Pregenerated sensors for PPP1R36 (Homo sapiens)
Ensembl gene IDs: ENSG00000165807Ensembl transcript IDs: ENST00000298705.6, ENST00000467261.5, ENST00000554400.1, ENST00000555645.5, ENST00000556023.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGTAATGGTGCCCTGTTGACCTCGTTTCTCTACAGCTTTAGCTaGCTTATCATCTTTTGCAGCAAGTCTTTTATCTGTCAACCTGTC | + |
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Preference number: 1 (lower is better) Translates to: QCNGALLTSFLYSFS*LIIFCSKSFICQPV Trigger: GACAGGTTGACAGATAAAAGACTTGCTGCAAAAGATGATAAGTCAGCTAAAGCTGTAGAGAAACGAGGTCAACAGGGCACCATTACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGACCACTCTTGGCTTCCACACAAGTTAGACCTCTTTGATGGTTCTCAGAGAAGAGTAGGGTTTCCTTaGTTTTATGTCCTCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LDHSWLPHKLDLFDGSQRRVGFP*FYVLRG Trigger: TCCCCTGAGGACATAAAACCAAGGAAACCCTACTCT...TCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGGAAGCCAAGAGTGGTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGATGCTTATCCGGCACGGCCAAGCCCAGCACAAGGATACAGTACTTCTCAAAGTGAACTGCTTTaGCTTTCTTTCCTTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TCDAYPARPSPAQGYSTSQSELL*LSFLFP Trigger: AGGAAAAAGGAAAGAAAGGCAAAGCAGTTCACTTTG...AGAAGTACTGTATCCTTGTGCTGGGCTTGGCCGTGCCGGATAAGCATCACATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR TCA 90 bp | TATCATCTTTTGCAGCAAGTCTTTTATCTGTCAACCTGTCTGAAGCTGGACCATGGCAAACTGGCTGTATaGCTTTGGTTCAGTTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: YHLLQQVFYLSTCLKLDHGKLAV*LWFSCL Trigger: TAAGCAACTGAACCAAAGTCATACAGCCAGTTTGCC...ATGGTCCAGCTTCAGACAGGTTGACAGATAAAAGACTTGCTGCAAAAGATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGAATCTGACGTCTACTTGATGATACTTTTTCTCAAAGACGTTTTGAGCCTCTACAGCTTTAGCTaGCTTATCATCTTTTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GWESDVYLMILFLKDVLSLYSFS*LIIFCS Trigger: GCTGCAAAAGATGATAAGTCAGCTAAAGCTGTAGAG...GCTCAAAACGTCTTTGAGAAAAAGTATCATCAAGTAGACGTCAGATTCCCAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR TCA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCGTAATGGTGCCCTGTTaGCCTCGTTTCTCTACAGCT | + |
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Preference number: 2 (lower is better) Translates to: RCISVSCSKSKVTNLTSSVMVPC*PRFSTA Trigger: AGCTGTAGAGAAACGAGGTCAACAGGGCACCATTAC...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGAATCTGACGTCTACTTGATGATACTTTTTCTCAAAGACGTTTTGAGCAAAGAACAGATCCGCTaGATCTCAGTATCTTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: GWESDVYLMILFLKDVLSKEQIR*ISVSCS Trigger: GCTACAAGATACTGAGATGCAGCGGATCTGTTCTTT...GCTCAAAACGTCTTTGAGAAAAAGTATCATCAAGTAGACGTCAGATTCCCAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR GCA 72 bp | ACTACCGGCATGGGCACAGAGTCCAGAGTTCCCACATaGTTTTGCATCTCGGCTGGGAATCTGACGTCTACT | + |
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Preference number: 3 (lower is better) Translates to: TTGMGTESRVPT*FCISAGNLTST Trigger: AGTAGACGTCAGATTCCCAGCCGAGATGCAAAAGCATGTGGGAACTCTGGACTCTGTGCCCATGCCGGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR CCA 72 bp | CTTCTCTCAGGCCATGACGAAAGAGTAGGGTTTCCTTaGTTTTATGTCCTCAGGGGAGTCCATGACCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: LLSGHDERVGFP*FYVLRGVHDLG Trigger: GCCAAGGTCATGGACTCCCCTGAGGACATAAAACCAAGGAAACCCTACTCTTTCGTCATGGCCTGAGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| 3UTR TCA 72 bp | TTTCTTCTGGATCAAGGGGGTGAAGCGTATGTGGGTTaGATAGACATCGAGGCTCCCCCAAGATGCCAACTA | + |
