RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R1B (Homo sapiens)

Ensembl gene IDs: ENSG00000131771

Ensembl transcript IDs: ENST00000254079.9, ENST00000394265.5, ENST00000394267.2, ENST00000492037.5, ENST00000579000.5, ENST00000580029.1, ENST00000580772.1, ENST00000580825.5, ENST00000582680.5, ENST00000583446.5

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCGCTGGGTGAATaGAGGAATGACTGGCAGGGGTGGGCATCAGGCAGCAAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: FSNVGCLTSHLPLGE*RNDWQGWASGSKCP
Trigger: TGGGCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGTGAGACAGCCCACATTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR CCA 90 bp ATGACTGGCAGGGGTGGGCATCAGGCAGCAAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGGCAAACAAGCAAACACAGACCAGCC +
Preference number: 1 (lower is better)
Translates to: MTGRGGHQAASAQVL*VSAKGGQTSKHRPA
Trigger: GGCTGGTCTGTGTTTGCTTGTTTGCCCACCTTTGGCTGATACCCAGAGAACCTGGGCACTTGCTGCCTGATGCCCACCCCTGCCAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR GCA 90 bp GGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCAGGCAGCAAGTaGCCAGGTTCTCTGGGTATCAGCCAAAGGTGGGCAAACAAGCAA +
Preference number: 1 (lower is better)
Translates to: GEWRNDWQGWASGSK*PGSLGISQRWANKQ
Trigger: TTGCTTGTTTGCCCACCTTTGGCTGATACCCAGAGAACCTGGGCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATTCCTCCATTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR CCA 90 bp TTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCGCTaGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCAGGCAGCA +
Preference number: 1 (lower is better)
Translates to: FLDFPMWAVSHPTSR*VNGGMTGRGGHQAA
Trigger: TGCTGCCTGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHDRVGF*GTAMSP
Trigger: AGGGGACATCGCTGTTCCCCAGAAACCCACTCTATC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
3UTR-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACAGGGTGAGGATAGAGTaGGTTTCTGGGGAACAGCGA +
Preference number: 2 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHRVRIE*VSGEQR
Trigger: TCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCT...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
3UTR-3UTR CCA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAAGGGTGAGGATAGAGTaGGTTTCTGGGGAACAGCGA +
Preference number: 2 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGERVRIE*VSGEQR
Trigger: TCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCT...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR GCA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCGCATCAGGCAGCAAGTaGCCAGGTTCTCTGGGTATC +
Preference number: 2 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPASGSK*PGSLGI
Trigger: GATACCCAGAGAACCTGGGCACTTGCTGCCTGATGC...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLSAQVL*VSAKGG
Trigger: CCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAATGACTGGCAGGGGTaGGCATCAGGCAGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSNDWQG*ASGSKC
Trigger: GCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATT...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACAATGACTGGCAGGGGTaGGCATCAGGCAGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHNDWQG*ASGSKC
Trigger: GCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATT...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCAATGACTGGCAGGGGTaGGCATCAGGCAGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: AFLASKHKTQQRGLCQSINDWQG*ASGSKC
Trigger: GCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATT...GATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR GCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACCAGATCTTAGGGTCCTaGCCTGTGGGTCTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHQILGS*PVGLLC
Trigger: ACACAGGAGACCCACAGGGCAGGACCCTAAGATCTG...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHSAQVL*VSAKGG
Trigger: CCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHSAQVL*VSAKGG
Trigger: CCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTAATGACTGGCAGGGGTaGGCATCAGGCAGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLNDWQG*ASGSKC
Trigger: GCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATT...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCATCCCACCTCCCGCTaGGTGAATGGAGGAATGACT +
Preference number: 2 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHHPTSR*VNGGMT
Trigger: AGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATG...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR GCA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCGCATCAGGCAGCAAGTaGCCAGGTTCTCTGGGTATC +
Preference number: 2 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFASGSK*PGSLGI
Trigger: GATACCCAGAGAACCTGGGCACTTGCTGCCTGATGC...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR GCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTGCATCAGGCAGCAAGTaGCCAGGTTCTCTGGGTATC +
Preference number: 2 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSASGSK*PGSLGI
Trigger: GATACCCAGAGAACCTGGGCACTTGCTGCCTGATGC...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR GCA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGATCTTAGGGTCCTaGCCTGTGGGTCTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFQILGS*PVGLLC
Trigger: ACACAGGAGACCCACAGGGCAGGACCCTAAGATCTG...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHDRVGF*GTAMSP
Trigger: AGGGGACATCGCTGTTCCCCAGAAACCCACTCTATC...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHDRVGF*GTAMSP
Trigger: AGGGGACATCGCTGTTCCCCAGAAACCCACTCTATC...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSDRVGF*GTAMSP
Trigger: AGGGGACATCGCTGTTCCCCAGAAACCCACTCTATC...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCAGGGTGAGGATAGAGTaGGTTTCTGGGGAACAGCGA +
Preference number: 2 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSRVRIE*VSGEQR
Trigger: TCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCT...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAAGGGTGAGGATAGAGTaGGTTTCTGGGGAACAGCGA +
Preference number: 2 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPRVRIE*VSGEQR
Trigger: TCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCT...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCGGTATCAGCCAAAGGTaGGCAAACAAGCAAACACAG +
Preference number: 2 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPGISQR*ANKQTQ
Trigger: CTGTGTTTGCTTGTTTGCCCACCTTTGGCTGATACC...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLSAQVL*VSAKGG
Trigger: CCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTCATCCCACCTCCCGCTaGGTGAATGGAGGAATGACT +
Preference number: 2 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLHPTSR*VNGGMT
Trigger: AGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATG...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp ACCCTGGTAGAAGCCGGTGAGAGAAGTGGTGACTTGGAATCCTCCATAGGAAAGCTGGATTTTCCAATGTaGGCTGTCTCACATCCCACC +
Preference number: 2 (lower is better)
Translates to: TLVEAGERSGDLESSIGKLDFPM*AVSHPT
Trigger: GGTGGGATGTGAGACAGCCCACATTGGAAAATCCAG...CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR TCA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCTGGGGAGTAGAATTGTaGAGGGCAAATCCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSWGVEL*RANPCS
Trigger: GGAACAGGGATTTGCCCTTCACAATTCTACTCCCCA...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR TCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCATGGGGAGTAGAATTGTaGAGGGCAAATCCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPWGVEL*RANPCS
Trigger: GGAACAGGGATTTGCCCTTCACAATTCTACTCCCCA...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR TCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCACAGGAGGAGCAAGGGTaGTTAAGGGAAGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPQEEQG*LREDSQ
Trigger: TTGGGAATCTTCCCTTAATCACCCTTGCTCCTCCTG...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLDRVGF*GTAMSP
Trigger: AGGGGACATCGCTGTTCCCCAGAAACCCACTCTATC...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GAAGATTCCCAAAATGTTGAGGCTATGGAGAAAAACGCCTTAGTCCTGGACCCTCATCCCACCTCCCGCTaGGTGAATGGAGGAATGACT +
Preference number: 2 (lower is better)
Translates to: EDSQNVEAMEKNALVLDPHPTSR*VNGGMT
Trigger: AGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATG...AGGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCCTGGATTTTCCAATGTaGGCTGTCTCACATCCCACC +
Preference number: 2 (lower is better)
Translates to: AFLASKHKTQQRGLCQSILDFPM*AVSHPT
Trigger: GGTGGGATGTGAGACAGCCCACATTGGAAAATCCAG...GATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR TCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCAGGAGGAGCAAGGGTaGTTAAGGGAAGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSQEEQG*LREDSQ
Trigger: TTGGGAATCTTCCCTTAATCACCCTTGCTCCTCCTG...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATGGTATCAGCCAAAGGTaGGCAAACAAGCAAACACAG +
Preference number: 2 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHGISQR*ANKQTQ
Trigger: CTGTGTTTGCTTGTTTGCCCACCTTTGGCTGATACC...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCGGTATCAGCCAAAGGTaGGCAAACAAGCAAACACAG +
Preference number: 2 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSGISQR*ANKQTQ
Trigger: CTGTGTTTGCTTGTTTGCCCACCTTTGGCTGATACC...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTGGTATCAGCCAAAGGTaGGCAAACAAGCAAACACAG +
Preference number: 2 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSGISQR*ANKQTQ
Trigger: CTGTGTTTGCTTGTTTGCCCACCTTTGGCTGATACC...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR CCA 72 bp CTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTaGGCATCAGGCAGCAAGTGCCCAGGTTCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: LPLGEWRNDWQG*ASGSKCPGSLG
Trigger: ACCCAGAGAACCTGGGCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR GCA 72 bp GTTCTCAGGACCTCCTTTCCCCAGATCTTAGGGTCCTaGCCTGTGGGTCTCCTGTGTCCAGGGGAGAGGATC +
Preference number: 3 (lower is better)
Translates to: VLRTSFPQILGS*PVGLLCPGERI
Trigger: GATCCTCTCCCCTGGACACAGGAGACCCACAGGGCAGGACCCTAAGATCTGGGGAAAGGAGGTCCTGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR CCA 72 bp AAGAGCACAAAACAGGGTGAGGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCTCCACTTCCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: KSTKQGEDRVGF*GTAMSPPLPPG
