RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R9A (Homo sapiens)

Ensembl gene IDs: ENSG00000158528

Ensembl transcript IDs: ENST00000289495.7, ENST00000340694.8, ENST00000413325.1, ENST00000422324.1, ENST00000424654.5, ENST00000433360.6, ENST00000433881.5, ENST00000456331.6

Found 1119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACGGCGCTCCATTAACAACACCAGGGTGTGTCATGCTCTTGGGTaGGGTCACACTAGTTCTCCAAGTGACAAAACACACCCAACACAA +
Preference number: 1 (lower is better)
Translates to: SRRSINNTRVCHALG*GHTSSPSDKTHPTQ
Trigger: TTGTGTTGGGTGTGTTTTGTCACTTGGAGAACTAGTGTGACCCCACCCAAGAGCATGACACACCCTGGTGTTGTTAATGGAGCGCCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 90 bp TTCCCACACATTGGAGTAGGTGTTGCAGTCCTAGAAGTTAAGTACTaGTCTCAGATCTCATGGCAGGGTGCTCTCTGCCATGCAGACATG +
Preference number: 1 (lower is better)
Translates to: FPHIGVGVAVLEVKY*SQISWQGALCHADM
Trigger: CATGTCTGCATGGCAGAGAGCACCCTGCCATGAGATCTGAGACCAGTACTTAACTTCTAGGACTGCAACACCTACTCCAATGTGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 90 bp GTAGGTGTTGCAGTCCTAGAAGTTAAGTACTGGTCTCAGATCTCATaGCAGGGTGCTCTCTGCCATGCAGACATGTGCAATTGCCATTTC +
Preference number: 1 (lower is better)
Translates to: VGVAVLEVKYWSQIS*QGALCHADMCNCHF
Trigger: GAAATGGCAATTGCACATGTCTGCATGGCAGAGAGCACCCTGCCATGAGATCTGAGACCAGTACTTAACTTCTAGGACTGCAACACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 90 bp CTTTCCTTCTCCACTCTTGAGGATCTGGAATCAGGTCACAGACTGTaGTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACC +
Preference number: 1 (lower is better)
Translates to: LSFSTLEDLESGHRL*WVHTLTYVNLQVTT
Trigger: GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTGACCTGATTCCAGATCCTCAAGAGTGGAGAAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 90 bp GAGCCATTCAATGTATACACAACGCAAGAAGTGGCAATAAGGCTATaGTTACAGCTCCAGGTCCTGACTGACCTCGCCAAGTTCCATACA +
Preference number: 1 (lower is better)
Translates to: EPFNVYTTQEVAIRL*LQLQVLTDLAKFHT
Trigger: TGTATGGAACTTGGCGAGGTCAGTCAGGACCTGGAGCTGTAATCATAGCCTTATTGCCACTTCTTGCGTTGTGTATACATTGAATGGCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 90 bp TCCTTCTCCACTCTTGAGGATCTGGAATCAGGTCACAGACTGTGCTaGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCATT +
Preference number: 1 (lower is better)
Translates to: SFSTLEDLESGHRLC*VHTLTYVNLQVTTI
Trigger: AATGGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTGACCTGATTCCAGATCCTCAAGAGTGGAGAAGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 90 bp TGGGGCTACAAGGGAGTTCCCTTAATCTGTTACACTCAAAAGCCTTaGCGAGGCTCTAAATATGGAATACTTCTAGTGGAAGATACGAGA +
Preference number: 1 (lower is better)
Translates to: WGYKGVPLICYTQKP*RGSKYGILLVEDTR
Trigger: TCTCGTATCTTCCACTAGAAGTATTCCATATTTAGAGCCTCGGCAAGGCTTTTGAGTGTAACAGATTAAGGGAACTCCCTTGTAGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 90 bp CGGCTTTCTCTTTGCCCCTCCAACTTCTTAGTTGGGCCTATTCTATaGTGCTACTTCAAGTTACTCAAATGTGTTTTGTCTGGTGTTATT +
Preference number: 1 (lower is better)
Translates to: RLSLCPSNFLVGPIL*CYFKLLKCVLSGVI
Trigger: AATAACACCAGACAAAACACATTTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAGGGGCAAAGAGAAAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 90 bp AAGCTGATTCTGTCGGCTTTCTCTTTGCCCCTCCAACTTCTTAGTTaGGCCTATTCTATGCTGCTACTTCAAGTTACTCAAATGTGTTTT +
Preference number: 1 (lower is better)
Translates to: KLILSAFSLPLQLLS*AYSMLLLQVTQMCF
Trigger: AAAACACATTTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAGGGGCAAAGAGAAAGCCGACAGAATCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 90 bp TTGAGAAGTTATCTGTTCTCTTATTGCATACATCTTACTCACTGTTaGATCCCTAGCAGTTTTGGGGTTGGGTTAGGGTCAAGCATAGGA +
Preference number: 1 (lower is better)
Translates to: LRSYLFSYCIHLTHC*IPSSFGVGLGSSIG
Trigger: TCCTATGCTTGACCCTAACCCAACCCCAAAACTGCTAGGGATTCAACAGTGAGTAAGATGTATGCAATAAGAGAACAGATAACTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 90 bp TGCCGAGGCTCTAAATATGGAATACTTCTAGTGGAAGATACGAGATaGTGGGAACAGAGCAGAGATTCCCATAAAGTAAAAGAAGTAAAA +
Preference number: 1 (lower is better)
Translates to: CRGSKYGILLVEDTR*WEQSRDSHKVKEVK
Trigger: TTTTACTTCTTTTACTTTATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCCATATTTAGAGCCTCGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 90 bp CGAGGCTCTAAATATGGAATACTTCTAGTGGAAGATACGAGATGCTaGGAACAGAGCAGAGATTCCCATAAAGTAAAAGAAGTAAAATAC +
Preference number: 1 (lower is better)
Translates to: RGSKYGILLVEDTRC*EQSRDSHKVKEVKY
Trigger: GTATTTTACTTCTTTTACTTTATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCCATATTTAGAGCCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 90 bp CAAGATGTTGGTAAGTTAGAGAAGAGCAAAACACAGCTACTTAAATaGAATCTCTGGTTTGTTAATGAACCAAAGGTGGCTTGGGATTAT +
Preference number: 1 (lower is better)
Translates to: QDVGKLEKSKTQLLK*NLWFVNEPKVAWDY
Trigger: ATAATCCCAAGCCACCTTTGGTTCATTAACAAACCAGAGATTTCATTTAAGTAGCTGTGTTTTGCTCTTCTCTAACTTACCAACATCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 90 bp ACTTTGATAACTGTAAAACACAATGTTACTTCATGTCAACGTTTCTaGGGATTGAATGAAGGGTCTGTACCTAATGACAAAAGAGCTGAC +
Preference number: 1 (lower is better)
Translates to: TLITVKHNVTSCQRF*GLNEGSVPNDKRAD
Trigger: GTCAGCTCTTTTGTCATTAGGTACAGACCCTTCATTCAATCCTCAGAAACGTTGACATGAAGTAACATTGTGTTTTACAGTTATCAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 90 bp CACATATGTAGTTCTGAACATCTACACAAACGGCATGCACATTGTTaGGAAGTTATCTGTTCTCTTATTGCATACATCTTACTCACTGTT +
Preference number: 1 (lower is better)
Translates to: HICSSEHLHKRHAHC*EVICSLIAYILLTV
Trigger: AACAGTGAGTAAGATGTATGCAATAAGAGAACAGATAACTTCTCAACAATGTGCATGCCGTTTGTGTAGATGTTCAGAACTACATATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 90 bp GCTGCATACATTTCTTCTGAGCTCCAACTCAGCAATATGCAATCTTaGCATCAAAGCATTAGCCAAATATTTGAGGAAATTTTCTTACTA +
Preference number: 1 (lower is better)
Translates to: AAYISSELQLSNMQS*HQSISQIFEEIFLL
Trigger: TAGTAAGAAAATTTCCTCAAATATTTGGCTAATGCTTTGATGTCAAGATTGCATATTGCTGAGTTGGAGCTCAGAAGAAATGTATGCAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGATCTCATGGCAGGGTaGTCTCTGCCATGCAGACAT +
Preference number: 2 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSDLMAG*SLPCRH
Trigger: ATGTCTGCATGGCAGAGAGCACCCTGCCATGAGATC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCAGGGCAGGAAGAGGTaGGGACTTCTCTTGGAGCAT +
Preference number: 2 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVQGRKR*GLLLEH
Trigger: ATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCTG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCACCAGGGTGTGTCATaGTCTTGGGTGGGGTCACAC +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTHQGVS*SWVGSH
Trigger: GTGTGACCCCACCCAAGAGCATGACACACCCTGGTG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGAAGATACGAGATGCTaGGAACAGAGCAGAGATTCC +
Preference number: 2 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSEDTRC*EQSRDS
Trigger: GGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CAA 90 bp TCAGATCTCATGGCAGGGTGCTCTCTGCCATGCAGACATGTGCAATaGCCATTTCAGGATCCCACACTGAAAATTCACGGCGCTCCATTA +
Preference number: 2 (lower is better)
Translates to: SDLMAGCSLPCRHVQ*PFQDPTLKIHGAPL
Trigger: TAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTGAAATGGCAATTGCACATGTCTGCATGGCAGAGAGCACCCTGCCATGAGATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCCAGTCTCCTGCACTTaGCTTAGTTTGGTGAAACAT +
Preference number: 2 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSPVSCT*LSLVKH
Trigger: ATGTTTCACCAAACTAAGTCAAGTGCAGGAGACTGG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTGGCAGGGTGCTCTCTaGCATGCAGACATGTGCAAT +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTWQGAL*HADMCN
Trigger: ATTGCACATGTCTGCATGGCAGAGAGCACCCTGCCA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTGGTCTCAGATCTCATaGCAGGGTGCTCTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTWSQIS*QGALCH
Trigger: ATGGCAGAGAGCACCCTGCCATGAGATCTGAGACCA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTAGTCCCAGCTACTTaGGAAGCTGAAGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVVPAT*EAEAGG
Trigger: TCCTCCTGCTTCAGCTTCCCAAGTAGCTGGGACTAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTATGGATGTTTTGGCTaGGGGTGGTGGCACATGCCT +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTYGCFG*GWWHMP
Trigger: AGGCATGTGCCACCACCCCCAGCCAAAACATCCATA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCACAATACTCTGGCAATaGAAAGAAAACAGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSTILWQ*KENRPW
Trigger: CCAAGGCCTGTTTTCTTTTCATTGCCAGAGTATTGT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCACCAGGGTGTGTCATaGTCTTGGGTGGGGTCACAC +
Preference number: 2 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGHQGVS*SWVGSH
Trigger: GTGTGACCCCACCCAAGAGCATGACACACCCTGGTG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGATCTCATGGCAGGGTaGTCTCTGCCATGCAGACAT +
Preference number: 2 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHDLMAG*SLPCRH
Trigger: ATGTCTGCATGGCAGAGAGCACCCTGCCATGAGATC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTACACTCAAAAGCCTTaGCGAGGCTCTAAATATGGA +
Preference number: 2 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSYTQKP*RGSKYG
Trigger: TCCATATTTAGAGCCTCGGCAAGGCTTTTGAGTGTA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTGTCATGCTCTTGGGTaGGGTCACACTAGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTCHALG*GHTSSP
Trigger: TGGAGAACTAGTGTGACCCCACCCAAGAGCATGACA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTGGTCTCAGATCTCATaGCAGGGTGCTCTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHWSQIS*QGALCH
Trigger: ATGGCAGAGAGCACCCTGCCATGAGATCTGAGACCA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTAACTGAGCCCACCTaGGAAATCTTGAGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLTEPT*EILSRK
Trigger: TTTTCTACTCAAGATTTCCCAGGTGGGCTCAGTTAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTTCTGTCTGCAGCTTaGCCTCCTCACCACACATTC +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFLSAA*PPHHTF
Trigger: GAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTCAGGATCCCACACTaGAAATTCACGGCGCTCCAT +
Preference number: 2 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHFRIPH*KFTALH
Trigger: ATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTGAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTTTGCCAGTGTTGCTaGAATGCTGAACACACAGCA +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVCQCC*NAEHTA
Trigger: TGCTGTGTGTTCAGCATTTCAGCAACACTGGCAAAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCCTCAAGTCTTATTCTaGAACTTGTCCTTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSPQVLF*NLSFGK
Trigger: CTTTCCAAAGGACAAGTTTCAGAATAAGACTTGAGG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCTTTCCAGGAGAAGCTaGTTCTGTCGGCTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTLSRRS*FCRLSL
Trigger: AAGAGAAAGCCGACAGAATCAGCTTCTCCTGGAAAG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCACTGCAGTCCAGTCTaGGTGACAGATGACAGAAAA +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTHCSPV*VTDDRK
Trigger: TTTTCTGTCATCTGTCACCCAGACTGGACTGCAGTG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGTTTGCCAGTGTTGCTaGAATGCTGAACACACAGCA +
Preference number: 2 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHVCQCC*NAEHTA
Trigger: TGCTGTGTGTTCAGCATTTCAGCAACACTGGCAAAC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGATCTCATGGCAGGGTaGTCTCTGCCATGCAGACAT +
Preference number: 2 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGDLMAG*SLPCRH
Trigger: ATGTCTGCATGGCAGAGAGCACCCTGCCATGAGATC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTATCCAAAGTATAGATaGTTCTCTCAGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTYPKYR*FSQGCW
Trigger: CCAGCAGCCCTGAGAGAACCATCTATACTTTGGATA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAACACTACTTTCTTTTaGGAATGTACAGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTNTTFF*ECTALP
Trigger: GGGGAGGGCTGTACATTCCCAAAAGAAAGTAGTGTT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCCAGTCTCCTGCACTTaGCTTAGTTTGGTGAAACAT +
Preference number: 2 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHPVSCT*LSLVKH
Trigger: ATGTTTCACCAAACTAAGTCAAGTGCAGGAGACTGG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCACAATACTCTGGCAATaGAAAGAAAACAGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTTILWQ*KENRPW
Trigger: CCAAGGCCTGTTTTCTTTTCATTGCCAGAGTATTGT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTGCCATGCAGACATGTaGAATTGCCATTTCAGGATC +
Preference number: 2 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHCHADM*NCHFRI
Trigger: GATCCTGAAATGGCAATTGCACATGTCTGCATGGCA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCATACAGCTCATACAATaGTTTCTGTCTGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTIQLIQ*FLSAAW
Trigger: CCAAGCTGCAGACAGAAAGCATTGTATGAGCTGTAT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACAGGGCAGGAAGAGGTaGGGACTTCTCTTGGAGCAT +
Preference number: 2 (lower is better)
Translates to: LSFGKWITSFLESTQQREQGRKR*GLLLEH
Trigger: ATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCTG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTGTCATGCTCTTGGGTaGGGTCACACTAGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGCHALG*GHTSSP
Trigger: TGGAGAACTAGTGTGACCCCACCCAAGAGCATGACA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCTAGAAGTTAAGTACTaGTCTCAGATCTCATGGCAG +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTLEVKY*SQISWQ
Trigger: CTGCCATGAGATCTGAGACCAGTACTTAACTTCTAG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAAGTATGGAAAGGAATaGTTCGGAAAAACCATTCAA +
Preference number: 2 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSKYGKE*FGKTIQ
Trigger: TTGAATGGTTTTTCCGAACCATTCCTTTCCATACTT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCCTCAAGTCTTATTCTaGAACTTGTCCTTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTPQVLF*NLSFGK
Trigger: CTTTCCAAAGGACAAGTTTCAGAATAAGACTTGAGG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTCAGGATCCCACACTaGAAATTCACGGCGCTCCAT +
Preference number: 2 (lower is better)
Translates to: LSFGKWITSFLESTQQREFRIPH*KFTALH
Trigger: ATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTGAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTCAGGATCCCACACTaGAAATTCACGGCGCTCCAT +
Preference number: 2 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKFRIPH*KFTALH
Trigger: ATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTGAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGGCAATCAAACCAAATaGCTTTTACAATTTCATCCG +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTGNQTK*LLQFHP
Trigger: CGGATGAAATTGTAAAAGTCATTTGGTTTGATTGCC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATGTCATGCTCTTGGGTaGGGTCACACTAGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: LSFGKWITSFLESTQQRECHALG*GHTSSP
Trigger: TGGAGAACTAGTGTGACCCCACCCAAGAGCATGACA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCTGAAACTTGTCCTTTaGAAAGTGGATAACCTCATT +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTLKLVL*KVDNLI
Trigger: AATGAGGTTATCCACTTTCCAAAGGACAAGTTTCAG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CAA 90 bp TCCAACAACAATGGAGCAAAAGGTGACAGTCCCATTTTGTGCCAGTaGAAAGCTGAGTTTGGCTTTAGTACCTATCATACTGCAATCATG +
Preference number: 2 (lower is better)
Translates to: SNNNGAKGDSPILCQ*KAEFGFSTYHTAIM
Trigger: CATGATTGCAGTATGATAGGTACTAAAGCCAAACTCAGCTTTCAACTGGCACAAAATGGGACTGTCACCTTTTGCTCCATTGTTGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAATTTTCTCCTTCTTCTaGCCCAGTCTCCTGCACTTG +
Preference number: 2 (lower is better)
Translates to: LSFGKWITSFLESTQQREIFSFF*PSLLHL
Trigger: CAAGTGCAGGAGACTGGGGCAGAAGAAGGAGAAAAT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACCAACATACCCAGGCTaGTTTTCAGGAGTGAATCAC +
Preference number: 2 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKPTYPG*FSGVNH
Trigger: GTGATTCACTCCTGAAAAGCAGCCTGGGTATGTTGG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTAGAAGTTAAGTACTaGTCTCAGATCTCATGGCAG +
Preference number: 2 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLEVKY*SQISWQ
Trigger: CTGCCATGAGATCTGAGACCAGTACTTAACTTCTAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAAGTATGGAAAGGAATaGTTCGGAAAAACCATTCAA +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTKYGKE*FGKTIQ
Trigger: TTGAATGGTTTTTCCGAACCATTCCTTTCCATACTT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTGTCCTTTGGAAAGTaGATAACCTCATTTTTAGAG +
Preference number: 2 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTLSFGK*ITSFLE
Trigger: CTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACACTGCAGTCCAGTCTaGGTGACAGATGACAGAAAA +
Preference number: 2 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKHCSPV*VTDDRK
Trigger: TTTTCTGTCATCTGTCACCCAGACTGGACTGCAGTG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATATGGATGTTTTGGCTaGGGGTGGTGGCACATGCCT +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAYGCFG*GWWHMP
Trigger: AGGCATGTGCCACCACCCCCAGCCAAAACATCCATA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CAA 90 bp ACACATTCCCTCCCAACAAAGCATAACCTATACCCCAAAACACTTTaGGCTATTGTTAGAATCATACTGAGCTCTCCTTTAGGGAATCAG +
Preference number: 2 (lower is better)
Translates to: THSLPTKHNLYPKTL*AIVRIILSSPLGNQ
Trigger: CTGATTCCCTAAAGGAGAGCTCAGTATGATTCTAACAATAGCCAAAAGTGTTTTGGGGTATAGGTTATGCTTTGTTGGGAGGGAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CAA 90 bp CACTTTGTTTCCAACAACAATGGAGCAAAAGGTGACAGTCCCATTTaGTGCCAGTTGAAAGCTGAGTTTGGCTTTAGTACCTATCATACT +
Preference number: 2 (lower is better)
Translates to: HFVSNNNGAKGDSPI*CQLKAEFGFSTYHT
Trigger: AGTATGATAGGTACTAAAGCCAAACTCAGCTTTCAACTGGCACAAAATGGGACTGTCACCTTTTGCTCCATTGTTGTTGGAAACAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTCAGGATCCCACACTaGAAATTCACGGCGCTCCAT +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFRIPH*KFTALH
Trigger: ATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTGAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATGCCATGCAGACATGTaGAATTGCCATTTCAGGATC +
Preference number: 2 (lower is better)
Translates to: LSFGKWITSFLESTQQRECHADM*NCHFRI
Trigger: GATCCTGAAATGGCAATTGCACATGTCTGCATGGCA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGTTTGCCAGTGTTGCTaGAATGCTGAACACACAGCA +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAVCQCC*NAEHTA
Trigger: TGCTGTGTGTTCAGCATTTCAGCAACACTGGCAAAC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGCAAGCAGAATGACTTaGTTGCCTTTTCCCTTAGTA +
Preference number: 2 (lower is better)
Translates to: LSFGKWITSFLESTQQREASRMT*LPFPLV
Trigger: TACTAAGGGAAAAGGCAAGCAAGTCATTCTGCTTGC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGCAAGCAGAATGACTTaGTTGCCTTTTCCCTTAGTA +
Preference number: 2 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKASRMT*LPFPLV
Trigger: TACTAAGGGAAAAGGCAAGCAAGTCATTCTGCTTGC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGTGGAAGATACGAGATaGTGGGAACAGAGCAGAGAT +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAVEDTR*WEQSRD
Trigger: ATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCAC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAATACAGCTCATACAATaGTTTCTGTCTGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKIQLIQ*FLSAAW
Trigger: CCAAGCTGCAGACAGAAAGCATTGTATGAGCTGTAT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACTAACTGAGCCCACCTaGGAAATCTTGAGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: LSFGKWITSFLESTQQRELTEPT*EILSRK
Trigger: TTTTCTACTCAAGATTTCCCAGGTGGGCTCAGTTAG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGAAGATACGAGATGCTaGGAACAGAGCAGAGATTCC +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAEDTRC*EQSRDS
Trigger: GGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTTAATGGGAAACCCTaGCCCAGATACAGCTCATAC +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFNGKP*PRYSSY
Trigger: GTATGAGCTGTATCTGGGTCAGGGTTTCCCATTAAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACACTGGATCTCCTCTTaGAGTTTAGTCTGCATAACC +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAHWISS*SLVCIT
Trigger: GGTTATGCAGACTAAACTTCAAGAGGAGATCCAGTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCAGGAGTGAATCACTaGAGCGCATTTGGATTTCCT +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASGVNH*SAFGFP
Trigger: AGGAAATCCAAATGCGCTTCAGTGATTCACTCCTGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACATCTTACTCACTGTTaGATCCCTAGCAGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAHLTHC*IPSSFG
Trigger: CCCAAAACTGCTAGGGATTCAACAGTGAGTAAGATG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATGTCGGCTTTCTCTTTaGCCCTCCAACTTCTTAGTT +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVACRLSL*PSNFLV
Trigger: AACTAAGAAGTTGGAGGGGCAAAGAGAAAGCCGACA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAACACTACTTTCTTTTaGGAATGTACAGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVANTTFF*ECTALP
Trigger: GGGGAGGGCTGTACATTCCCAAAAGAAAGTAGTGTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAAGACATTGGAGCCTTaGTTAGGTATCATGCACTAC +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAKTLEP*LGIMHY
Trigger: GTAGTGCATGATACCTAATCAAGGCTCCAATGTCTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATACACTCAAAAGCCTTaGCGAGGCTCTAAATATGGA +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAYTQKP*RGSKYG
Trigger: TCCATATTTAGAGCCTCGGCAAGGCTTTTGAGTGTA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGACAGTCCCATTTTGTaGCAGTTGAAAGCTGAGTTT +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVADSPIL*QLKAEF
Trigger: AAACTCAGCTTTCAACTGGCACAAAATGGGACTGTC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACTAGAAGTTAAGTACTaGTCTCAGATCTCATGGCAG +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALEVKY*SQISWQ
Trigger: CTGCCATGAGATCTGAGACCAGTACTTAACTTCTAG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACTCCAACTTCTTAGTTaGGCCTATTCTATGCTGCTA +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALQLLS*AYSMLL
Trigger: TAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCTCACTGTCCAGACTaGGAATTAAGAGCAAATCTT +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASHCPD*ELRANL
Trigger: AAGATTTGCTCTTAATTCTCAGTCTGGACAGTGAGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACCTAACTTAACATTCTaGAGAAAATTCCTGATTCAG +
Preference number: 2 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKPNLTF*RKFLIQ
Trigger: CTGAATCAGGAATTTTCTGCAGAATGTTAAGTTAGG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAACCATTTTTGTAGCTTaGGACTGGGATATTTTAAGA +
Preference number: 2 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKTIFVA*DWDILR
Trigger: TCTTAAAATATCCCAGTCCCAAGCTACAAAAATGGT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCAGTTTACATCTTATaGTTTGTGGGGCAATCAAAC +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASVYIL*FVGQSN
Trigger: GTTTGATTGCCCCACAAAGCATAAGATGTAAACTGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCACTGAAGCGCATTTaGATTTCCTATAACACTACT +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASLKRI*ISYNTT
Trigger: AGTAGTGTTATAGGAAATCCAAATGCGCTTCAGTGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAAGTATGGAAAGGAATaGTTCGGAAAAACCATTCAA +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAKYGKE*FGKTIQ
Trigger: TTGAATGGTTTTTCCGAACCATTCCTTTCCATACTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTGTCCTTTGGAAAGTaGATAACCTCATTTTTAGAG +
Preference number: 2 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALSFGK*ITSFLE
Trigger: CTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 72 bp CCTGACCCAGATACAGCTCATACAATGCTTTCTGTCTaGAGCTTGGCCTCCTCACCACACATTCCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: PDPDTAHTMLSV*SLASSPHIPSQ
Trigger: TTGGGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGCTGTATCTGGGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGGAAGAGGAACTGTGTaGTGTTTGCCAGTGTTGCTG +
Preference number: 3 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSGRGTV*CLPVLL
Trigger: CAGCAACACTGGCAAACACAACACAGTTCCTCTTCC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGGTGTGTCATGCTCTaGGGTGGGGTCACACTAGTT +
Preference number: 3 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGCVML*GGVTLV
Trigger: AACTAGTGTGACCCCACCCAAGAGCATGACACACCC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCTTTCTGTCTGCAGCTaGGCCTCCTCACCACACATT +
Preference number: 3 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTLSVCS*ASSPHI
Trigger: AATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCAAGACATTGGAGCCTaGATTAGGTATCATGCACTA +
Preference number: 3 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSQDIGA*IRYHAL
Trigger: TAGTGCATGATACCTAATCAAGGCTCCAATGTCTTG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp CATGTTTCCACAGCGGGGTGGTCTCACTGTCCAGACTaGGAATTAAGAGCAAATCTTTCCCACACATTGGAG +
Preference number: 3 (lower is better)
Translates to: HVSTAGWSHCPD*ELRANLSHTLE
Trigger: CTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGAGACCACCCCGCTGTGGAAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 72 bp TCCACTCTTGAGGATCTGGAATCAGGTCACAGACTGTaGTGGGTCCACACGCTTACATATGTGAACCTTCAA +
Preference number: 3 (lower is better)
Translates to: STLEDLESGHRL*WVHTLTYVNLQ
Trigger: TTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTGACCTGATTCCAGATCCTCAAGAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 72 bp TCCATTAACAACACCAGGGTGTGTCATGCTCTTGGGTaGGGTCACACTAGTTCTCCAAGTGACAAAACACAC +
Preference number: 3 (lower is better)
Translates to: SINNTRVCHALG*GHTSSPSDKTH
Trigger: GTGTGTTTTGTCACTTGGAGAACTAGTGTGACCCCACCCAAGAGCATGACACACCCTGGTGTTGTTAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 72 bp TCATCATATTTCTTTCCTTCTCCACTCTTGAGGATCTaGAATCAGGTCACAGACTGTGCTGGGTCCACACGC +
Preference number: 3 (lower is better)
Translates to: SSYFFPSPLLRI*NQVTDCAGSTR
Trigger: GCGTGTGGACCCAGCACAGTCTGTGACCTGATTCCAGATCCTCAAGAGTGGAGAAGGAAAGAAATATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTGCAGACATGTGCAATaGCCATTTCAGGATCCCACA +
Preference number: 3 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTCRHVQ*PFQDPT
Trigger: TGTGGGATCCTGAAATGGCAATTGCACATGTCTGCA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGAAGAGGAACTGTGTaGTGTTTGCCAGTGTTGCTG +
Preference number: 3 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGRGTV*CLPVLL
Trigger: CAGCAACACTGGCAAACACAACACAGTTCCTCTTCC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAGCAGAATGACTTGCTaGCCTTTTCCCTTAGTAGGT +
Preference number: 3 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSRMTC*PFPLVG
Trigger: ACCTACTAAGGGAAAAGGCAAGCAAGTCATTCTGCT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCCCATTTTGTGCCAGTaGAAAGCTGAGTTTGGCTTT +
Preference number: 3 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTPILCQ*KAEFGF
Trigger: AAAGCCAAACTCAGCTTTCAACTGGCACAAAATGGG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp AATGTATACACAACGCAAGAAGTGGCAATAAGGCTATaGTTACAGCTCCAGGTCCTGACTGACCTCGCCAAG +
Preference number: 3 (lower is better)
Translates to: NVYTTQEVAIRL*LQLQVLTDLAK
Trigger: CTTGGCGAGGTCAGTCAGGACCTGGAGCTGTAATCATAGCCTTATTGCCACTTCTTGCGTTGTGTATACATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 72 bp ACTCTTGAGGATCTGGAATCAGGTCACAGACTGTGCTaGGTCCACACGCTTACATATGTGAACCTTCAAGTA +
Preference number: 3 (lower is better)
Translates to: TLEDLESGHRLC*VHTLTYVNLQV
Trigger: TACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTGACCTGATTCCAGATCCTCAAGAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAGCAGAATGACTTGCTaGCCTTTTCCCTTAGTAGGT +
Preference number: 3 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSRMTC*PFPLVG
Trigger: ACCTACTAAGGGAAAAGGCAAGCAAGTCATTCTGCT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 72 bp CTGTCGGCTTTCTCTTTGCCCCTCCAACTTCTTAGTTaGGCCTATTCTATGCTGCTACTTCAAGTTACTCAA +
Preference number: 3 (lower is better)
Translates to: LSAFSLPLQLLS*AYSMLLLQVTQ
Trigger: TTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAGGGGCAAAGAGAAAGCCGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGGGTGTGTCATGCTCTaGGGTGGGGTCACACTAGTT +
Preference number: 3 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAGCVML*GGVTLV
Trigger: AACTAGTGTGACCCCACCCAAGAGCATGACACACCC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGGAAGAGGAACTGTGTaGTGTTTGCCAGTGTTGCTG +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKGRGTV*CLPVLL
Trigger: CAGCAACACTGGCAAACACAACACAGTTCCTCTTCC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTTACATCTTATGCTTaGTGGGGCAATCAAACCAAA +
Preference number: 3 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFTSYA*WGNQTK
Trigger: TTTGGTTTGATTGCCCCACAAAGCATAAGATGTAAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGGTGACAGTCCCATTTaGTGCCAGTTGAAAGCTGAG +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKGDSPI*CQLKAE
Trigger: CTCAGCTTTCAACTGGCACAAAATGGGACTGTCACC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 72 bp TGCCCCTCCAACTTCTTAGTTGGGCCTATTCTATGCTaGTACTTCAAGTTACTCAAATGTGTTTTGTCTGGT +
Preference number: 3 (lower is better)
Translates to: CPSNFLVGPILC*YFKLLKCVLSG
Trigger: ACCAGACAAAACACATTTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGCAGACATGTGCAATaGCCATTTCAGGATCCCACA +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKCRHVQ*PFQDPT
Trigger: TGTGGGATCCTGAAATGGCAATTGCACATGTCTGCA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp CTTCTGCCCCAGTCTCCTGCACTTGACTTAGTTTGGTaGAACATGGAAATCCTTAATGCTGGCTTAAAATTA +
Preference number: 3 (lower is better)
Translates to: LLPQSPALDLVW*NMEILNAGLKL
Trigger: TAATTTTAAGCCAGCATTAAGGATTTCCATGTTTCACCAAACTAAGTCAAGTGCAGGAGACTGGGGCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 72 bp AAGGGAGTTCCCTTAATCTGTTACACTCAAAAGCCTTaGCGAGGCTCTAAATATGGAATACTTCTAGTGGAA +
Preference number: 3 (lower is better)
Translates to: KGVPLICYTQKP*RGSKYGILLVE
Trigger: TTCCACTAGAAGTATTCCATATTTAGAGCCTCGGCAAGGCTTTTGAGTGTAACAGATTAAGGGAACTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 72 bp CTTTGCCCCTCCAACTTCTTAGTTGGGCCTATTCTATaGTGCTACTTCAAGTTACTCAAATGTGTTTTGTCT +
Preference number: 3 (lower is better)
Translates to: LCPSNFLVGPIL*CYFKLLKCVLS
Trigger: AGACAAAACACATTTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAGGGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACCCATTTTGTGCCAGTaGAAAGCTGAGTTTGGCTTT +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKPILCQ*KAEFGF
Trigger: AAAGCCAAACTCAGCTTTCAACTGGCACAAAATGGG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTCCCTCTTGCCACTTaGTTTCCAACAACAATGGAG +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKFPLAT*FPTTME
Trigger: CTCCATTGTTGTTGGAAACAAAGTGGCAAGAGGGAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATGCAGACATGTGCAATaGCCATTTCAGGATCCCACA +
Preference number: 3 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVACRHVQ*PFQDPT
Trigger: TGTGGGATCCTGAAATGGCAATTGCACATGTCTGCA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACCCACCTGGGAAATCTaGAGTAGAAAATATGTGATG +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKPTWEI*SRKYVM