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Preference number: 3 (lower is better) Translates to: FLLDQGGEAYVG*IDIEAPPRCQL Trigger: TAGTTGGCATCTTGGGGGAGCCTCGATGTCTATTCAACCCACATACGCTTCACCCCCTTGATCCAGAAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR TCA 72 bp | GGACCACTCTTGGCTTCCACACAAGTTAGACCTCTTTaGTGGTTCTCAGAGAGTCTTCTCTCAGGCCATGAC | + |
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Preference number: 3 (lower is better) Translates to: GPLLASTQVRPL*WFSESLLSGHD Trigger: GTCATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGGAAGCCAAGAGTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| 3UTR CCA 72 bp | AATCCATCACGTAAATGCAGAGGGCTGGACCACTCTTaGCTTCCACACAAGTTAGACCTCTTTGATGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: NPSRKCRGLDHS*LPHKLDLFDGS Trigger: AGAACCATCAAAGAGGTCTAACTTGTGTGGAAGCCAAGAGTGGTCCAGCCCTCTGCATTTACGTGATGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGGAATCTGACGTCTACTTGATGATACTTTTTCTCAAAGACGTTTTGAGCTGTAATGGTGCCCTGTaGACCTCGTTTCTCTACAGC | + |
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Preference number: 3 (lower is better) Translates to: GWESDVYLMILFLKDVLSCNGAL*TSFLYS Trigger: GCTGTAGAGAAACGAGGTCAACAGGGCACCATTACA...GCTCAAAACGTCTTTGAGAAAAAGTATCATCAAGTAGACGTCAGATTCCCAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR CAA 90 bp | TCTTGGCTTCCACACAAGTTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTAAGAGTAGGGTTTCCTaGGTTTTATGTCCTCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SWLPHKLDLFDGSQRVFSKSRVS*VLCPQG Trigger: CCCCTGAGGACATAAAACCAAGGAAACCCTACTCTT...AGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGGAAGCCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| 3UTR TCA 72 bp | CTGATTCCTCATCTTCACGCCTCCTGCGAGGAATGTTaGACATATTGGTACGAAAGAGTCTCCCTACTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LIPHLHASCEEC*TYWYERVSLLL Trigger: AAGAAGTAGGGAGACTCTTTCGTACCAATATGTTCAACATTCCTCGCAGGAGGCGTGAAGATGAGGAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR CCA 72 bp | AGAGTCCAGAGTTCCCACATGCTTTTGCATCTCGGCTaGGAATCTGACGTCTACTTGATGATACTTTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: RVQSSHMLLHLG*ESDVYLMILFL Trigger: GAGAAAAAGTATCATCAAGTAGACGTCAGATTCCCAGCCGAGATGCAAAAGCATGTGGGAACTCTGGACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR TCA 72 bp | GAGTTCCCACATGCTTTTGCATCTCGGCTGGGAATCTaGCGTCTACTTGATGATACTTTTTCTCAAAGACGT | + |
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Preference number: 3 (lower is better) Translates to: EFPHAFASRLGI*RLLDDTFSQRR Trigger: ACGTCTTTGAGAAAAAGTATCATCAAGTAGACGTCAGATTCCCAGCCGAGATGCAAAAGCATGTGGGAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR TCA 72 bp | TCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATaGCGAAAGAGTAGGGTTTCCTTGGTTTTATGTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLMVLRESSLRP*RKSRVSLVLCP Trigger: AGGACATAAAACCAAGGAAACCCTACTCTTTCGTCATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| 3UTR TCA 72 bp | GGTGCCCTGTTGACCTCGTTTCTCTACAGCTTTAGCTaGCTTATCATCTTTTGCAGCAAGTCTTTTATCTGT | + |
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Preference number: 3 (lower is better) Translates to: GALLTSFLYSFS*LIIFCSKSFIC Trigger: ACAGATAAAAGACTTGCTGCAAAAGATGATAAGTCAGCTAAAGCTGTAGAGAAACGAGGTCAACAGGGCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGGAATCTGACGTCTACTTGATGATACTTTTTCTCAAAGACGTTTTGAGCTTCTTTCCTTTTTCCTaGACTTCTGCTGCAGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: GWESDVYLMILFLKDVLSFFPFS*TSAAGV Trigger: TACACCTGCAGCAGAAGTCAAGGAAAAAGGAAAGAA...GCTCAAAACGTCTTTGAGAAAAAGTATCATCAAGTAGACGTCAGATTCCCAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR TCA 72 bp | GAGGACAGTGTTTTCATGACCAAGTCCAGTGTATCCTaGATCCTCATGTTATTGTTTTCCATCAAGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: EDSVFMTKSSVS*ILMLLFSIKEG Trigger: TCCTTCCTTGATGGAAAACAATAACATGAGGATTCAGGATACACTGGACTTGGTCATGAAAACACTGTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR CAA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCATGACTTTGGTTCAGTaGCTTAATCTCCCTGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: RCISVSCSKSKVTNLTSSMTLVQ*LNLPEP Trigger: AGGCTCAGGGAGATTAAGCAACTGAACCAAAGTCAT...