Trigger: CCCAGGAGGAAGTGGAGGGGACATCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCTGTTTTGTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
3UTR-3UTR CAA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACGAGAGAAGTGGTGACTaGGAATCCTCCATAGGAAAG +
Preference number: 3 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHERSGD*ESSIGK
Trigger: CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTC...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CAA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGAGAGAAGTGGTGACTaGGAATCCTCCATAGGAAAG +
Preference number: 3 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPERSGD*ESSIGK
Trigger: CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTC...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR TCA 72 bp GGAGCAAGGGTGATTAAGGGAAGATTCCCAAAATGTTaGGGCTATGGAGAAAAACGCCTTAGTCCTGGACCC +
Preference number: 3 (lower is better)
Translates to: GARVIKGRFPKC*GYGEKRLSPGP
Trigger: GGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTCCCTTAATCACCCTTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR CCA 72 bp AGAATTGTGAAGGGCAAATCCCTGTTCCCGGTTTTCTaGATTTTCCAATGTGGGCTGTCTCACATCCCACCT +
Preference number: 3 (lower is better)
Translates to: RIVKGKSLFPVF*IFQCGLSHIPP
Trigger: AGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCTTCACAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR-3UTR CAA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAAAGATTCCCAAAATGTaGAGGCTATGGAGAAAAACG +
Preference number: 3 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPKIPKM*RLWRKT
Trigger: CGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTT...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGGTCCTTGGGGTCCATaGCGCGCGGGGTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGEGPWGP*RAGWAV
Trigger: CACCGCCCACCCCGCGCGCCATGGACCCCAAGGACC...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGGTCCTTGGGGTCCATaGCGCGCGGGGTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHGPWGP*RAGWAV
Trigger: CACCGCCCACCCCGCGCGCCATGGACCCCAAGGACC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCATCTTCTTGCGGTCCTTaGGGTCCATGGCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASSSCGP*GPWRAG
Trigger: CCCCGCGCGCCATGGACCCCAAGGACCGCAAGAAGA...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCTCCGGTCCCAGCTTTaGGGTCCCCAGCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHLRSQL*GPQPVP
Trigger: GGGGACGGGCTGGGGACCCCAAAGCTGGGACCGGAG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580825.5
CDS-3UTR TCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGAGGGGGAAGGGCGCTaGGGTTCCTCCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHEGEGR*GSSPGS
Trigger: TGAGCCTGGGGAGGAACCTCAGCGCCCTTCCCCCTC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGGACTGGCGCCCGGGTaGTCGGAGGGAGGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHGLAPG*SEGGFR
Trigger: CCTAAACCCTCCCTCCGAGCACCCGGGCGCCAGTCC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580825.5
CDS-3UTR CCA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCACGGATCATCTCCACCTaGCGGGGGTCGAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASRIIST*RGSSWL
Trigger: TAGCCAGCTCGACCCCCGCCAGGTGGAGATGATCCG...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR GCA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCAGGTGAGACTCAGCAATaGGCTGCACAGCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASGETQQ*AAQLVR
Trigger: CCTCACCAGCTGTGCAGCGCATTGCTGAGTCTCACC...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579000.5
CDS-3UTR CCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAGGTCCTTGGGGTCCATaGCGCGCGGGGTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTGPWGP*RAGWAV
Trigger: CACCGCCCACCCCGCGCGCCATGGACCCCAAGGACC...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CCA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCAGCGGGCACCGAGAACTaGATCTTCTTGCGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASAGTEN*IFLRSL
Trigger: CAAGGACCGCAAGAAGATCCAGTTCTCGGTGCCCGC...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCGGATCATCTCCACCTaGCGGGGGTCGAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHRIIST*RGSSWL
Trigger: TAGCCAGCTCGACCCCCGCCAGGTGGAGATGATCCG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCCTGAGGCTCTCTGGTaGGGGGAGGCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHPEALW*GEASSS
Trigger: AGAGGAGGAAGCCTCCCCCCACCAGAGAGCCTCAGG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
CDS-3UTR CCA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCAAATGACTGGCAGGGGTaGGCATCAGGCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASNDWQG*ASGSKC
Trigger: GCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATT...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAACCTGGGGGACCTCTCTaGGGGCCTTGGTTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGEPGGPL*GPWFGL
Trigger: AAGCCCAAACCAAGGCCCCCAGAGAGGTCCCCCAGG...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394265.5
ENST00000394267.2
CDS-3UTR TCA 90 bp ACCCTGGTAGAAGCCGGTGAGAGAAGTGGTGACTTGGAATCCTCCATAGGAAAGGAGGGGGAAGGGCGCTaGGGTTCCTCCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TLVEAGERSGDLESSIGKEGEGR*GSSPGS
Trigger: TGAGCCTGGGGAGGAACCTCAGCGCCCTTCCCCCTC...CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCGCTGAGCCAGGTCTGTaGCTCGCTCCCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSAEPGL*LAPSRS
Trigger: GGAGCGCGAGGGAGCGAGGCACAGACCTGGCTCAGC...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254079.9
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCAGGCGTTGGTCTCCTaGGCCGGATCATCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHQALVS*AGSSPP
Trigger: AGGTGGAGATGATCCGGCGCAGGAGACCAACGCCTG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCAGCATGGCAGGCGTTaGTCTCCTGCGCCGGATCAT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHQHGRR*SPAPDH
Trigger: ATGATCCGGCGCAGGAGACCAACGCCTGCCATGCTG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHRAGTA*QALVSC
Trigger: GCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCT...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCTGGGAGATGCAGGCTaGGTGCCTATGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHLGDAG*VPMCQA
Trigger: AGCCTGGCACATAGGCACCCAGCCTGCATCTCCCAG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCAAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASSAQVL*VSAKGG
Trigger: CCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACTGGGTCTCTTCGACTTaGGATGGTGCCCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHWVSST*DGAPLL
Trigger: CAGGAGAGGGGCACCATCTCAAGTCGAAGAGACCCA...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
CDS-3UTR TCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATGAGGGGGAAGGGCGCTaGGGTTCCTCCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHEGEGR*GSSPGS
Trigger: TGAGCCTGGGGAGGAACCTCAGCGCCCTTCCCCCTC...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACTCCTCTGGTGAGGAGTaGTCTGAGAGCCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHSSGEE*SESRNS
Trigger: GCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGGA...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGAGATGCAGGCTGGGTaGCTATGTGCCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHEMQAG*LCARLR
Trigger: TCTGAGCCTGGCACATAGGCACCCAGCCTGCATCTC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCTTCCTCCTGGGAGATaGAGGCTGGGTGCCTATGTG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHLPPGR*RLGAYV
Trigger: CACATAGGCACCCAGCCTGCATCTCCCAGGAGGAAG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACACAGCTGGTGAGGAGTaGTCTGAGAGCCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHTAGEE*SESRNS
Trigger: GCTGTTCCGGCTCTCAGAGCACTCCTCACCAGCTGT...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGCGGGCACCGAGAACTaGATCTTCTTGCGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHAGTEN*IFLRSL
Trigger: CAAGGACCGCAAGAAGATCCAGTTCTCGGTGCCCGC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS-3UTR TCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHLIDCR*DSAMRC
Trigger: GCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR TCA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCATGGGGAGTAGAATTGTaGAGGGCAAATCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASWGVEL*RANPCS
Trigger: GGAACAGGGATTTGCCCTTCACAATTCTACTCCCCA...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAATTTTCAGAAGGAGACTaGGCCAGCGCACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGEFSEGD*ASALQA
Trigger: TGCCTGCAGTGCGCTGGCTCAGTCTCCTTCTGAAAA...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394267.2
CDS-3UTR TCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCGCCGGATCTCCAGCTaGGGCTCAGGGACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHRRISS*GSGTQR
Trigger: CCTTTGGGTCCCTGAGCCTCAGCTGGAGATCCGGCG...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394265.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACTTCGACTTGAGATGGTaGCCCTCTCCTGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHFDLRW*PSPEAL
Trigger: GAGAGCCTCAGGAGAGGGGCACCATCTCAAGTCGAA...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGGTGAGACTCAGCAATaGGCTGCACAGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHGETQQ*AAQLSA
Trigger: CGCTGAAAGCTGTGCAGCGCATTGCTGAGTCTCACC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
CDS-3UTR GCA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAACAGATCTTAGGGTCCTaGCCTGTGGGTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGEQILGS*PVGLLC
Trigger: ACACAGGAGACCCACAGGGCAGGACCCTAAGATCTG...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCTCTTCGACTTGAGATaGTGCCCCTCTCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHLFDLR*CPSPEA
Trigger: AGCCTCAGGAGAGGGGCACCATCTCAAGTCGAAGAG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
CDS-3UTR CCA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGCTGGGTCTTCCACTTaGTCCTCAGAGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGEAGSST*SSEPPS
Trigger: AGATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGC...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGCTGGGTCTTCCACTTaGTCCTCAGAGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHAGSST*SSEPPS
Trigger: AGATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCCTGGGAGATGCAGGCTaGGTGCCTATGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPLGDAG*VPMCQA