Trigger: CATCACATATTTTCTACTCAAGATTTCCCAGGTGGG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACCCACCTGGGAAATCTaGAGTAGAAAATATGTGATG +
Preference number: 3 (lower is better)
Translates to: LSFGKWITSFLESTQQREPTWEI*SRKYVM
Trigger: CATCACATATTTTCTACTCAAGATTTCCCAGGTGGG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCCTCATTTTCCCTCTaGCCACTTTGTTTCCAACAA +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSSFSL*PLCFQQ
Trigger: TTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAACACTGGATCTCCTCTaGAAGTTTAGTCTGCATAAC +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKTLDLL*KFSLHN
Trigger: GTTATGCAGACTAAACTTCAAGAGGAGATCCAGTGT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTCCCTCTTGCCACTTaGTTTCCAACAACAATGGAG +
Preference number: 3 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFPLAT*FPTTME
Trigger: CTCCATTGTTGTTGGAAACAAAGTGGCAAGAGGGAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGACCATTTTTGTAGCTaGGGACTGGGATATTTTAAG +
Preference number: 3 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKDHFCS*GLGYFK
Trigger: CTTAAAATATCCCAGTCCCAAGCTACAAAAATGGTC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp ACTGTCCAAGAATTCATGTGGCCTCAAGTCTTATTCTaGAACTTGTCCTTTGGAAAGTGGATAACCTCATTT +
Preference number: 3 (lower is better)
Translates to: TVQEFMWPQVLF*NLSFGKWITSF
Trigger: AAATGAGGTTATCCACTTTCCAAAGGACAAGTTTCAGAATAAGACTTGAGGCCACATGAATTCTTGGACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp AACACAATGTTACTTCATGTCAACGTTTCTGAGGATTaGATGAAGGGTCTGTACCTAATGACAAAAGAGCTG +
Preference number: 3 (lower is better)
Translates to: NTMLLHVNVSED*MKGLYLMTKEL
Trigger: CAGCTCTTTTGTCATTAGGTACAGACCCTTCATTCAATCCTCAGAAACGTTGACATGAAGTAACATTGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp TCTGTTATAAAACTAACATCCTTTAATGGGAAACCCTaGCCCAGATACAGCTCATACAATGCTTTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: SVIKLTSFNGKP*PRYSSYNAFCL
Trigger: CAGACAGAAAGCATTGTATGAGCTGTATCTGGGTCAGGGTTTCCCATTAAAGGATGTTAGTTTTATAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp ACACACAGTGCAATTTTTAGCTGCATACATTTCTTCTaGGCTCCAACTCAGCAATATGCAATCTTGACATCA +
Preference number: 3 (lower is better)
Translates to: THSAIFSCIHFF*APTQQYAILTS
Trigger: TGATGTCAAGATTGCATATTGCTGAGTTGGAGCTCAGAAGAAATGTATGCAGCTAAAAATTGCACTGTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAACGGCATGCACATTGTaGAGAAGTTATCTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVATACTL*RSYLFS
Trigger: AGAGAACAGATAACTTCTCAACAATGTGCATGCCGT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR GCA 72 bp CTGCATACATTTCTTCTGAGCTCCAACTCAGCAATATaGAATCTTGACATCAAAGCATTAGCCAAATATTTG +
Preference number: 3 (lower is better)
Translates to: LHTFLLSSNSAI*NLDIKALAKYL
Trigger: CAAATATTTGGCTAATGCTTTGATGTCAAGATTGCATATTGCTGAGTTGGAGCTCAGAAGAAATGTATGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CCA 72 bp AAATATGGAATACTTCTAGTGGAAGATACGAGATGCTaGGAACAGAGCAGAGATTCCCATAAAGTAAAAGAA +
Preference number: 3 (lower is better)
Translates to: KYGILLVEDTRC*EQSRDSHKVKE
Trigger: TTCTTTTACTTTATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCCATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTTACATCTTATGCTTaGTGGGGCAATCAAACCAAA +
Preference number: 3 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFTSYA*WGNQTK
Trigger: TTTGGTTTGATTGCCCCACAAAGCATAAGATGTAAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp ACTGTAAAACACAATGTTACTTCATGTCAACGTTTCTaGGGATTGAATGAAGGGTCTGTACCTAATGACAAA +
Preference number: 3 (lower is better)
Translates to: TVKHNVTSCQRF*GLNEGSVPNDK
Trigger: TTTGTCATTAGGTACAGACCCTTCATTCAATCCTCAGAAACGTTGACATGAAGTAACATTGTGTTTTACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR TCA 72 bp AGTTCTGAACATCTACACAAACGGCATGCACATTGTTaGGAAGTTATCTGTTCTCTTATTGCATACATCTTA +
Preference number: 3 (lower is better)
Translates to: SSEHLHKRHAHC*EVICSLIAYIL
Trigger: TAAGATGTATGCAATAAGAGAACAGATAACTTCTCAACAATGTGCATGCCGTTTGTGTAGATGTTCAGAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCAGCTCCCGGCGGCTaGCAGGCGGATCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRAAPGG*QADPTV
Trigger: CACAGTGGGATCCGCCTGGCAGCCGCCGGGAGCTGC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGCAATCCCTCGGCCCTaGGGCAGGACCGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVAIPRP*GRTGRA
Trigger: TGCTCTCCCGGTCCTGCCCCAGGGCCGAGGGATTGC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCGCTGAGGTCTGCTaGACTGGTACTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRAAEVC*TGTAGT
Trigger: AGTCCCAGCAGTACCAGTTCAGCAGACCTCAGCGGC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGCTCCAGGTCCTGACTaGCCTCGCCAAGTTCCATAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGAPGPD*PRQVPY
Trigger: GTATGGAACTTGGCGAGGTCAGTCAGGACCTGGAGC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTACAGCTCCAGGTCCTaGCTGACCTCGCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGYSSRS*LTSPSS
Trigger: GGAACTTGGCGAGGTCAGTCAGGACCTGGAGCTGTA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCATATTTCCTCCCCCTaGTCTGCTGGGAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGHISSP*SAGSPH
Trigger: GTGAGGGCTCCCAGCAGAGCAGGGGGAGGAAATATG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGAGAGAGGGAGCCTCTaGCGGCCAAGGAAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVERGSL*RPRKGE
Trigger: TTCGCCCTTCCTTGGCCGCCAGAGGCTCCCTCTCTC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGCTATCCACCGGGGTaGGGGGTGGAACACCAGAAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCYPPG*GVEHQN
Trigger: ATTCTGGTGTTCCACCCCTCACCCCGGTGGATAGCA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGCGCAGGCAGGTTCCTaGAGGAATAGGATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGAQAGS*RNRILS
Trigger: GGAAAGGATCCTATTCCTTCAGGAACCTGCCTGCGC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTCTCAGGAGAAGGCTaGAGGGAACTTGTAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGVSGEG*RELVGA
Trigger: TGCGCCTACAAGTTCCCTTCAGCCTTCTCCTGAGAC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTGCTCCTAAGCCGCTaGGGTCTGCTGAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLLLSR*GLLNWY
Trigger: GTACCAGTTCAGCAGACCTCAGCGGCTTAGGAGCAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTACAGCTCCAGGTCCTaGCTGACCTCGCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRYSSRS*LTSPSS
Trigger: GGAACTTGGCGAGGTCAGTCAGGACCTGGAGCTGTA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTACAGCTCCAGGTCCTaGCTGACCTCGCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSYSSRS*LTSPSS
Trigger: GGAACTTGGCGAGGTCAGTCAGGACCTGGAGCTGTA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTTCCTCCTCATCCTaGTCAGTGCCTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSSSSS*SVPVSP
Trigger: GGGAGAGACAGGCACTGAGCAGGATGAGGAGGAAGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGCTCGGTCCTGGGATaGTGTCATTCCAAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCSVLG*CHSKSL
Trigger: GAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTCCCCCTGCTCTGCTaGGAGCCCTCACCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLPLLC*EPSPSF
Trigger: AAAAGAAGGTGAGGGCTCCCAGCAGAGCAGGGGGAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTCCCCCTGCTCTGCTaGGAGCCCTCACCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLPLLC*EPSPSF
Trigger: AAAAGAAGGTGAGGGCTCCCAGCAGAGCAGGGGGAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGGAGAGGCACTTCTaGGAGTGGTTCGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKREERHF*EWFVHL
Trigger: CAGGTGAACGAACCACTCTCAGAAGTGCCTCTCCTC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGAGGAGAGGCACTTCTaGGAGTGGTTCGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSEERHF*EWFVHL
Trigger: CAGGTGAACGAACCACTCTCAGAAGTGCCTCTCCTC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTGTCGGGAGTCTGTTaGTTAGATGTGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLSGVC*LDVESS
Trigger: CGAGGACTCCACATCTAATCAACAGACTCCCGACAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGAGGTCTGAGCTGTTaGACATGGCTTGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGGLSC*TWLGCP
Trigger: TGGACACCCAAGCCATGTTCAACAGCTCAGACCTCC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGAACGAGTGGAGGTCTaGGCTGTTGAACATGGCTTG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGERVEV*AVEHGL
Trigger: CAAGCCATGTTCAACAGCTCAGACCTCCACTCGTTC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTCAGGAGAAGGCTaGAGGGAACTTGTAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVSGEG*RELVGA
Trigger: TGCGCCTACAAGTTCCCTTCAGCCTTCTCCTGAGAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCTGCTCCTAAGCCGCTaGGGTCTGCTGAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVLLLSR*GLLNWY
Trigger: GTACCAGTTCAGCAGACCTCAGCGGCTTAGGAGCAG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGCTCCAGGTCCTGACTaGCCTCGCCAAGTTCCATAC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVAPGPD*PRQVPY
Trigger: GTATGGAACTTGGCGAGGTCAGTCAGGACCTGGAGC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCGGGTTCCTTGCTCTaGTGGATCTCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSGSLL*WISSPG
Trigger: ACCTGGTGAAGAGATCCAGCAGAGCAAGGAACCCGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCTTCCTCCTCATCCTaGTCAGTGCCTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSSSSS*SVPVSP
Trigger: GGGAGAGACAGGCACTGAGCAGGATGAGGAGGAAGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCTTCCTCCTCATCCTaGTCAGTGCCTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSSSSS*SVPVSP
Trigger: GGGAGAGACAGGCACTGAGCAGGATGAGGAGGAAGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCAATGGCCATGTCGCTaGCAGGAAGGACAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRQWPCR*QEGQVL
Trigger: TAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCAATGGCCATGTCGCTaGCAGGAAGGACAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSQWPCR*QEGQVL
Trigger: TAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGCTCGGTCCTGGGATaGTGTCATTCCAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCSVLG*CHSKSL
Trigger: AAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGGGTATGTGTTACTaGTCACCAGCACCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKREGMCY*SPAPSA
Trigger: AGCCGAGGGTGCTGGTGAGCAGTAACACATACCCTC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCACCAGGGTGTGTCATaGTCTTGGGTGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVHQGVS*SWVGSH
Trigger: GTGTGACCCCACCCAAGAGCATGACACACCCTGGTG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGATCTCATGGCAGGGTaGTCTCTGCCATGCAGACAT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGDLMAG*SLPCRH
Trigger: ATGTCTGCATGGCAGAGAGCACCCTGCCATGAGATC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAACCCTAGTGACCACTaGCCACCAAAATGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGNPSDH*PPKCPS
Trigger: TGAGGGGCATTTTGGTGGGCAGTGGTCACTAGGGTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCAGTTGACTCACAGTTaGGGAGACAGCCTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGQLTHS*GDSLSS
Trigger: CGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCAGGCGCTCTGTCTCTaGGACTGCTTCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGQALCL*DCFIQV
Trigger: GACTTGAATGAAGCAGTCCCAGAGACAGAGCGCCTG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTCCTAGAGGGTCTCTaGCGTCTGTTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGVLEGL*RLFFTE
Trigger: CTCTGTGAAGAACAGACGCCAGAGACCCTCTAGGAC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGAAGTCCTAACACATTaGCTGCAGCTCCCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVEVLTH*LQLPAA
Trigger: AGCCGCCGGGAGCTGCAGCCAATGTGTTAGGACTTC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCCTTGTTTTGGCAATaGCTGCAGCATTCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPLFWQ*LQHSRW
Trigger: CCAACGAGAATGCTGCAGTCATTGCCAAAACAAGGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTTCTCTGAGGAGATaGATGTCCACCTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSSLRR*MSTFPP
Trigger: AGGGGGAAAGGTGGACATTCATCTCCTCAGAGAAGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGCGGTTGTTCTGTCCTaGTTCATGCACACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGAVVLS*FMHTSL
Trigger: GAGAGAAGTGTGCATGAATCAGGACAGAACAACCGC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCAGCCTTCTCAGAAATaGTGGCACTGGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGQPSQK*WHWENQ
Trigger: CTGATTCTCCCAGTGCCATCATTTCTGAGAAGGCTG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTGTCGGGAGTCTGTTaGTTAGATGTGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLSGVC*LDVESS
Trigger: CGAGGACTCCACATCTAATCAACAGACTCCCGACAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCAGTTGGCTTTGTGGTaGAGGGATTTCGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGQLALW*RDFGLW
Trigger: CCAAAGTCCGAAATCCCTTCACCACAAAGCCAACTG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAAGTTCATACTCAGCTaGAGCAGCCACAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGKFILS*SSHRVN
Trigger: GTTGACCCTGTGGCTGCTTCAGCTGAGTATGAACTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTCCAGTCTGCCTCTaGAGATCCTGCTACCTGCAG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFPVCL*RSCYLQ
Trigger: CTGCAGGTAGCAGGATCTTCAGAGGCAGACTGGAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTTCCAGTCTGCCTCTaGAGATCCTGCTACCTGCAG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSFPVCL*RSCYLQ
Trigger: CTGCAGGTAGCAGGATCTTCAGAGGCAGACTGGAAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAACGAGTGGAGGTCTaGGCTGTTGAACATGGCTTG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRERVEV*AVEHGL
Trigger: CAAGCCATGTTCAACAGCTCAGACCTCCACTCGTTC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCGGGTTCCTTGCTCTaGTGGATCTCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSGSLL*WISSPG
Trigger: ACCTGGTGAAGAGATCCAGCAGAGCAAGGAACCCGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCTTCCTCCTCATCCTaGTCAGTGCCTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSSSSS*SVPVSP
Trigger: GGGAGAGACAGGCACTGAGCAGGATGAGGAGGAAGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGCAAGATGTCTGCTTaGCATCCAAGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGKMSA*HPSSPW
Trigger: CCATGGAGAACTTGGATGGCAAGCAGACATCTTGCC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGACCATGAGAAAGGCATaGAAGGGGAACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRTMRKA*KGNEWR
Trigger: CCTCCACTCGTTCCCCTTGCATGCCTTTCTCATGGT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTGCTCGGTCCTGGGATaGTGTCATTCCAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSCSVLG*CHSKSL
Trigger: AAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCGCAGTCTAGCTTTGTaGCAAGAAGCACCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGRSLAL*QEAPEV
Trigger: GACTTCAGGTGCTTCTTGGCACAAAGCTAGACTGCG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCAGTTGACTCACAGTTaGGGAGACAGCCTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRQLTHS*GDSLSS
Trigger: CGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGTTCCTTGCTCTGCTaGATCTCTTCACCAGGTATC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGSLLC*ISSPGI
Trigger: GATACCTGGTGAAGAGATCCAGCAGAGCAAGGAACC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTCGCTCACTTGTCCTaGTTTTTCCCGCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLAHLS*FFPPNN
Trigger: GTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTCTGGCTTATCAACTaGGCAACCTCGCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGVWLIN*ATSLTC
Trigger: ACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGAC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGCTCAAAGACTTCAATaGCCATGTCGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGAQRLQ*PCRCQE
Trigger: TTCCTGGCAGCGACATGGCCATTGAAGTCTTTGAGC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTCTAATCCGCACTTaGAGGCCTTGCACTTCCACA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSLIRT*RPCTST
Trigger: TGTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCAGGCGCTCTGTCTCTaGGACTGCTTCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRQALCL*DCFIQV
Trigger: GACTTGAATGAAGCAGTCCCAGAGACAGAGCGCCTG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGCAAGGGGAACGAGTaGAGGTCTGAGCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCKGNE*RSELLN
Trigger: GTTCAACAGCTCAGACCTCCACTCGTTCCCCTTGCA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTGCAAGGGGAACGAGTaGAGGTCTGAGCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSCKGNE*RSELLN
Trigger: GTTCAACAGCTCAGACCTCCACTCGTTCCCCTTGCA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGACTGAGAGAGCCCTaGTGTTTTAGGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGLREP*CFRFCS
Trigger: GGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGGACTGAGAGAGCCCTaGTGTTTTAGGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSGLREP*CFRFCS
Trigger: GGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGACCACTGCTCGGTCCTaGGATGCTGTCATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRTTARS*DAVIPR
Trigger: TCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTAGTCCCAGCTACTTaGGAAGCTGAAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVVPAT*EAEAGG
Trigger: TCCTCCTGCTTCAGCTTCCCAAGTAGCTGGGACTAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGTAGTCCCAGCTACTTaGGAAGCTGAAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSVVPAT*EAEAGG
Trigger: TCCTCCTGCTTCAGCTTCCCAAGTAGCTGGGACTAC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTATGGATGTTTTGGCTaGGGGTGGTGGCACATGCCT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSYGCFG*GWWHMP
Trigger: AGGCATGTGCCACCACCCCCAGCCAAAACATCCATA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGTCACAGACTGTGCTaGGTCCACACGCTTACATAT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGHRLC*VHTLTY
Trigger: ATATGTAAGCGTGTGGACCCAGCACAGTCTGTGACC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCGATATGCATTCCTGTaGGGAGAGGCACTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRRYAFL*GEALLR
Trigger: TCTCAGAAGTGCCTCTCCTCACAGGAATGCATATCG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCGATATGCATTCCTGTaGGGAGAGGCACTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSRYAFL*GEALLR
Trigger: TCTCAGAAGTGCCTCTCCTCACAGGAATGCATATCG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGCTTCATTCTTCTCTaGGGAGATGAATGTCCACCT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGFILL*GDECPP
Trigger: AGGTGGACATTCATCTCCTCAGAGAAGAATGAAGCC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAATACTGCACTCAGTTaGCTCACAGTTGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGNTALS*LTVGET
Trigger: TGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCAGCCTTCTCAGAAATaGTGGCACTGGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRQPSQK*WHWENQ
Trigger: CTGATTCTCCCAGTGCCATCATTTCTGAGAAGGCTG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAACACCTCGCTTGTTTaGAGGAGGCCAGGAATTAGA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGNTSLV*RRPGIR
Trigger: TCTAATTCCTGGCCTCCTTCAAACAAGCGAGGTGTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAAGCATCAGGAGAGGTaGAATCACCACCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGKHQER*NHHLQV
Trigger: AACTTGCAGGTGGTGATTTCACCTCTCCTGATGCTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGTCTCTCCCCAGTCTaGATTATACCTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCLSPV*IIPGSH
Trigger: GTGAGATCCAGGTATAATTCAGACTGGGGAGAGACA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAAGTTCATACTCAGCTaGAGCAGCCACAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSKFILS*SSHRVN
Trigger: GTTGACCCTGTGGCTGCTTCAGCTGAGTATGAACTT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAAGTTCATACTCAGCTaGAGCAGCCACAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRKFILS*SSHRVN
Trigger: GTTGACCCTGTGGCTGCTTCAGCTGAGTATGAACTT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCACAATCTGGTCATTaGCTTGTATTCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPQSGH*LVFCHP
Trigger: GGGATGGCAGAATACAAGTCAATGACCAGATTGTGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTTGTGTCCAGTTCTaGTGGGGAAAACATGTCCTC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRACVQF*WGKHVL
Trigger: GAGGACATGTTTTCCCCATCAGAACTGGACACAAGC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGTTTTCAGTGCTTTTaGATCCAGGCGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSFQCF*IQALCL
Trigger: GAGACAGAGCGCCTGGATTCAAAAGCACTGAAAACT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTTTCCAGTCTGCCTCTaGAGATCCTGCTACCTGCAG +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVFPVCL*RSCYLQ
Trigger: CTGCAGGTAGCAGGATCTTCAGAGGCAGACTGGAAA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGACCCTCGGCTGTAGTTaGCGTCATCTTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGTLGCS*RHLFCL
Trigger: AAGACAGAAAAGATGACGTCAACTACAGCCGAGGGT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGGTATACGGTGTCAGTaGTCGTCCCAACAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSGIRCQ*SSQQVY
Trigger: ATACACCTGTTGGGACGATCACTGACACCGTATACC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTATACGGTGTCAGTaGTCGTCCCAACAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGIRCQ*SSQQVY
Trigger: ATACACCTGTTGGGACGATCACTGACACCGTATACC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCAATGGAGCAAAAGGTaGCAGTCCCATTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGQWSKR*QSHFVP
Trigger: TGGCACAAAATGGGACTGTCACCTTTTGCTCCATTG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTTTCCAGGAGAAGCTaGTTCTGTCGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLSRRS*FCRLSL
Trigger: AAGAGAAAGCCGACAGAATCAGCTTCTCCTGGAAAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGCTCCAGGTCCTGACTaGCCTCGCCAAGTTCCATAC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTAPGPD*PRQVPY
Trigger: GTATGGAACTTGGCGAGGTCAGTCAGGACCTGGAGC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAGGCGGATCCCACTGTaGCACGGAGAGAGACGAGCT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHRRIPL*HGERRA
Trigger: AGCTCGTCTCTCTCCGTGTCACAGTGGGATCCGCCT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGTGCCAAGAAGCACCTaGAGTCCTAACACATTGGCT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSVPRST*SPNTLA
Trigger: AGCCAATGTGTTAGGACTTCAGGTGCTTCTTGGCAC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCGGGTTCCTTGCTCTaGTGGATCTCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSGSLL*WISSPG
Trigger: ACCTGGTGAAGAGATCCAGCAGAGCAAGGAACCCGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCTCTGTTGCTTTGCTaGCTCCCTTCCAACCAAATT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPLLLC*LPSNQI
Trigger: AATTTGGTTGGAAGGGAGGCAGCAAAGCAACAGAGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGCAAGATGTCTGCTTaGCATCCAAGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGKMSA*HPSSPW
Trigger: CCATGGAGAACTTGGATGGCAAGCAGACATCTTGCC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTGGCAGGGTGCTCTCTaGCATGCAGACATGTGCAAT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVWQGAL*HADMCN
Trigger: ATTGCACATGTCTGCATGGCAGAGAGCACCCTGCCA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGATTTTCTCCTTCTTCTaGCCCAGTCTCCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGIFSFF*PSLLHL
Trigger: CAAGTGCAGGAGACTGGGGCAGAAGAAGGAGAAAAT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTGGAAGATACGAGATaGTGGGAACAGAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGVEDTR*WEQSRD
Trigger: ATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCAC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGACAATGCTTTCTGTCTaGAGCTTGGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRTMLSV*SLASSP
Trigger: TGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCAACCCTAGTGACCACTaGCCACCAAAATGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVNPSDH*PPKCPS
Trigger: TGAGGGGCATTTTGGTGGGCAGTGGTCACTAGGGTT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCAACATACCCAGGCTaGTTTTCAGGAGTGAATCAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPTYPG*FSGVNH
Trigger: GTGATTCACTCCTGAAAAGCAGCCTGGGTATGTTGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCAGTACTGCCTCTGTTaGACTTGGAACCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRQYCLC*TWNLPI
Trigger: AATGGGGAGGTTCCAAGTCCAACAGAGGCAGTACTG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCAGTACTGCCTCTGTTaGACTTGGAACCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSQYCLC*TWNLPI
Trigger: AATGGGGAGGTTCCAAGTCCAACAGAGGCAGTACTG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCCTGTTCCAGTGTCTaGCTTATCAACTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSCSSV*LINWAT
Trigger: GGTTGCCCAGTTGATAAGCCAGACACTGGAACAGGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTCAAAGACTTCAATaGCCATGTCGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRAQRLQ*PCRCQE
Trigger: TTCCTGGCAGCGACATGGCCATTGAAGTCTTTGAGC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGCTCAAAGACTTCAATaGCCATGTCGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSAQRLQ*PCRCQE
Trigger: TTCCTGGCAGCGACATGGCCATTGAAGTCTTTGAGC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTCTTCACAGAGAGCTaGGCTCGAGTTTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFFTES*ARVFSA
Trigger: AGCACTGAAAACTCGAGCCCAGCTCTCTGTGAAGAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCACCGCCAATGAACTaGATGCCCTTAGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRAPPMN*MPLVIW
Trigger: CCAAATCACTAAGGGCATCCAGTTCATTGGCGGTGC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGGACTGAGAGAGCCCTaGTGTTTTAGGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVGLREP*CFRFCS
Trigger: GGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGTCATGCTCTTGGGTaGGGTCACACTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCHALG*GHTSSP
Trigger: TGGAGAACTAGTGTGACCCCACCCAAGAGCATGACA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTCTGTCTGCAGCTTaGCCTCCTCACCACACATTC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFLSAA*PPHHTF
Trigger: GAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCACTGCAGTCCAGTCTaGGTGACAGATGACAGAAAA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGHCSPV*VTDDRK
Trigger: TTTTCTGTCATCTGTCACCCAGACTGGACTGCAGTG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGTAGTCCCAGCTACTTaGGAAGCTGAAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVVVPAT*EAEAGG
Trigger: TCCTCCTGCTTCAGCTTCCCAAGTAGCTGGGACTAC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGGTCACAGACTGTGCTaGGTCCACACGCTTACATAT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSGHRLC*VHTLTY
Trigger: ATATGTAAGCGTGTGGACCCAGCACAGTCTGTGACC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCCCTTGTTTTGGCAATaGCTGCAGCATTCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVPLFWQ*LQHSRW
Trigger: CCAACGAGAATGCTGCAGTCATTGCCAAAACAAGGG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGGCTTCATTCTTCTCTaGGGAGATGAATGTCCACCT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSGFILL*GDECPP
Trigger: AGGTGGACATTCATCTCCTCAGAGAAGAATGAAGCC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTTTCGAGTCTCAGTaGACTTGGAATATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSFESQ*TWNMKG
Trigger: GCCCTTCATATTCCAAGTTCACTGAGACTCGAAAGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCAGCCTTCTCAGAAATaGTGGCACTGGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVQPSQK*WHWENQ
Trigger: CTGATTCTCCCAGTGCCATCATTTCTGAGAAGGCTG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAACACCTCGCTTGTTTaGAGGAGGCCAGGAATTAGA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRNTSLV*RRPGIR
Trigger: TCTAATTCCTGGCCTCCTTCAAACAAGCGAGGTGTT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAACACCTCGCTTGTTTaGAGGAGGCCAGGAATTAGA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSNTSLV*RRPGIR
Trigger: TCTAATTCCTGGCCTCCTTCAAACAAGCGAGGTGTT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAAGCATCAGGAGAGGTaGAATCACCACCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRKHQER*NHHLQV
Trigger: AACTTGCAGGTGGTGATTTCACCTCTCCTGATGCTT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAAGCATCAGGAGAGGTaGAATCACCACCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSKHQER*NHHLQV
Trigger: AACTTGCAGGTGGTGATTTCACCTCTCCTGATGCTT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTGTCTCTCCCCAGTCTaGATTATACCTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSCLSPV*IIPGSH
Trigger: GTGAGATCCAGGTATAATTCAGACTGGGGAGAGACA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCCACAATCTGGTCATTaGCTTGTATTCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRPQSGH*LVFCHP
Trigger: GGGATGGCAGAATACAAGTCAATGACCAGATTGTGG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGCCCTTGGTGTTTCTaGGAACTGTTGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCPWCF*ELLLQN
Trigger: ATTTTGCAGCAACAGTTCTCAGAAACACCAAGGGCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAACTCTTTGAACTTGTaGCTGAGCTTGCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGNSLNL*LSLLVS
Trigger: GGACACAAGCAAGCTCAGTCACAAGTTCAAAGAGTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGCTTTGAGTCTCTTTaGGATGCTCATTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGFESL*DAHSLC
Trigger: ACACAGTGAATGAGCATCTCAAAGAGACTCAAAGCC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAGTTTTCAGTGCTTTTaGATCCAGGCGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSFQCF*IQALCL
Trigger: GAGACAGAGCGCCTGGATTCAAAAGCACTGAAAACT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGTTTTCAGTGCTTTTaGATCCAGGCGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSFQCF*IQALCL
Trigger: GAGACAGAGCGCCTGGATTCAAAAGCACTGAAAACT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGGAACACCAGAATCTaGTTCTGGAGAAGACGTTCT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGWNTRI*FWRRRS
Trigger: AGAACGTCTTCTCCAGAATCAGATTCTGGTGTTCCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGCGCAGGCAGGTTCCTaGAGGAATAGGATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTAQAGS*RNRILS
Trigger: GGAAAGGATCCTATTCCTTCAGGAACCTGCCTGCGC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCACCCTCGGCTGTAGTTaGCGTCATCTTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSTLGCS*RHLFCL
Trigger: AAGACAGAAAAGATGACGTCAACTACAGCCGAGGGT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGACCCTCGGCTGTAGTTaGCGTCATCTTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRTLGCS*RHLFCL
Trigger: AAGACAGAAAAGATGACGTCAACTACAGCCGAGGGT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGTTTGCCAGTGTTGCTaGAATGCTGAACACACAGCA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSVCQCC*NAEHTA
Trigger: TGCTGTGTGTTCAGCATTTCAGCAACACTGGCAAAC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTTGCCAGTGTTGCTaGAATGCTGAACACACAGCA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVCQCC*NAEHTA
