Pregenerated sensors for PPP1R1C (Homo sapiens)
Ensembl gene IDs: ENSG00000150722Ensembl transcript IDs: ENST00000280295.7, ENST00000409137.7, ENST00000409702.1, ENST00000461410.1, ENST00000464264.6, ENST00000475249.5, ENST00000479855.1, ENST00000486067.5, ENST00000494189.1, ENST00000495820.5, ENST00000682840.1
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGGAGACTTCCAGGATGTGCATAGCTACTGTATGAGTGTGGGGTaGAGAGATGGAGGATGCTTCTGGAAGTCAAGCAGTGGAATTCCA | + |
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Preference number: 1 (lower is better) Translates to: QGDFQDVHSYCMSVG*RDGGCFWKSSSGIP Trigger: TGGAATTCCACTGCTTGACTTCCAGAAGCATCCTCCATCTCTGCACCCCACACTCATACAGTAGCTATGCACATCCTGGAAGTCTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| 3UTR GCA 90 bp | GATGTGCATAGCTACTGTATGAGTGTGGGGTGCAGAGATGGAGGATaGTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATACTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: DVHSYCMSVGCRDGG*FWKSSSGIPWYTQK Trigger: TTTCTGAGTATACCATGGAATTCCACTGCTTGACTTCCAGAAGCATCCTCCATCTCTGCACCCCACACTCATACAGTAGCTATGCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| 3UTR GCA 90 bp | CATATAATTAGTCTGCTTAGGAAAACACATCCACAGAATATATGCTaGAGGAGAAATGTAACAGGAGACTCACTCATCTACTGCAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: HIISLLRKTHPQNIC*RRNVTGDSLIYCKA Trigger: AGCCTTGCAGTAGATGAGTGAGTCTCCTGTTACATTTCTCCTGCAGCATATATTCTGTGGATGTGTTTTCCTAAGCAGACTAATTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409137.7 |
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| 3UTR GCA 90 bp | CAACATATAATTAGTCTGCTTAGGAAAACACATCCACAGAATATATaGTGCAGGAGAAATGTAACAGGAGACTCACTCATCTACTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: QHIISLLRKTHPQNI*CRRNVTGDSLIYCK Trigger: CTTGCAGTAGATGAGTGAGTCTCCTGTTACATTTCTCCTGCAGCATATATTCTGTGGATGTGTTTTCCTAAGCAGACTAATTATATGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409137.7 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTTGTGGGGTGCAGAGATaGAGGATGCTTCTGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LFCVGIFPSSSRSTALTSCGVQR*RMLLEV Trigger: GACTTCCAGAAGCATCCTCCATCTCTGCACCCCACA...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTTGCATAGCTACTGTATaGGTGTGGGGTGCAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: LFCVGIFPSSSRSTALTSCIATV*VWGAEM Trigger: CATCTCTGCACCCCACACTCATACAGTAGCTATGCA...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAGTGTTTGTTTTGTGTTaGGATTTTTCCAAGCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: KATWHHDGIGGGVCFVLGVFVLC*DFSKLE Trigger: CTCGAGCTTGGAAAAATCCCAACACAAAACAAACAC...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| 3UTR CAA 90 bp | GCAAAGCCATGTTGTACCTTTGCTACTTTTGAGAATAATGGGACTTaGAAGTCAATTAAACTCATTCCTCAGCTTGAAGGGAGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AKPCCTFATFENNGT*KSIKLIPQLEGSSR Trigger: CCTGCTGCTCCCTTCAAGCTGAGGAATGAGTTTAATTGACTTCAAAGTCCCATTATTCTCAAAAGTAGCAAAGGTACAACATGGCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409137.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGCGTTTGTTGGATTATTaGTTCATTTGGGGACACTTA | + |
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Preference number: 2 (lower is better) Translates to: SQLSLISKSICLCFMSELRLLDY*FIWGHL Trigger: TAAGTGTCCCCAAATGAACCAATAATCCAACAAACG...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGAGTGGAAGCGTTTGTTaGATTATTGGTTCATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LASLAKVSAYALCLNWRKSGSVC*IIGSFG Trigger: CCCAAATGAACCAATAATCCAACAAACGCTTCCACT...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| 3UTR-3UTR CCA 90 bp | CAACATATAATTAGTCTGCTTAGGAAAACACATCCACAGAATATATGCTGCAGGGTGTTTGTTTTGTGTTaGGATTTTTCCAAGCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: QHIISLLRKTHPQNICCRVFVLC*DFSKLE Trigger: CTCGAGCTTGGAAAAATCCCAACACAAAACAAACAC...CCTGCAGCATATATTCTGTGGATGTGTTTTCCTAAGCAGACTAATTATATGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409137.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCAAAGAATAAAAGTCTATaGCTCCTAAGGAGGATAGGC | + |
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Preference number: 2 (lower is better) Translates to: KVSAYALCLNWRKFSSKSKNKSL*LLRRIG Trigger: GCCTATCCTCCTTAGGAGCCATAGACTTTTATTCTT...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCACGTTTGTTGGATTATTaGTTCATTTGGGGACACTTA | + |
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Preference number: 2 (lower is better) Translates to: KVSAYALCLNWRKFSSKSRLLDY*FIWGHL Trigger: TAAGTGTCCCCAAATGAACCAATAATCCAACAAACG...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| 3UTR-3UTR CAA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAGAGGTGGTGTTTGTTTaGTGTTGGGATTTTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: KATWHHDGIGGGVCFVLGEVVFV*CWDFSK Trigger: CTTGGAAAAATCCCAACACAAAACAAACACCACCTC...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| 3UTR GCA 72 bp | AGTCTGCTTAGGAAAACACATCCACAGAATATATGCTaGAGGAGAAATGTAACAGGAGACTCACTCATCTAC | + |
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Preference number: 3 (lower is better) Translates to: SLLRKTHPQNIC*RRNVTGDSLIY Trigger: GTAGATGAGTGAGTCTCCTGTTACATTTCTCCTGCAGCATATATTCTGTGGATGTGTTTTCCTAAGCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409137.7 |
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| 3UTR CCA 72 bp | GTGCAGAGATGGAGGATGCTTCTGGAAGTCAAGCAGTaGAATTCCATGGTATACTCAGAAAAGTTAATAGTT | + |
