RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R3B (Homo sapiens)

Ensembl gene IDs: ENSG00000173281

Ensembl transcript IDs: ENST00000310455.4, ENST00000519699.1, ENST00000644687.1, ENST00000645121.2

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTTGCGAGCAGGTGAGGACTTGCCTTCTGAACTGTGCGGCAGGGTaGGCATCCCAGGTGTGCTGGCTGGGGGCTTGCATCCAGCACCCC +
Preference number: 1 (lower is better)
Translates to: LCEQVRTCLLNCAAG*ASQVCWLGACIQHP
Trigger: GGGGTGCTGGATGCAAGCCCCCAGCCAGCACACCTGGGATGCTCACCCTGCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTCGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR GCA 90 bp ACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTaGGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACACTG +
Preference number: 1 (lower is better)
Translates to: TLSSTDVHRLSWLPQ*ESAPATTAPLSETL
Trigger: CAGTGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR GCA 90 bp GAAGAAGGGTCTTTGCGAGCAGGTGAGGACTTGCCTTCTGAACTGTaGGGCAGGGTGAGCATCCCAGGTGTGCTGGCTGGGGGCTTGCAT +
Preference number: 1 (lower is better)
Translates to: EEGSLRAGEDLPSEL*GRVSIPGVLAGGLH
Trigger: ATGCAAGCCCCCAGCCAGCACACCTGGGATGCTCACCCTGCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTCGCAAAGACCCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CCA 90 bp ATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTaGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTG +
Preference number: 1 (lower is better)
Translates to: IPIHTLSSTDVHRLS*LPQCESAPATTAPL
Trigger: CAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR TCA 90 bp CGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGTAATCTGAACCTGGCTGGATTTGCT +
Preference number: 1 (lower is better)
Translates to: RGCHSAKARQPPLLL*VRHWLCNLNLAGFA
Trigger: AGCAAATCCAGCCAGGTTCAGATTACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CCA 90 bp TCAGCGCAGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTaGGCCAAAAGGAAGAAGACTGTTTGCGGCAGGAGGGTAGCAGAG +
Preference number: 1 (lower is better)
Translates to: SAQLPRPSENFTGQN*AKRKKTVCGRRVAE
Trigger: CTCTGCTACCCTCCTGCCGCAAACAGTCTTCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCTGCGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR GCA 90 bp ACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTaGTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGC +
Preference number: 1 (lower is better)
Translates to: TAQEPVGFDDWCVAL*WNTSVGSRSGRRKC
Trigger: GCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CCA 90 bp GCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTGCTaGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTG +
Preference number: 1 (lower is better)
Translates to: AQEPVGFDDWCVALC*NTSVGSRSGRRKCL
Trigger: CAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CCA 90 bp AATGAAGTTGCTTCCCTATTGCCGGACAACTGCACCTGTGACAGGTaGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGACTCGG +
Preference number: 1 (lower is better)
Translates to: NEVASLLPDNCTCDR*LVFLGQPGKDSGTR
Trigger: CCGAGTCCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCAGTTGTCCGGCAATAGGGAAGCAACTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CCA 90 bp CCTGCAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTaGTGTGTTGCTCTCTGCTGGAATACATCTGTGGGGTCAAGAAGC +
Preference number: 1 (lower is better)
Translates to: PAICDTAQEPVGFDD*CVALCWNTSVGSRS
Trigger: GCTTCTTGACCCCACAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR GCA 90 bp AACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGAAATGTaGGTCAGCTCAGTGTGTCACAGCAGAGATACACGTGGACGGGGA +
Preference number: 1 (lower is better)
Translates to: NKSQSHFSSAAALEM*VSSVCHSRDTRGRG
Trigger: TCCCCGTCCACGTGTATCTCTGCTGTGACACACTGAGCTGACGCACATTTCCAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CCA 90 bp TGCCTTGTCAGAACCCTGCAATCTGTGACACCGCACAGGAGCCAGTaGGTTTTGATGACTGGTGTGTTGCTCTCTGCTGGAATACATCTG +
Preference number: 1 (lower is better)
Translates to: CLVRTLQSVTPHRSQ*VLMTGVLLSAGIHL
Trigger: CAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTCTGACAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR TCA 90 bp TATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTaGGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGAAGACTGT +
Preference number: 1 (lower is better)
Translates to: YQTRREYISAAPEAF*EFHGTELGQKEEDC
Trigger: ACAGTCTTCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 90 bp CTTTTTCTTATGAACAGAGTGATCCTTAGTCGGGTAACATGTCAATaGCAGTGCACTCTGTGCCTCTCCTGCATTGTGGGGAGGGCACTT +
Preference number: 1 (lower is better)
Translates to: LFLMNRVILSRVTCQ*QCTLCLSCIVGRAL
Trigger: AAGTGCCCTCCCCACAATGCAGGAGAGGCACAGAGTGCACTGTCATTGACATGTTACCCGACTAAGGATCACTCTGTTCATAAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 90 bp ATAACCAAGAGCTGTCTGAAGGCAAATCTACAAGTCAAGGTGCAGTaGAGTCTCCAAGTAAGAAACCTGTCACCCTCTGAAGTGTGTAGG +
Preference number: 1 (lower is better)
Translates to: ITKSCLKANLQVKVQ*SLQVRNLSPSEVCR
Trigger: CCTACACACTTCAGAGGGTGACAGGTTTCTTACTTGGAGACTTCACTGCACCTTGACTTGTAGATTTGCCTTCAGACAGCTCTTGGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 90 bp TGTAACTTCTTGTCTCCGATTTCAGTGAACATGTCAGGAGAGACGTaGTCGGGACTCTCCCAGGACTACATTCAGGTGAGAAATTTTAGA +
Preference number: 1 (lower is better)
Translates to: CNFLSPISVNMSGET*SGLSQDYIQVRNFR
Trigger: TCTAAAATTTCTCACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACTGAAATCGGAGACAAGAAGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 90 bp AAACATTCACGGCTTTACAATGTGGGTTACAGAGCTTTACAACCATaGCCAGGAAAAACTGCTCGTAACAACAGCTGTCCTTCCCAGTTC +
Preference number: 1 (lower is better)
Translates to: KHSRLYNVGYRALQP*PGKTARNNSCPSQF
Trigger: GAACTGGGAAGGACAGCTGTTGTTACGAGCAGTTTTTCCTGGTCATGGTTGTAAAGCTCTGTAACCCACATTGTAAAGCCGTGAATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR GCA 90 bp TGGTTCTACATTCACACTGAAGTAATAGTGAAACATCATCACAGCTaGACTCTCAAAGCCCTCAGAGGTCCAGCAGTCTCTAAAAACTCG +
Preference number: 1 (lower is better)
Translates to: WFYIHTEVIVKHHHS*TLKALRGPAVSKNS
Trigger: CGAGTTTTTAGAGACTGCTGGACCTCTGAGGGCTTTGAGAGTGCAGCTGTGATGATGTTTCACTATTACTTCAGTGTGAATGTAGAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 90 bp GTAGTGGGGAGGGTTTACGGCTGCTTTAGAAGAGATAGTTATCACTaGATTACCATATTTCAAATTTTGACATGGGAATGTCTTAAGATC +
Preference number: 1 (lower is better)
Translates to: VVGRVYGCFRRDSYH*ITIFQILTWECLKI
Trigger: GATCTTAAGACATTCCCATGTCAAAATTTGAAATATGGTAATTCAGTGATAACTATCTCTTCTAAAGCAGCCGTAAACCCTCCCCACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGTCGTGGCTGCCACAGTaGGAAAGCGCGCCAGCCACC +
Preference number: 2 (lower is better)
Translates to: SRFTVSSASQVPAILLPQSWLPQ*ESAPAT
Trigger: GGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGA...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTGAACCCTGCAATCTGTaGCACCGCACAGGAGCCAGT +
Preference number: 2 (lower is better)
Translates to: RFTVSSASQVPAILLPQPEPCNL*HRTGAS
Trigger: ACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTC...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR GCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGACAGACTCTCGTGGCTaGCACAGTGCGAAAGCGCGC +
Preference number: 2 (lower is better)
Translates to: SRFTVSSASQVPAILLPQTDSRG*HSAKAR
Trigger: GCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTGTGGCTGGGGCTGAGTaGCTTTTGGCGACTGATGTC +
Preference number: 2 (lower is better)
Translates to: RFTVSSASQVPAILLPQPVAGAE*LLATDV
Trigger: GACATCAGTCGCCAAAAGCCACTCAGCCCCAGCCAC...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTCAGCAGAGATACACGTaGACGGGGAAGCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: RFTVSSASQVPAILLPQPQQRYT*TGKHSS
Trigger: GCTGCTGTGCTTCCCCGTCCACGTGTATCTCTGCTG...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCGAACCCTGCAATCTGTaGCACCGCACAGGAGCCAGT +
Preference number: 2 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAEPCNL*HRTGAS
Trigger: ACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTC...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGGAACCCTGCAATCTGTaGCACCGCACAGGAGCCAGT +
Preference number: 2 (lower is better)
Translates to: SRFTVSSASQVPAILLPQEPCNL*HRTGAS
Trigger: ACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTC...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR GCA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGACAGACTCTCGTGGCTaGCACAGTGCGAAAGCGCGC +
Preference number: 2 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQTDSRG*HSAKAR
Trigger: GCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTCCAAACGGGGCCTCATaGAAGTTCCACGTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLPNGAS*KFHVAP
Trigger: AGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTGG...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGGTGCACAGACTCTCGTaGCTGCCACAGTGCGAAAGC +
Preference number: 2 (lower is better)
Translates to: SRFTVSSASQVPAILLPQVHRLS*LPQCES
Trigger: GCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCAC...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAATCTCCACTGCACAGTaGGCAGAGCTAGGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPISTAQ*AELGLS
Trigger: AGACAAGCCTAGCTCTGCTCACTGTGCAGTGGAGAT...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCACCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPPPLLL*VRHWLC
Trigger: ACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGG...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCGTGGCTTTTGGCGACTaGTGTCCCACATCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAVAFGD*CPTSEW
Trigger: CCACTCAGATGTGGGACATCAGTCGCCAAAAGCCAC...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR GCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTATGGAAGTTCCACGTTaGTCCTCCCTGGCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: RFTVSSASQVPAILLPQPMEVPR*SSLAFH
Trigger: ATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCAT...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGGTGCACAGACTCTCGTaGCTGCCACAGTGCGAAAGC +
Preference number: 2 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQVHRLS*LPQCES
Trigger: GCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCAC...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTCTTCTGCAGCTGCACTaGAAATGTGCGTCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: RFTVSSASQVPAILLPQPLLQLH*KCASAQ
Trigger: CTGAGCTGACGCACATTTCCAGTGCAGCTGCAGAAG...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGGTGAGCTGCCCGCCTTaGCTTCCCAAAGTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGVSCPP*LPKVQG
Trigger: TCCCTGCACTTTGGGAAGCCAAGGCGGGCAGCTCAC...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR TCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGAAGTGTCCCCACTCTTaGCTGTCCTGCCTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: SRFTVSSASQVPAILLPQKCPHS*LSCLVR
Trigger: TCTGACAAGGCAGGACAGTCAAGAGTGGGGACACTT...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CAA 90 bp AGTGTGTCACAGCAGAGATACACGTGGACGGGGAAGCACAGCAGCTaGCAGGAAAGGCCTGGCTGGCAGAGAGCACCCAAAGATGAACAC +
Preference number: 2 (lower is better)
Translates to: SVSQQRYTWTGKHSS*QERPGWQRAPKDEH
Trigger: GTGTTCATCTTTGGGTGCTCTCTGCCAGCCAGGCCTTTCCTGCAAGCTGCTGTGCTTCCCCGTCCACGTGTATCTCTGCTGTGACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTAACTGTGCGGCAGGGTaGGCATCCCAGGTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGNCAAG*ASQVCW
Trigger: CCAGCACACCTGGGATGCTCACCCTGCCGCACAGTT...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGATGGAAGTTCCACGTTaGTCCTCCCTGGCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQMEVPR*SSLAFH
Trigger: ATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCAT...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTATCTCCACTGCACAGTaGGCAGAGCTAGGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSISTAQ*AELGLS
Trigger: AGACAAGCCTAGCTCTGCTCACTGTGCAGTGGAGAT...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCACTGGTTGTGTAATCTaGACCTGGCTGGATTTGCTG +
Preference number: 2 (lower is better)
Translates to: VISVHCKLRLPGSRHSPATGCVI*TWLDLL
Trigger: CAGCAAATCCAGCCAGGTTCAGATTACACAACCAGT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCACTGCTCCTTTGAGTaGGACACTGGTTGTGTAATC +
Preference number: 2 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAHCSFE*DTGCVI
Trigger: GATTACACAACCAGTGTCTCACTCAAAGGAGCAGTG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTCCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSPPLLL*VRHWLC
Trigger: ACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGG...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTCACGTTGCTCCTCCCTaGCCTTCCATCTCCACTGCA +
Preference number: 2 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSHVAPP*PSISTA
Trigger: TGCAGTGGAGATGGAAGGCCAGGGAGGAGCAACGTG...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGCACGTTGCTCCTCCCTaGCCTTCCATCTCCACTGCA +
Preference number: 2 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVHVAPP*PSISTA
Trigger: TGCAGTGGAGATGGAAGGCCAGGGAGGAGCAACGTG...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGTGCACAGACTCTCGTaGCTGCCACAGTGCGAAAGC +
Preference number: 2 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLVHRLS*LPQCES
Trigger: GCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCAC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCACAGCAGAGATACACGTaGACGGGGAAGCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: LLEYICGVKKREEEMPVSQQRYT*TGKHSS
Trigger: GCTGCTGTGCTTCCCCGTCCACGTGTATCTCTGCTG...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CAA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTaGCTCTCTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: SVTPHRSQWVLMTGV*LSAGIHLWGQEAGG
Trigger: TCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CAA 90 bp GAGTCTTTTATTGGAGAAGAAGGGTCTTTGCGAGCAGGTGAGGACTaGCCTTCTGAACTGTGCGGCAGGGTGAGCATCCCAGGTGTGCTG +
Preference number: 2 (lower is better)
Translates to: ESFIGEEGSLRAGED*PSELCGRVSIPGVL
Trigger: CAGCACACCTGGGATGCTCACCCTGCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTCCAATAAAAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR TCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGTGGCTTTTGGCGACTaGTGTCCCACATCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGVAFGD*CPTSEW
Trigger: CCACTCAGATGTGGGACATCAGTCGCCAAAAGCCAC...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR GCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTTTCCAGCACAGACGTaGACAGACTCTCGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLFPAQT*TDSRGC
Trigger: GCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAA...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR GCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGATTTCCAGCACAGACGTaGACAGACTCTCGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRFPAQT*TDSRGC
Trigger: GCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAA...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTGTGGCTGGGGCTGAGTaGCTTTTGGCGACTGATGTC +
Preference number: 2 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGVAGAE*LLATDV
Trigger: GACATCAGTCGCCAAAAGCCACTCAGCCCCAGCCAC...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACTTGCAGGAAAGGCCTaGCTGGCAGAGAGCACCCAA +
Preference number: 2 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQLAGKA*LAESTQ
Trigger: TTGGGTGCTCTCTGCCAGCCAGGCCTTTCCTGCAAG...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTCAGCAGAGATACACGTaGACGGGGAAGCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGQQRYT*TGKHSS
Trigger: GCTGCTGTGCTTCCCCGTCCACGTGTATCTCTGCTG...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 90 bp GTCAGAACCCTGCAATCTGTGACACCGCACAGGAGCCAGTGGGTTTaGATGACTGGTGTGTTGCTCTCTGCTGGAATACATCTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: VRTLQSVTPHRSQWV*MTGVLLSAGIHLWG
Trigger: ACCCCACAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTATCTCCACTGCACAGTaGGCAGAGCTAGGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSISTAQ*AELGLS
Trigger: AGACAAGCCTAGCTCTGCTCACTGTGCAGTGGAGAT...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCATCTCCACTGCACAGTaGGCAGAGCTAGGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLISTAQ*AELGLS
Trigger: AGACAAGCCTAGCTCTGCTCACTGTGCAGTGGAGAT...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCACCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: LLEYICGVKKREEEMPVSPPLLL*VRHWLC
Trigger: ACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGG...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR GCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGATGGAAGTTCCACGTTaGTCCTCCCTGGCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVMEVPR*SSLAFH
Trigger: ATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCAT...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR GCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGCTGCACTGGAAATGTaGGTCAGCTCAGTGTGTCAC +
Preference number: 2 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLAALEM*VSSVCH
Trigger: GTGACACACTGAGCTGACGCACATTTCCAGTGCAGC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGTTCTTTCATAAAGAATaGGACAAACCAGCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: SRFTVSSASQVPAILLPQFFHKE*DKPAKH
Trigger: GTGCTTGGCTGGTTTGTCTCATTCTTTATGAAAGAA...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR GCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGATGGATTACAGGCGCCTaGCACCACACTCAGCTAAAT +
Preference number: 2 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRWITGA*HHTQLN
Trigger: ATTTAGCTGAGTGTGGTGGCAGGCGCCTGTAATCCA...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTGAGAAGAAGGGTCTTTaGGAGCAGGTGAGGACTTGC +
Preference number: 2 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGEKKGL*EQVRTC