Trigger: TGCTGTGTGTTCAGCATTTCAGCAACACTGGCAAAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTTAATGGGAAACCCTaGCCCAGATACAGCTCATAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFNGKP*PRYSSY
Trigger: GTATGAGCTGTATCTGGGTCAGGGTTTCCCATTAAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCAATGGAGCAAAAGGTaGCAGTCCCATTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSQWSKR*QSHFVP
Trigger: TGGCACAAAATGGGACTGTCACCTTTTGCTCCATTG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCACTGGATCTCCTCTTaGAGTTTAGTCTGCATAACC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGHWISS*SLVCIT
Trigger: GGTTATGCAGACTAAACTTCAAGAGGAGATCCAGTG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAAACTCAGTTCGATATaGATTCCTGTGAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGKLSSI*IPVRRG
Trigger: GCCTCTCCTCACAGGAATGCATATCGAACTGAGTTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCATATTTCCTCCCCCTaGTCTGCTGGGAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHHISSP*SAGSPH
Trigger: GTGAGGGCTCCCAGCAGAGCAGGGGGAGGAAATATG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGTTTTGGCAATGACTaGAGCATTCTCGTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCFGND*SILVGF
Trigger: GAACCCAACGAGAATGCTGCAGTCATTGCCAAAACA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCCAAGGAATCAGTACTaGCTCTGTTGGACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRPRNQY*LCWTWN
Trigger: GTTCCAAGTCCAACAGAGGCAGTACTGATTCCTTGG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTCGGACTTTGGCATTaGCTTACTTTCAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFGLWH*LTFSTR
Trigger: CCTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGTGAAATCACCACCTaGAAGTTCTTTCCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGEITT*KFFPLL
Trigger: CAACAGAGGAAAGAACTTGCAGGTGGTGATTTCACC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTCAAGTCCAGCATCTaGTCCAACACCCATTCCAAT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFKSSI*SNTHSN
Trigger: ATTGGAATGGGTGTTGGAGCAGATGCTGGACTTGAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCAATGGCCATGTCGCTaGCAGGAAGGACAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTQWPCR*QEGQVL
Trigger: TAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGGCAAGATGTCTGCTTaGCATCCAAGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVGKMSA*HPSSPW
Trigger: CCATGGAGAACTTGGATGGCAAGCAGACATCTTGCC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCTTGGCAAGATGTCTaGTTGCCATCCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSWQDV*LPSKFS
Trigger: GGAGAACTTGGATGGCAAGCAGACATCTTGCCAAGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTCTGTCTCTGGGACTaGTTCATTCAAGTCTTGACT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLCLWD*FIQVLT
Trigger: AGTCAAGACTTGAATGAAGCAGTCCCAGAGACAGAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCCACTTCTTTCCCTTaGTGGAATTCCTTCGCAAAG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSTSFP*WNSFAK
Trigger: CTTTGCGAAGGAATTCCAGCAAGGGAAAGAAGTGGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTATTTCCATCCAACTaGAGGAGCTGTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLFPSN*RSCSPV
Trigger: CACTGGAGAACAGCTCCTGCAGTTGGATGGAAATAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCACCAGGGTGTGTCATaGTCTTGGGTGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHHQGVS*SWVGSH
Trigger: GTGTGACCCCACCCAAGAGCATGACACACCCTGGTG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGATTTTCTCCTTCTTCTaGCCCAGTCTCCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRIFSFF*PSLLHL
Trigger: CAAGTGCAGGAGACTGGGGCAGAAGAAGGAGAAAAT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCATTTTCTCCTTCTTCTaGCCCAGTCTCCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSIFSFF*PSLLHL
Trigger: CAAGTGCAGGAGACTGGGGCAGAAGAAGGAGAAAAT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGGAAGATACGAGATaGTGGGAACAGAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVEDTR*WEQSRD
Trigger: ATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCCAACATACCCAGGCTaGTTTTCAGGAGTGAATCAC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSPTYPG*FSGVNH
Trigger: GTGATTCACTCCTGAAAAGCAGCCTGGGTATGTTGG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGTCGGCTTTCTCTTTaGCCCTCCAACTTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCRLSL*PSNFLV
Trigger: AACTAAGAAGTTGGAGGGGCAAAGAGAAAGCCGACA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGCCACTTCTGGTACTaGAGTTGCATTACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSHFWY*SCITLV
Trigger: CACAAGAGTAATGCAACTCCAGTACCAGAAGTGGCT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGGTTCCTTGCTCTGCTaGATCTCTTCACCAGGTATC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVGSLLC*ISSPGI
Trigger: GATACCTGGTGAAGAGATCCAGCAGAGCAAGGAACC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGTCTGGCTTATCAACTaGGCAACCTCGCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVVWLIN*ATSLTC
Trigger: ACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGAC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCCTGTTCCAGTGTCTaGCTTATCAACTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSCSSV*LINWAT
Trigger: GGTTGCCCAGTTGATAAGCCAGACACTGGAACAGGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGCTCATTCACTGTGTaGCATAATGTTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCSFTV*HNVWAS
Trigger: TGAGGCCCAAACATTATGCCACACAGTGAATGAGCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCTCTAATCCGCACTTaGAGGCCTTGCACTTCCACA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSLIRT*RPCTST
Trigger: TGTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTTTCCATTTTCTCTTaGGCCTTCCGAGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFSIFS*AFRAFS
Trigger: AGAGAAGGCTCGGAAGGCCCAAGAGAAAATGGAAAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCAGGGCAGGAAGAGGTaGGGACTTCTCTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTQGRKR*GLLLEH
Trigger: ATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCTG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTATCCAAAGTATAGATaGTTCTCTCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGYPKYR*FSQGCW
Trigger: CCAGCAGCCCTGAGAGAACCATCTATACTTTGGATA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAACACTACTTTCTTTTaGGAATGTACAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGNTTFF*ECTALP
Trigger: GGGGAGGGCTGTACATTCCCAAAAGAAAGTAGTGTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGGTCACAGACTGTGCTaGGTCCACACGCTTACATAT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVGHRLC*VHTLTY
Trigger: ATATGTAAGCGTGTGGACCCAGCACAGTCTGTGACC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CAA 72 bp GGCGCTCCATTAACAACACCAGGGTGTGTCATGCTCTaGGGTGGGGTCACACTAGTTCTCCAAGTGACAAAA +
Preference number: 4 (lower is better)
Translates to: GAPLTTPGCVML*GGVTLVLQVTK
Trigger: TTTTGTCACTTGGAGAACTAGTGTGACCCCACCCAAGAGCATGACACACCCTGGTGTTGTTAATGGAGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CAA 72 bp ATGGCAGGGTGCTCTCTGCCATGCAGACATGTGCAATaGCCATTTCAGGATCCCACACTGAAAATTCACGGC +
Preference number: 4 (lower is better)
Translates to: MAGCSLPCRHVQ*PFQDPTLKIHG
Trigger: GCCGTGAATTTTCAGTGTGGGATCCTGAAATGGCAATTGCACATGTCTGCATGGCAGAGAGCACCCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGTGGTTCGTTCACCTaGAGACTCAGTTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSGSFT*RLSFQH
Trigger: ATGTTGAAAACTGAGTCTTCAGGTGAACGAACCACT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGAGGAGAGGCACTTCTaGGAGTGGTTCGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHEERHF*EWFVHL
Trigger: CAGGTGAACGAACCACTCTCAGAAGTGCCTCTCCTC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTACTTTTCAGTGCCTaGAACTCAGTTCGATATGCA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGVLFSA*NSVRYA
Trigger: TGCATATCGAACTGAGTTTCAGGCACTGAAAAGTAC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTTTTGTTCCCCATCTaGCTTGGGTTTGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFLFPI*LGFVKG
Trigger: ACCTTTGACAAACCCAAGTCAGATGGGGAACAAAAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGTGAACTTGGAATATaGAGGGCCATCGTACATAGT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSELGI*RAIVHS
Trigger: ACTATGTACGATGGCCCTTCATATTCCAAGTTCACT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCAACACCTCGCTTGTTTaGAGGAGGCCAGGAATTAGA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVNTSLV*RRPGIR
Trigger: TCTAATTCCTGGCCTCCTTCAAACAAGCGAGGTGTT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCAAGCATCAGGAGAGGTaGAATCACCACCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVKHQER*NHHLQV
Trigger: AACTTGCAGGTGGTGATTTCACCTCTCCTGATGCTT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCCACAATCTGGTCATTaGCTTGTATTCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVPQSGH*LVFCHP
Trigger: GGGATGGCAGAATACAAGTCAATGACCAGATTGTGG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGCCCTTGGTGTTTCTaGGAACTGTTGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCPWCF*ELLLQN
Trigger: ATTTTGCAGCAACAGTTCTCAGAAACACCAAGGGCA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTGCCCTTGGTGTTTCTaGGAACTGTTGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSCPWCF*ELLLQN
Trigger: ATTTTGCAGCAACAGTTCTCAGAAACACCAAGGGCA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGGCTTTGAGTCTCTTTaGGATGCTCATTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSGFESL*DAHSLC
Trigger: ACACAGTGAATGAGCATCTCAAAGAGACTCAAAGCC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGAGGTCTGAGCTGTTaGACATGGCTTGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGGLSC*TWLGCP
Trigger: TGGACACCCAAGCCATGTTCAACAGCTCAGACCTCC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGACAATACTCTGGCAATaGAAAGAAAACAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGTILWQ*KENRPW
Trigger: CCAAGGCCTGTTTTCTTTTCATTGCCAGAGTATTGT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTAATGGGAAACCCTaGCCCAGATACAGCTCATAC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFNGKP*PRYSSY
Trigger: GTATGAGCTGTATCTGGGTCAGGGTTTCCCATTAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCAGGAGTGAATCACTaGAGCGCATTTGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSGVNH*SAFGFP
Trigger: AGGAAATCCAAATGCGCTTCAGTGATTCACTCCTGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCAGGAGTGAATCACTaGAGCGCATTTGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSGVNH*SAFGFP
Trigger: AGGAAATCCAAATGCGCTTCAGTGATTCACTCCTGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGCTGCTTTTCAGGAGTaGATCACTGAAGCGCATTTG +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVAAFQE*ITEAHL
Trigger: CAAATGCGCTTCAGTGATTCACTCCTGAAAAGCAGC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCTTTCCAGGAGAAGCTaGTTCTGTCGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVLSRRS*FCRLSL
Trigger: AAGAGAAAGCCGACAGAATCAGCTTCTCCTGGAAAG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCATCTTACTCACTGTTaGATCCCTAGCAGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRHLTHC*IPSSFG
Trigger: CCCAAAACTGCTAGGGATTCAACAGTGAGTAAGATG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCGGCATGCACATTGTTaGGAAGTTATCTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGRHAHC*EVICSL
Trigger: AAGAGAACAGATAACTTCTCAACAATGTGCATGCCG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGTTTTGGCAATGACTaGAGCATTCTCGTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCFGND*SILVGF
Trigger: GAACCCAACGAGAATGCTGCAGTCATTGCCAAAACA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTGTTTTGGCAATGACTaGAGCATTCTCGTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSCFGND*SILVGF
Trigger: GAACCCAACGAGAATGCTGCAGTCATTGCCAAAACA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCGGGTTCCTTGCTCTaGTGGATCTCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSGSLL*WISSPG
Trigger: ACCTGGTGAAGAGATCCAGCAGAGCAAGGAACCCGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGACCATCTTTGTCAATaGTGTCGGGAGTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRDHLCQ*CRESVD
Trigger: ATCAACAGACTCCCGACAGCATTGACAAAGATGGTC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTCGGACTTTGGCATTaGCTTACTTTCAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFGLWH*LTFSTR
Trigger: CCTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGGTGAAATCACCACCTaGAAGTTCTTTCCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSGEITT*KFFPLL
Trigger: CAACAGAGGAAAGAACTTGCAGGTGGTGATTTCACC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTCAAGTCCAGCATCTaGTCCAACACCCATTCCAAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFKSSI*SNTHSN
Trigger: ATTGGAATGGGTGTTGGAGCAGATGCTGGACTTGAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTGAGAACTGTTGCTaGAAAATTCTGTGTCACACC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSENCC*KILCHT
Trigger: GGTGTGACACAGAATTTTGCAGCAACAGTTCTCAGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTTCTCATTTTCTGCTaGCTGCAGCTTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFLIFC*LQLGLQ
Trigger: TTGAAGACCAAGCTGCAGGCAGCAGAAAATGAGAAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCTTGGCAAGATGTCTaGTTGCCATCCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSWQDV*LPSKFS
Trigger: GGAGAACTTGGATGGCAAGCAGACATCTTGCCAAGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTCTGTCTCTGGGACTaGTTCATTCAAGTCTTGACT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLCLWD*FIQVLT
Trigger: AGTCAAGACTTGAATGAAGCAGTCCCAGAGACAGAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCACCATGAGAAAGGCATaGAAGGGGAACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTTMRKA*KGNEWR
Trigger: CCTCCACTCGTTCCCCTTGCATGCCTTTCTCATGGT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTATTTCCATCCAACTaGAGGAGCTGTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLFPSN*RSCSPV
Trigger: CACTGGAGAACAGCTCCTGCAGTTGGATGGAAATAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGCCATGCAGACATGTaGAATTGCCATTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCHADM*NCHFRI
Trigger: GATCCTGAAATGGCAATTGCACATGTCTGCATGGCA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGATCTCATGGCAGGGTaGTCTCTGCCATGCAGACAT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTDLMAG*SLPCRH
Trigger: ATGTCTGCATGGCAGAGAGCACCCTGCCATGAGATC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGACAGTCCCATTTTGTaGCAGTTGAAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGDSPIL*QLKAEF
Trigger: AAACTCAGCTTTCAACTGGCACAAAATGGGACTGTC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCTCATTTTCCCTCTTaGCACTTTGTTTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPHFPS*HFVSNN
Trigger: GTTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCCAACATACCCAGGCTaGTTTTCAGGAGTGAATCAC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVPTYPG*FSGVNH
Trigger: GTGATTCACTCCTGAAAAGCAGCCTGGGTATGTTGG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTTGGGCCTATTCTATaGTGCTACTTCAAGTTACTC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGVGPIL*CYFKLL
Trigger: GAGTAACTTGAAGTAGCAGCATAGAATAGGCCCAAC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAGCCACTTCTGGTACTaGAGTTGCATTACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSHFWY*SCITLV
Trigger: CACAAGAGTAATGCAACTCCAGTACCAGAAGTGGCT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGGGATTTCGGACTTTaGCATTGCCTTACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRRDFGL*HCLTFS
Trigger: GCTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTTCTTTTCCACAACTaGATGCAGAAGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLLFHN*MQKHQE
Trigger: CTCCTGATGCTTCTGCATCCAGTTGTGGAAAAGAAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTTCTTTTCCACAACTaGATGCAGAAGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLLFHN*MQKHQE
Trigger: CTCCTGATGCTTCTGCATCCAGTTGTGGAAAAGAAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTTCTTCTTCATCTGTaGCATATTCTCCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLLLHL*HILLSR
Trigger: ACGAGACAGGAGAATATGCCACAGATGAAGAAGAAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTGCTGCCTGCAGCTTaGTCTTCAATTTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLLPAA*SSIFES
Trigger: AGATTCAAAAATTGAAGACCAAGCTGCAGGCAGCAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGCTCATTCACTGTGTaGCATAATGTTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCSFTV*HNVWAS
Trigger: TGAGGCCCAAACATTATGCCACACAGTGAATGAGCA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTGCTCATTCACTGTGTaGCATAATGTTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSCSFTV*HNVWAS
Trigger: TGAGGCCCAAACATTATGCCACACAGTGAATGAGCA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTCCTAGAGGGTCTCTaGCGTCTGTTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVLEGL*RLFFTE
Trigger: CTCTGTGAAGAACAGACGCCAGAGACCCTCTAGGAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGACACTGACTGTGTTTaGGAGACTGTCCATCATCAA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRDTDCV*ETVHHQ
Trigger: TTGATGATGGACAGTCTCCCAAACACAGTCAGTGTC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGACACTGACTGTGTTTaGGAGACTGTCCATCATCAA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSDTDCV*ETVHHQ
Trigger: TTGATGATGGACAGTCTCCCAAACACAGTCAGTGTC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTTTCCATTTTCTCTTaGGCCTTCCGAGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSFSIFS*AFRAFS
Trigger: AGAGAAGGCTCGGAAGGCCCAAGAGAAAATGGAAAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCAGGGCAGGAAGAGGTaGGGACTTCTCTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHQGRKR*GLLLEH
Trigger: ATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCTG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTAGAAGTTAAGTACTaGTCTCAGATCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLEVKY*SQISWQ
Trigger: CTGCCATGAGATCTGAGACCAGTACTTAACTTCTAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTATCCAAAGTATAGATaGTTCTCTCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRYPKYR*FSQGCW
Trigger: CCAGCAGCCCTGAGAGAACCATCTATACTTTGGATA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCACTGCAGTCCAGTCTaGGTGACAGATGACAGAAAA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVHCSPV*VTDDRK
Trigger: TTTTCTGTCATCTGTCACCCAGACTGGACTGCAGTG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAACACTACTTTCTTTTaGGAATGTACAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRNTTFF*ECTALP
Trigger: GGGGAGGGCTGTACATTCCCAAAAGAAAGTAGTGTT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTGGGAGGTGTTATCTaGCTGGAGTGCCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLGGVI*LECLLI
Trigger: AATTAAGAGGCACTCCAGCCAGATAACACCTCCCAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAGTGGTTCGTTCACCTaGAGACTCAGTTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSGSFT*RLSFQH
Trigger: ATGTTGAAAACTGAGTCTTCAGGTGAACGAACCACT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGTACTTTTCAGTGCCTaGAACTCAGTTCGATATGCA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSVLFSA*NSVRYA
Trigger: TGCATATCGAACTGAGTTTCAGGCACTGAAAAGTAC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTTTTGTTCCCCATCTaGCTTGGGTTTGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSFLFPI*LGFVKG
Trigger: ACCTTTGACAAACCCAAGTCAGATGGGGAACAAAAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCCCTTGTTTTGGCAATaGCTGCAGCATTCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTPLFWQ*LQHSRW
Trigger: CCAACGAGAATGCTGCAGTCATTGCCAAAACAAGGG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGTGAACTTGGAATATaGAGGGCCATCGTACATAGT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSELGI*RAIVHS
Trigger: ACTATGTACGATGGCCCTTCATATTCCAAGTTCACT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAGTGAACTTGGAATATaGAGGGCCATCGTACATAGT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSELGI*RAIVHS
Trigger: ACTATGTACGATGGCCCTTCATATTCCAAGTTCACT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCTTTCGAGTCTCAGTaGACTTGGAATATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSFESQ*TWNMKG
Trigger: GCCCTTCATATTCCAAGTTCACTGAGACTCGAAAGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGATAATGCCCAGTCACTaGGTATTCATTGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGIMPSH*VFIVFS
Trigger: GCTGAAAACAATGAATACTCAGTGACTGGGCATTAT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTGCATTACTCTTGTaGGCATCCTCTGTATCAACA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVALLL*ASSVST
Trigger: TGTTGATACAGAGGATGCTCACAAGAGTAATGCAAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGCACTTCCACAAGATaGGCTTTTTCCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCTSTR*AFSKSS
Trigger: AGAAGATTTGGAAAAAGCTCATCTTGTGGAAGTGCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTGCTTCAGTAGCCTaGATACCTCAGCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFASVA*IPQLPN
Trigger: ATTTGGAAGCTGAGGTATTCAGGCTACTGAAGCAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTGCTATCCACCGGGGTaGGGGGTGGAACACCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGCYPPG*GVEHQN
Trigger: ATTCTGGTGTTCCACCCCTCACCCCGGTGGATAGCA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCCAGTGGTTCTTCTTaGAATTCAGCTATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSSGSS*NSAMWS
Trigger: TGACCACATAGCTGAATTTCAAGAAGAACCACTGGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGGTATACGGTGTCAGTaGTCGTCCCAACAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTGIRCQ*SSQQVY
Trigger: ATACACCTGTTGGGACGATCACTGACACCGTATACC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTCAGGATCCCACACTaGAAATTCACGGCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFRIPH*KFTALH
Trigger: ATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTGAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCTCAAGTCTTATTCTaGAACTTGTCCTTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPQVLF*NLSFGK
Trigger: CTTTCCAAAGGACAAGTTTCAGAATAAGACTTGAGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGACAATACTCTGGCAATaGAAAGAAAACAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRTILWQ*KENRPW
Trigger: CCAAGGCCTGTTTTCTTTTCATTGCCAGAGTATTGT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCACTGGATCTCCTCTTaGAGTTTAGTCTGCATAACC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVHWISS*SLVCIT
Trigger: GGTTATGCAGACTAAACTTCAAGAGGAGATCCAGTG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGTGTAAGGTGGGAGTaGTATTCACACATATGTAGT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCVRWE*YSHICS
Trigger: ACTACATATGTGTGAATATCACTCCCACCTTACACA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTACAGCTCCAGGTCCTaGCTGACCTCGCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGYSSRS*LTSPSS
Trigger: GGAACTTGGCGAGGTCAGTCAGGACCTGGAGCTGTA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTGGCAATAAGGCTATaGTTACAGCTCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVAIRL*LQLQVL
Trigger: CAGGACCTGGAGCTGTAATCATAGCCTTATTGCCAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCATATTTCCTCCCCCTaGTCTGCTGGGAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGHISSP*SAGSPH
Trigger: GTGAGGGCTCCCAGCAGAGCAGGGGGAGGAAATATG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGTGTTCTCAAATACTaGACTCAGTTGACTCACAGT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSVLKY*TQLTHS
Trigger: ACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTCTGGTACTGGAGTTaGATTACTCTTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFWYWS*ITLVSI
Trigger: GATGCTCACAAGAGTAATGCAACTCCAGTACCAGAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTCTGGTACTGGAGTTaGATTACTCTTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSFWYWS*ITLVSI
Trigger: GATGCTCACAAGAGTAATGCAACTCCAGTACCAGAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGACCATCTTTGTCAATaGTGTCGGGAGTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVDHLCQ*CRESVD
Trigger: ATCAACAGACTCCCGACAGCATTGACAAAGATGGTC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCTGAGAACTGTTGCTaGAAAATTCTGTGTCACACC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSENCC*KILCHT
Trigger: GGTGTGACACAGAATTTTGCAGCAACAGTTCTCAGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCTCTGTCTCTGGGACTaGTTCATTCAAGTCTTGACT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVLCLWD*FIQVLT
Trigger: AGTCAAGACTTGAATGAAGCAGTCCCAGAGACAGAG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTAATTTTTCCTCCTTaGACCGCCAATGAACTGGAT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLIFPP*TANELD
Trigger: ATCCAGTTCATTGGCGGTGCAAGGAGGAAAAATTAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTGCTCGGTCCTGGGATaGTGTCATTCCAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHCSVLG*CHSKSL
Trigger: AAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTGGCAGGGTGCTCTCTaGCATGCAGACATGTGCAAT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHWQGAL*HADMCN
Trigger: ATTGCACATGTCTGCATGGCAGAGAGCACCCTGCCA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGATACAGCTCATACAATaGTTTCTGTCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRIQLIQ*FLSAAW
Trigger: CCAAGCTGCAGACAGAAAGCATTGTATGAGCTGTAT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGACAGTCCCATTTTGTaGCAGTTGAAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSDSPIL*QLKAEF
Trigger: AAACTCAGCTTTCAACTGGCACAAAATGGGACTGTC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCCTCATTTTCCCTCTTaGCACTTTGTTTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSPHFPS*HFVSNN
Trigger: GTTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAACCCTAGTGACCACTaGCCACCAAAATGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHNPSDH*PPKCPS
Trigger: TGAGGGGCATTTTGGTGGGCAGTGGTCACTAGGGTT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGGCCTATTCTATGCTaGTACTTCAAGTTACTCAAA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGPILC*YFKLLK
Trigger: TTTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGTTGGGCCTATTCTATaGTGCTACTTCAAGTTACTC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSVGPIL*CYFKLL
Trigger: GAGTAACTTGAAGTAGCAGCATAGAATAGGCCCAAC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTCCCCATCTGACTTaGGTTTGTCAAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVPHLT*VCQRYF
Trigger: AAAGTACCTTTGACAAACCCAAGTCAGATGGGGAAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGCTTTCTCTTTCTTTaGGGAATAGCGGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSFLFL*GIAVVL
Trigger: CAGAACAACCGCTATTCCCCAAAGAAAGAGAAAGCT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAGCTTTCTCTTTCTTTaGGGAATAGCGGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSFLFL*GIAVVL
Trigger: CAGAACAACCGCTATTCCCCAAAGAAAGAGAAAGCT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCAGTTGACTCACAGTTaGGGAGACAGCCTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHQLTHS*GDSLSS
Trigger: CGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTTAGAAGCCACTTCTaGTACTGGAGTTGCATTACT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFRSHF*YWSCIT
Trigger: AGTAATGCAACTCCAGTACCAGAAGTGGCTTCTAAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCATCTTCTAACAGTTaGCTTTGTGGTGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRASSNS*LCGEGI
Trigger: AATCCCTTCACCACAAAGCCAACTGTTAGAAGATGC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCTCGCTCACTTGTCCTaGTTTTTCCCGCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTLAHLS*FFPPNN
Trigger: GTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTCTGGCTTATCAACTaGGCAACCTCGCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVWLIN*ATSLTC
Trigger: ACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTTCTTCTTCATCTGTaGCATATTCTCCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLLLHL*HILLSR
Trigger: ACGAGACAGGAGAATATGCCACAGATGAAGAAGAAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTGCTGCCTGCAGCTTaGTCTTCAATTTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLLPAA*SSIFES
Trigger: AGATTCAAAAATTGAAGACCAAGCTGCAGGCAGCAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCTCTAATCCGCACTTaGAGGCCTTGCACTTCCACA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSLIRT*RPCTST
Trigger: TGTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGTCCTAGAGGGTCTCTaGCGTCTGTTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHVLEGL*RLFFTE
Trigger: CTCTGTGAAGAACAGACGCCAGAGACCCTCTAGGAC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCATTTCTGGGTCCAGTaGTTCTTCTTGAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRHFWVQ*FFLKFS
Trigger: GCTGAATTTCAAGAAGAACCACTGGACCCAGAAATG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGACTGAGAGAGCCCTaGTGTTTTAGGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGLREP*CFRFCS
Trigger: GGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATACCACTGCTCGGTCCTaGGATGCTGTCATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHTTARS*DAVIPR
Trigger: TCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTAGAAGTTAAGTACTaGTCTCAGATCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLEVKY*SQISWQ
Trigger: CTGCCATGAGATCTGAGACCAGTACTTAACTTCTAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTATGGATGTTTTGGCTaGGGGTGGTGGCACATGCCT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHYGCFG*GWWHMP
Trigger: AGGCATGTGCCACCACCCCCAGCCAAAACATCCATA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTCCAACTTCTTAGTTaGGCCTATTCTATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLQLLS*AYSMLL
Trigger: TAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTTGGGAGGTGTTATCTaGCTGGAGTGCCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVLGGVI*LECLLI
Trigger: AATTAAGAGGCACTCCAGCCAGATAACACCTCCCAA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCGATATGCATTCCTGTaGGGAGAGGCACTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHRYAFL*GEALLR
Trigger: TCTCAGAAGTGCCTCTCCTCACAGGAATGCATATCG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCCCTTGTTTTGGCAATaGCTGCAGCATTCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHPLFWQ*LQHSRW
Trigger: CCAACGAGAATGCTGCAGTCATTGCCAAAACAAGGG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGCGGTTGTTCTGTCCTaGTTCATGCACACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHAVVLS*FMHTSL
Trigger: GAGAGAAGTGTGCATGAATCAGGACAGAACAACCGC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAATACTGCACTCAGTTaGCTCACAGTTGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTNTALS*LTVGET
Trigger: TGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCATAATGCCCAGTCACTaGGTATTCATTGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSIMPSH*VFIVFS
Trigger: GCTGAAAACAATGAATACTCAGTGACTGGGCATTAT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTAGAATCCTTCAGGTaGCCAAATGTGTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLESFR*PNVSRF