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR TCA 72 bp | ACAAATTTAACATCATCCAGTGTAATGGTGCCCTGTTaGCCTCGTTTCTCTACAGCTTTAGCTGACTTATCA | + |
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Preference number: 3 (lower is better) Translates to: TNLTSSSVMVPC*PRFSTALADLS Trigger: TGATAAGTCAGCTAAAGCTGTAGAGAAACGAGGTCAACAGGGCACCATTACACTGGATGATGTTAAATTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR CAA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCACTGGCTGTATGACTTaGGTTCAGTTGCTTAATCTC | + |
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Preference number: 3 (lower is better) Translates to: RCISVSCSKSKVTNLTSSTGCMT*VQLLNL Trigger: GAGATTAAGCAACTGAACCAAAGTCATACAGCCAGT...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCTTGACTTCTGCTGCAGGTGTAAAACTTGAAGTAAACAGGAAAGAAATTTTCTTTCCTTTTTCCTaGACTTCTGCTGCAGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: FSLTSAAGVKLEVNRKEIFFPFS*TSAAGV Trigger: TACACCTGCAGCAGAAGTCAAGGAAAAAGGAAAGAA...AATTTCTTTCCTGTTTACTTCAAGTTTTACACCTGCAGCAGAAGTCAAGGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGCGGGCACCCGGTACATaGCCTCGCCCTGGAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLRAPGT*PRPGSH Trigger: ATGGCTTCCAGGGCGAGGCCATGTACCGGGTGCCCG...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CCA 90 bp | CCACACAAGTTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATGCGGGCACCCGGTACATaGCCTCGCCCTGGAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PHKLDLFDGSQRVFSQAMRAPGT*PRPGSH Trigger: ATGGCTTCCAGGGCGAGGCCATGTACCGGGTGCCCG...CATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CCA 90 bp | TTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATGACGAAAGAGTACATGGCCTCGCCCTaGAAGCCATACGGCGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: LDLFDGSQRVFSQAMTKEYMASP*KPYGVA Trigger: GGCGACGCCGTATGGCTTCCAGGGCGAGGCCATGTA...CTCTTTCGTCATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGGAAGCGTATGTGGGTTaGATAGACATCGAGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLEAYVG*IDIEAP Trigger: GGGAGCCTCGATGTCTATTCAACCCACATACGCTTC...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR GCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGTCCAGAGTTCCCACATaGTTTTGCATCTCGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLSRVPT*FCISAG Trigger: CCCAGCCGAGATGCAAAAGCATGTGGGAACTCTGGA...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | ACATGTGATGCTTATCCGGCACGGCCAAGCCCAGCACAAGGATACAGTACTTCTATCTGTCAACCTGTCTaGAGCTGGACCATCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TCDAYPARPSPAQGYSTSICQPV*SWTISF Trigger: GAAACTGATGGTCCAGCTTCAGACAGGTTGACAGAT...AGAAGTACTGTATCCTTGTGCTGGGCTTGGCCGTGCCGGATAAGCATCACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGGTAATGGTGCCCTGTTaGCCTCGTTTCTCTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLVMVPC*PRFSTA Trigger: AGCTGTAGAGAAACGAGGTCAACAGGGCACCATTAC...