Trigger: AGCCTGGCACATAGGCACCCAGCCTGCATCTCCCAG...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCCTCTCTGGGGGCCTTaGTTTGGGCTTCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHPLWGP*FGLLFQ
Trigger: CTGGAAAAGAAGCCCAAACCAAGGCCCCCAGAGAGG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CCA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCCCTGGGGGACCTCTCTaGGGGCCTTGGTTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSPGGPL*GPWFGL
Trigger: AAGCCCAAACCAAGGCCCCCAGAGAGGTCCCCCAGG...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394265.5
ENST00000394267.2
CDS-3UTR TCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCTGGGTCTCTTCGACTTaGGATGGTGCCCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLWVSST*DGAPLL
Trigger: CAGGAGAGGGGCACCATCTCAAGTCGAAGAGACCCA...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR TCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCTCATCCTCCTCCTCTaGGGCCTGGTTCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHLILLL*GLVLIQ
Trigger: TTGAATGAGAACCAGGCCTCAGAGGAGGAGGATGAG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR TCA 90 bp GAAGATTCCCAAAATGTTGAGGCTATGGAGAAAAACGCCTTAGTCCTGGACCCTGAGGGGGAAGGGCGCTaGGGTTCCTCCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EDSQNVEAMEKNALVLDPEGEGR*GSSPGS
Trigger: TGAGCCTGGGGAGGAACCTCAGCGCCCTTCCCCCTC...AGGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGGGGAAACTGGCCAATaGGCATGGAGAATCGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHGETGQ*AWRIVF
Trigger: GAACACGATTCTCCATGCTCATTGGCCAGTTTCCCC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580825.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACAGAACTGGATCTTCTTaGGGTCCTTGGGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHRTGSS*GPWGPW
Trigger: CCATGGACCCCAAGGACCGCAAGAAGATCCAGTTCT...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS-3UTR GCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCTCCTCTGGTGAGGAGTaGTCTGAGAGCCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLSSGEE*SESRNS
Trigger: GCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGGA...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGACTCAGCAATGCGCTaGACAGCTTTCAGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHDSAMR*TAFSEG
Trigger: ACCTTCGCTGAAAGCTGTGCAGCGCATTGCTGAGTC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
CDS-3UTR GCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCTTCCTCCTGGGAGATaGAGGCTGGGTGCCTATGTG +
Preference number: 4 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLLPPGR*RLGAYV
Trigger: CACATAGGCACCCAGCCTGCATCTCCCAGGAGGAAG...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTTCTTCTTGCGGTCCTTaGGGTCCATGGCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLSSCGP*GPWRAG
Trigger: CCCCGCGCGCCATGGACCCCAAGGACCGCAAGAAGA...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACACGGATCATCTCCACCTaGCGGGGGTCGAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTRIIST*RGSSWL
Trigger: TAGCCAGCTCGACCCCCGCCAGGTGGAGATGATCCG...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCACCTGAGGCTCTCTGGTaGGGGGAGGCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPPEALW*GEASSS
Trigger: AGAGGAGGAAGCCTCCCCCCACCAGAGAGCCTCAGG...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CCA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTCCTGAGGCTCTCTGGTaGGGGGAGGCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPPEALW*GEASSS
Trigger: AGAGGAGGAAGCCTCCCCCCACCAGAGAGCCTCAGG...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CCA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGEDRVGF*GTAMSP
Trigger: AGGGGACATCGCTGTTCCCCAGAAACCCACTCTATC...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCAATGACTGGCAGGGGTaGGCATCAGGCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPNDWQG*ASGSKC
Trigger: GCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATT...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCAATGACTGGCAGGGGTaGGCATCAGGCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLNDWQG*ASGSKC
Trigger: GCACTTGCTGCCTGATGCCCACCCCTGCCAGTCATT...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCGTGTCTCTCCCCTCCTaGGTGTCTCTGCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSVSLPS*VSLRVS
Trigger: GGAGACACGCAGAGACACTCAGGAGGGGAGAGACAC...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254079.9
CDS-3UTR TCA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAATGGGGAGTAGAATTGTaGAGGGCAAATCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGEWGVEL*RANPCS
Trigger: GGAACAGGGATTTGCCCTTCACAATTCTACTCCCCA...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCAGGCGTTGGTCTCCTaGGCCGGATCATCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHQALVS*AGSSPP
Trigger: AGGTGGAGATGATCCGGCGCAGGAGACCAACGCCTG...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR GCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACTTTTGCCCAGCAGACTaGCTGATGACCTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHFCPAD*LMTFRT
Trigger: AGTCCTGAAGGTCATCAGGCAGTCTGCTGGGCAAAA...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR GCA 90 bp ACCCTGGTAGAAGCCGGTGAGAGAAGTGGTGACTTGGAATCCTCCATAGGAAAGCTTCCTCCTGGGAGATaGAGGCTGGGTGCCTATGTG +
Preference number: 4 (lower is better)
Translates to: TLVEAGERSGDLESSIGKLPPGR*RLGAYV
Trigger: CACATAGGCACCCAGCCTGCATCTCCCAGGAGGAAG...CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCGCATCAGGCAGCAAGTaGCCAGGTTCTCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLASGSK*PGSLGI
Trigger: GATACCCAGAGAACCTGGGCACTTGCTGCCTGATGC...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCCAGATCTTAGGGTCCTaGCCTGTGGGTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPQILGS*PVGLLC
Trigger: ACACAGGAGACCCACAGGGCAGGACCCTAAGATCTG...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCAGGCGTTGGTCTCCTaGGCCGGATCTCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSQALVS*AGSPAE
Trigger: CTCAGCTGGAGATCCGGCGCAGGAGACCAACGCCTG...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394265.5
CDS-3UTR CCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHRAGTA*QALVSC
Trigger: GCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCT...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTRAGTA*QALVSC
Trigger: GCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCT...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHRAGTA*QALVSC
Trigger: GCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCT...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCCTGAGGCTCTCTGGTaGGGGGAGGCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSPEALW*GEASSS
Trigger: AGAGGAGGAAGCCTCCCCCCACCAGAGAGCCTCAGG...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CCA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCCTCTTCGACTTGAGATaGTGCCCCTCTCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPLFDLR*CPSPEA
Trigger: AGCCTCAGGAGAGGGGCACCATCTCAAGTCGAAGAG...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCTCATCTTCCTCTCTTaGATAACCCAGCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHLIFLS*ITQLPK
Trigger: CTTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACTTCAGGACTTCAGCCTaGCTGTCCTCTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHFRTSA*LSSSSS
Trigger: GGAAGAAGAAGAGGACAGCCAGGCTGAAGTCCTGAA...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CCA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCGCTGGGTCTTCCACTTaGTCCTCAGAGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPAGSST*SSEPPS
Trigger: AGATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGC...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCACTGGGAGATGCAGGCTaGGTGCCTATGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPLGDAG*VPMCQA
Trigger: AGCCTGGCACATAGGCACCCAGCCTGCATCTCCCAG...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACACTAGGCGGCATTCCTaGCATCAAAGCACAAAACGC +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHTRRHS*HQSTKR
Trigger: GCGTTTTGTGCTTTGATGCCAGGAATGCCGCCTAGT...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCACAGCATGGCAGGCGTTaGTCTCCTGCGCCGGATCTA +
Preference number: 4 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPQHGRR*SPAPDL
Trigger: TAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTG...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394267.2
CDS-3UTR CCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCAGCATGGCAGGCGTTaGTCTCCTGCGCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSQHGRR*SPAPDL
Trigger: GAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTG...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394265.5
CDS-3UTR TCA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCTGGGTCTCTTCGACTTaGGATGGTGCCCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSWVSST*DGAPLL
Trigger: CAGGAGAGGGGCACCATCTCAAGTCGAAGAGACCCA...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR TCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATTGGGTCTCTTCGACTTaGGATGGTGCCCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHWVSST*DGAPLL
Trigger: CAGGAGAGGGGCACCATCTCAAGTCGAAGAGACCCA...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR TCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCTCATCCTCCTCCTCTaGGGCCTGGTTCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLLILLL*GLVLIQ
Trigger: TTGAATGAGAACCAGGCCTCAGAGGAGGAGGATGAG...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCTCTGGTGAGGAGTaGTCTGAGAGCCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTSSGEE*SESRNS
Trigger: GCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGGA...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCGAGATGCAGGCTGGGTaGCTATGTGCCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSEMQAG*LCARLR
Trigger: TCTGAGCCTGGCACATAGGCACCCAGCCTGCATCTC...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAGAGATGCAGGCTGGGTaGCTATGTGCCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTEMQAG*LCARLR
Trigger: TCTGAGCCTGGCACATAGGCACCCAGCCTGCATCTC...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACGAGATGCAGGCTGGGTaGCTATGTGCCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHEMQAG*LCARLR
Trigger: TCTGAGCCTGGCACATAGGCACCCAGCCTGCATCTC...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCACTTCCTCCTGGGAGATaGAGGCTGGGTGCCTATGTG +
