RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R16B (Homo sapiens)

Ensembl gene IDs: ENSG00000101445

Ensembl transcript IDs: ENST00000299824.6, ENST00000373331.2, ENST00000463749.1

Found 851 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTGTGCAGAGCCAGGCCCCGCACGGTGGCACTTGCAATGCCCATaGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCTGTTGGGGAGA +
Preference number: 1 (lower is better)
Translates to: GCAEPGPARWHLQCP*EAGPLANKRDLLGR
Trigger: TCTCCCCAACAGGTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp GGTCTGCAGACTTTTCCTGGGTGTGCAGAGCCAGGCCCCGCACGGTaGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAG +
Preference number: 1 (lower is better)
Translates to: GLQTFPGCAEPGPAR*HLQCPWEAGPLANK
Trigger: CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACACCCAGGAAAAGTCTGCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp TGGCAGCTGGAAGCAACTCCAGGGACATGTGCCCCCTTTGGGATGTaGCTGAGCCACAGTTTTGGACCCAAGGCCCACCGGTGCCGCGTG +
Preference number: 1 (lower is better)
Translates to: WQLEATPGTCAPFGM*LSHSFGPKAHRCRV
Trigger: CACGCGGCACCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTTGCTTCCAGCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 90 bp AGCTGGAAGCAACTCCAGGGACATGTGCCCCCTTTGGGATGTGGCTaGGCCACAGTTTTGGACCCAAGGCCCACCGGTGCCGCGTGGCAA +
Preference number: 1 (lower is better)
Translates to: SWKQLQGHVPPLGCG*ATVLDPRPTGAAWQ
Trigger: TTGCCACGCGGCACCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTTGCTTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp TTTCCTGGGTGTGCAGAGCCAGGCCCCGCACGGTGGCACTTGCAATaGCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCTGTTG +
Preference number: 1 (lower is better)
Translates to: FPGCAEPGPARWHLQ*PWEAGPLANKRDLL
Trigger: CAACAGGTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACACCCAGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp AGACTTTTCCTGGGTGTGCAGAGCCAGGCCCCGCACGGTGGCACTTaGAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACC +
Preference number: 1 (lower is better)
Translates to: RLFLGVQSQAPHGGT*NAHGKQALWPTRET
Trigger: GGTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACACCCAGGAAAAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp CAGGCCTTGGCAGCTGGAAGCAACTCCAGGGACATGTGCCCCCTTTaGGATGTGGCTGAGCCACAGTTTTGGACCCAAGGCCCACCGGTG +
Preference number: 1 (lower is better)
Translates to: QALAAGSNSRDMCPL*DVAEPQFWTQGPPV
Trigger: CACCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTTGCTTCCAGCTGCCAAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp TGGCCTGATGCTGAGAACCTCTCCCCTTCCAGCAGCCACCAAGGGTaGAGTCACTCCCATGGGCCCTCTACTTTCTGGTCCAGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: WPDAENLSPSSSHQG*SHSHGPSTFWSSQL
Trigger: CAGCTGGCTGGACCAGAAAGTAGAGGGCCCATGGGAGTGACTGCACCCTTGGTGGCTGCTGGAAGGGGAGAGGTTCTCAGCATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp ATGCAGGAGGGGATATTGACCACGTGCACCCTGGATTCGCAGACTTaGGGCATCACCACTCCTGCAAGTGCAGGCTGGGAGCCCCTGGGT +
Preference number: 1 (lower is better)
Translates to: MQEGILTTCTLDSQT*GITTPASAGWEPLG
Trigger: ACCCAGGGGCTCCCAGCCTGCACTTGCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAGGGTGCACGTGGTCAATATCCCCTCCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp CCACAGCCTGAGATGTTGAAGAGCCCACCCCAAATGGCAAGGTCGTaGGAAGCATCTGTGCACCTGTCTTCAGCCTCCTGGGCCGCCTCC +
Preference number: 1 (lower is better)
Translates to: PQPEMLKSPPQMARS*EASVHLSSASWAAS
Trigger: GGAGGCGGCCCAGGAGGCTGAAGACAGGTGCACAGATGCTTCCCACGACCTTGCCATTTGGGGTGGGCTCTTCAACATCTCAGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 90 bp GCCATTCACAGTCCTCCCTCCCCAGCACCAGGAAGGCTGGGACTATaGAACTGCAGGGCTGGGCAAGACCCAACTCTAGCCCTACCATGG +
Preference number: 1 (lower is better)
Translates to: AIHSPPSPAPGRLGL*NCRAGQDPTLALPW
Trigger: CCATGGTAGGGCTAGAGTTGGGTCTTGCCCAGCCCTGCAGTTTCATAGTCCCAGCCTTCCTGGTGCTGGGGAGGGAGGACTGTGAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp AGAGGAATAGCCCAGGAGGCAGGAGGCATGCGGAAAAGGAGGGAATaGCCTCAGGCGCTCAGTGGGTTGGGCAGTACGTGCCTTCAGTGT +
Preference number: 1 (lower is better)
Translates to: RGIAQEAGGMRKRRE*PQALSGLGSTCLQC
Trigger: ACACTGAAGGCACGTACTGCCCAACCCACTGAGCGCCTGAGGCCATTCCCTCCTTTTCCGCATGCCTCCTGCCTCCTGGGCTATTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 90 bp CAAGGGATAACCTGCAGCTTATCGGGTACACCAAGAGGTTCTGGCTaGGCCTGTGGGCAGTGCCCATGCCATGGGCATCTCCAAAGGGGG +
Preference number: 1 (lower is better)
Translates to: QGITCSLSGTPRGSG*ACGQCPCHGHLQRG
Trigger: CCCCCTTTGGAGATGCCCATGGCATGGGCACTGCCCACAGGCTCAGCCAGAACCTCTTGGTGTACCCGATAAGCTGCAGGTTATCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATaGAGCAGGAAGCAGAACCACGGGACGTGGGACATGGGATGCTAT +
Preference number: 1 (lower is better)
Translates to: VNQEATTGLVSDGRR*SRKQNHGTWDMGCY
Trigger: ATAGCATCCCATGTCCCACGTCCCGTGGTTCTGCTTCCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTaGGGTGGAGGTGGCCTGATGCTGAGAACCTCTCCCCTTCCAGCA +
Preference number: 1 (lower is better)
Translates to: LGRLHPYSRIHLSWH*GGGGLMLRTSPLPA
Trigger: TGCTGGAAGGGGAGAGGTTCTCAGCATCAGGCCACCTCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp TTTGGGATGTGGCTGAGCCACAGTTTTGGACCCAAGGCCCACCGGTaGCGCGTGGCAAGGGGCTACGTGGAAGTTACCTCAGTACGATAT +
Preference number: 1 (lower is better)
Translates to: FGMWLSHSFGPKAHR*RVARGYVEVTSVRY
Trigger: ATATCGTACTGAGGTAACTTCCACGTAGCCCCTTGCCACGCGGCACCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp ATTCTGTCACAGGCCTTGGCAGCTGGAAGCAACTCCAGGGACATGTaGCCCCTTTGGGATGTGGCTGAGCCACAGTTTTGGACCCAAGGC +
Preference number: 1 (lower is better)
Translates to: ILSQALAAGSNSRDM*PLWDVAEPQFWTQG
Trigger: GCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTTGCTTCCAGCTGCCAAGGCCTGTGACAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp AATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCTGTTaGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTTGCAG +
Preference number: 1 (lower is better)
Translates to: NAHGKQALWPTRETC*GEGYSFWHRGSLLQ
Trigger: CTGCAAAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp CGAGGACTTCTCACCCCTGTCAGGTGTGGCTGGTGGCTCAGACTTTaGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCC +
Preference number: 1 (lower is better)
Translates to: RGLLTPVRCGWWLRL*DNSEQDYGSQLSRS
Trigger: GGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCCAAAGTCTGAGCCACCAGCCACACCTGACAGGGGTGAGAAGTCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp AAGCATCACTCAGGCTCCCTGAAGTCCAGCTCCCTCTCTGGGTTATaGGGCTATGGGGGCCACAGTAGGGGGCTAAGAATGACAAAGAGC +
Preference number: 1 (lower is better)
Translates to: KHHSGSLKSSSLSGL*GYGGHSRGLRMTKS
Trigger: GCTCTTTGTCATTCTTAGCCCCCTACTGTGGCCCCCATAGCCCCATAACCCAGAGAGGGAGCTGGACTTCAGGGAGCCTGAGTGATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 90 bp TCCCTGGCTGAAAACATGAGCCAATGCCTGAGAGTCACCTGTGTGTaGAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTC +
Preference number: 1 (lower is better)
Translates to: SLAENMSQCLRVTCV*SRLLSGNQLGFPAF
Trigger: GAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGGCTCATGTTTTCAGCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 90 bp AAAGGGTCGCTGGACGAAGATGCAGACACTTTGCCTCAGGTGACTTaGATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCA +
Preference number: 1 (lower is better)
Translates to: KGSLDEDADTLPQVT*MGLLMPVVPKGRKP
Trigger: TGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAAAGTGTCTGCATCTTCGTCCAGCGACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp TTAAGTGTTCTCTGTACACCAGTGGCTTCTGGTCTGGTGAATTATTaGGGAGGGCTGGGGGTCTGCAGACTTTTCCTGGGTGTGCAGAGC +
Preference number: 1 (lower is better)
Translates to: LSVLCTPVASGLVNY*GGLGVCRLFLGVQS
Trigger: GCTCTGCACACCCAGGAAAAGTCTGCAGACCCCCAGCCCTCCGCAATAATTCACCAGACCAGAAGCCACTGGTGTACAGAGAACACTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 90 bp GCGGCTTCCCTCAGAACTCCCTACCTTGTAGCTAAGGTTGGCTCATaGGGGATTTCAGCGTCAGTCTGGGCTCATACTGTTTTACAGCCA +
Preference number: 1 (lower is better)
Translates to: AASLRTPYLVAKVGS*GISASVWAHTVLQP
Trigger: TGGCTGTAAAACAGTATGAGCCCAGACTGACGCTGAAATCCCTCATGAGCCAACCTTAGCTACAAGGTAGGGAGTTCTGAGGGAAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp CTAAGGATTCTAGGAGCCGAAAAGCAAAGGGTCGCTGGACGAAGATaGAGACACTTTGCCTCAGGTGACTTGAATGGGACTGCTGATGCC +
Preference number: 1 (lower is better)
Translates to: LRILGAEKQRVAGRR*RHFASGDLNGTADA
Trigger: GGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAAAGTGTCTGCATCTTCGTCCAGCGACCCTTTGCTTTTCGGCTCCTAGAATCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 90 bp TGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCTaGCTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGTAGAG +
Preference number: 1 (lower is better)
Translates to: CLWSPRDGNHKEQFS*LCLIPPLSAEPNVE
Trigger: CTCTACGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp CCCCAAAGATGCTGGCTGAAGGCAGCTATCACTGAAAGTTCCAGATaGACCTGGATGATGTCTGCCTGGAACCCAAGATCCAGCATCTAT +
Preference number: 1 (lower is better)
Translates to: PQRCWLKAAITESSR*TWMMSAWNPRSSIY
Trigger: ATAGATGCTGGATCTTGGGTTCCAGGCAGACATCATCCAGGTCCATCTGGAACTTTCAGTGATAGCTGCCTTCAGCCAGCATCTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp AGATGCTGGCTGAAGGCAGCTATCACTGAAAGTTCCAGATGGACCTaGATGATGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGG +
Preference number: 1 (lower is better)
Translates to: RCWLKAAITESSRWT*MMSAWNPRSSIYTW
Trigger: CCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACATCATCCAGGTCCATCTGGAACTTTCAGTGATAGCTGCCTTCAGCCAGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp CAACAACCACAATGGTCTTATGTTATTACAAAGCCAGCAAACCGGTaGGGCAGGACAGGGGACACACCCTTGTTAGCTTTTCTAAGCCCC +
Preference number: 1 (lower is better)
Translates to: QQPQWSYVITKPANR*GRTGDTPLLAFLSP
Trigger: GGGGCTTAGAAAAGCTAACAAGGGTGTGTCCCCTGTCCTGCCCCACCGGTTTGCTGGCTTTGTAATAACATAAGACCATTGTGGTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp TACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTTaGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAA +
Preference number: 1 (lower is better)
Translates to: YVSELMNDRGSFIGG*SPTCLSTPRRPTGK
Trigger: TTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 90 bp GCAGCTATCACTGAAAGTTCCAGATGGACCTGGATGATGTCTGCCTaGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCC +
Preference number: 1 (lower is better)
Translates to: AAITESSRWTWMMSA*NPRSSIYTWWQMLS
Trigger: GGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACATCATCCAGGTCCATCTGGAACTTTCAGTGATAGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 90 bp AAGCCCCTTGGAAATGGATTAAACAGTGCAGAGCAGTTTTACTTATaGTGTATATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGC +
Preference number: 1 (lower is better)
Translates to: KPLGNGLNSAEQFYL*CIFDGEFYPEVFSS
Trigger: GCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATATACAGCATAAGTAAAACTGCTCTGCACTGTTTAATCCATTTCCAAGGGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTCACCACTCCTGCAAGTaGAGGCTGGGAGCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPHHSCK*RLGAPG
Trigger: CCCAGGGGCTCCCAGCCTGCACTTGCAGGAGTGGTG...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCCCCAGCCAGGGCTGTTaGGCTGGCCTGGATTCCAGG +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPPSQGC*AGLDSR
Trigger: CCTGGAATCCAGGCCAGCCCAACAGCCCTGGCTGGG...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 90 bp CAGACTTTTCCTGGGTGTGCAGAGCCAGGCCCCGCACGGTGGCACTaGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: QTFPGCAEPGPARWH*QCPWEAGPLANKRD
Trigger: GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACACCCAGGAAAAGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTCAGGCTGGGAGCCCCTaGGTGAGGCGGGAACTCAAA +
Preference number: 2 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPQAGSP*VRRELK
Trigger: TTTGAGTTCCCGCCTCACCCAGGGGCTCCCAGCCTG...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGCCAGATGGACCTGGATaGTGTCTGCCTGGAACCCAA +
Preference number: 2 (lower is better)
Translates to: PARWHLQCPWEAGPLANKPDGPG*CLPGTQ
Trigger: TTGGGTTCCAGGCAGACATCATCCAGGTCCATCTGG...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCGGGCATCACCACTCCTaGAAGTGCAGGCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVGHHHS*KCRLGA
Trigger: GGCTCCCAGCCTGCACTTGCAGGAGTGGTGATGCCC...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCCAGGGCTGTTGGGCTaGCCTGGATTCCAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: QQERPVGERAIASGTGGHPGLLG*PGFQEP
Trigger: GGGCTCCTGGAATCCAGGCCAGCCCAACAGCCCTGG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCCTGCAAGTGCAGGCTaGGAGCCCCTGGGTGAGGCG +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVPASAG*EPLGEA
Trigger: CGCCTCACCCAGGGGCTCCCAGCCTGCACTTGCAGG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCCTGCAAGTGCAGGCTaGGAGCCCCTGGGTGAGGCG +
Preference number: 2 (lower is better)
Translates to: PMPESHLCVKSAPVRESAPASAG*EPLGEA
Trigger: CGCCTCACCCAGGGGCTCCCAGCCTGCACTTGCAGG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGCAGTGCCCATGCCATaGGCATCTCCAAAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPAVPMP*ASPKGV
Trigger: GACCCCCTTTGGAGATGCCCATGGCATGGGCACTGC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACTGCTCTTATGTGCCCTaGGGCAGGGGAGACCATCCC +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDCSYVP*GRGDHP
Trigger: GGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCA...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGCTACCATGGCTCTCCTaGATGCAGGAGGGGATATTG +
Preference number: 2 (lower is better)
Translates to: PARWHLQCPWEAGPLANKLPWLS*MQEGIL
Trigger: CAATATCCCCTCCTGCATTCAGGAGAGCCATGGTAG...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGGAAGGCTGGGACTATaGAACTGCAGGGCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPGRLGL*NCRAGQ
Trigger: TTGCCCAGCCCTGCAGTTTCATAGTCCCAGCCTTCC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCACCACTCCTGCAAGTaGAGGCTGGGAGCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQHHSCK*RLGAPG
Trigger: CCCAGGGGCTCCCAGCCTGCACTTGCAGGAGTGGTG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGGGTTGGGCAGTACGTaGCTTCAGTGTTTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDGLGST*LQCLAP
Trigger: AGGGGCCAAACACTGAAGGCACGTACTGCCCAACCC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACTCCCGAATCCACCCCTaGCATGGAGGGAGGCAGATT +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDSRIHP*HGGRQI
Trigger: AATCTGCCTCCCTCCATGGCAGGGGTGGATTCGGGA...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCCAGGGCTGTTGGGCTaGCCTGGATTCCAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQPGLLG*PGFQEP
Trigger: GGGCTCCTGGAATCCAGGCCAGCCCAACAGCCCTGG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCCAGAACCACGGGACGTaGGACATGGGATGCTATGGG +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPQNHGT*DMGCYG
Trigger: CCCATAGCATCCCATGTCCCACGTCCCGTGGTTCTG...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGGTCAGGTGTGGCTGGTaGCTCAGACTTTGGGATAAC +
Preference number: 2 (lower is better)
Translates to: PARWHLQCPWEAGPLANKVRCGW*LRLWDN
Trigger: GTTATCCCAAAGTCTGAGCCACCAGCCACACCTGAC...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGACCCATGTAGATTCCTaGCTCCCTCTGAACACAGCG +
Preference number: 2 (lower is better)
Translates to: PARWHLQCPWEAGPLANKTHVDS*LPLNTA
Trigger: CGCTGTGTTCAGAGGGAGCCAGGAATCTACATGGGT...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGGATGGTCACACAGCTaGCTCCTGGCATGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDGWSHS*LLAWAE
Trigger: TTCTGCCCATGCCAGGAGCCAGCTGTGTGACCATCC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCCCCTCCACCCCTGGATaGTCACACAGCTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: SGDLNGTADACGPQGTETPSTPG*SHSWLL
Trigger: CAGGAGCCAGCTGTGTGACCATCCAGGGGTGGAGGG...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGAGGTGGAGGCAGGCTaGCCCCTAATTGCTTGCTCT +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPEVEAG*PLIACS
