Pregenerated sensors for PPP2CA-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000270177Ensembl transcript IDs: ENST00000602919.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGCGCAGCACTCCCCCGGTAGGTACACGCTCCTCCACCTACGAGTaGCCTAATTACAAGGTGCCAGCCGCGCCCAGAGGTGGGGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: LRSTPPVGTRSSTYE*PNYKVPAAPRGGGG Trigger: ACCACCCCCACCTCTGGGCGCGGCTGGCACCTTGTAATTAGGTCACTCGTAGGTGGAGGAGCGTGTACCTACCGGGGGAGTGCTGCGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CCA 90 bp | CTCACGCCACCGAGACGCGGTCAGGACAGGTGCATCCATCTTCTCTaGGCTTCCCCTCTTGAAAGTAGGCCAGGGCGCGCAGGGGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LTPPRRGQDRCIHLL*ASPLESRPGRAGVE Trigger: CTCAACCCCTGCGCGCCCTGGCCTACTTTCAAGAGGGGAAGCCCAGAGAAGATGGATGCACCTGTCCTGACCGCGTCTCGGTGGCGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 90 bp | AGCCGCGCCCAGAGGTGGGGGTGGTTAATCCAAGCGGCCACTCGCTaGCCGTTCCTGCCCCCAAAGATGACGGAAACCCACACGATTACA | + |
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Preference number: 5 (lower is better) Translates to: SRAQRWGWLIQAATR*PFLPPKMTETHTIT Trigger: TGTAATCGTGTGGGTTTCCGTCATCTTTGGGGGCAGGAACGGGCAGCGAGTGGCCGCTTGGATTAACCACCCCCACCTCTGGGCGCGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 90 bp | TGGCTGATGGGGCCTCCAGTGCCTTCTTCAGCCTGTTGGTGGGGATaGTGCCCTCAGAGCCGCAGAGTGAGCAGTCTCCTCCCAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: WLMGPPVPSSACWWG*CPQSRRVSSLLPSI Trigger: GATGCTTGGGAGGAGACTGCTCACTCTGCGGCTCTGAGGGCATCATCCCCACCAACAGGCTGAAGAAGGCACTGGAGGCCCCATCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 90 bp | AATTCTCGTTTCCGTGATCGGACTGCCAGGCCCCAGGTGAGGAGCTaGGTTCATCACCAGAGCGGCCTTCCCAGGGGAACCAGTTACAGG | + |
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Preference number: 5 (lower is better) Translates to: NSRFRDRTARPQVRS*VHHQSGLPRGTSYR Trigger: CCTGTAACTGGTTCCCCTGGGAAGGCCGCTCTGGTGATGAACTCAGCTCCTCACCTGGGGCCTGGCAGTCCGATCACGGAAACGAGAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 90 bp | CTTCTTCAGCCTGTTGGTGGGGATGATGCCCTCAGAGCCGCAGAGTaGGCAGTCTCCTCCCAAGCATCGCTGAGCACTTGGGTGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLQPVGGDDALRAAE*AVSSQASLSTWVWK Trigger: CTTCCACACCCAAGTGCTCAGCGATGCTTGGGAGGAGACTGCTCACTCTGCGGCTCTGAGGGCATCATCCCCACCAACAGGCTGAAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 90 bp | GTATCACAGCTGCTTCTCACGCCACCGAGACGCGGTCAGGACAGGTaGATCCATCTTCTCTGGGCTTCCCCTCTTGAAAGTAGGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: VSQLLLTPPRRGQDR*IHLLWASPLESRPG Trigger: CCCTGGCCTACTTTCAAGAGGGGAAGCCCAGAGAAGATGGATGCACCTGTCCTGACCGCGTCTCGGTGGCGTGAGAAGCAGCTGTGATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 90 bp | GCAGTCTCCTCCCAAGCATCGCTGAGCACTTGGGTGTGGAAGGGTTaGCTGATACTGAGGGTGGGGTTCCTGGAAGACAGGCGATCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AVSSQASLSTWVWKG*LILRVGFLEDRRSG Trigger: ACCTGATCGCCTGTCTTCCAGGAACCCCACCCTCAGTATCAGGCAACCCTTCCACACCCAAGTGCTCAGCGATGCTTGGGAGGAGACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CCA 