Trigger: GCAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTC...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 90 bp AGGAAACTCAGGCAAGTAGAGTCTTTTATTGGAGAAGAAGGGTCTTaGCGAGCAGGTGAGGACTTGCCTTCTGAACTGTGCGGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: RKLRQVESFIGEEGS*RAGEDLPSELCGRV
Trigger: CACCCTGCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTCCAATAAAAGACTCTACTTGCCTGAGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR TCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTCACTGCTCCTTTGAGTaGGACACTGGTTGTGTAATC +
Preference number: 2 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSHCSFE*DTGCVI
Trigger: GATTACACAACCAGTGTCTCACTCAAAGGAGCAGTG...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR TCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCACTGCTCCTTTGAGTaGGACACTGGTTGTGTAATC +
Preference number: 2 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGHCSFE*DTGCVI
Trigger: GATTACACAACCAGTGTCTCACTCAAAGGAGCAGTG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGCACGTTGCTCCTCCCTaGCCTTCCATCTCCACTGCA +
Preference number: 2 (lower is better)
Translates to: HELAENKSQSHFSSAAALHVAPP*PSISTA
Trigger: TGCAGTGGAGATGGAAGGCCAGGGAGGAGCAACGTG...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTCAGCTTCATCAGCACTaGCATAGGCTTGATTCCCAT +
Preference number: 2 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSQLHQH*HRLDSH
Trigger: ATGGGAATCAAGCCTATGCCAGTGCTGATGAAGCTG...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCAGCTTCATCAGCACTaGCATAGGCTTGATTCCCAT +
Preference number: 2 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGQLHQH*HRLDSH
Trigger: ATGGGAATCAAGCCTATGCCAGTGCTGATGAAGCTG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACAGCTTCATCAGCACTaGCATAGGCTTGATTCCCAT +
Preference number: 2 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQQLHQH*HRLDSH
Trigger: ATGGGAATCAAGCCTATGCCAGTGCTGATGAAGCTG...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATCCAAGTCCATGTCCCTaGGTGCTGGTAAAGTGTTCT +
Preference number: 2 (lower is better)
Translates to: AIKQGENTSAQLPRPSENPSPCP*VLVKCS
Trigger: AGAACACTTTACCAGCACCCAGGGACATGGACTTGG...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR TCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGATTCTTTCATAAAGAATaGGACAAACCAGCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRFFHKE*DKPAKH
Trigger: GTGCTTGGCTGGTTTGTCTCATTCTTTATGAAAGAA...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCGGGTCTCACGCGAGGTaGCTGGGGCTGAGTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIGSHAR*LGLSGF
Trigger: AAAGCCACTCAGCCCCAGCCACCTCGCGTGAGACCC...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGATCAGTATCTGCCTGTTaGTTATGTACAAAGCCACAA +
Preference number: 2 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRSVSAC*LCTKPQ
Trigger: TTGTGGCTTTGTACATAACCAACAGGCAGATACTGA...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCACAGACTCTCGTGGCTaGCACAGTGCGAAAGCGCGC +
Preference number: 2 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVITDSRG*HSAKAR
Trigger: GCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTACTCCTCTTCTTGCTTaGCTTAGGAAAACTTCACTT +
Preference number: 2 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGTPLLA*LRKTSL
Trigger: AAGTGAAGTTTTCCTAAGGCAAGCAAGAAGAGGAGT...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCCACGTTGCTCCTCCCTaGCCTTCCATCTCCACTGCA +
Preference number: 2 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIHVAPP*PSISTA
Trigger: TGCAGTGGAGATGGAAGGCCAGGGAGGAGCAACGTG...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCCTTGCAGGAAAGGCCTaGCTGGCAGAGAGCACCCAA +
Preference number: 2 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVILAGKA*LAESTQ
Trigger: TTGGGTGCTCTCTGCCAGCCAGGCCTTTCCTGCAAG...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCTTTCCAGCACAGACGTaGACAGACTCTCGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIFPAQT*TDSRGC
Trigger: GCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAA...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR TCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCAAGTGTCCCCACTCTTaGCTGTCCTGCCTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIKCPHS*LSCLVR
Trigger: TCTGACAAGGCAGGACAGTCAAGAGTGGGGACACTT...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR TCA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCAAGTGTCCCCACTCTTaGCTGTCCTGCCTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: NVISPKIITSCHPRVLPTKCPHS*LSCLVR
Trigger: TCTGACAAGGCAGGACAGTCAAGAGTGGGGACACTT...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCATGGAAGTTCCACGTTaGTCCTCCCTGGCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: NVISPKIITSCHPRVLPTMEVPR*SSLAFH
Trigger: ATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCAT...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGGCTGGAATACATCTGTaGGGTCAAGAAGCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVAGIHL*GQEAGG
Trigger: TCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGC...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGGTGGGTTTTGATGACTaGTGTGTTGCTCTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVVGFDD*CVALCW
Trigger: CCAGCAGAGAGCAACACACCAGTCATCAAAACCCAC...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 90 bp TCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACCACTAACTAATTaGCCTTTATTATCTTTTCCTGAACATCAGATCAATTGTGGAAGA +
Preference number: 2 (lower is better)
Translates to: SRSGRRKCLSQPLTN*PLLSFPEHQINCGR
Trigger: TCTTCCACAATTGATCTGATGTTCAGGAAAAGATAATAAAGGCAAATTAGTTAGTGGTTGAGACAGGCATTTCCTCCTCCCGCTTCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACCAGCTTCATCAGCACTaGCATAGGCTTGATTCCCAT +
Preference number: 2 (lower is better)
Translates to: NKALDFRLRTASFRSKNYQLHQH*HRLDSH
Trigger: ATGGGAATCAAGCCTATGCCAGTGCTGATGAAGCTG...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCACTCCTCTTCTTGCTTaGCTTAGGAAAACTTCACTT +
Preference number: 2 (lower is better)
Translates to: NVISPKIITSCHPRVLPTTPLLA*LRKTSL
Trigger: AAGTGAAGTTTTCCTAAGGCAAGCAAGAAGAGGAGT...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGAGTAAACACCAATCTTaGCCAAGAAAAATCACAGGT +
Preference number: 2 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVSKHQS*PRKITG
Trigger: ACCTGTGATTTTTCTTGGGCAAGATTGGTGTTTACT...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR GCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCGTAAAATTCAGGACCTaGATGAAATCAGTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIVKFRT*MKSVLL
Trigger: AAGCAAAACTGATTTCATGCAGGTCCTGAATTTTAC...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR GCA 72 bp CCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTaGCACAGTGCGAAAGCGCGCCAGCCACCACTGCTC +
Preference number: 3 (lower is better)
Translates to: PFPAQTCTDSRG*HSAKARQPPLL
Trigger: GAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR GCA 72 bp AGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTaGGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGT +
Preference number: 3 (lower is better)
Translates to: STDVHRLSWLPQ*ESAPATTAPLS
Trigger: ACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR GCA 72 bp TCTTTGCGAGCAGGTGAGGACTTGCCTTCTGAACTGTaGGGCAGGGTGAGCATCCCAGGTGTGCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: SLRAGEDLPSEL*GRVSIPGVLAG
Trigger: CCCAGCCAGCACACCTGGGATGCTCACCCTGCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTCGCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CCA 72 bp CATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTaGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACT +
Preference number: 3 (lower is better)
Translates to: HTLSSTDVHRLS*LPQCESAPATT
Trigger: AGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CCA 72 bp CGGACAACTGCACCTGTGACAGGTGGCTGGTCTTTCTaGGGCAACCTGGGAAAGATTCTGGGACTCGGGGGC +
Preference number: 3 (lower is better)
Translates to: RTTAPVTGGWSF*GNLGKILGLGG
Trigger: GCCCCCGAGTCCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCAGTTGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACACATGGAAGTTCCACGTaGCTCCTCCCTGGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: WLPQCESAPATTAPLSETHGSST*LLPGLP
Trigger: TGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATG...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCATGGAAGTTCCACGTaGCTCCTCCCTGGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAHGSST*LLPGLP
Trigger: TGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCGGGGCTGAGTGGCTTTaGGCGACTGATGTCCCACAT +
Preference number: 3 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAGAEWL*ATDVPH
Trigger: ATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCC...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCAGGAGCCAGTGGGTTTaGATGACTGGTGTGTTGCTC +
Preference number: 3 (lower is better)
Translates to: VISVHCKLRLPGSRHSPARSQWV*MTGVLL
Trigger: GAGCAACACACCAGTCATCAAAACCCACTGGCTCCT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCAAAGTGTCCCCACTCTaGACTGTCCTGCCTTGTCAG +
Preference number: 3 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAKVSPL*TVLPCQ
Trigger: CTGACAAGGCAGGACAGTCAAGAGTGGGGACACTTT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCAGCACTGGCATAGGCTaGATTCCCATCCATACCCTT +
Preference number: 3 (lower is better)
Translates to: VISVHCKLRLPGSRHSPASTGIG*IPIHTL
Trigger: AAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCATGGAAGTTCCACGTaGCTCCTCCCTGGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTHGSST*LLPGLP
Trigger: TGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATG...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGAGCACTGGCATAGGCTaGATTCCCATCCATACCCTT +
Preference number: 3 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQSTGIG*IPIHTL
Trigger: AAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGGGGGCTGAGTGGCTTTaGGCGACTGATGTCCCACAT +
Preference number: 3 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTGAEWL*ATDVPH
Trigger: ATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCC...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGGGGCTGAGTGGCTTTaGGCGACTGATGTCCCACAT +
Preference number: 3 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLGAEWL*ATDVPH
Trigger: ATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR TCA 72 bp CACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGTAATCTGAACCTGGCT +
Preference number: 3 (lower is better)
Translates to: HSAKARQPPLLL*VRHWLCNLNLA
Trigger: AGCCAGGTTCAGATTACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CCA 72 bp GTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTaGGACTCGGGGGCCACTTGTAACCATAACCAAGAG +
Preference number: 3 (lower is better)
Translates to: VAGLSGATWERF*DSGATCNHNQE
Trigger: CTCTTGGTTATGGTTACAAGTGGCCCCCGAGTCCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CCA 72 bp GCTTCCCTATTGCCGGACAACTGCACCTGTGACAGGTaGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCT +
Preference number: 3 (lower is better)
Translates to: ASLLPDNCTCDR*LVFLGQPGKDS
Trigger: AGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCAGTTGTCCGGCAATAGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR GCA 72 bp GAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTaGTGGAATACATCTGTGGGGTCAAGAAGCGGGAGG +
Preference number: 3 (lower is better)
Translates to: EPVGFDDWCVAL*WNTSVGSRSGR
Trigger: CCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CCA 72 bp CCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTGCTaGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: PVGFDDWCVALC*NTSVGSRSGRR
Trigger: CCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR TCA 72 bp AGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTaGGAATTTCACGGGACAGAACTGGGCCAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: RREYISAAPEAF*EFHGTELGQKE
Trigger: TTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCAGCACTGGCATAGGCTaGATTCCCATCCATACCCTT +
Preference number: 3 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLSTGIG*IPIHTL
Trigger: AAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGCTCAGTATCTGCCTGTaGGTTATGTACAAAGCCACA +
Preference number: 3 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGLSICL*VMYKAT
Trigger: TGTGGCTTTGTACATAACCAACAGGCAGATACTGAG...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATGGAGAAGAAGGGTCTTaGCGAGCAGGTGAGGACTTG +
Preference number: 3 (lower is better)
Translates to: AIKQGENTSAQLPRPSENGEEGS*RAGEDL
Trigger: CAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTCC...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTAGCACTGGCATAGGCTaGATTCCCATCCATACCCTT +
Preference number: 3 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGSTGIG*IPIHTL
Trigger: AAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGGGGCTGAGTGGCTTTaGGCGACTGATGTCCCACAT +
Preference number: 3 (lower is better)
Translates to: HELAENKSQSHFSSAAALGAEWL*ATDVPH
Trigger: ATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCC...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGCCACCACTGCTCCTTaGAGTGAGACACTGGTTGTG +
Preference number: 3 (lower is better)
Translates to: HELAENKSQSHFSSAAALATTAP*SETLVV
Trigger: CACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGGC...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR TCA 72 bp ATGAACAGAGTGATCCTTAGTCGGGTAACATGTCAATaGCAGTGCACTCTGTGCCTCTCCTGCATTGTGGGG +
Preference number: 3 (lower is better)
Translates to: MNRVILSRVTCQ*QCTLCLSCIVG
Trigger: CCCCACAATGCAGGAGAGGCACAGAGTGCACTGTCATTGACATGTTACCCGACTAAGGATCACTCTGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 72 bp TTGTCTCCGATTTCAGTGAACATGTCAGGAGAGACGTaGTCGGGACTCTCCCAGGACTACATTCAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: LSPISVNMSGET*SGLSQDYIQVR
Trigger: TCTCACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACTGAAATCGGAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR GCA 72 bp CAATCCCATTTCTCTTCTGCAGCTGCACTGGAAATGTaGGTCAGCTCAGTGTGTCACAGCAGAGATACACGT +
Preference number: 3 (lower is better)
Translates to: QSHFSSAAALEM*VSSVCHSRDTR
Trigger: ACGTGTATCTCTGCTGTGACACACTGAGCTGACGCACATTTCCAGTGCAGCTGCAGAAGAGAAATGGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR GCA 72 bp AACAAAAATGAAGTTGCTTCCCTATTGCCGGACAACTaGACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAA +
Preference number: 3 (lower is better)
Translates to: NKNEVASLLPDN*TCDRWLVFLGQ
Trigger: TTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCAGTTGTCCGGCAATAGGGAAGCAACTTCATTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGGGTGAGCTGCCCGCCTaGGCTTCCCAAAGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVGELPA*ASQSAG
Trigger: CCCTGCACTTTGGGAAGCCAAGGCGGGCAGCTCACC...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTAATCCAGCTTATTTATaGTACCCAGTTTGCAAATGC +
Preference number: 3 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGNPAYL*YPVCKC
Trigger: GCATTTGCAAACTGGGTACAATAAATAAGCTGGATT...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 72 bp ATAGAAGGCAGTATTCTTCAGACCCCCATACATCACTaGATGACAGCCCTGATGAGGAAACTCAGGCAAGTA +
Preference number: 3 (lower is better)
Translates to: IEGSILQTPIHH*MTALMRKLRQV
Trigger: TACTTGCCTGAGTTTCCTCATCAGGGCTGTCATTCAGTGATGTATGGGGGTCTGAAGAATACTGCCTTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 72 bp AGCTGTCTGAAGGCAAATCTACAAGTCAAGGTGCAGTaGAGTCTCCAAGTAAGAAACCTGTCACCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: SCLKANLQVKVQ*SLQVRNLSPSE
Trigger: TTCAGAGGGTGACAGGTTTCTTACTTGGAGACTTCACTGCACCTTGACTTGTAGATTTGCCTTCAGACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 72 bp CGGCTTTACAATGTGGGTTACAGAGCTTTACAACCATaGCCAGGAAAAACTGCTCGTAACAACAGCTGTCCT +
Preference number: 3 (lower is better)
Translates to: RLYNVGYRALQP*PGKTARNNSCP
Trigger: AGGACAGCTGTTGTTACGAGCAGTTTTTCCTGGTCATGGTTGTAAAGCTCTGTAACCCACATTGTAAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGCATGGAAGTTCCACGTaGCTCCTCCCTGGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVHGSST*LLPGLP
Trigger: TGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATG...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR GCA 72 bp AATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATaGCTGTCTCAACCACTAACTAATTTGCCTTTATTA +
Preference number: 3 (lower is better)
Translates to: NTSVGSRSGRRK*LSQPLTNLPLL
Trigger: TAATAAAGGCAAATTAGTTAGTGGTTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR-3UTR CAA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACAAAGTGTCCCCACTCTaGACTGTCCTGCCTTGTCAG +
Preference number: 3 (lower is better)
Translates to: NKALDFRLRTASFRSKNYKVSPL*TVLPCQ
Trigger: CTGACAAGGCAGGACAGTCAAGAGTGGGGACACTTT...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCCTCAGTATCTGCCTGTaGGTTATGTACAAAGCCACA +
Preference number: 3 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVILSICL*VMYKAT
Trigger: TGTGGCTTTGTACATAACCAACAGGCAGATACTGAG...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCGGAAGTCTCTCTTTTTaGAGACAGTTTCACTCTGTC +
Preference number: 3 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIGSLSF*RQFHSV
Trigger: GACAGAGTGAAACTGTCTCAAAAAAGAGAGACTTCC...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGCACAAGACTCTTAGCTaGAAAAGCCTGACAACTCTG +
Preference number: 3 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVHKTLS*KSLTTL
Trigger: CAGAGTTGTCAGGCTTTTCAAGCTAAGAGTCTTGTG...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CCA 72 bp GTCAACAAGACTAAAAACATTCACGGCTTTACAATGTaGGTTACAGAGCTTTACAACCATGACCAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: VNKTKNIHGFTM*VTELYNHDQEK
Trigger: TTTTTCCTGGTCATGGTTGTAAAGCTCTGTAACCCACATTGTAAAGCCGTGAATGTTTTTAGTCTTGTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR-3UTR CAA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCGGTTTCGAGGAGATATaGGATATGCAAATCAAATGT +
Preference number: 3 (lower is better)
Translates to: NVISPKIITSCHPRVLPTGFEEI*DMQIKC