Trigger: AGAGCAAGCAATTAGGGGCCAGCCTGCCTCCACCTC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCGGCACAAGGCGGGGATaGTCTTCCAGTCCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: SGDLNGTADACGPQGTETGTRRG*SSSPKP
Trigger: GGGCTTGGGACTGGAAGACCATCCCCGCCTTGTGCC...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCGGGCCCTCTACTTTCTaGTCCAGCCAGCTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLGPSTF*SSQLPC
Trigger: GCAGGGCAGCTGGCTGGACCAGAAAGTAGAGGGCCC...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCATCCTGGCATTGGGGTaGAGGTGGCCTGATGCTGAG +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPILALG*RWPDAE
Trigger: CTCAGCATCAGGCCACCTCCACCCCAATGCCAGGAT...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGGGTCTGAGTTCCTCTaGAAAGCAGAGCCCACCTCT +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDGSEFL*KAEPTS
Trigger: AGAGGTGGGCTCTGCTTTTCAGAGGAACTCAGACCC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGGGGTCTGAGTTCCTCTaGAAAGCAGAGCCCACCTCT +
Preference number: 2 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRGSEFL*KAEPTS
Trigger: AGAGGTGGGCTCTGCTTTTCAGAGGAACTCAGACCC...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTGCAGGAGGGGATATTaGCCACGTGCACCCTGGATT +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPCRRGY*PRAPWI
Trigger: AATCCAGGGTGCACGTGGTCAATATCCCCTCCTGCA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCCAGATGGACCTGGATaGTGTCTGCCTGGAACCCAA +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDPDGPG*CLPGTQ
Trigger: TTGGGTTCCAGGCAGACATCATCCAGGTCCATCTGG...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGACCATTGGAGCCTTTaGTCTTATGTGCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDDHWSL*SYVPWG
Trigger: GCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTACGGGACGTGGGACATaGGATGCTATGGGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGTGRGT*DAMGSQ
Trigger: CTGGCTGCCCATAGCATCCCATGTCCCACGTCCCGT...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCGCATGGGCAGAAGTGTaGCTCTCAACAAGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVAWAEV*LSTRLR
Trigger: CCGCAGCCTTGTTGAGAGCCACACTTCTGCCCATGC...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACAAGACCCCAGGGTGCTaGGCTCTGTCGCTGTTAACT +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDKTPGC*ALSLLT
Trigger: AGTTAACAGCGACAGAGCCCAGCACCCTGGGGTCTT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTGTCAGGGAATCAGCTaGGATTCCCAGCCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPCQGIS*DSQPSG
Trigger: CCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACAATCCACCCCTGCCATaGAGGGAGGCAGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDNPPLP*READSQ
Trigger: TTGGGAATCTGCCTCCCTCCATGGCAGGGGTGGATT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCCCCCTTGCTTCCCCTaGGCCCAGGTATGTCATTCC +
Preference number: 2 (lower is better)
Translates to: PMPESHLCVKSAPVRESAPPCFP*AQVCHS
Trigger: GGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCGGAAGGCTGGGACTATaGAACTGCAGGGCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: SGDLNGTADACGPQGTETGRLGL*NCRAGQ
Trigger: TTGCCCAGCCCTGCAGTTTCATAGTCCCAGCCTTCC...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTATCACTCAGGCTCCCTaGAGTCCAGCTCCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGITQAP*SPAPSL
Trigger: CAGAGAGGGAGCTGGACTTCAGGGAGCCTGAGTGAT...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCTGTGGGCAGTGCCCATaGCATGGGCATCTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLCGQCP*HGHLQR
Trigger: CCTTTGGAGATGCCCATGGCATGGGCACTGCCCACA...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTTCTGGTCCAGCCAGCTaGCCTGCTCCTGGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVSGPAS*PAPGKA
Trigger: TGCTTTCCCAGGAGCAGGGCAGCTGGCTGGACCAGA...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGAGCCATGCAGCACCTaGTTTGGAAGTGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPEPCST*FGSGLL
Trigger: AAGGAGACCACTTCCAAAGCAGGTGCTGCATGGCTC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACAGTACCCCAGTATCCTaGTCTAGGAGAGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDSTPVS*SRRESR
Trigger: CCTGCTCTCTCTCCTAGAGCAGGATACTGGGGTACT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGTCAGGTGTGGCTGGTaGCTCAGACTTTGGGATAAC +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDVRCGW*LRLWDN
Trigger: GTTATCCCAAAGTCTGAGCCACCAGCCACACCTGAC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCCTGTCAGGTGTGGCTaGTGGCTCAGACTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVPVRCG*WLRLWD
Trigger: ATCCCAAAGTCTGAGCCACCAGCCACACCTGACAGG...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCGGATGGTCACACAGCTaGCTCCTGGCATGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: SGDLNGTADACGPQGTETGWSHS*LLAWAE
Trigger: TTCTGCCCATGCCAGGAGCCAGCTGTGTGACCATCC...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACCCCTCCACCCCTGGATaGTCACACAGCTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENPSTPG*SHSWLL
Trigger: CAGGAGCCAGCTGTGTGACCATCCAGGGGTGGAGGG...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCGAGGTGGAGGCAGGCTaGCCCCTAATTGCTTGCTCT +
Preference number: 2 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLEVEAG*PLIACS
Trigger: AGAGCAAGCAATTAGGGGCCAGCCTGCCTCCACCTC...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGTCCAGCTCCCTCTCTaGGTTATGGGGCTATGGGGG +
Preference number: 2 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQVQLPL*VMGLWG
Trigger: CCCCCATAGCCCCATAACCCAGAGAGGGAGCTGGAC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGAGGCGCTCAGTGGGTTaGGCAGTACGTGCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: VSNLSLNTQETYRESSPGRRSVG*AVRAFS
Trigger: ACTGAAGGCACGTACTGCCCAACCCACTGAGCGCCT...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTCCCAGCCTTCTGGGTaGAGAGGAATAGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: QQERPVGERAIASGTGGHSQPSG*RGIAQE
Trigger: CTCCTGGGCTATTCCTCTCCACCCAGAAGGCTGGGA...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 90 bp CAAAGGGTCGCTGGACGAAGATGCAGACACTTTGCCTCAGGTGACTaGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACC +
Preference number: 2 (lower is better)
Translates to: QRVAGRRCRHFASGD*NGTADACGPQGTET
Trigger: GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAAAGTGTCTGCATCTTCGTCCAGCGACCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTCTGAGGGCTGGGGTCTaGGTTCCTCTGAAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGLRAGV*VPLKSR
Trigger: TCTGCTTTTCAGAGGAACTCAGACCCCAGCCCTCAG...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCACACCCTTCTGCCTTTaGCACTTCCATCCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPTPFCL*HFHPRG
Trigger: TCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGT...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCTGACTCTGCACACATaGCTGATGGAGGTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QQERPVGERAIASGTGGHLTLHT*LMEVEG
Trigger: CCCTTCCACCTCCATCAGTCATGTGTGCAGAGTCAG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTATCACTCAGGCTCCCTaGAGTCCAGCTCCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: QERPVGERAIASGTGGHFITQAP*SPAPSL
Trigger: CAGAGAGGGAGCTGGACTTCAGGGAGCCTGAGTGAT...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGAAGGCAGCTATCACTaGAAGTTCCAGATGGACCTG +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDEGSYH*KFQMDL
Trigger: CAGGTCCATCTGGAACTTTCAGTGATAGCTGCCTTC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCCCACCTCTCCCCAGCTaGCCTGACACCTCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTPPLPS*PDTSPA
Trigger: GGCTGGGGAGGTGTCAGGGCAGCTGGGGAGAGGTGG...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCACCACCTCTCCCCAGCTaGCCTGACACCTCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPPPLPS*PDTSPA
Trigger: GGCTGGGGAGGTGTCAGGGCAGCTGGGGAGAGGTGG...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAAGACCCCAGGGTaGTGGGCTCTGTCGCTGTTA +
Preference number: 2 (lower is better)
Translates to: SGDLNGTADACGPQGTETTKTPG*WALSLL
Trigger: TAACAGCGACAGAGCCCAGCACCCTGGGGTCTTTGT...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCAGAACCACGGGACGTaGGACATGGGATGCTATGGG +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVQNHGT*DMGCYG
Trigger: CCCATAGCATCCCATGTCCCACGTCCCGTGGTTCTG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCACCCCTGTCAGGTGTaGCTGGTGGCTCAGACTTTG +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVHPCQV*LVAQTL
Trigger: CAAAGTCTGAGCCACCAGCCACACCTGACAGGGGTG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCACCCATGTAGATTCCTaGCTCCCTCTGAACACAGCG +
Preference number: 2 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVTHVDS*LPLNTA
Trigger: CGCTGTGTTCAGAGGGAGCCAGGAATCTACATGGGT...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACTTGGCTGAGATGGGCTaGGCTGAAACAGTCTGGATA +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDLAEMG*AETVWI
Trigger: TATCCAGACTGTTTCAGCCCAGCCCATCTCAGCCAA...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTCAGCACCAGGAAGGCTaGGACTATGAAACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGQHQEG*DYETAG
Trigger: CCCTGCAGTTTCATAGTCCCAGCCTTCCTGGTGCTG...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCTACACCAAGAGGTTCTaGCTGAGCCTGTGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: SGDLNGTADACGPQGTETYTKRF*LSLWAV
Trigger: CACTGCCCACAGGCTCAGCCAGAACCTCTTGGTGTA...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTTCCCTCTCTGGGTTATaGGGCTATGGGGGCCACAGT +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVSLSGL*GYGGHS
Trigger: ACTGTGGCCCCCATAGCCCCATAACCCAGAGAGGGA...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCATCTATCCTGGCATTaGGGTGGAGGTGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLHLSWH*GGGGLM
Trigger: CATCAGGCCACCTCCACCCCAATGCCAGGATAGATG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTAGGCGCTCAGTGGGTTaGGCAGTACGTGCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVRRSVG*AVRAFS
Trigger: ACTGAAGGCACGTACTGCCCAACCCACTGAGCGCCT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTGGATGATGTCTGCCTaGAACCCAAGATCCAGCATC +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPWMMSA*NPRSSI
Trigger: GATGCTGGATCTTGGGTTCCAGGCAGACATCATCCA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCTGAGGGCTGGGGTCTaGGTTCCTCTGAAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: QERPVGERAIASGTGGHFLRAGV*VPLKSR
Trigger: TCTGCTTTTCAGAGGAACTCAGACCCCAGCCCTCAG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTATTCCTGGCTCCCTCTaGACACAGCGAGGACTTCTC +
Preference number: 2 (lower is better)
Translates to: QERPVGERAIASGTGGHFIPGSL*TQRGLL
Trigger: GAGAAGTCCTCGCTGTGTTCAGAGGGAGCCAGGAAT...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGGCTAAGGTTGGCTCATaGGGGATTTCAGCGTCAGTC +
Preference number: 2 (lower is better)
Translates to: VSNLSLNTQETYRESSPGAKVGS*GISASV
Trigger: GACTGACGCTGAAATCCCTCATGAGCCAACCTTAGC...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTGGTTTATCCCTGGCTaGAAACATGAGCCAATGCCT +
Preference number: 2 (lower is better)
Translates to: LTIGAFALMCPGAGETIPWFIPG*KHEPMP
Trigger: AGGCATTGGCTCATGTTTTCAGCCAGGGATAAACCA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCGGGATATTGACCACGTaGACCCTGGATTCGCAGACT +
Preference number: 2 (lower is better)
Translates to: SGDLNGTADACGPQGTETGILTT*TLDSQT
Trigger: AGTCTGCGAATCCAGGGTGCACGTGGTCAATATCCC...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCAGGCCTTGTGTCAGATaGCAGACGATGCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: SGDLNGTADACGPQGTETRPCVR*QTMQQE
Trigger: TTCCTGCTGCATCGTCTGCCATCTGACACAAGGCCT...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAACGGAAAAGGAGGGAATaGCCTCAGGCGCTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: HWRLVSNLSLNTQETYRERKRRE*PQALSG
Trigger: CCCACTGAGCGCCTGAGGCCATTCCCTCCTTTTCCG...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCCGCGGCTCATTCATTaGAGGTTGGTCTCCAACTTG +
Preference number: 2 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLPRLIH*RLVSNL
Trigger: CAAGTTGGAGACCAACCTCCAATGAATGAGCCGCGG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGTCCAGCATCTATACTTaGTGGCAAATGTTATCCAGG +
Preference number: 2 (lower is better)
Translates to: PARWHLQCPWEAGPLANKSSIYT*WQMLSR
Trigger: CCTGGATAACATTTGCCACCAAGTATAGATGCTGGA...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACACACCCTTCTGCCTTTaGCACTTCCATCCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: QQERPVGERAIASGTGGHTPFCL*HFHPRG
Trigger: TCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGT...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCCTAATTGCTTGCTCTaGCAGCTCAGTCTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: QQERPVGERAIASGTGGHPNCLL*QLSLRR
Trigger: CCTCCTTAGACTGAGCTGTCAGAGCAAGCAATTAGG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCTGGGAGCCCCTGGGTaGGGCGGGAACTCAAAAGGG +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTLGAPG*GGNSKG
Trigger: CCCTTTTGAGTTCCCGCCTCACCCAGGGGCTCCCAG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCTACCATGGCTCTCCTaGATGCAGGAGGGGATATTG +
Preference number: 2 (lower is better)
Translates to: PMPESHLCVKSAPVRESALPWLS*MQEGIL
Trigger: CAATATCCCCTCCTGCATTCAGGAGAGCCATGGTAG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGCTAAGGTTGGCTCATaGGGGATTTCAGCGTCAGTC +
Preference number: 2 (lower is better)
Translates to: PMPESHLCVKSAPVRESAAKVGS*GISASV
Trigger: GACTGACGCTGAAATCCCTCATGAGCCAACCTTAGC...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAGGGCATCACCACTCCTaGAAGTGCAGGCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPGHHHS*KCRLGA
Trigger: GGCTCCCAGCCTGCACTTGCAGGAGTGGTGATGCCC...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAGAGCAAGGGATAACCTaGAGCTTATCGGGTACACCA +
Preference number: 2 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGEQGIT*SLSGTP
Trigger: TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTC...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTATGAAACTGCAGGGCTaGGCAAGACCCAACTCTAGC +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVMKLQG*ARPNSS
Trigger: GCTAGAGTTGGGTCTTGCCCAGCCCTGCAGTTTCAT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 90 bp ACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTaGCAGAGTCATCCACTGACCATTGGAGCCTTTGCTCTTATGTGC +
Preference number: 2 (lower is better)
Translates to: TCWGEGYSFWHRGSL*QSHPLTIGAFALMC
Trigger: GCACATAAGAGCAAAGGCTCCAATGGTCAGTGGATGACTCTGCAAAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCACTTTGGTAAATACTaGCCTTGTCCCCCTCCCACA +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVHFGKY*PCPPPT
Trigger: TGTGGGAGGGGGACAAGGTCAGTATTTACCAAAGTG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGAAAGAGCAGATCCCATaGCCAAAGTTGTGGCACAAG +
Preference number: 2 (lower is better)
Translates to: VSNLSLNTQETYRESSPGKEQIP*PKLWHK
Trigger: CTTGTGCCACAACTTTGGTCATGGGATCTGCTCTTT...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCAAGCAGCCACCAAGGGTaGAGTCACTCCCATGGGCCC +
Preference number: 2 (lower is better)
Translates to: CLPGTQDPASILGGKCYPSSHQG*SHSHGP
Trigger: GGGCCCATGGGAGTGACTGCACCCTTGGTGGCTGCT...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCGAAAACATGAGCCAATaGCTGAGAGTCACCTGTGTG +
Preference number: 2 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLENMSQ*LRVTCV
Trigger: CACACAGGTGACTCTCAGGCATTGGCTCATGTTTTC...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACAATCTAATGAGGAGCTaGCATAGGACCTGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: QQERPVGERAIASGTGGHNLMRS*HRTWVS
Trigger: TGAGACCCAGGTCCTATGGCAGCTCCTCATTAGATT...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGTGGTGGCTCAGACTTTaGGATAACTCTGAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQWWLRL*DNSEQD
Trigger: GTCCTGCTCAGAGTTATCCCAAAGTCTGAGCCACCA...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTGCATGGGCAGAAGTGTaGCTCTCAACAAGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIAWAEV*LSTRLR