Trigger: AAATCTTGACACATTTGGTCACCTGAAGGATTCTAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGTTGCATTACTCTTGTaGGCATCCTCTGTATCAACA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVVALLL*ASSVST
Trigger: TGTTGATACAGAGGATGCTCACAAGAGTAATGCAAC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCAGTTGGCTTTGTGGTaGAGGGATTTCGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHQLALW*RDFGLW
Trigger: CCAAAGTCCGAAATCCCTTCACCACAAAGCCAACTG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAAGTTCATACTCAGCTaGAGCAGCCACAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHKFILS*SSHRVN
Trigger: GTTGACCCTGTGGCTGCTTCAGCTGAGTATGAACTT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTTCTGTTACTGTCTTaGCGAATATTCCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLLLLS*RIFPAF
Trigger: AAAAGCTGGGAATATTCGTCAAGACAGTAACAGAAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGCTTGTGTCCAGTTCTaGTGGGGAAAACATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHACVQF*WGKHVL
Trigger: GAGGACATGTTTTCCCCATCAGAACTGGACACAAGC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTTTGCTTCAGTAGCCTaGATACCTCAGCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVFASVA*IPQLPN
Trigger: ATTTGGAAGCTGAGGTATTCAGGCTACTGAAGCAAA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGATTCTTCCACATCATaGTCAGACTTTGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGDSSTS*SDFEVE
Trigger: TTCTACTTCAAAGTCTGATCATGATGTGGAAGAATC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGCCGCTGAGGTCTGCTaGACTGGTACTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREAAEVC*TGTAGT
Trigger: AGTCCCAGCAGTACCAGTTCAGCAGACCTCAGCGGC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGTATACGGTGTCAGTaGTCGTCCCAACAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGIRCQ*SSQQVY
Trigger: ATACACCTGTTGGGACGATCACTGACACCGTATACC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCTCACTGTCCAGACTaGGAATTAAGAGCAAATCTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSHCPD*ELRANL
Trigger: AAGATTTGCTCTTAATTCTCAGTCTGGACAGTGAGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCAACGTTTCTGAGGATTaGATGAAGGGTCTGTACCTA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVNVSED*MKGLYL
Trigger: TAGGTACAGACCCTTCATTCAATCCTCAGAAACGTT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGCAATCAAACCAAATaGCTTTTACAATTTCATCCG +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGNQTK*LLQFHP
Trigger: CGGATGAAATTGTAAAAGTCATTTGGTTTGATTGCC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCAAGACATTGGAGCCTTaGTTAGGTATCATGCACTAC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVKTLEP*LGIMHY
Trigger: GTAGTGCATGATACCTAATCAAGGCTCCAATGTCTT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCGGCATGCACATTGTTaGGAAGTTATCTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVRHAHC*EVICSL
Trigger: AAGAGAACAGATAACTTCTCAACAATGTGCATGCCG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTGTGTAAGGTGGGAGTaGTATTCACACATATGTAGT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSCVRWE*YSHICS
Trigger: ACTACATATGTGTGAATATCACTCCCACCTTACACA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGTGTAAGGTGGGAGTaGTATTCACACATATGTAGT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCVRWE*YSHICS
Trigger: ACTACATATGTGTGAATATCACTCCCACCTTACACA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGTGGCAATAAGGCTATaGTTACAGCTCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHVAIRL*LQLQVL
Trigger: CAGGACCTGGAGCTGTAATCATAGCCTTATTGCCAC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGCATACATTTCTTCTaGGCTCCAACTCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCIHFF*APTQQY
Trigger: ATATTGCTGAGTTGGAGCTCAGAAGAAATGTATGCA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTGCTTGAATGCCTCTaGAAACCAAAGAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLLECL*KPKSKE
Trigger: TTCCTTACTCTTTGGTTTTCAGAGGCATTCAAGCAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAAAGGTACTTTTCAGTaGCTGAAACTCAGTTCGATA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGKGTFQ*LKLSSI
Trigger: TATCGAACTGAGTTTCAGGCACTGAAAAGTACCTTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTCTGTCCTGATTCATaGACACTTCTCTCAAACATC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFCPDS*TLLSNI
Trigger: GATGTTTGAGAGAAGTGTGCATGAATCAGGACAGAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTCTGTCCTGATTCATaGACACTTCTCTCAAACATC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSFCPDS*TLLSNI
Trigger: GATGTTTGAGAGAAGTGTGCATGAATCAGGACAGAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGTGTTCTCAAATACTaGACTCAGTTGACTCACAGT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSVLKY*TQLTHS
Trigger: ACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTTCTGGTACTGGAGTTaGATTACTCTTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVFWYWS*ITLVSI
Trigger: GATGCTCACAAGAGTAATGCAACTCCAGTACCAGAA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCCTCTGTTGCTTTGCTaGCTCCCTTCCAACCAAATT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTPLLLC*LPSNQI
Trigger: AATTTGGTTGGAAGGGAGGCAGCAAAGCAACAGAGG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCAATGGCCATGTCGCTaGCAGGAAGGACAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGQWPCR*QEGQVL
Trigger: TAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTCTGCTTCTGTAACTaGATGTTTGATTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLCFCN*MFDLQL
Trigger: GAGTTGCAAATCAAACATGCAGTTACAGAAGCAGAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTCTGCTTCTGTAACTaGATGTTTGATTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLCFCN*MFDLQL
Trigger: GAGTTGCAAATCAAACATGCAGTTACAGAAGCAGAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCATTTTCTGCTGCCTaGAGCTTGGTCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSFSAA*SLVFNF
Trigger: AAAATTGAAGACCAAGCTGCAGGCAGCAGAAAATGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCATTTTCTGCTGCCTaGAGCTTGGTCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSFSAA*SLVFNF
Trigger: AAAATTGAAGACCAAGCTGCAGGCAGCAGAAAATGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTTTCTCATTTTCTGCTaGCTGCAGCTTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVFLIFC*LQLGLQ
Trigger: TTGAAGACCAAGCTGCAGGCAGCAGAAAATGAGAAA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTAATTTTTCCTCCTTaGACCGCCAATGAACTGGAT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLIFPP*TANELD
Trigger: ATCCAGTTCATTGGCGGTGCAAGGAGGAAAAATTAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGCAAGCAGAATGACTTaGTTGCCTTTTCCCTTAGTA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVASRMT*LPFPLV
Trigger: TACTAAGGGAAAAGGCAAGCAAGTCATTCTGCTTGC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTACACTCAAAAGCCTTaGCGAGGCTCTAAATATGGA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVYTQKP*RGSKYG
Trigger: TCCATATTTAGAGCCTCGGCAAGGCTTTTGAGTGTA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCAGTTTACATCTTATaGTTTGTGGGGCAATCAAAC +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSVYIL*FVGQSN
Trigger: GTTTGATTGCCCCACAAAGCATAAGATGTAAACTGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATACAATGCTTTCTGTCTaGAGCTTGGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHTMLSV*SLASSP
Trigger: TGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGACAGTCCCATTTTGTaGCAGTTGAAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVDSPIL*QLKAEF
Trigger: AAACTCAGCTTTCAACTGGCACAAAATGGGACTGTC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGCCTATTCTATGCTaGTACTTCAAGTTACTCAAA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGPILC*YFKLLK
Trigger: TTTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGTTCCCCATCTGACTTaGGTTTGTCAAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVVPHLT*VCQRYF
Trigger: AAAGTACCTTTGACAAACCCAAGTCAGATGGGGAAC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTAGAAGCCACTTCTaGTACTGGAGTTGCATTACT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFRSHF*YWSCIT
Trigger: AGTAATGCAACTCCAGTACCAGAAGTGGCTTCTAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGTTCCTTGCTCTGCTaGATCTCTTCACCAGGTATC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGSLLC*ISSPGI
Trigger: GATACCTGGTGAAGAGATCCAGCAGAGCAAGGAACC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGCATCTTCTAACAGTTaGCTTTGTGGTGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVASSNS*LCGEGI
Trigger: AATCCCTTCACCACAAAGCCAACTGTTAGAAGATGC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGTCTGAATTATACCTaGATCTCACCCTATACACAT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSLNYT*ISPYTH
Trigger: ATGTGTATAGGGTGAGATCCAGGTATAATTCAGACT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCTCGCTCACTTGTCCTaGTTTTTCCCGCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHLAHLS*FFPPNN
Trigger: GTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTCTTCACAGAGAGCTaGGCTCGAGTTTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFFTES*ARVFSA
Trigger: AGCACTGAAAACTCGAGCCCAGCTCTCTGTGAAGAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCATTTCTGGGTCCAGTaGTTCTTCTTGAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVHFWVQ*FFLKFS
Trigger: GCTGAATTTCAAGAAGAACCACTGGACCCAGAAATG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGATGCCCTTAGTGATTTaGGATCTTTGGCATCATCTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRMPLVI*DLWHHL
Trigger: AAGATGATGCCAAAGATCCCAAATCACTAAGGGCAT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCATGCCCTTAGTGATTTaGGATCTTTGGCATCATCTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSMPLVI*DLWHHL
Trigger: AAGATGATGCCAAAGATCCCAAATCACTAAGGGCAT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAAAGTACCTCTCAAATaGTATACGGTGTCAGTGATC +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRKVPLK*YTVSVI
Trigger: GATCACTGACACCGTATACCATTTGAGAGGTACTTT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCTAACTGAGCCCACCTaGGAAATCTTGAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVLTEPT*EILSRK
Trigger: TTTTCTACTCAAGATTTCCCAGGTGGGCTCAGTTAG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTGAAACTTGTCCTTTaGAAAGTGGATAACCTCATT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLKLVL*KVDNLI
Trigger: AATGAGGTTATCCACTTTCCAAAGGACAAGTTTCAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTTCTGTCTGCAGCTTaGCCTCCTCACCACACATTC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHFLSAA*PPHHTF
Trigger: GAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCACTGAAGCGCATTTaGATTTCCTATAACACTACT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSLKRI*ISYNTT
Trigger: AGTAGTGTTATAGGAAATCCAAATGCGCTTCAGTGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCCACTCTTGAGGATCTaGAATCAGGTCACAGACTGT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTPLLRI*NQVTDC
Trigger: ACAGTCTGTGACCTGATTCCAGATCCTCAAGAGTGG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAGAAGAGGAGGGATTTaGGTTTCTCTTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSRRGGI*VSLVCF
Trigger: AAAGCAAACAAGAGAAACCCAAATCCCTCCTCTTCT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCTTTCGAGTCTCAGTaGACTTGGAATATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSFESQ*TWNMKG
Trigger: GCCCTTCATATTCCAAGTTCACTGAGACTCGAAAGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTAGAATCCTTCAGGTaGCCAAATGTGTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLESFR*PNVSRF
Trigger: AAATCTTGACACATTTGGTCACCTGAAGGATTCTAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCTTCTGTTACTGTCTTaGCGAATATTCCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVLLLLS*RIFPAF
Trigger: AAAAGCTGGGAATATTCGTCAAGACAGTAACAGAAG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCCACAATCTGGTCATTaGCTTGTATTCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHPQSGH*LVFCHP
Trigger: GGGATGGCAGAATACAAGTCAATGACCAGATTGTGG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAACTCTTTGAACTTGTaGCTGAGCTTGCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTNSLNL*LSLLVS
Trigger: GGACACAAGCAAGCTCAGTCACAAGTTCAAAGAGTT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGGCTTTGAGTCTCTTTaGGATGCTCATTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTGFESL*DAHSLC
Trigger: ACACAGTGAATGAGCATCTCAAAGAGACTCAAAGCC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTGCACTTCCACAAGATaGGCTTTTTCCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVCTSTR*AFSKSS
Trigger: AGAAGATTTGGAAAAAGCTCATCTTGTGGAAGTGCA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGCTATCCACCGGGGTaGGGGGTGGAACACCAGAAT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKCYPPG*GVEHQN
Trigger: ATTCTGGTGTTCCACCCCTCACCCCGGTGGATAGCA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACTGCTCCTAAGCCGCTaGGGTCTGCTGAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRELLLSR*GLLNWY
Trigger: GTACCAGTTCAGCAGACCTCAGCGGCTTAGGAGCAG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTTTCACTTCAGGGGTaGAAAGCCAATGTTCATAAT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSFSLQG*KANVHN
Trigger: ATTATGAACATTGGCTTTTCACCCCTGAAGTGAAAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCTCACTGTCCAGACTaGGAATTAAGAGCAAATCTT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSHCPD*ELRANL
Trigger: AAGATTTGCTCTTAATTCTCAGTCTGGACAGTGAGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCACTGGATCTCCTCTTaGAGTTTAGTCTGCATAACC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTHWISS*SLVCIT
Trigger: GGTTATGCAGACTAAACTTCAAGAGGAGATCCAGTG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGCTCCAGGTCCTGACTaGCCTCGCCAAGTTCCATAC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKAPGPD*PRQVPY
Trigger: GTATGGAACTTGGCGAGGTCAGTCAGGACCTGGAGC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGCAATATGCAATCTTaGCATCAAAGCATTAGCCAA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSNMQS*HQSISQ
Trigger: TTGGCTAATGCTTTGATGTCAAGATTGCATATTGCT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTGCATACATTTCTTCTaGGCTCCAACTCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVCIHFF*APTQQY
Trigger: ATATTGCTGAGTTGGAGCTCAGAAGAAATGTATGCA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACATATTTCCTCCCCCTaGTCTGCTGGGAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKHISSP*SAGSPH
Trigger: GTGAGGGCTCCCAGCAGAGCAGGGGGAGGAAATATG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTTCTGTCCTGATTCATaGACACTTCTCTCAAACATC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVFCPDS*TLLSNI
Trigger: GATGTTTGAGAGAAGTGTGCATGAATCAGGACAGAA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCCAAGGAATCAGTACTaGCTCTGTTGGACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHPRNQY*LCWTWN
Trigger: GTTCCAAGTCCAACAGAGGCAGTACTGATTCCTTGG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCGGGTTCCTTGCTCTaGTGGATCTCTTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSGSLL*WISSPG
Trigger: ACCTGGTGAAGAGATCCAGCAGAGCAAGGAACCCGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTCGGACTTTGGCATTaGCTTACTTTCAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFGLWH*LTFSTR
Trigger: CCTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGGTGAAATCACCACCTaGAAGTTCTTTCCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTGEITT*KFFPLL
Trigger: CAACAGAGGAAAGAACTTGCAGGTGGTGATTTCACC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCTCTGCTTCTGTAACTaGATGTTTGATTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVLCFCN*MFDLQL
Trigger: GAGTTGCAAATCAAACATGCAGTTACAGAAGCAGAG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCCACTTCTTTCCCTTaGTGGAATTCCTTCGCAAAG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSTSFP*WNSFAK
Trigger: CTTTGCGAAGGAATTCCAGCAAGGGAAAGAAGTGGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAATTCAGATACATACTaGTCCAGATTTAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGNSDTY*SRFRLI
Trigger: AATGAGCCTAAATCTGGAGCAGTATGTATCTGAATT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCCAACTCAGCAATATaGAATCTTGACATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSNSAI*NLDIKA
Trigger: TGCTTTGATGTCAAGATTGCATATTGCTGAGTTGGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGTTATCTGGCTGGAGTaGCTCTTAATTCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSVIWLE*LLILFK
Trigger: CTTAAAAAGAATTAAGAGGCACTCCAGCCAGATAAC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTATCTGGCTGGAGTaGCTCTTAATTCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVIWLE*LLILFK
Trigger: CTTAAAAAGAATTAAGAGGCACTCCAGCCAGATAAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCAGTTGACTCACAGTTaGGGAGACAGCCTCAGTTCG +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGQLTHS*GDSLSS
Trigger: CGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAGGGATTTCGGACTTTaGCATTGCCTTACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTRDFGL*HCLTFS
Trigger: GCTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGTCTGAATTATACCTaGATCTCACCCTATACACAT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSLNYT*ISPYTH
Trigger: ATGTGTATAGGGTGAGATCCAGGTATAATTCAGACT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTGCTCATTCACTGTGTaGCATAATGTTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTCSFTV*HNVWAS
Trigger: TGAGGCCCAAACATTATGCCACACAGTGAATGAGCA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCAGGCGCTCTGTCTCTaGGACTGCTTCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGQALCL*DCFIQV
Trigger: GACTTGAATGAAGCAGTCCCAGAGACAGAGCGCCTG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTAATATTTTCTTGTTaGTGGTTTGGTGATGGCAAG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVIFSC*WFGDGK
Trigger: CTTGCCATCACCAAACCACCAACAAGAAAATATTAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTGCAAGGGGAACGAGTaGAGGTCTGAGCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGCKGNE*RSELLN
Trigger: GTTCAACAGCTCAGACCTCCACTCGTTCCCCTTGCA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTTTCCATTTTCTCTTaGGCCTTCCGAGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFSIFS*AFRAFS
Trigger: AGAGAAGGCTCGGAAGGCCCAAGAGAAAATGGAAAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCTAATCACCAGTATTaGGTCAAGAAAAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSNHQY*VKKSTS
Trigger: AGAGGTACTTTTCTTGACCCAATACTGGTGATTAGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTGGTCTCAGATCTCATaGCAGGGTGCTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGWSQIS*QGALCH
Trigger: ATGGCAGAGAGCACCCTGCCATGAGATCTGAGACCA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTGAAACTTGTCCTTTaGAAAGTGGATAACCTCATT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLKLVL*KVDNLI
Trigger: AATGAGGTTATCCACTTTCCAAAGGACAAGTTTCAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGAAGATACGAGATGCTaGGAACAGAGCAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHEDTRC*EQSRDS
Trigger: GGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGACCATTTTTGTAGCTTaGGACTGGGATATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGTIFVA*DWDILR
Trigger: TCTTAAAATATCCCAGTCCCAAGCTACAAAAATGGT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCACTGAAGCGCATTTaGATTTCCTATAACACTACT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSLKRI*ISYNTT
Trigger: AGTAGTGTTATAGGAAATCCAAATGCGCTTCAGTGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCAGGTATTGTTAGATTaGTCAGAAAACAAAAGACCA +
Preference number: 4 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGQVLLD*SENKRP
Trigger: TGGTCTTTTGTTTTCTGACCAATCTAACAATACCTG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAGTGGTTCGTTCACCTaGAGACTCAGTTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSGSFT*RLSFQH
Trigger: ATGTTGAAAACTGAGTCTTCAGGTGAACGAACCACT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTACTTTTCAGTGCCTaGAACTCAGTTCGATATGCA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVLFSA*NSVRYA
Trigger: TGCATATCGAACTGAGTTTCAGGCACTGAAAAGTAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTCTTTCGAGTCTCAGTaGACTTGGAATATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSFESQ*TWNMKG
Trigger: GCCCTTCATATTCCAAGTTCACTGAGACTCGAAAGA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGCGGTTGTTCTGTCCTaGTTCATGCACACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGAVVLS*FMHTSL
Trigger: GAGAGAAGTGTGCATGAATCAGGACAGAACAACCGC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTGCCCTTGGTGTTTCTaGGAACTGTTGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHCPWCF*ELLLQN
Trigger: ATTTTGCAGCAACAGTTCTCAGAAACACCAAGGGCA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTGGAACACCAGAATCTaGTTCTGGAGAAGACGTTCT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHWNTRI*FWRRRS
Trigger: AGAACGTCTTCTCCAGAATCAGATTCTGGTGTTCCA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCCAGTGGTTCTTCTTaGAATTCAGCTATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSSGSS*NSAMWS
Trigger: TGACCACATAGCTGAATTTCAAGAAGAACCACTGGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGATTCTTCCACATCATaGTCAGACTTTGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVDSSTS*SDFEVE
Trigger: TTCTACTTCAAAGTCTGATCATGATGTGGAAGAATC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGCGCAGGCAGGTTCCTaGAGGAATAGGATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKAQAGS*RNRILS
Trigger: GGAAAGGATCCTATTCCTTCAGGAACCTGCCTGCGC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTCAGGATCCCACACTaGAAATTCACGGCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGFRIPH*KFTALH
Trigger: ATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTGAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTCAGGAGTGAATCACTaGAGCGCATTTGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSGVNH*SAFGFP
Trigger: AGGAAATCCAAATGCGCTTCAGTGATTCACTCCTGA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCATCTTACTCACTGTTaGATCCCTAGCAGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHHLTHC*IPSSFG
Trigger: CCCAAAACTGCTAGGGATTCAACAGTGAGTAAGATG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCGGCATGCACATTGTTaGGAAGTTATCTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTRHAHC*EVICSL
Trigger: AAGAGAACAGATAACTTCTCAACAATGTGCATGCCG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCAGCAATATGCAATCTTaGCATCAAAGCATTAGCCAA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSNMQS*HQSISQ
Trigger: TTGGCTAATGCTTTGATGTCAAGATTGCATATTGCT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTCTGGTACTGGAGTTaGATTACTCTTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFWYWS*ITLVSI
Trigger: GATGCTCACAAGAGTAATGCAACTCCAGTACCAGAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCTGAGAACTGTTGCTaGAAAATTCTGTGTCACACC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSENCC*KILCHT
Trigger: GGTGTGACACAGAATTTTGCAGCAACAGTTCTCAGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACAATGGCCATGTCGCTaGCAGGAAGGACAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKQWPCR*QEGQVL
Trigger: TAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTTCTCATTTTCTGCTaGCTGCAGCTTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFLIFC*LQLGLQ
Trigger: TTGAAGACCAAGCTGCAGGCAGCAGAAAATGAGAAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTATTTCCATCCAACTaGAGGAGCTGTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHLFPSN*RSCSPV
Trigger: CACTGGAGAACAGCTCCTGCAGTTGGATGGAAATAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGAGGGTATGTGTTACTaGTCACCAGCACCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKEGMCY*SPAPSA
Trigger: AGCCGAGGGTGCTGGTGAGCAGTAACACATACCCTC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTACACTCAAAAGCCTTaGCGAGGCTCTAAATATGGA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTYTQKP*RGSKYG
Trigger: TCCATATTTAGAGCCTCGGCAAGGCTTTTGAGTGTA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTTGGGCCTATTCTATaGTGCTACTTCAAGTTACTC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVGPIL*CYFKLL
Trigger: GAGTAACTTGAAGTAGCAGCATAGAATAGGCCCAAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTTTTCCTCCCAATGTaGCAGGAAACAATAGATCCC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFFLPM*QETIDP
Trigger: GGGATCTATTGTTTCCTGGCACATTGGGAGGAAAAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAGCTTTCTCTTTCTTTaGGGAATAGCGGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSFLFL*GIAVVL
Trigger: CAGAACAACCGCTATTCCCCAAAGAAAGAGAAAGCT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAGCCACTTCTGGTACTaGAGTTGCATTACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSHFWY*SCITLV
Trigger: CACAAGAGTAATGCAACTCCAGTACCAGAAGTGGCT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAGGGATTTCGGACTTTaGCATTGCCTTACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHRDFGL*HCLTFS
Trigger: GCTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGCATCTTCTAACAGTTaGCTTTGTGGTGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTASSNS*LCGEGI
Trigger: AATCCCTTCACCACAAAGCCAACTGTTAGAAGATGC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTGTGCATGTACACATaGGAACCATCAAAATTATTT +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLCMYT*EPSKLF
Trigger: AAATAATTTTGATGGTTCCCATGTGTACATGCACAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTGTGCATGTACACATaGGAACCATCAAAATTATTT +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLCMYT*EPSKLF
Trigger: AAATAATTTTGATGGTTCCCATGTGTACATGCACAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAATTTTCCTATTTGCTaGGATTTCTTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRNFPIC*DFFFFW
Trigger: CCAGAAGAAGAAGAAATCCCAGCAAATAGGAAAATT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAATTTTCCTATTTGCTaGGATTTCTTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSNFPIC*DFFFFW
Trigger: CCAGAAGAAGAAGAAATCCCAGCAAATAGGAAAATT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCCTGTTCCAGTGTCTaGCTTATCAACTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSCSSV*LINWAT
Trigger: GGTTGCCCAGTTGATAAGCCAGACACTGGAACAGGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCTCTAATCCGCACTTaGAGGCCTTGCACTTCCACA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSLIRT*RPCTST
Trigger: TGTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGTAATATTTTCTTGTTaGTGGTTTGGTGATGGCAAG +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVVIFSC*WFGDGK
Trigger: CTTGCCATCACCAAACCACCAACAAGAAAATATTAC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGCACCGCCAATGAACTaGATGCCCTTAGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGAPPMN*MPLVIW
Trigger: CCAAATCACTAAGGGCATCCAGTTCATTGGCGGTGC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAAGTATGGAAAGGAATaGTTCGGAAAAACCATTCAA +
Preference number: 4 (lower is better)
Translates to: RAGRGGDFSWSISIICKRKYGKE*FGKTIQ
Trigger: TTGAATGGTTTTTCCGAACCATTCCTTTCCATACTT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCTCCAACTTCTTAGTTaGGCCTATTCTATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTLQLLS*AYSMLL
Trigger: TAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAGTGGTTCGTTCACCTaGAGACTCAGTTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSGSFT*RLSFQH
Trigger: ATGTTGAAAACTGAGTCTTCAGGTGAACGAACCACT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTAATACTGCACTCAGTTaGCTCACAGTTGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGNTALS*LTVGET
Trigger: TGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCATAATGCCCAGTCACTaGGTATTCATTGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTIMPSH*VFIVFS
Trigger: GCTGAAAACAATGAATACTCAGTGACTGGGCATTAT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTGTCGGGAGTCTGTTaGTTAGATGTGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLSGVC*LDVESS
Trigger: CGAGGACTCCACATCTAATCAACAGACTCCCGACAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTAGTTTTCAGTGCTTTTaGATCCAGGCGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSFQCF*IQALCL
Trigger: GAGACAGAGCGCCTGGATTCAAAAGCACTGAAAACT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGAACGAGTGGAGGTCTaGGCTGTTGAACATGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREERVEV*AVEHGL
Trigger: CAAGCCATGTTCAACAGCTCAGACCTCCACTCGTTC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACTGCTCCTAAGCCGCTaGGGTCTGCTGAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALLLSR*GLLNWY
Trigger: GTACCAGTTCAGCAGACCTCAGCGGCTTAGGAGCAG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAACGTTTCTGAGGATTaGATGAAGGGTCTGTACCTA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHNVSED*MKGLYL
Trigger: TAGGTACAGACCCTTCATTCAATCCTCAGAAACGTT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCAATGGAGCAAAAGGTaGCAGTCCCATTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGQWSKR*QSHFVP
Trigger: TGGCACAAAATGGGACTGTCACCTTTTGCTCCATTG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTTTCCAGGAGAAGCTaGTTCTGTCGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLSRRS*FCRLSL
Trigger: AAGAGAAAGCCGACAGAATCAGCTTCTCCTGGAAAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTGCATACATTTCTTCTaGGCTCCAACTCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTCIHFF*APTQQY
Trigger: ATATTGCTGAGTTGGAGCTCAGAAGAAATGTATGCA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCCTCTGTTGCTTTGCTaGCTCCCTTCCAACCAAATT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGPLLLC*LPSNQI
Trigger: AATTTGGTTGGAAGGGAGGCAGCAAAGCAACAGAGG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAACCATGAGAAAGGCATaGAAGGGGAACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRETMRKA*KGNEWR
Trigger: CCTCCACTCGTTCCCCTTGCATGCCTTTCTCATGGT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCAATTCAGATACATACTaGTCCAGATTTAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVNSDTY*SRFRLI
Trigger: AATGAGCCTAAATCTGGAGCAGTATGTATCTGAATT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACACCAGGGTGTGTCATaGTCTTGGGTGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAHQGVS*SWVGSH
Trigger: GTGTGACCCCACCCAAGAGCATGACACACCCTGGTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGGCAGGGTGCTCTCTaGCATGCAGACATGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKWQGAL*HADMCN
Trigger: ATTGCACATGTCTGCATGGCAGAGAGCACCCTGCCA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCCTCATTTTCCCTCTTaGCACTTTGTTTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHPHFPS*HFVSNN
Trigger: GTTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAACCCTAGTGACCACTaGCCACCAAAATGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRENPSDH*PPKCPS
Trigger: TGAGGGGCATTTTGGTGGGCAGTGGTCACTAGGGTT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCAGGTCACAGACTGTaGTGGGTCCACACGCTTACA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSGHRL*WVHTLT
Trigger: TGTAAGCGTGTGGACCCAGCACAGTCTGTGACCTGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGTTCCCCATCTGACTTaGGTTTGTCAAAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHVPHLT*VCQRYF
Trigger: AAAGTACCTTTGACAAACCCAAGTCAGATGGGGAAC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCTGCTGCCTGCAGCTTaGTCTTCAATTTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHLLPAA*SSIFES