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Preference number: 3 (lower is better) Translates to: VQRWRMLLEVKQ*NSMVYSEKLIV Trigger: AACTATTAACTTTTCTGAGTATACCATGGAATTCCACTGCTTGACTTCCAGAAGCATCCTCCATCTCTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGTGGTGTTTGTTTaGTGTTGGGATTTTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SQLSLISKSICLCFMSELEVVFV*CWDFSK Trigger: CTTGGAAAAATCCCAACACAAAACAAACACCACCTC...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGACCAAAGGGAAGGACTaGGCAAATGGTGTAATAAAA | + |
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Preference number: 3 (lower is better) Translates to: SQLSLISKSICLCFMSELTKGKD*ANGVIK Trigger: TTTTATTACACCATTTGCCAAGTCCTTCCCTTTGGT...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| 3UTR-3UTR CAA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGAGAGGTGGTGTTTGTTTaGTGTTGGGATTTTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: NVFERLPVVREGSDSRIREVVFV*CWDFSK Trigger: CTTGGAAAAATCCCAACACAAAACAAACACCACCTC...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| 3UTR CCA 72 bp | CAAACAGGTCAGAAGCTAGTTAGTGGAAGCGTTTGTTaGATTATTGGTTCATTTGGGGACACTTATTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QTGQKLVSGSVC*IIGSFGDTYFL Trigger: AAGAAAATAAGTGTCCCCAAATGAACCAATAATCCAACAAACGCTTCCACTAACTAGCTTCTGACCTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| 3UTR-3UTR CAA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGAACCAAAGGGAAGGACTaGGCAAATGGTGTAATAAAA | + |
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Preference number: 3 (lower is better) Translates to: NVFERLPVVREGSDSRIRTKGKD*ANGVIK Trigger: TTTTATTACACCATTTGCCAAGTCCTTCCCTTTGGT...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR TCA 90 bp | GGTGCAGAGATGGAGGATGCTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATAGCTTCAGGTGCAATCTaGCTCTGGAATACAGGCACG | + |
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Preference number: 4 (lower is better) Translates to: GAEMEDASGSQAVEFHGIASGAI*LWNTGT Trigger: CGTGCCTGTATTCCAGAGTCAGATTGCACCTGAAGC...TATACCATGGAATTCCACTGCTTGACTTCCAGAAGCATCCTCCATCTCTGCACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGATCCACGGTGATGCCTaGCTTGCCTGTTCCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELIHGDA*LACSPT Trigger: GGTGGGGGAACAGGCAAGCCAGGCATCACCGTGGAT...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| CDS-3UTR CCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGATGTGGGGTGCAGAGATaGAGGATGCTTCTGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGCGVQR*RMLLEV Trigger: GACTTCCAGAAGCATCCTCCATCTCTGCACCCCACA...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| CDS-3UTR GCA 90 bp | GGTGCAGAGATGGAGGATGCTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATACTCTGCTGCTTCAGGTaGAATCTGACTCTGGAATAC | + |
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Preference number: 4 (lower is better) Translates to: GAEMEDASGSQAVEFHGILCCFR*NLTLEY Trigger: GTATTCCAGAGTCAGATTGCACCTGAAGCAGCAGAG...TATACCATGGAATTCCACTGCTTGACTTCCAGAAGCATCCTCCATCTCTGCACC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| CDS-3UTR GCA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCAGCCCAGCTGCTCTGCTaGTTCAGGTGCAATCTGACT | + |
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Preference number: 4 (lower is better) Translates to: SSSRSTALTSQLLVVINSAQLLC*FRCNLT Trigger: AGTCAGATTGCACCTGAAGCAGCAGAGCAGCTGGGC...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280295.7 |
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| CDS-3UTR GCA 90 bp | GAGATGGAGGATGCTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATACTCAGACCTGATCTGCTCTGCTaGTTCAGGTGCAATCTGACT | + |
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Preference number: 4 (lower is better) Translates to: EMEDASGSQAVEFHGILRPDLLC*FRCNLT Trigger: AGTCAGATTGCACCTGAAGCAGCAGAGCAGATCAGG...TCTGAGTATACCATGGAATTCCACTGCTTGACTTCCAGAAGCATCCTCCATCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409702.1 |
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| CDS-3UTR CCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAATTCCCCTTGTGTGTTaGGCCCCCTCTTGTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGIPLVC*APSCHL Trigger: TAGATGACAAGAGGGGGCCCAACACACAAGGGGAAT...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR TCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAGGGGGTTATGCTCATTaGGAATCACAAGTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGGGYAH*ESQVML Trigger: CAGCATCACTTGTGATTCTCAATGAGCATAACCCCC...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR GCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGACTCTGCTGCTTCAGGTaGAATCTGACTCTGGAATAC | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGLCCFR*NLTLEY Trigger: GTATTCCAGAGTCAGATTGCACCTGAAGCAGCAGAG...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR GCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGATTTCCTGATCTGCTCTaGTGCTTCAGGTGCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGFPDLL*CFRCNL Trigger: CAGATTGCACCTGAAGCAGCAGAGCAGATCAGGAAA...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR CCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCAATCCACGGTGATGCCTaGCTTGCCTGTTCCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSIHGDA*LACSPT Trigger: GGTGGGGGAACAGGCAAGCCAGGCATCACCGTGGAT...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| CDS-3UTR CCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAAAGACTAACCCTAAGTaGTGTCCGGGATGTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGKTNPK*CPGCVS Trigger: GGAAACACATCCCGGACACCACTTAGGGTTAGTCTT...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR TCA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCAGAAGATGCCGAGGTTTaGGTAACCCCCTTCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: SSSRSTALTSQLLVVINSEDAEV*VTPFFN Trigger: GTTGAAGAAGGGGGTTACTCAAACCTCGGCATCTTC...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| CDS-3UTR TCA 90 bp | TTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCTCCAGATCGAGCAAGTaGAGATGCCGAGGTTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: FPSSSRSTALTSQLLVVISRSSK*RCRGLS Trigger: ACTCAAACCTCGGCATCTTCACTTGCTCGATCTGGA...GATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| CDS-3UTR TCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGCTTCAGGTGCAATCTaGCTCTGGAATACAGGCACG | + |
