Pregenerated sensors for PPP2CA (Homo sapiens)
Ensembl gene IDs: ENSG00000113575Ensembl transcript IDs: ENST00000231504.5, ENST00000481195.6, ENST00000495833.1, ENST00000522385.1, ENST00000523082.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACATTCGGTATGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATaGTATAACTTCCCTGTTGGTTCCAGATTCAACACAGCACAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: TFGMYVFLKHFRKGI*YNFPVGSRFNTAQS Trigger: GCTTTGTGCTGTGTTGAATCTGGAACCAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACATACCGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATCTCCTGACATCAGGTaGTCCACCCACCCCGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPSPDIR*STHPGL Trigger: GAGGCCGGGGTGGGTGGATCACCTGATGTCAGGAGA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAGCAACCTCCATCTCCTaGGCTCAGGCGATCCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPATSIS*AQAILS Trigger: TGAGAGGATCGCCTGAGCCCAGGAGATGGAGGTTGC...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACAGGCTGGAGTGCAATaGCACGATCTGGGCTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPQAGVQ*HDLGSL Trigger: CAGTGAGCCCAGATCGTGCCATTGCACTCCAGCCTG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACTGCTCTTCAACTCCTaGCCTCAAGGGATCCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPLLFNS*PQGIHP Trigger: TGGGTGGATCCCTTGAGGTCAGGAGTTGAAGAGCAG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACAGAAACTGGTTTCTTaGCCAACAATGTCGCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPQKLVS*PTMSLQ Trigger: CTGAAGCGACATTGTTGGTCAAGAAACCAGTTTCTG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACATGGGGCTGAGATTTaGGTAGGGAATAAACTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPHGAEI*VGNKLS Trigger: ACTCAGTTTATTCCCTACTCAAATCTCAGCCCCATG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGACTGCAGTGCTCTTGTaGAGTCACATCGTCTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: CMCSSSILERGYAITSLLTAVLL*SHIVLQ Trigger: CTGTAAGACGATGTGACTGCACAAGAGCACTGCAGT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATGGTTCATTCTAAAGTaGTCACGGCTGTTGATGACA | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPWFILK*SRLLMT Trigger: TGTCATCAACAGCCGTGACCACTTTAGAATGAACCA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACGCTATGCCAGAAACTaGTTTCTTGACCAACAATGT | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPRYARN*FLDQQC Trigger: ACATTGTTGGTCAAGAAACCAGTTTCTGGCATAGCG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAACTCAACCCAAGACATaGGCACATCATGTACAAATT | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPTQPKT*AHHVQI Trigger: AATTTGTACATGATGTGCTCATGTCTTGGGTTGAGT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGGCTCCAATGATTGTTTaGTGCTATCCTTATCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: CMCSSSILERGYAITSLLAPMIV*CYPYLQ Trigger: CTGTAGATAAGGATAGCAGCAAACAATCATTGGAGC...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATTTAGAAAGGGGATATaGTATAACTTCCCTGTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPFRKGI*YNFPVG Trigger: ACCAACAGGGAAGTTATAGCATATCCCCTTTCTAAA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGTTCATTAAGCTCCAATaGTTGTTTGCTGCTATCCTT | + |
|
Preference number: 2 (lower is better) Translates to: CMCSSSILERGYAITSLLFIKLQ*LFAAIL Trigger: AAGGATAGCAGCAAACAATCATTGGAGCTTAATGAA...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGCTACACTCACAAGTATaGTTAAGTGTTCCTGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: CMCSSSILERGYAITSLLLHSQV*LSVPVY Trigger: GTAAACAGGAACACTTAATCATACTTGTGAGTGTAG...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGCCAATGATTGTTTGCTaGTATCCTTATCTACAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CMCSSSILERGYAITSLLPMIVC*YPYLQS Trigger: TGACTGTAGATAAGGATAGCAGCAAACAATCATTGG...