Preference number: 4 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPLPPGR*RLGAYV
Trigger: CACATAGGCACCCAGCCTGCATCTCCCAGGAGGAAG...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCCTTCCTCCTGGGAGATaGAGGCTGGGTGCCTATGTG +
Preference number: 4 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSLPPGR*RLGAYV
Trigger: CACATAGGCACCCAGCCTGCATCTCCCAGGAGGAAG...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCCAGATCTTAGGGTCCTaGCCTGTGGGTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSQILGS*PVGLLC
Trigger: ACACAGGAGACCCACAGGGCAGGACCCTAAGATCTG...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACACAGGCGTTGGTCTCCTaGGCCGGATCTAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTQALVS*AGSKIS
Trigger: GCTGATCTTAGATCCGGCGCAGGAGACCAACGCCTG...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394267.2
CDS-3UTR GCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACGACTCAGCAATGCGCTaGACAGCTGGTGAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHDSAMR*TAGEEC
Trigger: GCACTCCTCACCAGCTGTGCAGCGCATTGCTGAGTC...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579000.5
CDS-3UTR CCA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFRAGTA*QALVSC
Trigger: GCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCT...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCTGGGAGATGCAGGCTaGGTGCCTATGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFLGDAG*VPMCQA
Trigger: AGCCTGGCACATAGGCACCCAGCCTGCATCTCCCAG...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCTGGGAGATGCAGGCTaGGTGCCTATGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSLGDAG*VPMCQA
Trigger: AGCCTGGCACATAGGCACCCAGCCTGCATCTCCCAG...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCAGGGTGAGGATAGAGTaGGTTTCTGGGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLRVRIE*VSGEQR
Trigger: TCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCT...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGGGTTTAGGGGAAACTaGCCAATGAGCATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHGFRGN*PMSMEN
Trigger: ATTCTCCATGCTCATTGGCCAGTTTCCCCTAAACCC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580825.5
CDS-3UTR TCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHLIDCR*DSAMRC
Trigger: GCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAG...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHLIDCR*DSAMRC
Trigger: GCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAG...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCCTCATCCTCCTCCTCTaGGGCCTGGTTCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSLILLL*GLVLIQ
Trigger: TTGAATGAGAACCAGGCCTCAGAGGAGGAGGATGAG...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCCTCCTGAGTGTCTCTaGGTGTCTCCTCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFPPECL*VSPLSA
Trigger: GGCAGAGAGAGGAGACACGCAGAGACACTCAGGAGG...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254079.9
CDS-3UTR GCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATTCGACTTGAGATGGTaGCCCTCTCCTGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTFDLRW*PSPEAL
Trigger: GAGAGCCTCAGGAGAGGGGCACCATCTCAAGTCGAA...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTTTCGACTTGAGATGGTaGCCCTCTCCTGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPFDLRW*PSPEAL
Trigger: GAGAGCCTCAGGAGAGGGGCACCATCTCAAGTCGAA...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACTTCGACTTGAGATGGTaGCCCTCTCCTGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHFDLRW*PSPEAL
Trigger: GAGAGCCTCAGGAGAGGGGCACCATCTCAAGTCGAA...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCGACTCAGCAATGCGCTaGACAGCTTTCAGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSDSAMR*TAFSEG
Trigger: ACCTTCGCTGAAAGCTGTGCAGCGCATTGCTGAGTC...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATGGTGAGACTCAGCAATaGGCTGCACAGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHGETQQ*AAQLSA
Trigger: CGCTGAAAGCTGTGCAGCGCATTGCTGAGTCTCACC...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCTTTTGCCCAGCAGACTaGCTGATGACCTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPFCPAD*LMTFRT
Trigger: AGTCCTGAAGGTCATCAGGCAGTCTGCTGGGCAAAA...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCGCATCAGGCAGCAAGTaGCCAGGTTCTCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSASGSK*PGSLGI
Trigger: GATACCCAGAGAACCTGGGCACTTGCTGCCTGATGC...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAGCATCAGGCAGCAAGTaGCCAGGTTCTCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTASGSK*PGSLGI
Trigger: GATACCCAGAGAACCTGGGCACTTGCTGCCTGATGC...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTGCGGGCACCGAGAACTaGATCTTCTTGCGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLAGTEN*IFLRSL
Trigger: CAAGGACCGCAAGAAGATCCAGTTCTCGGTGCCCGC...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCTTCGACTTGAGATaGTGCCCCTCTCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHLFDLR*CPSPEA
Trigger: AGCCTCAGGAGAGGGGCACCATCTCAAGTCGAAGAG...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGCTGGGTCTTCCACTTaGTCCTCAGAGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPAGSST*SSEPPS
Trigger: AGATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGC...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTGCTGGGTCTTCCACTTaGTCCTCAGAGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPAGSST*SSEPPS
Trigger: AGATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGC...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSDRVGF*GTAMSP
Trigger: AGGGGACATCGCTGTTCCCCAGAAACCCACTCTATC...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHSAQVL*VSAKGG
Trigger: CCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTCATCCCACCTCCCGCTaGGTGAATGGAGGAATGACT +
Preference number: 4 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPHPTSR*VNGGMT
Trigger: AGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATG...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACCATCCCACCTCCCGCTaGGTGAATGGAGGAATGACT +
Preference number: 4 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHHPTSR*VNGGMT
Trigger: AGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATG...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACACATCCCACCTCCCGCTaGGTGAATGGAGGAATGACT +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTHPTSR*VNGGMT
Trigger: AGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATG...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTCTCTGGGGGCCTTaGTTTGGGCTTCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSPLWGP*FGLLFQ
Trigger: CTGGAAAAGAAGCCCAAACCAAGGCCCCCAGAGAGG...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394265.5
ENST00000394267.2
CDS-3UTR TCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSLIDCR*DSAMRC
Trigger: GCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAG...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCCTCATCCTCCTCCTCTaGGGCCTGGTTCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSLILLL*GLVLIQ
Trigger: TTGAATGAGAACCAGGCCTCAGAGGAGGAGGATGAG...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATAGAACTGGATCTTCTTaGGGTCCTTGGGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHRTGSS*GPWGPW
Trigger: CCATGGACCCCAAGGACCGCAAGAAGATCCAGTTCT...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR GCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAAGAACTGGATCTTCTTaGGGTCCTTGGGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTRTGSS*GPWGPW
Trigger: CCATGGACCCCAAGGACCGCAAGAAGATCCAGTTCT...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR GCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATGACTCAGCAATGCGCTaGACAGCTTTCAGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHDSAMR*TAFSEG
Trigger: ACCTTCGCTGAAAGCTGTGCAGCGCATTGCTGAGTC...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTGACTCAGCAATGCGCTaGACAGCTTTCAGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPDSAMR*TAFSEG
Trigger: ACCTTCGCTGAAAGCTGTGCAGCGCATTGCTGAGTC...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTGGTGAGACTCAGCAATaGGCTGCACAGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLGETQQ*AAQLSA
Trigger: CGCTGAAAGCTGTGCAGCGCATTGCTGAGTCTCACC...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCTTTTGCCCAGCAGACTaGCTGATGACCTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSFCPAD*LMTFRT
Trigger: AGTCCTGAAGGTCATCAGGCAGTCTGCTGGGCAAAA...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp GAAGATTCCCAAAATGTTGAGGCTATGGAGAAAAACGCCTTAGTCCTGGACCCTGAGATGCAGGCTGGGTaGCTATGTGCCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EDSQNVEAMEKNALVLDPEMQAG*LCARLR
Trigger: TCTGAGCCTGGCACATAGGCACCCAGCCTGCATCTC...AGGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp ACCCTGGTAGAAGCCGGTGAGAGAAGTGGTGACTTGGAATCCTCCATAGGAAAGCTCATCTTCCTCTCTTaGATAACCCAGCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: TLVEAGERSGDLESSIGKLIFLS*ITQLPK
Trigger: CTTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAG...CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTGATAGAGTGGGTTTCTaGGGAACAGCGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPDRVGF*GTAMSP
Trigger: AGGGGACATCGCTGTTCCCCAGAAACCCACTCTATC...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAAGGGTGAGGATAGAGTaGGTTTCTGGGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTRVRIE*VSGEQR
Trigger: TCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCT...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCAGGGTGAGGATAGAGTaGGTTTCTGGGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: AFLASKHKTQQRGLCQSIRVRIE*VSGEQR
Trigger: TCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCT...GATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATAGGGTGAGGATAGAGTaGGTTTCTGGGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHRVRIE*VSGEQR
Trigger: TCGCTGTTCCCCAGAAACCCACTCTATCCTCACCCT...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCGGTATCAGCCAAAGGTaGGCAAACAAGCAAACACAG +
Preference number: 4 (lower is better)
Translates to: PCSRFSGFSNVGCLTSHLGISQR*ANKQTQ
Trigger: CTGTGTTTGCTTGTTTGCCCACCTTTGGCTGATACC...GAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFSAQVL*VSAKGG
Trigger: CCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTAGTGCCCAGGTTCTCTaGGTATCAGCCAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSSAQVL*VSAKGG