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | TTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATGACGAAAGAGCCTCAGGGGAGTCCATaGCCTTGGCAAACATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LDLFDGSQRVFSQAMTKEPQGSP*PWQTFR Trigger: CCTGAATGTTTGCCAAGGTCATGGACTCCCCTGAGG...CTCTTTCGTCATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CCA 90 bp | TATCATCTTTTGCAGCAAGTCTTTTATCTGTCAACCTGTCTGAAGCTGGACCATTACATGGCCTCGCCCTaGAAGCCATACGGCGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: YHLLQQVFYLSTCLKLDHYMASP*KPYGVA Trigger: GGCGACGCCGTATGGCTTCCAGGGCGAGGCCATGTA...ATGGTCCAGCTTCAGACAGGTTGACAGATAAAAGACTTGCTGCAAAAGATGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGTGTTTCAGGAGCCACTaGACAGAATCTTCTGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLCFRSH*TESSAA Trigger: TGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAACA...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CCA 90 bp | CCACACAAGTTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATGGGGCTGGACCACTCTTaGCTTCCACACAAGTTAGAC | + |
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Preference number: 4 (lower is better) Translates to: PHKLDLFDGSQRVFSQAMGLDHS*LPHKLD Trigger: GTCTAACTTGTGTGGAAGCCAAGAGTGGTCCAGCCC...CATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR TCA 90 bp | AATCTTCTGCGGCAAACTGGCTGTATGACTTTGGTTCAGTTGCTTAATCTCCCTTTTCCACAGCACATGTaGTGCTTATCCGGCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: NLLRQTGCMTLVQLLNLPFPQHM*CLSGTA Trigger: GGCCGTGCCGGATAAGCATCACATGTGCTGTGGAAA...AGGGAGATTAAGCAACTGAACCAAAGTCATACAGCCAGTTTGCCGCAGAAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR GCA 90 bp | TTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATGACGAAAGAGAGACTGCTGGTTCTCTaGCAGCTTTGGAATAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LDLFDGSQRVFSQAMTKERLLVL*QLWNRG Trigger: GCCCCTATTCCAAAGCTGGCAGAGAACCAGCAGTCT...CTCTTTCGTCATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGAGGTTACTTAGGGCATaGTGTATGAGAGGACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLRLLRA*CMRGQC Trigger: ACACTGTCCTCTCATACATCATGCCCTAAGTAACCT...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGGGCAAACTGGCTGTATaGCTTTGGTTCAGTTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLGKLAV*LWFSCL Trigger: TAAGCAACTGAACCAAAGTCATACAGCCAGTTTGCC...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR GCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGTTCCTTGACTTCTGCTaGAGGTGTAAAATGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLFLDFC*RCKMRV Trigger: CACCCTCATTTTACACCTGCAGCAGAAGTCAAGGAA...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR GCA 90 bp | ACATGTGATGCTTATCCGGCACGGCCAAGCCCAGCACAAGGATACAGTACTTCTAAAGAACAGATCCGCTaGATCTCAGTATCTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TCDAYPARPSPAQGYSTSKEQIR*ISVSCS Trigger: GCTACAAGATACTGAGATGCAGCGGATCTGTTCTTT...AGAAGTACTGTATCCTTGTGCTGGGCTTGGCCGTGCCGGATAAGCATCACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | TCTTGGCTTCCACACAAGTTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTTCTTCTCTCAGGCCATaGCGAAAGAGTAGGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SWLPHKLDLFDGSQRVFSSSLRP*RKSRVS Trigger: GGAAACCCTACTCTTTCGTCATGGCCTGAGAGAAGA...AGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGGAAGCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CCA 90 bp | TATCATCTTTTGCAGCAAGTCTTTTATCTGTCAACCTGTCTGAAGCTGGACCATTGCCAACTACCGGCATaGGCACAGAGTCCAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: YHLLQQVFYLSTCLKLDHCQLPA*AQSPEF Trigger: GAACTCTGGACTCTGTGCCCATGCCGGTAGTTGGCA...ATGGTCCAGCTTCAGACAGGTTGACAGATAAAAGACTTGCTGCAAAAGATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| 3UTR CAA 72 bp | CCTGATTCCTCATCTTCACGCCTCCTGCGAGGAATGTaGAACATATTGGTACGAAAGAGTCTCCCTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PDSSSSRLLRGM*NILVRKSLPTS