Trigger: CCGCAGCCTTGTTGAGAGCCACACTTCTGCCCATGC...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTTTGGCTGAGATGGGCTaGGCTGAAACAGTCTGGATA +
Preference number: 2 (lower is better)
Translates to: PMPESHLCVKSAPVRESALAEMG*AETVWI
Trigger: TATCCAGACTGTTTCAGCCCAGCCCATCTCAGCCAA...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGGCCTCAGGCGCTCAGTaGGTTGGGCAGTACGTGCCT +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTASGAQ*VGQYVP
Trigger: AGGCACGTACTGCCCAACCCACTGAGCGCCTGAGGC...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 90 bp TGTGTTTTAGATCATCCTGTCCTGTTCCAGCCACAGCCTGAGATGTaGAAGAGCCCACCCCAAATGGCAAGGTCGTGGGAAGCATCTGTG +
Preference number: 2 (lower is better)
Translates to: CVLDHPVLFQPQPEM*KSPPQMARSWEASV
Trigger: CACAGATGCTTCCCACGACCTTGCCATTTGGGGTGGGCTCTTCAACATCTCAGGCTGTGGCTGGAACAGGACAGGATGATCTAAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 90 bp TTTAAGTGTTCTCTGTACACCAGTGGCTTCTGGTCTGGTGAATTATaGCGGAGGGCTGGGGGTCTGCAGACTTTTCCTGGGTGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: FKCSLYTSGFWSGEL*RRAGGLQTFPGCAE
Trigger: CTCTGCACACCCAGGAAAAGTCTGCAGACCCCCAGCCCTCCGCAATAATTCACCAGACCAGAAGCCACTGGTGTACAGAGAACACTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGTGTGTGTGTTAATGTaGCATGCATGTACTGATCCG +
Preference number: 2 (lower is better)
Translates to: QQERPVGERAIASGTGGHVCVLM*HACTDP
Trigger: CGGATCAGTACATGCATGTCACATTAACACACACAC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAATCAGATGGCAGACGATaGAGCAGGAAGCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: HWRLVSNLSLNTQETYRESDGRR*SRKQNH
Trigger: GTGGTTCTGCTTCCTGCTGCATCGTCTGCCATCTGA...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGAAAACATGAGCCAATaGCTGAGAGTCACCTGTGTG +
Preference number: 2 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQENMSQ*LRVTCV
Trigger: CACACAGGTGACTCTCAGGCATTGGCTCATGTTTTC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCCACCCCTGTCAGGTGTaGCTGGTGGCTCAGACTTTG +
Preference number: 2 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTHPCQV*LVAQTL
Trigger: CAAAGTCTGAGCCACCAGCCACACCTGACAGGGGTG...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTACTGGCCTCTCTCCCTaGAAAAGCATTCCAATGGAA +
Preference number: 2 (lower is better)
Translates to: PMPESHLCVKSAPVRESATGLSP*KSIPME
Trigger: TTCCATTGGAATGCTTTTCCAGGGAGAGAGGCCAGT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTGGGCTGAAACAGTCTaGATATTCACAAAGACCCCA +
Preference number: 2 (lower is better)
Translates to: QQERPVGERAIASGTGGHWAETV*IFTKTP
Trigger: TGGGGTCTTTGTGAATATCCAGACTGTTTCAGCCCA...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCACAAAAAGGCAAAAGCTaGGCCCGGGATCCCGAGCAC +
Preference number: 2 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPQKGKS*ARDPEH
Trigger: GTGCTCGGGATCCCGGGCCCAGCTTTTGCCTTTTTG...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAATGAAACTGCAGGGCTaGGCAAGACCCAACTCTAGC +
Preference number: 2 (lower is better)
Translates to: HWRLVSNLSLNTQETYREMKLQG*ARPNSS
Trigger: GCTAGAGTTGGGTCTTGCCCAGCCCTGCAGTTTCAT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTCCCTCTCTGGGTTATaGGGCTATGGGGGCCACAGT +
Preference number: 2 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTSLSGL*GYGGHS
Trigger: ACTGTGGCCCCCATAGCCCCATAACCCAGAGAGGGA...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGGTCCAGCTCCCTCTCTaGGTTATGGGGCTATGGGGG +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTVQLPL*VMGLWG
Trigger: CCCCCATAGCCCCATAACCCAGAGAGGGAGCTGGAC...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCATGGGAGACTCAGCAGTaGGGGGAGAACAGCCATTCA +
Preference number: 2 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPWETQQ*GENSHS
Trigger: TGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCA...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACATAAATGAGCCACCATaGGCAAGAAACAATGACTTT +
Preference number: 2 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDINEPP*ARNNDF
Trigger: AAAGTCATTGTTTCTTGCTCATGGTGGCTCATTTAT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGTGTGGGCAGTGCCCATaGCATGGGCATCTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTCGQCP*HGHLQR
Trigger: CCTTTGGAGATGCCCATGGCATGGGCACTGCCCACA...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCCCAGCCAGGGCTGTTaGGCTGGCCTGGATTCCAGG +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFPSQGC*AGLDSR
Trigger: CCTGGAATCCAGGCCAGCCCAACAGCCCTGGCTGGG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCAAAAAGGCAAAAGCTaGGCCCGGGATCCCGAGCAC +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTQKGKS*ARDPEH
Trigger: GTGCTCGGGATCCCGGGCCCAGCTTTTGCCTTTTTG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTACACCAAGAGGTTCTaGCTGAGCCTGTGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTYTKRF*LSLWAV
Trigger: CACTGCCCACAGGCTCAGCCAGAACCTCTTGGTGTA...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGAATACATCTATCCTaGCATTGGGGTGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: HWRLVSNLSLNTQETYRERIHLS*HWGGGG
Trigger: GCCACCTCCACCCCAATGCCAGGATAGATGTATTCT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTGTCAGGGAATCAGCTaGGATTCCCAGCCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTCQGIS*DSQPSG
Trigger: CCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACA...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTTCATCCACTGACCATTaGAGCCTTTGCTCTTATGTG +
Preference number: 2 (lower is better)
Translates to: QERPVGERAIASGTGGHFSSTDH*SLCSYV
Trigger: CACATAAGAGCAAAGGCTCCAATGGTCAGTGGATGA...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGATTCCTGGCTCCCTCTaGACACAGCGAGGACTTCTC +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTIPGSL*TQRGLL
Trigger: GAGAAGTCCTCGCTGTGTTCAGAGGGAGCCAGGAAT...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAGGGATATTGACCACGTaGACCCTGGATTCGCAGACT +
Preference number: 2 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPGILTT*TLDSQT
Trigger: AGTCTGCGAATCCAGGGTGCACGTGGTCAATATCCC...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCAGGCCTTGTGTCAGATaGCAGACGATGCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTRPCVR*QTMQQE
Trigger: TTCCTGCTGCATCGTCTGCCATCTGACACAAGGCCT...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACCTGTCAGGTGTGGCTaGTGGCTCAGACTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: CLPGTQDPASILGGKCYPPVRCG*WLRLWD
Trigger: ATCCCAAAGTCTGAGCCACCAGCCACACCTGACAGG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAACTGGCCTCTCTCCCTaGAAAAGCATTCCAATGGAA +
Preference number: 2 (lower is better)
Translates to: HWRLVSNLSLNTQETYRETGLSP*KSIPME
Trigger: TTCCATTGGAATGCTTTTCCAGGGAGAGAGGCCAGT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGAAGACCCCAGGGTGCTaGGCTCTGTCGCTGTTAACT +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTKTPGC*ALSLLT
Trigger: AGTTAACAGCGACAGAGCCCAGCACCCTGGGGTCTT...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACTGGATTCGCAGACTTaGGGCATCACCACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: CLPGTQDPASILGGKCYPLDSQT*GITTPA
Trigger: TGCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTATTTCAGCGTCAGTCTaGGCTCATACTGTTTTACAG +
Preference number: 2 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVISASV*AHTVLQ
Trigger: CTGTAAAACAGTATGAGCCCAGACTGACGCTGAAAT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTGCCTCAGGCGCTCAGTaGGTTGGGCAGTACGTGCCT +
Preference number: 2 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGASGAQ*VGQYVP
Trigger: AGGCACGTACTGCCCAACCCACTGAGCGCCTGAGGC...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 90 bp TTCAGTTGTTTGGGGCATATGATGGTGAGCCATGCAGCACCTGCTTaGGAAGTGGTCTCCTTTAATCTAATGAGGAGCTGCCATAGGACC +
Preference number: 2 (lower is better)
Translates to: FSCLGHMMVSHAAPA*EVVSFNLMRSCHRT
Trigger: GGTCCTATGGCAGCTCCTCATTAGATTAAAGGAGACCACTTCCAAAGCAGGTGCTGCATGGCTCACCATCATATGCCCCAAACAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCCACTTTGGTAAATACTaGCCTTGTCCCCCTCCCACA +
Preference number: 2 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTHFGKY*PCPPPT
Trigger: TGTGGGAGGGGGACAAGGTCAGTATTTACCAAAGTG...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGTCAGATGGCAGACGATaGAGCAGGAAGCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTSDGRR*SRKQNH
Trigger: GTGGTTCTGCTTCCTGCTGCATCGTCTGCCATCTGA...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCATTCCAGGAACGAAATTaGCTGGTTTTCCCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPFQERN*LVFPLH
Trigger: GTGGAGGGGGAAAACCAGGCAATTTCGTTCCTGGAA...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCAGTCGCTGGACGAAGATaGAGACACTTTGCCTCAGGT +
Preference number: 2 (lower is better)
Translates to: CLPGTQDPASILGGKCYPVAGRR*RHFASG
Trigger: ACCTGAGGCAAAGTGTCTGCATCTTCGTCCAGCGAC...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTGCAGTGCCCATGCCATaGGCATCTCCAAAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGAVPMP*ASPKGV
Trigger: GACCCCCTTTGGAGATGCCCATGGCATGGGCACTGC...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAGTGGTAATGAGACTCTaGGTCTTAACTTCCATCCTT +
Preference number: 2 (lower is better)
Translates to: HWRLVSNLSLNTQETYREVVMRL*VLTSIL
Trigger: AAGGATGGAAGTTAAGACTCAGAGTCTCATTACCAC...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCCTAATTGCTTGCTCTaGCAGCTCAGTCTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTPNCLL*QLSLRR
Trigger: CCTCCTTAGACTGAGCTGTCAGAGCAAGCAATTAGG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTGTTCCAGCCACAGCCTaGGATGTTGAAGAGCCCACC +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFVPATA*DVEEPT
Trigger: GGTGGGCTCTTCAACATCTCAGGCTGTGGCTGGAAC...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGTGGTGGCTCAGACTTTaGGATAACTCTGAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTWWLRL*DNSEQD
Trigger: GTCCTGCTCAGAGTTATCCCAAAGTCTGAGCCACCA...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCCTCAAAAGGGCTGACTaGCAAATCTGTCTCACCAAG +
Preference number: 2 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTLKRAD*QICLTK
Trigger: CTTGGTGAGACAGATTTGCCAGTCAGCCCTTTTGAG...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTTCCCAGCCTTCTGGGTaGAGAGGAATAGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGSQPSG*RGIAQE
Trigger: CTCCTGGGCTATTCCTCTCCACCCAGAAGGCTGGGA...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCATTCCTACACACACTaGTCGAGCTTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTHSYTH*SSLCVC
Trigger: ACACACACACAAGCTCGATCAGTGTGTGTAGGAATG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCACAGCCTGAGATGTTaGAGAGCCCACCCCAAATGG +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFHSLRC*RAHPKW
Trigger: CCATTTGGGGTGGGCTCTTCAACATCTCAGGCTGTG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGGTGACATGCATGTACTaGTCCGGAGAAGCCTTTATA +
Preference number: 2 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTVTCMY*SGEAFI
Trigger: TATAAAGGCTTCTCCGGATCAGTACATGCATGTCAC...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTGGAACTCAAAAGGGCTaGCTGGCAAATCTGTCTCAC +
Preference number: 2 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGGTQKG*LANLSH
Trigger: GTGAGACAGATTTGCCAGTCAGCCCTTTTGAGTTCC...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCATTCCTACACACACTaGTCGAGCTTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGHSYTH*SSLCVC
Trigger: ACACACACACAAGCTCGATCAGTGTGTGTAGGAATG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR GCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTAATCTAATGAGGAGCTaGCATAGGACCTGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFNLMRS*HRTWVS
Trigger: TGAGACCCAGGTCCTATGGCAGCTCCTCATTAGATT...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAGAGGAAAACATGATTTaGTTGATTCCAGGAACGAAA +
Preference number: 2 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPEENMI*LIPGTK
Trigger: TTTCGTTCCTGGAATCAACCAAATCATGTTTTCCTC...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTGTGTGTGTGTTAATGTaGCATGCATGTACTGATCCG +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFVCVLM*HACTDP
Trigger: CGGATCAGTACATGCATGTCACATTAACACACACAC...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACTGTTTTACAGCCAATaGTACGTGTGTTTTAGATCA +
Preference number: 2 (lower is better)
Translates to: CLPGTQDPASILGGKCYPLFYSQ*YVCFRS
Trigger: TGATCTAAAACACACGTACCATTGGCTGTAAAACAG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTCATTCATTGGAGGTTaGTCTCCAACTTGTCTCTCA +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFSFIGG*SPTCLS
Trigger: TGAGAGACAAGTTGGAGACCAACCTCCAATGAATGA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTAGCATCTATACTTGGTaGCAAATGTTATCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFSIYTW*QMLSRG
Trigger: ACCCCTGGATAACATTTGCCACCAAGTATAGATGCT...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTCCAGCATCTATACTTaGTGGCAAATGTTATCCAGG +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFSSIYT*WQMLSR
Trigger: CCTGGATAACATTTGCCACCAAGTATAGATGCTGGA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR TCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTGGACTATGTAATAAATaGGCCACCATGAGCAAGAAA +
Preference number: 2 (lower is better)
Translates to: YLMENSILKSLVALGLEFGLCNK*ATMSKK
Trigger: TTTCTTGCTCATGGTGGCTCATTTATTACATAGTCC...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTGAGGAAAACATGATTTaGTTGATTCCAGGAACGAAA +
Preference number: 2 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGEENMI*LIPGTK
Trigger: TTTCGTTCCTGGAATCAACCAAATCATGTTTTCCTC...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 72 bp CTGGGTGTGCAGAGCCAGGCCCCGCACGGTGGCACTTaGAATGCCCATGGGAAGCAGGCCCTCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: LGVQSQAPHGGT*NAHGKQALWPT
Trigger: TGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GCCCAGGAGGCAGGAGGCATGCGGAAAAGGAGGGAATaGCCTCAGGCGCTCAGTGGGTTGGGCAGTACGTGC +
Preference number: 3 (lower is better)
Translates to: AQEAGGMRKRRE*PQALSGLGSTC
Trigger: GCACGTACTGCCCAACCCACTGAGCGCCTGAGGCCATTCCCTCCTTTTCCGCATGCCTCCTGCCTCCTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp ATGTGCCCCCTTTGGGATGTGGCTGAGCCACAGTTTTaGACCCAAGGCCCACCGGTGCCGCGTGGCAAGGGG +
Preference number: 3 (lower is better)
Translates to: MCPLWDVAEPQF*TQGPPVPRGKG
Trigger: CCCCTTGCCACGCGGCACCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGCACAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 72 bp TGTGCAGAGCCAGGCCCCGCACGGTGGCACTTGCAATaGCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGA +
Preference number: 3 (lower is better)
Translates to: CAEPGPARWHLQ*PWEAGPLANKR
Trigger: TCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GATGCAGCAGGAAGCAGAACCACGGGACGTGGGACATaGGATGCTATGGGCAGCCAGCTGAGGGCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: DAAGSRTTGRGT*DAMGSQLRAGV
Trigger: GACCCCAGCCCTCAGCTGGCTGCCCATAGCATCCCATGTCCCACGTCCCGTGGTTCTGCTTCCTGCTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GGCAGACGATGCAGCAGGAAGCAGAACCACGGGACGTaGGACATGGGATGCTATGGGCAGCCAGCTGAGGGC +
Preference number: 3 (lower is better)
Translates to: GRRCSRKQNHGT*DMGCYGQPAEG
Trigger: GCCCTCAGCTGGCTGCCCATAGCATCCCATGTCCCACGTCCCGTGGTTCTGCTTCCTGCTGCATCGTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp CCCTTCCAGCAGCCACCAAGGGTGCAGTCACTCCCATaGGCCCTCTACTTTCTGGTCCAGCCAGCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: PFQQPPRVQSLP*ALYFLVQPAAL
Trigger: CAGGGCAGCTGGCTGGACCAGAAAGTAGAGGGCCCATGGGAGTGACTGCACCCTTGGTGGCTGCTGGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp ACTTTTCCTGGGTGTGCAGAGCCAGGCCCCGCACGGTaGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: TFPGCAEPGPAR*HLQCPWEAGPL
Trigger: CAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACACCCAGGAAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp CAACTCCAGGGACATGTGCCCCCTTTGGGATGTGGCTaGGCCACAGTTTTGGACCCAAGGCCCACCGGTGCC +
Preference number: 3 (lower is better)
Translates to: QLQGHVPPLGCG*ATVLDPRPTGA