Trigger: CCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCCTGGATTTTCCAATGTaGGCTGTCTCACATCCCACC +
Preference number: 4 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSLDFPM*AVSHPT
Trigger: GGTGGGATGTGAGACAGCCCACATTGGAAAATCCAG...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp GAAGATTCCCAAAATGTTGAGGCTATGGAGAAAAACGCCTTAGTCCTGGACCCTCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: EDSQNVEAMEKNALVLDPLIDCR*DSAMRC
Trigger: GCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAG...AGGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTCTCATCCTCCTCCTCTaGGGCCTGGTTCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLLILLL*GLVLIQ
Trigger: TTGAATGAGAACCAGGCCTCAGAGGAGGAGGATGAG...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATGGGGAGTAGAATTGTaGAGGGCAAATCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTWGVEL*RANPCS
Trigger: GGAACAGGGATTTGCCCTTCACAATTCTACTCCCCA...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTTGGGGAGTAGAATTGTaGAGGGCAAATCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPWGVEL*RANPCS
Trigger: GGAACAGGGATTTGCCCTTCACAATTCTACTCCCCA...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCAGGAGGAGCAAGGGTaGTTAAGGGAAGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHQEEQG*LREDSQ
Trigger: TTGGGAATCTTCCCTTAATCACCCTTGCTCCTCCTG...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCAGGAGGAGCAAGGGTaGTTAAGGGAAGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSQEEQG*LREDSQ
Trigger: TTGGGAATCTTCCCTTAATCACCCTTGCTCCTCCTG...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACACAGGAGGAGCAAGGGTaGTTAAGGGAAGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTQEEQG*LREDSQ
Trigger: TTGGGAATCTTCCCTTAATCACCCTTGCTCCTCCTG...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp GAAGATTCCCAAAATGTTGAGGCTATGGAGAAAAACGCCTTAGTCCTGGACCCTGGTGAGACTCAGCAATaGGCTGCACAGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: EDSQNVEAMEKNALVLDPGETQQ*AAQLSA
Trigger: CGCTGAAAGCTGTGCAGCGCATTGCTGAGTCTCACC...AGGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR GCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATTTTTGCCCAGCAGACTaGCTGATGACCTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHFCPAD*LMTFRT
Trigger: AGTCCTGAAGGTCATCAGGCAGTCTGCTGGGCAAAA...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR GCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCATTTTGCCCAGCAGACTaGCTGATGACCTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPFCPAD*LMTFRT
Trigger: AGTCCTGAAGGTCATCAGGCAGTCTGCTGGGCAAAA...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCATCTTCCTCTCTTaGATAACCCAGCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHLIFLS*ITQLPK
Trigger: CTTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAG...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATTCAGGACTTCAGCCTaGCTGTCCTCTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTFRTSA*LSSSSS
Trigger: GGAAGAAGAAGAGGACAGCCAGGCTGAAGTCCTGAA...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCACTGGATTTTCCAATGTaGGCTGTCTCACATCCCACC +
Preference number: 4 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPLDFPM*AVSHPT
Trigger: GGTGGGATGTGAGACAGCCCACATTGGAAAATCCAG...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCCTGGATTTTCCAATGTaGGCTGTCTCACATCCCACC +
Preference number: 4 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSLDFPM*AVSHPT
Trigger: GGTGGGATGTGAGACAGCCCACATTGGAAAATCCAG...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACACTAGGCGGCATTCCTaGCATCAAAGCACAAAACGC +
Preference number: 4 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHTRRHS*HQSTKR
Trigger: GCGTTTTGTGCTTTGATGCCAGGAATGCCGCCTAGT...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATACTAGGCGGCATTCCTaGCATCAAAGCACAAAACGC +
Preference number: 4 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHTRRHS*HQSTKR
Trigger: GCGTTTTGTGCTTTGATGCCAGGAATGCCGCCTAGT...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
3UTR CAA 72 bp TGGACCCTGGTAGAAGCCGGTGAGAGAAGTGGTGACTaGGAATCCTCCATAGGAAAGTGGGTAGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: WTLVEAGERSGD*ESSIGKWVEKD
Trigger: ATCCTTTTCTACCCACTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR TCA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGAGGAGCAAGGGTaGTTAAGGGAAGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFQEEQG*LREDSQ
Trigger: TTGGGAATCTTCCCTTAATCACCCTTGCTCCTCCTG...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTCTCATCTTCCTCTCTTaGATAACCCAGCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSLIFLS*ITQLPK
Trigger: CTTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAG...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTTCAGGACTTCAGCCTaGCTGTCCTCTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSFRTSA*LSSSSS
Trigger: GGAAGAAGAAGAGGACAGCCAGGCTGAAGTCCTGAA...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTTTCAGGACTTCAGCCTaGCTGTCCTCTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLFRTSA*LSSSSS
Trigger: GGAAGAAGAAGAGGACAGCCAGGCTGAAGTCCTGAA...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGTATCAGCCAAAGGTaGGCAAACAAGCAAACACAG +
Preference number: 4 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPGISQR*ANKQTQ
Trigger: CTGTGTTTGCTTGTTTGCCCACCTTTGGCTGATACC...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTGGTATCAGCCAAAGGTaGGCAAACAAGCAAACACAG +
Preference number: 4 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPGISQR*ANKQTQ
Trigger: CTGTGTTTGCTTGTTTGCCCACCTTTGGCTGATACC...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCTGGATTTTCCAATGTaGGCTGTCTCACATCCCACC +
Preference number: 4 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFLDFPM*AVSHPT
Trigger: GGTGGGATGTGAGACAGCCCACATTGGAAAATCCAG...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTACTAGGCGGCATTCCTaGCATCAAAGCACAAAACGC +
Preference number: 4 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLTRRHS*HQSTKR
Trigger: GCGTTTTGTGCTTTGATGCCAGGAATGCCGCCTAGT...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CCA 90 bp GAAGATTCCCAAAATGTTGAGGCTATGGAGAAAAACGCCTTAGTCCTGGACCCTTTCAGGACTTCAGCCTaGCTGTCCTCTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EDSQNVEAMEKNALVLDPFRTSA*LSSSSS
Trigger: GGAAGAAGAAGAGGACAGCCAGGCTGAAGTCCTGAA...AGGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS CCA 90 bp CTCGCTGAGCCAGGTCTGTGCCTCGCTCCCTCGCGCTCCCCGGCCTaGGTGTCTCTGCGTCTCGGTGTCTCTCCCCTCCTGAGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LAEPGLCLAPSRSPA*VSLRLGVSPLLSVS
Trigger: AGAGACACTCAGGAGGGGAGAGACACCGAGACGCAGAGACACCCAGGCCGGGGAGCGCGAGGGAGCGAGGCACAGACCTGGCTCAGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000582680.5
CDS CCA 90 bp GTTGGTCTCCTGCGCCGGATCATCTCCACCTGGCGGGGGTCGAGCTaGCTAGGGGGCGCGGGCACCGAGAACTGGATCTTCTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: VGLLRRIISTWRGSS*LGGAGTENWIFLRS
Trigger: GGACCGCAAGAAGATCCAGTTCTCGGTGCCCGCGCCCCCTAGCCAGCTCGACCCCCGCCAGGTGGAGATGATCCGGCGCAGGAGACCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS CCA 90 bp TGCGCTGCACAGCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCATCTCCACCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: CAAQLVRSALRAGTA*QALVSCAGSSPPGG
Trigger: CCCGCCAGGTGGAGATGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGCTGTGCAGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579000.5
CDS CCA 90 bp AGGCTTCCTCCTCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCTGGCGGGGGTCGAGCT +
Preference number: 5 (lower is better)
Translates to: RLPPLVRSALRAGTA*QALVSCAGSGGGRA
Trigger: AGCTCGACCCCCGCCAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGGAGGAAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582680.5
CDS TCA 90 bp AGAAGGCCCAGAGGGGTAGGGCCAGGCTGGAAACCTCCGGCACAGTaGGCAGGGTGCTATGCTCCTGCCAACTCGGGGACAGGCACAGAG +
Preference number: 5 (lower is better)
Translates to: RRPRGVGPGWKPPAQ*AGCYAPANSGTGTE
Trigger: CTCTGTGCCTGTCCCCGAGTTGGCAGGAGCATAGCACCCTGCTCACTGTGCCGGAGGTTTCCAGCCTGGCCCTACCCCTCTGGGCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CCA 90 bp AGGCTTCCTCCTCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCATCTCCACCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: RLPPLVRSALRAGTA*QALVSCAGSSPPGG
Trigger: CCCGCCAGGTGGAGATGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGGAGGAAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000580825.5
CDS CCA 90 bp GATGCTAGCCCCCAGGCAGCTCCCCCACACCATAGGGCACTAGGCTaGGCAAGACCAGGCGGGCACAGCAGCAGCTTAACATTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: DASPQAAPPHHRALG*ARPGGHSSSLTFPG
Trigger: GCCAGGGAATGTTAAGCTGCTGCTGTGCCCGCCTGGTCTTGCCCAGCCTAGTGCCCTATGGTGTGGGGGAGCTGCCTGGGGGCTAGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCCTCCGGTCCCAGCTTaGGGGTCCCCAGCCCGTCCC +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHPPVPA*GSPARP
Trigger: GGGACGGGCTGGGGACCCCAAAGCTGGGACCGGAGG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580825.5
CDS GCA 90 bp GCCAGGCTGGAAACCTCCGGCACAGTGAGCAGGGTGCTATGCTCCTaGCAACTCGGGGACAGGCACAGAGGGTGCTTTGTATGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: ARLETSGTVSRVLCS*QLGDRHRGCFVCAR
Trigger: GCGGGCACATACAAAGCACCCTCTGTGCCTGTCCCCGAGTTGGCAGGAGCATAGCACCCTGCTCACTGTGCCGGAGGTTTCCAGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CCA 90 bp AGGCTTCCTCCTCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCTCCAGCTGAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RLPPLVRSALRAGTA*QALVSCAGSPAEAQ
Trigger: CTGAGCCTCAGCTGGAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGGAGGAAGCCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394265.5
CDS GCA 90 bp AGAGTTCACTTCGTGAGCCACAGTGACAACAGAAGGTGTGTGCGGTaGTTGCGCTGGTGCCCCGTGAGCCTCCCTCGCTTCCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: RVHFVSHSDNRRCVR*LRWCPVSLPRFPHL
Trigger: GAGGTGGGGGAAGCGAGGGAGGCTCACGGGGCACCAGCGCAAGCACCGCACACACCTTCTGTTGTCACTGTGGCTCACGAAGTGAACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS TCA 90 bp CAGGCAGCTTCCTTCTCCCCCAGCGGGGGAGGAGAGTTCACTTCGTaGGCCACAGTGACAACAGAAGGTGTGTGCGGTGCTTGCGCTGGT +
Preference number: 5 (lower is better)
Translates to: QAASFSPSGGGEFTS*ATVTTEGVCGACAG
Trigger: ACCAGCGCAAGCACCGCACACACCTTCTGTTGTCACTGTGGCTCACGAAGTGAACTCTCCTCCCCCGCTGGGGGAGAAGGAAGCTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 90 bp GGTAGGGCCAGGCTGGAAACCTCCGGCACAGTGAGCAGGGTGCTATaGTCCTGCCAACTCGGGGACAGGCACAGAGGGTGCTTTGTATGT +