Trigger: AGAAGTAGGGAGACTCTTTCGTACCAATATGTTCAACATTCCTCGCAGGAGGCGTGAAGATGAGGAATCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGGAGCCACTGGACAGAATCTTCTGCGGCAAACTGGCTGTATGACTTTGATCATTCTCCTGAACTaGACAAAAGTCATGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VSGATGQNLLRQTGCMTLIILLN*TKVMRF Trigger: GAAACGCATGACTTTTGTTCAGTTCAGGAGAATGAT...CAAAGTCATACAGCCAGTTTGCCGCAGAAGATTCTGTCCAGTGGCTCCTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | AATCTTCTGCGGCAAACTGGCTGTATGACTTTGGTTCAGTTGCTTAATCTCCCTTCTCGGCTGGGAATCTaGCGTCTACTTGATGATACT | + |
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Preference number: 4 (lower is better) Translates to: NLLRQTGCMTLVQLLNLPSRLGI*RLLDDT Trigger: AGTATCATCAAGTAGACGTCAGATTCCCAGCCGAGA...AGGGAGATTAAGCAACTGAACCAAAGTCATACAGCCAGTTTGCCGCAGAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | ACATGTGATGCTTATCCGGCACGGCCAAGCCCAGCACAAGGATACAGTACTTCTAAGTCCAGTGTATCCTaGATCCTCATGTTATTGTTT | + |
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Preference number: 4 (lower is better) Translates to: TCDAYPARPSPAQGYSTSKSSVS*ILMLLF Trigger: AAACAATAACATGAGGATTCAGGATACACTGGACTT...AGAAGTACTGTATCCTTGTGCTGGGCTTGGCCGTGCCGGATAAGCATCACATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CCA 90 bp | ACATGTGATGCTTATCCGGCACGGCCAAGCCCAGCACAAGGATACAGTACTTCTCTACCATATAGCTTTTaGGTTTCTTTTCCAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: TCDAYPARPSPAQGYSTSLPYSF*VSFPVS Trigger: ACTCACTGGAAAAGAAACCCAAAAGCTATATGGTAG...AGAAGTACTGTATCCTTGTGCTGGGCTTGGCCGTGCCGGATAAGCATCACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CCA 90 bp | AATCTTCTGCGGCAAACTGGCTGTATGACTTTGGTTCAGTTGCTTAATCTCCCTCTTTTGCATCTCGGCTaGGAATCTGACGTCTACTTG | + |
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Preference number: 4 (lower is better) Translates to: NLLRQTGCMTLVQLLNLPLLHLG*ESDVYL Trigger: CAAGTAGACGTCAGATTCCCAGCCGAGATGCAAAAG...AGGGAGATTAAGCAACTGAACCAAAGTCATACAGCCAGTTTGCCGCAGAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CCA 90 bp | TCATATTTTCTCTCTAGAATCCATCACGTAAATGCAGAGGGCTGGACCACTCTTATTCAGGCAGACTGCTaGTTCTCTGCCAGCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SYFLSRIHHVNAEGWTTLIQADC*FSASFG Trigger: TCCAAAGCTGGCAGAGAACCAGCAGTCTGCCTGAAT...AAGAGTGGTCCAGCCCTCTGCATTTACGTGATGGATTCTAGAGAGAAAATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR TCA 90 bp | TTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATGACGAAAGAGCAAGTTAGACCTCTTTaGTGGTTCTCAGAGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LDLFDGSQRVFSQAMTKEQVRPL*WFSESL Trigger: AAGACTCTCTGAGAACCATCAAAGAGGTCTAACTTG...CTCTTTCGTCATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAAATTCATATTTTCTCTCTAGAATCCATCACGTAAATGCAGAGGGCTGGGTTCTCTGCCAGCTTTaGAATAGGGGCATGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ERNSYFLSRIHHVNAEGWVLCQL*NRGMRV Trigger: CACCCTCATGCCCCTATTCCAAAGCTGGCAGAGAAC...CCAGCCCTCTGCATTTACGTGATGGATTCTAGAGAGAAAATATGAATTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR TCA 90 bp | GGCTGGGAATCTGACGTCTACTTGATGATACTTTTTCTCAAAGACGTTTTGAGCAGGACAGTGTTTTCATaGCCAAGTCCAGTGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: GWESDVYLMILFLKDVLSRTVFS*PSPVYP Trigger: AGGATACACTGGACTTGGTCATGAAAACACTGTCCT...GCTCAAAACGTCTTTGAGAAAAAGTATCATCAAGTAGACGTCAGATTCCCAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR GCA 90 bp | TCATATTTTCTCTCTAGAATCCATCACGTAAATGCAGAGGGCTGGACCACTCTTCTGGACAGAATCTTCTaGGGCAAACCTTCTGAATTC | + |