90 bp | AGCCTAGGGAGGCCAAGCCAGTCGGCCTTGCCAAACACGTTGTCTTaGATAAAGGAGGATTTTCAGTCCTGCTATTGGCTGATGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: SLGRPSQSALPNTLS*IKEDFQSCYWLMGP Trigger: AGGCCCCATCAGCCAATAGCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGCCGACTGGCTTGGCCTCCCTAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 90 bp | AATCCTAGGGTATACGAGCTCTCTCTTTTAAGCACGTATCACAGCTaGTTCTCACGCCACCGAGACGCGGTCAGGACAGGTGCATCCATC | + |
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Preference number: 5 (lower is better) Translates to: NPRVYELSLLSTYHS*FSRHRDAVRTGASI Trigger: GATGGATGCACCTGTCCTGACCGCGTCTCGGTGGCGTGAGAAGCAGCTGTGATACGTGCTTAAAAGAGAGAGCTCGTATACCCTAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 90 bp | GCCTTGCCAAACACGTTGTCTTGGATAAAGGAGGATTTTCAGTCCTaGTATTGGCTGATGGGGCCTCCAGTGCCTTCTTCAGCCTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: ALPNTLSWIKEDFQS*YWLMGPPVPSSACW Trigger: CCAACAGGCTGAAGAAGGCACTGGAGGCCCCATCAGCCAATAGCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CCA 90 bp | GGTCCCTGGTCCGTCTGGATGACCCCTCCGGATCTGGCATATAGCTaGCGCTCTATGGAACCAGATATTTATGTAAAAGCAGGGACAATG | + |
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Preference number: 5 (lower is better) Translates to: GPWSVWMTPPDLAYS*RSMEPDIYVKAGTM Trigger: CATTGTCCCTGCTTTTACATAAATATCTGGTTCCATAGAGCGCCAGCTATATGCCAGATCCGGAGGGGTCATCCAGACGGACCAGGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 90 bp | TTTCTTTTGTGCACACTAATGGGAGGTGTGAAGGGAAAGCAGAATTaGAATTTCCAGCCTAGGGAGGCCAAGCCAGTCGGCCTTGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: FLLCTLMGGVKGKQN*NFQPREAKPVGLAK Trigger: TTTGGCAAGGCCGACTGGCTTGGCCTCCCTAGGCTGGAAATTGCAATTCTGCTTTCCCTTCACACCTCCCATTAGTGTGCACAAAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 90 bp | TGTTCTTTGGAAAGCTTCTATATCTTTCAAATCCTGGGGGCATTATaGTCTCTCTTCTGCCTATCCCAAACCATCTTCAGCCAGTACTGT | + |
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Preference number: 5 (lower is better) Translates to: CSLESFYIFQILGAL*SLFCLSQTIFSQYC Trigger: ACAGTACTGGCTGAAGATGGTTTGGGATAGGCAGAAGAGAGATCATAATGCCCCCAGGATTTGAAAGATATAGAAGCTTTCCAAAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 90 bp | CTCTATGGAACCAGATATTTATGTAAAAGCAGGGACAATGGAATGTaGAAACGTTTCGCAAACTCCAAAGCGATTCATAACCAGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: LYGTRYLCKSRDNGM*KRFANSKAIHNQTE Trigger: CTCTGTCTGGTTATGAATCGCTTTGGAGTTTGCGAAACGTTTTCACATTCCATTGTCCCTGCTTTTACATAAATATCTGGTTCCATAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 90 bp | TGTGATAAGACTTCTAGAAGAGTAGATTTAAGGTACTTTCTTTTGTaGACACTAATGGGAGGTGTGAAGGGAAAGCAGAATTGCAATTTC | + |