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Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELASGAI*LWNTGT Trigger: CGTGCCTGTATTCCAGAGTCAGATTGCACCTGAAGC...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| CDS-3UTR TCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGATTCTTCAGGGAATGCTaGTTCATTCTGGCCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGFFREC*FILAFQ Trigger: CTGAAAGGCCAGAATGAATCAGCATTCCCTGAAGAA...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR GCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTAAAGCCCAGCTGCTCTaGTGCTTCAGGTGCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: LFCVGIFPSSSRSTALTSKAQLL*CFRCNL Trigger: CAGATTGCACCTGAAGCAGCAGAGCAGCTGGGCTTT...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280295.7 |
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| CDS-3UTR GCA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCACCTGATCTGCTCTGCTaGTTCAGGTGCAATCTGACT | + |
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Preference number: 4 (lower is better) Translates to: SSSRSTALTSQLLVVINSPDLLC*FRCNLT Trigger: AGTCAGATTGCACCTGAAGCAGCAGAGCAGATCAGG...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR TCA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGACTTCAACATCCACGGTaGTGCCTGGCTTGCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: NVFERLPVVREGSDSRIRLQHPR*CLACLF Trigger: GAACAGGCAAGCCAGGCATCACCGTGGATGTTGAAG...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
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| CDS-3UTR TCA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCAGGGGGTTATGCTCATTaGGAATCACAAGTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSSRSTALTSQLLVVINSGGYAH*ESQVML Trigger: CAGCATCACTTGTGATTCTCAATGAGCATAACCCCC...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR TCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAGTTGTTCCCTTCCTTTaGTTCATGCAAAGCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGVVPFL*FMQSHV Trigger: AACATGGCTTTGCATGAATCAAAGGAAGGGAACAAC...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409137.7 |
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| CDS-3UTR GCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCACGACAAAAGCCCAGCTaGTCTGCTGCTTCAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSRQKPS*SAASGA Trigger: TGCACCTGAAGCAGCAGAGCAGCTGGGCTTTTGTCG...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280295.7 |
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| CDS-3UTR GCA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGATTCTGGCCTTTCAGATaGTTAACCCCTTTTATGGTG | + |
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Preference number: 4 (lower is better) Translates to: KATWHHDGIGGGVCFVLGFWPFR*LTPFMV Trigger: CACCATAAAAGGGGTTAAGCATCTGAAAGGCCAGAA...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
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| CDS-3UTR TCA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTCCAGATCGAGCAAGTaGAGATGCCGAGGTTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LASLAKVSAYALCLNWRKSRSSK*RCRGLS Trigger: ACTCAAACCTCGGCATCTTCACTTGCTCGATCTGGA...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR TCA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGAGCTTCAGGTGCAATCTaGCTCTGGAATACAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: NVFERLPVVREGSDSRIRASGAI*LWNTGT Trigger: CGTGCCTGTATTCCAGAGTCAGATTGCACCTGAAGC...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGGGGGTTATGCTCATTaGGAATCACAAGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELGGYAH*ESQVML Trigger: CAGCATCACTTGTGATTCTCAATGAGCATAACCCCC...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATACTCAGAAAAGTTAATAGTTGCATAGCTACTGTATaGGTGTGGGGTGCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASGSQAVEFHGILRKVNSCIATV*VWGAEM Trigger: CATCTCTGCACCCCACACTCATACAGTAGCTATGCA...ACTATTAACTTTTCTGAGTATACCATGGAATTCCACTGCTTGACTTCCAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCGATGGAGGATGCTTCTaGAAGTCAAGCAGTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSSRSTALTSQLLVVIDGGCF*KSSSGI Trigger: AATTCCACTGCTTGACTTCCAGAAGCATCCTCCATC...GATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409702.1 |
||
| CDS-3UTR TCA 90 bp | CAACATATAATTAGTCTGCTTAGGAAAACACATCCACAGAATATATGCTGCAGGGAAGATGCCGAGGTTTaGGTAACCCCCTTCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QHIISLLRKTHPQNICCREDAEV*VTPFFN Trigger: GTTGAAGAAGGGGGTTACTCAAACCTCGGCATCTTC...CCTGCAGCATATATTCTGTGGATGTGTTTTCCTAAGCAGACTAATTATATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS-3UTR TCA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTCTTTTCCTGATCTGTaGACGACAAAAGCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LASLAKVSAYALCLNWRKSFPDL*TTKAQL Trigger: CAGCTGGGCTTTTGTCGTTCACAGATCAGGAAAAGA...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000280295.7 |
||