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAAAACAGCACCAGTCTTaGCCATTGATACAATTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VRTKALMQNSFSSQNQNPKQHQS*PLIQLK Trigger: TTTTAATTGTATCAATGGGCAAGACTGGTGCTGTTT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGACAAACAAGTTAATATaGAGGAAGAACCCACAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: CMCSSSILERGYAITSLLTNKLI*RKNPQS Trigger: ACTTTGTGGGTTCTTCCTGCATATTAACTTGTTTGT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAAACACTGCAGTGCTCTaGTGCAGTCACATCGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VRTKALMQNSFSSQNQNPNTAVL*CSHIVL Trigger: TAAGACGATGTGACTGCACAAGAGCACTGCAGTGTT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGAAGTGGTCACGGCTGTaGATGACAAGAGGCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: CMCSSSILERGYAITSLLKWSRL*MTRGFV Trigger: TACAAAGCCTCTTGTCATCAACAGCCGTGACCACTT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAGCTATAACTTCCCTGTaGGTTCCAGATTCAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: VRTKALMQNSFSSQNQNPAITSL*VPDSTQ Trigger: CTGTGTTGAATCTGGAACCAACAGGGAAGTTATAGC...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGCCAGAAACTGGTTTCTaGACCAACAATGTCGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CMCSSSILERGYAITSLLPETGF*TNNVAS Trigger: TGAAGCGACATTGTTGGTCAAGAAACCAGTTTCTGG...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAAGCTCCAATGATTGTTaGCTGCTATCCTTATCTACA | + |
|
Preference number: 3 (lower is better) Translates to: VRTKALMQNSFSSQNQNPSSNDC*LLSLST Trigger: TGTAGATAAGGATAGCAGCAAACAATCATTGGAGCT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR GCA 72 bp | ATGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATaGTATAACTTCCCTGTTGGTTCCAGATTCAACACA | + |
|
Preference number: 3 (lower is better) Translates to: MYVFLKHFRKGI*YNFPVGSRFNT Trigger: TGTGTTGAATCTGGAACCAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGCACCAGTCTTGCCCATaGATACAATTAAAATTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CMCSSSILERGYAITSLLHQSCP*IQLKFD Trigger: GTCAAATTTTAATTGTATCAATGGGCAAGACTGGTG...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGTATCACTCAAAGAACTaGACACAGGCTAATGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: CMCSSSILERGYAITSLLYHSKN*TQANAL Trigger: TAAAGCATTAGCCTGTGTCAAGTTCTTTGAGTGATA...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR TCA 72 bp | GTCGCACGGTACATTTTAATTCCTTATCAACATCCATaGACCACCACCATGTATCCCAATTTTCTTAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: VARYILIPYQHP*TTTMYPNFLKY Trigger: ATACTTAAGAAAATTGGGATACATGGTGGTGGTTCATGGATGTTGATAAGGAATTAAAATGTACCGTGCGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR TCA 72 bp | ACAGCACCAGTCTTGCCCATTGATACAATTAAAATTTaGCCTTCTCAGTTCTTAGTTCACAAGTTTATTATG | + |
|
Preference number: 3 (lower is better) Translates to: TAPVLPIDTIKI*PSQFLVHKFIM Trigger: CATAATAAACTTGTGAACTAAGAACTGAGAAGGTCAAATTTTAATTGTATCAATGGGCAAGACTGGTGCTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR TCA 72 bp | AACACTGCCACTTTAAGTACCATTTTTGTCTTCGGGTaGATGTACATAAGACTAAATCATGATCCAACAATA | + |
|
Preference number: 3 (lower is better) Translates to: NTATLSTIFVFG*MYIRLNHDPTI Trigger: TATTGTTGGATCATGATTTAGTCTTATGTACATTCACCCGAAGACAAAAATGGTACTTAAAGTGGCAGTGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAACTTCTGGCGGCTGTTaGGGCTGGCGCTGGCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPTSGGC*GWRWPA Trigger: AGCGGGCCAGCGCCAGCCTCAACAGCCGCCAGAAGT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACTGGCGCTGGCCCGCTaGCTCTCACCGCAGTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPLALAR*LSPQYS Trigger: CGAGTACTGCGGTGAGAGCCAGCGGGCCAGCGCCAG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGTCCTCCTCCGCTCGCTaGGGCTCCAGAGCTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLSSSAR*GSRARL Trigger: GAGCCGAGCTCTGGAGCCTCAGCGAGCGGAGGAGGA...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGACACCTTCTCGTCCATaGTGCCACCCGCCCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLTPSRP*CHPPQP Trigger: CGGCTGGGGCGGGTGGCATCATGGACGAGAAGGTGT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACCACGCTGGCCAGGCTaGTCTCGATCTCCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPPRWPG*SRSPDI Trigger: GATGTCAGGAGATCGAGACCAGCCTGGCCAGCGTGG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATTCCTCGTGTACTTCTaGCGGCTGTTGAGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPFLVYF*RLLRLA Trigger: CGCCAGCCTCAACAGCCGCCAGAAGTACACGAGGAA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGTGGGACTCGGACAGCTaGTTGCACTCGTTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLWDSDS*LHSFSC Trigger: GCAGCTGAACGAGTGCAAGCAGCTGTCCGAGTCCCA...