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Preference number: 5 (lower is better) Translates to: CDKTSRRVDLRYFLL*TLMGGVKGKQNCNF Trigger: GAAATTGCAATTCTGCTTTCCCTTCACACCTCCCATTAGTGTGCACAAAAGAAAGTACCTTAAATCTACTCTTCTAGAAGTCTTATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 72 bp | CGCCCGACGAGACACCTAGGTCCGGGGACGGGTGTGTaGCGCGGAAGTCAGGTGCACTGCGCAGCACTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RPTRHLGPGTGV*RGSQVHCAALP Trigger: GGGGAGTGCTGCGCAGTGCACCTGACTTCCGCGGCACACACCCGTCCCCGGACCTAGGTGTCTCGTCGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 72 bp | TTCCGTGATCGGACTGCCAGGCCCCAGGTGAGGAGCTaGGTTCATCACCAGAGCGGCCTTCCCAGGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: FRDRTARPQVRS*VHHQSGLPRGT Trigger: GGTTCCCCTGGGAAGGCCGCTCTGGTGATGAACTCAGCTCCTCACCTGGGGCCTGGCAGTCCGATCACGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | GGCGCGCAGGGGTTGAGGGTCTCTCATTCCCAGAGAGAATTAAACTaGGAGGAAAGCAACCACCGGCGAGGAGCGGGGCGCGTGGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: GAQGLRVSHSQRELN*EESNHRRGAGRVEA Trigger: CGCTTCCACGCGCCCCGCTCCTCGCCGGTGGTTGCTTTCCTCCAAGTTTAATTCTCTCTGGGAATGAGAGACCCTCAACCCCTGCGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 72 bp | GGGCCTCCAGTGCCTTCTTCAGCCTGTTGGTGGGGATaGTGCCCTCAGAGCCGCAGAGTGAGCAGTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GPPVPSSACWWG*CPQSRRVSSLL Trigger: GAGGAGACTGCTCACTCTGCGGCTCTGAGGGCATCATCCCCACCAACAGGCTGAAGAAGGCACTGGAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 72 bp | CAGAGGTGGGGGTGGTTAATCCAAGCGGCCACTCGCTaGCCGTTCCTGCCCCCAAAGATGACGGAAACCCAC | + |
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Preference number: 6 (lower is better) Translates to: QRWGWLIQAATR*PFLPPKMTETH Trigger: GTGGGTTTCCGTCATCTTTGGGGGCAGGAACGGGCAGCGAGTGGCCGCTTGGATTAACCACCCCCACCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | GACGCGGTCAGGACAGGTGCATCCATCTTCTCTGGGCTTCCCCTCTaGAAAGTAGGCCAGGGCGCGCAGGGGTTGAGGGTCTCTCATTCC | + |
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Preference number: 6 (lower is better) Translates to: DAVRTGASIFSGLPL*KVGQGAQGLRVSHS Trigger: GGAATGAGAGACCCTCAACCCCTGCGCGCCCTGGCCTACTTTCAAGAGGGGAAGCCCAGAGAAGATGGATGCACCTGTCCTGACCGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 72 bp | ACTCCCCCGGTAGGTACACGCTCCTCCACCTACGAGTaGCCTAATTACAAGGTGCCAGCCGCGCCCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: TPPVGTRSSTYE*PNYKVPAAPRG Trigger: ACCTCTGGGCGCGGCTGGCACCTTGTAATTAGGTCACTCGTAGGTGGAGGAGCGTGTACCTACCGGGGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | AGGACAGGTGCATCCATCTTCTCTGGGCTTCCCCTCTaGAAAGTAGGCCAGGGCGCGCAGGGGTTGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RTGASIFSGLPL*KVGQGAQGLRV Trigger: GACCCTCAACCCCTGCGCGCCCTGGCCTACTTTCAAGAGGGGAAGCCCAGAGAAGATGGATGCACCTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | CAGAGCCGCAGAGTGAGCAGTCTCCTCCCAAGCATCGCTGAGCACTaGGGTGTGGAAGGGTTGCCTGATACTGAGGGTGGGGTTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QSRRVSSLLPSIAEH*GVEGLPDTEGGVPG Trigger: TCCAGGAACCCCACCCTCAGTATCAGGCAACCCTTCCACACCCAAGTGCTCAGCGATGCTTGGGAGGAGACTGCTCACTCTGCGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | GTCCTGCTATTGGCTGATGGGGCCTCCAGTGCCTTCTTCAGCCTGTaGGTGGGGATGATGCCCTCAGAGCCGCAGAGTGAGCAGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLLLADGASSAFFSL*VGMMPSEPQSEQSP