Trigger: AGATTCAAAAATTGAAGACCAAGCTGCAGGCAGCAG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGTCCTAGAGGGTCTCTaGCGTCTGTTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREVLEGL*RLFFTE
Trigger: CTCTGTGAAGAACAGACGCCAGAGACCCTCTAGGAC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAACCACTGCTCGGTCCTaGGATGCTGTCATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRETTARS*DAVIPR
Trigger: TCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATGGTCTCAGATCTCATaGCAGGGTGCTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREWSQIS*QGALCH
Trigger: ATGGCAGAGAGCACCCTGCCATGAGATCTGAGACCA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGGTCTCAGATCTCATaGCAGGGTGCTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKWSQIS*QGALCH
Trigger: ATGGCAGAGAGCACCCTGCCATGAGATCTGAGACCA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGTAGTCCCAGCTACTTaGGAAGCTGAAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREVVPAT*EAEAGG
Trigger: TCCTCCTGCTTCAGCTTCCCAAGTAGCTGGGACTAC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCTCCAACTTCTTAGTTaGGCCTATTCTATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHLQLLS*AYSMLL
Trigger: TAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCCACTCTTGAGGATCTaGAATCAGGTCACAGACTGT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGPLLRI*NQVTDC
Trigger: ACAGTCTGTGACCTGATTCCAGATCCTCAAGAGTGG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCAGGTATTGTTAGATTaGTCAGAAAACAAAAGACCA +
Preference number: 4 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVQVLLD*SENKRP
Trigger: TGGTCTTTTGTTTTCTGACCAATCTAACAATACCTG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACGATATGCATTCCTGTaGGGAGAGGCACTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRERYAFL*GEALLR
Trigger: TCTCAGAAGTGCCTCTCCTCACAGGAATGCATATCG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACCCTTGTTTTGGCAATaGCTGCAGCATTCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREPLFWQ*LQHSRW
Trigger: CCAACGAGAATGCTGCAGTCATTGCCAAAACAAGGG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCTTCTCTGAGGAGATaGATGTCCACCTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSSLRR*MSTFPP
Trigger: AGGGGGAAAGGTGGACATTCATCTCCTCAGAGAAGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGCGGTTGTTCTGTCCTaGTTCATGCACACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREAVVLS*FMHTSL
Trigger: GAGAGAAGTGTGCATGAATCAGGACAGAACAACCGC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACAGCCTTCTCAGAAATaGTGGCACTGGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKQPSQK*WHWENQ
Trigger: CTGATTCTCCCAGTGCCATCATTTCTGAGAAGGCTG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACAGTTGGCTTTGTGGTaGAGGGATTTCGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREQLALW*RDFGLW
Trigger: CCAAAGTCCGAAATCCCTTCACCACAAAGCCAACTG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGCTTGTGTCCAGTTCTaGTGGGGAAAACATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREACVQF*WGKHVL
Trigger: GAGGACATGTTTTCCCCATCAGAACTGGACACAAGC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGCTTGTGTCCAGTTCTaGTGGGGAAAACATGTCCTC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKACVQF*WGKHVL
Trigger: GAGGACATGTTTTCCCCATCAGAACTGGACACAAGC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTAACTCTTTGAACTTGTaGCTGAGCTTGCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGNSLNL*LSLLVS
Trigger: GGACACAAGCAAGCTCAGTCACAAGTTCAAAGAGTT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTGCACTTCCACAAGATaGGCTTTTTCCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHCTSTR*AFSKSS
Trigger: AGAAGATTTGGAAAAAGCTCATCTTGTGGAAGTGCA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCCAGTCTCCTGCACTTaGCTTAGTTTGGTGAAACAT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGPVSCT*LSLVKH
Trigger: ATGTTTCACCAAACTAAGTCAAGTGCAGGAGACTGG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCAGGAGTGAATCACTaGAGCGCATTTGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSGVNH*SAFGFP
Trigger: AGGAAATCCAAATGCGCTTCAGTGATTCACTCCTGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCACCATAAATAGAACTTaGTGCTTTCACTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTTINRT*CFHFPG
Trigger: TCCTGGAAAGTGAAAGCATCAAGTTCTATTTATGGT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGTGGCAATAAGGCTATaGTTACAGCTCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKVAIRL*LQLQVL
Trigger: CAGGACCTGGAGCTGTAATCATAGCCTTATTGCCAC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAGCAATATGCAATCTTaGCATCAAAGCATTAGCCAA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSNMQS*HQSISQ
Trigger: TTGGCTAATGCTTTGATGTCAAGATTGCATATTGCT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTAAACTCAGTTCGATATaGATTCCTGTGAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGKLSSI*IPVRRG
Trigger: GCCTCTCCTCACAGGAATGCATATCGAACTGAGTTT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTCTGTCCTGATTCATaGACACTTCTCTCAAACATC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHFCPDS*TLLSNI
Trigger: GATGTTTGAGAGAAGTGTGCATGAATCAGGACAGAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTCTGTCTCTGGGACTaGTTCATTCAAGTCTTGACT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLCLWD*FIQVLT
Trigger: AGTCAAGACTTGAATGAAGCAGTCCCAGAGACAGAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGAGGGTATGTGTTACTaGTCACCAGCACCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAEGMCY*SPAPSA
Trigger: AGCCGAGGGTGCTGGTGAGCAGTAACACATACCCTC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAACAATGCTTTCTGTCTaGAGCTTGGCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKTMLSV*SLASSP
Trigger: TGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTGTCGGCTTTCTCTTTaGCCCTCCAACTTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGCRLSL*PSNFLV
Trigger: AACTAAGAAGTTGGAGGGGCAAAGAGAAAGCCGACA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCTACACAAACGGCATaGACATTGTTGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSTQTA*TLLRSY
Trigger: ATAACTTCTCAACAATGTGCATGCCGTTTGTGTAGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCCAACTCAGCAATATaGAATCTTGACATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSNSAI*NLDIKA
Trigger: TGCTTTGATGTCAAGATTGCATATTGCTGAGTTGGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTGCCAGACATTCCTTaGAATTCAGCCACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLPDIP*NSATVF
Trigger: GAACACTGTGGCTGAATTGCAAGGAATGTCTGGCAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACAGTACTGCCTCTGTTaGACTTGGAACCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREQYCLC*TWNLPI
Trigger: AATGGGGAGGTTCCAAGTCCAACAGAGGCAGTACTG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTTAGAAGCCACTTCTaGTACTGGAGTTGCATTACT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHFRSHF*YWSCIT
Trigger: AGTAATGCAACTCCAGTACCAGAAGTGGCTTCTAAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGGTTCCTTGCTCTGCTaGATCTCTTCACCAGGTATC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREGSLLC*ISSPGI
Trigger: GATACCTGGTGAAGAGATCCAGCAGAGCAAGGAACC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTAGGGATTTCGGACTTTaGCATTGCCTTACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGRDFGL*HCLTFS
Trigger: GCTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTTCTTTTCCACAACTaGATGCAGAAGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLLFHN*MQKHQE
Trigger: CTCCTGATGCTTCTGCATCCAGTTGTGGAAAAGAAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCTCTAATCCGCACTTaGAGGCCTTGCACTTCCACA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSLIRT*RPCTST
Trigger: TGTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTAATATTTTCTTGTTaGTGGTTTGGTGATGGCAAG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVIFSC*WFGDGK
Trigger: CTTGCCATCACCAAACCACCAACAAGAAAATATTAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGCACCGCCAATGAACTaGATGCCCTTAGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKAPPMN*MPLVIW
Trigger: CCAAATCACTAAGGGCATCCAGTTCATTGGCGGTGC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGACACTGACTGTGTTTaGGAGACTGTCCATCATCAA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGDTDCV*ETVHHQ
Trigger: TTGATGATGGACAGTCTCCCAAACACAGTCAGTGTC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTTTCCATTTTCTCTTaGGCCTTCCGAGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGFSIFS*AFRAFS
Trigger: AGAGAAGGCTCGGAAGGCCCAAGAGAAAATGGAAAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGTCATGCTCTTGGGTaGGGTCACACTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKCHALG*GHTSSP
Trigger: TGGAGAACTAGTGTGACCCCACCCAAGAGCATGACA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCACTGAAGCGCATTTaGATTTCCTATAACACTACT +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSLKRI*ISYNTT
Trigger: AGTAGTGTTATAGGAAATCCAAATGCGCTTCAGTGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTTTTGTTCCCCATCTaGCTTGGGTTTGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGFLFPI*LGFVKG
Trigger: ACCTTTGACAAACCCAAGTCAGATGGGGAACAAAAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGGCTTCATTCTTCTCTaGGGAGATGAATGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKGFILL*GDECPP
Trigger: AGGTGGACATTCATCTCCTCAGAGAAGAATGAAGCC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAATACTGCACTCAGTTaGCTCACAGTTGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRENTALS*LTVGET
Trigger: TGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTAGAATCCTTCAGGTaGCCAAATGTGTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHLESFR*PNVSRF
Trigger: AAATCTTGACACATTTGGTCACCTGAAGGATTCTAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACTGTCGGGAGTCTGTTaGTTAGATGTGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALSGVC*LDVESS
Trigger: CGAGGACTCCACATCTAATCAACAGACTCCCGACAG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATGTCTCTCCCCAGTCTaGATTATACCTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRECLSPV*IIPGSH
Trigger: GTGAGATCCAGGTATAATTCAGACTGGGGAGAGACA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGTCTCTCCCCAGTCTaGATTATACCTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKCLSPV*IIPGSH
Trigger: GTGAGATCCAGGTATAATTCAGACTGGGGAGAGACA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACCACAATCTGGTCATTaGCTTGTATTCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREPQSGH*LVFCHP
Trigger: GGGATGGCAGAATACAAGTCAATGACCAGATTGTGG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTTGCTTCAGTAGCCTaGATACCTCAGCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGFASVA*IPQLPN
Trigger: ATTTGGAAGCTGAGGTATTCAGGCTACTGAAGCAAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGATTCTTCCACATCATaGTCAGACTTTGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHDSSTS*SDFEVE
Trigger: TTCTACTTCAAAGTCTGATCATGATGTGGAAGAATC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAACCCTCGGCTGTAGTTaGCGTCATCTTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKTLGCS*RHLFCL
Trigger: AAGACAGAAAAGATGACGTCAACTACAGCCGAGGGT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGCAATCAAACCAAATaGCTTTTACAATTTCATCCG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGNQTK*LLQFHP
Trigger: CGGATGAAATTGTAAAAGTCATTTGGTTTGATTGCC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGTGATGTTGAGGGTGTaGAATCAATTGTCAATCCCA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGVMLRV*NQLSIP
Trigger: TGGGATTGACAATTGATTTCACACCCTCAACATCAC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGCTGCTTTTCAGGAGTaGATCACTGAAGCGCATTTG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKAAFQE*ITEAHL
Trigger: CAAATGCGCTTCAGTGATTCACTCCTGAAAAGCAGC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACTTTCCAGGAGAAGCTaGTTCTGTCGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRELSRRS*FCRLSL
Trigger: AAGAGAAAGCCGACAGAATCAGCTTCTCCTGGAAAG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACCAAGGAATCAGTACTaGCTCTGTTGGACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREPRNQY*LCWTWN
Trigger: GTTCCAAGTCCAACAGAGGCAGTACTGATTCCTTGG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACCTCTGTTGCTTTGCTaGCTCCCTTCCAACCAAATT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKPLLLC*LPSNQI
Trigger: AATTTGGTTGGAAGGGAGGCAGCAAAGCAACAGAGG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTTCTCATTTTCTGCTaGCTGCAGCTTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGFLIFC*LQLGLQ
Trigger: TTGAAGACCAAGCTGCAGGCAGCAGAAAATGAGAAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCTTGGCAAGATGTCTaGTTGCCATCCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSWQDV*LPSKFS
Trigger: GGAGAACTTGGATGGCAAGCAGACATCTTGCCAAGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATGCTCGGTCCTGGGATaGTGTCATTCCAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVACSVLG*CHSKSL
Trigger: AAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTCAGTTTACATCTTATaGTTTGTGGGGCAATCAAAC +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSVYIL*FVGQSN
Trigger: GTTTGATTGCCCCACAAAGCATAAGATGTAAACTGA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCCTAACTTAACATTCTaGAGAAAATTCCTGATTCAG +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTPNLTF*RKFLIQ
Trigger: CTGAATCAGGAATTTTCTGCAGAATGTTAAGTTAGG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCAGGTCACAGACTGTaGTGGGTCCACACGCTTACA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASGHRL*WVHTLT
Trigger: TGTAAGCGTGTGGACCCAGCACAGTCTGTGACCTGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTCTACACAAACGGCATaGACATTGTTGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSTQTA*TLLRSY
Trigger: ATAACTTCTCAACAATGTGCATGCCGTTTGTGTAGA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGCATCTTCTAACAGTTaGCTTTGTGGTGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGASSNS*LCGEGI
Trigger: AATCCCTTCACCACAAAGCCAACTGTTAGAAGATGC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAGTCTGAATTATACCTaGATCTCACCCTATACACAT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSLNYT*ISPYTH
Trigger: ATGTGTATAGGGTGAGATCCAGGTATAATTCAGACT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACAGGCGCTCTGTCTCTaGGACTGCTTCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAQALCL*DCFIQV
Trigger: GACTTGAATGAAGCAGTCCCAGAGACAGAGCGCCTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTCTTCACAGAGAGCTaGGCTCGAGTTTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREFFTES*ARVFSA
Trigger: AGCACTGAAAACTCGAGCCCAGCTCTCTGTGAAGAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAACCACTGCTCGGTCCTaGGATGCTGTCATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVATTARS*DAVIPR
Trigger: TCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTCTAATCACCAGTATTaGGTCAAGAAAAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSNHQY*VKKSTS
Trigger: AGAGGTACTTTTCTTGACCCAATACTGGTGATTAGA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTAACTGAGCCCACCTaGGAAATCTTGAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLTEPT*EILSRK
Trigger: TTTTCTACTCAAGATTTCCCAGGTGGGCTCAGTTAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGAAGATACGAGATGCTaGGAACAGAGCAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKEDTRC*EQSRDS
Trigger: GGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCACCATTTTTGTAGCTTaGGACTGGGATATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTTIFVA*DWDILR
Trigger: TCTTAAAATATCCCAGTCCCAAGCTACAAAAATGGT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACACTGCAGTCCAGTCTaGGTGACAGATGACAGAAAA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREHCSPV*VTDDRK
Trigger: TTTTCTGTCATCTGTCACCCAGACTGGACTGCAGTG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCAGGTATTGTTAGATTaGTCAGAAAACAAAAGACCA +
Preference number: 4 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTQVLLD*SENKRP
Trigger: TGGTCTTTTGTTTTCTGACCAATCTAACAATACCTG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCTTCTCTGAGGAGATaGATGTCCACCTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASSLRR*MSTFPP
Trigger: AGGGGGAAAGGTGGACATTCATCTCCTCAGAGAAGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGCGGTTGTTCTGTCCTaGTTCATGCACACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAAVVLS*FMHTSL
Trigger: GAGAGAAGTGTGCATGAATCAGGACAGAACAACCGC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACAGCCTTCTCAGAAATaGTGGCACTGGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAQPSQK*WHWENQ
Trigger: CTGATTCTCCCAGTGCCATCATTTCTGAGAAGGCTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAAGTTCATACTCAGCTaGAGCAGCCACAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAKFILS*SSHRVN
Trigger: GTTGACCCTGTGGCTGCTTCAGCTGAGTATGAACTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTTCTGTTACTGTCTTaGCGAATATTCCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLLLLS*RIFPAF
Trigger: AAAAGCTGGGAATATTCGTCAAGACAGTAACAGAAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAAACTCTTTGAACTTGTaGCTGAGCTTGCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKNSLNL*LSLLVS
Trigger: GGACACAAGCAAGCTCAGTCACAAGTTCAAAGAGTT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGGCTTTGAGTCTCTTTaGGATGCTCATTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKGFESL*DAHSLC
Trigger: ACACAGTGAATGAGCATCTCAAAGAGACTCAAAGCC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGGAACACCAGAATCTaGTTCTGGAGAAGACGTTCT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKWNTRI*FWRRRS
Trigger: AGAACGTCTTCTCCAGAATCAGATTCTGGTGTTCCA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCTCACTGTCCAGACTaGGAATTAAGAGCAAATCTT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSHCPD*ELRANL
Trigger: AAGATTTGCTCTTAATTCTCAGTCTGGACAGTGAGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACATCTTACTCACTGTTaGATCCCTAGCAGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKHLTHC*IPSSFG
Trigger: CCCAAAACTGCTAGGGATTCAACAGTGAGTAAGATG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGTGGCAATAAGGCTATaGTTACAGCTCCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAVAIRL*LQLQVL
Trigger: CAGGACCTGGAGCTGTAATCATAGCCTTATTGCCAC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGACCATCTTTGTCAATaGTGTCGGGAGTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREDHLCQ*CRESVD
Trigger: ATCAACAGACTCCCGACAGCATTGACAAAGATGGTC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGGTGAAATCACCACCTaGAAGTTCTTTCCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKGEITT*KFFPLL
Trigger: CAACAGAGGAAAGAACTTGCAGGTGGTGATTTCACC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTCTGTCTCTGGGACTaGTTCATTCAAGTCTTGACT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLCLWD*FIQVLT
Trigger: AGTCAAGACTTGAATGAAGCAGTCCCAGAGACAGAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTAATTTTTCCTCCTTaGACCGCCAATGAACTGGAT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLIFPP*TANELD
Trigger: ATCCAGTTCATTGGCGGTGCAAGGAGGAAAAATTAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR GCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAATTCAGATACATACTaGTCCAGATTTAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHNSDTY*SRFRLI
Trigger: AATGAGCCTAAATCTGGAGCAGTATGTATCTGAATT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGCCATGCAGACATGTaGAATTGCCATTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKCHADM*NCHFRI
Trigger: GATCCTGAAATGGCAATTGCACATGTCTGCATGGCA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGTCGGCTTTCTCTTTaGCCCTCCAACTTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKCRLSL*PSNFLV
Trigger: AACTAAGAAGTTGGAGGGGCAAAGAGAAAGCCGACA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACAGTACTGCCTCTGTTaGACTTGGAACCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAQYCLC*TWNLPI
Trigger: AATGGGGAGGTTCCAAGTCCAACAGAGGCAGTACTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAGGGATTTCGGACTTTaGCATTGCCTTACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRERDFGL*HCLTFS
Trigger: GCTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACTTCTTTTCCACAACTaGATGCAGAAGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRELLFHN*MQKHQE
Trigger: CTCCTGATGCTTCTGCATCCAGTTGTGGAAAAGAAG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACTCGCTCACTTGTCCTaGTTTTTCCCGCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALAHLS*FFPPNN
Trigger: GTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCCTGTTCCAGTGTCTaGCTTATCAACTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASCSSV*LINWAT
Trigger: GGTTGCCCAGTTGATAAGCCAGACACTGGAACAGGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGCTCAAAGACTTCAATaGCCATGTCGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAAQRLQ*PCRCQE
Trigger: TTCCTGGCAGCGACATGGCCATTGAAGTCTTTGAGC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGACACTGACTGTGTTTaGGAGACTGTCCATCATCAA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKDTDCV*ETVHHQ
Trigger: TTGATGATGGACAGTCTCCCAAACACAGTCAGTGTC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTGTCCTTTGGAAAGTaGATAACCTCATTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHLSFGK*ITSFLE
Trigger: CTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTTCTGTCTGCAGCTTaGCCTCCTCACCACACATTC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFLSAA*PPHHTF
Trigger: GAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGGTCACAGACTGTGCTaGGTCCACACGCTTACATAT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAGHRLC*VHTLTY
Trigger: ATATGTAAGCGTGTGGACCCAGCACAGTCTGTGACC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTGGGAGGTGTTATCTaGCTGGAGTGCCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLGGVI*LECLLI
Trigger: AATTAAGAGGCACTCCAGCCAGATAACACCTCCCAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCAGGTATTGTTAGATTaGTCAGAAAACAAAAGACCA +
Preference number: 4 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHQVLLD*SENKRP
Trigger: TGGTCTTTTGTTTTCTGACCAATCTAACAATACCTG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAGTGGTTCGTTCACCTaGAGACTCAGTTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRESGSFT*RLSFQH
Trigger: ATGTTGAAAACTGAGTCTTCAGGTGAACGAACCACT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGTACTTTTCAGTGCCTaGAACTCAGTTCGATATGCA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREVLFSA*NSVRYA
Trigger: TGCATATCGAACTGAGTTTCAGGCACTGAAAAGTAC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTTTTGTTCCCCATCTaGCTTGGGTTTGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREFLFPI*LGFVKG
Trigger: ACCTTTGACAAACCCAAGTCAGATGGGGAACAAAAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAATACTGCACTCAGTTaGCTCACAGTTGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVANTALS*LTVGET
Trigger: TGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAACACCTCGCTTGTTTaGAGGAGGCCAGGAATTAGA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVANTSLV*RRPGIR
Trigger: TCTAATTCCTGGCCTCCTTCAAACAAGCGAGGTGTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGTTGCATTACTCTTGTaGGCATCCTCTGTATCAACA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREVALLL*ASSVST
Trigger: TGTTGATACAGAGGATGCTCACAAGAGTAATGCAAC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATGTCTCTCCCCAGTCTaGATTATACCTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVACLSPV*IIPGSH
Trigger: GTGAGATCCAGGTATAATTCAGACTGGGGAGAGACA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTTTCACTTCAGGGGTaGAAAGCCAATGTTCATAAT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGFSLQG*KANVHN
Trigger: ATTATGAACATTGGCTTTTCACCCCTGAAGTGAAAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAACAATACTCTGGCAATaGAAAGAAAACAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKTILWQ*KENRPW
Trigger: CCAAGGCCTGTTTTCTTTTCATTGCCAGAGTATTGT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAAACGTTTCTGAGGATTaGATGAAGGGTCTGTACCTA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKNVSED*MKGLYL
Trigger: TAGGTACAGACCCTTCATTCAATCCTCAGAAACGTT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAAAGACATTGGAGCCTTaGTTAGGTATCATGCACTAC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKKTLEP*LGIMHY
Trigger: GTAGTGCATGATACCTAATCAAGGCTCCAATGTCTT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGTGATGTTGAGGGTGTaGAATCAATTGTCAATCCCA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREVMLRV*NQLSIP
Trigger: TGGGATTGACAATTGATTTCACACCCTCAACATCAC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACAATGGAGCAAAAGGTaGCAGTCCCATTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAQWSKR*QSHFVP
Trigger: TGGCACAAAATGGGACTGTCACCTTTTGCTCCATTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTACCATAAATAGAACTTaGTGCTTTCACTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGTINRT*CFHFPG
Trigger: TCCTGGAAAGTGAAAGCATCAAGTTCTATTTATGGT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACCAAGGAATCAGTACTaGCTCTGTTGGACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAPRNQY*LCWTWN
Trigger: GTTCCAAGTCCAACAGAGGCAGTACTGATTCCTTGG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATACACTCAAAAGCCTTaGCGAGGCTCTAAATATGGA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREYTQKP*RGSKYG
Trigger: TCCATATTTAGAGCCTCGGCAAGGCTTTTGAGTGTA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCAGTTTACATCTTATaGTTTGTGGGGCAATCAAAC +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSVYIL*FVGQSN
Trigger: GTTTGATTGCCCCACAAAGCATAAGATGTAAACTGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAATACAGCTCATACAATaGTTTCTGTCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREIQLIQ*FLSAAW
Trigger: CCAAGCTGCAGACAGAAAGCATTGTATGAGCTGTAT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACCTCATTTTCCCTCTTaGCACTTTGTTTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREPHFPS*HFVSNN
Trigger: GTTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACCAACATACCCAGGCTaGTTTTCAGGAGTGAATCAC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAPTYPG*FSGVNH
Trigger: GTGATTCACTCCTGAAAAGCAGCCTGGGTATGTTGG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCTACACAAACGGCATaGACATTGTTGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSTQTA*TLLRSY
Trigger: ATAACTTCTCAACAATGTGCATGCCGTTTGTGTAGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGTTATCTGGCTGGAGTaGCTCTTAATTCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGVIWLE*LLILFK
Trigger: CTTAAAAAGAATTAAGAGGCACTCCAGCCAGATAAC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTTCTTCTTCATCTGTaGCATATTCTCCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLLLHL*HILLSR
Trigger: ACGAGACAGGAGAATATGCCACAGATGAAGAAGAAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACTTCTTCTTCATCTGTaGCATATTCTCCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRELLLHL*HILLSR
Trigger: ACGAGACAGGAGAATATGCCACAGATGAAGAAGAAG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTGCTGCCTGCAGCTTaGTCTTCAATTTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLLPAA*SSIFES
Trigger: AGATTCAAAAATTGAAGACCAAGCTGCAGGCAGCAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTCTTCACAGAGAGCTaGGCTCGAGTTTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFFTES*ARVFSA
Trigger: AGCACTGAAAACTCGAGCCCAGCTCTCTGTGAAGAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTAACTGAGCCCACCTaGGAAATCTTGAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLTEPT*EILSRK
Trigger: TTTTCTACTCAAGATTTCCCAGGTGGGCTCAGTTAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACACTGCAGTCCAGTCTaGGTGACAGATGACAGAAAA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAHCSPV*VTDDRK
Trigger: TTTTCTGTCATCTGTCACCCAGACTGGACTGCAGTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTCCAACTTCTTAGTTaGGCCTATTCTATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLQLLS*AYSMLL
Trigger: TAGCAGCATAGAATAGGCCCAACTAAGAAGTTGGAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACCACTCTTGAGGATCTaGAATCAGGTCACAGACTGT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAPLLRI*NQVTDC
Trigger: ACAGTCTGTGACCTGATTCCAGATCCTCAAGAGTGG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAATAATGCCCAGTCACTaGGTATTCATTGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKIMPSH*VFIVFS
Trigger: GCTGAAAACAATGAATACTCAGTGACTGGGCATTAT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATGCCCTTGGTGTTTCTaGGAACTGTTGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVACPWCF*ELLLQN
Trigger: ATTTTGCAGCAACAGTTCTCAGAAACACCAAGGGCA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAACTCTTTGAACTTGTaGCTGAGCTTGCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVANSLNL*LSLLVS
Trigger: GGACACAAGCAAGCTCAGTCACAAGTTCAAAGAGTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATGCACTTCCACAAGATaGGCTTTTTCCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRECTSTR*AFSKSS
Trigger: AGAAGATTTGGAAAAAGCTCATCTTGTGGAAGTGCA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCTCACTGTCCAGACTaGGAATTAAGAGCAAATCTT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSHCPD*ELRANL
Trigger: AAGATTTGCTCTTAATTCTCAGTCTGGACAGTGAGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACCAGTCTCCTGCACTTaGCTTAGTTTGGTGAAACAT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAPVSCT*LSLVKH
Trigger: ATGTTTCACCAAACTAAGTCAAGTGCAGGAGACTGG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACCTCAAGTCTTATTCTaGAACTTGTCCTTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREPQVLF*NLSFGK
Trigger: CTTTCCAAAGGACAAGTTTCAGAATAAGACTTGAGG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATGTGTAAGGTGGGAGTaGTATTCACACATATGTAGT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRECVRWE*YSHICS
Trigger: ACTACATATGTGTGAATATCACTCCCACCTTACACA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATGCATACATTTCTTCTaGGCTCCAACTCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKCIHFF*APTQQY
Trigger: ATATTGCTGAGTTGGAGCTCAGAAGAAATGTATGCA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTGCTTGAATGCCTCTaGAAACCAAAGAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLLECL*KPKSKE
Trigger: TTCCTTACTCTTTGGTTTTCAGAGGCATTCAAGCAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTGCTTGAATGCCTCTaGAAACCAAAGAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRELLECL*KPKSKE
Trigger: TTCCTTACTCTTTGGTTTTCAGAGGCATTCAAGCAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAATGCCTTCCAAAGATTaGAGAAGAGGAGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAMPSKD*RRGGIW
Trigger: CCAAATCCCTCCTCTTCTTCAATCTTTGGAAGGCAT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAAACTCAGTTCGATATaGATTCCTGTGAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAKLSSI*IPVRRG
Trigger: GCCTCTCCTCACAGGAATGCATATCGAACTGAGTTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGACCATCTTTGTCAATaGTGTCGGGAGTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVADHLCQ*CRESVD