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Preference number: 4 (lower is better) Translates to: SYFLSRIHHVNAEGWTTLLDRIF*GKPSEF Trigger: GAATTCAGAAGGTTTGCCGCAGAAGATTCTGTCCAG...AAGAGTGGTCCAGCCCTCTGCATTTACGTGATGGATTCTAGAGAGAAAATATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR GCA 90 bp | CCACACAAGTTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATGCAAAGTGAACTGCTTTaGCTTTCTTTCCTTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PHKLDLFDGSQRVFSQAMQSELL*LSFLFP Trigger: AGGAAAAAGGAAAGAAAGGCAAAGCAGTTCACTTTG...CATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CCA 90 bp | AATCTTCTGCGGCAAACTGGCTGTATGACTTTGGTTCAGTTGCTTAATCTCCCTTTTTTCTCTGAGAGATaGCAGCAGAGTAGACATGAC | + |
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Preference number: 4 (lower is better) Translates to: NLLRQTGCMTLVQLLNLPFFSER*QQSRHD Trigger: GTCATGTCTACTCTGCTGCCATCTCTCAGAGAAAAA...AGGGAGATTAAGCAACTGAACCAAAGTCATACAGCCAGTTTGCCGCAGAAGATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCTCTGGATCAAGGGGGTaGAGCGTATGTGGGTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: RCISVSCSKSKVTNLTSSSGSRG*SVCGLN Trigger: ATTCAACCCACATACGCTTCACCCCCTTGATCCAGA...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR GCA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCGTTCCCACATGCTTTTaGATCTCGGCTGGGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: RCISVSCSKSKVTNLTSSVPTCF*ISAGNL Trigger: CAGATTCCCAGCCGAGATGCAAAAGCATGTGGGAAC...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CCA 90 bp | TATCATCTTTTGCAGCAAGTCTTTTATCTGTCAACCTGTCTGAAGCTGGACCATCAGAGTAGACATGACTaGAGAACGCATGTTGATAGC | + |
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Preference number: 4 (lower is better) Translates to: YHLLQQVFYLSTCLKLDHQSRHD*RTHVDS Trigger: GCTATCAACATGCGTTCTCCAGTCATGTCTACTCTG...ATGGTCCAGCTTCAGACAGGTTGACAGATAAAAGACTTGCTGCAAAAGATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR GCA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCAGGATACAGTACTTCTaGGCCAAGTACCTCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RCISVSCSKSKVTNLTSSRIQYF*AKYLCA Trigger: AGCACAGAGGTACTTGGCGCAGAAGTACTGTATCCT...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAAATTCATATTTTCTCTCTAGAATCCATCACGTAAATGCAGAGGGCTGGAGAGTAGGGTTTCCTTaGTTTTATGTCCTCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: ERNSYFLSRIHHVNAEGWRVGFP*FYVLRG Trigger: TCCCCTGAGGACATAAAACCAAGGAAACCCTACTCT...CCAGCCCTCTGCATTTACGTGATGGATTCTAGAGAGAAAATATGAATTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR GCA 90 bp | TTTTCCTTGACTTCTGCTGCAGGTGTAAAACTTGAAGTAAACAGGAAAGAAATTAATCCATCACGTAAATaGAGAGGGCTGGACCACTCT | + |
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Preference number: 4 (lower is better) Translates to: FSLTSAAGVKLEVNRKEINPSRK*RGLDHS Trigger: AGAGTGGTCCAGCCCTCTGCATTTACGTGATGGATT...AATTTCTTTCCTGTTTACTTCAAGTTTTACACCTGCAGCAGAAGTCAAGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR TCA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCTCCTGCGAGGAATGTTaGACATATTGGTACGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: RCISVSCSKSKVTNLTSSSCEEC*TYWYER Trigger: TCTTTCGTACCAATATGTTCAACATTCCTCGCAGGA...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR TCA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCTTAGGGCATGATGTATaGGAGGACAGTGTTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: RCISVSCSKSKVTNLTSSLGHDV*EDSVFM Trigger: CATGAAAACACTGTCCTCTCATACATCATGCCCTAA...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS CCA 90 bp | CACCTAACCGCTTCCTCCTCGCATAAAACTCGGGCACCCGGTACATaGCCTCGCCCTGGAAGCCATACGGCGTCGCCGAGGATACCGCCC | + |
