RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R21 (Homo sapiens)

Ensembl gene IDs: ENSG00000162869

Ensembl transcript IDs: ENST00000281394.8, ENST00000294952.13, ENST00000416913.5, ENST00000421486.1, ENST00000431614.5, ENST00000449090.6, ENST00000455978.1

Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGAAGGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCAGCTATT +
Preference number: 1 (lower is better)
Translates to: PEGSQHGRGLSPAAL*SRSRSGKNSRQPAI
Trigger: AATAGCTGGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR GCA 90 bp CATGTACTTCCGGGTGAGACCGTCAACCACAGCTTGGTGCTGGGCTaGTTCTGTCTCCAGAGTGGCCAGTCGACTCCTCAGCTCTGCTTC +
Preference number: 1 (lower is better)
Translates to: HVLPGETVNHSLVLG*FCLQSGQSTPQLCF
Trigger: GAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR CCA 90 bp GACCGTCAACCACAGCTTGGTGCTGGGCTGCTTCTGTCTCCAGAGTaGCCAGTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCT +
Preference number: 1 (lower is better)
Translates to: DRQPQLGAGLLLSPE*PVDSSALLPHACAA
Trigger: AGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR CCA 90 bp GTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTGGTGCTaGGCTGCTTCTGTCTCCAGAGTGGCCAGTCGACTCCTCAGCTCT +
Preference number: 1 (lower is better)
Translates to: VSMYFRVRPSTTAWC*AASVSRVASRLLSS
Trigger: AGAGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR CCA 90 bp TCAATGGTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTaGTGCTGGGCTGCTTCTGTCTCCAGAGTGGCCAGTCGACTCCTC +
Preference number: 1 (lower is better)
Translates to: SMVSMYFRVRPSTTA*CWAASVSRVASRLL
Trigger: GAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR CCA 90 bp TGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTaGAAAGAACAGTCGCCAACCAGCTATTTCAAAACTATCGACTCT +
Preference number: 1 (lower is better)
Translates to: WTWSQPCGSVQQEQV*KEQSPTSYFKTIDS
Trigger: AGAGTCGATAGTTTTGAAATAGCTGGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR CCA 90 bp GTGGCTTCATCCTGGCCAGCAGTATTTGACACAGCAGCATTTTCCTaGGCCAGCCCAACCAGCTGGGCACTACCTGTATTCTTCAGCTTA +
Preference number: 1 (lower is better)
Translates to: VASSWPAVFDTAAFS*ASPTSWALPVFFSL
Trigger: TAAGCTGAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGGATGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR GCA 90 bp TTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTaGTTCTTCATAAGGCACAGACTCCAAGAGGGGCTTTCTCAAAGA +
Preference number: 1 (lower is better)
Translates to: FSTFSRAEKDAAVCQ*FFIRHRLQEGLSQR
Trigger: TCTTTGAGAAAGCCCCTCTTGGAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
3UTR CCA 90 bp CAAAGAGCTGAAGATAATGATACTAAACCCACAGGATCTGAAGTTTaGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: QRAEDNDTKPTGSEV*RAPSPSERKKRERE
Trigger: CTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATTATCTTCAGCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR CCA 90 bp ACCAGCTGGGCACTACCTGTATTCTTCAGCTTATCTGCAATTCGCTaGTTTTCTTTCTCTAGCTTGATTTTGGCTAATTGTGCTTCCAAC +
Preference number: 1 (lower is better)
Translates to: TSWALPVFFSLSAIR*FSFSSLILANCASN
Trigger: GTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAATACAGGTAGTGCCCAGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR TCA 90 bp TTCTTGTTTTTCTTGCCTCGTGGTTCACTTAGAGCTAGTTCATCTTaGAGTAGTTCTACCCTCTTGGCAAGCTGCAGATTTCGAAATGTC +
Preference number: 1 (lower is better)
Translates to: FLFFLPRGSLRASSS*SSSTLLASCRFRNV
Trigger: GACATTTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAAGAAAAACAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR CCA 90 bp GTGGTTCACTTAGAGCTAGTTCATCTTGAAGTAGTTCTACCCTCTTaGCAAGCTGCAGATTTCGAAATGTCAAACTGTCCATTTCCTGTT +
Preference number: 1 (lower is better)
Translates to: VVHLELVHLEVVLPS*QAADFEMSNCPFPV
Trigger: AACAGGAAATGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR CAA 90 bp CTCAATGGTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTaGGTGCTGGGCTGCTTCTGTCTCCAGAGTGGCCAGTCGACTCCT +
Preference number: 2 (lower is better)
Translates to: LNGFHVLPGETVNHS*VLGCFCLQSGQSTP
Trigger: AGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR GCA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: GSEVWRAPSPSERKKRERSPAAL*SRSRSG
Trigger: TCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCT...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR CCA 90 bp AACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGCCGTCAACCACAGCTTaGTGCTGGGCTGCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: NLLCKAFSTFSRAEKDAAPSTTA*CWAASV
Trigger: GACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGG...CGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGACAGCAGGAGCAGGTCTaGAAAGAACAGTCGCCAACC +
Preference number: 2 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRQQEQV*KEQSPT
Trigger: GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTG...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR GCA 90 bp CCTGAACAAAAGCCAGGGCCTGCCCAGCAATATCTCGCATCTTCAGCTGGTGTCAGCTCTGCTTCCACATaGTTGTGCTGCTCATCAGCT +
Preference number: 2 (lower is better)
Translates to: PEQKPGPAQQYLASSAGVSSAST*LCCSSA
Trigger: AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCT...GACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGCAGCAGGAGCAGGTCTaGAAAGAACAGTCGCCAACC +
Preference number: 2 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKQQEQV*KEQSPT
Trigger: GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTG...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR TCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAAATACTTTAGCTTCCTaGAGGCAGCCAGCATGGACG +
Preference number: 2 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRNTLAS*RQPAWT
Trigger: CGTCCATGCTGGCTGCCTTCAGGAAGCTAAAGTATT...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR TCA 90 bp GCTTCCTTAGACTTTTCAGCCAAGGCCAGTCTTTTAGACAGTGCTCGGCACTCGATTAGACTGGTGCTCTaGATGGGCTCCAACACAGCC +
Preference number: 2 (lower is better)
Translates to: ASLDFSAKASLLDSARHSIRLVL*MGSNTA
Trigger: GGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAAT...CGAGTGCCGAGCACTGTCTAAAAGACTGGCCTTGGCTGAAAAGTCTAAGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR GCA 90 bp AACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGAGCTCTGCTTCCACATaGTTGTGCTGCTCATCAGCT +
Preference number: 2 (lower is better)
Translates to: NLLCKAFSTFSRAEKDAASSAST*LCCSSA
Trigger: AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCT...CGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR GCA 90 bp TCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATATCGACTCCTCAGCTCTaGTTCCACATGCTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: STFSRAEKDAAVCQCFFISTPQL*FHMLVL
Trigger: CAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGA...TATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR GCA 90 bp AGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAGGCACAGACTCAATGAATCCACTCGCTaGCTTAGGTCCATAGCTCAG +
Preference number: 2 (lower is better)
Translates to: RAEKDAAVCQCFFIRHRLNESTR*LRSIAQ
Trigger: CTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATT...GAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
3UTR-3UTR CCA 90 bp CTTCCTCAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTCCGTCAACCACAGCTTaGTGCTGGGCTGCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: LPQEGGHRTHFHEGIVRTPSTTA*CWAASV
Trigger: GACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGG...AGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp CCACATCTGGAACCTCACTGTCAGATGTCCTGGTTAAAGTCCCAATTAGACTGGCCGAAGGAGTCCATCTaGCTCTGTACTTGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: PHLEPHCQMSWLKSQLDWPKESI*LCTWQG
Trigger: GCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGG...CCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR TCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAATACTTTAGCTTCCTaGAGGCAGCCAGCATGGACG +
Preference number: 2 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSENTLAS*RQPAWT
Trigger: CGTCCATGCTGGCTGCCTTCAGGAAGCTAAAGTATT...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR TCA 90 bp CAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTTCTGATCCATGTACTTCCGGGTaGGACCGTCAACCACAGCTT +
Preference number: 2 (lower is better)
Translates to: QEGGHRTHFHEGIVRTSDPCTSG*DRQPQL
Trigger: AAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGG...ATCAGAAGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR GCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: HTYCFPFTADINFCICLTSPAAL*SRSRSG
Trigger: TCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCT...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR GCA 90 bp ATGTTTGGAAATATCTTTCATAACGTCATGAAATCCATGCAGAGCAGCACCAACAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: MFGNIFHNVMKSMQSSTNSPAAL*SRSRSG
Trigger: TCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCT...GTTGGTGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR-3UTR GCA 90 bp TTGGCAAGGCAAGAAGAGCTATGTAAGTCTGCAGCTTCTCAAACACAGCTGTCAACAAAAGCCAGGGCCTaGCCAGCAATATCTCGCATC +
Preference number: 2 (lower is better)
Translates to: LARQEELCKSAASQTQLSTKARA*PAISRI
Trigger: GATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGT...TGACAGCTGTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp CCACATCTGGAACCTCACTGTCAGATGTCCTGGTTAAAGTCCCAATTAGACTGGTGGTGTCTCCTATTGTaGAGTGGAACGTTCAGAGCG +
Preference number: 2 (lower is better)
Translates to: PHLEPHCQMSWLKSQLDWWCLLL*SGTFRA
Trigger: CGCTCTGAACGTTCCACTCCACAATAGGAGACACCA...CCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR TCA 90 bp TCATGCTGCACAGGTGGTCACTCATCATACTTAACTGATCCTCGTAACTCCTCTCTGGCCAGCAGTATTTaGCACAGCAGCATTTTCCTG +
Preference number: 2 (lower is better)
Translates to: SCCTGGHSSYLTDPRNSSLASSI*HSSIFL
Trigger: CAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAG...AGAGGAGTTACGAGGATCAGTTAAGTATGATGAGTGACCACCTGTGCAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR GCA 90 bp AGTTTGTCCGAAGGAGTCCATCTGGCTCTGTACTTGGCAAGGCAAGAAGAGCTAGCTTCCACATGCTTGTaGTGCTCATCAGCTTCAAAA +
Preference number: 2 (lower is better)
Translates to: SLSEGVHLALYLARQEELASTCL*CSSASK
Trigger: TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGC...TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR CAA 90 bp ATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTGGCTCTGTACTTGGCAAGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: IHAEQHQHLLTQNCS*SEGVHLALYLARQE
Trigger: TTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR TCA 90 bp TCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAGAGCTAGTTCATCTTaGAGTAGTTCTACCCTCTTG +
Preference number: 2 (lower is better)
Translates to: STFSRAEKDAAVCQCFFIRASSS*SSSTLL
Trigger: CAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCT...TATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR-3UTR GCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATAAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: LNISRPFPTLTSLLGPTISPAAL*SRSRSG
Trigger: TCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCT...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR GCA 90 bp GTCTCCTATTGTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATTCAACCACAGCTTGGTaGTGGGCTGCTTCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: VSYCGVERSERCTDYILYSTTAW*WAASVS
Trigger: GGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGA...ATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACAGCCAGCATGGACGTaGTCTCAGCCCTGCGGCTCT +
Preference number: 2 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIQPAWT*SQPCGS
Trigger: AGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR CCA 90 bp GTCTCCTATTGTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATCTTCTGTCTCCAGAGTaGCCAGTCGACTCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VSYCGVERSERCTDYILYLLSPE*PVDSSA
Trigger: AGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAG...ATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp TTGGCAAGGCAAGAAGAGCTATGTAAGTCTGCAGCTTCTCAAACACAGCTGTCATCTCGCATCTTCAGCTaGTGTCTCCTATTGTGGAGT +
Preference number: 2 (lower is better)
Translates to: LARQEELCKSAASQTQLSSRIFS*CLLLWS
Trigger: ACTCCACAATAGGAGACACCAGCTGAAGATGCGAGA...TGACAGCTGTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR TCA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGAATACTTTAGCTTCCTaGAGGCAGCCAGCATGGACG +
Preference number: 2 (lower is better)
Translates to: EESLTVIDILPFEVDIPWNTLAS*RQPAWT
Trigger: CGTCCATGCTGGCTGCCTTCAGGAAGCTAAAGTATT...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR-3UTR TCA 90 bp CTCTTAACGCAGATGTGCAAAGAGAGGATTCACATTCTTCTTCTAAACTTTTTAGCCGTCACAAGATCCTaGACAAAAGCCAGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: LLTQMCKERIHILLLNFLAVTRS*TKARAC
Trigger: GCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGC...TAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTCAGCAGGAGCAGGTCTaGAAAGAACAGTCGCCAACC +
Preference number: 2 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTQQEQV*KEQSPT
Trigger: GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTG...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR CCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACAGCAGGAGCAGGTCTaGAAAGAACAGTCGCCAACC +
Preference number: 2 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIQQEQV*KEQSPT
Trigger: GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTG...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR CCA 90 bp CTCTTAACGCAGATGTGCAAAGAGAGGATTCACATTCTTCTTCTAAACTTTTTACTTCTGTCTCCAGAGTaGCCAGTCGACTCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LLTQMCKERIHILLLNFLLLSPE*PVDSSA
Trigger: AGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAG...TAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp CAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTTCTGATGAAGTCGACATTCCTTaGCTTCCTTTTCTAGAGTCT +
Preference number: 2 (lower is better)
Translates to: QEGGHRTHFHEGIVRTSDEVDIP*LPFLES
Trigger: AGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTC...ATCAGAAGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR GCA 90 bp GTCTCCTATTGTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATGCTTCCACATGCTTGTaGTGCTCATCAGCTTCAAAA +
Preference number: 2 (lower is better)
Translates to: VSYCGVERSERCTDYILYASTCL*CSSASK
Trigger: TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGC...ATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR GCA 90 bp TGTTATCAGCTTCTGTGTTGCTGTTGGAAGTTCATGCTCTATTGCAGCTTTTTGTTAGCCTTGTCGTTCTaGAGCTTCTCAATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: CYQLLCCCWKFMLYCSFLLALSF*SFSMVS
Trigger: GGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAA...CAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp ACTGATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGATCTCCTATTGTGGAGTaGAACGTTCAGAGCGTTGTA +
Preference number: 2 (lower is better)
Translates to: TDDRIQSLVVISFCVAVGSPIVE*NVQSVV
Trigger: TACAACGCTCTGAACGTTCCACTCCACAATAGGAGA...TCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CCA 90 bp GTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATCATTAAAAGGGTAGTTCTACCCTCTTaGCAAGCTGCAGATTTCGAA +
Preference number: 2 (lower is better)
Translates to: VEWNVQSVVLTIFCIIKRVVLPS*QAADFE
Trigger: TTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTAC...CCTTTTAATGATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR CAA 90 bp AGTAAAAACAGCATAAGGAAACCTACAATATCCATGACATACGTATaGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCAC +
Preference number: 2 (lower is better)
Translates to: SKNSIRKPTISMTYV*FSIYCRHQLLYLPH
Trigger: GTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGTTTCCTTATGCTGTTTTTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR GCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTTTTCTTGTTTTTCTTaGCTCGTGGTTCACTTAGAG +