Trigger: ATCAACAGACTCCCGACAGCATTGACAAAGATGGTC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTCAAGTCCAGCATCTaGTCCAACACCCATTCCAAT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFKSSI*SNTHSN
Trigger: ATTGGAATGGGTGTTGGAGCAGATGCTGGACTTGAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTCTGCTTCTGTAACTaGATGTTTGATTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLCFCN*MFDLQL
Trigger: GAGTTGCAAATCAAACATGCAGTTACAGAAGCAGAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCATTTTCTGCTGCCTaGAGCTTGGTCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSFSAA*SLVFNF
Trigger: AAAATTGAAGACCAAGCTGCAGGCAGCAGAAAATGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATGCCATGCAGACATGTaGAATTGCCATTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVACHADM*NCHFRI
Trigger: GATCCTGAAATGGCAATTGCACATGTCTGCATGGCA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGGGCCTATTCTATGCTaGTACTTCAAGTTACTCAAA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREGPILC*YFKLLK
Trigger: TTTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGGGCCTATTCTATGCTaGTACTTCAAGTTACTCAAA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKGPILC*YFKLLK
Trigger: TTTGAGTAACTTGAAGTAGCAGCATAGAATAGGCCC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTTAGAAGCCACTTCTaGTACTGGAGTTGCATTACT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREFRSHF*YWSCIT
Trigger: AGTAATGCAACTCCAGTACCAGAAGTGGCTTCTAAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTGTGCATGTACACATaGGAACCATCAAAATTATTT +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLCMYT*EPSKLF
Trigger: AAATAATTTTGATGGTTCCCATGTGTACATGCACAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTAATTTTCCTATTTGCTaGGATTTCTTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGNFPIC*DFFFFW
Trigger: CCAGAAGAAGAAGAAATCCCAGCAAATAGGAAAATT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAATGCCCTTAGTGATTTaGGATCTTTGGCATCATCTT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREMPLVI*DLWHHL
Trigger: AAGATGATGCCAAAGATCCCAAATCACTAAGGGCAT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAAAAGTACCTCTCAAATaGTATACGGTGTCAGTGATC +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKKVPLK*YTVSVI
Trigger: GATCACTGACACCGTATACCATTTGAGAGGTACTTT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATATCCAAAGTATAGATaGTTCTCTCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAYPKYR*FSQGCW
Trigger: CCAGCAGCCCTGAGAGAACCATCTATACTTTGGATA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTGGGAGGTGTTATCTaGCTGGAGTGCCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALGGVI*LECLLI
Trigger: AATTAAGAGGCACTCCAGCCAGATAACACCTCCCAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
3UTR CAA 72 bp CTCCCAACAAAGCATAACCTATACCCCAAAACACTTTaGGCTATTGTTAGAATCATACTGAGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LPTKHNLYPKTL*AIVRIILSSPL
Trigger: TAAAGGAGAGCTCAGTATGATTCTAACAATAGCCAAAAGTGTTTTGGGGTATAGGTTATGCTTTGTTGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAGTGAACTTGGAATATaGAGGGCCATCGTACATAGT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASELGI*RAIVHS
Trigger: ACTATGTACGATGGCCCTTCATATTCCAAGTTCACT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTAGAATCCTTCAGGTaGCCAAATGTGTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRELESFR*PNVSRF
Trigger: AAATCTTGACACATTTGGTCACCTGAAGGATTCTAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGTTGCATTACTCTTGTaGGCATCCTCTGTATCAACA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAVALLL*ASSVST
Trigger: TGTTGATACAGAGGATGCTCACAAGAGTAATGCAAC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTTGCTTCAGTAGCCTaGATACCTCAGCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFASVA*IPQLPN
Trigger: ATTTGGAAGCTGAGGTATTCAGGCTACTGAAGCAAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTTTCACTTCAGGGGTaGAAAGCCAATGTTCATAAT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKFSLQG*KANVHN
Trigger: ATTATGAACATTGGCTTTTCACCCCTGAAGTGAAAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAACGTTTCTGAGGATTaGATGAAGGGTCTGTACCTA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVANVSED*MKGLYL
Trigger: TAGGTACAGACCCTTCATTCAATCCTCAGAAACGTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGGCAATCAAACCAAATaGCTTTTACAATTTCATCCG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKGNQTK*LLQFHP
Trigger: CGGATGAAATTGTAAAAGTCATTTGGTTTGATTGCC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGTGATGTTGAGGGTGTaGAATCAATTGTCAATCCCA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAVMLRV*NQLSIP
Trigger: TGGGATTGACAATTGATTTCACACCCTCAACATCAC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGCAAGCAGAATGACTTaGTTGCCTTTTCCCTTAGTA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAASRMT*LPFPLV
Trigger: TACTAAGGGAAAAGGCAAGCAAGTCATTCTGCTTGC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATCAGTTTACATCTTATaGTTTGTGGGGCAATCAAAC +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRESVYIL*FVGQSN
Trigger: GTTTGATTGCCCCACAAAGCATAAGATGTAAACTGA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAATACAGCTCATACAATaGTTTCTGTCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAIQLIQ*FLSAAW
Trigger: CCAAGCTGCAGACAGAAAGCATTGTATGAGCTGTAT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATCTACACAAACGGCATaGACATTGTTGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRESTQTA*TLLRSY
Trigger: ATAACTTCTCAACAATGTGCATGCCGTTTGTGTAGA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATCTAATCACCAGTATTaGGTCAAGAAAAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRESNHQY*VKKSTS
Trigger: AGAGGTACTTTTCTTGACCCAATACTGGTGATTAGA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAATAATGCCCAGTCACTaGGTATTCATTGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAIMPSH*VFIVFS
Trigger: GCTGAAAACAATGAATACTCAGTGACTGGGCATTAT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACTTCTGTTACTGTCTTaGCGAATATTCCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALLLLS*RIFPAF
Trigger: AAAAGCTGGGAATATTCGTCAAGACAGTAACAGAAG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTGCTTGAATGCCTCTaGAAACCAAAGAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALLECL*KPKSKE
Trigger: TTCCTTACTCTTTGGTTTTCAGAGGCATTCAAGCAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAGTGTTCTCAAATACTaGACTCAGTTGACTCACAGT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASVLKY*TQLTHS
Trigger: ACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCATTTTCTGCTGCCTaGAGCTTGGTCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASFSAA*SLVFNF
Trigger: AAAATTGAAGACCAAGCTGCAGGCAGCAGAAAATGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAATTCAGATACATACTaGTCCAGATTTAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQRENSDTY*SRFRLI
Trigger: AATGAGCCTAAATCTGGAGCAGTATGTATCTGAATT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACCTAACTTAACATTCTaGAGAAAATTCCTGATTCAG +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREPNLTF*RKFLIQ
Trigger: CTGAATCAGGAATTTTCTGCAGAATGTTAAGTTAGG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATATTGTTATTGCAGTTaGCAGACATTCCTTGCAATT +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREYCYCS*QTFLAI
Trigger: AATTGCAAGGAATGTCTGGCAACTGCAATAACAATA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTTAGAAGCCACTTCTaGTACTGGAGTTGCATTACT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFRSHF*YWSCIT
Trigger: AGTAATGCAACTCCAGTACCAGAAGTGGCTTCTAAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTGTGCATGTACACATaGGAACCATCAAAATTATTT +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLCMYT*EPSKLF
Trigger: AAATAATTTTGATGGTTCCCATGTGTACATGCACAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAAAGTACCTCTCAAATaGTATACGGTGTCAGTGATC +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAKVPLK*YTVSVI
Trigger: GATCACTGACACCGTATACCATTTGAGAGGTACTTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAAAGTATGGAAAGGAATaGTTCGGAAAAACCATTCAA +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKKYGKE*FGKTIQ
Trigger: TTGAATGGTTTTTCCGAACCATTCCTTTCCATACTT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAAGTATGGAAAGGAATaGTTCGGAAAAACCATTCAA +
Preference number: 4 (lower is better)
Translates to: LSFGKWITSFLESTQQREKYGKE*FGKTIQ
Trigger: TTGAATGGTTTTTCCGAACCATTCCTTTCCATACTT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTGTCCTTTGGAAAGTaGATAACCTCATTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLSFGK*ITSFLE
Trigger: CTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTAGAATCCTTCAGGTaGCCAAATGTGTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALESFR*PNVSRF
Trigger: AAATCTTGACACATTTGGTCACCTGAAGGATTCTAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAACCATAAATAGAACTTaGTGCTTTCACTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVATINRT*CFHFPG
Trigger: TCCTGGAAAGTGAAAGCATCAAGTTCTATTTATGGT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR TCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAGCAATATGCAATCTTaGCATCAAAGCATTAGCCAA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASNMQS*HQSISQ
Trigger: TTGGCTAATGCTTTGATGTCAAGATTGCATATTGCT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAAAGGTACTTTTCAGTaGCTGAAACTCAGTTCGATA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAKGTFQ*LKLSSI
Trigger: TATCGAACTGAGTTTCAGGCACTGAAAAGTACCTTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCCAACTCAGCAATATaGAATCTTGACATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASNSAI*NLDIKA
Trigger: TGCTTTGATGTCAAGATTGCATATTGCTGAGTTGGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACCTAACTTAACATTCTaGAGAAAATTCCTGATTCAG +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAPNLTF*RKFLIQ
Trigger: CTGAATCAGGAATTTTCTGCAGAATGTTAAGTTAGG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR GCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAGTTGTTATTGTTATTaGAGTTGCCAGACATTCCTT +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASCYCY*SCQTFL
Trigger: AAGGAATGTCTGGCAACTGCAATAACAATAACAACT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAATTTTCCTATTTGCTaGGATTTCTTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVANFPIC*DFFFFW
Trigger: CCAGAAGAAGAAGAAATCCCAGCAAATAGGAAAATT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CCA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAACCATTTTTGTAGCTTaGGACTGGGATATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVATIFVA*DWDILR
Trigger: TCTTAAAATATCCCAGTCCCAAGCTACAAAAATGGT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp GGCAGCCGATTCCCAAGCCCGGTTCGGGACGCAATCCCTCGGCCCTaGGGCAGGACCGGGAGAGCAGGTGACGCCAAGCGCTATGGTAGG +
Preference number: 5 (lower is better)
Translates to: GSRFPSPVRDAIPRP*GRTGRAGDAKRYGR
Trigger: CCTACCATAGCGCTTGGCGTCACCTGCTCTCCCGGTCCTGCCCCAGGGCCGAGGGATTGCGTCCCGAACCGGGCTTGGGAATCGGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS TCA 90 bp CGCTATGGTAGGAGGTCGCAGTCTAGCTTTGTGCCAAGAAGCACCTaGAGTCCTAACACATTGGCTGCAGCTCCCGGCGGCTGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: RYGRRSQSSFVPRST*SPNTLAAAPGGCQA
Trigger: CGCCTGGCAGCCGCCGGGAGCTGCAGCCAATGTGTTAGGACTTCAGGTGCTTCTTGGCACAAAGCTAGACTGCGACCTCCTACCATAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGCAACCTCGCTCACTaGTCCTGGTTTTTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGNLAH*SWFFPP
Trigger: GGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS GCA 90 bp CAGGTGACGCCAAGCGCTATGGTAGGAGGTCGCAGTCTAGCTTTGTaGCAAGAAGCACCTGAAGTCCTAACACATTGGCTGCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: QVTPSAMVGGRSLAL*QEAPEVLTHWLQLP
Trigger: CGGGAGCTGCAGCCAATGTGTTAGGACTTCAGGTGCTTCTTGGCACAAAGCTAGACTGCGACCTCCTACCATAGCGCTTGGCGTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCGCACTTGGAGGCCTaGCACTTCCACAAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPHLEA*HFHKMS
Trigger: GCTCATCTTGTGGAAGTGCAAGGCCTCCAAGTGCGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGAGTCCTCGGGTTCCTaGCTCTGCTGGATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGESSGS*LCWISS
Trigger: TGAAGAGATCCAGCAGAGCAAGGAACCCGAGGACTC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGGAGGTCTGAGCTGTaGAACATGGCTTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGWRSEL*NMAWVS
Trigger: GGACACCCAAGCCATGTTCAACAGCTCAGACCTCCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS CCA 90 bp AGCTCTCTCTGGCGCCTCTCCTGTTCCAGTGTCTGGCTTATCAACTaGGCAACCTCGCTCACTTGTCCTGGTTTTTCCCGCCCAATAACA +
Preference number: 5 (lower is better)
Translates to: SSLWRLSCSSVWLIN*ATSLTCPGFSRPIT
Trigger: TGTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGACACTGGAACAGGAGAGGCGCCAGAGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCAGTACTGCCTCTGTaGGACTTGGAACCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSVLPL*DLEPPH
Trigger: ATGGGGAGGTTCCAAGTCCAACAGAGGCAGTACTGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAGTCCTCGGGTTCCTaGCTCTGCTGGATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRESSGS*LCWISS
Trigger: TGAAGAGATCCAGCAGAGCAAGGAACCCGAGGACTC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGCTGTCGGGAGTCTGTaGATTAGATGTGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGAVGSL*IRCGVL
Trigger: GAGGACTCCACATCTAATCAACAGACTCCCGACAGC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTATTCTGCCATCCCGTaGAGCAGCACCACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGYSAIP*SSTTFC
Trigger: ACAGAAGGTGGTGCTGCTCAACGGGATGGCAGAATA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGATCTCTAATCCGCACTaGGAGGCCTTGCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGISNPH*EALHFH
Trigger: GTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGAT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGTGTGTCATGCTCTaGGGTGGGGTCACACTAGTT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGCVML*GGVTLV
Trigger: AACTAGTGTGACCCCACCCAAGAGCATGACACACCC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp CAGCTATGTGGTCAGACGAGAAGGGCACATTGCTATCCACCGGGGTaGGGGGTGGAACACCAGAATCTGATTCTGGAGAAGACGTTCTCA +
Preference number: 5 (lower is better)
Translates to: QLCGQTRRAHCYPPG*GVEHQNLILEKTFS
Trigger: TGAGAACGTCTTCTCCAGAATCAGATTCTGGTGTTCCACCCCTCACCCCGGTGGATAGCAATGTGCCCTTCTCGTCTGACCACATAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGACTGCAGCATTCTCGTaGGGTTCCATACCCATCTGC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRTAAFS*GSIPIC
Trigger: GCAGATGGGTATGGAACCCAACGAGAATGCTGCAGT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCTTTCCCCCTTGTTTaGGCAATGACTGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPFPLV*AMTAAF
Trigger: GAATGCTGCAGTCATTGCCAAAACAAGGGGGAAAGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCGAGTCTCAGTGAACTaGGAATATGAAGGGCCATCG +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGRVSVN*EYEGPS
Trigger: CGATGGCCCTTCATATTCCAAGTTCACTGAGACTCG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCAGTACTGCCTCTGTaGGACTTGGAACCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSVLPL*DLEPPH
Trigger: ATGGGGAGGTTCCAAGTCCAACAGAGGCAGTACTGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCAGTACTGCCTCTGTaGGACTTGGAACCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSVLPL*DLEPPH
Trigger: ATGGGGAGGTTCCAAGTCCAACAGAGGCAGTACTGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTATCAACACCTCGCTaGTTTGAAGGAGGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGVSTPR*FEGGQE
Trigger: TTCCTGGCCTCCTTCAAACAAGCGAGGTGTTGATAC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGAGTCCTCGGGTTCCTaGCTCTGCTGGATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVESSGS*LCWISS
Trigger: TGAAGAGATCCAGCAGAGCAAGGAACCCGAGGACTC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGCTGTCGGGAGTCTGTaGATTAGATGTGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSAVGSL*IRCGVL
Trigger: GAGGACTCCACATCTAATCAACAGACTCCCGACAGC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTTCAGGACCATCTTaGTCAATGCTGTCGGGAGTC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSSGPS*SMLSGV
Trigger: GACTCCCGACAGCATTGACAAAGATGGTCCTGAAGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTATTCTGCCATCCCGTaGAGCAGCACCACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRYSAIP*SSTTFC
Trigger: ACAGAAGGTGGTGCTGCTCAACGGGATGGCAGAATA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGGCAACCTCGCTCACTaGTCCTGGTTTTTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTGNLAH*SWFFPP
Trigger: GGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGGCCTGATACTGGCTTaGAGTCTCTTTGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGGLILA*SLFEML
Trigger: GAGCATCTCAAAGAGACTCAAAGCCAGTATCAGGCC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGATCTCTAATCCGCACTaGGAGGCCTTGCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRISNPH*EALHFH
Trigger: GTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGAT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGGCAAGATGTCTGCTaGCCATCCAAGTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGWQDVC*PSKFSM
Trigger: CATGGAGAACTTGGATGGCAAGCAGACATCTTGCCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGCTGTTGAACATGGCTaGGGTGTCCAGTTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGAVEHG*GVQFSS
Trigger: ACTGGAAAACTGGACACCCAAGCCATGTTCAACAGC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCCTTGAGTTTCTTTTaGACCACTGCTCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSLSFF*TTARSW
Trigger: CCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTTTCTGTCTGCAGCTaGGCCTCCTCACCACACATT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLSVCS*ASSPHI
Trigger: AATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTCAGCTGCCCAGTTTaGTCAGTAAGGTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFSCPV*SVRCSR
Trigger: CCTGCTACACCTTACTGACAAAACTGGGCAGCTGAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp GATGCTGTCATTCCAAGAGCCTCATCTGATGACAGTGCTAAGGACTaGGAGAGCCCTGGTGTTTTAGGTTCTGCTCCTAAGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: DAVIPRASSDDSAKD*ESPGVLGSAPKPLR
Trigger: CCTCAGCGGCTTAGGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCCTTAGCACTGTCATCAGATGAGGCTCTTGGAATGACAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424654.5
ENST00000456331.6
CDS CCA 90 bp AGTGTCTCCCCACATAGAGGAGAGAGGCCCCATTTCTGGGTCCAGTaGTTCTTCTTGAAATTCAGCTATGTGGTCAGACGAGAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: SVSPHRGERPHFWVQ*FFLKFSYVVRREGH
Trigger: GTGCCCTTCTCGTCTGACCACATAGCTGAATTTCAAGAAGAACCACTGGACCCAGAAATGGGGCCTCTCTCCTCTATGTGGGGAGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCACTGCAGCATTCTCGTaGGGTTCCATACCCATCTGC +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVTAAFS*GSIPIC
Trigger: GCAGATGGGTATGGAACCCAACGAGAATGCTGCAGT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCCTTTCCCCCTTGTTTaGGCAATGACTGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSPFPLV*AMTAAF
Trigger: GAATGCTGCAGTCATTGCCAAAACAAGGGGGAAAGG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCGAGTCTCAGTGAACTaGGAATATGAAGGGCCATCG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRRVSVN*EYEGPS
Trigger: CGATGGCCCTTCATATTCCAAGTTCACTGAGACTCG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAAATACTGCACTCAGTaGACTCACAGTTGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGKYCTQ*THSWGD
Trigger: GTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTATCAACACCTCGCTaGTTTGAAGGAGGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVSTPR*FEGGQE
Trigger: TTCCTGGCCTCCTTCAAACAAGCGAGGTGTTGATAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCTTCAGGACCATCTTaGTCAATGCTGTCGGGAGTC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSSGPS*SMLSGV
Trigger: GACTCCCGACAGCATTGACAAAGATGGTCCTGAAGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGCAACCTCGCTCACTaGTCCTGGTTTTTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGNLAH*SWFFPP
Trigger: GGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGGCCTGATACTGGCTTaGAGTCTCTTTGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSGLILA*SLFEML
Trigger: GAGCATCTCAAAGAGACTCAAAGCCAGTATCAGGCC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTTTTCCATTTTCTCTaGGGCCTTCCGAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFFHFL*GLPSLL
Trigger: GAGAAGGCTCGGAAGGCCCAAGAGAAAATGGAAAAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGCAGACATGTGCAATaGCCATTTCAGGATCCCACA +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCRHVQ*PFQDPT
Trigger: TGTGGGATCCTGAAATGGCAATTGCACATGTCTGCA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGAAGAGGAACTGTGTaGTGTTTGCCAGTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGRGTV*CLPVLL
Trigger: CAGCAACACTGGCAAACACAACACAGTTCCTCTTCC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGTGACAGTCCCATTTaGTGCCAGTTGAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGDSPI*CQLKAE
Trigger: CTCAGCTTTCAACTGGCACAAAATGGGACTGTCACC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGAAAATATGGATGTTTaGGCTGGGGGTGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSENMDV*AGGGGT
Trigger: TGTGCCACCACCCCCAGCCAAAACATCCATATTTTC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAAAATATGGATGTTTaGGCTGGGGGTGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRENMDV*AGGGGT
Trigger: TGTGCCACCACCCCCAGCCAAAACATCCATATTTTC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp ATGATGGCACTGGGAGAATCAGTGTTCTCAAATACTGCACTCAGTTaGCTCACAGTTGGGGAGACAGCCTCAGTTCGGGAGCTAAGGCTG +
Preference number: 5 (lower is better)
Translates to: MMALGESVFSNTALS*LTVGETASVRELRL
Trigger: CAGCCTTAGCTCCCGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACTGATTCTCCCAGTGCCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp GCGTCTGTTCTTCACAGAGAGCTGGGCTCGAGTTTTCAGTGCTTTTaGATCCAGGCGCTCTGTCTCTGGGACTGCTTCATTCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: ASVLHRELGSSFQCF*IQALCLWDCFIQVL
Trigger: CAAGACTTGAATGAAGCAGTCCCAGAGACAGAGCGCCTGGATTCAAAAGCACTGAAAACTCGAGCCCAGCTCTCTGTGAAGAACAGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp GACTGTCCATCATCAAGGATCTCATCTGATGACAGTGCTAAGGACTaGGAGAGCCCTGGTGTTTTAGGTTCTGCTCCTAAGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: DCPSSRISSDDSAKD*ESPGVLGSAPKPLR
Trigger: CCTCAGCGGCTTAGGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCCTTAGCACTGTCATCAGATGAGATCCTTGATGATGGACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289495.7
ENST00000433360.6
CDS GCA 90 bp TGTCCTCATTCTCAGGCAGCTCAAAGACTTCAATGGCCATGTCGCTaGCAGGAAGGACAGGTCCTACCTCATCTTCTTCTTCATCTGTGG +
Preference number: 5 (lower is better)
Translates to: CPHSQAAQRLQWPCR*QEGQVLPHLLLHLW
Trigger: CCACAGATGAAGAAGAAGATGAGGTAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTGAAGTCTTTGAGCTGCCTGAGAATGAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp GGGAGAATCAGTGTTCTCAAATACTGCACTCAGTTGACTCACAGTTaGGGAGACAGCCTCAGTTCGGGAGCTAAGGCTGTCCAAGGAATC +
Preference number: 5 (lower is better)
Translates to: GRISVLKYCTQLTHS*GDSLSSGAKAVQGI
Trigger: GATTCCTTGGACAGCCTTAGCTCCCGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACTGATTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTGTTCCCCATCTGACTaGGGTTTGTCAAAGGTACTT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGCSPSD*GLSKVL
Trigger: AAGTACCTTTGACAAACCCAAGTCAGATGGGGAACA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAAATACTGCACTCAGTaGACTCACAGTTGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSKYCTQ*THSWGD
Trigger: GTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTTCTGGTACTGGAGTaGCATTACTCTTGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLLVLE*HYSCEH
Trigger: ATGCTCACAAGAGTAATGCAACTCCAGTACCAGAAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCCACAATCTGGTCATaGACTTGTATTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSTIWS*TCILPS
Trigger: GGATGGCAGAATACAAGTCAATGACCAGATTGTGGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGGCCTGATACTGGCTTaGAGTCTCTTTGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVGLILA*SLFEML
Trigger: GAGCATCTCAAAGAGACTCAAAGCCAGTATCAGGCC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCCGCACTTGGAGGCCTaGCACTTCCACAAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHPHLEA*HFHKMS
Trigger: GCTCATCTTGTGGAAGTGCAAGGCCTCCAAGTGCGG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGATGCCCTTAGTGATTaGGGATCTTTGGCATCATCT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGDALSD*GSLASS
Trigger: AGATGATGCCAAAGATCCCAAATCACTAAGGGCATC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTCCACTTCTTTCCCTaGCTGGAATTCCTTCGCAAA +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFHFFP*LEFLRK
Trigger: TTTGCGAAGGAATTCCAGCAAGGGAAAGAAGTGGAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTGGAGGTCTGAGCTGTaGAACATGGCTTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTWRSEL*NMAWVS
Trigger: GGACACCCAAGCCATGTTCAACAGCTCAGACCTCCA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCCTTGAGTTTCTTTTaGACCACTGCTCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSLSFF*TTARSW
Trigger: CCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTTTCCATTTTCTCTaGGGCCTTCCGAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFFHFL*GLPSLL
Trigger: GAGAAGGCTCGGAAGGCCCAAGAGAAAATGGAAAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGGGTGTGTCATGCTCTaGGGTGGGGTCACACTAGTT +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTGCVML*GGVTLV
Trigger: AACTAGTGTGACCCCACCCAAGAGCATGACACACCC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTGCAGACATGTGCAATaGCCATTTCAGGATCCCACA +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRCRHVQ*PFQDPT
Trigger: TGTGGGATCCTGAAATGGCAATTGCACATGTCTGCA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTCCTTCTCCACTCTaGAGGATCTGGAATCAGGTC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFPSPL*RIWNQV
Trigger: GACCTGATTCCAGATCCTCAAGAGTGGAGAAGGAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp CAAGGTTCTTCAGGACCATCTTTGTCAATGCTGTCGGGAGTCTGTTaGTTAGATGTGGAGTCCTCGGGTTCCTTGCTCTGCTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: QGSSGPSLSMLSGVC*LDVESSGSLLCWIS
Trigger: AGAGATCCAGCAGAGCAAGGAACCCGAGGACTCCACATCTAATCAACAGACTCCCGACAGCATTGACAAAGATGGTCCTGAAGAACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp CACATAGAGGAGAGAGGCCCCATTTCTGGGTCCAGTGGTTCTTCTTaGAATTCAGCTATGTGGTCAGACGAGAAGGGCACATTGCTATCC +
Preference number: 5 (lower is better)
Translates to: HIEERGPISGSSGSS*NSAMWSDEKGTLLS
Trigger: GGATAGCAATGTGCCCTTCTCGTCTGACCACATAGCTGAATTTCAAGAAGAACCACTGGACCCAGAAATGGGGCCTCTCTCCTCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS TCA 90 bp TCATTAAACCATGAGAAAGGCATGCAAGGGGAACGAGTGGAGGTCTaGGCTGTTGAACATGGCTTGGGTGTCCAGTTTTCCAGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: SLNHEKGMQGERVEV*AVEHGLGVQFSSLP
Trigger: AGGCAGACTGGAAAACTGGACACCCAAGCCATGTTCAACAGCTCAGACCTCCACTCGTTCCCCTTGCATGCCTTTCTCATGGTTTAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS TCA 90 bp TCATCTATCATATCCAGGCTCTCATCTGATGACAGTGCTAAGGACTaGGAGAGCCCTGGTGTTTTAGGTTCTGCTCCTAAGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSIISRLSSDDSAKD*ESPGVLGSAPKPLR
Trigger: CCTCAGCGGCTTAGGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCCTTAGCACTGTCATCAGATGAGAGCCTGGATATGATAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340694.8
ENST00000433881.5
CDS CCA 90 bp TTCCAGTGTCTGGCTTATCAACTGGGCAACCTCGCTCACTTGTCCTaGTTTTTCCCGCCCAATAACAAATCTGACGTTGCCCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: FQCLAYQLGNLAHLS*FFPPNNKSDVALGV
Trigger: AACACCAAGGGCAACGTCAGATTTGTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGACACTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp ATGGGGAAAACATGTCCTCATTCTCAGGCAGCTCAAAGACTTCAATaGCCATGTCGCTGCCAGGAAGGACAGGTCCTACCTCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: MGKTCPHSQAAQRLQ*PCRCQEGQVLPHLL
Trigger: AAGAAGATGAGGTAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTGAAGTCTTTGAGCTGCCTGAGAATGAGGACATGTTTTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp GCACACTCCATTCCTGAACGGCCCGATTCTGACACTGACTGTGTTTaGGAGACTGTCCATCATCAAGGATCTCATCTGATGACAGTGCTA +
Preference number: 5 (lower is better)
Translates to: AHSIPERPDSDTDCV*ETVHHQGSHLMTVL
Trigger: TAGCACTGTCATCAGATGAGATCCTTGATGATGGACAGTCTCCCAAACACAGTCAGTGTCAGAATCGGGCCGTTCAGGAATGGAGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289495.7
ENST00000433360.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCCATCTGACTTGGGTTaGTCAAAGGTACTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGPSDLG*SKVLFS
Trigger: ACTGAAAAGTACCTTTGACAAACCCAAGTCAGATGG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTAATTCTGTTGACATaGGAGCCATATTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLILLT*EPYFLP
Trigger: GGGGAGGAAATATGGCTCCAATGTCAACAGAATTAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCAGTACTGCCTCTGTaGGACTTGGAACCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSVLPL*DLEPPH
Trigger: ATGGGGAGGTTCCAAGTCCAACAGAGGCAGTACTGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTTCTGGTACTGGAGTaGCATTACTCTTGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLLVLE*HYSCEH
Trigger: ATGCTCACAAGAGTAATGCAACTCCAGTACCAGAAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTTCTGGTACTGGAGTaGCATTACTCTTGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLLVLE*HYSCEH
Trigger: ATGCTCACAAGAGTAATGCAACTCCAGTACCAGAAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTCGGACTTTGGCATaGCCTTACTTTCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFRTLA*PYFQHK
Trigger: CTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAAGGGATTTCGGACTTaGGCATTGCCTTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRKGFRT*ALPYFQ
Trigger: CTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCTT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAAGGGATTTCGGACTTaGGCATTGCCTTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSKGFRT*ALPYFQ
Trigger: CTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCTT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAATCTGGTCATTGACTaGTATTCTGCCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRNLVID*YSAIPL
Trigger: CAACGGGATGGCAGAATACAAGTCAATGACCAGATT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAATCTGACGTTGCCCTaGGTGTTTCTGAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRNLTLP*VFLRTV
Trigger: AACAGTTCTCAGAAACACCAAGGGCAACGTCAGATT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGATAACAAATCTGACGTaGCCCTTGGTGTTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGITNLT*PLVFLR
Trigger: TCTCAGAAACACCAAGGGCAACGTCAGATTTGTTAT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCATCTCTAATCCGCACTaGGAGGCCTTGCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTISNPH*EALHFH
Trigger: GTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGAT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCCAGTGGTTCTTCTaGAAATTCAGCTATGTGGTC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRVQWFF*KFSYVV