| CDS-3UTR TCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCAACTCATTCCTCAGCTTaGAGGGAGCAGCAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSTHSSA*REQQVE Trigger: TTCTACCTGCTGCTCCCTTCAAGCTGAGGAATGAGT...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCATTCTGGCCTTTCAGATaGTTAACCCCTTTTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSRSTALTSQLLVVINSFWPFR*LTPFMV Trigger: CACCATAAAAGGGGTTAAGCATCTGAAAGGCCAGAA...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATACTCAGAAAAGTTAATAGTAAGACTAACCCTAAGTaGTGTCCGGGATGTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGSQAVEFHGILRKVNSKTNPK*CPGCVS Trigger: GGAAACACATCCCGGACACCACTTAGGGTTAGTCTT...ACTATTAACTTTTCTGAGTATACCATGGAATTCCACTGCTTGACTTCCAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409702.1 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGATTGAGAATCACAAGTaGTGCTGGTGTAGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELIENHK*CWCRSS Trigger: AGAAGACCTACACCAGCATCACTTGTGATTCTCAAT...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | TTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCCTAAGCCACACAGAGTaGTTCGTAATAAATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSSRSTALTSQLLVVILSHTE*FVINSC Trigger: ACAGCTATTTATTACGAAGCACTCTGTGTGGCTTAG...GATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCACTCTGCTGCTTCAGGTaGAATCTGACTCTGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSLCCFR*NLTLEY Trigger: GTATTCCAGAGTCAGATTGCACCTGAAGCAGCAGAG...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGATTTCCTGATCTGCTCTaGTGCTTCAGGTGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVFERLPVVREGSDSRIRFPDLL*CFRCNL Trigger: CAGATTGCACCTGAAGCAGCAGAGCAGATCAGGAAA...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR GCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCACTTCTTTTCCTGATCTaGTCTGCTGCTTCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSLLFLI*SAASGA Trigger: TGCACCTGAAGCAGCAGAGCAGATCAGGAAAAGAAG...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGACTTCTTTTCCTGATCTaGTCTGCTGCTTCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVFERLPVVREGSDSRIRLLFLI*SAASGA Trigger: TGCACCTGAAGCAGCAGAGCAGATCAGGAAAAGAAG...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCAAAGACTAACCCTAAGTaGTGTCCGGGATGTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSKTNPK*CPGCVS Trigger: GGAAACACATCCCGGACACCACTTAGGGTTAGTCTT...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATACTCAGAAAAGTTAATAGTCAAACTGTATCTTTTTaGGACTGTTGGGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ASGSQAVEFHGILRKVNSQTVSF*DCWAPW Trigger: CCATGGAGCCCAACAGTCCCAAAAAGATACAGTTTG...ACTATTAACTTTTCTGAGTATACCATGGAATTCCACTGCTTGACTTCCAGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCTTGTCATCTATTTCTaGGGGGTTATGCTCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFCVGIFPSSSRSTALTSLVIYF*GVMLIE Trigger: CTCAATGAGCATAACCCCCCAGAAATAGATGACAAG...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGCTTGTCATCTATTTCTaGGGGGTTATGCTCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELLVIYF*GVMLIE Trigger: CTCAATGAGCATAACCCCCCAGAAATAGATGACAAG...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCAAATGCTGATTCATTCTaGCCTTTCAGATGCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SSSRSTALTSQLLVVINSNADSF*PFRCLT Trigger: GGTTAAGCATCTGAAAGGCCAGAATGAATCAGCATT...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAATGCTGATTCATTCTaGCCTTTCAGATGCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: FPSSSRSTALTSQLLVVINADSF*PFRCLT Trigger: GGTTAAGCATCTGAAAGGCCAGAATGAATCAGCATT...GATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCTGGAAGTCAAGCAGTaGAATTCCATGGTATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFCVGIFPSSSRSTALTSLEVKQ*NSMVYS Trigger: TGAGTATACCATGGAATTCCACTGCTTGACTTCCAG...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409702.1 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATACTCAGAAAAGTTAATAGTATTGAGAATCACAAGTaGTGCTGGTGTAGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASGSQAVEFHGILRKVNSIENHK*CWCRSS Trigger: AGAAGACCTACACCAGCATCACTTGTGATTCTCAAT...ACTATTAACTTTTCTGAGTATACCATGGAATTCCACTGCTTGACTTCCAGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409702.1 |
||
| CDS-3UTR TCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCATTCTTCAGGGAATGCTaGTTCATTCTGGCCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSFFREC*FILAFQ Trigger: CTGAAAGGCCAGAATGAATCAGCATTCCCTGAAGAA...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR TCA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGATTCTTCAGGGAATGCTaGTTCATTCTGGCCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVFERLPVVREGSDSRIRFFREC*FILAFQ Trigger: CTGAAAGGCCAGAATGAATCAGCATTCCCTGAAGAA...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGCCTATGCTTTATGTCTaGATTGGAGGAAGTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELPMLYV*IGGSLA Trigger: AGCTAAACTTCCTCCAATTCAGACATAAAGCATAGG...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCCTATGCTTTATGTCTaGATTGGAGGAAGTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFCVGIFPSSSRSTALTSPMLYV*IGGSLA Trigger: AGCTAAACTTCCTCCAATTCAGACATAAAGCATAGG...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTCTGGCCTTTCAGATaGTTAACCCCTTTTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LASLAKVSAYALCLNWRKFWPFR*LTPFMV Trigger: CACCATAAAAGGGGTTAAGCATCTGAAAGGCCAGAA...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCAGACTCACTCATCTACTaGAAGGCTTTGAAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSRSTALTSQLLVVINSDSLIY*KALKNV Trigger: AACATTTTTCAAAGCCTTGCAGTAGATGAGTGAGTC...