Preference number: 5 (lower is better)
Translates to: GRARLETSGTVSRVL*SCQLGDRHRGCFVC
Trigger: ACATACAAAGCACCCTCTGTGCCTGTCCCCGAGTTGGCAGGAGCATAGCACCCTGCTCACTGTGCCGGAGGTTTCCAGCCTGGCCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACATCTTCTTGCGGTCCTaGGGGTCCATGGCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHIFLRS*GSMARG
Trigger: CCCGCGCGCCATGGACCCCAAGGACCGCAAGAAGAT...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS GCA 90 bp GGACAGAACAATTCCGAGGCTGAGGACATAATAGTCTGCAGCCAGTaGAGTCTGTGCCGGGGGATGCGGCATGCTCAGATGCGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: GQNNSEAEDIIVCSQ*SLCRGMRHAQMRPP
Trigger: TGGGGGCCGCATCTGAGCATGCCGCATCCCCCGGCACAGACTGCACTGGCTGCAGACTATTATGTCCTCAGCCTCGGAATTGTTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 90 bp CTGATCCTACCTCCCATGCGATGCATAGTCCCCACTCCCTGGCACTaGCCAGTCATAGATGCCAATCCACATACTCCTGCCCCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LILPPMRCIVPTPWH*PVIDANPHTPAPGS
Trigger: GGAGCCCGGGGCAGGAGTATGTGGATTGGCATCTATGACTGGGCAGTGCCAGGGAGTGGGGACTATGCATCGCATGGGAGGTAGGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CCA 90 bp AGGCTTCCTCCTCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCTAAGATCAGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: RLPPLVRSALRAGTA*QALVSCAGSKISSR
Trigger: CCTTGAGCTGATCTTAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGGAGGAAGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394267.2
ENST00000580772.1
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACACAGCATGGCAGGCGTaGGTCTCCTGCGCCGGATCA +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHTAWQA*VSCAGS
Trigger: TGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGT...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CAA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCAGACCCTGGCCACAGGTaGTCTTTTGCCCAGCAGACT +
Preference number: 5 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASDPGHR*SFAQQT
Trigger: AGTCTGCTGGGCAAAAGACAACCTGTGGCCAGGGTC...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS TCA 90 bp ACATACTCCTGCCCCGGGCTCCAAGGGACAGAACAATTCCGAGGCTaGGGACATAATAGTCTGCAGCCAGTGCAGTCTGTGCCGGGGGAT +
Preference number: 5 (lower is better)
Translates to: TYSCPGLQGTEQFRG*GHNSLQPVQSVPGD
Trigger: ATCCCCCGGCACAGACTGCACTGGCTGCAGACTATTATGTCCTCAGCCTCGGAATTGTTCTGTCCCTTGGAGCCCGGGGCAGGAGTATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 90 bp GGCTCCAAGGGACAGAACAATTCCGAGGCTGAGGACATAATAGTCTaGAGCCAGTGCAGTCTGTGCCGGGGGATGCGGCATGCTCAGATG +
Preference number: 5 (lower is better)
Translates to: GSKGQNNSEAEDIIV*SQCSLCRGMRHAQM
Trigger: CATCTGAGCATGCCGCATCCCCCGGCACAGACTGCACTGGCTGCAGACTATTATGTCCTCAGCCTCGGAATTGTTCTGTCCCTTGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 90 bp CATGCGATGCATAGTCCCCACTCCCTGGCACTGCCCAGTCATAGATaGCAATCCACATACTCCTGCCCCGGGCTCCAAGGGACAGAACAA +
Preference number: 5 (lower is better)
Translates to: HAMHSPHSLALPSHR*QSTYSCPGLQGTEQ
Trigger: TTGTTCTGTCCCTTGGAGCCCGGGGCAGGAGTATGTGGATTGGCATCTATGACTGGGCAGTGCCAGGGAGTGGGGACTATGCATCGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 90 bp CCTGCTGAGGGCTCACTGCTTACCCTGATCCTACCTCCCATGCGATaGATAGTCCCCACTCCCTGGCACTGCCCAGTCATAGATGCCAAT +
Preference number: 5 (lower is better)
Translates to: PAEGSLLTLILPPMR*IVPTPWHCPVIDAN
Trigger: ATTGGCATCTATGACTGGGCAGTGCCAGGGAGTGGGGACTATGCATCGCATGGGAGGTAGGATCAGGGTAAGCAGTGAGCCCTCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CCA 90 bp CTTACCCTGATCCTACCTCCCATGCGATGCATAGTCCCCACTCCCTaGCACTGCCCAGTCATAGATGCCAATCCACATACTCCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: LTLILPPMRCIVPTP*HCPVIDANPHTPAP
Trigger: CGGGGCAGGAGTATGTGGATTGGCATCTATGACTGGGCAGTGCCAGGGAGTGGGGACTATGCATCGCATGGGAGGTAGGATCAGGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS-3UTR CAA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCATCTTCTTGCGGTCCTaGGGGTCCATGGCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSIFLRS*GSMARG
Trigger: CCCGCGCGCCATGGACCCCAAGGACCGCAAGAAGAT...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CAA 90 bp ACATCCCACCTCCCGCTGGGTGAATGGAGGAATGACTGGCAGGGGTGGGCATCACCTCATCTTCCTCTCTaGGATAACCCAGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: TSHLPLGEWRNDWQGWASPHLPL*DNPAPE
Trigger: TTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAGG...TGATGCCCACCCCTGCCAGTCATTCCTCCATTCACCCAGCGGGAGGTGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGACCCTGGCCACAGGTaGTCTTTTGCCCAGCAGACT +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHDPGHR*SFAQQT
Trigger: AGTCTGCTGGGCAAAAGACAACCTGTGGCCAGGGTC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACTGCTGGGTCTTCCACTaGGTCCTCAGAGCCTCCATC +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHCWVFH*VLRASI
Trigger: GATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGCA...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS CCA 90 bp TGTCAGACCAGGGCAGAGGCAGCCAGGGGTAGATTTGATCATGTTTaGCTCTTAAGCTGTCCTAAGATGCTAGCCCCCAGGCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: CQTRAEAARGRFDHV*LLSCPKMLAPRQLP
Trigger: GGGGAGCTGCCTGGGGGCTAGCATCTTAGGACAGCTTAAGAGCCAAACATGATCAAATCTACCCCTGGCTGCCTCTGCCCTGGTCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS-3UTR CAA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAATCTTCTTGCGGTCCTaGGGGTCCATGGCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTIFLRS*GSMARG
Trigger: CCCGCGCGCCATGGACCCCAAGGACCGCAAGAAGAT...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGAGAACTGGATCTTCTaGCGGTCCTTGGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHENWIF*RSLGSM
Trigger: CATGGACCCCAAGGACCGCAAGAAGATCCAGTTCTC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACTTGGGTCTCTTCGACTaGAGATGGTGCCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHLGLFD*RWCPSP
Trigger: AGGAGAGGGGCACCATCTCAAGTCGAAGAGACCCAA...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACGCCACAGGTTGTCTTTaGCCCAGCAGACTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHATGCL*PSRLPD
Trigger: ATCAGGCAGTCTGCTGGGCAAAAGACAACCTGTGGC...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS CCA 90 bp TCTCCTGCGCCGGATCTAAGATCAGCTCAAGGGCTTCAAACAAGCTaGATCCAGCTTTTCAGAAGGAGACTGAGCCAGCGCACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SPAPDLRSAQGLQTS*IQLFRRRLSQRTAG
Trigger: GCCTGCAGTGCGCTGGCTCAGTCTCCTTCTGAAAAGCTGGATCCAGCTTGTTTGAAGCCCTTGAGCTGATCTTAGATCCGGCGCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394267.2
ENST00000580772.1
CDS-3UTR CAA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAACAGCATGGCAGGCGTaGGTCTCCTGCGCCGGATCA +
Preference number: 5 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTTAWQA*VSCAGS
Trigger: TGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGT...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CAA 90 bp ACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAACCTCATCTTCCTCTCTaGGATAACCCAGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: TSLSLLEVRSRSPSRRGEPHLPL*DNPAPE
Trigger: TTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAGG...TTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp CTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCAGGCGAGGGGAAGAGCACCCTCATCTTCCTCTCTaGGATAACCCAGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: LSLLEVRSRSPSRRGEEHPHLPL*DNPAPE
Trigger: TTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAGG...GTGCTCTTCCCCTCGCCTGCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
ENST00000580825.5
CDS-3UTR CAA 90 bp GCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCACAGCATGGCAGGCGTaGGTCTCCTGCGCCGGATCT +
Preference number: 5 (lower is better)
Translates to: AFLASKHKTQQRGLCQSITAWQA*VSCAGS
Trigger: AGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGT...GATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394265.5
ENST00000394267.2
CDS TCA 90 bp TCCTCTGAGGCCTGGTTCTCATTCAAATTGCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGCACAGCTGGCACAGAGGAGACCGAG +
Preference number: 5 (lower is better)
Translates to: SSEAWFSFKLLIDCR*DSAMRCTAGTEETE
Trigger: CTCGGTCTCCTCTGTGCCAGCTGTGCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAGCAATTTGAATGAGAACCAGGCCTCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS-3UTR CAA 90 bp AAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTAGCGACCCTGGCCACAGGTaGTCTTTTGCCCAGCAGACT +
Preference number: 5 (lower is better)
Translates to: KQTQTSLSLLEVRSRSPSDPGHR*SFAQQT
Trigger: AGTCTGCTGGGCAAAAGACAACCTGTGGCCAGGGTC...GCTAGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS TCA 90 bp TCCTCTGAGGCCTGGTTCTCATTCAAATTGCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGCACAGCTGGTGAGGAGTGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SSEAWFSFKLLIDCR*DSAMRCTAGEECSE
Trigger: CTCAGAGCACTCCTCACCAGCTGTGCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAGCAATTTGAATGAGAACCAGGCCTCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579000.5
CDS-3UTR CAA 90 bp ACCCTGGTAGAAGCCGGTGAGAGAAGTGGTGACTTGGAATCCTCCATAGGAAAGGAGAACTGGATCTTCTaGCGGTCCTTGGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: TLVEAGERSGDLESSIGKENWIF*RSLGSM
Trigger: CATGGACCCCAAGGACCGCAAGAAGATCCAGTTCTC...CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000579000.5
CDS-3UTR CAA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCGACCCTGGCCACAGGTaGTCTTTTGCCCAGCAGACT +
Preference number: 5 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSDPGHR*SFAQQT
Trigger: AGTCTGCTGGGCAAAAGACAACCTGTGGCCAGGGTC...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATGCTGGGTCTTCCACTaGGTCCTCAGAGCCTCCATC +
Preference number: 5 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTCWVFH*VLRASI
Trigger: GATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGCA...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp CATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGGCACTGCTGGGTCTTCCACTaGGTCCTCAGAGCCTCCATC +
Preference number: 5 (lower is better)
Translates to: HQSTKRNKEVSASPSSRHCWVFH*VLRASI
Trigger: GATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGCA...GTGCCTGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp GAAGATTCCCAAAATGTTGAGGCTATGGAGAAAAACGCCTTAGTCCTGGACCCTACAGCATGGCAGGCGTaGGTCTCCTGCGCCGGATCT +
Preference number: 5 (lower is better)