Trigger: GACCACATAGCTGAATTTCAAGAAGAACCACTGGAC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGTCCAGTGGTTCTTCTaGAAATTCAGCTATGTGGTC +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSVQWFF*KFSYVV
Trigger: GACCACATAGCTGAATTTCAAGAAGAACCACTGGAC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTTCTTGTTGGTGGTTaGGTGATGGCAAGGAGATTC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRFLVGG*VMARRF
Trigger: GAATCTCCTTGCCATCACCAAACCACCAACAAGAAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTTCTTGTTGGTGGTTaGGTGATGGCAAGGAGATTC +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSFLVGG*VMARRF
Trigger: GAATCTCCTTGCCATCACCAAACCACCAACAAGAAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGATGCCCTTAGTGATTaGGGATCTTTGGCATCATCT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRDALSD*GSLASS
Trigger: AGATGATGCCAAAGATCCCAAATCACTAAGGGCATC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTCTCCAGTGATGTTTaGGGCACTGAATTCAGATAC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFSSDV*GTEFRY
Trigger: GTATCTGAATTCAGTGCCCAAAACATCACTGGAGAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTTTTTCCATTTTCTCTaGGGCCTTCCGAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVFFHFL*GLPSLL
Trigger: GAGAAGGCTCGGAAGGCCCAAGAGAAAATGGAAAAA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTGCAGACATGTGCAATaGCCATTTCAGGATCCCACA +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVCRHVQ*PFQDPT
Trigger: TGTGGGATCCTGAAATGGCAATTGCACATGTCTGCA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGCAGAATGACTTGCTaGCCTTTTCCCTTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSRMTC*PFPLVG
Trigger: ACCTACTAAGGGAAAAGGCAAGCAAGTCATTCTGCT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCCTCATTTTCCCTCTaGCCACTTTGTTTCCAACAA +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSSFSL*PLCFQQ
Trigger: TTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGGTCGCAGTCTAGCTTaGTGCCAAGAAGCACCTGAA +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTGRSLA*CQEAPE
Trigger: TTCAGGTGCTTCTTGGCACAAAGCTAGACTGCGACC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS GCA 90 bp CTTCTCAGAAATGATGGCACTGGGAGAATCAGTGTTCTCAAATACTaGACTCAGTTGACTCACAGTTGGGGAGACAGCCTCAGTTCGGGA +
Preference number: 5 (lower is better)
Translates to: LLRNDGTGRISVLKY*TQLTHSWGDSLSSG
Trigger: TCCCGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACTGATTCTCCCAGTGCCATCATTTCTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS GCA 90 bp AAAGGCGCCCCCAGATCCACAAACTTCCGCTTAATTTTTCCTCCTTaGACCGCCAATGAACTGGATGCCCTTAGTGATTTGGGATCTTTG +
Preference number: 5 (lower is better)
Translates to: KGAPRSTNFRLIFPP*TANELDALSDLGSL
Trigger: CAAAGATCCCAAATCACTAAGGGCATCCAGTTCATTGGCGGTGCAAGGAGGAAAAATTAAGCGGAAGTTTGTGGATCTGGGGGCGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS CCA 90 bp TCTGTGGAACTAACACTATCATACAGTCTTGTCCTAGAGGGTCTCTaGCGTCTGTTCTTCACAGAGAGCTGGGCTCGAGTTTTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SVELTLSYSLVLEGL*RLFFTESWARVFSA
Trigger: AGCACTGAAAACTCGAGCCCAGCTCTCTGTGAAGAACAGACGCCAGAGACCCTCTAGGACAAGACTGTATGATAGTGTTAGTTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp GCACACTCCATTCCTGAACGGCCCGATTCTGACACTGACTGTGTTTaGGAGACTGTCCATCATCAAGGATCTCGTCATCTATCATATCCA +
Preference number: 5 (lower is better)
Translates to: AHSIPERPDSDTDCV*ETVHHQGSRHLSYP
Trigger: TGGATATGATAGATGACGAGATCCTTGATGATGGACAGTCTCCCAAACACAGTCAGTGTCAGAATCGGGCCGTTCAGGAATGGAGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340694.8
ENST00000433881.5
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCCATCTGACTTGGGTTaGTCAAAGGTACTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRPSDLG*SKVLFS
Trigger: ACTGAAAAGTACCTTTGACAAACCCAAGTCAGATGG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTTAATTCTGTTGACATaGGAGCCATATTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLILLT*EPYFLP
Trigger: GGGGAGGAAATATGGCTCCAATGTCAACAGAATTAA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCGAGTCTCAGTGAACTaGGAATATGAAGGGCCATCG +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTRVSVN*EYEGPS
Trigger: CGATGGCCCTTCATATTCCAAGTTCACTGAGACTCG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGCTGTCGGGAGTCTGTaGATTAGATGTGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHAVGSL*IRCGVL
Trigger: GAGGACTCCACATCTAATCAACAGACTCCCGACAGC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCATAACAAATCTGACGTaGCCCTTGGTGTTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSITNLT*PLVFLR
Trigger: TCTCAGAAACACCAAGGGCAACGTCAGATTTGTTAT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGGCCTGATACTGGCTTaGAGTCTCTTTGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTGLILA*SLFEML
Trigger: GAGCATCTCAAAGAGACTCAAAGCCAGTATCAGGCC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCCTTGAGTTTCTTTTaGACCACTGCTCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSLSFF*TTARSW
Trigger: CCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCAAGACATTGGAGCCTaGATTAGGTATCATGCACTA +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRQDIGA*IRYHAL
Trigger: TAGTGCATGATACCTAATCAAGGCTCCAATGTCTTG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCCTCATTTTCCCTCTaGCCACTTTGTTTCCAACAA +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSSFSL*PLCFQQ
Trigger: TTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGACCATTTTTGTAGCTaGGGACTGGGATATTTTAAG +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGDHFCS*GLGYFK
Trigger: CTTAAAATATCCCAGTCCCAAGCTACAAAAATGGTC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGACACTGGATCTCCTCTaGAAGTTTAGTCTGCATAAC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRTLDLL*KFSLHN
Trigger: GTTATGCAGACTAAACTTCAAGAGGAGATCCAGTGT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCACGGCATGCACATTGTaGAGAAGTTATCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSTACTL*RSYLFS
Trigger: AGAGAACAGATAACTTCTCAACAATGTGCATGCCGT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCAAACGGCATGCACATaGTTGAGAAGTTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRQTACT*LRSYLF
Trigger: GAACAGATAACTTCTCAACAATGTGCATGCCGTTTG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCCACTTGTGTTGTTTTaGGCAACAACCAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRPLVLF*ATTKMP
Trigger: TGGCATTTTGGTTGTTGCCAAAAACAACACAAGTGG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGCTAAATTTCATGTTGTaGGGAGGTGTTATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRLNFML*GGVIWL
Trigger: CAGCCAGATAACACCTCCCAACAACATGAAATTTAG...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTCAGCTGCCCAGTTTaGTCAGTAAGGTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFSCPV*SVRCSR
Trigger: CCTGCTACACCTTACTGACAAAACTGGGCAGCTGAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp CAGGTACTTCTTTTCCACAACTGGATGCAGAAGCATCAGGAGAGGTaGAATCACCACCTGCAAGTTCTTTCCTCTGTTGCTTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: QVLLFHNWMQKHQER*NHHLQVLSSVALLP
Trigger: AGGCAGCAAAGCAACAGAGGAAAGAACTTGCAGGTGGTGATTTCACCTCTCCTGATGCTTCTGCATCCAGTTGTGGAAAAGAAGTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp GTAAGAGGGTATGTGTTACTGCTCACCAGCACCCTCGGCTGTAGTTaGCGTCATCTTTTCTGTCTTTTTGGACTTCCTCTGCATTTGCTC +
Preference number: 5 (lower is better)
Translates to: VRGYVLLLTSTLGCS*RHLFCLFGLPLHLL
Trigger: GAGCAAATGCAGAGGAAGTCCAAAAAGACAGAAAAGATGACGTCAACTACAGCCGAGGGTGCTGGTGAGCAGTAACACATACCCTCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCCATCTGACTTGGGTTaGTCAAAGGTACTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVPSDLG*SKVLFS
Trigger: ACTGAAAAGTACCTTTGACAAACCCAAGTCAGATGG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGTATCAACACCTCGCTaGTTTGAAGGAGGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHVSTPR*FEGGQE
Trigger: TTCCTGGCCTCCTTCAAACAAGCGAGGTGTTGATAC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCATTGGAGTATGTGTaGAAAACCTTAATAGGAGCA +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSLEYV*KTLIGA
Trigger: TGCTCCTATTAAGGTTTTCAACACATACTCCAATGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCATAACAAATCTGACGTaGCCCTTGGTGTTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVITNLT*PLVFLR
Trigger: TCTCAGAAACACCAAGGGCAACGTCAGATTTGTTAT...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGAACTGCATGTTTGATTaGCAACTCTTTGAACTTGTG +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGNCMFD*QLFELV
Trigger: CACAAGTTCAAAGAGTTGCAAATCAAACATGCAGTT...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTGTAACTGCATGTTaGATTTGCAACTCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSVTAC*ICNSLN
Trigger: GTTCAAAGAGTTGCAAATCAAACATGCAGTTACAGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGCTTGGTCTTCAATTTTaGAATCTCTGCTTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGLGLQF*NLCFCN
Trigger: GTTACAGAAGCAGAGATTCAAAAATTGAAGACCAAG...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTCTGCTTCCTGTCTTTaGATGAAATCAAGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGSASCL*MKSSSF
Trigger: AAAAGAGCTTGATTTCATCAAAAGACAGGAAGCAGA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAGTGATTTGGGATCTTaGGCATCATCTTTTTCTCGT +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSDLGS*ASSFSR
Trigger: ACGAGAAAAAGATGATGCCAAAGATCCCAAATCACT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289495.7
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCAGTGATTTGGGATCTTaGGCATCATCTTTTTCTCGT +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSDLGS*ASSFSR
Trigger: ACGAGAAAAAGATGATGCCAAAGATCCCAAATCACT...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGACATCTTCATTTCCTaGAGTTTCTTTTTGACCACT +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGDIFIS*SFFLTT
Trigger: AGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTC...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCCCACCTGGGAAATCTaGAGTAGAAAATATGTGATG +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVPTWEI*SRKYVM
Trigger: CATCACATATTTTCTACTCAAGATTTCCCAGGTGGG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGTTTACATCTTATGCTTaGTGGGGCAATCAAACCAAA +
Preference number: 5 (lower is better)
Translates to: GQEEVGTSLGASPSSVRGFTSYA*WGNQTK
Trigger: TTTGGTTTGATTGCCCCACAAAGCATAAGATGTAAA...CCCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGACCATTTTTGTAGCTaGGGACTGGGATATTTTAAG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRDHFCS*GLGYFK
Trigger: CTTAAAATATCCCAGTCCCAAGCTACAAAAATGGTC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTTCCTTCTCCACTCTaGAGGATCTGGAATCAGGTC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFPSPL*RIWNQV
Trigger: GACCTGATTCCAGATCCTCAAGAGTGGAGAAGGAAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCCAAACGGCATGCACATaGTTGAGAAGTTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVQTACT*LRSYLF
Trigger: GAACAGATAACTTCTCAACAATGTGCATGCCGTTTG...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAGACTAGAGGTTCATTaGAGAGGCAGCCGATTCCCA +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHRLEVH*RGSRFP
Trigger: TGGGAATCGGCTGCCTCTCAAATGAACCTCTAGTCT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS TCA 90 bp ACTATCTTCCTCCTCATCCTGCTCAGTGCCTGTCTCTCCCCAGTCTaGATTATACCTGGATCTCACCCTATACACATTATAGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: TIFLLILLSACLSPV*IIPGSHPIHIIVTV
Trigger: CACAGTGACTATAATGTGTATAGGGTGAGATCCAGGTATAATTCAGACTGGGGAGAGACAGGCACTGAGCAGGATGAGGAGGAAGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp GCTGCCTCCCTTCCAACCAAATTAGCTTCAGCATCTTCTAACAGTTaGCTTTGTGGTGAAGGGATTTCGGACTTTGGCATTGCCTTACTT +
Preference number: 5 (lower is better)
Translates to: AASLPTKLASASSNS*LCGEGISDFGIALL
Trigger: AAGTAAGGCAATGCCAAAGTCCGAAATCCCTTCACCACAAAGCCAACTGTTAGAAGATGCTGAAGCTAATTTGGTTGGAAGGGAGGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp CCTCATCCTGCTCAGTGCCTGTCTCTCCCCAGTCTGAATTATACCTaGATCTCACCCTATACACATTATAGTCACTGTGCATGTACACAT +
Preference number: 5 (lower is better)
Translates to: PHPAQCLSLPSLNYT*ISPYTHYSHCACTH
Trigger: ATGTGTACATGCACAGTGACTATAATGTGTATAGGGTGAGATCCAGGTATAATTCAGACTGGGGAGAGACAGGCACTGAGCAGGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp GACATCTTCATTTCCTTGAGTTTCTTTTTGACCACTGCTCGGTCCTaGGATGCTGTCATTCCAAGAGCCTCATCTGATGACAGTGCTAAG +
Preference number: 5 (lower is better)
Translates to: DIFISLSFFLTTARS*DAVIPRASSDDSAK
Trigger: CTTAGCACTGTCATCAGATGAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424654.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTACTGCAGCATTCTCGTaGGGTTCCATACCCATCTGC +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGTAAFS*GSIPIC
Trigger: GCAGATGGGTATGGAACCCAACGAGAATGCTGCAGT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTTCGGACTTTGGCATaGCCTTACTTTCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFRTLA*PYFQHK
Trigger: CTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCATTGGAGTATGTGTaGAAAACCTTAATAGGAGCA +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSLEYV*KTLIGA
Trigger: TGCTCCTATTAAGGTTTTCAACACATACTCCAATGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTATTCTGCCATCCCGTaGAGCAGCACCACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGYSAIP*SSTTFC
Trigger: ACAGAAGGTGGTGCTGCTCAACGGGATGGCAGAATA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAATCTGGTCATTGACTaGTATTCTGCCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTNLVID*YSAIPL
Trigger: CAACGGGATGGCAGAATACAAGTCAATGACCAGATT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCCACAATCTGGTCATaGACTTGTATTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSTIWS*TCILPS
Trigger: GGATGGCAGAATACAAGTCAATGACCAGATTGTGGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGAACTGCATGTTTGATTaGCAACTCTTTGAACTTGTG +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRNCMFD*QLFELV
Trigger: CACAAGTTCAAAGAGTTGCAAATCAAACATGCAGTT...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGTCTGTAACTGCATGTTaGATTTGCAACTCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRSVTAC*ICNSLN
Trigger: GTTCAAAGAGTTGCAAATCAAACATGCAGTTACAGA...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCCTTGGTCTTCAATTTTaGAATCTCTGCTTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSLGLQF*NLCFCN
Trigger: GTTACAGAAGCAGAGATTCAAAAATTGAAGACCAAG...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTCTGCTTCCTGTCTTTaGATGAAATCAAGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSSASCL*MKSSSF
Trigger: AAAAGAGCTTGATTTCATCAAAAGACAGGAAGCAGA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACCGCACTTGGAGGCCTaGCACTTCCACAAGATGAGC +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKPHLEA*HFHKMS
Trigger: GCTCATCTTGTGGAAGTGCAAGGCCTCCAAGTGCGG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGTCCAGTGGTTCTTCTaGAAATTCAGCTATGTGGTC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTVQWFF*KFSYVV
Trigger: GACCACATAGCTGAATTTCAAGAAGAACCACTGGAC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTCCACTTCTTTCCCTaGCTGGAATTCCTTCGCAAA +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFHFFP*LEFLRK
Trigger: TTTGCGAAGGAATTCCAGCAAGGGAAAGAAGTGGAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCGACATCTTCATTTCCTaGAGTTTCTTTTTGACCACT +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSDIFIS*SFFLTT
Trigger: AGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTC...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AGGGCAGGAAGAGGTGGGGACTTCTCTTGGAGCATCTCCATCATCTGTAAGAGGGGACTGAAGTCATCATaGAAGGTAAAATTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: RAGRGGDFSWSISIICKRGLKSS*KVKFFL
Trigger: GAGAAAGAATTTTACCTTCAATGATGACTTCAGTCC...CCTCTTACAGATGATGGAGATGCTCCAAGAGAAGTCCCCACCTCTTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340694.8
ENST00000433881.5
CDS-3UTR CAA 90 bp GCTCATACAATGCTTTCTGTCTGCAGCTTGGCCTCCTCACCACACATTCCCTCCTTTACATCTTATGCTTaGTGGGGCAATCAAACCAAA +
Preference number: 5 (lower is better)
Translates to: AHTMLSVCSLASSPHIPSFTSYA*WGNQTK
Trigger: TTTGGTTTGATTGCCCCACAAAGCATAAGATGTAAA...GGAGGGAATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAGCATTGTATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTTTCTGTCTGCAGCTaGGCCTCCTCACCACACATT +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLSVCS*ASSPHI
Trigger: AATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTTCCCTCTTGCCACTTaGTTTCCAACAACAATGGAG +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTFPLAT*FPTTME
Trigger: CTCCATTGTTGTTGGAAACAAAGTGGCAAGAGGGAA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGACCATTTTTGTAGCTaGGGACTGGGATATTTTAAG +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVDHFCS*GLGYFK
Trigger: CTTAAAATATCCCAGTCCCAAGCTACAAAAATGGTC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTTCCTTCTCCACTCTaGAGGATCTGGAATCAGGTC +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHFPSPL*RIWNQV
Trigger: GACCTGATTCCAGATCCTCAAGAGTGGAGAAGGAAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCGGTTATAGAAACTGTTaGATGGCTTTCTCTCTAGAC +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVGYRNC*MAFSLD
Trigger: GTCTAGAGAGAAAGCCATCAAACAGTTTCTATAACC...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS TCA 90 bp TGCATTACTCTTGTGAGCATCCTCTGTATCAACACCTCGCTTGTTTaGAGGAGGCCAGGAATTAGAATCCTTCAGGTGACCAAATGTGTC +
Preference number: 5 (lower is better)
Translates to: CITLVSILCINTSLV*RRPGIRILQVTKCV
Trigger: GACACATTTGGTCACCTGAAGGATTCTAATTCCTGGCCTCCTTCAAACAAGCGAGGTGTTGATACAGAGGATGCTCACAAGAGTAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp TTGCAACTCTTTGAACTTGTGACTGAGCTTGCTTGTGTCCAGTTCTaGTGGGGAAAACATGTCCTCATTCTCAGGCAGCTCAAAGACTTC +
Preference number: 5 (lower is better)
Translates to: LQLFELVTELACVQF*WGKHVLILRQLKDF
Trigger: GAAGTCTTTGAGCTGCCTGAGAATGAGGACATGTTTTCCCCATCAGAACTGGACACAAGCAAGCTCAGTCACAAGTTCAAAGAGTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp GAGGTTCATCTTGACCTTAAGATCTCACTGCCAAAGAGAAAGGGATaGGGAGGTCTTCTACCTTTCCTGTCTAGGGAGAGTTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: EVHLDLKISLPKRKG*GGLLPFLSRESFSA
Trigger: AGCTGAAAAACTCTCCCTAGACAGGAAAGGTAGAAGACCTCCTCATCCCTTTCTCTTTGGCAGTGAGATCTTAAGGTCAAGATGAACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413325.1
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCCTTTCCCCCTTGTTTaGGCAATGACTGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGPFPLV*AMTAAF
Trigger: GAATGCTGCAGTCATTGCCAAAACAAGGGGGAAAGG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGTATCAACACCTCGCTaGTTTGAAGGAGGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGVSTPR*FEGGQE
Trigger: TTCCTGGCCTCCTTCAAACAAGCGAGGTGTTGATAC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGAGTCCTCGGGTTCCTaGCTCTGCTGGATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREESSGS*LCWISS
Trigger: TGAAGAGATCCAGCAGAGCAAGGAACCCGAGGACTC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCTTCAGGACCATCTTaGTCAATGCTGTCGGGAGTC +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSSGPS*SMLSGV
Trigger: GACTCCCGACAGCATTGACAAAGATGGTCCTGAAGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTTCGGACTTTGGCATaGCCTTACTTTCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHFRTLA*PYFQHK
Trigger: CTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAATCTGACGTTGCCCTaGGTGTTTCTGAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHNLTLP*VFLRTV
Trigger: AACAGTTCTCAGAAACACCAAGGGCAACGTCAGATT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGGCAACCTCGCTCACTaGTCCTGGTTTTTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAGNLAH*SWFFPP
Trigger: GGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CAGGATCCCACACTGAAAATTCACGGCGCTCCATTAACAACACCAGGGTGTGTCTCTGTAACTGCATGTTaGATTTGCAACTCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: QDPTLKIHGAPLTTPGCVSVTAC*ICNSLN
Trigger: GTTCAAAGAGTTGCAAATCAAACATGCAGTTACAGA...GACACACCCTGGTGTTGTTAATGGAGCGCCGTGAATTTTCAGTGTGGGATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTGGCAAGATGTCTGCTaGCCATCCAAGTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGWQDVC*PSKFSM
Trigger: CATGGAGAACTTGGATGGCAAGCAGACATCTTGCCA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATGGAGGTCTGAGCTGTaGAACATGGCTTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREWRSEL*NMAWVS
Trigger: GGACACCCAAGCCATGTTCAACAGCTCAGACCTCCA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAGGGTGTGTCATGCTCTaGGGTGGGGTCACACTAGTT +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKGCVML*GGVTLV
Trigger: AACTAGTGTGACCCCACCCAAGAGCATGACACACCC...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCAAGACATTGGAGCCTaGATTAGGTATCATGCACTA +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTQDIGA*IRYHAL
Trigger: TAGTGCATGATACCTAATCAAGGCTCCAATGTCTTG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGGTGACAGTCCCATTTaGTGCCAGTTGAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGGDSPI*CQLKAE
Trigger: CTCAGCTTTCAACTGGCACAAAATGGGACTGTCACC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCACACTGGATCTCCTCTaGAAGTTTAGTCTGCATAAC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTTLDLL*KFSLHN
Trigger: GTTATGCAGACTAAACTTCAAGAGGAGATCCAGTGT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCCAAACGGCATGCACATaGTTGAGAAGTTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTQTACT*LRSYLF
Trigger: GAACAGATAACTTCTCAACAATGTGCATGCCGTTTG...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCTCCCAACCACTTGTGTaGTTTTTGGCAACAACCAAA +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTSQPLV*FLATTK
Trigger: TTTGGTTGTTGCCAAAAACAACACAAGTGGTTGGGA...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp CCTGAAACTCAGTTCGATATGCATTCCTGTGAGGAGAGGCACTTCTaGGAGTGGTTCGTTCACCTGAAGACTCAGTTTTCAACATTTTCA +
Preference number: 5 (lower is better)
Translates to: PETQFDMHSCEERHF*EWFVHLKTQFSTFS
Trigger: TGAAAATGTTGAAAACTGAGTCTTCAGGTGAACGAACCACTCTCAGAAGTGCCTCTCCTCACAGGAATGCATATCGAACTGAGTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000413325.1
ENST00000422324.1
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTAAATACTGCACTCAGTaGACTCACAGTTGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGKYCTQ*THSWGD
Trigger: GTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGCTGTCGGGAGTCTGTaGATTAGATGTGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREAVGSL*IRCGVL
Trigger: GAGGACTCCACATCTAATCAACAGACTCCCGACAGC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATATTCTGCCATCCCGTaGAGCAGCACCACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREYSAIP*SSTTFC
Trigger: ACAGAAGGTGGTGCTGCTCAACGGGATGGCAGAATA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACCGCACTTGGAGGCCTaGCACTTCCACAAGATGAGC +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAPHLEA*HFHKMS
Trigger: GCTCATCTTGTGGAAGTGCAAGGCCTCCAAGTGCGG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAATCTCTAATCCGCACTaGGAGGCCTTGCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKISNPH*EALHFH
Trigger: GTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGAT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAATCTCTAATCCGCACTaGGAGGCCTTGCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREISNPH*EALHFH
Trigger: GTGGAAGTGCAAGGCCTCCAAGTGCGGATTAGAGAT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCCCACCTGGGAAATCTaGAGTAGAAAATATGTGATG +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHPTWEI*SRKYVM
Trigger: CATCACATATTTTCTACTCAAGATTTCCCAGGTGGG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACTTTCTGTCTGCAGCTaGGCCTCCTCACCACACATT +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQRELSVCS*ASSPHI
Trigger: AATGTGTGGTGAGGAGGCCAAGCTGCAGACAGAAAG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCGACCATTTTTGTAGCTaGGGACTGGGATATTTTAAG +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTDHFCS*GLGYFK
Trigger: CTTAAAATATCCCAGTCCCAAGCTACAAAAATGGTC...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATACACTGGATCTCCTCTaGAAGTTTAGTCTGCATAAC +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHTLDLL*KFSLHN
Trigger: GTTATGCAGACTAAACTTCAAGAGGAGATCCAGTGT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATACGGCATGCACATTGTaGAGAAGTTATCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHTACTL*RSYLFS
Trigger: AGAGAACAGATAACTTCTCAACAATGTGCATGCCGT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATCCACTTGTGTTGTTTTaGGCAACAACCAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHPLVLF*ATTKMP
Trigger: TGGCATTTTGGTTGTTGCCAAAAACAACACAAGTGG...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTCCCAACCACTTGTGTaGTTTTTGGCAACAACCAAA +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSQPLV*FLATTK
Trigger: TTTGGTTGTTGCCAAAAACAACACAAGTGGTTGGGA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp TGTTGTATTTCTTTTCCAAGGCCTGATACTGGCTTTGAGTCTCTTTaGGATGCTCATTCACTGTGTGGCATAATGTTTGGGCCTCAATCC +
Preference number: 5 (lower is better)
Translates to: CCISFPRPDTGFESL*DAHSLCGIMFGPQS
Trigger: GGATTGAGGCCCAAACATTATGCCACACAGTGAATGAGCATCTCAAAGAGACTCAAAGCCAGTATCAGGCCTTGGAAAAGAAATACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 90 bp GACATCTTCATTTCCTTGAGTTTCTTTTTGACCACTGCTCGGTCCTaGGATGCTGTCATTCCAAGAGCCTTAAGTTTATTTCCATCCAAC +
Preference number: 5 (lower is better)
Translates to: DIFISLSFFLTTARS*DAVIPRALSLFPSN
Trigger: GTTGGATGGAAATAAACTTAAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAACCTTTCCCCCTTGTTTaGGCAATGACTGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREPFPLV*AMTAAF
Trigger: GAATGCTGCAGTCATTGCCAAAACAAGGGGGAAAGG...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACCTTTCCCCCTTGTTTaGGCAATGACTGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKPFPLV*AMTAAF
Trigger: GAATGCTGCAGTCATTGCCAAAACAAGGGGGAAAGG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACGAGTCTCAGTGAACTaGGAATATGAAGGGCCATCG +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKRVSVN*EYEGPS
Trigger: CGATGGCCCTTCATATTCCAAGTTCACTGAGACTCG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGAGTCCTCGGGTTCCTaGCTCTGCTGGATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAESSGS*LCWISS
Trigger: TGAAGAGATCCAGCAGAGCAAGGAACCCGAGGACTC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATCTTCAGGACCATCTTaGTCAATGCTGTCGGGAGTC +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQRESSGPS*SMLSGV
Trigger: GACTCCCGACAGCATTGACAAAGATGGTCCTGAAGA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCTTCAGGACCATCTTaGTCAATGCTGTCGGGAGTC +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSSGPS*SMLSGV
Trigger: GACTCCCGACAGCATTGACAAAGATGGTCCTGAAGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTAATCTGGTCATTGACTaGTATTCTGCCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGNLVID*YSAIPL
Trigger: CAACGGGATGGCAGAATACAAGTCAATGACCAGATT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCCACAATCTGGTCATaGACTTGTATTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSTIWS*TCILPS
Trigger: GGATGGCAGAATACAAGTCAATGACCAGATTGTGGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CACAGACTGTGCTGGGTCCACACGCTTACATATGTGAACCTTCAAGTAACTACCAACTGCATGTTTGATTaGCAACTCTTTGAACTTGTG +
Preference number: 5 (lower is better)
Translates to: HRLCWVHTLTYVNLQVTTNCMFD*QLFELV
Trigger: CACAAGTTCAAAGAGTTGCAAATCAAACATGCAGTT...GGTAGTTACTTGAAGGTTCACATATGTAAGCGTGTGGACCCAGCACAGTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTGATGCCCTTAGTGATTaGGGATCTTTGGCATCATCT +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGDALSD*GSLASS
Trigger: AGATGATGCCAAAGATCCCAAATCACTAAGGGCATC...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGGAAGAGGAACTGTGTaGTGTTTGCCAGTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREGRGTV*CLPVLL
Trigger: CAGCAACACTGGCAAACACAACACAGTTCCTCTTCC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCCCATTTTGTGCCAGTaGAAAGCTGAGTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGPILCQ*KAEFGF
Trigger: AAAGCCAAACTCAGCTTTCAACTGGCACAAAATGGG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGAAAATATGGATGTTTaGGCTGGGGGTGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREENMDV*AGGGGT
Trigger: TGTGCCACCACCCCCAGCCAAAACATCCATATTTTC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTCAGCTGCCCAGTTTaGTCAGTAAGGTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREFSCPV*SVRCSR
Trigger: CCTGCTACACCTTACTGACAAAACTGGGCAGCTGAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTCAGCTGCCCAGTTTaGTCAGTAAGGTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKFSCPV*SVRCSR
Trigger: CCTGCTACACCTTACTGACAAAACTGGGCAGCTGAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATGGTTATAGAAACTGTTaGATGGCTTTCTCTCTAGAC +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHGYRNC*MAFSLD
Trigger: GTCTAGAGAGAAAGCCATCAAACAGTTTCTATAACC...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS TCA 90 bp AATGCCCAGTCACTGAGTATTCATTGTTTTCAGCCTTCTCAGAAATaGTGGCACTGGGAGAATCAGTGTTCTCAAATACTGCACTCAGTT +
Preference number: 5 (lower is better)
Translates to: NAQSLSIHCFQPSQK*WHWENQCSQILHSV
Trigger: AACTGAGTGCAGTATTTGAGAACACTGATTCTCCCAGTGCCATCATTTCTGAGAAGGCTGAAAACAATGAATACTCAGTGACTGGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTAATTCTGTTGACATaGGAGCCATATTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLILLT*EPYFLP
Trigger: GGGGAGGAAATATGGCTCCAATGTCAACAGAATTAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAACTGCAGCATTCTCGTaGGGTTCCATACCCATCTGC +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVATAAFS*GSIPIC
Trigger: GCAGATGGGTATGGAACCCAACGAGAATGCTGCAGT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAAATACTGCACTCAGTaGACTCACAGTTGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREKYCTQ*THSWGD
Trigger: GTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTATAACAAATCTGACGTaGCCCTTGGTGTTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGITNLT*PLVFLR
Trigger: TCTCAGAAACACCAAGGGCAACGTCAGATTTGTTAT...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATAACTGCATGTTTGATTaGCAACTCTTTGAACTTGTG +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHNCMFD*QLFELV
Trigger: CACAAGTTCAAAGAGTTGCAAATCAAACATGCAGTT...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTCTGCTTCCTGTCTTTaGATGAAATCAAGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHSASCL*MKSSSF
Trigger: AAAAGAGCTTGATTTCATCAAAAGACAGGAAGCAGA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTCTCCAGTGATGTTTaGGGCACTGAATTCAGATAC +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGFSSDV*GTEFRY
Trigger: GTATCTGAATTCAGTGCCCAAAACATCACTGGAGAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTTTTCCATTTTCTCTaGGGCCTTCCGAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREFFHFL*GLPSLL
Trigger: GAGAAGGCTCGGAAGGCCCAAGAGAAAATGGAAAAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCCTCATTTTCCCTCTaGCCACTTTGTTTCCAACAA +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSSFSL*PLCFQQ