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCACAAACTGTATCTTTTTaGGACTGTTGGGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSQTVSF*DCWAPW Trigger: CCATGGAGCCCAACAGTCCCAAAAAGATACAGTTTG...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTGTGTTTGTTTTGTGTTaGGATTTTTCCAAGCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFCVGIFPSSSRSTALTSVFVLC*DFSKLE Trigger: CTCGAGCTTGGAAAAATCCCAACACAAAACAAACAC...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGTGTTTGTTTTGTGTTaGGATTTTTCCAAGCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELVFVLC*DFSKLE Trigger: CTCGAGCTTGGAAAAATCCCAACACAAAACAAACAC...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGAGTGGAAGCGTTTGTTaGATTATTGGTTCATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELSGSVC*IIGSFG Trigger: CCCAAATGAACCAATAATCCAACAAACGCTTCCACT...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTAGTGGAAGCGTTTGTTaGATTATTGGTTCATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCVGIFPSSSRSTALTSSGSVC*IIGSFG Trigger: CCCAAATGAACCAATAATCCAACAAACGCTTCCACT...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR TCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCAATTGAGAATCACAAGTaGTGCTGGTGTAGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSIENHK*CWCRSS Trigger: AGAAGACCTACACCAGCATCACTTGTGATTCTCAAT...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTTCTACTGCAAGGCTTTaGAAAATGTTGGTATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFCVGIFPSSSRSTALTSSTARL*KMLVSV Trigger: TACAGATACCAACATTTTTCAAAGCCTTGCAGTAGA...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGCTCCACATTGCACAATaGAAGAAAACAAGGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SQLSLISKSICLCFMSELLHIAQ*KKTRRL Trigger: TAATCTCCTTGTTTTCTTTCATTGTGCAATGTGGAG...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGCTAAGCCACACAGAGTaGTTCGTAATAAATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LASLAKVSAYALCLNWRKLSHTE*FVINSC Trigger: ACAGCTATTTATTACGAAGCACTCTGTGTGGCTTAG...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCAAAAAGTATCTGCCTATaGTTTATGTCTGAATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSRSTALTSQLLVVINSKSICL*FMSELE Trigger: CTCCAATTCAGACATAAAGCATAGGCAGATACTTTT...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGAAGAATAAAAGTCTATaGCTCCTAAGGAGGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LASLAKVSAYALCLNWRKKNKSL*LLRRIG Trigger: GCCTATCCTCCTTAGGAGCCATAGACTTTTATTCTT...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTAAAAGTATCTGCCTATaGTTTATGTCTGAATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFCVGIFPSSSRSTALTSKSICL*FMSELE Trigger: CTCCAATTCAGACATAAAGCATAGGCAGATACTTTT...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR GCA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGATCCAAGAAGCCTTCTTaGTGCAGACCAGTAATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NVFERLPVVREGSDSRIRSKKPS*CRPVIN Trigger: ATTAATTACTGGTCTGCAGCAAGAAGGCTTCTTGGA...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCAAATGCTGATTCATTCTaGCCTTTCAGATGCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: KVSAYALCLNWRKFSSKSNADSF*PFRCLT Trigger: GGTTAAGCATCTGAAAGGCCAGAATGAATCAGCATT...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGAGTGTTTGTTTTGTGTTaGGATTTTTCCAAGCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVFERLPVVREGSDSRIRVFVLC*DFSKLE Trigger: CTCGAGCTTGGAAAAATCCCAACACAAAACAAACAC...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CCA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGCGTTTGTTGGATTATTaGTTCATTTGGGGACACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LASLAKVSAYALCLNWRKRLLDY*FIWGHL Trigger: TAAGTGTCCCCAAATGAACCAATAATCCAACAAACG...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGGCTTTATGTCTGAATTaGAGGAAGTTTAGCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LASLAKVSAYALCLNWRKALCLN*RKFSSK Trigger: CTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGC...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CCA 90 bp | CAACATATAATTAGTCTGCTTAGGAAAACACATCCACAGAATATATGCTGCAGGGCTTTATGTCTGAATTaGAGGAAGTTTAGCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHIISLLRKTHPQNICCRALCLN*RKFSSK Trigger: CTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGC...CCTGCAGCATATATTCTGTGGATGTGTTTTCCTAAGCAGACTAATTATATGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS TCA 90 bp | TGTGAACGACAAAAGCCCAGCTGCTCTGCTGCTTCAGGTGCAATCTaGCTCTGGAATACAGGCACGGCAAACTGTATCTTTTTGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: CERQKPSCSAASGAI*LWNTGTANCIFLGL Trigger: CAGTCCCAAAAAGATACAGTTTGCCGTGCCTGTATTCCAGAGTCAGATTGCACCTGAAGCAGCAGAGCAGCTGGGCTTTTGTCGTTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280295.7 |
||
| CDS TCA 90 bp | CCGACCAGCCATGATTCACCACTCATGACAACCCGAAACAGTACCTaGACAGTACCTTTTATGGTGGGTGGTGTGTACACACTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTSHDSPLMTTRNST*TVPFMVGGVYTLCF Trigger: GAAGCAGAGTGTGTACACACCACCCACCATAAAAGGTACTGTTCAGGTACTGTTTCGGGTTGTCATGAGTGGTGAATCATGGCTGGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461410.1 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCACGGTGATGCCTGGCTaGCCTGTTCCCCCACCAATC | + |
|
Preference number: 5 (lower is better) Translates to: FPSSSRSTALTSQLLVVITVMPG*PVPPPI Trigger: GATTGGTGGGGGAACAGGCAAGCCAGGCATCACCGT...GATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGAGATGGAGGATGCTTCTGGAAGTCAAGCAGTGGAATTCCATGGTATAAATTCCCCTTGTGTGTaGGGCCCCCTCTTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GAEMEDASGSQAVEFHGINSPCV*GPLLSS Trigger: AGATGACAAGAGGGGGCCCAACACACAAGGGGAATT...TATACCATGGAATTCCACTGCTTGACTTCCAGAAGCATCCTCCATCTCTGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409702.1 |