Trigger: GGCACCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp CACCACTCCTGCAAGTGCAGGCTGGGAGCCCCTGGGTaGGGCGGGAACTCAAAAGGGCTGACTGGCAAATCT +
Preference number: 3 (lower is better)
Translates to: HHSCKCRLGAPG*GGNSKGLTGKS
Trigger: AGATTTGCCAGTCAGCCCTTTTGAGTTCCCGCCTCACCCAGGGGCTCCCAGCCTGCACTTGCAGGAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 72 bp GAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATaGAGCAGGAAGCAGAACCACGGGACGTGGGACATG +
Preference number: 3 (lower is better)
Translates to: EATTGLVSDGRR*SRKQNHGTWDM
Trigger: CATGTCCCACGTCCCGTGGTTCTGCTTCCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp AGATCCCATGACCAAAGTTGTGGCACAAGGCGGGGATaGTCTTCCAGTCCCAAGCCCCTAGCCCAGGTGCCC +
Preference number: 3 (lower is better)
Translates to: RSHDQSCGTRRG*SSSPKPLAQVP
Trigger: GGGCACCTGGGCTAGGGGCTTGGGACTGGAAGACCATCCCCGCCTTGTGCCACAACTTTGGTCATGGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GGAAAAGGAGGGAATGGCCTCAGGCGCTCAGTGGGTTaGGCAGTACGTGCCTTCAGTGTTTGGCCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: GKGGNGLRRSVG*AVRAFSVWPLS
Trigger: GCTCAGGGGCCAAACACTGAAGGCACGTACTGCCCAACCCACTGAGCGCCTGAGGCCATTCCCTCCTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp CATGCGGAAAAGGAGGGAATGGCCTCAGGCGCTCAGTaGGTTGGGCAGTACGTGCCTTCAGTGTTTGGCCCC +
Preference number: 3 (lower is better)
Translates to: HAEKEGMASGAQ*VGQYVPSVFGP
Trigger: GGGGCCAAACACTGAAGGCACGTACTGCCCAACCCACTGAGCGCCTGAGGCCATTCCCTCCTTTTCCGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCTGTTaGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCA +
Preference number: 3 (lower is better)
Translates to: GKQALWPTRETC*GEGYSFWHRGS
Trigger: TGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GCCACAGTTTTGGACCCAAGGCCCACCGGTGCCGCGTaGCAAGGGGCTACGTGGAAGTTACCTCAGTACGAT +
Preference number: 3 (lower is better)
Translates to: ATVLDPRPTGAA*QGATWKLPQYD
Trigger: ATCGTACTGAGGTAACTTCCACGTAGCCCCTTGCCACGCGGCACCGGTGGGCCTTGGGTCCAAAACTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GAAGCAACTCCAGGGACATGTGCCCCCTTTGGGATGTaGCTGAGCCACAGTTTTGGACCCAAGGCCCACCGG +
Preference number: 3 (lower is better)
Translates to: EATPGTCAPFGM*LSHSFGPKAHR
Trigger: CCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GGGATATTGACCACGTGCACCCTGGATTCGCAGACTTaGGGCATCACCACTCCTGCAAGTGCAGGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: GILTTCTLDSQT*GITTPASAGWE
Trigger: CTCCCAGCCTGCACTTGCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAGGGTGCACGTGGTCAATATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp CTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTaGGTGGAGAGGAATAGCCCAGGAGGCAGGAGGCAT +
Preference number: 3 (lower is better)
Translates to: LLSGNQLGFPAF*VERNSPGGRRH
Trigger: ATGCCTCCTGCCTCCTGGGCTATTCCTCTCCACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GCAGCTGGAAGCAACTCCAGGGACATGTGCCCCCTTTaGGATGTGGCTGAGCCACAGTTTTGGACCCAAGGC +
Preference number: 3 (lower is better)
Translates to: AAGSNSRDMCPL*DVAEPQFWTQG
Trigger: GCCTTGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTTGCTTCCAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCAGGCCACGACAGGCCTaGTGTCAGATGGCAGACGAT +
Preference number: 3 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVRPRQA*CQMADD
Trigger: ATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCT...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCAGGCGCTCAGTGGGTaGGGCAGTACGTGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: PMPESHLCVKSAPVRESAQALSG*GSTCLQ
Trigger: CTGAAGGCACGTACTGCCCAACCCACTGAGCGCCTG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTCACACCCTTCTGCCTTaGACACTTCCATCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPHTLLP*TLPSKR
Trigger: CCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTG...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACAGGTTGGTCTCCAACTaGTCTCTCAACACCCAGGAG +
Preference number: 3 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDRLVSN*SLNTQE
Trigger: CTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTTTGCCTCAGGTGACTaGAATGGGACTGCTGATGCC +
Preference number: 3 (lower is better)
Translates to: LTIGAFALMCPGAGETIPFASGD*NGTADA
Trigger: GGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAAA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 72 bp GAATGGCCTCAGGCGCTCAGTGGGTTGGGCAGTACGTaGCTTCAGTGTTTGGCCCCTGAGCAAAAAGATCGG +
Preference number: 3 (lower is better)
Translates to: EWPQALSGLGST*LQCLAPEQKDR
Trigger: CCGATCTTTTTGCTCAGGGGCCAAACACTGAAGGCACGTACTGCCCAACCCACTGAGCGCCTGAGGCCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GGAGGGTTGGCTGAGATGGGCTGGGCTGAAACAGTCTaGATATTCACAAAGACCCCAGGGTGCTGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: GGLAEMGWAETV*IFTKTPGCWAL
Trigger: CAGAGCCCAGCACCCTGGGGTCTTTGTGAATATCCAGACTGTTTCAGCCCAGCCCATCTCAGCCAACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTaGCATTGGGGTGGAGGTGGCCTGATGCTGAGAACC +
Preference number: 3 (lower is better)
Translates to: GRLHPYSRIHLS*HWGGGGLMLRT
Trigger: GGTTCTCAGCATCAGGCCACCTCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp CCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTaGGATTCCCAGCCTTCTGGGTGGAGAGGAATAGCC +
Preference number: 3 (lower is better)
Translates to: PVCEVGSCQGIS*DSQPSGWRGIA
Trigger: GGCTATTCCTCTCCACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp CCAAGGCCCACCGGTGCCGCGTGGCAAGGGGCTACGTaGAAGTTACCTCAGTACGATATCAAAGATCTGCGA +
Preference number: 3 (lower is better)
Translates to: PRPTGAAWQGAT*KLPQYDIKDLR
Trigger: TCGCAGATCTTTGATATCGTACTGAGGTAACTTCCACGTAGCCCCTTGCCACGCGGCACCGGTGGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTAGGCCACGACAGGCCTaGTGTCAGATGGCAGACGAT +
Preference number: 3 (lower is better)
Translates to: PMPESHLCVKSAPVRESARPRQA*CQMADD
Trigger: ATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTATTCCAGGAACGAAATaGCCTGGTTTTCCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPIPGTK*PGFPPP
Trigger: TGGAGGGGGAAAACCAGGCAATTTCGTTCCTGGAAT...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAATGCAGGAGGGGATATaGACCACGTGCACCCTGGAT +
Preference number: 3 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGMQEGI*TTCTLD
Trigger: ATCCAGGGTGCACGTGGTCAATATCCCCTCCTGCAT...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp ACACAGCGAGGACTTCTCACCCCTGTCAGGTGTGGCTaGTGGCTCAGACTTTGGGATAACTCTGAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: TQRGLLTPVRCG*WLRLWDNSEQD
Trigger: GTCCTGCTCAGAGTTATCCCAAAGTCTGAGCCACCAGCCACACCTGACAGGGGTGAGAAGTCCTCGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCCCCAGCCAGGGCTGTaGGGCTGGCCTGGATTCCAG +
Preference number: 3 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTPQPGL*GWPGFQ
Trigger: CTGGAATCCAGGCCAGCCCAACAGCCCTGGCTGGGG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAACCTGGATTCGCAGACTaGGGGCATCACCACTCCTGC +
Preference number: 3 (lower is better)
Translates to: HWRLVSNLSLNTQETYREPGFAD*GHHHSC
Trigger: GCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAGG...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTATGCAGGAGGGGATATaGACCACGTGCACCCTGGAT +
Preference number: 3 (lower is better)
Translates to: QERPVGERAIASGTGGHFMQEGI*TTCTLD
Trigger: ATCCAGGGTGCACGTGGTCAATATCCCCTCCTGCAT...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTACATCTATCCTGGCATaGGGGTGGAGGTGGCCTGAT +
Preference number: 3 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVTSILA*GWRWPD
Trigger: ATCAGGCCACCTCCACCCCAATGCCAGGATAGATGT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGACATCTATCCTGGCATaGGGGTGGAGGTGGCCTGAT +
Preference number: 3 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQTSILA*GWRWPD
Trigger: ATCAGGCCACCTCCACCCCAATGCCAGGATAGATGT...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTGGCATCTGGTTGACTTaGCCTGGTTACTCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: QERPVGERAIASGTGGHFGIWLT*PGYSQL
Trigger: GAGCTGGGAGTAACCAGGCAAAGTCAACCAGATGCC...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp CTGGACGAAGATGCAGACACTTTGCCTCAGGTGACTTaGATGGGACTGCTGATGCCTGTGGTCCCCAAGGGA +
Preference number: 3 (lower is better)
Translates to: LDEDADTLPQVT*MGLLMPVVPKG
Trigger: TCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAAAGTGTCTGCATCTTCGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp TCTGGCACAGGGGGTCACTTTTGCAGAGTCATCCACTaGCCATTGGAGCCTTTGCTCTTATGTGCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: SGTGGHFCRVIH*PLEPLLLCALG
Trigger: CCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAGTGGATGACTCTGCAAAAGTGACCCCCTGTGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 72 bp CTCTGTACACCAGTGGCTTCTGGTCTGGTGAATTATTaGGGAGGGCTGGGGGTCTGCAGACTTTTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: LCTPVASGLVNY*GGLGVCRLFLG
Trigger: ACCCAGGAAAAGTCTGCAGACCCCCAGCCCTCCGCAATAATTCACCAGACCAGAAGCCACTGGTGTACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp CTCACCCCTGTCAGGTGTGGCTGGTGGCTCAGACTTTaGGATAACTCTGAGCAGGACTATGGGTCTCAGCTT +
Preference number: 3 (lower is better)
Translates to: LTPVRCGWWLRL*DNSEQDYGSQL
Trigger: AAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCCAAAGTCTGAGCCACCAGCCACACCTGACAGGGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp CAGCGAGGACTTCTCACCCCTGTCAGGTGTGGCTGGTaGCTCAGACTTTGGGATAACTCTGAGCAGGACTAT +
Preference number: 3 (lower is better)
Translates to: QRGLLTPVRCGW*LRLWDNSEQDY
Trigger: ATAGTCCTGCTCAGAGTTATCCCAAAGTCTGAGCCACCAGCCACACCTGACAGGGGTGAGAAGTCCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp CTCCACCCCTACTCTAGAATACATCTATCCTGGCATTaGGGTGGAGGTGGCCTGATGCTGAGAACCTCTCCC +
Preference number: 3 (lower is better)
Translates to: LHPYSRIHLSWH*GGGGLMLRTSP
Trigger: GGGAGAGGTTCTCAGCATCAGGCCACCTCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp TCCACTGACCATTGGAGCCTTTGCTCTTATGTGCCCTaGGGCAGGGGAGACCATCCCCAAGTTACAAATAGC +
Preference number: 3 (lower is better)
Translates to: STDHWSLCSYVP*GRGDHPQVTNS
Trigger: GCTATTTGTAACTTGGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCAAACCTGAGATGCATTaGGCAGCAAATTGCAGAACA +
Preference number: 3 (lower is better)
Translates to: LTIGAFALMCPGAGETIPKPEMH*AANCRT
Trigger: TGTTCTGCAATTTGCTGCCAAATGCATCTCAGGTTT...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTTCCCAAGGAAAGGCTTaGATGCTGAAGGAAGCAGCA +
Preference number: 3 (lower is better)
Translates to: QERPVGERAIASGTGGHFSQGKA*MLKEAA
Trigger: TGCTGCTTCCTTCAGCATCAAAGCCTTTCCTTGGGA...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp AGTCCCCCAAAGATGCTGGCTGAAGGCAGCTATCACTaGAAGTTCCAGATGGACCTGGATGATGTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: SPPKMLAEGSYH*KFQMDLDDVCL
Trigger: CAGGCAGACATCATCCAGGTCCATCTGGAACTTTCAGTGATAGCTGCCTTCAGCCAGCATCTTTGGGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 72 bp CTAGGAGCCGAAAAGCAAAGGGTCGCTGGACGAAGATaGAGACACTTTGCCTCAGGTGACTTGAATGGGACT +
Preference number: 3 (lower is better)
Translates to: LGAEKQRVAGRR*RHFASGDLNGT
Trigger: AGTCCCATTCAAGTCACCTGAGGCAAAGTGTCTGCATCTTCGTCCAGCGACCCTTTGCTTTTCGGCTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCCCCAGCCAGGGCTGTaGGGCTGGCCTGGATTCCAG +
Preference number: 3 (lower is better)
Translates to: YLMENSILKSLVALGLEFPQPGL*GWPGFQ
Trigger: CTGGAATCCAGGCCAGCCCAACAGCCCTGGCTGGGG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCCTGGATTCGCAGACTaGGGGCATCACCACTCCTGC +
Preference number: 3 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTPGFAD*GHHHSC
Trigger: GCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAGG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCAGAGGAAAACATGATTaGGTTGATTCCAGGAACGAA +
Preference number: 3 (lower is better)
Translates to: SGDLNGTADACGPQGTETRGKHD*VDSRNE
Trigger: TTCGTTCCTGGAATCAACCAAATCATGTTTTCCTCT...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp CTCAGAACTCCCTACCTTGTAGCTAAGGTTGGCTCATaGGGGATTTCAGCGTCAGTCTGGGCTCATACTGTT +
Preference number: 3 (lower is better)
Translates to: LRTPYLVAKVGS*GISASVWAHTV
Trigger: AACAGTATGAGCCCAGACTGACGCTGAAATCCCTCATGAGCCAACCTTAGCTACAAGGTAGGGAGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp TCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCTaGCTCTGTCTTATTCCTCCTTTATCCGCAGAACCT +
Preference number: 3 (lower is better)
Translates to: SPRDGNHKEQFS*LCLIPPLSAEP
Trigger: AGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp ATGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTaGTGGCAAATGTTATCCAGGGGTGACCATGACAGC +
Preference number: 3 (lower is better)
Translates to: MSAWNPRSSIYT*WQMLSRGDHDS
Trigger: GCTGTCATGGTCACCCCTGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTAGAGGAAAACATGATTaGGTTGATTCCAGGAACGAA +
Preference number: 3 (lower is better)
Translates to: PMPESHLCVKSAPVRESARGKHD*VDSRNE
Trigger: TTCGTTCCTGGAATCAACCAAATCATGTTTTCCTCT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACACACCCTTCTGCCTTaGACACTTCCATCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: CLPGTQDPASILGGKCYPHTLLP*TLPSKR
Trigger: CCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp CAAGCTGCTATTATAGAGTCCCCCAAAGATGCTGGCTaGAGGCAGCTATCACTGAAAGTTCCAGATGGACCT +
Preference number: 3 (lower is better)
Translates to: QAAIIESPKDAG*RQLSLKVPDGP
Trigger: AGGTCCATCTGGAACTTTCAGTGATAGCTGCCTTCAGCCAGCATCTTTGGGGGACTCTATAATAGCAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GAATTAATGAATGACCGCGGCTCATTCATTGGAGGTTaGTCTCCAACTTGTCTCTCAACACCCAGGAGACCT +
Preference number: 3 (lower is better)
Translates to: ELMNDRGSFIGG*SPTCLSTPRRP
Trigger: AGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATGAATGAGCCGCGGTCATTCATTAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp ACTGAAAGTTCCAGATGGACCTGGATGATGTCTGCCTaGAACCCAAGATCCAGCATCTATACTTGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: TESSRWTWMMSA*NPRSSIYTWWQ
Trigger: TTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACATCATCCAGGTCCATCTGGAACTTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR GCA 72 bp CTGATCTCAAGCTGCTATTATAGAGTCCCCCAAAGATaGTGGCTGAAGGCAGCTATCACTGAAAGTTCCAGA +
Preference number: 3 (lower is better)
Translates to: LISSCYYRVPQR*WLKAAITESSR
Trigger: TCTGGAACTTTCAGTGATAGCTGCCTTCAGCCAGCATCTTTGGGGGACTCTATAATAGCAGCTTGAGATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CCA 72 bp GCCTTTGACACTTCCATCCAAGAGGAAAACATGATTTaGTTGATTCCAGGAACGAAATTGCCTGGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: AFDTSIQEENMI*LIPGTKLPGFP
Trigger: GGGAAAACCAGGCAATTTCGTTCCTGGAATCAACCAAATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAGAAAACATGATTTGGTaGATTCCAGGAACGAAATTG +
Preference number: 3 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPENMIW*IPGTKL
Trigger: CAATTTCGTTCCTGGAATCAACCAAATCATGTTTTC...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCTCATTCATTGGAGGTaGGTCTCCAACTTGTCTCTC +
Preference number: 3 (lower is better)
Translates to: YLMENSILKSLVALGLEFLIHWR*VSNLSL
Trigger: GAGAGACAAGTTGGAGACCAACCTCCAATGAATGAG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR TCA 72 bp ATTTGGCAGCAAATTGCAGAACAGTCTTCTAGACACTaGTCTCAAGCTGCTATTATAGAGTCCCCCAAAGAT +
Preference number: 3 (lower is better)
Translates to: IWQQIAEQSSRH*SQAAIIESPKD
Trigger: ATCTTTGGGGGACTCTATAATAGCAGCTTGAGATCAGTGTCTAGAAGACTGTTCTGCAATTTGCTGCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTATCCAGCATCTATACTaGGTGGCAAATGTTATCCAG +
Preference number: 3 (lower is better)
Translates to: YLMENSILKSLVALGLEFIQHLY*VANVIQ
Trigger: CTGGATAACATTTGCCACCAAGTATAGATGCTGGAT...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTGAAAACATGATTTGGTaGATTCCAGGAACGAAATTG +
Preference number: 3 (lower is better)
Translates to: YLMENSILKSLVALGLEFENMIW*IPGTKL
Trigger: CAATTTCGTTCCTGGAATCAACCAAATCATGTTTTC...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 72 bp CCTGGGTGTGCAGAGCCAGGCCCCGCACGGTGGCACTaGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PGCAEPGPARWH*QCPWEAGPLAN