Trigger: ACATTTGATTTGCATATCCAATATCTCCTCGAAACC...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR TCA 72 bp AGGGTTTACGGCTGCTTTAGAAGAGATAGTTATCACTaGATTACCATATTTCAAATTTTGACATGGGAATGT +
Preference number: 3 (lower is better)
Translates to: RVYGCFRRDSYH*ITIFQILTWEC
Trigger: ACATTCCCATGTCAAAATTTGAAATATGGTAATTCAGTGATAACTATCTCTTCTAAAGCAGCCGTAAACCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCGTGGCTGCCACAGTaGGAAAGCGCGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCSWLPQ*ESAPAT
Trigger: GGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGA...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCGGCGAAGTCCGTCCGTaGACGAGAGCTGCGCGGTCA +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCGEVRP*TRAARS
Trigger: TGACCGCGCAGCTCTCGTGCACGGACGGACTTCGCC...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR CCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCGTGACGGCAGGAGCTaGGCCCGGGCTCGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPARDGRS*ARARVR
Trigger: GCGAACCCGAGCCCGGGCCCAGCTCCTGCCGTCACG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR GCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTGGGAACAGGGACAGCTaGCGTGACGGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLGNRDS*RDGRSW
Trigger: CCAGCTCCTGCCGTCACGGCAGCTGTCCCTGTTCCC...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR CCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTGGGTCTCACGCGAGGTaGCTGGGGCTGAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPGSHAR*LGLSGF
Trigger: AAAGCCACTCAGCCCCAGCCACCTCGCGTGAGACCC...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCGTGGCTGCCACAGTaGGAAAGCGCGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPASWLPQ*ESAPAT
Trigger: GGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGA...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACATCCGTGCACGAGAGCTaGGCGGTCACCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETSVHES*AVTSSL
Trigger: GAGGGAGGAGGTGACCGCGCAGCTCTCGTGCACGGA...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR CCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGTCAGGGCCAGCCCCTaGTTGTCTGCGAAGGACACC +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPVRASP*LSAKDT
Trigger: GGTGTCCTTCGCAGACAACCAGGGGCTGGCCCTGAC...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCGGCAGCATACGCCCTaGGGGAACAGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRFTVSSASQVPAILLPQRQHTP*GNRDSC
Trigger: GCAGCTGTCCCTGTTCCCCCAGGGCGTATGCTGCCG...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR TCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAAACTGTGCGGCAGGGTaGGCATCCCAGGTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETNCAAG*ASQVCW
Trigger: CCAGCACACCTGGGATGCTCACCCTGCCGCACAGTT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTACAGACTCTCGTGGCTaGCACAGTGCGAAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLTDSRG*HSAKAR
Trigger: GCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCGTCAGGGCCAGCCCCTaGTTGTCTGCGAAGGACACC +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAVRASP*LSAKDT
Trigger: GGTGTCCTTCGCAGACAACCAGGGGCTGGCCCTGAC...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCCCAAACGGGGCCTCATaGAAGTTCCACGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCPNGAS*KFHVAP
Trigger: AGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTGG...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTGTGCACAGACTCTCGTaGCTGCCACAGTGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPVHRLS*LPQCES
Trigger: GCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCAC...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCGGGTCTCACGCGAGGTaGCTGGGGCTGAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAGSHAR*LGLSGF
Trigger: AAAGCCACTCAGCCCCAGCCACCTCGCGTGAGACCC...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTCTTGCAGGAAAGGCCTaGCTGGCAGAGAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPLAGKA*LAESTQ
Trigger: TTGGGTGCTCTCTGCCAGCCAGGCCTTTCCTGCAAG...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCCAGGCGGGAATGCAGTaGTGTGATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCQAGMQ*CDLGSL
Trigger: CAGTGAACCGAGATCACACCACTGCATTCCCGCCTG...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCACCCAGGTGTGCTGGCTaGGGGCTTGCATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPPRCAG*GLASST
Trigger: GGTGCTGGATGCAAGCCCCCAGCCAGCACACCTGGG...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCGTGACGGCAGGAGCTaGGCCCGGGCTCGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGRDGRS*ARARVR
Trigger: GCGAACCCGAGCCCGGGCCCAGCTCCTGCCGTCACG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR TCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCATTCCGAGAACACTTTaGCCATTGTCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCIPRTL*PLSGPA
Trigger: GGCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAAT...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCTTCTCGGGCAAGCTaGTGTCGAAGGAGAACGTGT +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCSSRAS*CRRRTC
Trigger: ACACGTTCTCCTTCGACATCAGCTTGCCCGAGAAGA...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCATCTCCACTGCACAGTaGGCAGAGCTAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCISTAQ*AELGLS
Trigger: AGACAAGCCTAGCTCTGCTCACTGTGCAGTGGAGAT...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTGTGGCTTTTGGCGACTaGTGTCCCACATCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPVAFGD*CPTSEW
Trigger: CCACTCAGATGTGGGACATCAGTCGCCAAAAGCCAC...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGAACCCTGCAATCTGTaGCACCGCACAGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPEPCNL*HRTGAS
Trigger: ACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTC...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAACTGTGCGGCAGGGTaGGCATCCCAGGTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPNCAAG*ASQVCW
Trigger: CCAGCACACCTGGGATGCTCACCCTGCCGCACAGTT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTGAGCAGGTGAGGACTTaGCTTCTGAACTGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPEQVRT*LLNCAA
Trigger: TGCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTC...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCGGGCCACCATTCCACTaGCTTCATTCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCGPPFH*LHSCCS
Trigger: TGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCC...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAGTCAGGGCCAGCCCCTaGTTGTCTGCGAAGGACACC +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPVRASP*LSAKDT
Trigger: GGTGTCCTTCGCAGACAACCAGGGGCTGGCCCTGAC...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTCACGTTGCTCCTCCCTaGCCTTCCATCTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLHVAPP*PSISTA
Trigger: TGCAGTGGAGATGGAAGGCCAGGGAGGAGCAACGTG...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAGGGTCTCACGCGAGGTaGCTGGGGCTGAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPGSHAR*LGLSGF
Trigger: AAAGCCACTCAGCCCCAGCCACCTCGCGTGAGACCC...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCACAGCAGAGATACACGTaGACGGGGAAGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPQQRYT*TGKHSS
Trigger: GCTGCTGTGCTTCCCCGTCCACGTGTATCTCTGCTG...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
3UTR CAA 72 bp AGGGTCTCACGCGAGGTGGCTGGGGCTGAGTGGCTTTaGGCGACTGATGTCCCACATCTGAGTGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RVSREVAGAEWL*ATDVPHLSGEQ
Trigger: CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGCCACCTCGCGTGAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCATCATGGGGCTAGATaGACAGGCTTTTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SRFTVSSASQVPAILLPQHHGAR*TGFWAA
Trigger: CGCGGCCCAAAAGCCTGTTCATCTAGCCCCATGATG...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTGTGGCTTTTGGCGACTaGTGTCCCACATCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLVAFGD*CPTSEW
Trigger: CCACTCAGATGTGGGACATCAGTCGCCAAAAGCCAC...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGACGCCTGACCTCAGGTaGGCTGCCCGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWTPDLR*AARLGF
Trigger: GAAGCCAAGGCGGGCAGCTCACCTGAGGTCAGGCGT...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTCGGGTAACATGTCAATaGCAGTGCACTCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPRVTCQ*QCTLCL
Trigger: GAGGCACAGAGTGCACTGTCATTGACATGTTACCCG...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCAGTTCTTGCCTCTGTTaGTGTCCCAGTACGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCSSCLC*CPSTSV
Trigger: GACAGACGTACTGGGACAGCAACAGAGGCAAGAACT...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAACAGACTCTCGTGGCTaGCACAGTGCGAAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPTDSRG*HSAKAR
Trigger: GCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGACGGAGTCTCGCTCTaGTGCCCAGGCGGGAATGCA +
Preference number: 4 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSDGVSL*CPGGNA
Trigger: TGCATTCCCGCCTGGGCAGCAGAGCGAGACTCCGTC...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGAGCCCGCAGGGTTGTaGCAAGCGCGACTACGTGAG +
Preference number: 4 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSEPAGL*QARLRE
Trigger: CTCACGTAGTCGCGCTTGCCACAACCCTGCGGGCTC...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTGGGCCACCATTCCACTaGCTTCATTCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPGPPFH*LHSCCS
Trigger: TGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCC...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCACGTTGCTCCTCCCTaGCCTTCCATCTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAHVAPP*PSISTA
Trigger: TGCAGTGGAGATGGAAGGCCAGGGAGGAGCAACGTG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCACCAAACGGGGCCTCATaGAAGTTCCACGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPPNGAS*KFHVAP
Trigger: AGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTGG...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGGGCTGAGTGGCTTTTaGCGACTGATGTCCCACATC +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPGLSGF*RLMSHI
Trigger: GATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCC...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGGTGGCTGGGGCTGAGTaGCTTTTGGCGACTGATGTC +
Preference number: 4 (lower is better)
Translates to: SRFTVSSASQVPAILLPQVAGAE*LLATDV
Trigger: GACATCAGTCGCCAAAAGCCACTCAGCCCCAGCCAC...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACACTTGCAGGAAAGGCCTaGCTGGCAGAGAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETLAGKA*LAESTQ
Trigger: TTGGGTGCTCTCTGCCAGCCAGGCCTTTCCTGCAAG...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTCCGCACAGGAGCCAGTaGGTTTTGATGACTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPPHRSQ*VLMTGV
Trigger: CACACCAGTCATCAAAACCCACTGGCTCCTGTGCGG...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTCCGCACAGGAGCCAGTaGGTTTTGATGACTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLPHRSQ*VLMTGV
Trigger: CACACCAGTCATCAAAACCCACTGGCTCCTGTGCGG...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGCCCAGGTGTGCTGGCTaGGGGCTTGCATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWPRCAG*GLASST
Trigger: GGTGCTGGATGCAAGCCCCCAGCCAGCACACCTGGG...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAACCTGGGAAAGATTCTaGGACTCGGGGGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPTWERF*DSGATC
Trigger: ACAAGTGGCCCCCGAGTCCCAGAATCTTTCCCAGGT...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTCCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPPPLLL*VRHWLC
Trigger: ACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGG...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTCCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLPPLLL*VRHWLC
Trigger: ACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGG...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAGAACACAATGAACAGTaGGGGTCTCACGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETEHNEQ*GSHARW
Trigger: CCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTC...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTGGGAATGCAGTGGTGTaGTCTCGGTTCACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPGNAVV*SRFTVS
Trigger: GCTTACAGTGAACCGAGATCACACCACTGCATTCCC...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACGCCTGACCTCAGGTaGGCTGCCCGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSTPDLR*AARLGF
Trigger: GAAGCCAAGGCGGGCAGCTCACCTGAGGTCAGGCGT...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCGCTCCCGAGGCCTTCTaGGAATTTCACGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAAPEAF*EFHGTE
Trigger: TTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGC...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCATCATGGGGCTAGATaGACAGGCGGGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAHHGAR*TGGFSS
Trigger: TGAGCTGAACCCGCCTGTTCATCTAGCCCCATGATG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR GCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCGCAAGGAAGGAGCCATaGAGTTGTATCTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCARKEP*SCICTR
Trigger: TCGAGTACAGATACAACTGCATGGCTCCTTCCTTGC...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCAAAGCTCTCGCTCTCTaGTGTCGTCAAGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCKALAL*CRQAHN
Trigger: ATTGTGAGCTTGACGACAGCAGAGAGCGAGAGCTTT...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAATGGAAGTTCCACGTTaGTCCTCCCTGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPMEVPR*SSLAFH
Trigger: ATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCAT...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTTCGTGGCTGCCACAGTaGGAAAGCGCGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGSWLPQ*ESAPAT
Trigger: GGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGA...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCTGCACTGGAAATGTaGGTCAGCTCAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPAALEM*VSSVCH
Trigger: GTGACACACTGAGCTGACGCACATTTCCAGTGCAGC...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGCTGCCCAGGCGGGAATaGAGTGGTGTGATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQLPRRE*SGVISV
Trigger: AACCGAGATCACACCACTGCATTCCCGCCTGGGCAG...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTGGATTACAGGCGCCTaGCACCACACTCAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPWITGA*HHTQLN
Trigger: ATTTAGCTGAGTGTGGTGGCAGGCGCCTGTAATCCA...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGAGAAGAAGGGTCTTTaGGAGCAGGTGAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPEKKGL*EQVRTC
Trigger: GCAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTC...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCTATTGCCGGACAACTaGACCTGTGACAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPALLPDN*TCDRWL
Trigger: CAGCCACCTGTCACAGGTGCAGTTGTCCGGCAATAG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACTCCGTGCACGAGAGCTaGGCGGTCACCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHSVHES*AVTSSL
Trigger: GAGGGAGGAGGTGACCGCGCAGCTCTCGTGCACGGA...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR GCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTGGCGAAGTCCGTCCGTaGACGAGAGCTGCGCGGTCA +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSGEVRP*TRAARS
Trigger: TGACCGCGCAGCTCTCGTGCACGGACGGACTTCGCC...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR CCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTGGGCCACCATTCCACTaGCTTCATTCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPGPPFH*LHSCCS
Trigger: TGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCC...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCACTTGCAGGAAAGGCCTaGCTGGCAGAGAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPLAGKA*LAESTQ
Trigger: TTGGGTGCTCTCTGCCAGCCAGGCCTTTCCTGCAAG...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCACTTCTGCAGCTGCACTaGAAATGTGCGTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPLLQLH*KCASAQ
Trigger: CTGAGCTGACGCACATTTCCAGTGCAGCTGCAGAAG...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTGTGTTGCTCTCTGCTaGAATACATCTGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCCVALC*NTSVGS
Trigger: TGACCCCACAGATGTATTCCAGCAGAGAGCAACACA...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCGCCTCTCCTGCATTGTaGGGAGGGCACTTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAASPAL*GGHFLR
Trigger: CCTTAAGAAGTGCCCTCCCCACAATGCAGGAGAGGC...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAACCTGGGAAAGATTCTaGGACTCGGGGGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETTWERF*DSGATC
Trigger: ACAAGTGGCCCCCGAGTCCCAGAATCTTTCCCAGGT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCACTTTCTGGGGCAACCTaGGAAAGATTCTGGGACTCG +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPLSGAT*ERFWDS
Trigger: CGAGTCCCAGAATCTTTCCCAGGTTGCCCCAGAAAG...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGGCAGCATACGCCCTaGGGGAACAGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTRQHTP*GNRDSC
Trigger: GCAGCTGTCCCTGTTCCCCCAGGGCGTATGCTGCCG...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR TCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTCAGACGTGGTCGGCCTaGAGTCGATTTCTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLQTWSA*SRFLKS
Trigger: AGACTTTAGAAATCGACTTCAGGCCGACCACGTCTG...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACACAATGGCCTTGTCCTTaGGCACACAGTTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETQWPCP*AHSSQG
Trigger: GCCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTG...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCAATGGCCTTGTCCTTaGGCACACAGTTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAQWPCP*AHSSQG
Trigger: GCCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTTCAAATGCGAGGTTCTaGACCTTCACAGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPSNARF*TFTVPA