||
| CDS TCA 90 bp | TATCATCAGATATGTGGTCCTAGAGAACAGACGGCCGACCAGCCATaGTTCACCACTCATGACAACCCGAAACAGTACCTGAACAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: YHQICGPREQTADQP*FTTHDNPKQYLNST Trigger: GGTACTGTTCAGGTACTGTTTCGGGTTGTCATGAGTGGTGAATCATGGCTGGTCGGCCGTCTGTTCTCTAGGACCACATATCTGATGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461410.1 |
||
| CDS GCA 90 bp | CCTCTGTGGAAGGCCTCCACTCAGTTTGTTTCTCATTACTCAGCTTaGTGGCCGCCAGGAAGTTTCTTGAATGAGGAGATTGTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLWKASTQFVSHYSA*WPPGSFLNEEIVLL Trigger: AAGCAGAACAATCTCCTCATTCAAGAAACTTCCTGGCGGCCAGCAAGCTGAGTAATGAGAAACAAACTGAGTGGAGGCCTTCCACAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494189.1 |
||
| CDS-3UTR CAA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAAATTCCCCTTGTGTGTaGGGCCCCCTCTTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: KATWHHDGIGGGVCFVLGNSPCV*GPLLSS Trigger: AGATGACAAGAGGGGGCCCAACACACAAGGGGAATT...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS TCA 90 bp | GTAGGTCTTCTTTTCCTGATCTGCTCTGCTGCTTCAGGTGCAATCTaGCTCTGGAATACAGGCACGGCAAACTGTATCTTTTTGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VGLLFLICSAASGAI*LWNTGTANCIFLGL Trigger: CAGTCCCAAAAAGATACAGTTTGCCGTGCCTGTATTCCAGAGTCAGATTGCACCTGAAGCAGCAGAGCAGATCAGGAAAAGAAGACCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000409137.7 ENST00000409702.1 ENST00000682840.1 |
||
| CDS CCA 90 bp | CATGACAACCCGAAACAGTACCTGAACAGTACCTTTTATGGTGGGTaGTGTGTACACACTCTGCTTCCTTTGCTTAGGGGATGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HDNPKQYLNSTFYGG*CVHTLLPLLRGCIL Trigger: CAGAATGCATCCCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCCACCATAAAAGGTACTGTTCAGGTACTGTTTCGGGTTGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461410.1 |
||
| CDS CCA 90 bp | CTGTGGAAGGCCTCCACTCAGTTTGTTTCTCATTACTCAGCTTGCTaGCCGCCAGGAAGTTTCTTGAATGAGGAGATTGTTCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWKASTQFVSHYSAC*PPGSFLNEEIVLLF Trigger: GAAAAGCAGAACAATCTCCTCATTCAAGAAACTTCCTGGCGGCCAGCAAGCTGAGTAATGAGAAACAAACTGAGTGGAGGCCTTCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494189.1 |
||
| CDS-3UTR CAA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGACGGTGATGCCTGGCTaGCCTGTTCCCCCACCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LASLAKVSAYALCLNWRKTVMPG*PVPPPI Trigger: GATTGGTGGGGGAACAGGCAAGCCAGGCATCACCGT...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS TCA 90 bp | TGTTTCTCATTACTCAGCTTGCTGGCCGCCAGGAAGTTTCTTGAATaGGGAGATTGTTCTGCTTTTCATCCTCTGCTTGACCTGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: CFSLLSLLAARKFLE*GDCSAFHPLLDLRT Trigger: TGTCCTCAGGTCAAGCAGAGGATGAAAAGCAGAACAATCTCCTCATTCAAGAAACTTCCTGGCGGCCAGCAAGCTGAGTAATGAGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494189.1 |
||
| CDS TCA 90 bp | ACAGAGTGCTTCGTAATAAATAGCTGTAATTCCAGATCGAGCAAGTaGAGATGCCGAGGTTTGAGTAACCCCCTTCTTCAACATCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: TECFVINSCNSRSSK*RCRGLSNPLLQHPR Trigger: CCGTGGATGTTGAAGAAGGGGGTTACTCAAACCTCGGCATCTTCACTTGCTCGATCTGGAATTACAGCTATTTATTACGAAGCACTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000682840.1 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCCACACTCTGCTTCCTTaGCTTAGGGGATGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPSSSRSTALTSQLLVVIHTLLP*LRGCIL Trigger: CAGAATGCATCCCCTAAGCAAAGGAAGCAGAGTGTG...GATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CAA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCACACACTCTGCTTCCTTaGCTTAGGGGATGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSRSTALTSQLLVVINSHTLLP*LRGCIL Trigger: CAGAATGCATCCCCTAAGCAAAGGAAGCAGAGTGTG...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS GCA 90 bp | CATCCTCTGCTTGACCTGAGGACATGCAGTTTACACTCTGAGCTTTaGAACTGTTTTGCTCTGACCCTGCTTTTCTATCAGATTTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: HPLLDLRTCSLHSEL*NCFALTLLFYQIYH Trigger: ATGGTAAATCTGATAGAAAAGCAGGGTCAGAGCAAAACAGTTGCAAAGCTCAGAGTGTAAACTGCATGTCCTCAGGTCAAGCAGAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494189.1 |
||
| CDS CCA 90 bp | CGTCTCTTAACTCTTGATCAGATATCAGAGGTTTCTGAAGTTTCTTaGTTCGTGGCTCTCCAAGGTCTCGGTACATTTTTCACTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLTLDQISEVSEVS*FVALQGLGTFFTVS Trigger: GGACACAGTGAAAAATGTACCGAGACCTTGGAGAGCCACGAACCAAGAAACTTCAGAAACCTCTGATATCTGATCAAGAGTTAAGAGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000475249.5 ENST00000486067.5 ENST00000495820.5 |
||
| CDS-3UTR CAA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCACACTCTGCTTCCTTaGCTTAGGGGATGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFCVGIFPSSSRSTALTSHTLLP*LRGCIL Trigger: CAGAATGCATCCCCTAAGCAAAGGAAGCAGAGTGTG...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CAA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAGCGTTTGTTGGATTATaGGTTCATTTGGGGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: KATWHHDGIGGGVCFVLGAFVGL*VHLGTL Trigger: AAGTGTCCCCAAATGAACCAATAATCCAACAAACGC...