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGTTGCCCAGGCTGGAGTaGAATGGCACGATCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLLPRLE*NGTIWA Trigger: AGCCCAGATCGTGCCATTGCACTCCAGCCTGGGCAA...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAAGCCTCCCAAGTAGCTaGGATTACAGGCTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPSLPSS*DYRLLP Trigger: TGGCAGGAGCCTGTAATCCCAGCTACTTGGGAGGCT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACTCGCCTCTACGAGGTaGTGGGTCAAACTGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPLASTR*WVKLQE Trigger: TTCTTGCAGTTTGACCCAGCACCTCGTAGAGGCGAG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGACAATCTCAGCCCACTaGAACCTCCATCTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLTISAH*NLHLLG Trigger: GCCCAGGAGATGGAGGTTGCAGTGGGCTGAGATTGT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGGGGATTACAGGCTCCTaGCACCACACCGGTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLGITGS*HHTGQF Trigger: AAACTGACCGGTGTGGTGGCAGGAGCCTGTAATCCC...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATCCCTCGAAGAATGGTaGTGCGTTCACGGTAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPSLEEW*CVHGNE Trigger: TTCGTTACCGTGAACGCATCACCATTCTTCGAGGGA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAGGTAAAAGTCACCACTaGAACAGAGAGTCGCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPGKSHH*NRESHG Trigger: ACCGTGCGACTCTCTGTTTCAGTGGTGACTTTTACC...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATGTAGACAGAAGATCTaGCCATCCACCAAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPCRQKI*PSTKAV Trigger: CACTGCCTTGGTGGATGGGCAGATCTTCTGTCTACA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACAGCAAGTCACACATTaGACCCTCATGGGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPQQVTH*TLMGNF Trigger: GAAGTTCCCCATGAGGGTCCAATGTGTGACTTGCTG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAACTACATTCCGGTCATaGCACCAGTTATATCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPTTFRS*HQLYPS Trigger: GGAGGGATATAACTGGTGCCATGACCGGAATGTAGT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGGCCTCTACGAGGTGCTaGGTCAAACTGCAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLASTRC*VKLQER Trigger: TCTTTCTTGCAGTTTGACCCAGCACCTCGTAGAGGC...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAACTTTCCAGTTTAGATaGCCAAAGCCCGGTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPTFQFR*PKPGQS Trigger: AGACTGACCGGGCTTTGGCCATCTAAACTGGAAAGT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| 3UTR CAA 72 bp | GTAACTACAAATAGCGCTATGCCAGAAACTGGTTTCTaGACCAACAATGTCGCTTCAGCATGCAATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VTTNSAMPETGF*TNNVASACNEL Trigger: CAGTTCATTGCATGCTGAAGCGACATTGTTGGTCAAGAAACCAGTTTCTGGCATAGCGCTATTTGTAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATATCGTCAAGTTCCATaGTTGCAGCTTGGTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPYRQVP*LQLGYH Trigger: GTGGTAACCAAGCTGCAATCATGGAACTTGACGATA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGCATCCACCAAGGCAGTaGGAGGAAGATAGTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLHPPRQ*EEDSQK Trigger: TTTTTGACTATCTTCCTCTCACTGCCTTGGTGGATG...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGCATGGGGCTGAGATTTaGGTAGGGAATAAACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLHGAEI*VGNKLS Trigger: ACTCAGTTTATTCCCTACTCAAATCTCAGCCCCATG...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGTTCCTTGGTCAATTCTaGTATCACAGGACCGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLFLGQF*YHRTGK Trigger: TTTTCCGGTCCTGTGATATCAGAATTGACCAAGGAA...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAGCTCCAATGATTGTTTaGTGCTATCCTTATCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPAPMIV*CYPYLQ Trigger: CTGTAGATAAGGATAGCAGCAAACAATCATTGGAGC...