Trigger: TGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGA...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCATCAAATGCGAGGTTCTaGACCTTCACAGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPSNARF*TFTVPA
Trigger: TGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGA...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGGAACGTGTCCCTGTCTaGACCGGCATAAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SRFTVSSASQVPAILLPQERVPV*TGISVL
Trigger: AAGGACACTTATGCCGGTTCAGACAGGGACACGTTC...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAATCTCCACTGCACAGTaGGCAGAGCTAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETISTAQ*AELGLS
Trigger: AGACAAGCCTAGCTCTGCTCACTGTGCAGTGGAGAT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAGTGGCTTTTGGCGACTaGTGTCCCACATCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPVAFGD*CPTSEW
Trigger: CCACTCAGATGTGGGACATCAGTCGCCAAAAGCCAC...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGGAACACAATGAACAGTaGGGGTCTCACGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQEHNEQ*GSHARW
Trigger: CCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTC...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCAAGTGTCCCCACTCTTaGCTGTCCTGCCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAKCPHS*LSCLVR
Trigger: TCTGACAAGGCAGGACAGTCAAGAGTGGGGACACTT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAAAGTGTCCCCACTCTTaGCTGTCCTGCCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETKCPHS*LSCLVR
Trigger: TCTGACAAGGCAGGACAGTCAAGAGTGGGGACACTT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCACTGGTCTTGAACGCCTaGCCTCAGGTGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSLVLNA*PQVSCP
Trigger: CGGGCAGCTCACCTGAGGTCAGGCGTTCAAGACCAG...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGATGTCAGGAGAGACGTaGTCGGGACTCTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGMSGET*SGLSQD
Trigger: GTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACAT...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAAACCTTCACAGTGCCTaGAATGGCCTTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPNLHSA*NGLVLE
Trigger: CTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTT...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTCTGAACCTTCACAGTaGCTGCAATGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLSEPSQ*LQWPCP
Trigger: AGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGA...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTTCTGAACCTTCACAGTaGCTGCAATGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPSEPSQ*LQWPCP
Trigger: AGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGA...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCAGTACGTCTGTCCATTaGACTCGTAGTACACAGCAA +
Preference number: 4 (lower is better)
Translates to: RAQTLVAATVRKRASHHCSTSVH*TRSTQQ
Trigger: TTGCTGTGTACTACGAGTGCAATGGACAGACGTACT...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCATGGAAGTTCCACGTTaGTCCTCCCTGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAMEVPR*SSLAFH
Trigger: ATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCAT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTTCGTGGCTGCCACAGTaGGAAAGCGCGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGSWLPQ*ESAPAT
Trigger: GGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGA...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCATTTCCAGCACAGACGTaGACAGACTCTCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPFPAQT*TDSRGC
Trigger: GCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAA...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGACGGAGTCTCGCTCTaGTGCCCAGGCGGGAATGCA +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGDGVSL*CPGGNA
Trigger: TGCATTCCCGCCTGGGCAGCAGAGCGAGACTCCGTC...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAGAGAAGAAGGGTCTTTaGGAGCAGGTGAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETEKKGL*EQVRTC
Trigger: GCAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTC...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAAGGAAGAAGACTGTTTaGGGCAGGAGGGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETRKKTV*GRRVAE
Trigger: CTCTGCTACCCTCCTGCCGCAAACAGTCTTCTTCCT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAAATCCGGTCCACTGTaGGGCTTGGTCATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPKSGPL*GLVIPW
Trigger: CCAGGGAATGACCAAGCCCCACAGTGGACCGGATTT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTCGAGGGCTTCCGAACTaGTCAAAGGATATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPRGLPN*SKDIPK
Trigger: TTTGGGAATATCCTTTGACCAGTTCGGAAGCCCTCG...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGCACGTTGCTCCTCCCTaGCCTTCCATCTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGHVAPP*PSISTA
Trigger: TGCAGTGGAGATGGAAGGCCAGGGAGGAGCAACGTG...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGGTGCACAGACTCTCGTaGCTGCCACAGTGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGVHRLS*LPQCES
Trigger: GCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCAC...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGTGGCTGGGGCTGAGTaGCTTTTGGCGACTGATGTC +
Preference number: 4 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSVAGAE*LLATDV
Trigger: GACATCAGTCGCCAAAAGCCACTCAGCCCCAGCCAC...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGGTCTCACGCGAGGTaGCTGGGGCTGAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGGSHAR*LGLSGF
Trigger: AAAGCCACTCAGCCCCAGCCACCTCGCGTGAGACCC...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGCAGCAGAGATACACGTaGACGGGGAAGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGQQRYT*TGKHSS
Trigger: GCTGCTGTGCTTCCCCGTCCACGTGTATCTCTGCTG...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTGTGGGTTTTGATGACTaGTGTGTTGCTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLVGFDD*CVALCW
Trigger: CCAGCAGAGAGCAACACACCAGTCATCAAAACCCAC...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTTTAACTCAGCCCGGATaGTCCTATAGTTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPLTQPG*SYSSCL
Trigger: GAGGCAAGAACTATAGGATCATCCGGGCTGAGTTAA...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCATCAGATTTTTCCGGTaGCTCGGGGTAAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAIRFFR*LGVNVG
Trigger: CCCCACATTTACCCCGAGTCACCGGAAAAATCTGAT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAGGGAATGCAGTGGTGTaGTCTCGGTTCACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPGNAVV*SRFTVS
Trigger: GCTTACAGTGAACCGAGATCACACCACTGCATTCCC...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTAGAGCTTTACAACCATaGCCAGGAAAAACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: HRLSWLPQCESAPATTAPRALQP*PGKTAR
Trigger: ACGAGCAGTTTTTCCTGGTCATGGTTGTAAAGCTCT...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCTGAACCTTCACAGTaGCTGCAATGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPASEPSQ*LQWPCP
Trigger: AGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGA...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTCACGGTCTTCTCAAATaGGAGGTTCTGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLHGLLK*EVLNLH
Trigger: GTGAAGGTTCAGAACCTCGCATTTGAGAAGACCGTG...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAAGTTCTTGCCTCTGTTaGTGTCCCAGTACGTCTGTC +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETSSCLC*CPSTSV
Trigger: GACAGACGTACTGGGACAGCAACAGAGGCAAGAACT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTAAATCCGGTCCACTGTaGGGCTTGGTCATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSKSGPL*GLVIPW
Trigger: CCAGGGAATGACCAAGCCCCACAGTGGACCGGATTT...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTCGAGGGCTTCCGAACTaGTCAAAGGATATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLRGLPN*SKDIPK
Trigger: TTTGGGAATATCCTTTGACCAGTTCGGAAGCCCTCG...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGGTGCACAGACTCTCGTaGCTGCCACAGTGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWVHRLS*LPQCES
Trigger: GCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCAC...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGGTGGCTGGGGCTGAGTaGCTTTTGGCGACTGATGTC +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWVAGAE*LLATDV
Trigger: GACATCAGTCGCCAAAAGCCACTCAGCCCCAGCCAC...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTCAGGCGGGAATGCAGTaGTGTGATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSQAGMQ*CDLGSL
Trigger: CAGTGAACCGAGATCACACCACTGCATTCCCGCCTG...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGTGAGCTGCCCGCCTTaGCTTCCCAAAGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVVSCPP*LPKVQG
Trigger: TCCCTGCACTTTGGGAAGCCAAGGCGGGCAGCTCAC...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGAGTGAGCTGCCCGCCTTaGCTTCCCAAAGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRVSCPP*LPKVQG
Trigger: TCCCTGCACTTTGGGAAGCCAAGGCGGGCAGCTCAC...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGCATCATGGGGCTAGATaGACAGGCTTTTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVHHGAR*TGFWAA
Trigger: CGCGGCCCAAAAGCCTGTTCATCTAGCCCCATGATG...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTATTCCGAGAACACTTTaGCCATTGTCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSIPRTL*PLSGPA
Trigger: GGCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAAT...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGCAATGGCCTTGTCCTTaGGCACACAGTTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGQWPCP*AHSSQG
Trigger: GCCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTG...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTTCTTCTCGGGCAAGCTaGTGTCGAAGGAGAACGTGT +
Preference number: 4 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSSSRAS*CRRRTC
Trigger: ACACGTTCTCCTTCGACATCAGCTTGCCCGAGAAGA...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTTAACTCAGCCCGGATaGTCCTATAGTTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPALTQPG*SYSSCL
Trigger: GAGGCAAGAACTATAGGATCATCCGGGCTGAGTTAA...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACACACTGCTCCTTTGAGTaGGACACTGGTTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETHCSFE*DTGCVI
Trigger: GATTACACAACCAGTGTCTCACTCAAAGGAGCAGTG...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGAACCCTGCAATCTGTaGCACCGCACAGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLEPCNL*HRTGAS
Trigger: ACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTCATCCCCTATCCATTaGGAGGGAAGATCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLSSPIH*EGRSRK
Trigger: TTTTCTGGATCTTCCCTCTCAATGGATAGGGGATGA...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGATGTCAGGAGAGACGTaGTCGGGACTCTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVMSGET*SGLSQD
Trigger: GTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACAT...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGCATCATGGGGCTAGATaGACAGGCGGGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWHHGAR*TGGFSS
Trigger: TGAGCTGAACCCGCCTGTTCATCTAGCCCCATGATG...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS-3UTR GCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTCACTGGCTTCATTCTTaGTGCTCAGCTGAATACAAG +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPHWLHS*CSAEYK
Trigger: CTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTG...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCAAAGCTCTCGCTCTCTaGTGTCGTCAAGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAKALAL*CRQAHN
Trigger: ATTGTGAGCTTGACGACAGCAGAGAGCGAGAGCTTT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAAAAGCTCTCGCTCTCTaGTGTCGTCAAGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETKALAL*CRQAHN
Trigger: ATTGTGAGCTTGACGACAGCAGAGAGCGAGAGCTTT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCACGGTCTTCTCAAATaGGAGGTTCTGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAHGLLK*EVLNLH
Trigger: GTGAAGGTTCAGAACCTCGCATTTGAGAAGACCGTG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTAGTACGTCTGTCCATTaGACTCGTAGTACACAGCAA +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPSTSVH*TRSTQQ
Trigger: TTGCTGTGTACTACGAGTGCAATGGACAGACGTACT...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAGTTCTTGCCTCTGTTaGTGTCCCAGTACGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPSSCLC*CPSTSV
Trigger: GACAGACGTACTGGGACAGCAACAGAGGCAAGAACT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTATGGAAGTTCCACGTTaGTCCTCCCTGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSMEVPR*SSLAFH
Trigger: ATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCAT...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAGCGGGAGGAGGAAATaGCTGTCTCAACCACTAACT +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPSGRRK*LSQPLT
Trigger: AGTTAGTGGTTGAGACAGGCATTTCCTCCTCCCGCT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCACTGCCCAGGCGGGAATaGAGTGGTGTGATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSLPRRE*SGVISV
Trigger: AACCGAGATCACACCACTGCATTCCCGCCTGGGCAG...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATGACGGAGTCTCGCTCTaGTGCCCAGGCGGGAATGCA +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENDGVSL*CPGGNA
Trigger: TGCATTCCCGCCTGGGCAGCAGAGCGAGACTCCGTC...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAAAATCCAGGCAACTGTaGTTCCACTCCTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETKSRQL*FHSSSC
Trigger: GCAAGAAGAGGAGTGGAAGCACAGTTGCCTGGATTT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGTTCACCTTCTTCTCCTaGACAGCCGGGGCCACCATT +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWFTFFS*TAGATI
Trigger: AATGGTGGCCCCGGCTGTCCAGGAGAAGAAGGTGAA...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCGAGGGCTTCCGAACTaGTCAAAGGATATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPARGLPN*SKDIPK
Trigger: TTTGGGAATATCCTTTGACCAGTTCGGAAGCCCTCG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGTGGCTGGGGCTGAGTaGCTTTTGGCGACTGATGTC +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLVAGAE*LLATDV
Trigger: GACATCAGTCGCCAAAAGCCACTCAGCCCCAGCCAC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCCTTGCAGGAAAGGCCTaGCTGGCAGAGAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLLAGKA*LAESTQ
Trigger: TTGGGTGCTCTCTGCCAGCCAGGCCTTTCCTGCAAG...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGGCTGGAATACATCTGTaGGGTCAAGAAGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGAGIHL*GQEAGG
Trigger: TCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGC...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTGTGTTGCTCTCTGCTaGAATACATCTGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPACVALC*NTSVGS
Trigger: TGACCCCACAGATGTATTCCAGCAGAGAGCAACACA...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACATTCACGGGACAGAACTaGGCCAAAAGGAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETFTGQN*AKRKKT
Trigger: AGTCTTCTTCCTTTTGGCCCAGTTCTGTCCCGTGAA...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGACCTGTGACAGGTGGCTaGTCTTTCTGGGGCAACCTG +
Preference number: 4 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRPVTGG*SFWGNL
Trigger: CAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGG...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 72 bp ATTGGAGAAGAAGGGTCTTTGCGAGCAGGTGAGGACTaGCCTTCTGAACTGTGCGGCAGGGTGAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: IGEEGSLRAGED*PSELCGRVSIP
Trigger: TGGGATGCTCACCCTGCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGGTGGCTTTTGGCGACTaGTGTCCCACATCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTVAFGD*CPTSEW
Trigger: CCACTCAGATGTGGGACATCAGTCGCCAAAAGCCAC...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACGAACACAATGAACAGTaGGGGTCTCACGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHEHNEQ*GSHARW
Trigger: CCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTC...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAGAACCCTGCAATCTGTaGCACCGCACAGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQEPCNL*HRTGAS
Trigger: ACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTC...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGCTCCCGAGGCCTTCTaGGAATTTCACGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLAPEAF*EFHGTE
Trigger: TTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTGCTCCTCAGGGCACTTaGGGGAATAAATATAAAACA +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPAPQGT*GNKYKT
Trigger: TGTTTTATATTTATTCCCTCAAGTGCCCTGAGGAGC...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCACTGGCTTCATTCTTaGTGCTCAGCTGAATACAAG +
Preference number: 4 (lower is better)
Translates to: SRFTVSSASQVPAILLPQHWLHS*CSAEYK
Trigger: CTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTG...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGATGGAAGTTCCACGTTaGTCCTCCCTGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWMEVPR*SSLAFH
Trigger: ATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCAT...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACTTTCCAGCACAGACGTaGACAGACTCTCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHFPAQT*TDSRGC
Trigger: GCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAA...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTTTTCCAGCACAGACGTaGACAGACTCTCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGFPAQT*TDSRGC
Trigger: GCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAA...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTTTTCCAGCACAGACGTaGACAGACTCTCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSFPAQT*TDSRGC
Trigger: GCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAA...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTTTCACCTTCTTCTCCTaGACAGCCGGGGCCACCATT +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGFTFFS*TAGATI
Trigger: AATGGTGGCCCCGGCTGTCCAGGAGAAGAAGGTGAA...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCAAATCCGGTCCACTGTaGGGCTTGGTCATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLKSGPL*GLVIPW