Preference number: 2 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTFSCFS*LVVHLE
Trigger: CTCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAA...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR-3UTR CAA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGGAAGGATGCGGCGGTTaGCCAGTGCTTCTTCATAAG +
Preference number: 3 (lower is better)
Translates to: GSQHGRGLSPAALCSRSREGCGG*PVLLHK
Trigger: CTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTC...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR GCA 72 bp CCGGGTGAGACCGTCAACCACAGCTTGGTGCTGGGCTaGTTCTGTCTCCAGAGTGGCCAGTCGACTCCTCAG +
Preference number: 3 (lower is better)
Translates to: PGETVNHSLVLG*FCLQSGQSTPQ
Trigger: CTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR CCA 72 bp TCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTaGTGCTGGGCTGCTTCTGTCTCCAGAGTGGCCAGT +
Preference number: 3 (lower is better)
Translates to: SMYFRVRPSTTA*CWAASVSRVAS
Trigger: ACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CAA 90 bp GGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCTCCATGACATACGTATaGTTTTCCATTTACTGCCGA +
Preference number: 3 (lower is better)
Translates to: GLSPAALCSRSRSGKNSRSMTYV*FSIYCR
Trigger: TCGGCAGTAAATGGAAAACAATACGTATGTCATGGA...GCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR-3UTR CAA 90 bp GGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCTTTTCAATTTCACAGTaGTCTCCAAGACAGTCACAG +
Preference number: 3 (lower is better)
Translates to: GLSPAALCSRSRSGKNSRFSISQ*SPRQSQ
Trigger: CTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAA...GCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR GCA 72 bp TTCTGTCTCCAGAGTGGCCAGTCGACTCCTCAGCTCTaGTTCCACATGCTTGTGCTGCTCATCAGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: FCLQSGQSTPQL*FHMLVLLISFK
Trigger: TTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR GCA 72 bp TTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTaGTTCTTCATAAGGCACAGACTCCAAGAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: FSRAEKDAAVCQ*FFIRHRLQEGL
Trigger: AAGCCCCTCTTGGAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
3UTR-3UTR CAA 90 bp CAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTTCTGATACCGTCAACCACAGCTaGGTGCTGGGCTGCTTCTGT +
Preference number: 3 (lower is better)
Translates to: QEGGHRTHFHEGIVRTSDTVNHS*VLGCFC
Trigger: ACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGT...ATCAGAAGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CAA 90 bp AACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGAGCAGCACCAACATTaGTTAACACAGAACTGTAGT +
Preference number: 3 (lower is better)
Translates to: NLLCKAFSTFSRAEKDAAEQHQH*LTQNCS
Trigger: ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC...CGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR TCA 72 bp TTTAGACAGTGCTCGGCACTCGGCATAAAAATGCACTaGCTTACTGTCAGCCAGCTGCAACTGAGACGTAAG +
Preference number: 3 (lower is better)
Translates to: FRQCSALGIKMH*LTVSQLQLRRK
Trigger: CTTACGTCTCAGTTGCAGCTGGCTGACAGTAAGTCAGTGCATTTTTATGCCGAGTGCCGAGCACTGTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CAA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGATCCATGACATACGTATaGTTTTCCATTTACTGCCGA +
Preference number: 3 (lower is better)
Translates to: SLEGSLSLREKEERERERSMTYV*FSIYCR
Trigger: TCGGCAGTAAATGGAAAACAATACGTATGTCATGGA...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR CCA 72 bp GAGATTCCACATCTGGAACCTCACTGTCAGATGTCCTaGTTAAAGTCCCAATTAGACTGGTGCTCTGAATGG +
Preference number: 3 (lower is better)
Translates to: EIPHLEPHCQMS*LKSQLDWCSEW
Trigger: CCATTCAGAGCACCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGGAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR-3UTR CAA 90 bp TCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATACTTTTCTTGTTTTTCTaGCCTCGTGGTTCACTTAGA +
Preference number: 3 (lower is better)
Translates to: STFSRAEKDAAVCQCFFILFLFF*PRGSLR
Trigger: TCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAAG...TATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR-3UTR CAA 90 bp CCACATCTGGAACCTCACTGTCAGATGTCCTGGTTAAAGTCCCAATTAGACTGGTTCTCTAGCTTGATTTaGGCTAATTGTGCTTCCAAC +
Preference number: 3 (lower is better)
Translates to: PHLEPHCQMSWLKSQLDWFSSLI*ANCASN
Trigger: GTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAA...CCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR TCA 72 bp TTCTTGCCTCGTGGTTCACTTAGAGCTAGTTCATCTTaGAGTAGTTCTACCCTCTTGGCAAGCTGCAGATTT +
Preference number: 3 (lower is better)
Translates to: FLPRGSLRASSS*SSSTLLASCRF
Trigger: AAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR-3UTR CAA 90 bp CGTCATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTACTTCTAGTTTAGCCTaGTCGTTCTGCAGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: RHEIHAEQHQHLLTQNCSTSSLA*SFCSFS
Trigger: TGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGT...ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
3UTR TCA 72 bp AATGAATCCACTCGCTGCCTTAGGTCCATAGCTCAGTaGAGCAATGAAGTAGTCCAAATTGTTGCTGAAGAA +
Preference number: 3 (lower is better)
Translates to: NESTRCLRSIAQ*SNEVVQIVAEE
Trigger: TTCTTCAGCAACAATTTGGACTACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
3UTR-3UTR CAA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTCGAAGTCGACATTCCTaGGCTTCCTTTTCTAGAGTC +
Preference number: 3 (lower is better)
Translates to: HTYCFPFTADINFCICLTRSRHS*ASFSRV
Trigger: GACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTCG...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR CCA 72 bp TTAGAGCTAGTTCATCTTGAAGTAGTTCTACCCTCTTaGCAAGCTGCAGATTTCGAAATGTCAAACTGTCCA +
Preference number: 3 (lower is better)
Translates to: LELVHLEVVLPS*QAADFEMSNCP
Trigger: TGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
3UTR GCA 72 bp CAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTaGTGTTGGAAGTTCATGCTCTATTGCAGCTTTTTG +
Preference number: 3 (lower is better)
Translates to: QDTVISCYQLLC*CWKFMLYCSFL
Trigger: CAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
3UTR CCA 72 bp GCACTACCTGTATTCTTCAGCTTATCTGCAATTCGCTaGTTTTCTTTCTCTAGCTTGATTTTGGCTAATTGT +
Preference number: 3 (lower is better)
Translates to: ALPVFFSLSAIR*FSFSSLILANC
Trigger: ACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAATACAGGTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCACTCAGCCGAGGCCATaGCCTCCCCCGCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVTQPRP*PPPPRT
Trigger: TGTACGGGGCGGGGGAGGCCATGGCCTCGGCTGAGT...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGCAGCCAGCATGGACGTaGTCTCAGCCCTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRQPAWT*SQPCGS
Trigger: AGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCAGTATCTGCCTGCTTaGCCACCGCAGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANQYLPA*PPQPPP
Trigger: CGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTG...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTACTCAGCCGAGGCCATaGCCTCCCCCGCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSTQPRP*PPPPRT
Trigger: TGTACGGGGCGGGGGAGGCCATGGCCTCGGCTGAGT...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCAACCACAGCTTGGTaGTGGGCTGCTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRSTTAW*WAASVS
Trigger: GGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGA...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGCTTCTGTCTCCAGAGTaGCCAGTCGACTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRLLSPE*PVDSSA
Trigger: AGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAG...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCCCGTCAACCACAGCTTaGTGCTGGGCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVPSTTA*CWAASV
Trigger: GACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGG...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGCAGCAGGAGCAGGTCTaGAAAGAACAGTCGCCAACC +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRQQEQV*KEQSPT
Trigger: GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTG...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGACAAAAGCCAGGGCCTaGCCAGCAATATCTCGCATC +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRTKARA*PAISRI
Trigger: GATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGT...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANSPAAL*SRSRSG
Trigger: TCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCT...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCAGCCAGCATGGACGTaGTCTCAGCCCTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSQPAWT*SQPCGS
Trigger: AGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCAGCTTCGAGTACTCCTaGGCCAGCTTCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVSFEYS*ASFWYF
Trigger: GAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCT...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGAGCTCTGCTTCCACATaGTTGTGCTGCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRSSAST*LCCSSA
Trigger: AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCT...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CCTGAACAAAAGCCAGGGCCTGCCCAGCAATATCTCGCATCTTCAGCTGGTGTCGTAGCCTCGCTAGCGTaGCTGGGCTGTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PEQKPGPAQQYLASSAGVVASLA*LGCAPG
Trigger: CCCAGGGGCACAGCCCAGGCACGCTAGCGAGGCTAC...GACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCACAGCAGCATTTTCCTaGGCCAGCCCAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTTAAFS*ASPTSW
Trigger: CCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGT...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCGTCACAAGATCCTaGACAAAAGCCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VVSALRLCAAGAGLERTVAVTRS*TKARAC
Trigger: GCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGC...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCAGCTTGGTGCTGGGCTaGTTCTGTCTCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VVSALRLCAAGAGLERTVSLVLG*FCLQSG
Trigger: GCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCT...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACAGCTTGGTGCTGGGCTaGTTCTGTCTCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANSLVLG*FCLQSG
Trigger: GCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCT...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCTTCTGTCTCCAGAGTaGCCAGTCGACTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLSPAALCSRSRSGKNSRLLSPE*PVDSSA
Trigger: AGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAG...GCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCCCATGTACTTCCGGGTaGGACCGTCAACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: VVSALRLCAAGAGLERTVPCTSG*DRQPQL
Trigger: AAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGG...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCTCGACTCCTCAGCTCTaGTTCCACATGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTSTPQL*FHMLVL
Trigger: CAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGA...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTTAGCCTTGTCGTTCTaGAGCTTCTCAATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRLALSF*SFSMVS
Trigger: GGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAA...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCACAAAAGCCAGGGCCTaGCCAGCAATATCTCGCATC +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTTKARA*PAISRI
Trigger: GATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGT...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGACAGTATCTGCCTGCTTaGCCACCGCAGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERQYLPA*PPQPPP
Trigger: CGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTG...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTCCTATTGTGGAGTaGAACGTTCAGAGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRSPIVE*NVQSVV
Trigger: TACAACGCTCTGAACGTTCCACTCCACAATAGGAGA...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCACAGCTCTAGATTCCTaGCTCTTAACGCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVTALDS*LLTQMC
Trigger: GCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGT...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGATCTGGCTCTGTACTTaGCAAGGCAAGAAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRIWLCT*QGKKSY
Trigger: ATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGAT...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCACAGGATCTGAAGTTTaGAGGGCTCCCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTTGSEV*RAPSPS
Trigger: TGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGT...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTAGCTTCGAGTACTCCTaGGCCAGCTTCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSSFEYS*ASFWYF
Trigger: GAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCT...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCCTGGCCAGCAGTATTTaGCACAGCAGCATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTLASSI*HSSIFL
Trigger: CAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAG...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCAATACTTTAGCTTCCTaGAGGCAGCCAGCATGGACG +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTNTLAS*RQPAWT
Trigger: CGTCCATGCTGGCTGCCTTCAGGAAGCTAAAGTATT...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTCTGCCATGTCAGCGTaGGGAGCTCTGTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFSAMSA*GALWTC
Trigger: GCAGGTCCACAGAGCTCCTCACGCTGACATGGCAGA...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR GCA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCGCTTCCACATGCTTGTaGTGCTCATCAGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVASTCL*CSSASK
Trigger: TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGC...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACTCGACTCCTCAGCTCTaGTTCCACATGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANSTPQL*FHMLVL
Trigger: CAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGA...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCGGCGGTTTGCCAGTaGTTCTTCATAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VVSALRLCAAGAGLERTVAAVCQ*FFIRHR
Trigger: TCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGC...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTGCGGCGGTTTGCCAGTaGTTCTTCATAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSAAVCQ*FFIRHR
Trigger: TCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGC...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CCA 90 bp GGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCTGGTGTCTCCTATTGTaGAGTGGAACGTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GLSPAALCSRSRSGKNSRWCLLL*SGTFRA
Trigger: CGCTCTGAACGTTCCACTCCACAATAGGAGACACCA...GCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCACGAGATTCCACATCTaGAACCTCACTGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVTRFHI*NLTVRC
Trigger: ACATCTGACAGTGAGGTTCCAGATGTGGAATCTCGT...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTTCATGCTGCACAGGTaGTCACTCATCATACTTAAC +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRFMLHR*SLIILN
Trigger: GTTAAGTATGATGAGTGACCACCTGTGCAGCATGAA...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTACAGGATCTGAAGTTTaGAGGGCTCCCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSTGSEV*RAPSPS
Trigger: TGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGT...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR CAA 72 bp TTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTaGGTGCTGGGCTGCTTCTGTCTCCAGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FHVLPGETVNHS*VLGCFCLQSGQ
Trigger: CTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACTCAGCCAGCTGCAACTaGGACGTAAGTTCCACTATC +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANSASCN*DVSSTI
Trigger: GATAGTGGAACTTACGTCTCAGTTGCAGCTGGCTGA...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp CACAGCTTGGTGCTGGGCTGCTTCTGTCTCCAGAGTGGCCAGTCGACTCCTCAGTCAGCCAGCTGCAACTaGGACGTAAGTTCCACTATC +