Trigger: GTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGGCTCTGCACACCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCCCCTCCCCAACGCCCTaGCTGGGGGCTAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPPSPTP*LGASTV
Trigger: CACCGTGCTAGCCCCCAGCCAGGGCGTTGGGGAGGG...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGGTCAGCAGGTCCACGTaGCTGGCCATGGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRVSRST*LAMATA
Trigger: GGCGGTGGCCATGGCCAGTCACGTGGACCTGCTGAC...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGCATACTGGTAGGCACTaGCCGGAGCCCGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKHTGRH*PEPGGH
Trigger: ATGGCCTCCGGGCTCCGGTCAGTGCCTACCAGTATG...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGGCGGCCGCCCGTGCTaGGCTTCCGCTCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDGGRPC*ASAHAF
Trigger: GAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCTGCGGCGGCCGCCCGTaGTGCGCTTCCGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVCGGRP*CASAHA
Trigger: AGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCA...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGCAGCCACCAAGGGTaGAGTCACTCCCATGGGCCC +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKSSHQG*SHSHGP
Trigger: GGGCCCATGGGAGTGACTGCACCCTTGGTGGCTGCT...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTGGGGCCTCATGGTGTaGCCCGCTCTCCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPWGLMV*PALPSP
Trigger: AGGGCTCGGGAGAGCGGGCCACACCATGAGGCCCCA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGCGCGGGGCCTCTGGTaGGGCTGGGGCCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHARGLW*GWGLMV
Trigger: CACCATGAGGCCCCAGCCCCACCAGAGGCCCCGCGC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGGCAGGTCCACGTGACTaGCCATGGCCACCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRAGPRD*PWPPPS
Trigger: GGAGGGCGGTGGCCATGGCCAGTCACGTGGACCTGC...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCACGGCTGCCTGCGCTaGAGGTCCTCCGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDHGCLR*RSSGSR
Trigger: CCTTGAGCCGGAGGACCTCCAGCGCAGGCAGCCGTG...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTTGCTCCAGGGCGGGGTaGCGTCGGCCACGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGCSRAG*RRPRQG
Trigger: ACCCTGGCGTGGCCGACGCCACCCCGCCCTGGAGCA...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGTACTCTCGCCCGTCCTaGCCATGCTGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKYSRPS*PCCCPG
Trigger: ACCTGGGCAGCAGCATGGCCAGGACGGGCGAGAGTA...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCCCTGCAAGTGCAGGCTaGGAGCCCCTGGGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPPASAG*EPLGEA
Trigger: CGCCTCACCCAGGGGCTCCCAGCCTGCACTTGCAGG...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGGGCACAAGGCGGGGATaGTCTTCCAGTCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKGTRRG*SSSPKP
Trigger: GGGCTTGGGACTGGAAGACCATCCCCGCCTTGTGCC...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCGTCAGCAGGTCCACGTaGCTGGCCATGGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVVSRST*LAMATA
Trigger: GGCGGTGGCCATGGCCAGTCACGTGGACCTGCTGAC...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGCTGGGAGCCCCTGGGTaGGGCGGGAACTCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRLGAPG*GGNSKG
Trigger: CCCTTTTGAGTTCCCGCCTCACCCAGGGGCTCCCAG...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTCGAAGGACACTTTCTTaGGGCGGCCGCCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPRRTLS*GGRPCC
Trigger: GCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCG...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCGCCCGTCCTGGCCATaGTGCTGCCCAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVRPSWP*CCPGVC
Trigger: GCACACACCTGGGCAGCAGCATGGCCAGGACGGGCG...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGTCTGGTCCAGCCAGCTaGCCTGCTCCTGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKSGPAS*PAPGKA
Trigger: TGCTTTCCCAGGAGCAGGGCAGCTGGCTGGACCAGA...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGACCCAAGGCCCACCGGTaGCGCGTGGCAAGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGPKAHR*RVARGY
Trigger: GTAGCCCCTTGCCACGCGGCACCGGTGGGCCTTGGG...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGACCCCGGCTGTGTCTGTaGGTCCCCGAGCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGPRLCL*VPEPQL
Trigger: CAGCTGCGGCTCGGGGACCCACAGACACAGCCGGGG...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCGGGGCTGGGGCCTCATaGTGTGGCCCGCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLGAGAS*CGPLSR
Trigger: TCGGGAGAGCGGGCCACACCATGAGGCCCCAGCCCC...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCCCCAACGCCCTGGCTaGGGGCTAGCACGGTGCACC +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLPQRPG*GLARCT
Trigger: GGTGCACCGTGCTAGCCCCCAGCCAGGGCGTTGGGG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGACGGGACGTGGGACATaGGATGCTATGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKTGRGT*DAMGSQ
Trigger: CTGGCTGCCCATAGCATCCCATGTCCCACGTCCCGT...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCCCCACCGGTGCCGCGTaGCAAGGGGCTACGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCPTGAA*QGATWK
Trigger: CTTCCACGTAGCCCCTTGCCACGCGGCACCGGTGGG...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCATACTGGTAGGCACTaGCCGGAGCCCGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDHTGRH*PEPGGH
Trigger: ATGGCCTCCGGGCTCCGGTCAGTGCCTACCAGTATG...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGATCCCCGAGCCGCAGCTaGTCCAGCGGCGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGSPSRS*SSGDRA
Trigger: AGCTCTGTCGCCGCTGGAGCAGCTGCGGCTCGGGGA...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR GCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGATGTCCGCAATCATCTaGTGCTCAGGAGCCACCCGC +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKMSAII*CSGATR
Trigger: GCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACAT...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGGGCCCGCTGCGATCATaGAGTGGATGTCCGCAATCA +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKGPLRS*SGCPQS
Trigger: TGATTGCGGACATCCACTGCATGATCGCAGCGGGCC...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTCTTCCCACGGCTGCCTaGGCTGGAGGTCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGLPTAA*AGGPPA
Trigger: AGCCGGAGGACCTCCAGCGCAGGCAGCCGTGGGAAG...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGTCAGCTGCACTCCGCTaGCACAGGATGGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRSAALR*HRMASP
Trigger: GGGAGAGGCCATCCTGTGGCAGCGGAGTGCAGCTGA...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGGGGCCTTGCCTTCACTaGTACTCTCGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRGPCLH*YSRPSW
Trigger: CCAGGACGGGCGAGAGTAGCAGTGAAGGCAAGGCCC...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTCCACCTCTCCCCAGCTaGCCTGACACCTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGPPLPS*PDTSPA
Trigger: GGCTGGGGAGGTGTCAGGGCAGCTGGGGAGAGGTGG...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCCCTCCCCAACGCCCTaGCTGGGGGCTAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFPSPTP*LGASTV
Trigger: CACCGTGCTAGCCCCCAGCCAGGGCGTTGGGGAGGG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAGCAGGTCCACGTGACTaGCCATGGCCACCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGAGPRD*PWPPPS
Trigger: GGAGGGCGGTGGCCATGGCCAGTCACGTGGACCTGC...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCCACGGCTGCCTGCGCTaGAGGTCCTCCGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETHGCLR*RSSGSR
Trigger: CCTTGAGCCGGAGGACCTCCAGCGCAGGCAGCCGTG...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGGCACAAGGCGGGGATaGTCTTCCAGTCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDGTRRG*SSSPKP
Trigger: GGGCTTGGGACTGGAAGACCATCCCCGCCTTGTGCC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGCCTCAGGCGCTCAGTaGGTTGGGCAGTACGTGCCT +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDASGAQ*VGQYVP
Trigger: AGGCACGTACTGCCCAACCCACTGAGCGCCTGAGGC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTCCCACCGGTGCCGCGTaGCAAGGGGCTACGTGGAAG +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGPTGAA*QGATWK
Trigger: CTTCCACGTAGCCCCTTGCCACGCGGCACCGGTGGG...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTTCCCACGGCTGCCTaGGCTGGAGGTCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVLPTAA*AGGPPA
Trigger: AGCCGGAGGACCTCCAGCGCAGGCAGCCGTGGGAAG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCTCAGCTGCACTCCGCTaGCACAGGATGGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCSAALR*HRMASP
Trigger: GGGAGAGGCCATCCTGTGGCAGCGGAGTGCAGCTGA...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCTTGGCTGCAGCCCGCTaGCGCTTCAGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVLAAAR*RFSSRS
Trigger: GCTTCTGGAGCTGAAGCGGCAGCGGGCTGCAGCCAA...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCGCCCGTCCTGGCCATaGTGCTGCCCAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQRPSWP*CCPGVC
Trigger: GCACACACCTGGGCAGCAGCATGGCCAGGACGGGCG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGCCTTTGCTCTTATGTaGCCTGGGGCAGGGGAGACC +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPAFALM*PGAGET
Trigger: GGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCCGCACGGTGGCACTTaGAATGCCCATGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDPHGGT*NAHGKQ
Trigger: CTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGG...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCCACGTGACTGGCCATaGCCACCGCCCTCCCCAACG +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAPRDWP*PPPSPT
Trigger: CGTTGGGGAGGGCGGTGGCCATGGCCAGTCACGTGG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGTTGTCGATGCAGCACTaGTGTAGGGCTGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKLSMQH*CRAVSP
Trigger: CGGACTCACAGCCCTACACCAGTGCTGCATCGACAA...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGATCCAGTCCAGGTCCTaGCCCGCTGCGATCATGCAG +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRIQSRS*PAAIMQ
Trigger: CTGCATGATCGCAGCGGGCCAGGACCTGGACTGGAT...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCCCAGCCAGGGCTGTTaGGCTGGCCTGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLPSQGC*AGLDSR
Trigger: CCTGGAATCCAGGCCAGCCCAACAGCCCTGGCTGGG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGTGTCAGGGAATCAGCTaGGATTCCCAGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKCQGIS*DSQPSG
Trigger: CCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACA...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTCACTTGCAATGCCCATaGGAAGCAGGCCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPHLQCP*EAGPLA
Trigger: GGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTG...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCCAGGCCCCGCACGGTaGCACTTGCAATGCCCATGG +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLPGPAR*HLQCPW
Trigger: CCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGGGGATCTCCGCTGGTaGCCGTGTAATATACCGAGG +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPGDLRW*PCNIPR
Trigger: CCTCGGTATATTACACGGTCACCAGCGGAGATCCCC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCTGGGAGCCCCTGGGTaGGGCGGGAACTCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFLGAPG*GGNSKG
Trigger: CCCTTTTGAGTTCCCGCCTCACCCAGGGGCTCCCAG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTTGGGGGCTAGCACGGTaGACCGGGGGCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIWGLAR*TGGQGS
Trigger: GCTGCCCTGGCCCCCGGTGCACCGTGCTAGCCCCCA...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCGAAGGACACTTTCTTaGGGCGGCCGCCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQRRTLS*GGRPCC
Trigger: GCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCAGGAGGAGCTCAGCTaGCCGCAGGTATCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVQEELS*PQVSIG
Trigger: GCCAATGGATACCTGCGGGCAGCTGAGCTCCTCCTG...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR GCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGACAGAAGGCAGCTGCATaGAGGGGCTCCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGQKAAA*RGSQPS
Trigger: GGATGGCTGGGAGCCCCTGCATGCAGCTGCCTTCTG...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR GCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACCCACCTTCCCACGGCTaGCTGCGCTGGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENPPSHG*LRWRSS
Trigger: GGAGGACCTCCAGCGCAGGCAGCCGTGGGAAGGTGG...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCCGGCCACGCCAGGGTTaGCATAGGCCATGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCRPRQG*HRPCCS
Trigger: ACTACAGCATGGCCTATGGCAACCCTGGCGTGGCCG...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCTCTGTTCCTTGTAGCTaGTCCAGGGCGGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVSVPCS*SRAGWR
Trigger: ACGCCACCCCGCCCTGGAGCAGCTACAAGGAACAGA...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGTTGGCTGCAGCCCGCTaGCGCTTCAGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGLAAAR*RFSSRS
Trigger: GCTTCTGGAGCTGAAGCGGCAGCGGGCTGCAGCCAA...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGCTGAGCAGCTTGGCTaGAGCCCGCTGCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAAEQLG*SPLPLQ
Trigger: CTGAAGCGGCAGCGGGCTGCAGCCAAGCTGCTCAGC...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGGGCCTTGCCTTCACTaGTACTCTCGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHGPCLH*YSRPSW
Trigger: CCAGGACGGGCGAGAGTAGCAGTGAAGGCAAGGCCC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTGTGGGCAGTGCCCATaGCATGGGCATCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPCGQCP*HGHLQR
Trigger: CCTTTGGAGATGCCCATGGCATGGGCACTGCCCACA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGGAGCCATGCAGCACCTaGTTTGGAAGTGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKEPCST*FGSGLL
Trigger: AAGGAGACCACTTCCAAAGCAGGTGCTGCATGGCTC...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGACTTTTCCTGGGTGTaGAGAGCCAGGCCCCGCACG +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHDFSWV*RARPRT
Trigger: CGTGCGGGGCCTGGCTCTGCACACCCAGGAAAAGTC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGGGTCTGGTGAATTATTaGGGAGGGCTGGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRGLVNY*GGLGVC
Trigger: GCAGACCCCCAGCCCTCCGCAATAATTCACCAGACC...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAACCCAAGGCCCACCGGTaGCGCGTGGCAAGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREPKAHR*RVARGY
Trigger: GTAGCCCCTTGCCACGCGGCACCGGTGGGCCTTGGG...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACTGGGGCCTCATGGTGTaGCCCGCTCTCCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENWGLMV*PALPSP
Trigger: AGGGCTCGGGAGAGCGGGCCACACCATGAGGCCCCA...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTGGGGCTGGGGCCTCATaGTGTGGCCCGCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTGAGAS*CGPLSR
Trigger: TCGGGAGAGCGGGCCACACCATGAGGCCCCAGCCCC...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCCCAGCAGGGCCACGCTaGCCTCGAAGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCPAGPR*PRRTLS
Trigger: AGAAAGTGTCCTTCGAGGCCAGCGTGGCCCTGCTGG...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTTCCTGTCCGACAGGCTaGCTCGCCGCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESASCPTG*LAAPPS
Trigger: GGAAGGTGGTGCGGCGAGCCAGCCTGTCGGACAGGA...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTGTCCCCGTTGTAGGTaGAGGTCCGCTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPCPRCR*RSADPQ
Trigger: CTGAGGATCAGCGGACCTCCACCTACAACGGGGACA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACTCCAGACATCCCCGTTaGCCAGCGCATACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDSRHPR*PAHTGR
Trigger: CCTACCAGTATGCGCTGGCCAACGGGGATGTCTGGA...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTGTGCTAAGGAAGGGGTaGCTGAGCAGCTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPVLRKG*LSSLAA