Trigger: CCAGGGAATGACCAAGCCCCACAGTGGACCGGATTT...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTAAATCCGGTCCACTGTaGGGCTTGGTCATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSKSGPL*GLVIPW
Trigger: CCAGGGAATGACCAAGCCCCACAGTGGACCGGATTT...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAGTAACTTGGCCACTCTaGAAACAGACCATAGGAACA +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETVTWPL*KQTIGT
Trigger: TGTTCCTATGGTCTGTTTCCAGAGTGGCCAAGTTAC...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCACCAAACGGGGCCTCATaGAAGTTCCACGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSPNGAS*KFHVAP
Trigger: AGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTGG...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCCAAACGGGGCCTCATaGAAGTTCCACGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGPNGAS*KFHVAP
Trigger: AGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTGG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGGGCTGAGTGGCTTTTaGCGACTGATGTCCCACATC +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLGLSGF*RLMSHI
Trigger: GATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGGCTGGAATACATCTGTaGGGTCAAGAAGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWAGIHL*GQEAGG
Trigger: TCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGC...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCACCGCACAGGAGCCAGTaGGTTTTGATGACTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSPHRSQ*VLMTGV
Trigger: CACACCAGTCATCAAAACCCACTGGCTCCTGTGCGG...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCCGCACAGGAGCCAGTaGGTTTTGATGACTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGPHRSQ*VLMTGV
Trigger: CACACCAGTCATCAAAACCCACTGGCTCCTGTGCGG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCAGGCGGGAATGCAGTaGTGTGATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGQAGMQ*CDLGSL
Trigger: CAGTGAACCGAGATCACACCACTGCATTCCCGCCTG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGCAGGCGGGAATGCAGTaGTGTGATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVQAGMQ*CDLGSL
Trigger: CAGTGAACCGAGATCACACCACTGCATTCCCGCCTG...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTTGCACCTGTGACAGGTaGCTGGTCTTTCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSCTCDR*LVFLGQ
Trigger: TTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTATTCCGAGAACACTTTaGCCATTGTCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGIPRTL*PLSGPA
Trigger: GGCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAAT...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTGAACGTGTCCCTGTCTaGACCGGCATAAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSERVPV*TGISVL
Trigger: AAGGACACTTATGCCGGTTCAGACAGGGACACGTTC...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACGAACGTGTCCCTGTCTaGACCGGCATAAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHERVPV*TGISVL
Trigger: AAGGACACTTATGCCGGTTCAGACAGGGACACGTTC...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGAACGTGTCCCTGTCTaGACCGGCATAAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLERVPV*TGISVL
Trigger: AAGGACACTTATGCCGGTTCAGACAGGGACACGTTC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGTCTTCTCGGGCAAGCTaGTGTCGAAGGAGAACGTGT +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTSSRAS*CRRRTC
Trigger: ACACGTTCTCCTTCGACATCAGCTTGCCCGAGAAGA...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGACTGGTTGTGTAATCTaGACCTGGCTGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGTGCVI*TWLDLL
Trigger: CAGCAAATCCAGCCAGGTTCAGATTACACAACCAGT...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGPPLLL*VRHWLC
Trigger: ACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCCACCACTGCTCCTTTaGGTGAGACACTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTPPLLL*VRHWLC
Trigger: ACACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGG...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTGAACACAATGAACAGTaGGGGTCTCACGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGEHNEQ*GSHARW
Trigger: CCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTC...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCAAGTGTCCCCACTCTTaGCTGTCCTGCCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLKCPHS*LSCLVR
Trigger: TCTGACAAGGCAGGACAGTCAAGAGTGGGGACACTT...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACGGGAATGCAGTGGTGTaGTCTCGGTTCACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHGNAVV*SRFTVS
Trigger: GCTTACAGTGAACCGAGATCACACCACTGCATTCCC...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAGGGAATGCAGTGGTGTaGTCTCGGTTCACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSGNAVV*SRFTVS
Trigger: GCTTACAGTGAACCGAGATCACACCACTGCATTCCC...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCGGGTAACATGTCAATaGCAGTGCACTCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGRVTCQ*QCTLCL
Trigger: GAGGCACAGAGTGCACTGTCATTGACATGTTACCCG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACACCCCCATACATCACTaGATGACAGCCCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHTPIHH*MTALMR
Trigger: CCTCATCAGGGCTGTCATTCAGTGATGTATGGGGGT...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAGAGCTTTACAACCATaGCCAGGAAAAACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPRALQP*PGKTAR
Trigger: ACGAGCAGTTTTTCCTGGTCATGGTTGTAAAGCTCT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGCTGCACTGGAAATGTaGGTCAGCTCAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGAALEM*VSSVCH
Trigger: GTGACACACTGAGCTGACGCACATTTCCAGTGCAGC...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACGCTGCACTGGAAATGTaGGTCAGCTCAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHAALEM*VSSVCH
Trigger: GTGACACACTGAGCTGACGCACATTTCCAGTGCAGC...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGAGCGGGAGGAGGAAATaGCTGTCTCAACCACTAACT +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWSGRRK*LSQPLT
Trigger: AGTTAGTGGTTGAGACAGGCATTTCCTCCTCCCGCT...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACTATTGCCGGACAACTaGACCTGTGACAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQLLPDN*TCDRWL
Trigger: CAGCCACCTGTCACAGGTGCAGTTGTCCGGCAATAG...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGAAGGCAAACCTCTCTTaGCGCAAGGAAGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTKANLS*RKEGAM
Trigger: CATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTT...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAATTCACCTTCTTCTCCTaGACAGCCGGGGCCACCATT +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQFTFFS*TAGATI
Trigger: AATGGTGGCCCCGGCTGTCCAGGAGAAGAAGGTGAA...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGCAGCTTCATCAGCACTaGCATAGGCTTGATTCCCAT +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGQLHQH*HRLDSH
Trigger: ATGGGAATCAAGCCTATGCCAGTGCTGATGAAGCTG...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAGGGCTGAGTGGCTTTTaGCGACTGATGTCCCACATC +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQGLSGF*RLMSHI
Trigger: GATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCC...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACCTTCTGCAGCTGCACTaGAAATGTGCGTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHLLQLH*KCASAQ
Trigger: CTGAGCTGACGCACATTTCCAGTGCAGCTGCAGAAG...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCTTCTGCAGCTGCACTaGAAATGTGCGTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGLLQLH*KCASAQ
Trigger: CTGAGCTGACGCACATTTCCAGTGCAGCTGCAGAAG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGCTGGAATACATCTGTaGGGTCAAGAAGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLAGIHL*GQEAGG
Trigger: TCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTTCAGTATCTGCCTGTTaGTTATGTACAAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPSVSAC*LCTKPQ
Trigger: TTGTGGCTTTGTACATAACCAACAGGCAGATACTGA...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTCAGTATCTGCCTGTTaGTTATGTACAAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLSVSAC*LCTKPQ
Trigger: TTGTGGCTTTGTACATAACCAACAGGCAGATACTGA...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGCATCCCAGGTGTGCTaGCTGGGGGCTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALASQVC*LGACIQ
Trigger: CTGGATGCAAGCCCCCAGCCAGCACACCTGGGATGC...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATCCTGTGACAGGTGGCTaGTCTTTCTGGGGCAACCTG +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENPVTGG*SFWGNL
Trigger: CAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGG...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 72 bp CCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTaGCTCTCTGCTGGAATACATCTGTGGGGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PHRSQWVLMTGV*LSAGIHLWGQE
Trigger: TTCTTGACCCCACAGATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGTTCTTGCTGCTCAGCTaGATACAAGGCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVFLLLS*IQGLSG
Trigger: ACCACTGAGGCCTTGTATTCAGCTGAGCAGCAAGAA...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTTTCTTGCTGCTCAGCTaGATACAAGGCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGFLLLS*IQGLSG
Trigger: ACCACTGAGGCCTTGTATTCAGCTGAGCAGCAAGAA...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAATTCCGAGAACACTTTaGCCATTGTCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQIPRTL*PLSGPA
Trigger: GGCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAAT...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACCAGACGTGGTCGGCCTaGAGTCGATTTCTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHQTWSA*SRFLKS
Trigger: AGACTTTAGAAATCGACTTCAGGCCGACCACGTCTG...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGAATCAGATTTTTCCGGTaGCTCGGGGTAAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRIRFFR*LGVNVG
Trigger: CCCCACATTTACCCCGAGTCACCGGAAAAATCTGAT...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTATCAGATTTTTCCGGTaGCTCGGGGTAAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGIRFFR*LGVNVG
Trigger: CCCCACATTTACCCCGAGTCACCGGAAAAATCTGAT...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTATCAGATTTTTCCGGTaGCTCGGGGTAAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSIRFFR*LGVNVG
Trigger: CCCCACATTTACCCCGAGTCACCGGAAAAATCTGAT...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACATTCTTTCATAAAGAATaGGACAAACCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETFFHKE*DKPAKH
Trigger: GTGCTTGGCTGGTTTGTCTCATTCTTTATGAAAGAA...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTAAGTGCATTTCCCCTTaGACTCTGTGTACAAAAATA +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPKCISP*TLCTKI
Trigger: TATTTTTGTACACAGAGTTCAAGGGGAAATGCACTT...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGGCAAGGAAGGAGCCATaGAGTTGTATCTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWARKEP*SCICTR
Trigger: TCGAGTACAGATACAACTGCATGGCTCCTTCCTTGC...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGAACCTTCACAGTGCCTaGAATGGCCTTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTNLHSA*NGLVLE
Trigger: CTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTT...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAAGTTGCTTCCCTATTaGCGGACAACTGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSKLLPY*RTTAPV
Trigger: CACAGGTGCAGTTGTCCGGCAATAGGGAAGCAACTT...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCATACCCAGTTTGCAAATaGTCCTCAGGGCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSYPVCK*SSGHLR
Trigger: CCTCAAGTGCCCTGAGGAGCATTTGCAAACTGGGTA...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTAGAAACCCACTCAAATaGTTCATGTCTTCCAATAGA +
Preference number: 4 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLRNPLK*FMSSNR
Trigger: TCTATTGGAAGACATGAAGCATTTGAGTGGGTTTCT...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTAAGGCAAACCTCTCTTaGCGCAAGGAAGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGKANLS*RKEGAM
Trigger: CATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTT...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAGGGCCACCATTCCACTaGCTTCATTCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQGPPFH*LHSCCS
Trigger: TGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCC...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTCTTCTGCAGCTGCACTaGAAATGTGCGTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGLLQLH*KCASAQ
Trigger: CTGAGCTGACGCACATTTCCAGTGCAGCTGCAGAAG...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGTGGGTTTTGATGACTaGTGTGTTGCTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGVGFDD*CVALCW
Trigger: CCAGCAGAGAGCAACACACCAGTCATCAAAACCCAC...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGTGGGTTTTGATGACTaGTGTGTTGCTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLVGFDD*CVALCW
Trigger: CCAGCAGAGAGCAACACACCAGTCATCAAAACCCAC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTCCAAGTCCATGTCCCTaGGTGCTGGTAAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSPSPCP*VLVKCS
Trigger: AGAACACTTTACCAGCACCCAGGGACATGGACTTGG...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTCTGTTACCCGATGTCTaGTATGTTTACATAAAACGT +
Preference number: 4 (lower is better)
Translates to: RFTVSSASQVPAILLPQPLLPDV*YVYIKR
Trigger: ACGTTTTATGTAAACATACCAGACATCGGGTAACAG...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACTTTCTGGGGCAACCTaGGAAAGATTCTGGGACTCG +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQLSGAT*ERFWDS
Trigger: CGAGTCCCAGAATCTTTCCCAGGTTGCCCCAGAAAG...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTGGTGGCTGGTCTTTCTaGGGCAACCTGGGAAAGATT +
Preference number: 4 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGGGWSF*GNLGKI
Trigger: AATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACC...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAATCAAATGCGAGGTTCTaGACCTTCACAGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQSNARF*TFTVPA
Trigger: TGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGA...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACTTAACTCAGCCCGGATaGTCCTATAGTTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHLTQPG*SYSSCL
Trigger: GAGGCAAGAACTATAGGATCATCCGGGCTGAGTTAA...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGACTGGTTGTGTAATCTaGACCTGGCTGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTTGCVI*TWLDLL
Trigger: CAGCAAATCCAGCCAGGTTCAGATTACACAACCAGT...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCACTGCTCCTTTGAGTaGGACACTGGTTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTHCSFE*DTGCVI
Trigger: GATTACACAACCAGTGTCTCACTCAAAGGAGCAGTG...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGCACTGCTCCTTTGAGTaGGACACTGGTTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVHCSFE*DTGCVI
Trigger: GATTACACAACCAGTGTCTCACTCAAAGGAGCAGTG...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCATTCTTTCATAAAGAATaGGACAAACCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPFFHKE*DKPAKH
Trigger: GTGCTTGGCTGGTTTGTCTCATTCTTTATGAAAGAA...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGTTCTTTCATAAAGAATaGGACAAACCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQFFHKE*DKPAKH
Trigger: GTGCTTGGCTGGTTTGTCTCATTCTTTATGAAAGAA...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCAAGGAAGGAGCCATaGAGTTGTATCTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVARKEP*SCICTR
Trigger: TCGAGTACAGATACAACTGCATGGCTCCTTCCTTGC...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCGCAAGGAAGGAGCCATaGAGTTGTATCTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLARKEP*SCICTR
Trigger: TCGAGTACAGATACAACTGCATGGCTCCTTCCTTGC...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCATGGCTTCATTCTTGCTaGTCAGCTGAATACAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSWLHSC*SAEYKA
Trigger: GGCCTTGTATTCAGCTGAGCAGCAAGAATGAAGCCA...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTAAAGCTCTCGCTCTCTaGTGTCGTCAAGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSKALAL*CRQAHN
Trigger: ATTGTGAGCTTGACGACAGCAGAGAGCGAGAGCTTT...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCACACGGTCTTCTCAAATaGGAGGTTCTGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSHGLLK*EVLNLH
Trigger: GTGAAGGTTCAGAACCTCGCATTTGAGAAGACCGTG...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAAGCGGGAGGAGGAAATaGCTGTCTCAACCACTAACT +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQSGRRK*LSQPLT
Trigger: AGTTAGTGGTTGAGACAGGCATTTCCTCCTCCCGCT...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTAAATCCAGGCAACTGTaGTTCCACTCCTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGKSRQL*FHSSSC
Trigger: GCAAGAAGAGGAGTGGAAGCACAGTTGCCTGGATTT...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAAGAAACCCACTCAAATaGTTCATGTCTTCCAATAGA +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETRNPLK*FMSSNR
Trigger: TCTATTGGAAGACATGAAGCATTTGAGTGGGTTTCT...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCACGAGGGCTTCCGAACTaGTCAAAGGATATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSRGLPN*SKDIPK
Trigger: TTTGGGAATATCCTTTGACCAGTTCGGAAGCCCTCG...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACCAGCTTCATCAGCACTaGCATAGGCTTGATTCCCAT +
Preference number: 4 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHQLHQH*HRLDSH
Trigger: ATGGGAATCAAGCCTATGCCAGTGCTGATGAAGCTG...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGCAGCTTCATCAGCACTaGCATAGGCTTGATTCCCAT +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVQLHQH*HRLDSH
Trigger: ATGGGAATCAAGCCTATGCCAGTGCTGATGAAGCTG...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGTGTGTTGCTCTCTGCTaGAATACATCTGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVCVALC*NTSVGS
Trigger: TGACCCCACAGATGTATTCCAGCAGAGAGCAACACA...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCATGAAGATGAGTCCTTaGTTCTACATTCACACTGAA +
Preference number: 4 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAMKMSP*FYIHTE