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS TCA 90 bp | TTCTTGAATGAGGAGATTGTTCTGCTTTTCATCCTCTGCTTGACCTaGGGACATGCAGTTTACACTCTGAGCTTTGCAACTGTTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLNEEIVLLFILCLT*GHAVYTLSFATVLL Trigger: GAGCAAAACAGTTGCAAAGCTCAGAGTGTAAACTGCATGTCCTCAGGTCAAGCAGAGGATGAAAAGCAGAACAATCTCCTCATTCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494189.1 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCTTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGCAAACTGTATCTTTTaGGGACTGTTGGGCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SQLSLISKSICLCFMSELANCIF*GLLGSM Trigger: CATGGAGCCCAACAGTCCCAAAAAGATACAGTTTGC...CAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CAA 90 bp | AAAGCAACGTGGCATCATGATGGAATCGGAGGTGGTGTTTGTTTTGTGTTGGGAACCAAAGGGAAGGACTaGGCAAATGGTGTAATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KATWHHDGIGGGVCFVLGTKGKD*ANGVIK Trigger: TTTTATTACACCATTTGCCAAGTCCTTCCCTTTGGT...TCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTATCTTTTTGGGACTGTaGGGCTCCATGGTAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: LFCVGIFPSSSRSTALTSIFLGL*GSMVMM Trigger: CATCATTACCATGGAGCCCAACAGTCCCAAAAAGAT...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCGAGGTGGTGTTTGTTTaGTGTTGGGATTTTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPSSSRSTALTSQLLVVIEVVFV*CWDFSK Trigger: CTTGGAAAAATCCCAACACAAAACAAACACCACCTC...GATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CAA 90 bp | AGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCAACTCAGAGGTGGTGTTTGTTTaGTGTTGGGATTTTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSRSTALTSQLLVVINSEVVFV*CWDFSK Trigger: CTTGGAAAAATCCCAACACAAAACAAACACCACCTC...TGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTCAACTTCTGGTTGTTATCGCGTTTGTTGGATTATaGGTTCATTTGGGGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: FPSSSRSTALTSQLLVVIAFVGL*VHLGTL Trigger: AAGTGTCCCCAAATGAACCAATAATCCAACAAACGC...GATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CAA 90 bp | CAACATATAATTAGTCTGCTTAGGAAAACACATCCACAGAATATATGCTGCAGGAACTCATTCCTCAGCTaGAAGGGAGCAGCAGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QHIISLLRKTHPQNICCRNSFLS*KGAAGR Trigger: TCTACCTGCTGCTCCCTTCAAGCTGAGGAATGAGTT...CCTGCAGCATATATTCTGTGGATGTGTTTTCCTAAGCAGACTAATTATATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS-3UTR CAA 90 bp | TTGTTTTGTGTTGGGATTTTTCCAAGCTCGAGTAGAAGCACAGCACTAACAAGTTGTTGTTCCCTTCCTTaGATTCATGCAAAGCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LFCVGIFPSSSRSTALTSCCSLP*IHAKPC Trigger: ACATGGCTTTGCATGAATCAAAGGAAGGGAACAACA...ACTTGTTAGTGCTGTGCTTCTACTCGAGCTTGGAAAAATCCCAACACAAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGAATCTTTTTGGGACTGTaGGGCTCCATGGTAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: NVFERLPVVREGSDSRIRIFLGL*GSMVMM Trigger: CATCATTACCATGGAGCCCAACAGTCCCAAAAAGAT...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000409702.1 |
||
| CDS-3UTR CAA 90 bp | AAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGTTTAGCTCTAAGTCAGAGGTGGTGTTTGTTTaGTGTTGGGATTTTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KVSAYALCLNWRKFSSKSEVVFV*CWDFSK Trigger: CTTGGAAAAATCCCAACACAAAACAAACACCACCTC...TGACTTAGAGCTAAACTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CAA 90 bp | TTAGCCTCATTAGCAAAAGTATCTGCCTATGCTTTATGTCTGAATTGGAGGAAGACCAAAGGGAAGGACTaGGCAAATGGTGTAATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LASLAKVSAYALCLNWRKTKGKD*ANGVIK Trigger: TTTTATTACACCATTTGCCAAGTCCTTCCCTTTGGT...CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280295.7 ENST00000409137.7 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTTGAAAGACTCCCTGTTGTAAGAGAAGGCTCAGATTCCAGAATTAGAAGCCATGTTGTACCTTaGCTACTTTTGAGAATAATG | + |
|
Preference number: 5 (lower is better) Translates to: NVFERLPVVREGSDSRIRSHVVP*LLLRIM Trigger: CATTATTCTCAAAAGTAGCAAAGGTACAACATGGCT...TCTAATTCTGGAATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409137.7 |
||
| CDS TCA 72 bp | CGAGGTTTGAGTAACCCCCTTCTTCAACATCCACGGTaGTGCCTGGCTTGCCTGTTCCCCCACCAATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGLSNPLLQHPR*CLACLFPHQSL Trigger: AAGGGATTGGTGGGGGAACAGGCAAGCCAGGCATCACCGTGGATGTTGAAGAAGGGGGTTACTCAAACCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000682840.1 |
||
| CDS CCA 72 bp | TTTAAATTACTTCGCGGTGCTCTTAGACTTCACTGCTaGAGGGGGTCGGGGGAATGTATGTGGAGGTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FKLLRGALRLHC*RGSGECMWRSG Trigger: CCCCGACCTCCACATACATTCCCCCGACCCCCTCCAGCAGTGAAGTCTAAGAGCACCGCGAAGTAATTTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000495820.5 |
||
| CDS CCA 72 bp | CCCTTGTGTGTTGGGCCCCCTCTTGTCATCTATTTCTaGGAAATCGGGTCACTCCCACCCGAATATTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PLCVGPPLVIYF*EIGSLPPEYCA Trigger: AGCACAATATTCGGGTGGGAGTGACCCGATTTCCCAGAAATAGATGACAAGAGGGGGCCCAACACACAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479855.1 |
||
| CDS TCA 72 bp | ATATGTGGTCCTAGAGAACAGACGGCCGACCAGCCATaGTTCACCACTCATGACAACCCGAAACAGTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: ICGPREQTADQP*FTTHDNPKQYL Trigger: CAGGTACTGTTTCGGGTTGTCATGAGTGGTGAATCATGGCTGGTCGGCCGTCTGTTCTCTAGGACCACATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461410.1 |
||
| CDS CAA 72 bp | GCATTCTGTAATTCCCCTTGTGTGTTGGGCCCCCTCTaGTCATCTATTTCTGGGAAATCGGGTCACTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AFCNSPCVLGPL*SSISGKSGHSH Trigger: GTGGGAGTGACCCGATTTCCCAGAAATAGATGACAAGAGGGGGCCCAACACACAAGGGGAATTACAGAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479855.1 |
||
| CDS TCA 72 bp | GTAATTCCAGATCGAGCAAGTGAAGATGCCGAGGTTTaGGTAACCCCCTTCTTCAACATCCACGGTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: VIPDRASEDAEV*VTPFFNIHGDA Trigger: GGCATCACCGTGGATGTTGAAGAAGGGGGTTACTCAAACCTCGGCATCTTCACTTGCTCGATCTGGAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000682840.1 |
||
| CDS GCA 72 bp | AAATTTAAATTACTTCGCGGTGCTCTTAGACTTCACTaGTGGAGGGGGTCGGGGGAATGTATGTGGAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: KFKLLRGALRLH*WRGSGECMWRS Trigger: CGACCTCCACATACATTCCCCCGACCCCCTCCAGCAGTGAAGTCTAAGAGCACCGCGAAGTAATTTAAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000495820.5 |