Preference number: 4 (lower is better)
Translates to: HSLVLGCFCLQSGQSTPQSASCN*DVSSTI
Trigger: GATAGTGGAACTTACGTCTCAGTTGCAGCTGGCTGA...CTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTTCAGCCAGCTGCAACTaGGACGTAAGTTCCACTATC +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSSASCN*DVSSTI
Trigger: GATAGTGGAACTTACGTCTCAGTTGCAGCTGGCTGA...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCAATACTTTAGCTTCCTaGAGGCAGCCAGCATGGACG +
Preference number: 4 (lower is better)
Translates to: VVSALRLCAAGAGLERTVNTLAS*RQPAWT
Trigger: CGTCCATGCTGGCTGCCTTCAGGAAGCTAAAGTATT...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp CTGAACAAAAGCCAGGGCCTGCCCAGCAATATCTCGCATCTTCAGCTGGTGTCTCAGGGGGCGCCATCTTaGCTCATGGTCCAAGATGGC +
Preference number: 4 (lower is better)
Translates to: LNKSQGLPSNISHLQLVSQGAPS*LMVQDG
Trigger: GCCATCTTGGACCATGAGTCAAGATGGCGCCCCCTG...AGACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR GCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGGGGTCAGGCAGTATCTaGCTGCTTGGCCACCGCAGC +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKGSGSI*LLGHRS
Trigger: GCTGCGGTGGCCAAGCAGGCAGATACTGCCTGACCC...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACAGCTCTGCTTCCACATaGTTGTGCTGCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANSSAST*LCCSSA
Trigger: AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCT...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCAGCTTGGTGCTGGGCTaGTTCTGTCTCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFSLVLG*FCLQSG
Trigger: GCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCT...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCTGGAACTAGACTGGTaGTCTGAATGGGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSLELDW*SEWAPT
Trigger: TGTTGGAGCCCATTCAGAGCACCAGTCTAGTTCCAG...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281394.8
ENST00000449090.6
CDS-3UTR GCA 90 bp CTCAATGGTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTGGTGCTGCCGAAGCCGAATACGTaGGTGCGTAGCCTCGCTAGC +
Preference number: 4 (lower is better)
Translates to: LNGFHVLPGETVNHSLVLPKPNT*VRSLAS
Trigger: GCTAGCGAGGCTACGCACGCACGTATTCGGCTTCGG...CAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCAAGTCCCAATTAGACTaGTGCTCTGAATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTKSQLD*CSEWAP
Trigger: TGGAGCCCATTCAGAGCACCAGTCTAATTGGGACTT...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCATCTGGAACTAGACTaGTGCTCTGAATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSHLELD*CSEWAP
Trigger: TGGAGCCCATTCAGAGCACCAGTCTAGTTCCAGATG...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281394.8
ENST00000449090.6
CDS-3UTR TCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGCCGTCACAAGATCCTaGACAAAAGCCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRAVTRS*TKARAC
Trigger: GCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGC...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp AACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGAGCTTGGTGCTGGGCTaGTTCTGTCTCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: NLLCKAFSTFSRAEKDAASLVLG*FCLQSG
Trigger: GCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCT...CGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCTCAACCACAGCTTGGTaGTGGGCTGCTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCKAFSTFSRAEKDAAVCSTTAW*WAASVS
Trigger: GGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGA...GCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp GGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCTTAGCCTTGTCGTTCTaGAGCTTCTCAATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLSPAALCSRSRSGKNSRLALSF*SFSMVS
Trigger: GGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAA...GCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACAATGAATCCACTCGCTaGCTTAGGTCCATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANNESTR*LRSIAQ
Trigger: CTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATT...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCTGTTGAACTTGCTGTaGAAGGCCTTCTCGACTTTC +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSLLNLL*KAFSTF
Trigger: GAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAACAG...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp CACAGCTTGGTGCTGGGCTGCTTCTGTCTCCAGAGTGGCCAGTCGACTCCTCAGTCCCAATTAGACTGGTaGTCTGAATGGGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: HSLVLGCFCLQSGQSTPQSQLDW*SEWAPT
Trigger: TGTTGGAGCCCATTCAGAGCACCAGTCTAATTGGGA...CTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCATGTCTCATTCATGCTaGACAGGTGGTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTMSHSC*TGGHSS
Trigger: TGATGAGTGACCACCTGTGCAGCATGAATGAGACAT...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCGTAGTTCTACCCTCTTaGCAAGCTGCAGATTTCGAA +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTVVLPS*QAADFE
Trigger: TTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTAC...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCAAGTCCCAATTAGACTaGTGCTCTGAATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VVSALRLCAAGAGLERTVKSQLD*CSEWAP
Trigger: TGGAGCCCATTCAGAGCACCAGTCTAATTGGGACTT...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR TCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGCCGTCACAAGATCCTaGACAAAAGCCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERAVTRS*TKARAC
Trigger: GCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGC...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp TCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCAGCCGTCACAAGATCCTaGACAAAAGCCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRLSVELRRMRRFASASSAVTRS*TKARAC
Trigger: GCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGC...TGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CACAGCTTGGTGCTGGGCTGCTTCTGTCTCCAGAGTGGCCAGTCGACTCCTCAGGCTTCCACATGCTTGTaGTGCTCATCAGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: HSLVLGCFCLQSGQSTPQASTCL*CSSASK
Trigger: TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGC...CTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp TGGCCAGTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCTCATCAGCTTTCGACTCCTCAGCTCTaGTTCCACATGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: WPVDSSALLPHACAAHQLSTPQL*FHMLVL
Trigger: CAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGA...AAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACTTAGCCTTGTCGTTCTaGAGCTTCTCAATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANLALSF*SFSMVS
Trigger: GGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAA...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGATTCTTCAGCTTATCTaGAATTCGCTGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRILQLI*NSLVFF
Trigger: AAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAAT...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCAGTCTTTTAGACAGTaGTCGGCACTCGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSQSFRQ*SALGIK
Trigger: TTTTATGCCGAGTGCCGAGCACTGTCTAAAAGACTG...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCATAATGTCTCATTCATaGTGCACAGGTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTIMSHS*CTGGHS
Trigger: TGAGTGACCACCTGTGCAGCATGAATGAGACATTAT...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCGGAGCTCTGTGGACCTaGTTGCCCTCTGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: LCKAFSTFSRAEKDAAVCGALWT*LPSAKL
Trigger: CAATTTTGCAGAGGGCAAGCAGGTCCACAGAGCTCC...GCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR CCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTGTAGTTCTACCCTCTTaGCAAGCTGCAGATTTCGAA +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSVVLPS*QAADFE
Trigger: TTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTAC...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGACCGTCAACCACAGCTTaGTGCTGGGCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERPSTTA*CWAASV
Trigger: GACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGG...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCTCTCCTATTGTGGAGTaGAACGTTCAGAGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: VVSALRLCAAGAGLERTVSPIVE*NVQSVV
Trigger: TACAACGCTCTGAACGTTCCACTCCACAATAGGAGA...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAGGCACAGACTCCCGAAGGAGTCCATCTaGCTCTGTACTTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RAEKDAAVCQCFFIRHRLPKESI*LCTWQG
Trigger: GCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGG...GAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp CTCAATGGTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTGGTGCTGGCCAGCCCAACCAGCTaGGCACTACCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: LNGFHVLPGETVNHSLVLASPTS*ALPVFF
Trigger: GAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGC...CAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGCCAGCCCAACCAGCTaGGCACTACCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRASPTS*ALPVFF
Trigger: GAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGC...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGCAGCAGGAGCAGGTCTaGAAAGAACAGTCGCCAACC +
Preference number: 4 (lower is better)
Translates to: NLLCKAFSTFSRAEKDAAQQEQV*KEQSPT
Trigger: GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTG...CGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR TCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGACTAGACTGGTGCTCTaGATGGGCTCCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKTRLVL*MGSNTA
Trigger: GGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAGT...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281394.8
ENST00000449090.6
CDS-3UTR TCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAACTAGACTGGTGCTCTaGATGGGCTCCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERTRLVL*MGSNTA
Trigger: GGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAGT...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281394.8
ENST00000449090.6
CDS-3UTR GCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGATTCTGGTACTTCCCCTaGAACTCAGCCGAGGCCATG +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERFWYFP*NSAEAM
Trigger: CATGGCCTCGGCTGAGTTGCAGGGGAAGTACCAGAA...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp AACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGACAAAAGCCAGGGCCTaGCCAGCAATATCTCGCATC +
Preference number: 4 (lower is better)
Translates to: NLLCKAFSTFSRAEKDAATKARA*PAISRI
Trigger: GATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGT...CGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCATAATGTCTCATTCATaGTGCACAGGTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: VVSALRLCAAGAGLERTVIMSHS*CTGGHS
Trigger: TGAGTGACCACCTGTGCAGCATGAATGAGACATTAT...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACATAATGTCTCATTCATaGTGCACAGGTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANIMSHS*CTGGHS
Trigger: TGAGTGACCACCTGTGCAGCATGAATGAGACATTAT...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTGAAGTCGACATTCCTTaGCTTCCTTTTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSEVDIP*LPFLES
Trigger: AGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTC...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CACAGCTTGGTGCTGGGCTGCTTCTGTCTCCAGAGTGGCCAGTCGACTCCTCAGGAAGTCGACATTCCTTaGCTTCCTTTTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: HSLVLGCFCLQSGQSTPQEVDIP*LPFLES
Trigger: AGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTC...CTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTGGTGTCTCCTATTGTaGAGTGGAACGTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFWCLLL*SGTFRA
Trigger: CGCTCTGAACGTTCCACTCCACAATAGGAGACACCA...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGCCGAAGGAGTCCATCTaGCTCTGTACTTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKPKESI*LCTWQG
Trigger: GCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGG...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GCTTCCTTAGACTTTTCAGCCAAGGCCAGTCTTTTAGACAGTGCTCGGCACTCGCCGAAGGAGTCCATCTaGCTCTGTACTTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ASLDFSAKASLLDSARHSPKESI*LCTWQG
Trigger: GCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGG...CGAGTGCCGAGCACTGTCTAAAAGACTGGCCTTGGCTGAAAAGTCTAAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGCCAGCCCAACCAGCTaGGCACTACCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: GSEVWRAPSPSERKKRERASPTS*ALPVFF
Trigger: GAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGC...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGGCCAGCCCAACCAGCTaGGCACTACCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKASPTS*ALPVFF
Trigger: GAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGC...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGACAGCAGCATTTTCCTaGGCCAGCCCAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSETAAFS*ASPTSW
Trigger: CCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGT...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TTGAACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGACAGCAGCATTTTCCTaGGCCAGCCCAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LNLLCKAFSTFSRAEKDATAAFS*ASPTSW
Trigger: CCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGT...CGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCACTGTCAGATGTCCTaGTTAAAGTCCCAATTAGAC +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANHCQMS*LKSQLD
Trigger: GTCTAATTGGGACTTTAACCAGGACATCTGACAGTG...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTTTCATGCTGCACAGGTaGTCACTCATCATACTTAAC +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSFMLHR*SLIILN
Trigger: GTTAAGTATGATGAGTGACCACCTGTGCAGCATGAA...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAACAGGATCTGAAGTTTaGAGGGCTCCCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRTGSEV*RAPSPS
Trigger: TGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGT...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAAGCTTCGAGTACTCCTaGGCCAGCTTCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERSFEYS*ASFWYF
Trigger: GAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCT...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACAGTCCAAATTGTTGCTaGAGAAGGATGCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANSPNCC*RRMQSF
Trigger: GAAAGATTGCATCCTTCTTCAGCAACAATTTGGACT...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGATTAGACTGGTGCTCTaGATGGGCTCCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKIRLVL*MGSNTA
Trigger: GGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAAT...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR TCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAATTAGACTGGTGCTCTaGATGGGCTCCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERIRLVL*MGSNTA
Trigger: GGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAAT...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGATCGACTCCTCAGCTCTaGTTCCACATGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSEVWRAPSPSERKKRERSTPQL*FHMLVL
Trigger: CAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGA...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGTCAACCACAGCTTGGTaGTGGGCTGCTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSESTTAW*WAASVS
Trigger: GGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGA...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCAATGAATCCACTCGCTaGCTTAGGTCCATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LCKAFSTFSRAEKDAAVCNESTR*LRSIAQ
Trigger: CTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATT...GCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR GCA 90 bp CTCAATGGTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTGGTGCTGAAGGATGCGGCGGTTTaGCAGTGCTTCTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: LNGFHVLPGETVNHSLVLKDAAV*QCFFIR