Trigger: TGCAGCCAAGCTGCTCAGCCACCCCTTCCTTAGCAC...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCCCAGCCAGGGCTGTTaGGCTGGCCTGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFPSQGC*AGLDSR
Trigger: CCTGGAATCCAGGCCAGCCCAACAGCCCTGGCTGGG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCACGGGACGTGGGACATaGGATGCTATGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCTGRGT*DAMGSQ
Trigger: CTGGCTGCCCATAGCATCCCATGTCCCACGTCCCGT...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTGGGCCCTCTACTTTCTaGTCCAGCCAGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGGPSTF*SSQLPC
Trigger: GCAGGGCAGCTGGCTGGACCAGAAAGTAGAGGGCCC...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGCTGGTTGACTTTGCCTaGTTACTCCCAGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKLVDFA*LLPAPE
Trigger: TTCGGGAGCTGGGAGTAACCAGGCAAAGTCAACCAG...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTTCTGCAGACTTTTCCTaGGTGTGCAGAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPSADFS*VCRARP
Trigger: GGGCCTGGCTCTGCACACCCAGGAAAAGTCTGCAGA...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGACATGTGCCCCCTTTaGGATGTGGCTGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDDMCPL*DVAEPQ
Trigger: CTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 72 bp GGGGATATTGACCACGTGCACCCTGGATTCGCAGACTaGGGGCATCACCACTCCTGCAAGTGCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GDIDHVHPGFAD*GHHHSCKCRLG
Trigger: TCCCAGCCTGCACTTGCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAGGGTGCACGTGGTCAATATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCGGATCTTCACCAGGTTaGTGTGGCCGCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETGSSPG*CGRRWL
Trigger: CAGCCACCTGCGGCCACATCAACCTGGTGAAGATCC...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTAAGTCGGCCCCATACTaGACGAGGATCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPKSAPY*TRIFTR
Trigger: CCTGGTGAAGATCCTCGTTCAGTATGGGGCCGACTT...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACAAGTCGGCCCCATACTaGACGAGGATCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDKSAPY*TRIFTR
Trigger: CCTGGTGAAGATCCTCGTTCAGTATGGGGCCGACTT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCTGTTCCCATCCGAGTTaGCAGCAAGCAAGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCCSHPS*QQASRP
Trigger: GGGCCGACTTGCTTGCTGTCAACTCGGATGGGAACA...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGACTGTCCTGGTCTCCCTaGTGTCCCCGTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGLSWSP*CPRCRW
Trigger: CCACCTACAACGGGGACATCAGGGAGACCAGGACAG...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTATTCCTGGCTCCCTCTaGACACAGCGAGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPIPGSL*TQRGLL
Trigger: GAGAAGTCCTCGCTGTGTTCAGAGGGAGCCAGGAAT...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTTGGGAGACTCAGCAGTaGGGGGAGAACAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPWETQQ*GENSHS
Trigger: TGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCA...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCCCAGATGGACCTGGATaGTGTCTGCCTGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPPDGPG*CLPGTQ
Trigger: TTGGGTTCCAGGCAGACATCATCCAGGTCCATCTGG...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGCTGCGCTTCCGCTCATaGTTTCGCTTGCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGLRFRS*FRLRCC
Trigger: GCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAG...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGGTGATGCCCTGGTATaGCATGCAGGTCTCGATGAC +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDGDALV*HAGLDD
Trigger: GTCATCGAGACCTGCATGGCATACCAGGGCATCACC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGCAGGTCCTGGCCCGCTaGGATCATGCAGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGQVLAR*DHAVDV
Trigger: GACATCCACTGCATGATCGCAGCGGGCCAGGACCTG...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAACCACCTCTCCCCAGCTaGCCTGACACCTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREPPLPS*PDTSPA
Trigger: GGCTGGGGAGGTGTCAGGGCAGCTGGGGAGAGGTGG...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCAAGACCCCAGGGTGCTaGGCTCTGTCGCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPKTPGC*ALSLLT
Trigger: AGTTAACAGCGACAGAGCCCAGCACCCTGGGGTCTT...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCAGGCTGGGAGCCCCTaGGTGAGGCGGGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFQAGSP*VRRELK
Trigger: TTTGAGTTCCCGCCTCACCCAGGGGCTCCCAGCCTG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGTCCAGCTCCCTCTCTaGGTTATGGGGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHVQLPL*VMGLWG
Trigger: CCCCCATAGCCCCATAACCCAGAGAGGGAGCTGGAC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGCCCTCTACTTTCTaGTCCAGCCAGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAGPSTF*SSQLPC
Trigger: GCAGGGCAGCTGGCTGGACCAGAAAGTAGAGGGCCC...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGTGCAGTCACTCCCATaGGCCCTCTACTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPVQSLP*ALYFLV
Trigger: GACCAGAAAGTAGAGGGCCCATGGGAGTGACTGCAC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGCCTCAGGCGCTCAGTaGGTTGGGCAGTACGTGCCT +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQASGAQ*VGQYVP
Trigger: AGGCACGTACTGCCCAACCCACTGAGCGCCTGAGGC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCGGAAAAGGAGGGAATaGCCTCAGGCGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHRKRRE*PQALSG
Trigger: CCCACTGAGCGCCTGAGGCCATTCCCTCCTTTTCCG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGTGGATGATGTCTGCCTaGAACCCAAGATCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKWMMSA*NPRSSI
Trigger: GATGCTGGATCTTGGGTTCCAGGCAGACATCATCCA...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGAATCCACCCCTGCCATaGAGGGAGGCAGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRNPPLP*READSQ
Trigger: TTGGGAATCTGCCTCCCTCCATGGCAGGGGTGGATT...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCTGCTCTTATGTGCCCTaGGGCAGGGGAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETCSYVP*GRGDHP
Trigger: GGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCA...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGACACTTGCAATGCCCATaGGAAGCAGGCCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGHLQCP*EAGPLA
Trigger: GGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTG...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACCCAGGCCCCGCACGGTaGCACTTGCAATGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENPGPAR*HLQCPW
Trigger: CCATGGGCATTGCAAGTGCCACCGTGCGGGGCCTGG...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTGCTGAGCCACAGTTTTaGACCCAAGGCCCACCGGTG +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGAEPQF*TQGPPV
Trigger: CACCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGC...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGCCCCCTTTGGGATGTaGCTGAGCCACAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDAPFGM*LSHSFG
Trigger: TCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGACAGGCCTTGGCAGCTaGAAGCAACTCCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRTGLGS*KQLQGH
Trigger: ATGTCCCTGGAGTTGCTTCCAGCTGCCAAGGCCTGT...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACATCAGTGTGGCACCCTaGGCATCTATCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDISVAP*ASIQSR
Trigger: CCTGGACTGGATAGATGCCCAGGGTGCCACACTGAT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373331.2
CDS-3UTR TCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTGTCCTGGTCTCCCTaGTGTCCCCGTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVLSWSP*CPRCRW
Trigger: CCACCTACAACGGGGACATCAGGGAGACCAGGACAG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTCTACCATGGCTCTCCTaGATGCAGGAGGGGATATTG +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPLPWLS*MQEGIL
Trigger: CAATATCCCCTCCTGCATTCAGGAGAGCCATGGTAG...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGGGAAGGCTGGGACTATaGAACTGCAGGGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGGRLGL*NCRAGQ
Trigger: TTGCCCAGCCCTGCAGTTTCATAGTCCCAGCCTTCC...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCATCACTCAGGCTCCCTaGAGTCCAGCTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETITQAP*SPAPSL
Trigger: CAGAGAGGGAGCTGGACTTCAGGGAGCCTGAGTGAT...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCACAGCCTGAGATGTTaGAGAGCCCACCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVHSLRC*RAHPKW
Trigger: CCATTTGGGGTGGGCTCTTCAACATCTCAGGCTGTG...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTTGCCTCAGGTGACTTaGATGGGACTGCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPLPQVT*MGLLMP
Trigger: AGGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACTGCAGAGTCATCCACTaGCCATTGGAGCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDCRVIH*PLEPLL
Trigger: GAGCAAAGGCTCCAATGGTCAGTGGATGACTCTGCA...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACGCCCATTTCTTCAGCTaGTGGGCCCGGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENAHFFS*WARRFW
Trigger: CCAGAAGCGCCGGGCCCAGCAGCTGAAGAAATGGGC...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGTCCTGCTCGTACTGTaGCCATTTCTTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPVLLVL*PFLQLL
Trigger: CAGCAGCTGAAGAAATGGGCACAGTACGAGCAGGAC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTGCGCTTCCGCTCATaGTTTCGCTTGCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVLRFRS*FRLRCC
Trigger: GCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCCTCAAAGTTGTCGATaGAGCACTGGTGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDPQSCR*STGVGL
Trigger: CAGCCCTACACCAGTGCTGCATCGACAACTTTGAGG...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTATGTCCGCAATCATCTaGTGCTCAGGAGCCACCCGC +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGMSAII*CSGATR
Trigger: GCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACAT...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCGGCCCGCTGCGATCATaGAGTGGATGTCCGCAATCA +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETGPLRS*SGCPQS
Trigger: TGATTGCGGACATCCACTGCATGATCGCAGCGGGCC...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGTTGGCTCCAGCTATGTaGAGCAGTGTGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGLAPAM*SSVAPW
Trigger: CCAGGGTGCCACACTGCTGCACATAGCTGGAGCCAA...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR GCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGGGTTGCCATAGGCCATaGTGTAGTCAGGCACCTCAT +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRGCHRP*CSQAPH
Trigger: ATGAGGTGCCTGACTACAGCATGGCCTATGGCAACC...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTGCTGAGCAGCTTGGCTaGAGCCCGCTGCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTAEQLG*SPLPLQ
Trigger: CTGAAGCGGCAGCGGGCTGCAGCCAAGCTGCTCAGC...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTCGATCAAGGGGGCCTTaGCTTCACTGCTACTCTCGC +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGRSRGP*LHCYSR
Trigger: GCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCG...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAACACCACTCCTGCAAGTaGAGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREHHSCK*RLGAPG
Trigger: CCCAGGGGCTCCCAGCCTGCACTTGCAGGAGTGGTG...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGGGATATTGACCACGTaGACCCTGGATTCGCAGACT +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPGILTT*TLDSQT
Trigger: AGTCTGCGAATCCAGGGTGCACGTGGTCAATATCCC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCAGAGTCCCCCAAAGATaGTGGCTGAAGGCAGCTATC +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPRVPQR*WLKAAI
Trigger: GATAGCTGCCTTCAGCCAGCATCTTTGGGGGACTCT...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTGAGCCATGCAGCACCTaGTTTGGAAGTGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPEPCST*FGSGLL
Trigger: AAGGAGACCACTTCCAAAGCAGGTGCTGCATGGCTC...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCCGCACGGTGGCACTTaGAATGCCCATGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAPHGGT*NAHGKQ
Trigger: CTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTGGTCTGGTGAATTATTaGGGAGGGCTGGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGGLVNY*GGLGVC
Trigger: GCAGACCCCCAGCCCTCCGCAATAATTCACCAGACC...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGGGTCCTTATTCTCTTaGTCTGTCCTGGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDGSLFS*SVLVSL
Trigger: CAGGGAGACCAGGACAGACCAAGAGAATAAGGACCC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCACCCCTGTCAGGTGTaGCTGGTGGCTCAGACTTTG +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHHPCQV*LVAQTL
Trigger: CAAAGTCTGAGCCACCAGCCACACCTGACAGGGGTG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCAAAAAGGCAAAAGCTaGGCCCGGGATCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLQKGKS*ARDPEH
Trigger: GTGCTCGGGATCCCGGGCCCAGCTTTTGCCTTTTTG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTATGAAACTGCAGGGCTaGGCAAGACCCAACTCTAGC +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPMKLQG*ARPNSS
Trigger: GCTAGAGTTGGGTCTTGCCCAGCCCTGCAGTTTCAT...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGCCGCGGCTCATTCATTaGAGGTTGGTCTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRPRLIH*RLVSNL
Trigger: CAAGTTGGAGACCAACCTCCAATGAATGAGCCGCGG...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAAAGCAAAGGGTCGCTaGACGAAGATGCAGACACTT +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKKAKGR*TKMQTL
Trigger: AAGTGTCTGCATCTTCGTCCAGCGACCCTTTGCTTT...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCAATCCACCCCTGCCATaGAGGGAGGCAGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVNPPLP*READSQ
Trigger: TTGGGAATCTGCCTCCCTCCATGGCAGGGGTGGATT...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGTACACCAGTGGCTTCTaGTCTGGTGAATTATTGCGG +
Preference number: 4 (lower is better)
Translates to: PARWHLQCPWEAGPLANKYTSGF*SGELLR
Trigger: CCGCAATAATTCACCAGACCAGAAGCCACTGGTGTA...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCGACATGTGCCCCCTTTaGGATGTGGCTGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLDMCPL*DVAEPQ
Trigger: CTGTGGCTCAGCCACATCCCAAAGGGGGCACATGTC...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTTGTTCCCATCCGAGTTaGCAGCAAGCAAGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFCSHPS*QQASRP
Trigger: GGGCCGACTTGCTTGCTGTCAACTCGGATGGGAACA...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCCAGCAGCAGGACCTTaGACTCTTCCTCCTCGCACA +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQPAAGP*TLPPRT
Trigger: TGTGCGAGGAGGAAGAGTTCAAGGTCCTGCTGCTGG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCCCTCTATGGGGGCCTTaGACTTTAAGAGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCPLWGP*TLRVGD
Trigger: ATCCCCCACTCTTAAAGTTCAAGGCCCCCATAGAGG...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCTGAGGGCTGGGGTCTaGGTTCCTCTGAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLLRAGV*VPLKSR
Trigger: TCTGCTTTTCAGAGGAACTCAGACCCCAGCCCTCAG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCACTTTGGTAAATACTaGCCTTGTCCCCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDHFGKY*PCPPPT
Trigger: TGTGGGAGGGGGACAAGGTCAGTATTTACCAAAGTG...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTGGAACTCAAAAGGGCTaGCTGGCAAATCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPGTQKG*LANLSH
Trigger: GTGAGACAGATTTGCCAGTCAGCCCTTTTGAGTTCC...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCTTGAATGGGACTGCTaGTGCCTGTGGTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFLEWDC*CLWSPR
Trigger: CCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACCCCAAAGATGCTGGCTaGAGGCAGCTATCACTGAAA +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDPKDAG*RQLSLK
Trigger: TTTCAGTGATAGCTGCCTTCAGCCAGCATCTTTGGG...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCCCCAAAGATGCTGGCTaGAGGCAGCTATCACTGAAA +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPPKDAG*RQLSLK