Trigger: AGGAGACTGCTCACTCTGCGGCTCTGAGGGCATCATCCCCACCAACAGGCTGAAGAAGGCACTGGAGGCCCCATCAGCCAATAGCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 72 bp | ATTCTCGTTTCCGTGATCGGACTGCCAGGCCCCAGGTaGGGAGCTGAGTTCATCACCAGAGCGGCCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ILVSVIGLPGPR*GAEFITRAAFP Trigger: TGGGAAGGCCGCTCTGGTGATGAACTCAGCTCCTCACCTGGGGCCTGGCAGTCCGATCACGGAAACGAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 72 bp | TACAAGCTCCAGGGCATGGTCCCTGGTCCGTCTGGATaGCCCCTCCGGATCTGGCATATAGCTGGCGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: YKLQGMVPGPSG*PLRIWHIAGAL Trigger: TAGAGCGCCAGCTATATGCCAGATCCGGAGGGGTCATCCAGACGGACCAGGGACCATGCCCTGGAGCTTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 72 bp | CACGCTCCTCCACCTACGAGTGACCTAATTACAAGGTaGCAGCCGCGCCCAGAGGTGGGGGTGGTTAATCCA | + |
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Preference number: 6 (lower is better) Translates to: HAPPPTSDLITR*QPRPEVGVVNP Trigger: TGGATTAACCACCCCCACCTCTGGGCGCGGCTGGCACCTTGTAATTAGGTCACTCGTAGGTGGAGGAGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CCA 72 bp | AGAATACAAGCTCCAGGGCATGGTCCCTGGTCCGTCTaGATGACCCCTCCGGATCTGGCATATAGCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RIQAPGHGPWSV*MTPPDLAYSWR Trigger: GCGCCAGCTATATGCCAGATCCGGAGGGGTCATCCAGACGGACCAGGGACCATGCCCTGGAGCTTGTATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CCA 72 bp | GCAGTCTCCTCCCAAGCATCGCTGAGCACTTGGGTGTaGAAGGGTTGCCTGATACTGAGGGTGGGGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: AVSSQASLSTWV*KGCLILRVGFL Trigger: CAGGAACCCCACCCTCAGTATCAGGCAACCCTTCCACACCCAAGTGCTCAGCGATGCTTGGGAGGAGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | AGCAGTCTCCTCCCAAGCATCGCTGAGCACTTGGGTGTGGAAGGGTaGCCTGATACTGAGGGTGGGGTTCCTGGAAGACAGGCGATCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSLLPSIAEHLGVEG*PDTEGGVPGRQAIR Trigger: CCTGATCGCCTGTCTTCCAGGAACCCCACCCTCAGTATCAGGCAACCCTTCCACACCCAAGTGCTCAGCGATGCTTGGGAGGAGACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 72 bp | TCCCAAGCATCGCTGAGCACTTGGGTGTGGAAGGGTTaGCTGATACTGAGGGTGGGGTTCCTGGAAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: SQASLSTWVWKG*LILRVGFLEDR Trigger: CCTGTCTTCCAGGAACCCCACCCTCAGTATCAGGCAACCCTTCCACACCCAAGTGCTCAGCGATGCTTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CCA 72 bp | AGCCAGTACTGTTGGGAGAATACAAGCTCCAGGGCATaGTCCCTGGTCCGTCTGGATGACCCCTCCGGATCT | + |
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Preference number: 6 (lower is better) Translates to: SQYCWENTSSRA*SLVRLDDPSGS Trigger: AGATCCGGAGGGGTCATCCAGACGGACCAGGGACCATGCCCTGGAGCTTGTATTCTCCCAACAGTACTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | GGGTTGAGGGTCTCTCATTCCCAGAGAGAATTAAACTaGGAGGAAAGCAACCACCGGCGAGGAGCGGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: GLRVSHSQRELN*EESNHRRGAGR Trigger: GCGCCCCGCTCCTCGCCGGTGGTTGCTTTCCTCCAAGTTTAATTCTCTCTGGGAATGAGAGACCCTCAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | CTCCCAAGCATCGCTGAGCACTTGGGTGTGGAAGGGTaGCCTGATACTGAGGGTGGGGTTCCTGGAAGACAG | + |