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGCGCTATGCCAGAAACTaGTTTCTTGACCAACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLRYARN*FLDQQC Trigger: ACATTGTTGGTCAAGAAACCAGTTTCTGGCATAGCG...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATCAAGTGCTCTGATATaGTCCAGTGTATCTATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPSSALI*SSVSID Trigger: ATCTATAGATACACTGGATCATATCAGAGCACTTGA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATTCATTAAGCTCCAATaGTTGTTTGCTGCTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPFIKLQ*LFAAIL Trigger: AAGGATAGCAGCAAACAATCATTGGAGCTTAATGAA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACTACACTCACAAGTATaGTTAAGTGTTCCTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPLHSQV*LSVPVY Trigger: GTAAACAGGAACACTTAATCATACTTGTGAGTGTAG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGGGTGCTGGGTCAAACTaGAAGAAAGAGTATTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLGAGSN*KKEYFR Trigger: TCTAAAATACTCTTTCTTGCAGTTTGACCCAGCACC...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR GCA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAACAAACAAGTTAATATaGAGGAAGAACCCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRTKALMQNSFSSQNQNPTNKLI*RKNPQS Trigger: ACTTTGTGGGTTCTTCCTGCATATTAACTTGTTTGT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGAATGGCCTTTTGCTTTaGAAAATTAACTCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLNGLLL*KINSTS Trigger: GCTTGTGGAGTTAATTTTCCAAAGCAAAAGGCCATT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CCA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGACGATAACAATAGTTTaGAGCACTGAAAATCGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CMCSSSILERGYAITSLLTITIV*STENRY Trigger: GTAACGATTTTCAGTGCTCCAAACTATTGTTATCGT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS CCA 90 bp | TTCCTCGTGTACTTCTGGCGGCTGTTGAGGCTGGCGCTGGCCCGCTaGCTCTCACCGCAGTACTCGGCCGTCGGCCGCTGCGCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLVYFWRLLRLALAR*LSPQYSAVGRCASS Trigger: GGAGGAGGCGCAGCGGCCGACGGCCGAGTACTGCGGTGAGAGCCAGCGGGCCAGCGCCAGCCTCAACAGCCGCCAGAAGTACACGAGGAA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231504.5 ENST00000481195.6 |
||
| CDS CCA 90 bp | CCTGACGATGACCCACAGGGTCTCCGCTCCCCCTGCCACCTCGTCTaGCGCCAAGGCCGGCTGACTCAAAAGCCCAGGAGTCGAGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PDDDPQGLRSPCHLV*RQGRLTQKPRSRVN Trigger: GTTCACTCGACTCCTGGGCTTTTGAGTCAGCCGGCCTTGGCGCCAGACGAGGTGGCAGGGGGAGCGGAGACCCTGTGGGTCATCGTCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522385.1 |
||
| CDS-3UTR CAA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGTACTTCTGGCGGCTGTaGAGGCTGGCGCTGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CMCSSSILERGYAITSLLYFWRL*RLALAR Trigger: GCGGGCCAGCGCCAGCCTCAACAGCCGCCAGAAGTA...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS GCA 90 bp | CAATCCAGTTTTAGAACCTTTCCATTATCCCAAAAAGATCCCTCCTaGAGTCACTCTCCACTCCCACTCCAGCTCCTGGCAACCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSSFRTFPLSQKDPS*SHSPLPLQLLATTD Trigger: ATCAGTGGTTGCCAGGAGCTGGAGTGGGAGTGGAGAGTGACTGCAGGAGGGATCTTTTTGGGATAATGGAAAGGTTCTAAAACTGGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000495833.1 |
||
| CDS CCA 90 bp | AAAAAGATCCCTCCTGCAGTCACTCTCCACTCCCACTCCAGCTCCTaGCAACCACTGATTTACTGTCTTGAGTTTGTCTTTTCTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KKIPPAVTLHSHSSS*QPLIYCLEFVFSRN Trigger: ATTTCTAGAAAAGACAAACTCAAGACAGTAAATCAGTGGTTGCCAGGAGCTGGAGTGGGAGTGGAGAGTGACTGCAGGAGGGATCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000495833.1 |
||
| CDS TCA 90 bp | CTCCTGCAGTCACTCTCCACTCCCACTCCAGCTCCTGGCAACCACTaGTTTACTGTCTTGAGTTTGTCTTTTCTAGAAATGTCATATAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLQSLSTPTPAPGNH*FTVLSLSFLEMSYK Trigger: TTTATATGACATTTCTAGAAAAGACAAACTCAAGACAGTAAATCAGTGGTTGCCAGGAGCTGGAGTGGGAGTGGAGAGTGACTGCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495833.1 |
||