Trigger: TTTCAGTGATAGCTGCCTTCAGCCAGCATCTTTGGG...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGGGATGGGAAGGTATCTaGCACCAACAACCACAATGG +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRGWEGI*HQQPQW
Trigger: CCATTGTGGTTGTTGGTGTCAGATACCTTCCCATCC...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGATGGCTTCTGGTCTGGTaGATTATTGCGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGWLLVW*IIAEGW
Trigger: CCAGCCCTCCGCAATAATTCACCAGACCAGAAGCCA...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCCCTTTGGGATGTGGCTaGGCCACAGTTTTGGACCCA +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETPLGCG*ATVLDP
Trigger: TGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGG...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGACGGTGCTGCAAGTCCTaGTCGTACTGTGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGRCCKS*SYCAHF
Trigger: GAAATGGGCACAGTACGAGCAGGACTTGCAGCACCG...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGATGCTTTCGCTTGCGGTaGTGCAAGTCCTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGCFRLR*CKSCSY
Trigger: GTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCA...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCGATCAAGGGGGCCTTaGCTTCACTGCTACTCTCGC +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFRSRGP*LHCYSR
Trigger: GCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGTGTACGGTGAAGTTCTaGCTCCGATCAAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGCTVKF*LRSRGP
Trigger: AGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACA...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTGTACGGTGAAGTTCTaGCTCCGATCAAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHCTVKF*LRSRGP
Trigger: AGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACA...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAACAAAGACCCCAGGGTaGTGGGCTCTGTCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGTKTPG*WALSLL
Trigger: TAACAGCGACAGAGCCCAGCACCCTGGGGTCTTTGT...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACTCTGGTCCAGCCAGCTaGCCTGCTCCTGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENSGPAS*PAPGKA
Trigger: TGCTTTCCCAGGAGCAGGGCAGCTGGCTGGACCAGA...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGGTTGGGCAGTACGTaGCTTCAGTGTTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQGLGST*LQCLAP
Trigger: AGGGGCCAAACACTGAAGGCACGTACTGCCCAACCC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCAGTACCCCAGTATCCTaGTCTAGGAGAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCSTPVS*SRRESR
Trigger: CCTGCTCTCTCTCCTAGAGCAGGATACTGGGGTACT...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACCGGTGGCACTTGCAATaGCCATGGGAAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENRWHLQ*PWEAGP
Trigger: AGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGAACTCCAGGGACATGTaGCCCCTTTGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGNSRDM*PLWDVA
Trigger: AGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTT...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCCCCAACGCCCTGGCTaGGGGCTAGCACGGTGCACC +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTPQRPG*GLARCT
Trigger: GGTGCACCGTGCTAGCCCCCAGCCAGGGCGTTGGGG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTAGCAGTGTGGCACCCTaGGCATCTATCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVSSVAP*ASIQSR
Trigger: CCTGGACTGGATAGATGCCCAGGGTGCCACACTGCT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTTCCTGTCCGACAGGCTaGCTCGCCGCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMISCPTG*LAAPPS
Trigger: GGAAGGTGGTGCGGCGAGCCAGCCTGTCGGACAGGA...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGCCTTCCTATACAGGTTaGTCCTGTCCGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGPSYTG*SCPTGW
Trigger: CCAGCCTGTCGGACAGGACCAACCTGTATAGGAAGG...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAATACTCTCGCCCGTCCTaGCCATGCTGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREYSRPS*PCCCPG
Trigger: ACCTGGGCAGCAGCATGGCCAGGACGGGCGAGAGTA...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCAGAACCACGGGACGTaGGACATGGGATGCTATGGG +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAQNHGT*DMGCYG
Trigger: CCCATAGCATCCCATGTCCCACGTCCCGTGGTTCTG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCAGGCCTTGTGTCAGATaGCAGACGATGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCRPCVR*QTMQQE
Trigger: TTCCTGCTGCATCGTCTGCCATCTGACACAAGGCCT...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCACCCCTGTCAGGTGTaGCTGGTGGCTCAGACTTTG +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFHPCQV*LVAQTL
Trigger: CAAAGTCTGAGCCACCAGCCACACCTGACAGGGGTG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGCATGGGCAGAAGTGTaGCTCTCAACAAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQAWAEV*LSTRLR
Trigger: CCGCAGCCTTGTTGAGAGCCACACTTCTGCCCATGC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTCCCTCCACCCCTGGATaGTCACACAGCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTPSTPG*SHSWLL
Trigger: CAGGAGCCAGCTGTGTGACCATCCAGGGGTGGAGGG...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTCTGGATTCGCAGACTTaGGGCATCACCACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGLDSQT*GITTPA
Trigger: TGCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAG...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCAGCACCAGGAAGGCTaGGACTATGAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHQHQEG*DYETAG
Trigger: CCCTGCAGTTTCATAGTCCCAGCCTTCCTGGTGCTG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGTGCAGTCACTCCCATaGGCCCTCTACTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHVQSLP*ALYFLV
Trigger: GACCAGAAAGTAGAGGGCCCATGGGAGTGACTGCAC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTCATCTATCCTGGCATTaGGGTGGAGGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGHLSWH*GGGGLM
Trigger: CATCAGGCCACCTCCACCCCAATGCCAGGATAGATG...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTAGGCGCTCAGTGGGTTaGGCAGTACGTGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESARRSVG*AVRAFS
Trigger: ACTGAAGGCACGTACTGCCCAACCCACTGAGCGCCT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTAGCTGCCATAGGACCTaGGTCTCAGCAGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFSCHRT*VSAGAR
Trigger: CCTAGCTCCTGCTGAGACCCAGGTCCTATGGCAGCT...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGTCTGCAGACTTTTCCTaGGTGTGCAGAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQSADFS*VCRARP
Trigger: GGGCCTGGCTCTGCACACCCAGGAAAAGTCTGCAGA...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACTGGCAAGGGGCTACGTaGAAGTTACCTCAGTACGAT +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDWQGAT*KLPQYD
Trigger: ATCGTACTGAGGTAACTTCCACGTAGCCCCTTGCCA...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACGCTGAGCCACAGTTTTaGACCCAAGGCCCACCGGTG +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENAEPQF*TQGPPV
Trigger: CACCGGTGGGCCTTGGGTCCAAAACTGTGGCTCAGC...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTGCCCCCTTTGGGATGTaGCTGAGCCACAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGAPFGM*LSHSFG
Trigger: TCCAAAACTGTGGCTCAGCCACATCCCAAAGGGGGC...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 72 bp GCTGGACGAAGATGCAGACACTTTGCCTCAGGTGACTaGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: AGRRCRHFASGD*NGTADACGPQG
Trigger: CCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAAAGTGTCTGCATCTTCGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCCATGCAGGTCTCGATaGCATCCAGGGTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAPCRSR*HPGWVH
Trigger: ATGAACCCACCCTGGATGTCATCGAGACCTGCATGG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACCCAGCAGCAGGACCTTaGACTCTTCCTCCTCGCACA +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENPAAGP*TLPPRT
Trigger: TGTGCGAGGAGGAAGAGTTCAAGGTCCTGCTGCTGG...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACGGGGATCTCCGCTGGTaGCCGTGTAATATACCGAGG +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENGDLRW*PCNIPR
Trigger: CCTCGGTATATTACACGGTCACCAGCGGAGATCCCC...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTGGGTCTGAGTTCCTCTaGAAAGCAGAGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFGSEFL*KAEPTS
Trigger: AGAGGTGGGCTCTGCTTTTCAGAGGAACTCAGACCC...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCTGAGGGCTGGGGTCTaGGTTCCTCTGAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQLRAGV*VPLKSR
Trigger: TCTGCTTTTCAGAGGAACTCAGACCCCAGCCCTCAG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTTGCAGGAGGGGATATTaGCCACGTGCACCCTGGATT +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVCRRGY*PRAPWI
Trigger: AATCCAGGGTGCACGTGGTCAATATCCCCTCCTGCA...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCTGCAGAGTCATCCACTaGCCATTGGAGCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETCRVIH*PLEPLL
Trigger: GAGCAAAGGCTCCAATGGTCAGTGGATGACTCTGCA...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAGTCCTGCTCGTACTGTaGCCATTTCTTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGVLLVL*PFLQLL
Trigger: CAGCAGCTGAAGAAATGGGCACAGTACGAGCAGGAC...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGTTTCGCTTGCGGTGCTaGAAGTCCTGCTCGTACTGT +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGFRLRC*KSCSYC
Trigger: ACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAA...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACCACCTTCCCACGGCTaGCTGCGCTGGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPPPSHG*LRWRSS
Trigger: GGAGGACCTCCAGCGCAGGCAGCCGTGGGAAGGTGG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTCCGCTGATCCTCAGCTaGACTCCGCTGCCACAGGAT +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTPLILS*TPLPQD
Trigger: ATCCTGTGGCAGCGGAGTGCAGCTGAGGATCAGCGG...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGGTTGCCATAGGCCATaGTGTAGTCAGGCACCTCAT +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHGCHRP*CSQAPH
Trigger: ATGAGGTGCCTGACTACAGCATGGCCTATGGCAACC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAATCTGTTCCTTGTAGCTaGTCCAGGGCGGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYRESVPCS*SRAGWR
Trigger: ACGCCACCCCGCCCTGGAGCAGCTACAAGGAACAGA...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCCGAGGTCCCATTGCTaGTGTACGGTGAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQPRSHC*CTVKFC
Trigger: GCAGAACTTCACCGTACAGCAGCAATGGGACCTCGG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTACAAAGACCCCAGGGTaGTGGGCTCTGTCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFTKTPG*WALSLL
Trigger: TAACAGCGACAGAGCCCAGCACCCTGGGGTCTTTGT...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTGGGATATTGACCACGTaGACCCTGGATTCGCAGACT +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGGILTT*TLDSQT
Trigger: AGTCTGCGAATCCAGGGTGCACGTGGTCAATATCCC...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTAGCAGCCACCAAGGGTaGAGTCACTCCCATGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMISSHQG*SHSHGP
Trigger: GGGCCCATGGGAGTGACTGCACCCTTGGTGGCTGCT...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTTATGATGGTGAGCCATaGAGCACCTGCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPYDGEP*STCFGS
Trigger: ACTTCCAAAGCAGGTGCTGCATGGCTCACCATCATA...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTGACCATTGGAGCCTTTaGTCTTATGTGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVDHWSL*SYVPWG
Trigger: GCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTC...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTAACTCCAGGGACATGTaGCCCCTTTGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESANSRDM*PLWDVA
Trigger: AGCCACATCCCAAAGGGGGCACATGTCCCTGGAGTT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACCACGTGACTGGCCATaGCCACCGCCCTCCCCAACG +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPPRDWP*PPPSPT
Trigger: CGTTGGGGAGGGCGGTGGCCATGGCCAGTCACGTGG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTTTGTCGATGCAGCACTaGTGTAGGGCTGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFLSMQH*CRAVSP
Trigger: CGGACTCACAGCCCTACACCAGTGCTGCATCGACAA...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCTTCACATTGGCACCATaGGAGAGGAGCAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVFTLAP*ERSSFT
Trigger: TGTGAAGCTGCTCCTCTCCCATGGTGCCAATGTGAA...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGTCTTGGGTGATGCCCTaGTATGCCATGCAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQSWVMP*YAMQVS
Trigger: CGAGACCTGCATGGCATACCAGGGCATCACCCAAGA...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCCCGCAGGTATCCATTaGCTCCAGCTATGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQPAGIH*LQLCAA
Trigger: TGCTGCACATAGCTGGAGCCAATGGATACCTGCGGG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGCTGAGACTAGCTCCATaGGACACCAATAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGLRLAP*DTNSSA
Trigger: GGCAGAGCTATTGGTGTCCCATGGAGCTAGTCTCAG...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCCTCGCACAGGTCTATTaGCATCTCATCCATGGATGT +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPLAQVY*HLIHGC
Trigger: ACATCCATGGATGAGATGCCAATAGACCTGTGCGAG...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACTGTCCCCGTTGTAGGTaGAGGTCCGCTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENCPRCR*RSADPQ
Trigger: CTGAGGATCAGCGGACCTCCACCTACAACGGGGACA...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAGGGTCCTTATTCTCTTaGTCTGTCCTGGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGGSLFS*SVLVSL
Trigger: CAGGGAGACCAGGACAGACCAAGAGAATAAGGACCC...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTGTCCAGTTCACCTCGTaGGATCTTGGTAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPVQFTS*DLGRKF
Trigger: GAATTTCCTACCAAGATCCCACGAGGTGAACTGGAC...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGAGGCCTTGTGTCAGATaGCAGACGATGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGRPCVR*QTMQQE
Trigger: TTCCTGCTGCATCGTCTGCCATCTGACACAAGGCCT...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCGTCAGGTGTGGCTGGTaGCTCAGACTTTGGGATAAC +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETVRCGW*LRLWDN
Trigger: GTTATCCCAAAGTCTGAGCCACCAGCCACACCTGAC...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCGTCAGGTGTGGCTGGTaGCTCAGACTTTGGGATAAC +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLVRCGW*LRLWDN
Trigger: GTTATCCCAAAGTCTGAGCCACCAGCCACACCTGAC...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACGGATGGTCACACAGCTaGCTCCTGGCATGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENGWSHS*LLAWAE
Trigger: TTCTGCCCATGCCAGGAGCCAGCTGTGTGACCATCC...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGAAGACCCCAGGGTGCTaGGCTCTGTCGCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQKTPGC*ALSLLT
Trigger: AGTTAACAGCGACAGAGCCCAGCACCCTGGGGTCTT...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACGAGGTGGAGGCAGGCTaGCCCCTAATTGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENEVEAG*PLIACS
Trigger: AGAGCAAGCAATTAGGGGCCAGCCTGCCTCCACCTC...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGCTCAAAAGGGCTGACTaGCAAATCTGTCTCACCAAG +
Preference number: 4 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRLKRAD*QICLTK
Trigger: CTTGGTGAGACAGATTTGCCAGTCAGCCCTTTTGAG...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCCTGCAAGTGCAGGCTaGGAGCCCCTGGGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTPASAG*EPLGEA
Trigger: CGCCTCACCCAGGGGCTCCCAGCCTGCACTTGCAGG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTGGATTCGCAGACTTaGGGCATCACCACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVLDSQT*GITTPA
Trigger: TGCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGCAAATGGCAAGGTCGTaGGAAGCATCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGQMARS*EASVHL
Trigger: CAGGTGCACAGATGCTTCCCACGACCTTGCCATTTG...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGATTATTGCGGAGGGCTaGGGGTCTGCAGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGIIAEG*GSADFS