Trigger: TTCAGTGTGAATGTAGAACCAAGGACTCATCTTCAT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 72 bp CTGCAATCTGTGACACCGCACAGGAGCCAGTGGGTTTaGATGACTGGTGTGTTGCTCTCTGCTGGAATACAT +
Preference number: 4 (lower is better)
Translates to: LQSVTPHRSQWV*MTGVLLSAGIH
Trigger: ATGTATTCCAGCAGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAACTGGTTGTGTAATCTaGACCTGGCTGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQTGCVI*TWLDLL
Trigger: CAGCAAATCCAGCCAGGTTCAGATTACACAACCAGT...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGCAAGTCAAGGTGCAGTaGAGTCTCCAAGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVQVKVQ*SLQVRN
Trigger: GTTTCTTACTTGGAGACTTCACTGCACCTTGACTTG...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGGCTCCTCAGGGCACTTaGGGGAATAAATATAAAACA +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWAPQGT*GNKYKT
Trigger: TGTTTTATATTTATTCCCTCAAGTGCCCTGAGGAGC...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTTGTCTCCGATTTCAGTaGACATGTCAGGAGAGACGT +
Preference number: 4 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGCLRFQ*TCQERR
Trigger: ACGTCTCTCCTGACATGTTCACTGAAATCGGAGACA...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGCACTGGCTTCATTCTTaGTGCTCAGCTGAATACAAG +
Preference number: 4 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVHWLHS*CSAEYK
Trigger: CTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTG...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATAACCTTCACAGTGCCTaGAATGGCCTTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENNLHSA*NGLVLE
Trigger: CTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTT...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACACGGTCTTCTCAAATaGGAGGTTCTGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQHGLLK*EVLNLH
Trigger: GTGAAGGTTCAGAACCTCGCATTTGAGAAGACCGTG...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTAGTACGTCTGTCCATTaGACTCGTAGTACACAGCAA +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSSTSVH*TRSTQQ
Trigger: TTGCTGTGTACTACGAGTGCAATGGACAGACGTACT...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATTACCCAGTTTGCAAATaGTCCTCAGGGCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENYPVCK*SSGHLR
Trigger: CCTCAAGTGCCCTGAGGAGCATTTGCAAACTGGGTA...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGGTAACTTGGCCACTCTaGAAACAGACCATAGGAACA +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTVTWPL*KQTIGT
Trigger: TGTTCCTATGGTCTGTTTCCAGAGTGGCCAAGTTAC...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAGTTTCGAGGAGATATTaGATATGCAAATCAAATGTC +
Preference number: 4 (lower is better)
Translates to: WLPQCESAPATTAPLSETVSRRY*ICKSNV
Trigger: GACATTTGATTTGCATATCCAATATCTCCTCGAAAC...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAATTCACGGGACAGAACTaGGCCAAAAGGAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQFTGQN*AKRKKT
Trigger: AGTCTTCTTCCTTTTGGCCCAGTTCTGTCCCGTGAA...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGTCTTCTCGGGCAAGCTaGTGTCGAAGGAGAACGTGT +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALSSRAS*CRRRTC
Trigger: ACACGTTCTCCTTCGACATCAGCTTGCCCGAGAAGA...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATCACTGCTCCTTTGAGTaGGACACTGGTTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENHCSFE*DTGCVI
Trigger: GATTACACAACCAGTGTCTCACTCAAAGGAGCAGTG...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTTCATCCCCTATCCATTaGGAGGGAAGATCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGSSPIH*EGRSRK
Trigger: TTTTCTGGATCTTCCCTCTCAATGGATAGGGGATGA...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGCAAATTGTCTTTGTGTaGCCCTATAAGATCCCATCA +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWQIVFV*PYKIPS
Trigger: TGATGGGATCTTATAGGGTCACACAAAGACAATTTG...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGACTCCTCTTCTTGCTTaGCTTAGGAAAACTTCACTT +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWTPLLA*LRKTSL
Trigger: AAGTGAAGTTTTCCTAAGGCAAGCAAGAAGAGGAGT...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGAAGGCAAACCTCTCTTaGCGCAAGGAAGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALKANLS*RKEGAM
Trigger: CATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTT...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATCAGCTTCATCAGCACTaGCATAGGCTTGATTCCCAT +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENQLHQH*HRLDSH
Trigger: ATGGGAATCAAGCCTATGCCAGTGCTGATGAAGCTG...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGCTGTTACCCGATGTCTaGTATGTTTACATAAAACGT +
Preference number: 4 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGLLPDV*YVYIKR
Trigger: ACGTTTTATGTAAACATACCAGACATCGGGTAACAG...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 72 bp AGGCAAGTAGAGTCTTTTATTGGAGAAGAAGGGTCTTaGCGAGCAGGTGAGGACTTGCCTTCTGAACTGTGC +
Preference number: 4 (lower is better)
Translates to: RQVESFIGEEGS*RAGEDLPSELC
Trigger: GCACAGTTCAGAAGGCAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTCCAATAAAAGACTCTACTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGTTCTTGCTGCTCAGCTaGATACAAGGCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALFLLLS*IQGLSG
Trigger: ACCACTGAGGCCTTGTATTCAGCTGAGCAGCAAGAA...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGAACCTTCACAGTGCCTaGAATGGCCTTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALNLHSA*NGLVLE
Trigger: CTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTT...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATAGTACGTCTGTCCATTaGACTCGTAGTACACAGCAA +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENSTSVH*TRSTQQ
Trigger: TTGCTGTGTACTACGAGTGCAATGGACAGACGTACT...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGACTCCTCTTCTTGCTTaGCTTAGGAAAACTTCACTT +
Preference number: 4 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTTPLLA*LRKTSL
Trigger: AAGTGAAGTTTTCCTAAGGCAAGCAAGAAGAGGAGT...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCTGCTGGCTGGGGGCTTaGATCCAGCACCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: NVISPKIITSCHPRVLPTCWLGA*IQHPQQ
Trigger: TTGCTGGGGGTGCTGGATGCAAGCCCCCAGCCAGCA...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGTGGGTTTTGATGACTaGTGTGTTGCTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALVGFDD*CVALCW
Trigger: CCAGCAGAGAGCAACACACCAGTCATCAAAACCCAC...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGCCAAGTCCATGTCCCTaGGTGCTGGTAAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALPSPCP*VLVKCS
Trigger: AGAACACTTTACCAGCACCCAGGGACATGGACTTGG...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTTGTTTACATAAAACGTaGTTCTGCCCAGTAACAGCA +
Preference number: 4 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSCLHKT*FCPVTA
Trigger: TGCTGTTACTGGGCAGAACCACGTTTTATGTAAACA...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGATGAAGATGAGTCCTTaGTTCTACATTCACACTGAA +
Preference number: 4 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWMKMSP*FYIHTE
Trigger: TTCAGTGTGAATGTAGAACCAAGGACTCATCTTCAT...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGACTGGTTGTGTAATCTaGACCTGGCTGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALTGCVI*TWLDLL
Trigger: CAGCAAATCCAGCCAGGTTCAGATTACACAACCAGT...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR TCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACCTGGTCTTGAACGCCTaGCCTCAGGTGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYLVLNA*PQVSCP
Trigger: CGGGCAGCTCACCTGAGGTCAGGCGTTCAAGACCAG...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGAAAGTGCATTTCCCCTTaGACTCTGTGTACAAAAATA +
Preference number: 4 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRKCISP*TLCTKI
Trigger: TATTTTTGTACACAGAGTTCAAGGGGAAATGCACTT...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCAGTAAACACCAATCTTaGCCAAGAAAAATCACAGGT +
Preference number: 4 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLSKHQS*PRKITG
Trigger: ACCTGTGATTTTTCTTGGGCAAGATTGGTGTTTACT...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGAAGTAAACACCAATCTTaGCCAAGAAAAATCACAGGT +
Preference number: 4 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRSKHQS*PRKITG
Trigger: ACCTGTGATTTTTCTTGGGCAAGATTGGTGTTTACT...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACTGCTGGCTGGGGGCTTaGATCCAGCACCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYCWLGA*IQHPQQ
Trigger: TTGCTGGGGGTGCTGGATGCAAGCCCCCAGCCAGCA...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACGAGCCCGCAGGGTTGTaGCAAGCGCGACTACGTGAG +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYEPAGL*QARLRE
Trigger: CTCACGTAGTCGCGCTTGCCACAACCCTGCGGGCTC...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGGTCAGGGCCAGCCCCTaGTTGTCTGCGAAGGACACC +
Preference number: 4 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVVRASP*LSAKDT
Trigger: GGTGTCCTTCGCAGACAACCAGGGGCTGGCCCTGAC...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGTGTGTTGCTCTCTGCTaGAATACATCTGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALCVALC*NTSVGS
Trigger: TGACCCCACAGATGTATTCCAGCAGAGAGCAACACA...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACGCATCCCAGGTGTGCTaGCTGGGGGCTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYASQVC*LGACIQ
Trigger: CTGGATGCAAGCCCCCAGCCAGCACACCTGGGATGC...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATCACGGCTTTACAATGTaGGTTACAGAGCTTTACAAC +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENHGFTM*VTELYN
Trigger: GTTGTAAAGCTCTGTAACCCACATTGTAAAGCCGTG...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCGAACCCTGCAATCTGTaGCACCGCACAGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIEPCNL*HRTGAS
Trigger: ACTGGCTCCTGTGCGGTGTCACAGATTGCAGGGTTC...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGCAAGTCAAGGTGCAGTaGAGTCTCCAAGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALQVKVQ*SLQVRN
Trigger: GTTTCTTACTTGGAGACTTCACTGCACCTTGACTTG...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAGTAAAATTCAGGACCTaGATGAAATCAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LLEYICGVKKREEEMPVSVKFRT*MKSVLL
Trigger: AAGCAAAACTGATTTCATGCAGGTCCTGAATTTTAC...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGTTATTGTACCCAGTTTaGAAATGCTCCTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALLLYPV*KCSSGH
Trigger: GTGCCCTGAGGAGCATTTGCAAACTGGGTACAATAA...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGTAACTTGGCCACTCTaGAAACAGACCATAGGAACA +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALVTWPL*KQTIGT
Trigger: TGTTCCTATGGTCTGTTTCCAGAGTGGCCAAGTTAC...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCCAGCAGAGATACACGTaGACGGGGAAGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIQQRYT*TGKHSS
Trigger: GCTGCTGTGCTTCCCCGTCCACGTGTATCTCTGCTG...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCGAGCAGGTGAGGACTTaGCTTCTGAACTGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIEQVRT*LLNCAA
Trigger: TGCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTC...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCTTCACCTTCTTCTCCTaGACAGCCGGGGCCACCATT +
Preference number: 4 (lower is better)
Translates to: NVISPKIITSCHPRVLPTFTFFS*TAGATI
Trigger: AATGGTGGCCCCGGCTGTCCAGGAGAAGAAGGTGAA...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCGGGCTGAGTGGCTTTTaGCGACTGATGTCCCACATC +
Preference number: 4 (lower is better)
Translates to: NVISPKIITSCHPRVLPTGLSGF*RLMSHI
Trigger: GATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCC...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCGCCTCTCCTGCATTGTaGGGAGGGCACTTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: NVISPKIITSCHPRVLPTASPAL*GGHFLR
Trigger: CCTTAAGAAGTGCCCTCCCCACAATGCAGGAGAGGC...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGCACGGCTTTACAATGTaGGTTACAGAGCTTTACAAC +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALHGFTM*VTELYN
Trigger: GTTGTAAAGCTCTGTAACCCACATTGTAAAGCCGTG...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 72 bp TGTGACCCTATAAGATCCCATCATCCATGTAACTTCTaGTCTCCGATTTCAGTGAACATGTCAGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: CDPIRSHHPCNF*SPISVNMSGET
Trigger: CGTCTCTCCTGACATGTTCACTGAAATCGGAGACAAGAAGTTACATGGATGATGGGATCTTATAGGGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGTTCTTTCATAAAGAATaGGACAAACCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: HELAENKSQSHFSSAAALFFHKE*DKPAKH
Trigger: GTGCTTGGCTGGTTTGTCTCATTCTTTATGAAAGAA...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR GCA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATGTAAAATTCAGGACCTaGATGAAATCAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: AIKQGENTSAQLPRPSENVKFRT*MKSVLL
Trigger: AAGCAAAACTGATTTCATGCAGGTCCTGAATTTTAC...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCGGTGGCTGGTCTTTCTaGGGCAACCTGGGAAAGATT +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIGGWSF*GNLGKI
Trigger: AATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACC...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACTGCACCTGTGACAGGTaGCTGGTCTTTCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYCTCDR*LVFLGQ
Trigger: TTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCCAGACGTGGTCGGCCTaGAGTCGATTTCTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: NVISPKIITSCHPRVLPTQTWSA*SRFLKS
Trigger: AGACTTTAGAAATCGACTTCAGGCCGACCACGTCTG...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCTCCACTGCACAGTaGGCAGAGCTAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVISTAQ*AELGLS
Trigger: AGACAAGCCTAGCTCTGCTCACTGTGCAGTGGAGAT...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGACCCCCATACATCACTaGATGACAGCCCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVTPIHH*MTALMR
Trigger: CCTCATCAGGGCTGTCATTCAGTGATGTATGGGGGT...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACAGGAAGAAGACTGTTTaGGGCAGGAGGGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYRKKTV*GRRVAE
Trigger: CTCTGCTACCCTCCTGCCGCAAACAGTCTTCTTCCT...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCAAGTTGCTTCCCTATTaGCGGACAACTGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIKLLPY*RTTAPV
Trigger: CACAGGTGCAGTTGTCCGGCAATAGGGAAGCAACTT...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACGCTGGAATACATCTGTaGGGTCAAGAAGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYAGIHL*GQEAGG
Trigger: TCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGC...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACCAGACGTGGTCGGCCTaGAGTCGATTTCTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYQTWSA*SRFLKS
Trigger: AGACTTTAGAAATCGACTTCAGGCCGACCACGTCTG...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGTCAAATGCGAGGTTCTaGACCTTCACAGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVSNARF*TFTVPA
Trigger: TGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGA...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCTGTCTCCGATTTCAGTaGACATGTCAGGAGAGACGT +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVICLRFQ*TCQERR
Trigger: ACGTCTCTCCTGACATGTTCACTGAAATCGGAGACA...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGTGGATTACAGGCGCCTaGCACCACACTCAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVWITGA*HHTQLN
Trigger: ATTTAGCTGAGTGTGGTGGCAGGCGCCTGTAATCCA...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACTTAACTCAGCCCGGATaGTCCTATAGTTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: NKALDFRLRTASFRSKNYLTQPG*SYSSCL
Trigger: GAGGCAAGAACTATAGGATCATCCGGGCTGAGTTAA...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCCACTGGCTTCATTCTTaGTGCTCAGCTGAATACAAG +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIHWLHS*CSAEYK
Trigger: CTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTG...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR GCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCTTATTGTACCCAGTTTaGAAATGCTCCTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVILLYPV*KCSSGH
Trigger: GTGCCCTGAGGAGCATTTGCAAACTGGGTACAATAA...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR TCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCCAAATTGTCTTTGTGTaGCCCTATAAGATCCCATCA +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIQIVFV*PYKIPS
Trigger: TGATGGGATCTTATAGGGTCACACAAAGACAATTTG...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGTGTTTACATAAAACGTaGTTCTGCCCAGTAACAGCA +
Preference number: 4 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVCLHKT*FCPVTA
Trigger: TGCTGTTACTGGGCAGAACCACGTTTTATGTAAACA...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CCA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCGTTTCGAGGAGATATTaGATATGCAAATCAAATGTC +
Preference number: 4 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIVSRRY*ICKSNV
Trigger: GACATTTGATTTGCATATCCAATATCTCCTCGAAAC...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
3UTR CAA 72 bp ACGATAAAACCATTTTCTGAAGGTTTCGAGGAGATATaGGATATGCAAATCAAATGTCCTAAACACAGCAGA +
Preference number: 4 (lower is better)
Translates to: TIKPFSEGFEEI*DMQIKCPKHSR
Trigger: TCTGCTGTGTTTAGGACATTTGATTTGCATATCCAATATCTCCTCGAAACCTTCAGAAAATGGTTTTATCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTGGAGAGCCCGCAGGGTaGTGGCAAGCGCGACTACGT +
Preference number: 5 (lower is better)
Translates to: HRLSWLPQCESAPATTAPGEPAG*WQARLR
Trigger: ACGTAGTCGCGCTTGCCACAACCCTGCGGGCTCTCC...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCGGTCCACTGTGGGGCTaGGTCATTCCCTGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: RAQTLVAATVRKRASHHCGPLWG*VIPWVD
Trigger: ATCTACCCAGGGAATGACCAAGCCCCACAGTGGACC...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTGGTCCACTGTGGGGCTaGGTCATTCCCTGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: HRLSWLPQCESAPATTAPGPLWG*VIPWVD
Trigger: ATCTACCCAGGGAATGACCAAGCCCCACAGTGGACC...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGGGTGAGCTGCCCGCCTaGGCTTCCCAAAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQGELPA*ASQSAG