Trigger: CCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTT...CAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp AGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAGGCACAGACTCGACCTGCTTGCCCTCTaGAAAATTGGCAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RAEKDAAVCQCFFIRHRLDLLAL*KIGKAR
Trigger: TCTTGCCTTGCCAATTTTGCAGAGGGCAAGCAGGTC...GAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR CCA 90 bp CTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCACAGCTCTAGATTCCTaGCTCTTAACGCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: LCKAFSTFSRAEKDAAVCTALDS*LLTQMC
Trigger: GCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGT...GCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGCAGCAGGAGCAGGTCTaGAAAGAACAGTCGCCAACC +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSEQQEQV*KEQSPT
Trigger: GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTG...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGATCAGCCAGCTGCAACTaGGACGTAAGTTCCACTATC +
Preference number: 4 (lower is better)
Translates to: GSEVWRAPSPSERKKRERSASCN*DVSSTI
Trigger: GATAGTGGAACTTACGTCTCAGTTGCAGCTGGCTGA...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTTCCTTCATTTTCAGTTaGTCCTTTAAAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSSFIFS*SFKAAE
Trigger: TTCTGCAGCTTTAAAGGAGCAACTGAAAATGAAGGA...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000449090.6
CDS-3UTR GCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAGCTCTGCTTCCACATaGTTGTGCTGCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKSSAST*LCCSSA
Trigger: AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCT...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CCTGAACAAAAGCCAGGGCCTGCCCAGCAATATCTCGCATCTTCAGCTGGTGTCTTAGCCTTGTCGTTCTaGAGCTTCTCAATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PEQKPGPAQQYLASSAGVLALSF*SFSMVS
Trigger: GGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAA...GACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp TCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAGCGGCGGTTTGCCAGTaGTTCTTCATAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: STFSRAEKDAAVCQCFFIAAVCQ*FFIRHR
Trigger: TCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGC...TATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR GCA 90 bp AACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGCTGTTGAACTTGCTGTaGAAGGCCTTCTCGACTTTC +
Preference number: 4 (lower is better)
Translates to: NLLCKAFSTFSRAEKDAALLNLL*KAFSTF
Trigger: GAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAACAG...CGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR GCA 90 bp GGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCATTCTTCAGCTTATCTaGAATTCGCTGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLSPAALCSRSRSGKNSRILQLI*NSLVFF
Trigger: AAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAAT...GCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGATCCCAATTAGACTGGTaGTCTGAATGGGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRSQLDW*SEWAPT
Trigger: TGTTGGAGCCCATTCAGAGCACCAGTCTAATTGGGA...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGCTGGAACTAGACTGGTaGTCTGAATGGGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKLELDW*SEWAPT
Trigger: TGTTGGAGCCCATTCAGAGCACCAGTCTAGTTCCAG...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281394.8
ENST00000449090.6
CDS-3UTR CCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGATCTCGCATCTTCAGCTaGTGTCTCCTATTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRSRIFS*CLLLWS
Trigger: ACTCCACAATAGGAGACACCAGCTGAAGATGCGAGA...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTGAACTTCTGATTCAATaGAGATATAGTGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSELLIQ*RYSVNG
Trigger: GCCATTGACACTATATCTCCATTGAATCAGAAGTTC...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACGAACTTCTGATTCAATaGAGATATAGTGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SALRLCAAGAGLERTVANELLIQ*RYSVNG
Trigger: GCCATTGACACTATATCTCCATTGAATCAGAAGTTC...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CTCAATGGTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTGGTGCTGAAGTCCCAATTAGACTaGTGCTCTGAATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LNGFHVLPGETVNHSLVLKSQLD*CSEWAP
Trigger: TGGAGCCCATTCAGAGCACCAGTCTAATTGGGACTT...CAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp AGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAGGCACAGACTCAGGTCCATAGCTCAGTaGAGCAATGAAGTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RAEKDAAVCQCFFIRHRLRSIAQ*SNEVVQ
Trigger: TTGGACTACTTCATTGCTTCACTGAGCTATGGACCT...GAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR TCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGGGCATAAAAATGCACTaGCTTACTGTCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKGIKMH*LTVSQL
Trigger: CAGCTGGCTGACAGTAAGTCAGTGCATTTTTATGCC...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGGCATAAAAATGCACTaGCTTACTGTCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSEVWRAPSPSERKKRERGIKMH*LTVSQL
Trigger: CAGCTGGCTGACAGTAAGTCAGTGCATTTTTATGCC...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp AGTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCTCATCAGCTTCAAAAAATACTTTAGCTTCCTaGAGGCAGCCAGCATGGACG +
Preference number: 4 (lower is better)
Translates to: SRLLSSASTCLCCSSASKNTLAS*RQPAWT
Trigger: CGTCCATGCTGGCTGCCTTCAGGAAGCTAAAGTATT...TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR GCA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTATCAGCTTCTGTGTTaGTGTTGGAAGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFYQLLC*CWKFML
Trigger: GAGCATGAACTTCCAACAGCAACACAGAAGCTGATA...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR GCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAAGGATGCGGCGGTTTaGCAGTGCTTCTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSEKDAAV*QCFFIR
Trigger: CCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTT...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp TCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAAGGATGCGGCGGTTTaGCAGTGCTTCTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: STFSRAEKDAAVCQCFFIKDAAV*QCFFIR
Trigger: CCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTT...TATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR GCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGATCCCAATTAGACTGGTaGTCTGAATGGGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERSQLDW*SEWAPT
Trigger: TGTTGGAGCCCATTCAGAGCACCAGTCTAATTGGGA...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGACAGTCTTTTAGACAGTaGTCGGCACTCGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRQSFRQ*SALGIK
Trigger: TTTTATGCCGAGTGCCGAGCACTGTCTAAAAGACTG...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAATGTCTCATTCATGCTaGACAGGTGGTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRMSHSC*TGGHSS
Trigger: TGATGAGTGACCACCTGTGCAGCATGAATGAGACAT...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCATAATGTCTCATTCATaGTGCACAGGTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFIMSHS*CTGGHS
Trigger: TGAGTGACCACCTGTGCAGCATGAATGAGACATTAT...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAAAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: QRERREREREREREKYEQSPAAL*SRSRSG
Trigger: TCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCT...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TCTGTGTTGCTGTTGGAAGTTCATGCTCTATTGCAGCTTTTTGACTATAATGTTCAGTATCTGCCTGCTTaGCCACCGCAGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SVLLLEVHALLQLFDYNVQYLPA*PPQPPP
Trigger: CGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTG...AACATTATAGTCAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR CCA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCGAAGTCGACATTCCTTaGCTTCCTTTTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFEVDIP*LPFLES
Trigger: AGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTC...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp CTCAATGGTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTGGTGCTGTCTCCTATTGTGGAGTaGAACGTTCAGAGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: LNGFHVLPGETVNHSLVLSPIVE*NVQSVV
Trigger: TACAACGCTCTGAACGTTCCACTCCACAATAGGAGA...CAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGATCTCGCATCTTCAGCTaGTGTCTCCTATTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GSEVWRAPSPSERKKRERSRIFS*CLLLWS
Trigger: ACTCCACAATAGGAGACACCAGCTGAAGATGCGAGA...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAACAGCTCTAGATTCCTaGCTCTTAACGCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERTALDS*LLTQMC
Trigger: GCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGT...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCAACAGCTCTAGATTCCTaGCTCTTAACGCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: SRLSVELRRMRRFASASSTALDS*LLTQMC
Trigger: GCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGT...TGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CCA 90 bp AGGTATGAAAGTTTAGAAGAGCCGTCACAAGATCCTGAACAAAAGCCAGGGCCTGCCAGCCCAACCAGCTaGGCACTACCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: RYESLEEPSQDPEQKPGPASPTS*ALPVFF
Trigger: GAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGC...AGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGCTCTTCTAAACTTTCATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp CCTGAACAAAAGCCAGGGCCTGCCCAGCAATATCTCGCATCTTCAGCTGGTGTCCACTGTCAGATGTCCTaGTTAAAGTCCCAATTAGAC +
Preference number: 4 (lower is better)
Translates to: PEQKPGPAQQYLASSAGVHCQMS*LKSQLD
Trigger: GTCTAATTGGGACTTTAACCAGGACATCTGACAGTG...GACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp AGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAGGCACAGACTCACGAGATTCCACATCTaGAACCTCACTGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: RAEKDAAVCQCFFIRHRLTRFHI*NLTVRC
Trigger: ACATCTGACAGTGAGGTTCCAGATGTGGAATCTCGT...GAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGCAGCCAGCATGGACGTaGTCTCAGCCCTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: EESLTVIDILPFEVDIPWQPAWT*SQPCGS
Trigger: AGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR TCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAAGGTCCATAGCTCAGTaGAGCAATGAAGTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERRSIAQ*SNEVVQ
Trigger: TTGGACTACTTCATTGCTTCACTGAGCTATGGACCT...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTGGGTCAGGCAGTATCTaGCTGCTTGGCCACCGCAGC +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTGSGSI*LLGHRS
Trigger: GCTGCGGTGGCCAAGCAGGCAGATACTGCCTGACCC...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGCTTCCACATGCTTGTaGTGCTCATCAGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: SLEGSLSLREKEERERERASTCL*CSSASK
Trigger: TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGC...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCAGCTTCCACATGCTTGTaGTGCTCATCAGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: SRLSVELRRMRRFASASSASTCL*CSSASK
Trigger: TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGC...TGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGATATCAGCTTCTGTGTTaGTGTTGGAAGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRYQLLC*CWKFML
Trigger: GAGCATGAACTTCCAACAGCAACACAGAAGCTGATA...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CCACATCTGGAACCTCACTGTCAGATGTCCTGGTTAAAGTCCCAATTAGACTGGAAGGATGCGGCGGTTTaGCAGTGCTTCTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: PHLEPHCQMSWLKSQLDWKDAAV*QCFFIR
Trigger: CCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTT...CCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGCTGTTGAACTTGCTGTaGAAGGCCTTCTCGACTTTC +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSELLNLL*KAFSTF
Trigger: GAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAACAG...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp GTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATCATTAAAAGGAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VEWNVQSVVLTIFCIIKRSPAAL*SRSRSG
Trigger: TCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCT...CCTTTTAATGATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR GCA 90 bp CATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTTGAGCCGAATACGTGCGTaGGTAGCCTCGCTAGCGTGC +
Preference number: 4 (lower is better)
Translates to: HEIHAEQHQHLLTQNCSLSRIRA*VASLAC
Trigger: GCACGCTAGCGAGGCTACGCACGCACGTATTCGGCT...CAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CCA 90 bp TTATACTGTAGCATGCATTCAGCTGAAAGAGGACTAATGAATCCACTCGCTGCCCTTCTGTCTCCAGAGTaGCCAGTCGACTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LYCSMHSAERGLMNPLAALLSPE*PVDSSA
Trigger: AGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAG...GGCAGCGAGTGGATTCATTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGTCTCCTATTGTGGAGTaGAACGTTCAGAGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKSPIVE*NVQSVV
Trigger: TACAACGCTCTGAACGTTCCACTCCACAATAGGAGA...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AGTTTGTCCGAAGGAGTCCATCTGGCTCTGTACTTGGCAAGGCAAGAAGAGCTATCTCGCATCTTCAGCTaGTGTCTCCTATTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SLSEGVHLALYLARQEELSRIFS*CLLLWS
Trigger: ACTCCACAATAGGAGACACCAGCTGAAGATGCGAGA...TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGACACTGTCAGATGTCCTaGTTAAAGTCCCAATTAGAC +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRHCQMS*LKSQLD
Trigger: GTCTAATTGGGACTTTAACCAGGACATCTGACAGTG...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CCA 90 bp CTTCCTCAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTACAGGATCTGAAGTTTaGAGGGCTCCCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPQEGGHRTHFHEGIVRTTGSEV*RAPSPS
Trigger: TGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGT...AGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR TCA 90 bp CATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTTGGCCGTCACAAGATCCTaGACAAAAGCCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: HEIHAEQHQHLLTQNCSLAVTRS*TKARAC
Trigger: GCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGC...CAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp AGTTTGTCCGAAGGAGTCCATCTGGCTCTGTACTTGGCAAGGCAAGAAGAGCTAAGGTCCATAGCTCAGTaGAGCAATGAAGTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLSEGVHLALYLARQEELRSIAQ*SNEVVQ
Trigger: TTGGACTACTTCATTGCTTCACTGAGCTATGGACCT...TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp CCACATCTGGAACCTCACTGTCAGATGTCCTGGTTAAAGTCCCAATTAGACTGGGGCATAAAAATGCACTaGCTTACTGTCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PHLEPHCQMSWLKSQLDWGIKMH*LTVSQL
Trigger: CAGCTGGCTGACAGTAAGTCAGTGCATTTTTATGCC...CCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGGGGTCAGGCAGTATCTaGCTGCTTGGCCACCGCAGC +
Preference number: 4 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLGSGSI*LLGHRS
Trigger: GCTGCGGTGGCCAAGCAGGCAGATACTGCCTGACCC...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CGTCATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTCAACCACAGCTTGGTaGTGGGCTGCTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RHEIHAEQHQHLLTQNCSSTTAW*WAASVS
Trigger: GGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGA...ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGATATCAGCTTCTGTGTTaGTGTTGGAAGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: GSEVWRAPSPSERKKRERYQLLC*CWKFML
Trigger: GAGCATGAACTTCCAACAGCAACACAGAAGCTGATA...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GCTTCCTTAGACTTTTCAGCCAAGGCCAGTCTTTTAGACAGTGCTCGGCACTCGTATCAGCTTCTGTGTTaGTGTTGGAAGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: ASLDFSAKASLLDSARHSYQLLC*CWKFML
Trigger: GAGCATGAACTTCCAACAGCAACACAGAAGCTGATA...CGAGTGCCGAGCACTGTCTAAAAGACTGGCCTTGGCTGAAAAGTCTAAGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp AGTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCTCATCAGCTTCAAAAATGTCTCATTCATGCTaGACAGGTGGTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: SRLLSSASTCLCCSSASKMSHSC*TGGHSS