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Preference number: 5 (lower is better) Translates to: HLTASSSHKTRAPGT*PRPGSHTASPRIPP Trigger: GGGCGGTATCCTCGGCGACGCCGTATGGCTTCCAGGGCGAGGCCATGTACCGGGTGCCCGAGTTTTATGCGAGGAGGAAGCGGTTAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467261.5 ENST00000555645.5 |
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| CDS GCA 90 bp | TCCAGCCCCACCTGGGATGCCACCTCAAGGCACTCATGCTTCTCTTaGCAAGCCACTTACACCGGCATGGGCACAGAGTCCAGAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SSPTWDATSRHSCFS*QATYTGMGTESRVP Trigger: GGGAACTCTGGACTCTGTGCCCATGCCGGTGTAAGTGGCTTGGCAAGAGAAGCATGAGTGCCTTGAGGTGGCATCCCAGGTGGGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556023.1 |
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| CDS-3UTR CAA 90 bp | CCACACAAGTTAGACCTCTTTGATGGTTCTCAGAGAGTCTTCTCTCAGGCCATGGGGGAGTCCATGACCTaGGCAAACATTCAGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PHKLDLFDGSQRVFSQAMGESMT*ANIQAD Trigger: GTCTGCCTGAATGTTTGCCAAGGTCATGGACTCCCC...CATGGCCTGAGAGAAGACTCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CAA 90 bp | CTGGACCACTCTTGGCTTCCACACAAGTTAGACCTCTTTGATGGTTCTCAGAGAAGGGCTGGACCACTCTaGGCTTCCACACAAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: LDHSWLPHKLDLFDGSQRRAGPL*ASTQVR Trigger: TCTAACTTGTGTGGAAGCCAAGAGTGGTCCAGCCCT...TCTCTGAGAACCATCAAAGAGGTCTAACTTGTGTGGAAGCCAAGAGTGGTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CAA 90 bp | ACATGTGATGCTTATCCGGCACGGCCAAGCCCAGCACAAGGATACAGTACTTCTATGACTTTGGTTCAGTaGCTTAATCTCCCTGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: TCDAYPARPSPAQGYSTSMTLVQ*LNLPEP Trigger: AGGCTCAGGGAGATTAAGCAACTGAACCAAAGTCAT...AGAAGTACTGTATCCTTGTGCTGGGCTTGGCCGTGCCGGATAAGCATCACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS CCA 90 bp | TCAGAGAGTCTTCTCTCAGGCCATGACGAAAGAGTAGGGTTTCCTTaGTTTTATGTCCTCAGGGGAGTCCATGACCTTGGCAAACATTCA | + |
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Preference number: 5 (lower is better) Translates to: SESLLSGHDERVGFP*FYVLRGVHDLGKHS Trigger: TGAATGTTTGCCAAGGTCATGGACTCCCCTGAGGACATAAAACCAAGGAAACCCTACTCTTTCGTCATGGCCTGAGAGAAGACTCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS TCA 90 bp | CAGAAACAAAATCCACAAAGATCTATGCCAAAACAACCAATAGACTaGGAACGGCAGTGTGCTCCTCCTTCTGATGGGCATGGACAAACC | + |
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Preference number: 5 (lower is better) Translates to: QKQNPQRSMPKQPID*ERQCAPPSDGHGQT Trigger: GGTTTGTCCATGCCCATCAGAAGGAGGAGCACACTGCCGTTCTCAGTCTATTGGTTGTTTTGGCATAGATCTTTGTGGATTTTGTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554400.1 |
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| CDS-3UTR CAA 90 bp | GGCTGGGAATCTGACGTCTACTTGATGATACTTTTTCTCAAAGACGTTTTGAGCAGTTCCCACATGCTTTaGCATCTCGGCTGGGAATCT | + |
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Preference number: 5 (lower is better) Translates to: GWESDVYLMILFLKDVLSSSHML*HLGWES Trigger: AGATTCCCAGCCGAGATGCAAAAGCATGTGGGAACT...GCTCAAAACGTCTTTGAGAAAAAGTATCATCAAGTAGACGTCAGATTCCCAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CAA 90 bp | TCATATTTTCTCTCTAGAATCCATCACGTAAATGCAGAGGGCTGGACCACTCTTAAGAGTAGGGTTTCCTaGGTTTTATGTCCTCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SYFLSRIHHVNAEGWTTLKSRVS*VLCPQG Trigger: CCCCTGAGGACATAAAACCAAGGAAACCCTACTCTT...AAGAGTGGTCCAGCCCTCTGCATTTACGTGATGGATTCTAGAGAGAAAATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS-3UTR CAA 90 bp | AATCTTCTGCGGCAAACTGGCTGTATGACTTTGGTTCAGTTGCTTAATCTCCCTACTGGCTGTATGACTTaGGTTCAGTTGCTTAATCTC | + |