Translates to: EDSQNVEAMEKNALVLDPTAWQA*VSCAGS
Trigger: AGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGT...AGGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394265.5
ENST00000394267.2
CDS TCA 90 bp TCCTCTGAGGCCTGGTTCTCATTCAAATTGCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGCACAGCTTTCAGCGAAGGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: SSEAWFSFKLLIDCR*DSAMRCTAFSEGGV
Trigger: CACACCACCTTCGCTGAAAGCTGTGCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAGCAATTTGAATGAGAACCAGGCCTCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
ENST00000582680.5
ENST00000583446.5
CDS GCA 90 bp TTCTTTCAAGCCCACAACCCGATGTTAAGGCCCATAGCTGCCCATTaGAGCCTCGGGACTCCTGTGTTTTGCAAGGCCAGACTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: FFQAHNPMLRPIAAH*SLGTPVFCKARLRK
Trigger: TTTTCTCAGTCTGGCCTTGCAAAACACAGGAGTCCCGAGGCTGCAATGGGCAGCTATGGGCCTTAACATCGGGTTGTGGGCTTGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS GCA 90 bp ATCTCTTTTCTTTCAAGCCCACAACCCGATGTTAAGGCCCATAGCTaGCCATTGCAGCCTCGGGACTCCTGTGTTTTGCAAGGCCAGACT +
Preference number: 5 (lower is better)
Translates to: ISFLSSPQPDVKAHS*PLQPRDSCVLQGQT
Trigger: AGTCTGGCCTTGCAAAACACAGGAGTCCCGAGGCTGCAATGGGCAGCTATGGGCCTTAACATCGGGTTGTGGGCTTGAAAGAAAAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS-3UTR CAA 90 bp TCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCTTGGGTCTCTTCGACTaGAGATGGTGCCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: SWHQSTKRNKEVSASPSSLGLFD*RWCPSP
Trigger: AGGAGAGGGGCACCATCTCAAGTCGAAGAGACCCAA...GGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CAA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATTGGGTCTCTTCGACTaGAGATGGTGCCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTLGLFD*RWCPSP
Trigger: AGGAGAGGGGCACCATCTCAAGTCGAAGAGACCCAA...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CAA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCTTGGGTCTCTTCGACTaGAGATGGTGCCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSLGLFD*RWCPSP
Trigger: AGGAGAGGGGCACCATCTCAAGTCGAAGAGACCCAA...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CAA 90 bp ACCCTGGTAGAAGCCGGTGAGAGAAGTGGTGACTTGGAATCCTCCATAGGAAAGCCTCATCTTCCTCTCTaGGATAACCCAGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: TLVEAGERSGDLESSIGKPHLPL*DNPAPE
Trigger: TTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAGG...CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCAGCCACAGGTTGTCTTTaGCCCAGCAGACTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPATGCL*PSRLPD
Trigger: ATCAGGCAGTCTGCTGGGCAAAAGACAACCTGTGGC...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp AACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCCCTGCCACAGGTTGTCTTTaGCCCAGCAGACTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: NKQTQTSLSLLEVRSRSPATGCL*PSRLPD
Trigger: ATCAGGCAGTCTGCTGGGCAAAAGACAACCTGTGGC...AGGGCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp TTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCTGCTGGGTCTTCCACTaGGTCCTCAGAGCCTCCATC +
Preference number: 5 (lower is better)
Translates to: FLASKHKTQQRGLCQSIFCWVFH*VLRASI
Trigger: GATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGCA...GAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp CCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTTCCATCTGGGGGCCTTGGTTaGGGCTTCTTTTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: PGIKAQNATKRSLPVHLPSGGLG*GFFSSL
Trigger: GAGACTGGAAAAGAAGCCCAAACCAAGGCCCCCAGA...TGGAAGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CAA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCCTCATCTTCCTCTCTaGGATAACCCAGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHPHLPL*DNPAPE
Trigger: TTCGGGAGCTGGGTTATCCAAGAGAGGAAGATGAGG...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp CATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATCTGCCACAGGTTGTCTTTaGCCCAGCAGACTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: HSWHQSTKRNKEVSASPSATGCL*PSRLPD
Trigger: ATCAGGCAGTCTGCTGGGCAAAAGACAACCTGTGGC...AGATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp GAAGATTCCCAAAATGTTGAGGCTATGGAGAAAAACGCCTTAGTCCTGGACCCTTGCTGGGTCTTCCACTaGGTCCTCAGAGCCTCCATC +
Preference number: 5 (lower is better)
Translates to: EDSQNVEAMEKNALVLDPCWVFH*VLRASI
Trigger: GATGGAGGCTCTGAGGACCAAGTGGAAGACCCAGCA...AGGGTCCAGGACTAAGGCGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp CTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATCCCACCTCCCGAGAGAAGTGGTGACTaGGAATCCTCCATAGGAAAG +
Preference number: 5 (lower is better)
Translates to: LFPVFWIFQCGLSHIPPPERSGD*ESSIGK
Trigger: CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTC...GGGAGGTGGGATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTTCTGGGGGCCTTGGTTaGGGCTTCTTTTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLSGGLG*GFFSSL
Trigger: GAGACTGGAAAAGAAGCCCAAACCAAGGCCCCCAGA...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394265.5
ENST00000394267.2
CDS-3UTR CAA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCGAGAGAAGTGGTGACTaGGAATCCTCCATAGGAAAG +
Preference number: 5 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSERSGD*ESSIGK
Trigger: CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTC...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp GGAAAGTGGGTAGAAAAGGATCTAAGGGTACCTCAAGGTTCTCAGGACCTCCTTGAGAGAAGTGGTGACTaGGAATCCTCCATAGGAAAG +
Preference number: 5 (lower is better)
Translates to: GKWVEKDLRVPQGSQDLLERSGD*ESSIGK
Trigger: CTTTCCTATGGAGGATTCCAAGTCACCACTTCTCTC...AAGGAGGTCCTGAGAACCTTGAGGTACCCTTAGATCCTTTTCTACCCACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp GCAAACAAGCAAACACAGACCAGCCTTAGTCTTCTAGAAGTCAGAAGCCGCAGCAAGATTCCCAAAATGTaGAGGCTATGGAGAAAAACG +
Preference number: 5 (lower is better)
Translates to: ANKQTQTSLSLLEVRSRSKIPKM*RLWRKT
Trigger: CGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTT...GCTGCGGCTTCTGACTTCTAGAAGACTAAGGCTGGTCTGTGTTTGCTTGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp AGGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACAAAGATTCCCAAAATGTaGAGGCTATGGAGAAAAACG +
Preference number: 5 (lower is better)
Translates to: RANPCSRFSGFSNVGCLTKIPKM*RLWRKT
Trigger: CGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTT...TGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp GGGCAAATCCCTGTTCCCGGTTTTCTGGATTTTCCAATGTGGGCTGTCTCACATAAGATTCCCAAAATGTaGAGGCTATGGAGAAAAACG +
Preference number: 5 (lower is better)
Translates to: GQIPVPGFLDFPMWAVSHKIPKM*RLWRKT
Trigger: CGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTT...ATGTGAGACAGCCCACATTGGAAAATCCAGAAAACCGGGAACAGGGATTTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS-3UTR CAA 90 bp GGCATTCCTGGCATCAAAGCACAAAACGCAACAAAGAGGTCTCTGCCAGTCCATAAGATTCCCAAAATGTaGAGGCTATGGAGAAAAACG +
Preference number: 5 (lower is better)
Translates to: GIPGIKAQNATKRSLPVHKIPKM*RLWRKT
Trigger: CGTTTTTCTCCATAGCCTCAACATTTTGGGAATCTT...ATGGACTGGCAGAGACCTCTTTGTTGCGTTTTGTGCTTTGATGCCAGGAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000579000.5
CDS CCA 72 bp GCGCGGGCACCGAGAACTGGATCTTCTTGCGGTCCTTaGGGTCCATGGCGCGCGGGGTGGGCGGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: ARAPRTGSSCGP*GPWRAGWAVGL
Trigger: CAGCCCCACCGCCCACCCCGCGCGCCATGGACCCCAAGGACCGCAAGAAGATCCAGTTCTCGGTGCCCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
ENST00000582680.5
CDS CCA 72 bp GGGTCGAGCTGGCTAGGGGGCGCGGGCACCGAGAACTaGATCTTCTTGCGGTCCTTGGGGTCCATGGCGCGC +
Preference number: 6 (lower is better)
Translates to: GSSWLGGAGTEN*IFLRSLGSMAR
Trigger: GCGCGCCATGGACCCCAAGGACCGCAAGAAGATCCAGTTCTCGGTGCCCGCGCCCCCTAGCCAGCTCGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
ENST00000582680.5
CDS CCA 72 bp CTGCGCCGGATCATCTCCACCTGGCGGGGGTCGAGCTaGCTAGGGGGCGCGGGCACCGAGAACTGGATCTTC +
Preference number: 6 (lower is better)
Translates to: LRRIISTWRGSS*LGGAGTENWIF
Trigger: GAAGATCCAGTTCTCGGTGCCCGCGCCCCCTAGCCAGCTCGACCCCCGCCAGGTGGAGATGATCCGGCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS CCA 72 bp GTTGGTCTCCTGCGCCGGATCTGGCGGGGGTCGAGCTaGCTAGGGGGCGCGGGCACCGAGAACTGGATCTTC +
Preference number: 6 (lower is better)
Translates to: VGLLRRIWRGSS*LGGAGTENWIF
Trigger: GAAGATCCAGTTCTCGGTGCCCGCGCCCCCTAGCCAGCTCGACCCCCGCCAGATCCGGCGCAGGAGACCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582680.5
CDS CCA 72 bp CCTCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: PLVRSALRAGTA*QALVSCAGSGG
Trigger: CCCGCCAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582680.5
CDS CAA 72 bp AGGAGTGCTCTGAGAGCCGGAACAGCATGGCAGGCGTaGGTCTCCTGCGCCGGATCTGGCGGGGGTCGAGCT +
Preference number: 6 (lower is better)
Translates to: RSALRAGTAWQA*VSCAGSGGGRA
Trigger: AGCTCGACCCCCGCCAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582680.5
CDS GCA 72 bp TGGGAGGTGGTCCACCACAGGCTGGTGAAGAGGAGCTaGAGGTGGAGTCCCTTCCACGCGGATGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: WEVVHHRLVKRS*RWSPFHADACW
Trigger: CCAGCAGGCATCCGCGTGGAAGGGACTCCACCTGCAGCTCCTCTTCACCAGCCTGTGGTGGACCACCTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS CCA 72 bp CACAGTGACAACAGAAGGTGTGTGCGGTGCTTGCGCTaGTGCCCCGTGAGCCTCCCTCGCTTCCCCCACCTC +
Preference number: 6 (lower is better)
Translates to: HSDNRRCVRCLR*CPVSLPRFPHL
Trigger: GAGGTGGGGGAAGCGAGGGAGGCTCACGGGGCACCAGCGCAAGCACCGCACACACCTTCTGTTGTCACTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CAA 72 bp AGGAGTGCTCTGAGAGCCGGAACAGCATGGCAGGCGTaGGTCTCCTGCGCCGGATCATCTCCACCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: RSALRAGTAWQA*VSCAGSSPPGG
Trigger: CCCGCCAGGTGGAGATGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254079.9
ENST00000579000.5
ENST00000580825.5
CDS TCA 72 bp AGAGGGGTAGGGCCAGGCTGGAAACCTCCGGCACAGTaGGCAGGGTGCTATGCTCCTGCCAACTCGGGGACA +
Preference number: 6 (lower is better)
Translates to: RGVGPGWKPPAQ*AGCYAPANSGT
Trigger: TGTCCCCGAGTTGGCAGGAGCATAGCACCCTGCTCACTGTGCCGGAGGTTTCCAGCCTGGCCCTACCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp GGAACAGCGATGTCCCCTCCACTTCCTCCTGGGAGATaGAGGCTGGGTGCCTATGTGCCAGGCTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GTAMSPPLPPGR*RLGAYVPGSEG
Trigger: CCCCTCTGAGCCTGGCACATAGGCACCCAGCCTGCATCTCCCAGGAGGAAGTGGAGGGGACATCGCTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000492037.5
ENST00000579000.5
ENST00000580029.1