Trigger: TGATGAGTGACCACCTGTGCAGCATGAATGAGACAT...TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTAGCCCTGCGGCTCTGTaGAGCAGGAGCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTSPAAL*SRSRSG
Trigger: TCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCT...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAATATCACAGAGTTCTaGTTCTGCCATGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: STFSRAEKDAAVCQCFFINITEF*FCHVSV
Trigger: CACGCTGACATGGCAGAAGCAGAACTCTGTGATATT...TATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR CCA 90 bp AGTTTGTCCGAAGGAGTCCATCTGGCTCTGTACTTGGCAAGGCAAGAAGAGCTAGTAGTTCTACCCTCTTaGCAAGCTGCAGATTTCGAA +
Preference number: 4 (lower is better)
Translates to: SLSEGVHLALYLARQEELVVLPS*QAADFE
Trigger: TTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTAC...TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp CATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTTGCCGTCAACCACAGCTTaGTGCTGGGCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HEIHAEQHQHLLTQNCSLPSTTA*CWAASV
Trigger: GACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGG...CAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp TGGCCAGTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCTCATCAGCTTGAACTTCTGATTCAATaGAGATATAGTGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: WPVDSSALLPHACAAHQLELLIQ*RYSVNG
Trigger: GCCATTGACACTATATCTCCATTGAATCAGAAGTTC...AAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGATCTGGCTCTGTACTTaGCAAGGCAAGAAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSEIWLCT*QGKKSY
Trigger: ATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGAT...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TGGCCAGTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCTCATCAGCTTTTATCTGCAATTCGCTaGTTTTCTTTCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: WPVDSSALLPHACAAHQLLSAIR*FSFSSL
Trigger: CAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAA...AAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAGCTAGTTCATCTTaGAGTAGTTCTACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSERASSS*SSSTLL
Trigger: CAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCT...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAACCATGTACTTCCGGGTaGGACCGTCAACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: QRERREREREREREKYEQPCTSG*DRQPQL
Trigger: AAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGG...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp ACTGATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGACCATGTACTTCCGGGTaGGACCGTCAACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: TDDRIQSLVVISFCVAVGPCTSG*DRQPQL
Trigger: AAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGG...TCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp CAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTTCTGATCTGGCCAGCAGTATTTaGCACAGCAGCATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QEGGHRTHFHEGIVRTSDLASSI*HSSIFL
Trigger: CAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAG...ATCAGAAGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp CGTCATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTATTAGACTGGTGCTCTaGATGGGCTCCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: RHEIHAEQHQHLLTQNCSIRLVL*MGSNTA
Trigger: GGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAAT...ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp GAGCTAGTTCATCTTGAAGTAGTTCTACCCTCTTGGCAAGCTGCAGATTTCGAATCAGCCAGCTGCAACTaGGACGTAAGTTCCACTATC +
Preference number: 4 (lower is better)
Translates to: ELVHLEVVLPSWQAADFESASCN*DVSSTI
Trigger: GATAGTGGAACTTACGTCTCAGTTGCAGCTGGCTGA...TTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR GCA 90 bp CCACATCTGGAACCTCACTGTCAGATGTCCTGGTTAAAGTCCCAATTAGACTGGCAGTCTTTTAGACAGTaGTCGGCACTCGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: PHLEPHCQMSWLKSQLDWQSFRQ*SALGIK
Trigger: TTTTATGCCGAGTGCCGAGCACTGTCTAAAAGACTG...CCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CCACATCTGGAACCTCACTGTCAGATGTCCTGGTTAAAGTCCCAATTAGACTGGATGTCTCATTCATGCTaGACAGGTGGTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: PHLEPHCQMSWLKSQLDWMSHSC*TGGHSS
Trigger: TGATGAGTGACCACCTGTGCAGCATGAATGAGACAT...CCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGGAAGTCGACATTCCTTaGCTTCCTTTTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSEEVDIP*LPFLES
Trigger: AGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTC...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGATTATCTGCAATTCGCTaGTTTTCTTTCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRLSAIR*FSFSSL
Trigger: CAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAA...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTACAGCAGCATTTTCCTaGGCCAGCCCAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTTAAFS*ASPTSW
Trigger: CCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGT...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TTGAACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGTTCATGCTGCACAGGTaGTCACTCATCATACTTAAC +
Preference number: 4 (lower is better)
Translates to: LNLLCKAFSTFSRAEKDAFMLHR*SLIILN
Trigger: GTTAAGTATGATGAGTGACCACCTGTGCAGCATGAA...CGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGCGCCATCTTGACTCATaGTCCAAGATGGCGACCTGG +
Preference number: 4 (lower is better)
Translates to: EESLTVIDILPFEVDIPWRHLDS*SKMATW
Trigger: CCAGGTCGCCATCTTGGACCATGAGTCAAGATGGCG...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431614.5
3UTR CAA 72 bp GAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTGGCTCTGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: EQHQHLLTQNCS*SEGVHLALYLA
Trigger: TGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGAGCTTCGAGTACTCCTaGGCCAGCTTCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: EESLTVIDILPFEVDIPWSFEYS*ASFWYF
Trigger: GAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCT...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR TCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTCCATGTACTTCCGGGTaGGACCGTCAACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTPCTSG*DRQPQL
Trigger: AAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGG...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp AGTTTGTCCGAAGGAGTCCATCTGGCTCTGTACTTGGCAAGGCAAGAAGAGCTAAGTCCAAATTGTTGCTaGAGAAGGATGCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: SLSEGVHLALYLARQEELSPNCC*RRMQSF
Trigger: GAAAGATTGCATCCTTCTTCAGCAACAATTTGGACT...TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGATTTTCTTGTTTTTCTTaGCTCGTGGTTCACTTAGAG +
Preference number: 4 (lower is better)
Translates to: GSEVWRAPSPSERKKRERFSCFS*LVVHLE
Trigger: CTCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAA...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GCTTCCTTAGACTTTTCAGCCAAGGCCAGTCTTTTAGACAGTGCTCGGCACTCGTTTTCTTGTTTTTCTTaGCTCGTGGTTCACTTAGAG +
Preference number: 4 (lower is better)
Translates to: ASLDFSAKASLLDSARHSFSCFS*LVVHLE
Trigger: CTCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAA...CGAGTGCCGAGCACTGTCTAAAAGACTGGCCTTGGCTGAAAAGTCTAAGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR GCA 90 bp CATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTTGACAAAAGCCAGGGCCTaGCCAGCAATATCTCGCATC +
Preference number: 4 (lower is better)
Translates to: HEIHAEQHQHLLTQNCSLTKARA*PAISRI
Trigger: GATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGT...CAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTTGGCGGCGGTTTGCCAGTaGTTCTTCATAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: HEIHAEQHQHLLTQNCSLAAVCQ*FFIRHR
Trigger: TCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGC...CAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CTTCCTCAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTCAGTCTTTTAGACAGTaGTCGGCACTCGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: LPQEGGHRTHFHEGIVRTQSFRQ*SALGIK
Trigger: TTTTATGCCGAGTGCCGAGCACTGTCTAAAAGACTG...AGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp TGTTATCAGCTTCTGTGTTGCTGTTGGAAGTTCATGCTCTATTGCAGCTTTTTGACAGAGTTCTGCTTCTaGCATGTCAGCGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CYQLLCCCWKFMLYCSFLTEFCF*HVSVRS
Trigger: GCTCCTCACGCTGACATGGCAGAAGCAGAACTCTGT...CAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR CCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGTTATCTGCAATTCGCTaGTTTTCTTTCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKLSAIR*FSFSSL
Trigger: CAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAA...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTTACAGCAGCATTTTCCTaGGCCAGCCCAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NISRPFPTLTSLLGPTILTAAFS*ASPTSW
Trigger: CCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGT...AAGTATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTCCATGTACTTCCGGGTaGGACCGTCAACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTPCTSG*DRQPQL
Trigger: AAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGG...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAACTGGCCAGCAGTATTTaGCACAGCAGCATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QRERREREREREREKYEQLASSI*HSSIFL
Trigger: CAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAG...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp GTCTCCTATTGTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATCTGGCCAGCAGTATTTaGCACAGCAGCATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VSYCGVERSERCTDYILYLASSI*HSSIFL
Trigger: CAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAG...ATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTTCTGGTACTTCCCCTaGAACTCAGCCGAGGCCATG +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTFWYFP*NSAEAM
Trigger: CATGGCCTCGGCTGAGTTGCAGGGGAAGTACCAGAA...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGTCCTTCATTTTCAGTTaGTCCTTTAAAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSESFIFS*SFKAAE
Trigger: TTCTGCAGCTTTAAAGGAGCAACTGAAAATGAAGGA...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000449090.6
CDS-3UTR GCA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGTTTTCTTGTTTTTCTTaGCTCGTGGTTCACTTAGAG +
Preference number: 4 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSEFSCFS*LVVHLE
Trigger: CTCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAA...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATAAGCTTGGTGCTGGGCTaGTTCTGTCTCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTISLVLG*FCLQSG
Trigger: GCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCT...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCAACCACAGCTTGGTaGTGGGCTGCTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTSTTAW*WAASVS
Trigger: GGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGA...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGATTCTTCAGCTTATCTaGAATTCGCTGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKILQLI*NSLVFF
Trigger: AAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAAT...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCAATTCTTCAGCTTATCTaGAATTCGCTGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SRLSVELRRMRRFASASSILQLI*NSLVFF
Trigger: AAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAAT...TGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CCACATCTGGAACCTCACTGTCAGATGTCCTGGTTAAAGTCCCAATTAGACTGGAATCCTTGTTTTTCTTaGCTCGTGGTTCACTTAGAG +
Preference number: 4 (lower is better)
Translates to: PHLEPHCQMSWLKSQLDWNPCFS*LVVHLE
Trigger: CTCTAAGTGAACCACGAGGCAAGAAAAACAAGGATT...CCAGTCTAATTGGGACTTTAACCAGGACATCTGACAGTGAGGTTCCAGATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CCA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGCTTCTGTCTCCAGAGTaGCCAGTCGACTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLLLSPE*PVDSSA
Trigger: AGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAG...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACCGTCAACCACAGCTTaGTGCTGGGCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIPSTTA*CWAASV
Trigger: GACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGG...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAATGGTGTCTCCTATTGTaGAGTGGAACGTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: QRERREREREREREKYEQWCLLL*SGTFRA
Trigger: CGCTCTGAACGTTCCACTCCACAATAGGAGACACCA...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AGTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCTCATCAGCTTCAAAAGAACTTCTGATTCAATaGAGATATAGTGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SRLLSSASTCLCCSSASKELLIQ*RYSVNG
Trigger: GCCATTGACACTATATCTCCATTGAATCAGAAGTTC...TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTCCGAAGGAGTCCATCTaGCTCTGTACTTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTPKESI*LCTWQG
Trigger: GCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGG...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTTCCGAAGGAGTCCATCTaGCTCTGTACTTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NISRPFPTLTSLLGPTILPKESI*LCTWQG
Trigger: GCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGG...AAGTATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp TTATACTGTAGCATGCATTCAGCTGAAAGAGGACTAATGAATCCACTCGCTGCCGCTCCTATATCAAAGTaGAAACAGATTGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LYCSMHSAERGLMNPLAAAPISK*KQIGPH
Trigger: GTGAGGACCAATCTGTTTTCACTTTGATATAGGAGC...GGCAGCGAGTGGATTCATTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR GCA 90 bp ATGTTTGGAAATATCTTTCATAACGTCATGAAATCCATGCAGAGCAGCACCAACAGCTCTGCTTCCACATaGTTGTGCTGCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: MFGNIFHNVMKSMQSSTNSSAST*LCCSSA
Trigger: AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCT...GTTGGTGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTCGACTCCTCAGCTCTaGTTCCACATGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLSTPQL*FHMLVL
Trigger: CAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGA...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTTGAATGAATCCACTCGCTaGCTTAGGTCCATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HEIHAEQHQHLLTQNCSLNESTR*LRSIAQ
Trigger: CTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATT...CAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTAAGGATGCGGCGGTTTaGCAGTGCTTCTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTKDAAV*QCFFIR
Trigger: CCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTT...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGCTGTTGAACTTGCTGTaGAAGGCCTTCTCGACTTTC +
Preference number: 4 (lower is better)
Translates to: EESLTVIDILPFEVDIPWLLNLL*KAFSTF
Trigger: GAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAACAG...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTTCTGTCTCCAGAGTaGCCAGTCGACTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTILLSPE*PVDSSA
Trigger: AGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAG...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGACAGCTCTAGATTCCTaGCTCTTAACGCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: EESLTVIDILPFEVDIPWTALDS*LLTQMC
Trigger: GCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGT...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp ACTGATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGACCGAAGGAGTCCATCTaGCTCTGTACCCAAATATCA +
Preference number: 4 (lower is better)
Translates to: TDDRIQSLVVISFCVAVGPKESI*LCTQIS
Trigger: TGATATTTGGGTACAGAGCCAGATGGACTCCTTCGG...TCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR TCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTGGCATAAAAATGCACTaGCTTACTGTCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTGIKMH*LTVSQL