||
| CDS CCA 72 bp | CAGAGATGTGAAGAGCTCAGAAAGACTAACCCTAAGTaGTGTCCGGGATGTGTTTCCTCAGACACACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QRCEELRKTNPK*CPGCVSSDTLH Trigger: GTGGAGTGTGTCTGAGGAAACACATCCCGGACACCACTTAGGGTTAGTCTTTCTGAGCTCTTCACATCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000682840.1 |
||
| CDS TCA 72 bp | AGAACAGACGGCCGACCAGCCATGATTCACCACTCATaGCAACCCGAAACAGTACCTGAACAGTACCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RTDGRPAMIHHS*QPETVPEQYLL Trigger: TAAAAGGTACTGTTCAGGTACTGTTTCGGGTTGTCATGAGTGGTGAATCATGGCTGGTCGGCCGTCTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461410.1 |
||
| CDS CCA 72 bp | CCGAAACAGTACCTGAACAGTACCTTTTATGGTGGGTaGTGTGTACACACTCTGCTTCCTTTGCTTAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PKQYLNSTFYGG*CVHTLLPLLRG Trigger: TCCCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCCACCATAAAAGGTACTGTTCAGGTACTGTTTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461410.1 |
||
| CDS TCA 72 bp | CTTTTCCTGATCTGCTCTGCTGCTTCAGGTGCAATCTaGCTCTGGAATACAGGCACGGCAAACTGTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LFLICSAASGAI*LWNTGTANCIF Trigger: AAAGATACAGTTTGCCGTGCCTGTATTCCAGAGTCAGATTGCACCTGAAGCAGCAGAGCAGATCAGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000409137.7 ENST00000409702.1 ENST00000682840.1 |
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| CDS TCA 72 bp | TTACTCAGCTTGCTGGCCGCCAGGAAGTTTCTTGAATaGGGAGATTGTTCTGCTTTTCATCCTCTGCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLSLLAARKFLE*GDCSAFHPLLD Trigger: GTCAAGCAGAGGATGAAAAGCAGAACAATCTCCTCATTCAAGAAACTTCCTGGCGGCCAGCAAGCTGAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494189.1 |
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| CDS TCA 72 bp | CTCATTACTCAGCTTGCTGGCCGCCAGGAAGTTTCTTaGATGAGGAGATTGTTCTGCTTTTCATCCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LITQLAGRQEVS*MRRLFCFSSSA Trigger: AGCAGAGGATGAAAAGCAGAACAATCTCCTCATTCAAGAAACTTCCTGGCGGCCAGCAAGCTGAGTAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494189.1 |
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| CDS GCA 72 bp | AAGGCCTCCACTCAGTTTGTTTCTCATTACTCAGCTTaGTGGCCGCCAGGAAGTTTCTTGAATGAGGAGATT | + |
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Preference number: 6 (lower is better) Translates to: KASTQFVSHYSA*WPPGSFLNEEI Trigger: AATCTCCTCATTCAAGAAACTTCCTGGCGGCCAGCAAGCTGAGTAATGAGAAACAAACTGAGTGGAGGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494189.1 |
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| CDS TCA 72 bp | CATGATTCACCACTCATGACAACCCGAAACAGTACCTaGACAGTACCTTTTATGGTGGGTGGTGTGTACACA | + |
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Preference number: 6 (lower is better) Translates to: HDSPLMTTRNST*TVPFMVGGVYT Trigger: TGTGTACACACCACCCACCATAAAAGGTACTGTTCAGGTACTGTTTCGGGTTGTCATGAGTGGTGAATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461410.1 |
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| CDS TCA 72 bp | GAGGAGATTGTTCTGCTTTTCATCCTCTGCTTGACCTaGGGACATGCAGTTTACACTCTGAGCTTTGCAACT | + |
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Preference number: 6 (lower is better) Translates to: EEIVLLFILCLT*GHAVYTLSFAT Trigger: AGTTGCAAAGCTCAGAGTGTAAACTGCATGTCCTCAGGTCAAGCAGAGGATGAAAAGCAGAACAATCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494189.1 |
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| CDS GCA 72 bp | CTTGACCTGAGGACATGCAGTTTACACTCTGAGCTTTaGAACTGTTTTGCTCTGACCCTGCTTTTCTATCAG | + |
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Preference number: 6 (lower is better) Translates to: LDLRTCSLHSEL*NCFALTLLFYQ Trigger: CTGATAGAAAAGCAGGGTCAGAGCAAAACAGTTGCAAAGCTCAGAGTGTAAACTGCATGTCCTCAGGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494189.1 |
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| CDS CCA 72 bp | ACTCTTGATCAGATATCAGAGGTTTCTGAAGTTTCTTaGTTCGTGGCTCTCCAAGGTCTCGGTACATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TLDQISEVSEVS*FVALQGLGTFF Trigger: GAAAAATGTACCGAGACCTTGGAGAGCCACGAACCAAGAAACTTCAGAAACCTCTGATATCTGATCAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000464264.6 ENST00000475249.5 ENST00000486067.5 ENST00000495820.5 |
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| CDS CCA 72 bp | ATCAGATATCAGAGGTTTCTGAAGTTTCTTGGTTCGTaGCTCTCCAAGGTCTCGGTACATTTTTCACTGTGT | + |
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Preference number: 6 (lower is better) Translates to: IRYQRFLKFLGS*LSKVSVHFSLC Trigger: ACACAGTGAAAAATGTACCGAGACCTTGGAGAGCCACGAACCAAGAAACTTCAGAAACCTCTGATATCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000475249.5 ENST00000486067.5 ENST00000495820.5 |
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| CDS TCA 72 bp | TTCGTAATAAATAGCTGTAATTCCAGATCGAGCAAGTaGAGATGCCGAGGTTTGAGTAACCCCCTTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: FVINSCNSRSSK*RCRGLSNPLLQ Trigger: TTGAAGAAGGGGGTTACTCAAACCTCGGCATCTTCACTTGCTCGATCTGGAATTACAGCTATTTATTACGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280295.7 ENST00000409137.7 ENST00000682840.1 |
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| CDS TCA 72 bp | GCAGTTTACACTCTGAGCTTTGCAACTGTTTTGCTCTaGCCCTGCTTTTCTATCAGATTTACCATTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: AVYTLSFATVLL*PCFSIRFTIVH Trigger: GTGAACAATGGTAAATCTGATAGAAAAGCAGGGTCAGAGCAAAACAGTTGCAAAGCTCAGAGTGTAAACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494189.1 |
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