Trigger: CCCTGCACTTTGGGAAGCCAAGGCGGGCAGCTCACC...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTCATGGAAGTTCCACGTaGCTCCTCCCTGGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: RFTVSSASQVPAILLPQPHGSST*LLPGLP
Trigger: TGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATG...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCAAGGAAGAAGACTGTTaGCGGCAGGAGGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: RAQTLVAATVRKRASHHCKEEDC*RQEGSR
Trigger: TCTGCTACCCTCCTGCCGCAAACAGTCTTCTTCCTT...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTCAAGGCCTCAGTGGTTaGCTGGGCTTTGGTGAGATC +
Preference number: 5 (lower is better)
Translates to: RFTVSSASQVPAILLPQPQGLSG*LGFGEI
Trigger: GATCTCACCAAAGCCCAGCAAACCACTGAGGCCTTG...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTAGGAGCTCGGTGATGTaGAATGGCATATCTAGCGGG +
Preference number: 5 (lower is better)
Translates to: HRLSWLPQCESAPATTAPRSSVM*NGISSG
Trigger: CCCGCTAGATATGCCATTCAACATCACCGAGCTCCT...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGGGTCCACTGTGGGGCTaGGTCATTCCCTGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: SRFTVSSASQVPAILLPQGPLWG*VIPWVD
Trigger: ATCTACCCAGGGAATGACCAAGCCCCACAGTGGACC...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGAGGAGAGCCCGCAGGGTaGTGGCAAGCGCGACTACGT +
Preference number: 5 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRGEPAG*WQARLR
Trigger: ACGTAGTCGCGCTTGCCACAACCCTGCGGGCTCTCC...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCAAGGCCTCAGTGGTTaGCTGGGCTTTGGTGAGATC +
Preference number: 5 (lower is better)
Translates to: SRFTVSSASQVPAILLPQQGLSG*LGFGEI
Trigger: GATCTCACCAAAGCCCAGCAAACCACTGAGGCCTTG...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCAATGGCCTTGTCCTaGAGCACACAGTTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPAMALS*STQFSR
Trigger: CCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTGC...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGCCTGCAATGGCCTTGTCCTaGAGCACACAGTTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: RFTVSSASQVPAILLPQPAMALS*STQFSR
Trigger: CCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTGC...AGGCTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTGCAATGGCCTTGTCCTaGAGCACACAGTTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLAMALS*STQFSR
Trigger: CCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTGC...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCGCCACCACTGCTCCTTaGAGTGAGACACTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAATTAP*SETLVV
Trigger: CACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGGC...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTAGGAGCCAGTGGGTTTaGATGACTGGTGTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLRSQWV*MTGVLL
Trigger: GAGCAACACACCAGTCATCAAAACCCACTGGCTCCT...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTCTTGACTGTCCTGCCTaGTCAGAACCCTGCAATCTG +
Preference number: 5 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLLDCPA*SEPCNL
Trigger: CAGATTGCAGGGTTCTGACAAGGCAGGACAGTCAAG...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGTGTGCCTCTCCTGCATaGTGGGGAGGGCACTTCTTA +
Preference number: 5 (lower is better)
Translates to: SRFTVSSASQVPAILLPQCASPA*WGGHFL
Trigger: TAAGAAGTGCCCTCCCCACAATGCAGGAGAGGCACA...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGGGAGAAGAAGGGTCTTaGCGAGCAGGTGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: SRFTVSSASQVPAILLPQGEEGS*RAGEDL
Trigger: CAAGTCCTCACCTGCTCGCAAAGACCCTTCTTCTCC...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS CCA 90 bp CCCTGGTTGTCTGCGAAGGACACCCGCTTTTTCACCTTCTTCTCCTaGACAGCCGGGGCCACCATTCCACTGGCTTCATTCTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PWLSAKDTRFFTFFS*TAGATIPLASFLLL
Trigger: GAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCCCGGCTGTCCAGGAGAAGAAGGTGAAAAAGCGGGTGTCCTTCGCAGACAACCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp ACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTGAAGGAGCCATGCAGTaGTATCTGTACTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: TDSRGCHSAKARQPPLLLEGAMQ*YLYSMS
Trigger: GGACATCGAGTACAGATACAACTGCATGGCTCCTTC...AAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGAAAGGCAAACCTCTCTaGGCGCAAGGAAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: SRFTVSSASQVPAILLPQKGKPL*AQGRSH
Trigger: ATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTTT...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGCAAGGCCTCAGTGGTTaGCTGGGCTTTGGTGAGATC +
Preference number: 5 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQQGLSG*LGFGEI
Trigger: GATCTCACCAAAGCCCAGCAAACCACTGAGGCCTTG...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAAATTCCGAGAACACTTaGACCATTGTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSTDVHRLSWLPQCESAPNSENT*TIVRAS
Trigger: GCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAATT...TGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTCATGGAAGTTCCACGTaGCTCCTCCCTGGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSHGSST*LLPGLP
Trigger: TGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATG...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGCATGGAAGTTCCACGTaGCTCCTCCCTGGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGHGSST*LLPGLP
Trigger: TGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATG...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCAAGGAAGAAGACTGTTaGCGGCAGGAGGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: VISVHCKLRLPGSRHSPAKEEDC*RQEGSR
Trigger: TCTGCTACCCTCCTGCCGCAAACAGTCTTCTTCCTT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGGAAGTTGCTTCCCTATaGCCGGACAACTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: SRFTVSSASQVPAILLPQEVASL*PDNCTC
Trigger: ACAGGTGCAGTTGTCCGGCAATAGGGAAGCAACTTC...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS GCA 90 bp TCTCCTGGACAGCCGGGGCCACCATTCCACTGGCTTCATTCTTGCTaGTCAGCTGAATACAAGGCCTCAGTGGTTTGCTGGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: SPGQPGPPFHWLHSC*SAEYKASVVCWALV
Trigger: CACCAAAGCCCAGCAAACCACTGAGGCCTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCCCGGCTGTCCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAGGAGCTCGGTGATGTaGAATGGCATATCTAGCGGG +
Preference number: 5 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPRSSVM*NGISSG
Trigger: CCCGCTAGATATGCCATTCAACATCACCGAGCTCCT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTTTGAGTGAGACAGTCAAGCTCACAATGTaGTCTAGGAGCTCGGTGATG +
Preference number: 5 (lower is better)
Translates to: WLPQCESAPATTAPLSETVKLTM*SRSSVM
Trigger: CATCACCGAGCTCCTAGACAACATTGTGAGCTTGAC...TGTCTCACTCAAAGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAGGAGCCAGTGGGTTTaGATGACTGGTGTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPRSQWV*MTGVLL
Trigger: GAGCAACACACCAGTCATCAAAACCCACTGGCTCCT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCACTTGACTGTCCTGCCTaGTCAGAACCCTGCAATCTG +
Preference number: 5 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPLDCPA*SEPCNL
Trigger: CAGATTGCAGGGTTCTGACAAGGCAGGACAGTCAAG...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GCTGGGGCTGAGTGGCTTTTGGCGACTGATGTCCCACATCTGAGTGGAGAGCAGAAAGTGTCCCCACTCTaGACTGTCCTGCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: AGAEWLLATDVPHLSGEQKVSPL*TVLPCQ
Trigger: CTGACAAGGCAGGACAGTCAAGAGTGGGGACACTTT...CTGCTCTCCACTCAGATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CGTGCACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCAGCACGTTAAAGTCATaGAGCTTTCGGGGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: RAQTLVAATVRKRASHHCSTLKS*SFRGKN
Trigger: ATTTTTCCCCCGAAAGCTCAATGACTTTAACGTGCT...GCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CACAGACTCTCGTGGCTGCCACAGTGCGAAAGCGCGCCAGCCACCACTGCTCCTCACAAGACTCTTAGCTaGAAAAGCCTGACAACTCTG +
Preference number: 5 (lower is better)
Translates to: HRLSWLPQCESAPATTAPHKTLS*KSLTTL
Trigger: CAGAGTTGTCAGGCTTTTCAAGCTAAGAGTCTTGTG...AGGAGCAGTGGTGGCTGGCGCGCTTTCGCACTGTGGCAGCCACGAGAGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGACGAGCAGGTGAGGACTaGCCTTCTGAACTGTGCGGC +
Preference number: 5 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRRAGED*PSELCG
Trigger: GCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTCG...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAATTCCGAGAACACTTaGACCATTGTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPNSENT*TIVRAS
Trigger: GCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAATT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGTCCACTGTGGGGCTaGGTCATTCCCTGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGGPLWG*VIPWVD
Trigger: ATCTACCCAGGGAATGACCAAGCCCCACAGTGGACC...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACCATGGAAGTTCCACGTaGCTCCTCCCTGGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHHGSST*LLPGLP
Trigger: TGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATG...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACGGGGCTGAGTGGCTTTaGGCGACTGATGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHGAEWL*ATDVPH
Trigger: ATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCC...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACGAGCAGGTGAGGACTaGCCTTCTGAACTGTGCGGC +
Preference number: 5 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQRAGED*PSELCG
Trigger: GCCGCACAGTTCAGAAGGCAAGTCCTCACCTGCTCG...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS TCA 90 bp ATGCGAGGTTCTGAACCTTCACAGTGCCTGCAATGGCCTTGTCCTTaGGCACACAGTTCTCAAGGCAGACGTGGTCGGCCTGAAGTCGAT +
Preference number: 5 (lower is better)
Translates to: MRGSEPSQCLQWPCP*AHSSQGRRGRPEVD
Trigger: ATCGACTTCAGGCCGACCACGTCTGCCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGAACCTCGCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTCAAGGCCTCAGTGGTTaGCTGGGCTTTGGTGAGATC +
Preference number: 5 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGQGLSG*LGFGEI
Trigger: GATCTCACCAAAGCCCAGCAAACCACTGAGGCCTTG...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGGCCACCACTGCTCCTTaGAGTGAGACACTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTATTAP*SETLVV
Trigger: CACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGGC...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAGCCACCACTGCTCCTTaGAGTGAGACACTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LLEYICGVKKREEEMPVSATTAP*SETLVV
Trigger: CACAACCAGTGTCTCACTCAAAGGAGCAGTGGTGGC...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTAGCACTGGCATAGGCTaGATTCCCATCCATACCCTT +
Preference number: 5 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSSTGIG*IPIHTL
Trigger: AAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTTGATGACTGGTGTGTaGCTCTCTGCTGGAATACAT +
Preference number: 5 (lower is better)
Translates to: VISVHCKLRLPGSRHSPALMTGV*LSAGIH
Trigger: ATGTATTCCAGCAGAGAGCAACACACCAGTCATCAA...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCCTCAGTATCTGCCTGTaGGTTATGTACAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: VISVHCKLRLPGSRHSPALSICL*VMYKAT
Trigger: TGTGGCTTTGTACATAACCAACAGGCAGATACTGAG...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTGTGCCTCTCCTGCATaGTGGGGAGGGCACTTCTTA +
Preference number: 5 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLCASPA*WGGHFL
Trigger: TAAGAAGTGCCCTCCCCACAATGCAGGAGAGGCACA...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS TCA 90 bp ACAGCCGGGGCCACCATTCCACTGGCTTCATTCTTGCTGCTCAGCTaGATACAAGGCCTCAGTGGTTTGCTGGGCTTTGGTGAGATCTTA +
Preference number: 5 (lower is better)
Translates to: TAGATIPLASFLLLS*IQGLSGLLGFGEIL
Trigger: TAAGATCTCACCAAAGCCCAGCAAACCACTGAGGCCTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCCCGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CCA 90 bp GCTTTTTCACCTTCTTCTCCTGGACAGCCGGGGCCACCATTCCACTaGCTTCATTCTTGCTGCTCAGCTGAATACAAGGCCTCAGTGGTT +
Preference number: 5 (lower is better)
Translates to: AFSPSSPGQPGPPFH*LHSCCSAEYKASVV
Trigger: AACCACTGAGGCCTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCCCGGCTGTCCAGGAGAAGAAGGTGAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CCA 90 bp GGGCTTCCGAACTGGTCAAAGGATATTCCCAAATCCGGTCCACTGTaGGGCTTGGTCATTCCCTGGGTAGATTTTAACTCAGCCCGGATG +
Preference number: 5 (lower is better)
Translates to: GLPNWSKDIPKSGPL*GLVIPWVDFNSARM
Trigger: CATCCGGGCTGAGTTAAAATCTACCCAGGGAATGACCAAGCCCCACAGTGGACCGGATTTGGGAATATCCTTTGACCAGTTCGGAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGAAAGGCAAACCTCTCTaGGCGCAAGGAAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTKGKPL*AQGRSH
Trigger: ATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTTT...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGCTGGAATTCCGAGAACACTTaGACCATTGTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: EHPKMNTMNSEGLTRGGWNSENT*TIVRAS
Trigger: GCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAATT...CCAGCCACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTAGGAGCTCGGTGATGTaGAATGGCATATCTAGCGGG +
Preference number: 5 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSRSSVM*NGISSG
Trigger: CCCGCTAGATATGCCATTCAACATCACCGAGCTCCT...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGGAGCTCGGTGATGTaGAATGGCATATCTAGCGGG +
Preference number: 5 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHRSSVM*NGISSG
Trigger: CCCGCTAGATATGCCATTCAACATCACCGAGCTCCT...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CTGGCTGGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGGCAATGGCCTTGTCCTaGAGCACACAGTTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: LAGREHPKMNTMNSEGLTAMALS*STQFSR
Trigger: CCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTGC...CGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCACATATCCTAAGTAACTaGGCCACTCTGGAAACAGAC +
Preference number: 5 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPHILSN*ATLETD
Trigger: GTCTGTTTCCAGAGTGGCCAAGTTACTTAGGATATG...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GCTATCAAACAAGGAGAGAATACATCAGCGCAGCTCCCGAGGCCTTCTGAGAATGGGGCTGAGTGGCTTTaGGCGACTGATGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: AIKQGENTSAQLPRPSENGAEWL*ATDVPH
Trigger: ATGTGGGACATCAGTCGCCAAAAGCCACTCAGCCCC...ATTCTCAGAAGGCCTCGGGAGCTGCGCTGATGTATTCTCTCCTTGTTTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTCTTGACTGTCCTGCCTaGTCAGAACCCTGCAATCTG +
Preference number: 5 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSLDCPA*SEPCNL
Trigger: CAGATTGCAGGGTTCTGACAAGGCAGGACAGTCAAG...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCAAAGTGTCCCCACTCTaGACTGTCCTGCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLKVSPL*TVLPCQ
Trigger: CTGACAAGGCAGGACAGTCAAGAGTGGGGACACTTT...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTAAAGTGTCCCCACTCTaGACTGTCCTGCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGKVSPL*TVLPCQ
Trigger: CTGACAAGGCAGGACAGTCAAGAGTGGGGACACTTT...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCAGCACGTTAAAGTCATaGAGCTTTCGGGGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: VISVHCKLRLPGSRHSPASTLKS*SFRGKN
Trigger: ATTTTTCCCCCGAAAGCTCAATGACTTTAACGTGCT...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACGAAGTTGCTTCCCTATaGCCGGACAACTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHEVASL*PDNCTC
Trigger: ACAGGTGCAGTTGTCCGGCAATAGGGAAGCAACTTC...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS TCA 90 bp GCTGCTCAGCTGAATACAAGGCCTCAGTGGTTTGCTGGGCTTTGGTaGGATCTTAAAGGCAAACCTCTCTTGGCGCAAGGAAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: AAQLNTRPQWFAGLW*DLKGKPLLAQGRSH
Trigger: ATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTTTAAGATCTCACCAAAGCCCAGCAAACCACTGAGGCCTTGTATTCAGCTGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAGAAGGAGCCATGCAGTaGTATCTGTACTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: LLEYICGVKKREEEMPVSEGAMQ*YLYSMS
Trigger: GGACATCGAGTACAGATACAACTGCATGGCTCCTTC...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTCATATCCTAAGTAACTaGGCCACTCTGGAAACAGAC +
Preference number: 5 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSHILSN*ATLETD
Trigger: GTCTGTTTCCAGAGTGGCCAAGTTACTTAGGATATG...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGCACTGGCATAGGCTaGATTCCCATCCATACCCTT +
Preference number: 5 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHSTGIG*IPIHTL
Trigger: AAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TGCACCTGTGACAGGTGGCTGGTCTTTCTGGGGCAACCTGGGAAAGATTCTGGGTTGATGACTGGTGTGTaGCTCTCTGCTGGAATACAT +
Preference number: 5 (lower is better)
Translates to: CTCDRWLVFLGQPGKDSGLMTGV*LSAGIH
Trigger: ATGTATTCCAGCAGAGAGCAACACACCAGTCATCAA...CCCAGAATCTTTCCCAGGTTGCCCCAGAAAGACCAGCCACCTGTCACAGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGCTGCCACAGTTTGATGACTGGTGTGTaGCTCTCTGCTGGAATACAT +
Preference number: 5 (lower is better)
Translates to: PSIPFPAQTCTDSRGCHSLMTGV*LSAGIH
Trigger: ATGTATTCCAGCAGAGAGCAACACACCAGTCATCAA...ACTGTGGCAGCCACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACTTGACTGTCCTGCCTaGTCAGAACCCTGCAATCTG +
Preference number: 5 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQLDCPA*SEPCNL
Trigger: CAGATTGCAGGGTTCTGACAAGGCAGGACAGTCAAG...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCACATCCATGTAACTTCTaGTCTCCGATTTCAGTGAAC +
Preference number: 5 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPHPCNF*SPISVN
Trigger: GTTCACTGAAATCGGAGACAAGAAGTTACATGGATG...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS GCA 90 bp TTTCACGGTCTTCTCAAATGCGAGGTTCTGAACCTTCACAGTGCCTaGAATGGCCTTGTCCTTGAGCACACAGTTCTCAAGGCAGACGTG +
Preference number: 5 (lower is better)
Translates to: FHGLLKCEVLNLHSA*NGLVLEHTVLKADV
Trigger: CACGTCTGCCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGAGAAGACCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAAGCACTGGCATAGGCTaGATTCCCATCCATACCCTT +