Trigger: CAGCTGGCTGACAGTAAGTCAGTGCATTTTTATGCC...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp AATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTTAGCTCTGCTTCCACATaGTTGTGCTGCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: NISRPFPTLTSLLGPTILSSAST*LCCSSA
Trigger: AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCT...AAGTATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATAACAAAAGCCAGGGCCTaGCCAGCAATATCTCGCATC +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTITKARA*PAISRI
Trigger: GATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGT...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTAATGAATCCACTCGCTaGCTTAGGTCCATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTNESTR*LRSIAQ
Trigger: CTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATT...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATAGCGGCGGTTTGCCAGTaGTTCTTCATAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIAAVCQ*FFIRHR
Trigger: TCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGC...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR GCA 90 bp TCTGTGTTGCTGTTGGAAGTTCATGCTCTATTGCAGCTTTTTGACTATAATGTTCTCTGTGGACCTGCTTaGCCTCTGCAAAATTGGCAA +
Preference number: 4 (lower is better)
Translates to: SVLLLEVHALLQLFDYNVLCGPA*PLQNWQ
Trigger: TTGCCAATTTTGCAGAGGGCAAGCAGGTCCACAGAG...AACATTATAGTCAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR CCA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAATCTCCTATTGTGGAGTaGAACGTTCAGAGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: QRERREREREREREKYEQSPIVE*NVQSVV
Trigger: TACAACGCTCTGAACGTTCCACTCCACAATAGGAGA...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp AATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTTTGGTGTCTCCTATTGTaGAGTGGAACGTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: NISRPFPTLTSLLGPTILWCLLL*SGTFRA
Trigger: CGCTCTGAACGTTCCACTCCACAATAGGAGACACCA...AAGTATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTTCTCGCATCTTCAGCTaGTGTCTCCTATTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTSRIFS*CLLLWS
Trigger: ACTCCACAATAGGAGACACCAGCTGAAGATGCGAGA...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATCATTAAAAGGTCTCGCATCTTCAGCTaGTGTCTCCTATTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VEWNVQSVVLTIFCIIKRSRIFS*CLLLWS
Trigger: ACTCCACAATAGGAGACACCAGCTGAAGATGCGAGA...CCTTTTAATGATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTACAGCTCTAGATTCCTaGCTCTTAACGCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTTALDS*LLTQMC
Trigger: GCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGT...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp ACTGATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGAATCTGGCTCTGTACTTaGCAAGGCAAGAAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: TDDRIQSLVVISFCVAVGIWLCT*QGKKSY
Trigger: ATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGAT...TCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp GTCTCCTATTGTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATACGAGATTCCACATCTaGAACCTCACTGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: VSYCGVERSERCTDYILYTRFHI*NLTVRC
Trigger: ACATCTGACAGTGAGGTTCCAGATGTGGAATCTCGT...ATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp AATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTTCATCTGGAACTAGACTaGTGCTCTGAATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NISRPFPTLTSLLGPTILHLELD*CSEWAP
Trigger: TGGAGCCCATTCAGAGCACCAGTCTAGTTCCAGATG...AAGTATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281394.8
ENST00000449090.6
CDS-3UTR CCA 90 bp GATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGAAGTTGCCCTCTGCAAAATTaGCAAGGCAAGAAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: DDRIQSLVVISFCVAVGSCPLQN*QGKKSY
Trigger: ATAGCTCTTCTTGCCTTGCCAATTTTGCAGAGGGCA...ACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR TCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTGGCCAGCAGTATTTaGCACAGCAGCATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTILASSI*HSSIFL
Trigger: CAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAG...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTGGCATAAAAATGCACTaGCTTACTGTCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTGIKMH*LTVSQL
Trigger: CAGCTGGCTGACAGTAAGTCAGTGCATTTTTATGCC...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGTATCAGCTTCTGTGTTaGTGTTGGAAGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: EESLTVIDILPFEVDIPWYQLLC*CWKFML
Trigger: GAGCATGAACTTCCAACAGCAACACAGAAGCTGATA...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR GCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTATGTCTCATTCATGCTaGACAGGTGGTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTMSHSC*TGGHSS
Trigger: TGATGAGTGACCACCTGTGCAGCATGAATGAGACAT...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGTTCATGCTGCACAGGTaGTCACTCATCATACTTAAC +
Preference number: 4 (lower is better)
Translates to: EESLTVIDILPFEVDIPWFMLHR*SLIILN
Trigger: GTTAAGTATGATGAGTGACCACCTGTGCAGCATGAA...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAAAGTCCAAATTGTTGCTaGAGAAGGATGCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: QRERREREREREREKYEQSPNCC*RRMQSF
Trigger: GAAAGATTGCATCCTTCTTCAGCAACAATTTGGACT...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp ACTGATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGAAGTCCAAATTGTTGCTaGAGAAGGATGCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: TDDRIQSLVVISFCVAVGSPNCC*RRMQSF
Trigger: GAAAGATTGCATCCTTCTTCAGCAACAATTTGGACT...TCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR TCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTAGGTCCATAGCTCAGTaGAGCAATGAAGTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTRSIAQ*SNEVVQ
Trigger: TTGGACTACTTCATTGCTTCACTGAGCTATGGACCT...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGAGGTCCATAGCTCAGTaGAGCAATGAAGTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLRSIAQ*SNEVVQ
Trigger: TTGGACTACTTCATTGCTTCACTGAGCTATGGACCT...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTGCTTCCACATGCTTGTaGTGCTCATCAGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTASTCL*CSSASK
Trigger: TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGC...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATAAATGAATCCACTCGCTaGCTTAGGTCCATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTINESTR*LRSIAQ
Trigger: CTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATT...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CTCTTAACGCAGATGTGCAAAGAGAGGATTCACATTCTTCTTCTAAACTTTTTAAATGAATCCACTCGCTaGCTTAGGTCCATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLTQMCKERIHILLLNFLNESTR*LRSIAQ
Trigger: CTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATT...TAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGGTAGTTCTACCCTCTTaGCAAGCTGCAGATTTCGAA +
Preference number: 4 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLVVLPS*QAADFE
Trigger: TTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTAC...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGATCTGGCTCTGTACTTaGCAAGGCAAGAAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLIWLCT*QGKKSY
Trigger: ATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGAT...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp ATGTTTGGAAATATCTTTCATAACGTCATGAAATCCATGCAGAGCAGCACCAACAGTCCAAATTGTTGCTaGAGAAGGATGCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: MFGNIFHNVMKSMQSSTNSPNCC*RRMQSF
Trigger: GAAAGATTGCATCCTTCTTCAGCAACAATTTGGACT...GTTGGTGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR TCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTAGTCCAAATTGTTGCTaGAGAAGGATGCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTSPNCC*RRMQSF
Trigger: GAAAGATTGCATCCTTCTTCAGCAACAATTTGGACT...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACAGTCTTTTAGACAGTaGTCGGCACTCGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIQSFRQ*SALGIK
Trigger: TTTTATGCCGAGTGCCGAGCACTGTCTAAAAGACTG...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATAGTAGTTCTACCCTCTTaGCAAGCTGCAGATTTCGAA +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIVVLPS*QAADFE
Trigger: TTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTAC...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTGAAGTCGACATTCCTTaGCTTCCTTTTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTEVDIP*LPFLES
Trigger: AGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTC...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp GTCTCCTATTGTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATTTATCTGCAATTCGCTaGTTTTCTTTCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: VSYCGVERSERCTDYILYLSAIR*FSFSSL
Trigger: CAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAA...ATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CCA 90 bp AATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTTTTCATGCTGCACAGGTaGTCACTCATCATACTTAAC +
Preference number: 4 (lower is better)
Translates to: NISRPFPTLTSLLGPTILFMLHR*SLIILN
Trigger: GTTAAGTATGATGAGTGACCACCTGTGCAGCATGAA...AAGTATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR GCA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTTCCTTCATTTTCAGTTaGTCCTTTAAAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: HTYCFPFTADINFCICLTSFIFS*SFKAAE
Trigger: TTCTGCAGCTTTAAAGGAGCAACTGAAAATGAAGGA...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000449090.6
CDS-3UTR GCA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATAATAATGTCTCATTCATaGTGCACAGGTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIIMSHS*CTGGHS
Trigger: TGAGTGACCACCTGTGCAGCATGAATGAGACATTAT...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR TCA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTTTTCCAAACTCTGTTaGACCTTTCTCAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTFSKLC*TFLKDF
Trigger: GAAGTCTTTGAGAAAGGTTCAACAGAGTTTGGAAAA...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449090.6
CDS-3UTR GCA 90 bp TTTTTCTTATACTGTAGCATGCATTCAGCTGAAAGAGGACTAATGAATCCACTCTCCTTCATTTTCAGTTaGTCCTTTAAAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FFLYCSMHSAERGLMNPLSFIFS*SFKAAE
Trigger: TTCTGCAGCTTTAAAGGAGCAACTGAAAATGAAGGA...GAGTGGATTCATTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAAGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR GCA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTTTTCTTGTTTTTCTTaGCTCGTGGTTCACTTAGAG +
Preference number: 4 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLFSCFS*LVVHLE
Trigger: CTCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAA...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CCA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTTATCTGCAATTCGCTaGTTTTCTTTCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLLSAIR*FSFSSL
Trigger: CAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAA...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR CAA 72 bp AGCATAAGGAAACCTACAATATCCATGACATACGTATaGTTTTCCATTTACTGCCGACATCAACTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SIRKPTISMTYV*FSIYCRHQLLY
Trigger: ATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGTTTCCTTATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
3UTR CAA 72 bp TCAGCTTCTGTGTTGCTGTTGGAAGTTCATGCTCTATaGCAGCTTTTTGACTATAATGTTTGGAAATATCTT +
Preference number: 4 (lower is better)
Translates to: SASVLLLEVHAL*QLFDYNVWKYL
Trigger: AAGATATTTCCAAACATTATAGTCAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CCA 90 bp CTCTTAACGCAGATGTGCAAAGAGAGGATTCACATTCTTCTTCTAAACTTTTTAAAAGTGAAAACAGATTaGTCCTCACAGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLTQMCKERIHILLLNFLKVKTD*SSQFSF
Trigger: AAAGCTAAACTGTGAGGACCAATCTGTTTTCACTTT...TAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS GCA 90 bp CCAAACCCAGACACGCTCCCGGGAACGGGTCAGGCAGTATCTGCCTaGTTGGCCACCGCAGCCGCCGCCGCCGCCGCCGCCGCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PNPDTLPGTGQAVSA*LATAAAAAAAAAPP
Trigger: AGGAGGCGCGGCGGCGGCGGCGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTGCCTGACCCGTTCCCGGGAGCGTGTCTGGGTTTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS GCA 90 bp AACGCTCACGGACGCAGACACCGCCCGGCCCCATCTCCTGGGAGCTaGAGGTGGAGGCACCGTAATGGTGGACGGAGACGGCTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: NAHGRRHRPAPSPGS*RWRHRNGGRRRLRG
Trigger: TCCCCTCAGCCGTCTCCGTCCACCATTACGGTGCCTCCACCTGCAGCTCCCAGGAGATGGGGCCGGGCGGTGTCTGCGTCCGTGAGCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421486.1
CDS-3UTR CAA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACGCAGTATCTGCCTGCTaGGCCACCGCAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SALRLCAAGAGLERTVANAVSAC*ATAAAA
Trigger: GGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTGC...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGCAGTATCTGCCTGCTaGGCCACCGCAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRAVSAC*ATAAAA
Trigger: GGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTGC...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGAGCTGGTGTCTCCTATaGTGGAGTGGAACGTTCAGA +
Preference number: 5 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRSWCLL*WSGTFR
Trigger: TCTGAACGTTCCACTCCACAATAGGAGACACCAGCT...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAGCAGTATCTGCCTGCTaGGCCACCGCAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: STFSRAEKDAAVCQCFFIAVSAC*ATAAAA
Trigger: GGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTGC...TATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR CAA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCACTTCTAGTTTAGCCTaGTCGTTCTGCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVTSSLA*SFCSFS
Trigger: TGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGT...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCGCTTCTGTGTTGCTGTaGGAAGTTCATGCTCTATTG +
Preference number: 5 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVASVLL*EVHALL
Trigger: CAATAGAGCATGAACTTCCAACAGCAACACAGAAGC...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCCAAACTCTGTTGAACTaGCTGTGCAAGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTQTLLN*LCKAFS
Trigger: CGAGAAGGCCTTGCACAGCAAGTTCAACAGAGTTTG...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CAA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCCCTGGCCAGCAGTATTaGACACAGCAGCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTPGQQY*TQQHFP
Trigger: AGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGG...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTAGCTGGTGTCTCCTATaGTGGAGTGGAACGTTCAGA +
Preference number: 5 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSSWCLL*WSGTFR
Trigger: TCTGAACGTTCCACTCCACAATAGGAGACACCAGCT...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCCATCTGGCTCTGTACTaGGCAAGGCAAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: VVSALRLCAAGAGLERTVHLALY*ARQEEL
Trigger: TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATG...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCATCTGGCTCTGTACTaGGCAAGGCAAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: RGLSPAALCSRSRSGKNSHLALY*ARQEEL
Trigger: TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATG...ACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTTQNCS*SEGVHL
Trigger: CAGATGGACTCCTTCGGACAAACTACAGTTCTGTGT...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTCTTTCCTGCTCCATTaGTTAATGCCACTACTGATG +
Preference number: 5 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVSFLLH*LMPLLM
Trigger: CATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGA...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCAAACTCTGTTGAACTaGCTGTGCAAGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: SALRLCAAGAGLERTVANQTLLN*LCKAFS