| CDS TCA 90 bp | AGGAGATTCAATACATCGCTACCATTAAAAGGCATCTCCAACAGATaGTGTGCCACCTCATCCACTAGTAGTAGTTTTGTTCAGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRFNTSLPLKGISNR*CATSSTSSSFVQAW Trigger: CCAAGCCTGAACAAAACTACTACTAGTGGATGAGGTGGCACATCATCTGTTGGAGATGCCTTTTAATGGTAGCGATGTATTGAATCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523082.1 |
||
| CDS-3UTR CAA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGACAGCAAGTCACACATaGGACCCTCATGGGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: CMCSSSILERGYAITSLLTASHT*DPHGEL Trigger: AAGTTCCCCATGAGGGTCCAATGTGTGACTTGCTGT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CAA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCAACATGGATAAGCTATTaGTTCAGTCGGAGAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRTKALMQNSFSSQNQNPTWISY*FSRRER Trigger: CCTTTCTCTCCGACTGAACAAATAGCTTATCCATGT...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CAA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGATAGAAACCATAAACTaGTGTGATCTGTCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CMCSSSILERGYAITSLLIETIN*CDLSAL Trigger: GAGAGCAGACAGATCACACAAGTTTATGGTTTCTAT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CAA 90 bp | TGTATGTGTTCCTCAAGCATTTTAGAAAGGGGATATGCTATAACTTCCCTGTTGAGCTCCAATGATTGTTaGCTGCTATCCTTATCTACA | + |
|
Preference number: 5 (lower is better) Translates to: CMCSSSILERGYAITSLLSSNDC*LLSLST Trigger: TGTAGATAAGGATAGCAGCAAACAATCATTGGAGCT...CAACAGGGAAGTTATAGCATATCCCCTTTCTAAAATGCTTGAGGAACACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CAA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCATATCACTCAAAGAACTaGACACAGGCTAATGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VRTKALMQNSFSSQNQNPYHSKN*TQANAL Trigger: TAAAGCATTAGCCTGTGTCAAGTTCTTTGAGTGATA...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS-3UTR CAA 90 bp | GTGAGGACGAAGGCTTTAATGCAAAATAGCTTTAGCTCACAGAACCAAAATCCACAAAATTTAGAGAATTaGTACCTGGAAGATACCACC | + |
|
Preference number: 5 (lower is better) Translates to: VRTKALMQNSFSSQNQNPQNLEN*YLEDTT Trigger: GGTGGTATCTTCCAGGTACAAATTCTCTAAATTTTG...TGGATTTTGGTTCTGTGAGCTAAAGCTATTTTGCATTAAAGCCTTCGTCCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481195.6 |
||
| CDS CCA 72 bp | TACTTCTGGCGGCTGTTGAGGCTGGCGCTGGCCCGCTaGCTCTCACCGCAGTACTCGGCCGTCGGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YFWRLLRLALAR*LSPQYSAVGRC Trigger: GCAGCGGCCGACGGCCGAGTACTGCGGTGAGAGCCAGCGGGCCAGCGCCAGCCTCAACAGCCGCCAGAAGTA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231504.5 ENST00000481195.6 |
||
| CDS GCA 72 bp | GTCCCTGACGATGACCCACAGGGTCTCCGCTCCCCCTaGCACCTCGTCTGGCGCCAAGGCCGGCTGACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VPDDDPQGLRSP*HLVWRQGRLTQ Trigger: TTGAGTCAGCCGGCCTTGGCGCCAGACGAGGTGGCAGGGGGAGCGGAGACCCTGTGGGTCATCGTCAGGGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522385.1 |
||
| CDS CCA 72 bp | GACCCACAGGGTCTCCGCTCCCCCTGCCACCTCGTCTaGCGCCAAGGCCGGCTGACTCAAAAGCCCAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: DPQGLRSPCHLV*RQGRLTQKPRS Trigger: ACTCCTGGGCTTTTGAGTCAGCCGGCCTTGGCGCCAGACGAGGTGGCAGGGGGAGCGGAGACCCTGTGGGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522385.1 |
||
| CDS CCA 72 bp | CCTCCTGCAGTCACTCTCCACTCCCACTCCAGCTCCTaGCAACCACTGATTTACTGTCTTGAGTTTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PPAVTLHSHSSS*QPLIYCLEFVF Trigger: AAAGACAAACTCAAGACAGTAAATCAGTGGTTGCCAGGAGCTGGAGTGGGAGTGGAGAGTGACTGCAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495833.1 |
||
| CDS TCA 72 bp | TCACTCTCCACTCCCACTCCAGCTCCTGGCAACCACTaGTTTACTGTCTTGAGTTTGTCTTTTCTAGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: SLSTPTPAPGNH*FTVLSLSFLEM Trigger: CATTTCTAGAAAAGACAAACTCAAGACAGTAAATCAGTGGTTGCCAGGAGCTGGAGTGGGAGTGGAGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495833.1 |
||
| CDS TCA 72 bp | AATACATCGCTACCATTAAAAGGCATCTCCAACAGATaGTGTGCCACCTCATCCACTAGTAGTAGTTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: NTSLPLKGISNR*CATSSTSSSFV Trigger: AACAAAACTACTACTAGTGGATGAGGTGGCACATCATCTGTTGGAGATGCCTTTTAATGGTAGCGATGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523082.1 |
||