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Preference number: 6 (lower is better) Translates to: LPSIAEHLGVEG*PDTEGGVPGRQ Trigger: CTGTCTTCCAGGAACCCCACCCTCAGTATCAGGCAACCCTTCCACACCCAAGTGCTCAGCGATGCTTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | AGAGTGAGCAGTCTCCTCCCAAGCATCGCTGAGCACTaGGGTGTGGAAGGGTTGCCTGATACTGAGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RVSSLLPSIAEH*GVEGLPDTEGG Trigger: CCCACCCTCAGTATCAGGCAACCCTTCCACACCCAAGTGCTCAGCGATGCTTGGGAGGAGACTGCTCACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | CAGCCTAGGGAGGCCAAGCCAGTCGGCCTTGCCAAACACGTTGTCTaGGATAAAGGAGGATTTTCAGTCCTGCTATTGGCTGATGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QPREAKPVGLAKHVV*DKGGFSVLLLADGA Trigger: GGCCCCATCAGCCAATAGCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGCCGACTGGCTTGGCCTCCCTAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | TTCTCTGGGCTTCCCCTCTTGAAAGTAGGCCAGGGCGCGCAGGGGTaGAGGGTCTCTCATTCCCAGAGAGAATTAAACTTGGAGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FSGLPLLKVGQGAQG*RVSHSQRELNLEES Trigger: GCTTTCCTCCAAGTTTAATTCTCTCTGGGAATGAGAGACCCTCAACCCCTGCGCGCCCTGGCCTACTTTCAAGAGGGGAAGCCCAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 72 bp | GTATACGAGCTCTCTCTTTTAAGCACGTATCACAGCTaGTTCTCACGCCACCGAGACGCGGTCAGGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: VYELSLLSTYHS*FSRHRDAVRTG Trigger: ACCTGTCCTGACCGCGTCTCGGTGGCGTGAGAAGCAGCTGTGATACGTGCTTAAAAGAGAGAGCTCGTATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | CTTCCCCTCTTGAAAGTAGGCCAGGGCGCGCAGGGGTaGAGGGTCTCTCATTCCCAGAGAGAATTAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: LPLLKVGQGAQG*RVSHSQRELNL Trigger: CAAGTTTAATTCTCTCTGGGAATGAGAGACCCTCAACCCCTGCGCGCCCTGGCCTACTTTCAAGAGGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | GCCAAACACGTTGTCTTGGATAAAGGAGGATTTTCAGTCCTGCTATaGGCTGATGGGGCCTCCAGTGCCTTCTTCAGCCTGTTGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: AKHVVLDKGGFSVLL*ADGASSAFFSLLVG Trigger: CCCCACCAACAGGCTGAAGAAGGCACTGGAGGCCCCATCAGCCAATAGCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CCA 72 bp | TTCTGCCTATCCCAAACCATCTTCAGCCAGTACTGTTaGGAGAATACAAGCTCCAGGGCATGGTCCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FCLSQTIFSQYC*ENTSSRAWSLV Trigger: GACCAGGGACCATGCCCTGGAGCTTGTATTCTCCCAACAGTACTGGCTGAAGATGGTTTGGGATAGGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | CTTCTGCCTATCCCAAACCATCTTCAGCCAGTACTGTaGGGAGAATACAAGCTCCAGGGCATGGTCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLPIPNHLQPVL*GEYKLQGMVPG Trigger: ACCAGGGACCATGCCCTGGAGCTTGTATTCTCCCAACAGTACTGGCTGAAGATGGTTTGGGATAGGCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | ATGATCTCTCTTCTGCCTATCCCAAACCATCTTCAGCCAGTACTGTaGGGAGAATACAAGCTCCAGGGCATGGTCCCTGGTCCGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: MISLLPIPNHLQPVL*GEYKLQGMVPGPSG Trigger: TCCAGACGGACCAGGGACCATGCCCTGGAGCTTGTATTCTCCCAACAGTACTGGCTGAAGATGGTTTGGGATAGGCAGAAGAGAGATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | ATTTCCAGCCTAGGGAGGCCAAGCCAGTCGGCCTTGCCAAACACGTaGTCTTGGATAAAGGAGGATTTTCAGTCCTGCTATTGGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: ISSLGRPSQSALPNT*SWIKEDFQSCYWLM Trigger: CATCAGCCAATAGCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGCCGACTGGCTTGGCCTCCCTAGGCTGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | AGCAGAATTGCAATTTCCAGCCTAGGGAGGCCAAGCCAGTCGGCCTaGCCAAACACGTTGTCTTGGATAAAGGAGGATTTTCAGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRIAISSLGRPSQSA*PNTLSWIKEDFQSC Trigger: GCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGCCGACTGGCTTGGCCTCCCTAGGCTGGAAATTGCAATTCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CCA 72 bp | AGGCCAAGCCAGTCGGCCTTGCCAAACACGTTGTCTTaGATAAAGGAGGATTTTCAGTCCTGCTATTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RPSQSALPNTLS*IKEDFQSCYWL Trigger: CAGCCAATAGCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGCCGACTGGCTTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | GAGGCCAAGCCAGTCGGCCTTGCCAAACACGTTGTCTaGGATAAAGGAGGATTTTCAGTCCTGCTATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: EAKPVGLAKHVV*DKGGFSVLLLA Trigger: AGCCAATAGCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGCCGACTGGCTTGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | CTAGGGAGGCCAAGCCAGTCGGCCTTGCCAAACACGTaGTCTTGGATAAAGGAGGATTTTCAGTCCTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LGRPSQSALPNT*SWIKEDFQSCY Trigger: ATAGCAGGACTGAAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGCCGACTGGCTTGGCCTCCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 72 bp | GCAATTTCCAGCCTAGGGAGGCCAAGCCAGTCGGCCTaGCCAAACACGTTGTCTTGGATAAAGGAGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: AISSLGRPSQSA*PNTLSWIKEDF Trigger: AAAATCCTCCTTTATCCAAGACAACGTGTTTGGCAAGGCCGACTGGCTTGGCCTCCCTAGGCTGGAAATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS TCA 72 bp | GAAAGCTTCTATATCTTTCAAATCCTGGGGGCATTATaGTCTCTCTTCTGCCTATCCCAAACCATCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ESFYIFQILGAL*SLFCLSQTIFS Trigger: GCTGAAGATGGTTTGGGATAGGCAGAAGAGAGATCATAATGCCCCCAGGATTTGAAAGATATAGAAGCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS GCA 72 bp | TTAACTCTTACCCTTCTATTGTTTGGGGATGTTAACTaGAAAACAGGGACAGAATTTGGGCTAAAGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LTLTLLLFGDVN*KTGTEFGLKGL Trigger: AAGACCCTTTAGCCCAAATTCTGTCCCTGTTTTGCAGTTAACATCCCCAAACAATAGAAGGGTAAGAGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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| CDS CAA 90 bp | GTATGTGATAAGACTTCTAGAAGAGTAGATTTAAGGTACTTTCTTTaGTGCACACTAATGGGAGGTGTGAAGGGAAAGCAGAATTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: VCDKTSRRVDLRYFL*CTLMGGVKGKQNCN Trigger: ATTGCAATTCTGCTTTCCCTTCACACCTCCCATTAGTGTGCACAAAAGAAAGTACCTTAAATCTACTCTTCTAGAAGTCTTATCACATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602919.1 |
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