Trigger: CGAGAAGGCCTTGCACAGCAAGTTCAACAGAGTTTG...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CAA 90 bp GGCAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTTCTCTAGCTTGATTTaGGCTAATTGTGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: GSQHGRGLSPAALCSRSRFSSLI*ANCASN
Trigger: GTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAA...CCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCCTGGCCAGCAGTATTaGACACAGCAGCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: SALRLCAAGAGLERTVANPGQQY*TQQHFP
Trigger: AGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGG...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCCCTGGCCAGCAGTATTaGACACAGCAGCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: VVSALRLCAAGAGLERTVPGQQY*TQQHFP
Trigger: AGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGG...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CTCAATGGTTTCCATGTACTTCCGGGTGAGACCGTCAACCACAGCTTGGTGCTGACCGTCAACCACAGCTaGGTGCTGGGCTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LNGFHVLPGETVNHSLVLTVNHS*VLGCFC
Trigger: ACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGT...CAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp CAGCCAGCATGGACGTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTCCATGACATACGTATaGTTTTCCATTTACTGCCGA +
Preference number: 5 (lower is better)
Translates to: QPAWTWSQPCGSVQQEQVSMTYV*FSIYCR
Trigger: TCGGCAGTAAATGGAAAACAATACGTATGTCATGGA...GACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCACGTCCATGCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCGCTCTGTGGACCTGCTaGCCCTCTGCAAAATTGGCA +
Preference number: 5 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFALWTC*PSAKLA
Trigger: TGCCAATTTTGCAGAGGGCAAGCAGGTCCACAGAGC...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS GCA 90 bp TCCGAAGGAGTCCATCTGGCTCTGTACCCAAATATCACAGAGTTCTaGTTCTGCCATGTCAGCGTGAGGAGCTCTGTGGACCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SEGVHLALYPNITEF*FCHVSVRSSVDLLA
Trigger: GGCAAGCAGGTCCACAGAGCTCCTCACGCTGACATGGCAGAAGCAGAACTCTGTGATATTTGGGTACAGAGCCAGATGGACTCCTTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR CAA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAACCGTCAACCACAGCTaGGTGCTGGGCTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GSEVWRAPSPSERKKRERTVNHS*VLGCFC
Trigger: ACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGT...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAACCGTCAACCACAGCTaGGTGCTGGGCTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SLEGSLSLREKEERERERTVNHS*VLGCFC
Trigger: ACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGT...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCGAGCAGCACCAACATTaGTTAACACAGAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: GLSPAALCSRSRSGKNSREQHQH*LTQNCS
Trigger: ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC...GCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCGAGCAGCACCAACATTaGTTAACACAGAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTEQHQH*LTQNCS
Trigger: ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCTTATCAGCTTCTGTGTaGCTGTTGGAAGTTCATGCT +
Preference number: 5 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTLSASV*LLEVHA
Trigger: AGCATGAACTTCCAACAGCAACACAGAAGCTGATAA...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCGAAGGATGCGGCGGTTaGCCAGTGCTTCTTCATAAG +
Preference number: 5 (lower is better)
Translates to: LCKAFSTFSRAEKDAAVCEGCGG*PVLLHK
Trigger: CTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTC...GCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp AGTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCTCATCAGCTTCAAAACCAGGGGGCGCCATCTaGACTCATGGTCCAAGATGG +
Preference number: 5 (lower is better)
Translates to: SRLLSSASTCLCCSSASKPGGAI*THGPRW
Trigger: CCATCTTGGACCATGAGTCAAGATGGCGCCCCCTGG...TTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CAA 90 bp CAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACCCTTTTCTTGTTTTTCTaGCCTCGTGGTTCACTTAGA +
Preference number: 5 (lower is better)
Translates to: QPCGSVQQEQVWKEQSPTLFLFF*PRGSLR
Trigger: TCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAAG...GGTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCGCCAACTCTTTCCTGCTCCATTaGTTAATGCCACTACTGATG +
Preference number: 5 (lower is better)
Translates to: SALRLCAAGAGLERTVANSFLLH*LMPLLM
Trigger: CATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGA...GTTGGCGACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp AGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATAAGGCACAGACTCGAAGGATGCGGCGGTTaGCCAGTGCTTCTTCATAAG +
Preference number: 5 (lower is better)
Translates to: RAEKDAAVCQCFFIRHRLEGCGG*PVLLHK
Trigger: CTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTC...GAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS GCA 90 bp GTTCTGCTTCTGCCATGTCAGCGTGAGGAGCTCTGTGGACCTGCTTaGCCTCTGCAAAATTGGCAAGGCAAGAAGAGCTATGTAAGTCTG +
Preference number: 5 (lower is better)
Translates to: VLLLPCQREELCGPA*PLQNWQGKKSYVSL
Trigger: CAGACTTACATAGCTCTTCTTGCCTTGCCAATTTTGCAGAGGGCAAGCAGGTCCACAGAGCTCCTCACGCTGACATGGCAGAAGCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR CAA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGGAAGGATGCGGCGGTTaGCCAGTGCTTCTTCATAAG +
Preference number: 5 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKEGCGG*PVLLHK
Trigger: CTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTC...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CAA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCTTCTCTAGCTTGATTTaGGCTAATTGTGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: VVSALRLCAAGAGLERTVFSSLI*ANCASN
Trigger: GTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAA...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GTGGTCTCAGCCCTGCGGCTCTGTGCAGCAGGAGCAGGTCTGGAAAGAACAGTCTCCATGACATACGTATaGTTTTCCATTTACTGCCGA +
Preference number: 5 (lower is better)
Translates to: VVSALRLCAAGAGLERTVSMTYV*FSIYCR
Trigger: TCGGCAGTAAATGGAAAACAATACGTATGTCATGGA...GACTGTTCTTTCCAGACCTGCTCCTGCTGCACAGAGCCGCAGGGCTGAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTGCCCTCTGCAAAATaGGCAAGGCAAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFLPSAK*ARQEEL
Trigger: TAGCTCTTCTTGCCTTGCCAATTTTGCAGAGGGCAA...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS CCA 90 bp TGTCAGCGTGAGGAGCTCTGTGGACCTGCTTGCCCTCTGCAAAATTaGCAAGGCAAGAAGAGCTATGTAAGTCTGCAGCTTCTCAAACAC +
Preference number: 5 (lower is better)
Translates to: CQREELCGPACPLQN*QGKKSYVSLQLLKH
Trigger: GTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAATTTTGCAGAGGGCAAGCAGGTCCACAGAGCTCCTCACGCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS-3UTR CAA 90 bp AACTTGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGAGTAGTTCTACCCTCTaGGCAAGCTGCAGATTTCGA +
Preference number: 5 (lower is better)
Translates to: NLLCKAFSTFSRAEKDAASSSTL*ASCRFR
Trigger: TCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACT...CGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp TTGGCAAGGCAAGAAGAGCTATGTAAGTCTGCAGCTTCTCAAACACAGCTGTCAACCGTCAACCACAGCTaGGTGCTGGGCTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LARQEELCKSAASQTQLSTVNHS*VLGCFC
Trigger: ACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGT...TGACAGCTGTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGGAAGGATGCGGCGGTTaGCCAGTGCTTCTTCATAAG +
Preference number: 5 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSEEGCGG*PVLLHK
Trigger: CTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTC...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CAA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGCAAACTCTGTTGAACTaGCTGTGCAAGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKQTLLN*LCKAFS
Trigger: CGAGAAGGCCTTGCACAGCAAGTTCAACAGAGTTTG...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CAA 90 bp TGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTCTTTTCCAAACTCTGTaGAACTTGCTGTGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: CCARPSRLSVELRRMRRFLFQTL*NLLCKA
Trigger: GGCCTTGCACAGCAAGTTCAACAGAGTTTGGAAAAG...AAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS TCA 90 bp CCCTTCCCTTCTCAGCCAGCATTAGAGGCAAGAAGCCAGAATTTCTaGCATCCCAGTCCCAAGCCCGCTACTTCAGTGAAAAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PFPSQPALEARSQNF*HPSPKPATSVKRKN
Trigger: ATTCTTCCTTTTCACTGAAGTAGCGGGCTTGGGACTGGGATGTCAGAAATTCTGGCTTCTTGCCTCTAATGCTGGCTGAGAAGGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421486.1
CDS-3UTR CAA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAAGTAGTTCTACCCTCTaGGCAAGCTGCAGATTTCGA +
Preference number: 5 (lower is better)
Translates to: SLEGSLSLREKEERERERSSSTL*ASCRFR
Trigger: TCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACT...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAGTAGTTCTACCCTCTaGGCAAGCTGCAGATTTCGA +
Preference number: 5 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKSSSTL*ASCRFR
Trigger: TCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACT...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTACTTCTAGTTTAGCCTaGTCGTTCTGCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: CCARPSRLSVELRRMRRFTSSLA*SFCSFS
Trigger: TGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGT...AAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp CCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAACTTCTAGTTTAGCCTaGTCGTTCTGCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PTGSEVWRAPSPSERKKRTSSLA*SFCSFS
Trigger: TGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGT...TCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: GSEVWRAPSPSERKKRERTQNCS*SEGVHL
Trigger: CAGATGGACTCCTTCGGACAAACTACAGTTCTGTGT...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCGAGCAGCACCAACATTaGTTAACACAGAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFEQHQH*LTQNCS
Trigger: ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp GCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTCTTTCCTGCTCCATTaGTTAATGCCACTACTGATG +
Preference number: 5 (lower is better)
Translates to: AFSTFSRAEKDAAVCQCFSFLLH*LMPLLM
Trigger: CATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGA...GAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGACTTTTCCAAACTCTGTaGAACTTGCTGTGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: SLEGSLSLREKEERERERLFQTL*NLLCKA
Trigger: GGCCTTGCACAGCAAGTTCAACAGAGTTTGGAAAAG...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS TCA 90 bp GAAGCCAGAATTTCTGACATCCCAGTCCCAAGCCCGCTACTTCAGTaGAAAGGAAGAATCAAACTCCAGCTTCTCCCTGCAAAAACGCTC +
Preference number: 5 (lower is better)
Translates to: EARISDIPVPSPLLQ*KGRIKLQLLPAKTL
Trigger: GAGCGTTTTTGCAGGGAGAAGCTGGAGTTTGATTCTTCCTTTTCACTGAAGTAGCGGGCTTGGGACTGGGATGTCAGAAATTCTGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421486.1
CDS-3UTR CAA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGACTTCTAGTTTAGCCTaGTCGTTCTGCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKTSSLA*SFCSFS
Trigger: TGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGT...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSETQNCS*SEGVHL
Trigger: CAGATGGACTCCTTCGGACAAACTACAGTTCTGTGT...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGCTTCTGTGTTGCTGTaGGAAGTTCATGCTCTATTG +
Preference number: 5 (lower is better)
Translates to: SLEGSLSLREKEERERERASVLL*EVHALL
Trigger: CAATAGAGCATGAACTTCCAACAGCAACACAGAAGC...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TGCTGTGCAAGGCCTTCTCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTTTATCAGCTTCTGTGTaGCTGTTGGAAGTTCATGCT +
Preference number: 5 (lower is better)
Translates to: CCARPSRLSVELRRMRRFLSASV*LLEVHA
Trigger: AGCATGAACTTCCAACAGCAACACAGAAGCTGATAA...AAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGCTTTTCCAAACTCTGTaGAACTTGCTGTGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSELFQTL*NLLCKA
Trigger: GGCCTTGCACAGCAAGTTCAACAGAGTTTGGAAAAG...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CAA 90 bp AGGTATGAAAGTTTAGAAGAGCCGTCACAAGATCCTGAACAAAAGCCAGGGCCTCATCTGGCTCTGTACTaGGCAAGGCAAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: RYESLEEPSQDPEQKPGPHLALY*ARQEEL
Trigger: TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATG...AGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGCTCTTCTAAACTTTCATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp TCATGCTGCACAGGTGGTCACTCATCATACTTAACTGATCCTCGTAACTCCTCTCATCTGGCTCTGTACTaGGCAAGGCAAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: SCCTGGHSSYLTDPRNSSHLALY*ARQEEL
Trigger: TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATG...AGAGGAGTTACGAGGATCAGTTAAGTATGATGAGTGACCACCTGTGCAGCATGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp GGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGCAGCACCAACATTaGTTAACACAGAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: GSEVWRAPSPSERKKREREQHQH*LTQNCS
Trigger: ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC...TCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGCAGCACCAACATTaGTTAACACAGAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: SLEGSLSLREKEEREREREQHQH*LTQNCS
Trigger: ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GCTTCCTTAGACTTTTCAGCCAAGGCCAGTCTTTTAGACAGTGCTCGGCACTCGGAGCAGCACCAACATTaGTTAACACAGAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: ASLDFSAKASLLDSARHSEQHQH*LTQNCS
Trigger: ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC...CGAGTGCCGAGCACTGTCTAAAAGACTGGCCTTGGCTGAAAAGTCTAAGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGACTTTTCTTGTTTTTCTaGCCTCGTGGTTCACTTAGA +
Preference number: 5 (lower is better)
Translates to: SLEGSLSLREKEERERERLFLFF*PRGSLR
Trigger: TCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAAG...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTACCGTCAACCACAGCTaGGTGCTGGGCTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: HTYCFPFTADINFCICLTTVNHS*VLGCFC
Trigger: ACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGT...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TTGGCAAGGCAAGAAGAGCTATGTAAGTCTGCAGCTTCTCAAACACAGCTGTCACGAAGTCGACATTCCTaGGCTTCCTTTTCTAGAGTC +
Preference number: 5 (lower is better)
Translates to: LARQEELCKSAASQTQLSRSRHS*ASFSRV
Trigger: GACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTCG...TGACAGCTGTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp AGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGAAGAGAGAGAGAGAGAGAGATTTTCAATTTCACAGTaGTCTCCAAGACAGTCACAG +
Preference number: 5 (lower is better)
Translates to: SLEGSLSLREKEERERERFSISQ*SPRQSQ
Trigger: CTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAA...TCTCTCTCTCTCTCTCTCTTCTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TCGACTTTCAGTAGAGCTGAGAAGGATGCGGCGGTTTGCCAGTGCTTCTTCATATTATCAGCTTCTGTGTaGCTGTTGGAAGTTCATGCT +
Preference number: 5 (lower is better)
Translates to: STFSRAEKDAAVCQCFFILSASV*LLEVHA
Trigger: AGCATGAACTTCCAACAGCAACACAGAAGCTGATAA...TATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGTTCTCTAGCTTGATTTaGGCTAATTGTGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKFSSLI*ANCASN
Trigger: GTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAA...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTTCTGATCCTGGCCAGCAGTATTaGACACAGCAGCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: QEGGHRTHFHEGIVRTSDPGQQY*TQQHFP
Trigger: AGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGG...ATCAGAAGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGTTAAAGCTGCAGAATTaGCTTGTTCATCCACAACAC +
Preference number: 5 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSELKLQN*LVHPQH
Trigger: GTGTTGTGGATGAACAAGCAAATTCTGCAGCTTTAA...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CTTCCTCAAGAGGGCGGACATAGGACGCATTTTCATGAAGGTATTGTGAGAACTACTTCTAGTTTAGCCTaGTCGTTCTGCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LPQEGGHRTHFHEGIVRTTSSLA*SFCSFS