ENST00000580825.5
CDS GCA 72 bp AGGCTGGAAACCTCCGGCACAGTGAGCAGGGTGCTATaGTCCTGCCAACTCGGGGACAGGCACAGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: RLETSGTVSRVL*SCQLGDRHRGC
Trigger: GCACCCTCTGTGCCTGTCCCCGAGTTGGCAGGAGCATAGCACCCTGCTCACTGTGCCGGAGGTTTCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CCA 72 bp CCTCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PLVRSALRAGTA*QALVSCAGSPA
Trigger: AGCTGGAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394265.5
CDS CAA 72 bp AGGAGTGCTCTGAGAGCCGGAACAGCATGGCAGGCGTaGGTCTCCTGCGCCGGATCTCCAGCTGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: RSALRAGTAWQA*VSCAGSPAEAQ
Trigger: CTGAGCCTCAGCTGGAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394265.5
CDS CAA 90 bp GTTCACTTCGTGAGCCACAGTGACAACAGAAGGTGTGTGCGGTGCTaGCGCTGGTGCCCCGTGAGCCTCCCTCGCTTCCCCCACCTCCCT +
Preference number: 6 (lower is better)
Translates to: VHFVSHSDNRRCVRC*RWCPVSLPRFPHLP
Trigger: AGGGAGGTGGGGGAAGCGAGGGAGGCTCACGGGGCACCAGCGCAAGCACCGCACACACCTTCTGTTGTCACTGTGGCTCACGAAGTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp TTCGTGAGCCACAGTGACAACAGAAGGTGTGTGCGGTaGTTGCGCTGGTGCCCCGTGAGCCTCCCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: FVSHSDNRRCVR*LRWCPVSLPRF
Trigger: GAAGCGAGGGAGGCTCACGGGGCACCAGCGCAAGCACCGCACACACCTTCTGTTGTCACTGTGGCTCACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp GCTGAGGACATAATAGTCTGCAGCCAGTGCAGTCTGTaGCGGGGGATGCGGCATGCTCAGATGCGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: AEDIIVCSQCSL*RGMRHAQMRPP
Trigger: TGGGGGCCGCATCTGAGCATGCCGCATCCCCCGGCACAGACTGCACTGGCTGCAGACTATTATGTCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp TCCCCAGGGTCTCAATCTCTGGGGACAGGGAAAGTGTaGCCTCTCCCTCCTGCGGCTGGGAGGTGTCATGTC +
Preference number: 6 (lower is better)
Translates to: SPGSQSLGTGKV*PLPPAAGRCHV
Trigger: GACATGACACCTCCCAGCCGCAGGAGGGAGAGGGCACACTTTCCCTGTCCCCAGAGATTGAGACCCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583446.5
CDS CCA 72 bp CCTCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCATCTCCA +
Preference number: 6 (lower is better)
Translates to: PLVRSALRAGTA*QALVSCAGSSP
Trigger: TGGAGATGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254079.9
ENST00000580825.5
CDS CCA 72 bp CAGCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCATCTCCA +
Preference number: 6 (lower is better)
Translates to: QLVRSALRAGTA*QALVSCAGSSP
Trigger: TGGAGATGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579000.5
CDS CCA 72 bp GCGCCCGGGTGCTCGGAGGGAGGGTTTAGGGGAAACTaGCCAATGAGCATGGAGAATCGTGTTCTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: APGCSEGGFRGN*PMSMENRVLLG
Trigger: CCCCAGGAGAACACGATTCTCCATGCTCATTGGCCAGTTTCCCCTAAACCCTCCCTCCGAGCACCCGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580825.5
CDS CCA 72 bp GTGGTCCACCACAGGCTGGTGAAGAGGAGCTGCAGGTaGAGTCCCTTCCACGCGGATGCCTGCTGGTTGTCT +
Preference number: 6 (lower is better)
Translates to: VVHHRLVKRSCR*SPFHADACWLS
Trigger: AGACAACCAGCAGGCATCCGCGTGGAAGGGACTCCACCTGCAGCTCCTCTTCACCAGCCTGTGGTGGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS TCA 72 bp CCAGCGGGGGAGGAGAGTTCACTTCGTGAGCCACAGTaGCAACAGAAGGTGTGTGCGGTGCTTGCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PAGEESSLREPQ*QQKVCAVLALV
Trigger: CACCAGCGCAAGCACCGCACACACCTTCTGTTGTCACTGTGGCTCACGAAGTGAACTCTCCTCCCCCGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp CATAGTCCCCACTCCCTGGCACTGCCCAGTCATAGATaGCAATCCACATACTCCTGCCCCGGGCTCCAAGGG +
Preference number: 6 (lower is better)
Translates to: HSPHSLALPSHR*QSTYSCPGLQG
Trigger: CCCTTGGAGCCCGGGGCAGGAGTATGTGGATTGGCATCTATGACTGGGCAGTGCCAGGGAGTGGGGACTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CCA 72 bp CCTCTGGTGAGGAGTGCTCTGAGAGCCGGAACAGCATaGCAGGCGTTGGTCTCCTGCGCCGGATCTAAGATC +
Preference number: 6 (lower is better)
Translates to: PLVRSALRAGTA*QALVSCAGSKI
Trigger: GATCTTAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCTCACCAGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394267.2
ENST00000580772.1
CDS GCA 72 bp GAAACCTCCGGCACAGTGAGCAGGGTGCTATGCTCCTaGCAACTCGGGGACAGGCACAGAGGGTGCTTTGTA +
Preference number: 6 (lower is better)
Translates to: ETSGTVSRVLCS*QLGDRHRGCFV
Trigger: TACAAAGCACCCTCTGTGCCTGTCCCCGAGTTGGCAGGAGCATAGCACCCTGCTCACTGTGCCGGAGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CAA 72 bp AGGAGTGCTCTGAGAGCCGGAACAGCATGGCAGGCGTaGGTCTCCTGCGCCGGATCTAAGATCAGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: RSALRAGTAWQA*VSCAGSKISSR
Trigger: CCTTGAGCTGATCTTAGATCCGGCGCAGGAGACCAACGCCTGCCATGCTGTTCCGGCTCTCAGAGCACTCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394267.2
ENST00000580772.1
CDS GCA 72 bp GCACTGCCCAGTCATAGATGCCAATCCACATACTCCTaGCCCGGGCTCCAAGGGACAGAACAATTCCGAGGC +
Preference number: 6 (lower is better)
Translates to: ALPSHRCQSTYS*PGLQGTEQFRG
Trigger: GCCTCGGAATTGTTCTGTCCCTTGGAGCCCGGGGCAGGAGTATGTGGATTGGCATCTATGACTGGGCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp CCTCCCATGCGATGCATAGTCCCCACTCCCTGGCACTaGCCAGTCATAGATGCCAATCCACATACTCCTGCC +
Preference number: 6 (lower is better)
Translates to: PPMRCIVPTPWH*PVIDANPHTPA
Trigger: GGCAGGAGTATGTGGATTGGCATCTATGACTGGGCAGTGCCAGGGAGTGGGGACTATGCATCGCATGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp GGCTCACTGCTTACCCTGATCCTACCTCCCATGCGATaGATAGTCCCCACTCCCTGGCACTGCCCAGTCATA +
Preference number: 6 (lower is better)
Translates to: GSLLTLILPPMR*IVPTPWHCPVI
Trigger: TATGACTGGGCAGTGCCAGGGAGTGGGGACTATGCATCGCATGGGAGGTAGGATCAGGGTAAGCAGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp GCCCACAACCCGATGTTAAGGCCCATAGCTGCCCATTaGAGCCTCGGGACTCCTGTGTTTTGCAAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: AHNPMLRPIAAH*SLGTPVFCKAR
Trigger: TCTGGCCTTGCAAAACACAGGAGTCCCGAGGCTGCAATGGGCAGCTATGGGCCTTAACATCGGGTTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS CCA 72 bp TTGGGTTGTTGCGCCACGCTGACAGCGGGCTATGTGTaGCGAAACAATCCCTCCCCACTGACAAAAGCTCCC +
Preference number: 6 (lower is better)
Translates to: LGCCATLTAGYV*RNNPSPLTKAP
Trigger: GGGAGCTTTTGTCAGTGGGGAGGGATTGTTTCGCCACACATAGCCCGCTGTCAGCGTGGCGCAACAACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS CAA 72 bp AGCCCACAACCCGATGTTAAGGCCCATAGCTGCCCATaGCAGCCTCGGGACTCCTGTGTTTTGCAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SPQPDVKAHSCP*QPRDSCVLQGQ
Trigger: CTGGCCTTGCAAAACACAGGAGTCCCGAGGCTGCAATGGGCAGCTATGGGCCTTAACATCGGGTTGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS TCA 72 bp TGCCCCGGGCTCCAAGGGACAGAACAATTCCGAGGCTaGGGACATAATAGTCTGCAGCCAGTGCAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: CPGLQGTEQFRG*GHNSLQPVQSV
Trigger: CACAGACTGCACTGGCTGCAGACTATTATGTCCTCAGCCTCGGAATTGTTCTGTCCCTTGGAGCCCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp AATTCCGAGGCTGAGGACATAATAGTCTGCAGCCAGTaGAGTCTGTGCCGGGGGATGCGGCATGCTCAGATG +
Preference number: 6 (lower is better)
Translates to: NSEAEDIIVCSQ*SLCRGMRHAQM
Trigger: CATCTGAGCATGCCGCATCCCCCGGCACAGACTGCACTGGCTGCAGACTATTATGTCCTCAGCCTCGGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp GGACAGAACAATTCCGAGGCTGAGGACATAATAGTCTaGAGCCAGTGCAGTCTGTGCCGGGGGATGCGGCAT +
Preference number: 6 (lower is better)
Translates to: GQNNSEAEDIIV*SQCSLCRGMRH
Trigger: ATGCCGCATCCCCCGGCACAGACTGCACTGGCTGCAGACTATTATGTCCTCAGCCTCGGAATTGTTCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CAA 72 bp AATACCCCCTCAGGGGCCCAAGTTCAAAGGCCAAAGTaGACAGGTCAGCCTGATGGGTGTCAGACCAGGGCA +
Preference number: 6 (lower is better)
Translates to: NTPSGAQVQRPK*TGQPDGCQTRA
Trigger: TGCCCTGGTCTGACACCCATCAGGCTGACCTGTCAACTTTGGCCTTTGAACTTGGGCCCCTGAGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CAA 90 bp ACCAGGCGGGCACAGCAGCAGCTTAACATTCCCTGGCTGGAGAGCTaGATTTTCCAAGTACCCAGTACGGGAGACAGTGTCTCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: TRRAQQQLNIPWLES*IFQVPSTGDSVSQL
Trigger: AAGCTGGGAGACACTGTCTCCCGTACTGGGTACTTGGAAAATCAAGCTCTCCAGCCAGGGAATGTTAAGCTGCTGCTGTGCCCGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS GCA 72 bp CTTTCAAGCCCACAACCCGATGTTAAGGCCCATAGCTaGCCATTGCAGCCTCGGGACTCCTGTGTTTTGCAA +
Preference number: 6 (lower is better)
Translates to: LSSPQPDVKAHS*PLQPRDSCVLQ
Trigger: TTGCAAAACACAGGAGTCCCGAGGCTGCAATGGGCAGCTATGGGCCTTAACATCGGGTTGTGGGCTTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS CCA 72 bp ATCCTACCTCCCATGCGATGCATAGTCCCCACTCCCTaGCACTGCCCAGTCATAGATGCCAATCCACATACT +
Preference number: 6 (lower is better)
Translates to: ILPPMRCIVPTP*HCPVIDANPHT
Trigger: AGTATGTGGATTGGCATCTATGACTGGGCAGTGCCAGGGAGTGGGGACTATGCATCGCATGGGAGGTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CCA 72 bp AGGGCAGAGGCAGCCAGGGGTAGATTTGATCATGTTTaGCTCTTAAGCTGTCCTAAGATGCTAGCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: RAEAARGRFDHV*LLSCPKMLAPR
Trigger: CCTGGGGGCTAGCATCTTAGGACAGCTTAAGAGCCAAACATGATCAAATCTACCCCTGGCTGCCTCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS TCA 72 bp GCCTGGTTCTCATTCAAATTGCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGCACAGCTGGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: AWFSFKLLIDCR*DSAMRCTAGEE
Trigger: CTCCTCACCAGCTGTGCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAGCAATTTGAATGAGAACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579000.5
CDS TCA 72 bp GCCTGGTTCTCATTCAAATTGCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGCACAGCTGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: AWFSFKLLIDCR*DSAMRCTAGTE
Trigger: CTCTGTGCCAGCTGTGCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAGCAATTTGAATGAGAACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580029.1
CDS CAA 90 bp TTTCTTTCAAGCCCACAACCCGATGTTAAGGCCCATAGCTGCCCATaGCAGCCTCGGGACTCCTGTGTTTTGCAAGGCCAGACTGAGAAA +
Preference number: 6 (lower is better)
Translates to: FLSSPQPDVKAHSCP*QPRDSCVLQGQTEK
Trigger: TTTCTCAGTCTGGCCTTGCAAAACACAGGAGTCCCGAGGCTGCAATGGGCAGCTATGGGCCTTAACATCGGGTTGTGGGCTTGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580772.1
CDS TCA 72 bp GCCTGGTTCTCATTCAAATTGCTGATAGACTGCAGGTaGGACTCAGCAATGCGCTGCACAGCTTTCAGCGAA +
Preference number: 6 (lower is better)
Translates to: AWFSFKLLIDCR*DSAMRCTAFSE
Trigger: TTCGCTGAAAGCTGTGCAGCGCATTGCTGAGTCTCACCTGCAGTCTATCAGCAATTTGAATGAGAACCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254079.9
ENST00000394265.5
ENST00000394267.2
ENST00000580825.5
ENST00000582680.5
ENST00000583446.5