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Preference number: 5 (lower is better) Translates to: NLLRQTGCMTLVQLLNLPTGCMT*VQLLNL Trigger: GAGATTAAGCAACTGAACCAAAGTCATACAGCCAGT...AGGGAGATTAAGCAACTGAACCAAAGTCATACAGCCAGTTTGCCGCAGAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CAA 90 bp | CGCTGCATCTCAGTATCTTGTAGCAAAAGCAAAGTAACAAATTTAACATCATCCCTCCTGCGAGGAATGTaGAACATATTGGTACGAAAG | + |
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Preference number: 5 (lower is better) Translates to: RCISVSCSKSKVTNLTSSLLRGM*NILVRK Trigger: CTTTCGTACCAATATGTTCAACATTCCTCGCAGGAG...GGATGATGTTAAATTTGTTACTTTGCTTTTGCTACAAGATACTGAGATGCAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS-3UTR CAA 90 bp | TATCATCTTTTGCAGCAAGTCTTTTATCTGTCAACCTGTCTGAAGCTGGACCATTTTCTCAAAGACGTTTaGAGCTTTTTCTCTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: YHLLQQVFYLSTCLKLDHFLKDV*SFFSER Trigger: TCTCTCAGAGAAAAAGCTCAAAACGTCTTTGAGAAA...ATGGTCCAGCTTCAGACAGGTTGACAGATAAAAGACTTGCTGCAAAAGATGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000467261.5 |
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| CDS CCA 72 bp | GCTTCCTCCTCGCATAAAACTCGGGCACCCGGTACATaGCCTCGCCCTGGAAGCCATACGGCGTCGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASSSHKTRAPGT*PRPGSHTASPR Trigger: CCTCGGCGACGCCGTATGGCTTCCAGGGCGAGGCCATGTACCGGGTGCCCGAGTTTTATGCGAGGAGGAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298705.6 ENST00000467261.5 ENST00000555645.5 |
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| CDS CAA 90 bp | TTCCAGCCCCACCTGGGATGCCACCTCAAGGCACTCATGCTTCTCTaGCCAAGCCACTTACACCGGCATGGGCACAGAGTCCAGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FQPHLGCHLKALMLL*PSHLHRHGHRVQSS Trigger: GGAACTCTGGACTCTGTGCCCATGCCGGTGTAAGTGGCTTGGCAAGAGAAGCATGAGTGCCTTGAGGTGGCATCCCAGGTGGGGCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556023.1 |
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| CDS GCA 72 bp | ACCTGGGATGCCACCTCAAGGCACTCATGCTTCTCTTaGCAAGCCACTTACACCGGCATGGGCACAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TWDATSRHSCFS*QATYTGMGTES Trigger: GGACTCTGTGCCCATGCCGGTGTAAGTGGCTTGGCAAGAGAAGCATGAGTGCCTTGAGGTGGCATCCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556023.1 |
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| CDS CAA 72 bp | CACCTGGGATGCCACCTCAAGGCACTCATGCTTCTCTaGCCAAGCCACTTACACCGGCATGGGCACAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: HLGCHLKALMLL*PSHLHRHGHRV Trigger: GACTCTGTGCCCATGCCGGTGTAAGTGGCTTGGCAAGAGAAGCATGAGTGCCTTGAGGTGGCATCCCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556023.1 |
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| CDS CCA 72 bp | AAACATTCAGGCAGACTGCTGGTTCTCTGCCAGCTTTaGAATAGGGGCATGAGGGTGATGTTTCAGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KHSGRLLVLCQL*NRGMRVMFQEP Trigger: TGGCTCCTGAAACATCACCCTCATGCCCCTATTCCAAAGCTGGCAGAGAACCAGCAGTCTGCCTGAATGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS TCA 72 bp | AGGGTTTCCTTGGTTTTATGTCCTCAGGGGAGTCCATaGCCTTGGCAAACATTCAGGCAGACTGCTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RVSLVLCPQGSP*PWQTFRQTAGS Trigger: AGAACCAGCAGTCTGCCTGAATGTTTGCCAAGGTCATGGACTCCCCTGAGGACATAAAACCAAGGAAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555645.5 |
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| CDS TCA 72 bp | AATCCACAAAGATCTATGCCAAAACAACCAATAGACTaGGAACGGCAGTGTGCTCCTCCTTCTGATGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: NPQRSMPKQPID*ERQCAPPSDGH Trigger: ATGCCCATCAGAAGGAGGAGCACACTGCCGTTCTCAGTCTATTGGTTGTTTTGGCATAGATCTTTGTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554400.1 |
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