Trigger: TGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGT...AGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp AATGATACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGTTTTCAATTTCACAGTaGTCTCCAAGACAGTCACAG +
Preference number: 5 (lower is better)
Translates to: NDTKPTGSEVWRAPSPSEFSISQ*SPRQSQ
Trigger: CTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAA...CTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GTCGACTCCTCAGCTCTGCTTCCACATGCTTGTGCTGCTCATCAGCTTCAAAAATTTTCAATTTCACAGTaGTCTCCAAGACAGTCACAG +
Preference number: 5 (lower is better)
Translates to: VDSSALLPHACAAHQLQKFSISQ*SPRQSQ
Trigger: CTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAA...TTTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp TTATACTGTAGCATGCATTCAGCTGAAAGAGGACTAATGAATCCACTCGCTGCCACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: LYCSMHSAERGLMNPLAATQNCS*SEGVHL
Trigger: CAGATGGACTCCTTCGGACAAACTACAGTTCTGTGT...GGCAGCGAGTGGATTCATTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp GTCTCCTATTGTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATGAAGGATGCGGCGGTTaGCCAGTGCTTCTTCATAAG +
Preference number: 5 (lower is better)
Translates to: VSYCGVERSERCTDYILYEGCGG*PVLLHK
Trigger: CTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTC...ATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp ACTAAACCCACAGGATCTGAAGTTTGGAGGGCTCCCTCTCCCTCAGAGAGAAAGCTTTTCCAAACTCTGTaGAACCTTTCTCAAAGACTT +
Preference number: 5 (lower is better)
Translates to: TKPTGSEVWRAPSPSERKLFQTL*NLSQRL
Trigger: AAGTCTTTGAGAAAGGTTCAACAGAGTTTGGAAAAG...CTTTCTCTCTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449090.6
CDS-3UTR CAA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAAAGCTGGTGTCTCCTATaGTGGAGTGGAACGTTCAGA +
Preference number: 5 (lower is better)
Translates to: QRERREREREREREKYEQSWCLL*WSGTFR
Trigger: TCTGAACGTTCCACTCCACAATAGGAGACACCAGCT...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp GTCTCCTATTGTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATAGCTGGTGTCTCCTATaGTGGAGTGGAACGTTCAGA +
Preference number: 5 (lower is better)
Translates to: VSYCGVERSERCTDYILYSWCLL*WSGTFR
Trigger: TCTGAACGTTCCACTCCACAATAGGAGACACCAGCT...ATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp GATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGAAGTCAAACTCTGTTGAACTaGCTGTGCAAGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: DDRIQSLVVISFCVAVGSQTLLN*LCKAFS
Trigger: CGAGAAGGCCTTGCACAGCAAGTTCAACAGAGTTTG...ACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp ACTGATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGACCTGGCCAGCAGTATTaGACACAGCAGCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: TDDRIQSLVVISFCVAVGPGQQY*TQQHFP
Trigger: AGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGG...TCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS TCA 90 bp TCCTTGTTTTTCTTGCCTCGTGGTTCACTTAGAGCTAGTTCATCTTaGAGTAGTTCTACCCTCTTGGCAAGCTGCAGATTTCGAAATGTC +
Preference number: 5 (lower is better)
Translates to: SLFFLPRGSLRASSS*SSSTLLASCRFRNV
Trigger: GACATTTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAAGAAAAACAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CAA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGCGAAGTCGACATTCCTaGGCTTCCTTTTCTAGAGTC +
Preference number: 5 (lower is better)
Translates to: EESLTVIDILPFEVDIPWRSRHS*ASFSRV
Trigger: GACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTCG...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp ACTGATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGAACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: TDDRIQSLVVISFCVAVGTQNCS*SEGVHL
Trigger: CAGATGGACTCCTTCGGACAAACTACAGTTCTGTGT...TCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAACTTTTCCAAACTCTGTaGAACTTGCTGTGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QRERREREREREREKYEQLFQTL*NLLCKA
Trigger: GGCCTTGCACAGCAAGTTCAACAGAGTTTGGAAAAG...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
CDS-3UTR CAA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTCATCTGGCTCTGTACTaGGCAAGGCAAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTHLALY*ARQEEL
Trigger: TAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATG...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTTGGCTTCTGTGTTGCTGTaGGAAGTTCATGCTCTATTG +
Preference number: 5 (lower is better)
Translates to: HEIHAEQHQHLLTQNCSLASVLL*EVHALL
Trigger: CAATAGAGCATGAACTTCCAACAGCAACACAGAAGC...CAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp GATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGAAGTGCTTCTGTGTTGCTGTaGGAAGTTCATGCTCTATTG +
Preference number: 5 (lower is better)
Translates to: DDRIQSLVVISFCVAVGSASVLL*EVHALL
Trigger: CAATAGAGCATGAACTTCCAACAGCAACACAGAAGC...ACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTCGAAGTCGACATTCCTaGGCTTCCTTTTCTAGAGTC +
Preference number: 5 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTRSRHS*ASFSRV
Trigger: GACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTCG...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CTCTTAACGCAGATGTGCAAAGAGAGGATTCACATTCTTCTTCTAAACTTTTTAAGCTGGTGTCTCCTATaGTGGAGTGGAACGTTCAGA +
Preference number: 5 (lower is better)
Translates to: LLTQMCKERIHILLLNFLSWCLL*WSGTFR
Trigger: TCTGAACGTTCCACTCCACAATAGGAGACACCAGCT...TAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTTQNCS*SEGVHL
Trigger: CAGATGGACTCCTTCGGACAAACTACAGTTCTGTGT...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTATTTGCCTCACTGCTTCTGTGTTGCTGTaGGAAGTTCATGCTCTATTG +
Preference number: 5 (lower is better)
Translates to: HTYCFPFTADINFCICLTASVLL*EVHALL
Trigger: CAATAGAGCATGAACTTCCAACAGCAACACAGAAGC...AGTGAGGCAAATACAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TGTTATCAGCTTCTGTGTTGCTGTTGGAAGTTCATGCTCTATTGCAGCTTTTTGTCTTTCCTGCTCCATTaGTTAATGCCACTACTGATG +
Preference number: 5 (lower is better)
Translates to: CYQLLCCCWKFMLYCSFLSFLLH*LMPLLM
Trigger: CATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGA...CAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp TGTTATCAGCTTCTGTGTTGCTGTTGGAAGTTCATGCTCTATTGCAGCTTTTTGCAATCCTTGTTTTTCTaGCCTCGTGGTTCACTTAGA +
Preference number: 5 (lower is better)
Translates to: CYQLLCCCWKFMLYCSFLQSLFF*PRGSLR
Trigger: TCTAAGTGAACCACGAGGCAAGAAAAACAAGGATTG...CAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CAA 90 bp CAGAGAGAAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGAACAATTAAAGCTGCAGAATTaGCTTGTTCATCCACAACAC +
Preference number: 5 (lower is better)
Translates to: QRERREREREREREKYEQLKLQN*LVHPQH
Trigger: GTGTTGTGGATGAACAAGCAAATTCTGCAGCTTTAA...TTGTTCATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp CTCTTAACGCAGATGTGCAAAGAGAGGATTCACATTCTTCTTCTAAACTTTTTAAGTAGTTCTACCCTCTaGGCAAGCTGCAGATTTCGA +
Preference number: 5 (lower is better)
Translates to: LLTQMCKERIHILLLNFLSSSTL*ASCRFR
Trigger: TCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACT...TAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp GAAGAGTCTTTAACTGTAATTGACATTCTTCCGTTCGAAGTCGACATTCCTTGGCTTTTCTTGTTTTTCTaGCCTCGTGGTTCACTTAGA +
Preference number: 5 (lower is better)
Translates to: EESLTVIDILPFEVDIPWLFLFF*PRGSLR
Trigger: TCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAAG...CCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR CAA 90 bp GATGACAGGATACAGTCATTAGTTGTTATCAGCTTCTGTGTTGCTGTTGGAAGTTTCTCTAGCTTGATTTaGGCTAATTGTGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: DDRIQSLVVISFCVAVGSFSSLI*ANCASN
Trigger: GTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAA...ACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp CGTCATGAAATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTATCATCTTAGAAGCTaGTCTCTTCTATGTGTTCAC +
Preference number: 5 (lower is better)
Translates to: RHEIHAEQHQHLLTQNCSYHLRS*SLLCVH
Trigger: GTGAACACATAGAAGAGACAAGCTTCTAAGATGATA...ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CAA 90 bp GTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATCATTAAAAGGTTTTCAATTTCACAGTaGTCTCCAAGACAGTCACAG +
Preference number: 5 (lower is better)
Translates to: VEWNVQSVVLTIFCIIKRFSISQ*SPRQSQ
Trigger: CTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAA...CCTTTTAATGATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416913.5
ENST00000431614.5
CDS-3UTR CAA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATAGCTTCTGTGTTGCTGTaGGAAGTTCATGCTCTATTG +
Preference number: 5 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIASVLL*EVHALL
Trigger: CAATAGAGCATGAACTTCCAACAGCAACACAGAAGC...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTTATCAGCTTCTGTGTaGCTGTTGGAAGTTCATGCT +
Preference number: 5 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLLSASV*LLEVHA
Trigger: AGCATGAACTTCCAACAGCAACACAGAAGCTGATAA...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp AATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATACTTTTATCAGCTTCTGTGTaGCTGTTGGAAGTTCATGCT +
Preference number: 5 (lower is better)
Translates to: NISRPFPTLTSLLGPTILLSASV*LLEVHA
Trigger: AGCATGAACTTCCAACAGCAACACAGAAGCTGATAA...AAGTATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGTCTTTCCTGCTCCATTaGTTAATGCCACTACTGATG +
Preference number: 5 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLSFLLH*LMPLLM
Trigger: CATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGA...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp TTTTTCTTATACTGTAGCATGCATTCAGCTGAAAGAGGACTAATGAATCCACTCTCTTTCCTGCTCCATTaGTTAATGCCACTACTGATG +
Preference number: 5 (lower is better)
Translates to: FFLYCSMHSAERGLMNPLSFLLH*LMPLLM
Trigger: CATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGA...GAGTGGATTCATTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416913.5
ENST00000431614.5
ENST00000455978.1
CDS-3UTR CAA 90 bp GTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATCATTAAAAGGTCCATGACATACGTATaGTTTTCCATTTACTGCCGA +
Preference number: 5 (lower is better)
Translates to: VEWNVQSVVLTIFCIIKRSMTYV*FSIYCR
Trigger: TCGGCAGTAAATGGAAAACAATACGTATGTCATGGA...CCTTTTAATGATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR CAA 90 bp GTGGAGTGGAACGTTCAGAGCGTTGTACTGACTATATTTTGTATCATTAAAAGGATTCTCAAACAATCCTaGTTTTTCTTGCCTCGTGGT +
Preference number: 5 (lower is better)
Translates to: VEWNVQSVVLTIFCIIKRILKQS*FFLPRG
Trigger: ACCACGAGGCAAGAAAAACAAGGATTGTTTGAGAAT...CCTTTTAATGATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS-3UTR CAA 90 bp ACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTCTGCTTTTCTTGTTTTTCTaGCCTCGTGGTTCACTTAGA +
Preference number: 5 (lower is better)
Translates to: TISMTYVLFSIYCRHQLLLFLFF*PRGSLR
Trigger: TCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAAG...CAGAAGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS-3UTR CAA 90 bp ACCTACAATATCCATGACATACGTATTGTTTTCCATTTACTGCCGACATCAACTTTCTCTAGCTTGATTTaGGCTAATTGTGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: TYNIHDIRIVFHLLPTSTFSSLI*ANCASN
Trigger: GTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAA...AGTTGATGTCGGCAGTAAATGGAAAACAATACGTATGTCATGGATATTGTAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS TCA 90 bp TTCTCAATGACTGATCCTTCATTTTCAGTTGCTCCTATATCAAAGTaGAAACAGATTGGTCCTCACAGTTTAGCTTTAAAGCTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: FSMTDPSFSVAPISK*KQIGPHSLALKLQN
Trigger: ATTCTGCAGCTTTAAAGCTAAACTGTGAGGACCAATCTGTTTTCACTTTGATATAGGAGCAACTGAAAATGAAGGATCAGTCATTGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416913.5
CDS-3UTR CAA 90 bp TTAAATATTTCAAGGCCGTTTCCAACACTGACTAGTTTACTAGGTCCAACAATATTTTCAATTTCACAGTaGTCTCCAAGACAGTCACAG +
Preference number: 5 (lower is better)
Translates to: LNISRPFPTLTSLLGPTIFSISQ*SPRQSQ
Trigger: CTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAA...TATTGTTGGACCTAGTAAACTAGTCAGTGTTGGAAACGGCCTTGAAATATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS CAA 90 bp AACCCAGACACGCTCCCGGGAACGGGTCAGGCAGTATCTGCCTGCTaGGCCACCGCAGCCGCCGCCGCCGCCGCCGCCGCGCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: NPDTLPGTGQAVSAC*ATAAAAAAAAAPPP
Trigger: AGGAGGAGGCGCGGCGGCGGCGGCGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTGCCTGACCCGTTCCCGGGAGCGTGTCTGGGTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281394.8
ENST00000294952.13
ENST00000416913.5
ENST00000449090.6
CDS GCA 72 bp GGACGCAGACACCGCCCGGCCCCATCTCCTGGGAGCTaGAGGTGGAGGCACCGTAATGGTGGACGGAGACGG +
Preference number: 6 (lower is better)
Translates to: GRRHRPAPSPGS*RWRHRNGGRRR
Trigger: CCGTCTCCGTCCACCATTACGGTGCCTCCACCTGCAGCTCCCAGGAGATGGGGCCGGGCGGTGTCTGCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421486.1
CDS GCA 72 bp CGAAGCCGAATACGTGCGTGCGTAGCCTCGCTAGCGTaGCTGGGCTGTGCCCCTGGGACCAGGGGGCGCCAT +
Preference number: 6 (lower is better)
Translates to: RSRIRACVASLA*LGCAPGTRGRH
Trigger: ATGGCGCCCCCTGGTCCCAGGGGCACAGCCCAGGCACGCTAGCGAGGCTACGCACGCACGTATTCGGCTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431614.5
CDS CCA 72 bp AGACACCGCCCGGCCCCATCTCCTGGGAGCTGCAGGTaGAGGCACCGTAATGGTGGACGGAGACGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: RHRPAPSPGSCR*RHRNGGRRRLR
Trigger: CCTCAGCCGTCTCCGTCCACCATTACGGTGCCTCCACCTGCAGCTCCCAGGAGATGGGGCCGGGCGGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421486.1
CDS GCA 72 bp CTGCCATGTCAGCGTGAGGAGCTCTGTGGACCTGCTTaGCCTCTGCAAAATTGGCAAGGCAAGAAGAGCTAT +
Preference number: 6 (lower is better)
Translates to: LPCQREELCGPA*PLQNWQGKKSY
Trigger: ATAGCTCTTCTTGCCTTGCCAATTTTGCAGAGGGCAAGCAGGTCCACAGAGCTCCTCACGCTGACATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS GCA 72 bp GTCCATCTGGCTCTGTACCCAAATATCACAGAGTTCTaGTTCTGCCATGTCAGCGTGAGGAGCTCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: VHLALYPNITEF*FCHVSVRSSVD
Trigger: GTCCACAGAGCTCCTCACGCTGACATGGCAGAAGCAGAACTCTGTGATATTTGGGTACAGAGCCAGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS TCA 72 bp TCACGAGATTCCACATCTGGAACTAGACTGGTGCTCTaGATGGGCTCCAACACAGCCTTAGCTGTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: SRDSTSGTRLVL*MGSNTALAVAS
Trigger: TGAAGCCACAGCTAAGGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAGTTCCAGATGTGGAATCTCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281394.8
ENST00000449090.6
CDS TCA 72 bp CAAATATCACAGAGTTCTGCTTCTGCCATGTCAGCGTaGGGAGCTCTGTGGACCTGCTTGCCCTCTGCAAAA +
Preference number: 6 (lower is better)
Translates to: QISQSSASAMSA*GALWTCLPSAK
Trigger: TTTTGCAGAGGGCAAGCAGGTCCACAGAGCTCCTCACGCTGACATGGCAGAAGCAGAACTCTGTGATATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS TCA 72 bp TCTCAGCCAGCATTAGAGGCAAGAAGCCAGAATTTCTaGCATCCCAGTCCCAAGCCCGCTACTTCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: SQPALEARSQNF*HPSPKPATSVK
Trigger: TTTCACTGAAGTAGCGGGCTTGGGACTGGGATGTCAGAAATTCTGGCTTCTTGCCTCTAATGCTGGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421486.1
CDS TCA 72 bp ATTTCTGACATCCCAGTCCCAAGCCCGCTACTTCAGTaGAAAGGAAGAATCAAACTCCAGCTTCTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: ISDIPVPSPLLQ*KGRIKLQLLPA
Trigger: TGCAGGGAGAAGCTGGAGTTTGATTCTTCCTTTTCACTGAAGTAGCGGGCTTGGGACTGGGATGTCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421486.1
CDS CAA 90 bp ATCCATGCAGAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTGGCTCTGTACCCAAATATCACAGAG +
Preference number: 6 (lower is better)
Translates to: IHAEQHQHLLTQNCS*SEGVHLALYPNITE
Trigger: CTCTGTGATATTTGGGTACAGAGCCAGATGGACTCCTTCGGACAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455978.1
CDS CAA 72 bp GAGCAGCACCAACATTTGTTAACACAGAACTGTAGTTaGTCCGAAGGAGTCCATCTGGCTCTGTACCCAAAT +
Preference number: 6 (lower is better)
Translates to: EQHQHLLTQNCS*SEGVHLALYPN
Trigger: ATTTGGGTACAGAGCCAGATGGACTCCTTCGGACAAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455978.1