Preference number: 5 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQSTGIG*IPIHTL
Trigger: AAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp GTGATCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTGCATGAAATCAGTTTaGCTTCCATTTGAGTTCGAT +
Preference number: 5 (lower is better)
Translates to: VISVHCKLRLPGSRHSPACMKSV*LPFEFD
Trigger: ATCGAACTCAAATGGAAGCAAAACTGATTTCATGCA...GGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGAATCCAGCTTATTTATaGTACCCAGTTTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: SRFTVSSASQVPAILLPQNPAYL*YPVCKC
Trigger: GCATTTGCAAACTGGGTACAATAAATAAGCTGGATT...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTCGGTTCACTGTAAGCTCCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGAAAGTGCATTTCCCCTaGAACTCTGTGTACAAAAAT +
Preference number: 5 (lower is better)
Translates to: SRFTVSSASQVPAILLPQKVHFP*NSVYKN
Trigger: ATTTTTGTACACAGAGTTCAAGGGGAAATGCACTTT...CTGAGGCAGGAGAATGGCGGGAACCTGGGAGGCGGAGCTTACAGTGAACCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS TCA 90 bp AATCTTCTCGGGCAAGCTGATGTCGAAGGAGAACGTGTCCCTGTCTaGACCGGCATAAGTGTCCTTCACGTACTGACAAGGAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: NLLGQADVEGERVPV*TGISVLHVLTRKVC
Trigger: ACAGACTTTCCTTGTCAGTACGTGAAGGACACTTATGCCGGTTCAGACAGGGACACGTTCTCCTTCGACATCAGCTTGCCCGAGAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGATTGATGACTGGTGTGTaGCTCTCTGCTGGAATACAT +
Preference number: 5 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRLMTGV*LSAGIH
Trigger: ATGTATTCCAGCAGAGAGCAACACACCAGTCATCAA...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCACTGGCATAGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACCACAAGACTCTTAGCTaGAAAAGCCTGACAACTCTG +
Preference number: 5 (lower is better)
Translates to: STGIGLIPIHTLSSTDVHHKTLS*KSLTTL
Trigger: CAGAGTTGTCAGGCTTTTCAAGCTAAGAGTCTTGTG...GTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCTATGCCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCATGCATGAAATCAGTTTaGCTTCCATTTGAGTTCGAT +
Preference number: 5 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPCMKSV*LPFEFD
Trigger: ATCGAACTCAAATGGAAGCAAAACTGATTTCATGCA...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGATTTATTGTACCCAGTTaGCAAATGCTCCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRFIVPS*QMLLRA
Trigger: TGCCCTGAGGAGCATTTGCAAACTGGGTACAATAAA...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CAAACGGGGCCTCATGGAAGTTCCACGTTGCTCCTCCCTGGCCTTCCATCTCCAAATCCAGCTTATTTATaGTACCCAGTTTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: QTGPHGSSTLLLPGLPSPNPAYL*YPVCKC
Trigger: GCATTTGCAAACTGGGTACAATAAATAAGCTGGATT...TGGAGATGGAAGGCCAGGGAGGAGCAACGTGGAACTTCCATGAGGCCCCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS TCA 90 bp TCGAACGTCATCCTTATTTTCACGGTCTTCTCAAATGCGAGGTTCTaGACCTTCACAGTGCCTGCAATGGCCTTGTCCTTGAGCACACAG +
Preference number: 5 (lower is better)
Translates to: SNVILIFTVFSNARF*TFTVPAMALSLSTQ
Trigger: CTGTGTGCTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGAGAAGACCGTGAAAATAAGGATGACGTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS GCA 90 bp CTTCCAGGTGTCGAACGTCATCCTTATTTTCACGGTCTTCTCAAATaGGAGGTTCTGAACCTTCACAGTGCCTGCAATGGCCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LPGVERHPYFHGLLK*EVLNLHSACNGLVL
Trigger: AAGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGAGAAGACCGTGAAAATAAGGATGACGTTCGACACCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAACATATCCTAAGTAACTaGGCCACTCTGGAAACAGAC +
Preference number: 5 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQHILSN*ATLETD
Trigger: GTCTGTTTCCAGAGTGGCCAAGTTACTTAGGATATG...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp TCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCTCTAGCACGTTAAAGTCATaGAGCTTTCGGGGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: SVTPHRSQWVLMTGVLLSSTLKS*SFRGKN
Trigger: ATTTTTCCCCCGAAAGCTCAATGACTTTAACGTGCT...AGAGAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AGCTCCCGAGGCCTTCTGAGAATTTCACGGGACAGAACTGGGCCAAAAGGAAGAATAACGTATAAGAACTaGGGTGAGGTTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: SSRGLLRISRDRTGPKGRITYKN*GEVFLP
Trigger: GGGGAGAAAAACCTCACCCAAGTTCTTATACGTTAT...TCTTCCTTTTGGCCCAGTTCTGTCCCGTGAAATTCTCAGAAGGCCTCGGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CAATCTGTGACACCGCACAGGAGCCAGTGGGTTTTGATGACTGGTGTGTTGCTCATAACGTATAAGAACTaGGGTGAGGTTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: QSVTPHRSQWVLMTGVLLITYKN*GEVFLP
Trigger: GGGGAGAAAAACCTCACCCAAGTTCTTATACGTTAT...GAGCAACACACCAGTCATCAAAACCCACTGGCTCCTGTGCGGTGTCACAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGAAGTCTCTCTTTTTaGAGACAGTTTCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGGSLSF*RQFHSV
Trigger: GACAGAGTGAAACTGTCTCAAAAAAGAGAGACTTCC...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp TGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAGCTGCCAAATTGTCTTaGTGTGACCCTATAAGATCC +
Preference number: 5 (lower is better)
Translates to: CWNTSVGSRSGRRKCLSQAAKLS*CDPIRS
Trigger: GGATCTTATAGGGTCACACAAAGACAATTTGGCAGC...TTGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTCCAGTTCCACATGTGTaGTCTCACTGCAGGAAATTA +
Preference number: 5 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGPVPHV*SHCRKL
Trigger: TAATTTCCTGCAGTGAGACAACACATGTGGAACTGG...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS TCA 90 bp CAGCAAACTCCATTCTTTCATAAGACTGAATCTTCTCGGGCAAGCTaGTGTCGAAGGAGAACGTGTCCCTGTCTGAACCGGCATAAGTGT +
Preference number: 5 (lower is better)
Translates to: QQTPFFHKTESSRAS*CRRRTCPCLNRHKC
Trigger: ACACTTATGCCGGTTCAGACAGGGACACGTTCTCCTTCGACATCAGCTTGCCCGAGAAGATTCAGTCTTATGAAAGAATGGAGTTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGAAGGAGCCATGCAGTaGTATCTGTACTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: HELAENKSQSHFSSAAALEGAMQ*YLYSMS
Trigger: GGACATCGAGTACAGATACAACTGCATGGCTCCTTC...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGAATTCCGAGAACACTTaGACCATTGTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HELAENKSQSHFSSAAALNSENT*TIVRAS
Trigger: GCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAATT...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGTCAAGCTCACAATGTaGTCTAGGAGCTCGGTGATG +
Preference number: 5 (lower is better)
Translates to: HELAENKSQSHFSSAAALVKLTM*SRSSVM
Trigger: CATCACCGAGCTCCTAGACAACATTGTGAGCTTGAC...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACGGTGAGCTGCCCGCCTaGGCTTCCCAAAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: NKALDFRLRTASFRSKNYGELPA*ASQSAG
Trigger: CCCTGCACTTTGGGAAGCCAAGGCGGGCAGCTCACC...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AGTGAACATGTCAGGAGAGACGTGATCGGGACTCTCCCAGGACTACATTCAGGTCATCCATGTAACTTCTaGTCTCCGATTTCAGTGAAC +
Preference number: 5 (lower is better)
Translates to: SEHVRRDVIGTLPGLHSGHPCNF*SPISVN
Trigger: GTTCACTGAAATCGGAGACAAGAAGTTACATGGATG...ACCTGAATGTAGTCCTGGGAGAGTCCCGATCACGTCTCTCCTGACATGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp GGCAGAGAGCACCCAAAGATGAACACAATGAACAGTGAGGGTCTCACGCGAGGTGGTTTCGAGGAGATATaGGATATGCAAATCAAATGT +
Preference number: 5 (lower is better)
Translates to: GREHPKMNTMNSEGLTRGGFEEI*DMQIKC
Trigger: ACATTTGATTTGCATATCCAATATCTCCTCGAAACC...ACCTCGCGTGAGACCCTCACTGTTCATTGTGTTCATCTTTGGGTGCTCTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AGGCTTGATTCCCATCCATACCCTTTCCAGCACAGACGTGCACAGACTCTCGTGGGTTTCGAGGAGATATaGGATATGCAAATCAAATGT +
Preference number: 5 (lower is better)
Translates to: RLDSHPYPFQHRRAQTLVGFEEI*DMQIKC
Trigger: ACATTTGATTTGCATATCCAATATCTCCTCGAAACC...CACGAGAGTCTGTGCACGTCTGTGCTGGAAAGGGTATGGATGGGAATCAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CTGCTGGAATACATCTGTGGGGTCAAGAAGCGGGAGGAGGAAATGCCTGTCTCAAAAGTGCATTTCCCCTaGAACTCTGTGTACAAAAAT +
Preference number: 5 (lower is better)
Translates to: LLEYICGVKKREEEMPVSKVHFP*NSVYKN
Trigger: ATTTTTGTACACAGAGTTCAAGGGGAAATGCACTTT...TGAGACAGGCATTTCCTCCTCCCGCTTCTTGACCCCACAGATGTATTCCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS GCA 90 bp TCCTATAGTTCTTGCCTCTGTTGCTGTCCCAGTACGTCTGTCCATTaGACTCGTAGTACACAGCAAACTCCATTCTTTCATAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: SYSSCLCCCPSTSVH*TRSTQQTPFFHKTE
Trigger: TTCAGTCTTATGAAAGAATGGAGTTTGCTGTGTACTACGAGTGCAATGGACAGACGTACTGGGACAGCAACAGAGGCAAGAACTATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS-3UTR CAA 90 bp CATGAACTTGCAGAAAACAAGAGCCAATCCCATTTCTCTTCTGCAGCTGCACTGGGAAGTCTCTCTTTTTaGAGACAGTTTCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: HELAENKSQSHFSSAAALGSLSF*RQFHSV
Trigger: GACAGAGTGAAACTGTCTCAAAAAAGAGAGACTTCC...CAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAGTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACAAAGGCAAACCTCTCTaGGCGCAAGGAAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: NKALDFRLRTASFRSKNYKGKPL*AQGRSH
Trigger: ATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTTT...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCGTCAAGCTCACAATGTaGTCTAGGAGCTCGGTGATG +
Preference number: 5 (lower is better)
Translates to: NVISPKIITSCHPRVLPTVKLTM*SRSSVM
Trigger: CATCACCGAGCTCCTAGACAACATTGTGAGCTTGAC...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACAGGAGCCAGTGGGTTTaGATGACTGGTGTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: NKALDFRLRTASFRSKNYRSQWV*MTGVLL
Trigger: GAGCAACACACCAGTCATCAAAACCCACTGGCTCCT...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGAAAGTGTCCCCACTCTaGACTGTCCTGCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVKVSPL*TVLPCQ
Trigger: CTGACAAGGCAGGACAGTCAAGAGTGGGGACACTTT...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AACAAAGCATTAGATTTCAGGCTAAGAACAGCCAGTTTTAGGAGTAAGAATTACGTCAAGCTCACAATGTaGTCTAGGAGCTCGGTGATG +
Preference number: 5 (lower is better)
Translates to: NKALDFRLRTASFRSKNYVKLTM*SRSSVM
Trigger: CATCACCGAGCTCCTAGACAACATTGTGAGCTTGAC...GTAATTCTTACTCCTAAAACTGGCTGTTCTTAGCCTGAAATCTAATGCTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCTTTATTGTACCCAGTTaGCAAATGCTCCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: NVISPKIITSCHPRVLPTFIVPS*QMLLRA
Trigger: TGCCCTGAGGAGCATTTGCAAACTGGGTACAATAAA...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp CTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGATCGCTGCCAAATTGTCTTaGTGTGACCCTATAAGATCC +
Preference number: 5 (lower is better)
Translates to: LTLLNRVTSGLFLMNRVIAAKLS*CDPIRS
Trigger: GGATCTTATAGGGTCACACAAAGACAATTTGGCAGC...GATCACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AATGTGATTTCCCCTAAAATTATAACATCATGTCATCCTAGAGTGTTACCCACCCCAGTTCCACATGTGTaGTCTCACTGCAGGAAATTA +
Preference number: 5 (lower is better)
Translates to: NVISPKIITSCHPRVLPTPVPHV*SHCRKL
Trigger: TAATTTCCTGCAGTGAGACAACACATGTGGAACTGG...GGTGGGTAACACTCTAGGATGACATGATGTTATAATTTTAGGGGAAATCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS-3UTR CAA 90 bp AAACTGACTTTATTAAACAGAGTCACTTCAGGCCTTTTTCTTATGAACAGAGTGCTCAGTATCTGCCTGTaGGTTATGTACAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: KLTLLNRVTSGLFLMNRVLSICL*VMYKAT
Trigger: TGTGGCTTTGTACATAACCAACAGGCAGATACTGAG...CACTCTGTTCATAAGAAAAAGGCCTGAAGTGACTCTGTTTAATAAAGTCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310455.4
ENST00000645121.2
CDS GCA 72 bp CCGCGGCAGCATACGCCCTGGGGGAACAGGGACAGCTaGCGTGACGGCAGGAGCTGGGCCCGGGCTCGGGTT +
Preference number: 6 (lower is better)
Translates to: PRQHTPWGNRDS*RDGRSWARARV
Trigger: AACCCGAGCCCGGGCCCAGCTCCTGCCGTCACGGCAGCTGTCCCTGTTCCCCCAGGGCGTATGCTGCCGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS CCA 72 bp GAGGGCAGACGCGCCAGCCCGCGGCAGCATACGCCCTaGGGGAACAGGGACAGCTGCCGTGACGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: EGRRASPRQHTP*GNRDSCRDGRS
Trigger: GCTCCTGCCGTCACGGCAGCTGTCCCTGTTCCCCCAGGGCGTATGCTGCCGCGGGCTGGCGCGTCTGCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519699.1
ENST00000644687.1
CDS GCA 72 bp CAGCCGGGGCCACCATTCCACTGGCTTCATTCTTGCTaGTCAGCTGAATACAAGGCCTCAGTGGTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: QPGPPFHWLHSC*SAEYKASVVCW
Trigger: CCAGCAAACCACTGAGGCCTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGCCCCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CCA 72 bp TCTGCGAAGGACACCCGCTTTTTCACCTTCTTCTCCTaGACAGCCGGGGCCACCATTCCACTGGCTTCATTC +
Preference number: 6 (lower is better)
Translates to: SAKDTRFFTFFS*TAGATIPLASF
Trigger: GAATGAAGCCAGTGGAATGGTGGCCCCGGCTGTCCAGGAGAAGAAGGTGAAAAAGCGGGTGTCCTTCGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS TCA 72 bp TCTGAACCTTCACAGTGCCTGCAATGGCCTTGTCCTTaGGCACACAGTTCTCAAGGCAGACGTGGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: SEPSQCLQWPCP*AHSSQGRRGRP
Trigger: AGGCCGACCACGTCTGCCTTGAGAACTGTGTGCTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 72 bp GGCATATCTAGCGGGTCATCGAATTCCGAGAACACTTaGACCATTGTCAGGGCCAGCCCCTGGTTGTCTGCG +
Preference number: 6 (lower is better)
Translates to: GISSGSSNSENT*TIVRASPWLSA
Trigger: CGCAGACAACCAGGGGCTGGCCCTGACAATGGTCAAAGTGTTCTCGGAATTCGATGACCCGCTAGATATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS TCA 72 bp GGGCAAGCTGATGTCGAAGGAGAACGTGTCCCTGTCTaGACCGGCATAAGTGTCCTTCACGTACTGACAAGG +
Preference number: 6 (lower is better)
Translates to: GQADVEGERVPV*TGISVLHVLTR
Trigger: CCTTGTCAGTACGTGAAGGACACTTATGCCGGTTCAGACAGGGACACGTTCTCCTTCGACATCAGCTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 72 bp GCAAACCTCTCTTGGCGCAAGGAAGGAGCCATGCAGTaGTATCTGTACTCGATGTCCACAGCCATCATGGGG +
Preference number: 6 (lower is better)
Translates to: ANLSWRKEGAMQ*YLYSMSTAIMG
Trigger: CCCCATGATGGCTGTGGACATCGAGTACAGATACAACTGCATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS TCA 72 bp GCCACCATTCCACTGGCTTCATTCTTGCTGCTCAGCTaGATACAAGGCCTCAGTGGTTTGCTGGGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: ATIPLASFLLLS*IQGLSGLLGFG
Trigger: ACCAAAGCCCAGCAAACCACTGAGGCCTTGTATTCAGCTGAGCAGCAAGAATGAAGCCAGTGGAATGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 90 bp CCGAACTGGTCAAAGGATATTCCCAAATCCGGTCCACTGTGGGGCTaGGTCATTCCCTGGGTAGATTTTAACTCAGCCCGGATGATCCTA +
Preference number: 6 (lower is better)
Translates to: PNWSKDIPKSGPLWG*VIPWVDFNSARMIL
Trigger: TAGGATCATCCGGGCTGAGTTAAAATCTACCCAGGGAATGACCAAGCCCCACAGTGGACCGGATTTGGGAATATCCTTTGACCAGTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 72 bp TCAAAGGATATTCCCAAATCCGGTCCACTGTGGGGCTaGGTCATTCCCTGGGTAGATTTTAACTCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: SKDIPKSGPLWG*VIPWVDFNSAR
Trigger: CCGGGCTGAGTTAAAATCTACCCAGGGAATGACCAAGCCCCACAGTGGACCGGATTTGGGAATATCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 90 bp TCCAGAACAAAGCTCTCGCTCTCTGCTGTCGTCAAGCTCACAATGTaGTCTAGGAGCTCGGTGATGTTGAATGGCATATCTAGCGGGTCA +
Preference number: 6 (lower is better)
Translates to: SRTKLSLSAVVKLTM*SRSSVMLNGISSGS
Trigger: TGACCCGCTAGATATGCCATTCAACATCACCGAGCTCCTAGACAACATTGTGAGCTTGACGACAGCAGAGAGCGAGAGCTTTGTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 90 bp GCAGTCACTAGTAGTAGGGCCCTAGCTTTTCATATCCTAAGTAACTaGGCCACTCTGGAAACAGACCATAGGAACACCGAGGGCTTCCGA +
Preference number: 6 (lower is better)
Translates to: AVTSSRALAFHILSN*ATLETDHRNTEGFR
Trigger: TCGGAAGCCCTCGGTGTTCCTATGGTCTGTTTCCAGAGTGGCCAAGTTACTTAGGATATGAAAAGCTAGGGCCCTACTACTAGTGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS TCA 72 bp CCATTCTTTCATAAGACTGAATCTTCTCGGGCAAGCTaGTGTCGAAGGAGAACGTGTCCCTGTCTGAACCGG +
Preference number: 6 (lower is better)
Translates to: PFFHKTESSRAS*CRRRTCPCLNR
Trigger: CCGGTTCAGACAGGGACACGTTCTCCTTCGACATCAGCTTGCCCGAGAAGATTCAGTCTTATGAAAGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS GCA 72 bp CTTCTCAAATGCGAGGTTCTGAACCTTCACAGTGCCTaGAATGGCCTTGTCCTTGAGCACACAGTTCTCAAG +
Preference number: 6 (lower is better)
Translates to: LLKCEVLNLHSA*NGLVLEHTVLK
Trigger: CTTGAGAACTGTGTGCTCAAGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CCA 72 bp CTGGGCTTTGGTGAGATCTTAAAGGCAAACCTCTCTTaGCGCAAGGAAGGAGCCATGCAGTTGTATCTGTAC +
Preference number: 6 (lower is better)
Translates to: LGFGEILKANLS*RKEGAMQLYLY
Trigger: GTACAGATACAACTGCATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTTTAAGATCTCACCAAAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 90 bp ATCTTAAAGGCAAACCTCTCTTGGCGCAAGGAAGGAGCCATGCAGTaGTATCTGTACTCGATGTCCACAGCCATCATGGGGCTAGATGAA +
Preference number: 6 (lower is better)
Translates to: ILKANLSWRKEGAMQ*YLYSMSTAIMGLDE
Trigger: TTCATCTAGCCCCATGATGGCTGTGGACATCGAGTACAGATACAACTGCATGGCTCCTTCCTTGCGCCAAGAGAGGTTTGCCTTTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 72 bp AAGCTCTCGCTCTCTGCTGTCGTCAAGCTCACAATGTaGTCTAGGAGCTCGGTGATGTTGAATGGCATATCT +
Preference number: 6 (lower is better)
Translates to: KLSLSAVVKLTM*SRSSVMLNGIS
Trigger: AGATATGCCATTCAACATCACCGAGCTCCTAGACAACATTGTGAGCTTGACGACAGCAGAGAGCGAGAGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS TCA 72 bp ATCCTTATTTTCACGGTCTTCTCAAATGCGAGGTTCTaGACCTTCACAGTGCCTGCAATGGCCTTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: ILIFTVFSNARF*TFTVPAMALSL
Trigger: CAAGGACAAGGCCATTGCAGGCACTGTGAAGGTTCAGAACCTCGCATTTGAGAAGACCGTGAAAATAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS GCA 72 bp TCTTGCCTCTGTTGCTGTCCCAGTACGTCTGTCCATTaGACTCGTAGTACACAGCAAACTCCATTCTTTCAT +
Preference number: 6 (lower is better)
Translates to: SCLCCCPSTSVH*TRSTQQTPFFH
Trigger: ATGAAAGAATGGAGTTTGCTGTGTACTACGAGTGCAATGGACAGACGTACTGGGACAGCAACAGAGGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2
CDS CAA 72 bp AGTAGTAGGGCCCTAGCTTTTCATATCCTAAGTAACTaGGCCACTCTGGAAACAGACCATAGGAACACCGAG +
Preference number: 6 (lower is better)
Translates to: SSRALAFHILSN*ATLETDHRNTE
Trigger: CTCGGTGTTCCTATGGTCTGTTTCCAGAGTGGCCAAGTTACTTAGGATATGAAAAGCTAGGGCCCTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310455.4
ENST00000519699.1
ENST00000644687.1
ENST00000645121.2