Trigger: TTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCCCAACCACTTGTGTaGTTTTTGGCAACAACCAAA +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSQPLV*FLATTK
Trigger: TTTGGTTGTTGCCAAAAACAACACAAGTGGTTGGGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTAAATTTCATGTTGTaGGGAGGTGTTATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLNFML*GGVIWL
Trigger: CAGCCAGATAACACCTCCCAACAACATGAAATTTAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp GGAATACTTCTAGTGGAAGATACGAGATGCTGGGAACAGAGCAGAGATTCCCATTTATTGTTATTGCAGTaGCCAGACATTCCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: GILLVEDTRCWEQSRDSHLLLLQ*PDIPCN
Trigger: ATTGCAAGGAATGTCTGGCAACTGCAATAACAATAA...ATGGGAATCTCTGCTCTGTTCCCAGCATCTCGTATCTTCCACTAGAAGTATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTTCTGGTACTGGAGTaGCATTACTCTTGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLLVLE*HYSCEH
Trigger: ATGCTCACAAGAGTAATGCAACTCCAGTACCAGAAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTTCGGACTTTGGCATaGCCTTACTTTCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKFRTLA*PYFQHK
Trigger: CTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTTCGGACTTTGGCATaGCCTTACTTTCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREFRTLA*PYFQHK
Trigger: CTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAAAGGGATTTCGGACTTaGGCATTGCCTTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKKGFRT*ALPYFQ
Trigger: CTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCTT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAAGGGATTTCGGACTTaGGCATTGCCTTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREKGFRT*ALPYFQ
Trigger: CTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCTT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAAATCTGGTCATTGACTaGTATTCTGCCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKNLVID*YSAIPL
Trigger: CAACGGGATGGCAGAATACAAGTCAATGACCAGATT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAATCTGGTCATTGACTaGTATTCTGCCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQRENLVID*YSAIPL
Trigger: CAACGGGATGGCAGAATACAAGTCAATGACCAGATT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAATCTGACGTTGCCCTaGGTGTTTCTGAGAACTGTT +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQRENLTLP*VFLRTV
Trigger: AACAGTTCTCAGAAACACCAAGGGCAACGTCAGATT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTTCTTGTTGGTGGTTaGGTGATGGCAAGGAGATTC +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKFLVGG*VMARRF
Trigger: GAATCTCCTTGCCATCACCAAACCACCAACAAGAAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCCTTGAGTTTCTTTTaGACCACTGCTCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASLSFF*TTARSW
Trigger: CCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGGAAGAGGAACTGTGTaGTGTTTGCCAGTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAGRGTV*CLPVLL
Trigger: CAGCAACACTGGCAAACACAACACAGTTCCTCTTCC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTCCCTCTTGCCACTTaGTTTCCAACAACAATGGAG +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREFPLAT*FPTTME
Trigger: CTCCATTGTTGTTGGAAACAAAGTGGCAAGAGGGAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp CACACTTCTCTCAAACATCTTTCGAGTCTCAGTGAACTTGGAATATaGAGGGCCATCGTACATAGTGTCAAATCTACTAATTCGTTCAGA +
Preference number: 5 (lower is better)
Translates to: HTSLKHLSSLSELGI*RAIVHSVKSTNSFR
Trigger: TCTGAACGAATTAGTAGATTTGACACTATGTACGATGGCCCTTCATATTCCAAGTTCACTGAGACTCGAAAGATGTTTGAGAGAAGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCATTGGAGTATGTGTaGAAAACCTTAATAGGAGCA +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSLEYV*KTLIGA
Trigger: TGCTCCTATTAAGGTTTTCAACACATACTCCAATGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTCTTGGTCTTCAATTTTaGAATCTCTGCTTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGLGLQF*NLCFCN
Trigger: GTTACAGAAGCAGAGATTCAAAAATTGAAGACCAAG...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTCTGCTTCCTGTCTTTaGATGAAATCAAGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGSASCL*MKSSSF
Trigger: AAAAGAGCTTGATTTCATCAAAAGACAGGAAGCAGA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATTCTCCAGTGATGTTTaGGGCACTGAATTCAGATAC +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKFSSDV*GTEFRY
Trigger: GTATCTGAATTCAGTGCCCAAAACATCACTGGAGAA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAATTCTCCAGTGATGTTTaGGGCACTGAATTCAGATAC +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREFSSDV*GTEFRY
Trigger: GTATCTGAATTCAGTGCCCAAAACATCACTGGAGAA...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS-3UTR CAA 90 bp TCACTGTCCAGACTGAGAATTAAGAGCAAATCTTTCCCACACATTGGAGTAGGTTTTACATCTTATGCTTaGTGGGGCAATCAAACCAAA +
Preference number: 5 (lower is better)
Translates to: SLSRLRIKSKSFPHIGVGFTSYA*WGNQTK
Trigger: TTTGGTTTGATTGCCCCACAAAGCATAAGATGTAAA...ACCTACTCCAATGTGTGGGAAAGATTTGCTCTTAATTCTCAGTCTGGACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTTCCTTCTCCACTCTaGAGGATCTGGAATCAGGTC +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFPSPL*RIWNQV
Trigger: GACCTGATTCCAGATCCTCAAGAGTGGAGAAGGAAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAAACGGCATGCACATTGTaGAGAAGTTATCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKTACTL*RSYLFS
Trigger: AGAGAACAGATAACTTCTCAACAATGTGCATGCCGT...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACCACTTGTGTTGTTTTaGGCAACAACCAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKPLVLF*ATTKMP
Trigger: TGGCATTTTGGTTGTTGCCAAAAACAACACAAGTGG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGTTGCCAGACATTCCTaGCAATTCAGCCACAGTGTT +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAVARHS*QFSHSV
Trigger: AACACTGTGGCTGAATTGCAAGGAATGTCTGGCAAC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAAAGAAGAGGAGGGATTaGGGTTTCTCTTGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREKKRRD*GFSCLL
Trigger: AAGCAAACAAGAGAAACCCAAATCCCTCCTCTTCTT...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATGTTCCCCATCTGACTaGGGTTTGTCAAAGGTACTT +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVACSPSD*GLSKVL
Trigger: AAGTACCTTTGACAAACCCAAGTCAGATGGGGAACA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAAGGGATTTCGGACTTaGGCATTGCCTTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAKGFRT*ALPYFQ
Trigger: CTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTCCACTTCTTTCCCTaGCTGGAATTCCTTCGCAAA +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAFHFFP*LEFLRK
Trigger: TTTGCGAAGGAATTCCAGCAAGGGAAAGAAGTGGAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACCCATTTTGTGCCAGTaGAAAGCTGAGTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAPILCQ*KAEFGF
Trigger: AAAGCCAAACTCAGCTTTCAACTGGCACAAAATGGG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp ATTATAGTCACTGTGCATGTACACATGGGAACCATCAAAATTATTTaGATCTTCAGGTACTTCTTTTCCACAACTGGATGCAGAAGCATC +
Preference number: 5 (lower is better)
Translates to: IIVTVHVHMGTIKII*IFRYFFSTTGCRSI
Trigger: GATGCTTCTGCATCCAGTTGTGGAAAAGAAGTACCTGAAGATTCAAATAATTTTGATGGTTCCCATGTGTACATGCACAGTGACTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 90 bp AAGGTAAAATTATTGGTTTCTTGGATCCAGACTACAGACATAAGTTaGGAATGCCTTCCAAAGATTGAAGAAGAGGAGGGATTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: KVKLLVSWIQTTDIS*ECLPKIEEEEGFGF
Trigger: AAACCCAAATCCCTCCTCTTCTTCAATCTTTGGAAGGCATTCTCAACTTATGTCTGTAGTCTGGATCCAAGAAACCAATAATTTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATTAATTCTGTTGACATaGGAGCCATATTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVALILLT*EPYFLP
Trigger: GGGGAGGAAATATGGCTCCAATGTCAACAGAATTAA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAATCTGTAACTGCATGTTaGATTTGCAACTCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKSVTAC*ICNSLN
Trigger: GTTCAAAGAGTTGCAAATCAAACATGCAGTTACAGA...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp CCAGTGTTTTGGACCAAGACTAGATTTCCTGAGACTTTAAATACGCAAGACAAACTTGGTCTTCAATTTTaGAATCTCTGCTTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: PVFWTKTRFPETLNTQDKLGLQF*NLCFCN
Trigger: GTTACAGAAGCAGAGATTCAAAAATTGAAGACCAAG...TTTGTCTTGCGTATTTAAAGTCTCAGGAAATCTAGTCTTGGTCCAAAACACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAAGTGGATAACCTCATTTTTAGAGTCAACGCAGCAAAGAGAAGACATCTTCATTTCCTaGAGTTTCTTTTTGACCACT +
Preference number: 5 (lower is better)
Translates to: LSFGKWITSFLESTQQREDIFIS*SFFLTT
Trigger: AGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTC...TTCTCTTTGCTGCGTTGACTCTAAAAATGAGGTTATCCACTTTCCAAAGGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACAAGACATTGGAGCCTaGATTAGGTATCATGCACTA +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAQDIGA*IRYHAL
Trigger: TAGTGCATGATACCTAATCAAGGCTCCAATGTCTTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCCTCATTTTCCCTCTaGCCACTTTGTTTCCAACAA +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASSFSL*PLCFQQ
Trigger: TTGTTGGAAACAAAGTGGCAAGAGGGAAAATGAGGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCACAAACGGCATGCACATaGTTGAGAAGTTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAQTACT*LRSYLF
Trigger: GAACAGATAACTTCTCAACAATGTGCATGCCGTTTG...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCATCCCAACCACTTGTGTaGTTTTTGGCAACAACCAAA +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASQPLV*FLATTK
Trigger: TTTGGTTGTTGCCAAAAACAACACAAGTGGTTGGGA...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAGTGATTTGGGATCTTaGGCATCATCTTTTTCTCGT +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVASDLGS*ASSFSR
Trigger: ACGAGAAAAAGATGATGCCAAAGATCCCAAATCACT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433360.6
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAAACTGCATGTTTGATTaGCAACTCTTTGAACTTGTG +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVANCMFD*QLFELV
Trigger: CACAAGTTCAAAGAGTTGCAAATCAAACATGCAGTT...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS-3UTR CAA 90 bp AAATCTCTTAAAATCTATGAGCCATTCAATGTATACACAACGCAAGAAGTGGCAGGACTGAAGTCATCATaGAAGGTAAAATTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: KSLKIYEPFNVYTTQEVAGLKSS*KVKFFL
Trigger: GAGAAAGAATTTTACCTTCAATGATGACTTCAGTCC...TGCCACTTCTTGCGTTGTGTATACATTGAATGGCTCATAGATTTTAAGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340694.8
ENST00000433881.5
CDS CCA 72 bp TTCCCAAGCCCGGTTCGGGACGCAATCCCTCGGCCCTaGGGCAGGACCGGGAGAGCAGGTGACGCCAAGCGC +
Preference number: 6 (lower is better)
Translates to: FPSPVRDAIPRP*GRTGRAGDAKR
Trigger: GCGCTTGGCGTCACCTGCTCTCCCGGTCCTGCCCCAGGGCCGAGGGATTGCGTCCCGAACCGGGCTTGGGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS TCA 72 bp CTGCAGCTCCCGGCGGCTGCCAGGCGGATCCCACTGTaGCACGGAGAGAGACGAGCTCCCTGGCCACATTTA +
Preference number: 6 (lower is better)
Translates to: LQLPAAARRIPL*HGERRAPWPHL
Trigger: TAAATGTGGCCAGGGAGCTCGTCTCTCTCCGTGTCACAGTGGGATCCGCCTGGCAGCCGCCGGGAGCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS TCA 72 bp AGGAGGTCGCAGTCTAGCTTTGTGCCAAGAAGCACCTaGAGTCCTAACACATTGGCTGCAGCTCCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RRSQSSFVPRST*SPNTLAAAPGG
Trigger: GCCGCCGGGAGCTGCAGCCAATGTGTTAGGACTTCAGGTGCTTCTTGGCACAAAGCTAGACTGCGACCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS CCA 72 bp TGGCGCCTCTCCTGTTCCAGTGTCTGGCTTATCAACTaGGCAACCTCGCTCACTTGTCCTGGTTTTTCCCGC +
Preference number: 6 (lower is better)
Translates to: WRLSCSSVWLIN*ATSLTCPGFSR
Trigger: GCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGACACTGGAACAGGAGAGGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 72 bp AGCAGCTCTCTCTGGCGCCTCTCCTGTTCCAGTGTCTaGCTTATCAACTGGGCAACCTCGCTCACTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SSSLWRLSCSSV*LINWATSLTCP
Trigger: AGGACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGACACTGGAACAGGAGAGGCGCCAGAGAGAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp GAGCAGGTGACGCCAAGCGCTATGGTAGGAGGTCGCAGTCTAGCTTaGTGCCAAGAAGCACCTGAAGTCCTAACACATTGGCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: EQVTPSAMVGGRSLA*CQEAPEVLTHWLQL
Trigger: GAGCTGCAGCCAATGTGTTAGGACTTCAGGTGCTTCTTGGCACAAAGCTAGACTGCGACCTCCTACCATAGCGCTTGGCGTCACCTGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS TCA 72 bp AGGCATGCAAGGGGAACGAGTGGAGGTCTGAGCTGTTaGACATGGCTTGGGTGTCCAGTTTTCCAGTCTGCC +
Preference number: 6 (lower is better)
Translates to: RHARGTSGGLSC*TWLGCPVFQSA
Trigger: GGCAGACTGGAAAACTGGACACCCAAGCCATGTTCAACAGCTCAGACCTCCACTCGTTCCCCTTGCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS CCA 72 bp CTAGAGGGTCTCTGGCGTCTGTTCTTCACAGAGAGCTaGGCTCGAGTTTTCAGTGCTTTTGAATCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: LEGLWRLFFTES*ARVFSAFESRR
Trigger: GCGCCTGGATTCAAAAGCACTGAAAACTCGAGCCCAGCTCTCTGTGAAGAACAGACGCCAGAGACCCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp CATGAGAAAGGCATGCAAGGGGAACGAGTGGAGGTCTaGGCTGTTGAACATGGCTTGGGTGTCCAGTTTTCC +
Preference number: 6 (lower is better)
Translates to: HEKGMQGERVEV*AVEHGLGVQFS
Trigger: GGAAAACTGGACACCCAAGCCATGTTCAACAGCTCAGACCTCCACTCGTTCCCCTTGCATGCCTTTCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS GCA 72 bp CCAAGCGCTATGGTAGGAGGTCGCAGTCTAGCTTTGTaGCAAGAAGCACCTGAAGTCCTAACACATTGGCTG +
Preference number: 6 (lower is better)
Translates to: PSAMVGGRSLAL*QEAPEVLTHWL
Trigger: CAGCCAATGTGTTAGGACTTCAGGTGCTTCTTGGCACAAAGCTAGACTGCGACCTCCTACCATAGCGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS CCA 72 bp ACATGTCCTCATTCTCAGGCAGCTCAAAGACTTCAATaGCCATGTCGCTGCCAGGAAGGACAGGTCCTACCT +
Preference number: 6 (lower is better)
Translates to: TCPHSQAAQRLQ*PCRCQEGQVLP
Trigger: AGGTAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTGAAGTCTTTGAGCTGCCTGAGAATGAGGACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 72 bp GGAGAGAGGCCCCATTTCTGGGTCCAGTGGTTCTTCTaGAAATTCAGCTATGTGGTCAGACGAGAAGGGCAC +
Preference number: 6 (lower is better)
Translates to: GERPHFWVQWFF*KFSYVVRREGH
Trigger: GTGCCCTTCTCGTCTGACCACATAGCTGAATTTCAAGAAGAACCACTGGACCCAGAAATGGGGCCTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS CAA 72 bp ACGCCAAGCGCTATGGTAGGAGGTCGCAGTCTAGCTTaGTGCCAAGAAGCACCTGAAGTCCTAACACATTGG +
Preference number: 6 (lower is better)
Translates to: TPSAMVGGRSLA*CQEAPEVLTHW
Trigger: CCAATGTGTTAGGACTTCAGGTGCTTCTTGGCACAAAGCTAGACTGCGACCTCCTACCATAGCGCTTGGCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433881.5
CDS CAA 90 bp CTCCTGTTCCAGTGTCTGGCTTATCAACTGGGCAACCTCGCTCACTaGTCCTGGTTTTTCCCGCCCAATAACAAATCTGACGTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: LLFQCLAYQLGNLAH*SWFFPPNNKSDVAL
Trigger: AAGGGCAACGTCAGATTTGTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGACACTGGAACAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp CTGGGAGAATCAGTGTTCTCAAATACTGCACTCAGTTaGCTCACAGTTGGGGAGACAGCCTCAGTTCGGGAG +
Preference number: 6 (lower is better)
Translates to: LGESVFSNTALS*LTVGETASVRE
Trigger: CTCCCGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACTGATTCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp TCAGGACCATCTTTGTCAATGCTGTCGGGAGTCTGTTaGTTAGATGTGGAGTCCTCGGGTTCCTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SGPSLSMLSGVC*LDVESSGSLLC
Trigger: GCAGAGCAAGGAACCCGAGGACTCCACATCTAATCAACAGACTCCCGACAGCATTGACAAAGATGGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp GAGAGAGGCCCCATTTCTGGGTCCAGTGGTTCTTCTTaGAATTCAGCTATGTGGTCAGACGAGAAGGGCACA +
Preference number: 6 (lower is better)
Translates to: ERGPISGSSGSS*NSAMWSDEKGT
Trigger: TGTGCCCTTCTCGTCTGACCACATAGCTGAATTTCAAGAAGAACCACTGGACCCAGAAATGGGGCCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS GCA 72 bp TCTCAGGCAGCTCAAAGACTTCAATGGCCATGTCGCTaGCAGGAAGGACAGGTCCTACCTCATCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SQAAQRLQWPCR*QEGQVLPHLLL
Trigger: AAGAAGAAGATGAGGTAGGACCTGTCCTTCCTGGCAGCGACATGGCCATTGAAGTCTTTGAGCTGCCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 72 bp CTGGCTTATCAACTGGGCAACCTCGCTCACTTGTCCTaGTTTTTCCCGCCCAATAACAAATCTGACGTTGCC +
Preference number: 6 (lower is better)
Translates to: LAYQLGNLAHLS*FFPPNNKSDVA
Trigger: GGCAACGTCAGATTTGTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp AATGATGGCACTGGGAGAATCAGTGTTCTCAAATACTGCACTCAGTaGACTCACAGTTGGGGAGACAGCCTCAGTTCGGGAGCTAAGGCT +
Preference number: 6 (lower is better)
Translates to: NDGTGRISVLKYCTQ*THSWGDSLSSGAKA
Trigger: AGCCTTAGCTCCCGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACTGATTCTCCCAGTGCCATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp ACAAGGTTCTTCAGGACCATCTTTGTCAATGCTGTCGGGAGTCTGTaGATTAGATGTGGAGTCCTCGGGTTCCTTGCTCTGCTGGATCTC +
Preference number: 6 (lower is better)
Translates to: TRFFRTIFVNAVGSL*IRCGVLGFLALLDL
Trigger: GAGATCCAGCAGAGCAAGGAACCCGAGGACTCCACATCTAATCAACAGACTCCCGACAGCATTGACAAAGATGGTCCTGAAGAACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp CCACATAGAGGAGAGAGGCCCCATTTCTGGGTCCAGTGGTTCTTCTaGAAATTCAGCTATGTGGTCAGACGAGAAGGGCACATTGCTATC +
Preference number: 6 (lower is better)
Translates to: PHRGERPHFWVQWFF*KFSYVVRREGHIAI
Trigger: GATAGCAATGTGCCCTTCTCGTCTGACCACATAGCTGAATTTCAAGAAGAACCACTGGACCCAGAAATGGGGCCTCTCTCCTCTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS CCA 72 bp CCACATAGAGGAGAGAGGCCCCATTTCTGGGTCCAGTaGTTCTTCTTGAAATTCAGCTATGTGGTCAGACGA +
Preference number: 6 (lower is better)
Translates to: PHRGERPHFWVQ*FFLKFSYVVRR
Trigger: TCGTCTGACCACATAGCTGAATTTCAAGAAGAACCACTGGACCCAGAAATGGGGCCTCTCTCCTCTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS CAA 72 bp ACTGGGAGAATCAGTGTTCTCAAATACTGCACTCAGTaGACTCACAGTTGGGGAGACAGCCTCAGTTCGGGA +
Preference number: 6 (lower is better)
Translates to: TGRISVLKYCTQ*THSWGDSLSSG
Trigger: TCCCGAACTGAGGCTGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACTGATTCTCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 72 bp TTCAGGACCATCTTTGTCAATGCTGTCGGGAGTCTGTaGATTAGATGTGGAGTCCTCGGGTTCCTTGCTCTG +
Preference number: 6 (lower is better)
Translates to: FRTIFVNAVGSL*IRCGVLGFLAL
Trigger: CAGAGCAAGGAACCCGAGGACTCCACATCTAATCAACAGACTCCCGACAGCATTGACAAAGATGGTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 72 bp CAGTGTCTGGCTTATCAACTGGGCAACCTCGCTCACTaGTCCTGGTTTTTCCCGCCCAATAACAAATCTGAC +
Preference number: 6 (lower is better)
Translates to: QCLAYQLGNLAH*SWFFPPNNKSD
Trigger: GTCAGATTTGTTATTGGGCGGGAAAAACCAGGACAAGTGAGCGAGGTTGCCCAGTTGATAAGCCAGACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp CTCCCCATTCATCCTGAGGTTCACTCCCTCCAGCTTTCTCTTTCTTaGGGGAATAGCGGTTGTTCTGTCCTGATTCATGCACACTTCTCT +
Preference number: 6 (lower is better)
Translates to: LPIHPEVHSLQLSLS*GNSGCSVLIHAHFS
Trigger: AGAGAAGTGTGCATGAATCAGGACAGAACAACCGCTATTCCCCAAAGAAAGAGAAAGCTGGAGGGAGTGAACCTCAGGATGAATGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp GAGATGAATGTCCACCTTTCCCCCTTGTTTTGGCAATaGCTGCAGCATTCTCGTTGGGTTCCATACCCATCT +
Preference number: 6 (lower is better)
Translates to: EMNVHLSPLFWQ*LQHSRWVPYPS
Trigger: AGATGGGTATGGAACCCAACGAGAATGCTGCAGTCATTGCCAAAACAAGGGGGAAAGGTGGACATTCATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp CATCCCGTTGAGCAGCACCACCTTCTGTTACTGTCTTaGCGAATATTCCCAGCTTTTCAAGTCCAGCATCTG +
Preference number: 6 (lower is better)
Translates to: HPVEQHHLLLLS*RIFPAFQVQHL
Trigger: CAGATGCTGGACTTGAAAAGCTGGGAATATTCGTCAAGACAGTAACAGAAGGTGGTGCTGCTCAACGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp CCCTTTTTATCTGAAATTAGAGTCTCAGGAGAAGGCTaGAGGGAACTTGTAGGCGCAGGCAGGTTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: PFLSEIRVSGEG*RELVGAGRFLK
Trigger: CTTCAGGAACCTGCCTGCGCCTACAAGTTCCCTTCAGCCTTCTCCTGAGACTCTAATTTCAGATAAAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000424654.5
ENST00000433360.6
ENST00000456331.6
CDS TCA 72 bp ATATCCAGGCTCTCATCTGATGACAGTGCTAAGGACTaGGAGAGCCCTGGTGTTTTAGGTTCTGCTCCTAAG +
Preference number: 6 (lower is better)
Translates to: ISRLSSDDSAKD*ESPGVLGSAPK
Trigger: CTTAGGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCCTTAGCACTGTCATCAGATGAGAGCCTGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340694.8
ENST00000433881.5
CDS TCA 72 bp ATTCCAAGAGCCTCATCTGATGACAGTGCTAAGGACTaGGAGAGCCCTGGTGTTTTAGGTTCTGCTCCTAAG +
Preference number: 6 (lower is better)
Translates to: IPRASSDDSAKD*ESPGVLGSAPK
Trigger: CTTAGGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCCTTAGCACTGTCATCAGATGAGGCTCTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424654.5
ENST00000456331.6
CDS GCA 72 bp AATGATGGCACTGGGAGAATCAGTGTTCTCAAATACTaGACTCAGTTGACTCACAGTTGGGGAGACAGCCTC +
Preference number: 6 (lower is better)
Translates to: NDGTGRISVLKY*TQLTHSWGDSL
Trigger: GAGGCTGTCTCCCCAACTGTGAGTCAACTGAGTGCAGTATTTGAGAACACTGATTCTCCCAGTGCCATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 72 bp ATTCCTGAACGGCCCGATTCTGACACTGACTGTGTTTaGGAGACTGTCCATCATCAAGGATCTCATCTGATG +
Preference number: 6 (lower is better)
Translates to: IPERPDSDTDCV*ETVHHQGSHLM
Trigger: CATCAGATGAGATCCTTGATGATGGACAGTCTCCCAAACACAGTCAGTGTCAGAATCGGGCCGTTCAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289495.7
ENST00000433360.6
CDS CCA 72 bp ATTCCTGAACGGCCCGATTCTGACACTGACTGTGTTTaGGAGACTGTCCATCATCAAGGATCTCGTCATCTA +
Preference number: 6 (lower is better)
Translates to: IPERPDSDTDCV*ETVHHQGSRHL
Trigger: TAGATGACGAGATCCTTGATGATGGACAGTCTCCCAAACACAGTCAGTGTCAGAATCGGGCCGTTCAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340694.8
ENST00000433881.5
CDS CAA 72 bp GCCTTCCGAGCCTTCTCTAGAGACATCTTCATTTCCTaGAGTTTCTTTTTGACCACTGCTCGGTCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: AFRAFSRDIFIS*SFFLTTARSWD
Trigger: ATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTCTCTAGAGAAGGCTCGGAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp TTCTCTTGGGCCTTCCGAGCCTTCTCTAGAGACATCTTCATTTCCTaGAGTTTCTTTTTGACCACTGCTCGGTCCTGGGATGCTGTCATT +
Preference number: 6 (lower is better)
Translates to: FSWAFRAFSRDIFIS*SFFLTTARSWDAVI
Trigger: AATGACAGCATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTCTCTAGAGAAGGCTCGGAAGGCCCAAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp TTCCGAGCCTTCTCTAGAGACATCTTCATTTCCTTGAGTTTCTTTTaGACCACTGCTCGGTCCTGGGATGCTGTCATTCCAAGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: FRAFSRDIFISLSFF*TTARSWDAVIPRAS
Trigger: TGAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTCTCTAGAGAAGGCTCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424654.5
ENST00000456331.6
CDS CAA 90 bp TTCCGAGCCTTCTCTAGAGACATCTTCATTTCCTTGAGTTTCTTTTaGACCACTGCTCGGTCCTGGGATGCTGTCATTCCAAGAGCCTTA +
Preference number: 6 (lower is better)
Translates to: FRAFSRDIFISLSFF*TTARSWDAVIPRAL
Trigger: TAAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTCTCTAGAGAAGGCTCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS TCA 72 bp CAGTTCGATATGCATTCCTGTGAGGAGAGGCACTTCTaGGAGTGGTTCGTTCACCTGAAGACTCAGTTTTCA +
Preference number: 6 (lower is better)
Translates to: QFDMHSCEERHF*EWFVHLKTQFS
Trigger: TGAAAACTGAGTCTTCAGGTGAACGAACCACTCTCAGAAGTGCCTCTCCTCACAGGAATGCATATCGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000413325.1
ENST00000422324.1
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp CTTTTCCACAACTGGATGCAGAAGCATCAGGAGAGGTaGAATCACCACCTGCAAGTTCTTTCCTCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: LFHNWMQKHQER*NHHLQVLSSVA
Trigger: AGCAACAGAGGAAAGAACTTGCAGGTGGTGATTTCACCTCTCCTGATGCTTCTGCATCCAGTTGTGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp TTTGAACTTGTGACTGAGCTTGCTTGTGTCCAGTTCTaGTGGGGAAAACATGTCCTCATTCTCAGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: FELVTELACVQF*WGKHVLILRQL
Trigger: GAGCTGCCTGAGAATGAGGACATGTTTTCCCCATCAGAACTGGACACAAGCAAGCTCAGTCACAAGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp TCATCAAGGATCTCATCTGATGACAGTGCTAAGGACTaGGAGAGCCCTGGTGTTTTAGGTTCTGCTCCTAAG +
Preference number: 6 (lower is better)
Translates to: SSRISSDDSAKD*ESPGVLGSAPK
Trigger: CTTAGGAGCAGAACCTAAAACACCAGGGCTCTCTCAGTCCTTAGCACTGTCATCAGATGAGATCCTTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289495.7
ENST00000433360.6
CDS TCA 72 bp TATGTGTTACTGCTCACCAGCACCCTCGGCTGTAGTTaGCGTCATCTTTTCTGTCTTTTTGGACTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: YVLLLTSTLGCS*RHLFCLFGLPL
Trigger: CAGAGGAAGTCCAAAAAGACAGAAAAGATGACGTCAACTACAGCCGAGGGTGCTGGTGAGCAGTAACACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS GCA 72 bp AGACATCTTCATTTCCTTGAGTTTCTTTTTGACCACTaGTCGGTCCTGGGATGCTGTCATTCCAAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: RHLHFLEFLFDH*SVLGCCHSKSL
Trigger: GAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424654.5
ENST00000456331.6
CDS CCA 72 bp GCTCAGTGCCTGTCTCTCCCCAGTCTGAATTATACCTaGATCTCACCCTATACACATTATAGTCACTGTGCA +
Preference number: 6 (lower is better)
Translates to: AQCLSLPSLNYT*ISPYTHYSHCA
Trigger: TGCACAGTGACTATAATGTGTATAGGGTGAGATCCAGGTATAATTCAGACTGGGGAGAGACAGGCACTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 72 bp GTTGGCTTTGTGGTGAAGGGATTTCGGACTTTGGCATaGCCTTACTTTCAGCACAAGGTTCTTCAGGACCAT +
Preference number: 6 (lower is better)
Translates to: VGFVVKGFRTLA*PYFQHKVLQDH
Trigger: ATGGTCCTGAAGAACCTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCTTCACCACAAAGCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS GCA 72 bp AAATCTGACGTTGCCCTTGGTGTTTCTGAGAACTGTTaGTGCAAAATTCTGTGTCACACCCACCAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: KSDVALGVSENC*CKILCHTHQAD
Trigger: ATCAGCTTGGTGGGTGTGACACAGAATTTTGCAGCAACAGTTCTCAGAAACACCAAGGGCAACGTCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS GCA 72 bp GTCATTCCAAGAGCCTTAAGTTTATTTCCATCCAACTaGAGGAGCTGTTCTCCAGTGATGTTTTGGGCACTG +
Preference number: 6 (lower is better)
Translates to: VIPRALSLFPSN*RSCSPVMFWAL
Trigger: CAGTGCCCAAAACATCACTGGAGAACAGCTCCTGCAGTTGGATGGAAATAAACTTAAGGCTCTTGGAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS GCA 72 bp AGACATCTTCATTTCCTTGAGTTTCTTTTTGACCACTaGTCGGTCCTGGGATGCTGTCATTCCAAGAGCCTT +
Preference number: 6 (lower is better)
Translates to: RHLHFLEFLFDH*SVLGCCHSKSL
Trigger: AAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAGGAAATGAAGATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS CAA 72 bp CTAACAGTTGGCTTTGTGGTGAAGGGATTTCGGACTTaGGCATTGCCTTACTTTCAGCACAAGGTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LTVGFVVKGFRT*ALPYFQHKVLQ
Trigger: CTGAAGAACCTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCTTCACCACAAAGCCAACTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp CTTCTAACAGTTGGCTTTGTGGTGAAGGGATTTCGGACTTTGGCATaGCCTTACTTTCAGCACAAGGTTCTTCAGGACCATCTTTGTCAA +
Preference number: 6 (lower is better)
Translates to: LLTVGFVVKGFRTLA*PYFQHKVLQDHLCQ
Trigger: TTGACAAAGATGGTCCTGAAGAACCTTGTGCTGAAAGTAAGGCAATGCCAAAGTCCGAAATCCCTTCACCACAAAGCCAACTGTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp CAGCTTTTCTACACGTTTTTCAAGTTCATACTCAGCTaGAGCAGCCACAGGGTCAACTTCGTCATTTCTCCT +
Preference number: 6 (lower is better)
Translates to: QLFYTFFKFILS*SSHRVNFVISP
Trigger: AGGAGAAATGACGAAGTTGACCCTGTGGCTGCTTCAGCTGAGTATGAACTTGAAAAACGTGTAGAAAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp TCTTTTCCAAGGCCTGATACTGGCTTTGAGTCTCTTTaGGATGCTCATTCACTGTGTGGCATAATGTTTGGG +
Preference number: 6 (lower is better)
Translates to: SFPRPDTGFESL*DAHSLCGIMFG
Trigger: CCCAAACATTATGCCACACAGTGAATGAGCATCTCAAAGAGACTCAAAGCCAGTATCAGGCCTTGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS GCA 72 bp AGAGGTACTTTTAGAAGCCACTTCTGGTACTGGAGTTaGATTACTCTTGTGAGCATCCTCTGTATCAACACC +
Preference number: 6 (lower is better)
Translates to: RGTFRSHFWYWS*ITLVSILCINT
Trigger: GGTGTTGATACAGAGGATGCTCACAAGAGTAATGCAACTCCAGTACCAGAAGTGGCTTCTAAAAGTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS GCA 72 bp CTTGAGTTTCTTTTTGACCACTGCTCGGTCCTGGGATaGTGTCATTCCAAGAGCCTTAAGTTTATTTCCATC +
Preference number: 6 (lower is better)
Translates to: LEFLFDHCSVLG*CHSKSLKFISI
Trigger: GATGGAAATAAACTTAAGGCTCTTGGAATGACAGCATCCCAGGACCGAGCAGTGGTCAAAAAGAAACTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000433360.6
ENST00000433881.5
CDS CAA 72 bp ATAGTTGTTATTGTTATTGCAGTTGCCAGACATTCCTaGCAATTCAGCCACAGTGTTCTCGTCATCGTCGGC +
Preference number: 6 (lower is better)
Translates to: IVVIVIAVARHS*QFSHSVLVIVG
Trigger: GCCGACGATGACGAGAACACTGTGGCTGAATTGCAAGGAATGTCTGGCAACTGCAATAACAATAACAACTAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS CCA 72 bp CTTCCAACCAAATTAGCTTCAGCATCTTCTAACAGTTaGCTTTGTGGTGAAGGGATTTCGGACTTTGGCATT +
Preference number: 6 (lower is better)
Translates to: LPTKLASASSNS*LCGEGISDFGI
Trigger: AATGCCAAAGTCCGAAATCCCTTCACCACAAAGCCAACTGTTAGAAGATGCTGAAGCTAATTTGGTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS GCA 72 bp CTTGACGAATATTCCCAGCTTTTCAAGTCCAGCATCTaGTCCAACACCCATTCCAATAATACTTATACCAAG +
Preference number: 6 (lower is better)
Translates to: LDEYSQLFKSSI*SNTHSNNTYTK
Trigger: CTTGGTATAAGTATTATTGGAATGGGTGTTGGAGCAGATGCTGGACTTGAAAAGCTGGGAATATTCGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp TCACTGAGTATTCATTGTTTTCAGCCTTCTCAGAAATaGTGGCACTGGGAGAATCAGTGTTCTCAAATACTG +
Preference number: 6 (lower is better)
Translates to: SLSIHCFQPSQK*WHWENQCSQIL
Trigger: CAGTATTTGAGAACACTGATTCTCCCAGTGCCATCATTTCTGAGAAGGCTGAAAACAATGAATACTCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp TTATTGGTTTCTTGGATCCAGACTACAGACATAAGTTaGGAATGCCTTCCAAAGATTGAAGAAGAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LLVSWIQTTDIS*ECLPKIEEEEG
Trigger: TCCCTCCTCTTCTTCAATCTTTGGAAGGCATTCTCAACTTATGTCTGTAGTCTGGATCCAAGAAACCAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433360.6
CDS TCA 72 bp CTCAAACATCTTTCGAGTCTCAGTGAACTTGGAATATaGAGGGCCATCGTACATAGTGTCAAATCTACTAAT +
Preference number: 6 (lower is better)
Translates to: LKHLSSLSELGI*RAIVHSVKSTN
Trigger: ATTAGTAGATTTGACACTATGTACGATGGCCCTTCATATTCCAAGTTCACTGAGACTCGAAAGATGTTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS TCA 72 bp ACTGTGCATGTACACATGGGAACCATCAAAATTATTTaGATCTTCAGGTACTTCTTTTCCACAACTGGATGC +
Preference number: 6 (lower is better)
Translates to: TVHVHMGTIKII*IFRYFFSTTGC
Trigger: GCATCCAGTTGTGGAAAAGAAGTACCTGAAGATTCAAATAATTTTGATGGTTCCCATGTGTACATGCACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CCA 72 bp AAAACCAAGATACCTCTCTTCTCTAATCACCAGTATTaGGTCAAGAAAAGTACCTCTCAAATGGTATACGGT +
Preference number: 6 (lower is better)
Translates to: KTKIPLFSNHQY*VKKSTSQMVYG
Trigger: ACCGTATACCATTTGAGAGGTACTTTTCTTGACCCAATACTGGTGATTAGAGAAGAGAGGTATCTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340694.8
ENST00000413325.1
ENST00000422324.1
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6
CDS CAA 90 bp CATTATAGTCACTGTGCATGTACACATGGGAACCATCAAAATTATTaGAATCTTCAGGTACTTCTTTTCCACAACTGGATGCAGAAGCAT +
Preference number: 6 (lower is better)
Translates to: HYSHCACTHGNHQNY*NLQVLLFHNWMQKH
Trigger: ATGCTTCTGCATCCAGTTGTGGAAAAGAAGTACCTGAAGATTCAAATAATTTTGATGGTTCCCATGTGTACATGCACAGTGACTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289495.7
ENST00000340694.8
ENST00000424654.5
ENST00000433360.6
ENST00000433881.5
ENST00000456331.6