Trigger: GGAAAAGTCTGCAGACCCCCAGCCCTCCGCAATAAT...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTACAGGCCTTGGCAGCTaGAAGCAACTCCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESATGLGS*KQLQGH
Trigger: ATGTCCCTGGAGTTGCTTCCAGCTGCCAAGGCCTGT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCCATCTGCATCAGTGTaGCACCCTGGGCATCTATCC +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVPSASV*HPGHLS
Trigger: GGATAGATGCCCAGGGTGCCACACTGATGCAGATGG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373331.2
3UTR CAA 72 bp TCTCTGTACACCAGTGGCTTCTGGTCTGGTGAATTATaGCGGAGGGCTGGGGGTCTGCAGACTTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLYTSGFWSGEL*RRAGGLQTFPG
Trigger: CCCAGGAAAAGTCTGCAGACCCCCAGCCCTCCGCAATAATTCACCAGACCAGAAGCCACTGGTGTACAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCCTCTATGGGGGCCTTaGACTTTAAGAGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQPLWGP*TLRVGD
Trigger: ATCCCCCACTCTTAAAGTTCAAGGCCCCCATAGAGG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGGAACTCAAAAGGGCTaGCTGGCAAATCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHGTQKG*LANLSH
Trigger: GTGAGACAGATTTGCCAGTCAGCCCTTTTGAGTTCC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCTACCATGGCTCTCCTaGATGCAGGAGGGGATATTG +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQLPWLS*MQEGIL
Trigger: CAATATCCCCTCCTGCATTCAGGAGAGCCATGGTAG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAGGAAGGCTGGGACTATaGAACTGCAGGGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREGRLGL*NCRAGQ
Trigger: TTGCCCAGCCCTGCAGTTTCATAGTCCCAGCCTTCC...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGTTGCCTCAGGTGACTTaGATGGGACTGCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQLPQVT*MGLLMP
Trigger: AGGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAA...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACTGGCTTCTGGTCTGGTaGATTATTGCGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENWLLVW*IIAEGW
Trigger: CCAGCCCTCCGCAATAATTCACCAGACCAGAAGCCA...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTTGGGGGCTAGCACGGTaGACCGGGGGCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGWGLAR*TGGQGS
Trigger: GCTGCCCTGGCCCCCGGTGCACCGTGCTAGCCCCCA...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTTTTCGCTTGCGGTGCTaGAAGTCCTGCTCGTACTGT +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVFRLRC*KSCSYC
Trigger: ACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAA...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTCAGGTCCTGGCCCGCTaGGATCATGCAGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIQVLAR*DHAVDV
Trigger: GACATCCACTGCATGATCGCAGCGGGCCAGGACCTG...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACATACCGAGGTCCCATTaGTGCTGTACGGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHIPRSH*CCTVKF
Trigger: GAACTTCACCGTACAGCAGCAATGGGACCTCGGTAT...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTCCAGGAACGAAATTaGCTGGTTTTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHFQERN*LVFPLH
Trigger: GTGGAGGGGGAAAACCAGGCAATTTCGTTCCTGGAA...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTGGGTTGGGCAGTACGTaGCTTCAGTGTTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTGLGST*LQCLAP
Trigger: AGGGGCCAAACACTGAAGGCACGTACTGCCCAACCC...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCGAAAACATGAGCCAATaGCTGAGAGTCACCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVENMSQ*LRVTCV
Trigger: CACACAGGTGACTCTCAGGCATTGGCTCATGTTTTC...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGTCGCTGGACGAAGATaGAGACACTTTGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQVAGRR*RHFASG
Trigger: ACCTGAGGCAAAGTGTCTGCATCTTCGTCCAGCGAC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTGTCGCTGGACGAAGATaGAGACACTTTGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFVAGRR*RHFASG
Trigger: ACCTGAGGCAAAGTGTCTGCATCTTCGTCCAGCGAC...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGACCTGGATGATGTCTaGCTGGAACCCAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQDLDDV*LEPKIQ
Trigger: CTGGATCTTGGGTTCCAGGCAGACATCATCCAGGTC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTGCGCGGGGCCTCTGGTaGGGCTGGGGCCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFARGLW*GWGLMV
Trigger: CACCATGAGGCCCCAGCCCCACCAGAGGCCCCGCGC...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAACAGCTCGTTGTCCTTaGCGTTCACATTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGTARCP*RSHWHH
Trigger: ATGGTGCCAATGTGAACGCCAAGGACAACGAGCTGT...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCTGAGACTAGCTCCATaGGACACCAATAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFLRLAP*DTNSSA
Trigger: GGCAGAGCTATTGGTGTCCCATGGAGCTAGTCTCAG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTTCCAGACATCCCCGTTaGCCAGCGCATACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTSRHPR*PAHTGR
Trigger: CCTACCAGTATGCGCTGGCCAACGGGGATGTCTGGA...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTGCTCCAGGGCGGGGTaGCGTCGGCCACGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFCSRAG*RRPRQG
Trigger: ACCCTGGCGTGGCCGACGCCACCCCGCCCTGGAGCA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTCCAGGGCTGTTGGGCTaGCCTGGATTCCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCPGLLG*PGFQEP
Trigger: GGGCTCCTGGAATCCAGGCCAGCCCAACAGCCCTGG...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACCAGGGCTGTTGGGCTaGCCTGGATTCCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPPGLLG*PGFQEP
Trigger: GGGCTCCTGGAATCCAGGCCAGCCCAACAGCCCTGG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTACCCATGTAGATTCCTaGCTCCCTCTGAACACAGCG +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVTHVDS*LPLNTA
Trigger: CGCTGTGTTCAGAGGGAGCCAGGAATCTACATGGGT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGTTGGCTGAGATGGGCTaGGCTGAAACAGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGLAEMG*AETVWI
Trigger: TATCCAGACTGTTTCAGCCCAGCCCATCTCAGCCAA...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGATTGGCTGAGATGGGCTaGGCTGAAACAGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGLAEMG*AETVWI
Trigger: TATCCAGACTGTTTCAGCCCAGCCCATCTCAGCCAA...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTGAGGTGGAGGCAGGCTaGCCCCTAATTGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTEVEAG*PLIACS
Trigger: AGAGCAAGCAATTAGGGGCCAGCCTGCCTCCACCTC...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAATCCTGGCATTGGGGTaGAGGTGGCCTGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREILALG*RWPDAE
Trigger: CTCAGCATCAGGCCACCTCCACCCCAATGCCAGGAT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCAGAATACATCTATCCTaGCATTGGGGTGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLRIHLS*HWGGGG
Trigger: GCCACCTCCACCCCAATGCCAGGATAGATGTATTCT...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGGCGCTCAGTGGGTTaGGCAGTACGTGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYRERRSVG*AVRAFS
Trigger: ACTGAAGGCACGTACTGCCCAACCCACTGAGCGCCT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCCGCGGCTCATTCATTaGAGGTTGGTCTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQPRLIH*RLVSNL
Trigger: CAAGTTGGAGACCAACCTCCAATGAATGAGCCGCGG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGGATAACTCTGAGCAGGACTATGGGTCTCAGCTTAGCAGGTCCCCTCCCCTGCAAAGCAAAGGGTCGCTaGACGAAGATGCAGACACTT +
Preference number: 4 (lower is better)
Translates to: GITLSRTMGLSLAGPLPCKAKGR*TKMQTL
Trigger: AAGTGTCTGCATCTTCGTCCAGCGACCCTTTGCTTT...GCAGGGGAGGGGACCTGCTAAGCTGAGACCCATAGTCCTGCTCAGAGTTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGATGGATGATGTCTGCCTaGAACCCAAGATCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGWMMSA*NPRSSI
Trigger: GATGCTGGATCTTGGGTTCCAGGCAGACATCATCCA...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGAGTTCCAGATGGACCTaGATGATGTCTGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGSSRWT*MMSAWN
Trigger: GTTCCAGGCAGACATCATCCAGGTCCATCTGGAACT...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTTGCTCTTATGTGCCCTaGGGCAGGGGAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMICSYVP*GRGDHP
Trigger: GGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCA...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGATTATTGCGGAGGGCTaGGGGTCTGCAGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQIIAEG*GSADFS
Trigger: GGAAAAGTCTGCAGACCCCCAGCCCTCCGCAATAAT...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGTGGCAAGGGGCTACGTaGAAGTTACCTCAGTACGAT +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGWQGAT*KLPQYD
Trigger: ATCGTACTGAGGTAACTTCCACGTAGCCCCTTGCCA...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 72 bp GGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTaGCAGAGTCATCCACTGACCATTGGAGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GEGYSFWHRGSL*QSHPLTIGAFA
Trigger: AGCAAAGGCTCCAATGGTCAGTGGATGACTCTGCAAAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGCTTGTGCCTCAGCTGTaGCTTCATGATCACATCATG +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGLVPQL*LHDHIM
Trigger: CATGATGTGATCATGAAGTCACAGCTGAGGCACAAG...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGATTGCTGCTGTACGGTaGAGTTCTGCCTCCGATCAA +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQIAAVR*SSASDQ
Trigger: TTGATCGGAGGCAGAACTTCACCGTACAGCAGCAAT...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTATTGCTGCTGTACGGTaGAGTTCTGCCTCCGATCAA +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAIAAVR*SSASDQ
Trigger: TTGATCGGAGGCAGAACTTCACCGTACAGCAGCAAT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCACCCCCTTGCTTCCCCTaGGCCCAGGTATGTCATTCC +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPPPCFP*AQVCHS
Trigger: GGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGG...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTACACCCTTCTGCCTTTaGCACTTCCATCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFTPFCL*HFHPRG
Trigger: TCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGT...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTTGCAGGAGGGGATATTaGCCACGTGCACCCTGGATT +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTCRRGY*PRAPWI
Trigger: AATCCAGGGTGCACGTGGTCAATATCCCCTCCTGCA...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGAATAGCTCTGCCATCTaGATCTGTCCCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQNSSAI*ICPQKA
Trigger: TGCCTTCTGGGGACAGATGCAGATGGCAGAGCTATT...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR GCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCACGGCCACGCCAGGGTTaGCATAGGCCATGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPRPRQG*HRPCCS
Trigger: ACTACAGCATGGCCTATGGCAACCCTGGCGTGGCCG...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTTTCCAGGAACGAAATTaGCTGGTTTTCCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVFQERN*LVFPLH
Trigger: GTGGAGGGGGAAAACCAGGCAATTTCGTTCCTGGAA...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCAGGGCATCACCACTCCTaGAAGTGCAGGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPGHHHS*KCRLGA
Trigger: GGCTCCCAGCCTGCACTTGCAGGAGTGGTGATGCCC...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGAGCAAGGGATAACCTaGAGCTTATCGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAEQGIT*SLSGTP
Trigger: TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTC...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCAATCTAATGAGGAGCTaGCATAGGACCTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLNLMRS*HRTWVS
Trigger: TGAGACCCAGGTCCTATGGCAGCTCCTCATTAGATT...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAGGAGGGCTGGGGGTCTaGAGACTTTTCCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPGGLGV*RLFLGV
Trigger: CACACCCAGGAAAAGTCTGCAGACCCCCAGCCCTCC...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCCAGGTGGCTGCAGCATaGAGAGGTGTCCACAGCTCG +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTQVAAA*RGVHSS
Trigger: CGAGCTGTGGACACCTCTCCATGCTGCAGCCACCTG...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAATCCAGTCCAGGTCCTaGCCCGCTGCGATCATGCAG +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPIQSRS*PAAIMQ
Trigger: CTGCATGATCGCAGCGGGCCAGGACCTGGACTGGAT...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTACTGGCCTCTCTCCCTaGAAAAGCATTCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGTGLSP*KSIPME
Trigger: TTCCATTGGAATGCTTTTCCAGGGAGAGAGGCCAGT...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAACTGGCCTCTCTCCCTaGAAAAGCATTCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGTGLSP*KSIPME
Trigger: TTCCATTGGAATGCTTTTCCAGGGAGAGAGGCCAGT...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAGTCCAGCTCCCTCTCTaGGTTATGGGGCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPVQLPL*VMGLWG
Trigger: CCCCCATAGCCCCATAACCCAGAGAGGGAGCTGGAC...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGAGCCCACCCCAAATaGCAAGGTCGTGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYRERAHPK*QGRGKH
Trigger: ATGCTTCCCACGACCTTGCCATTTGGGGTGGGCTCT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACATTTCAGCGTCAGTCTaGGCTCATACTGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDISASV*AHTVLQ
Trigger: CTGTAAAACAGTATGAGCCCAGACTGACGCTGAAAT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACAGCATCTATACTTGGTaGCAAATGTTATCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDSIYTW*QMLSRG
Trigger: ACCCCTGGATAACATTTGCCACCAAGTATAGATGCT...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTCCAGCATCTATACTTaGTGGCAAATGTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPSSIYT*WQMLSR
Trigger: CCTGGATAACATTTGCCACCAAGTATAGATGCTGGA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGACTGAAAGTTCCAGATaGACCTGGATGATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGTESSR*TWMMSA
Trigger: GGCAGACATCATCCAGGTCCATCTGGAACTTTCAGT...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTAGCTGCCATAGGACCTaGGTCTCAGCAGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMISCHRT*VSAGAR
Trigger: CCTAGCTCCTGCTGAGACCCAGGTCCTATGGCAGCT...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTACAAGAGAGACCTGTTaGGGAGAGGGCTATAGCTTC +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVTRETC*GEGYSF
Trigger: GAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTGGGAAGCAGGCCCTCTaGCCAACAAGAGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIGKQAL*PTRETC
Trigger: ACAGGTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCC...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCGTGTGTGTGTTAATGTaGCATGCATGTACTGATCCG +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETVCVLM*HACTDP
Trigger: CGGATCAGTACATGCATGTCACATTAACACACACAC...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACACACCCTTCTGCCTTTaGCACTTCCATCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENTPFCL*HFHPRG
Trigger: TCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGT...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCGTTCCAGCCACAGCCTaGGATGTTGAAGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTVPATA*DVEEPT
Trigger: GGTGGGCTCTTCAACATCTCAGGCTGTGGCTGGAAC...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTGCTAAGGTTGGCTCATaGGGGATTTCAGCGTCAGTC +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTAKVGS*GISASV
Trigger: GACTGACGCTGAAATCCCTCATGAGCCAACCTTAGC...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCCTTGAATGGGACTGCTaGTGCCTGTGGTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTLEWDC*CLWSPR
Trigger: CCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAG...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTCAGTCTTCTAGACACTaGTCTCAAGCTGCTATTATA +
Preference number: 4 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPQSSRH*SQAAII
Trigger: TATAATAGCAGCTTGAGATCAGTGTCTAGAAGACTG...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGAGACGGACTATGTAATAAATaGGCCACCATGAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RWHLQCPWEAGPLANKRDGLCNK*ATMSKK
Trigger: TTTCTTGCTCATGGTGGCTCATTTATTACATAGTCC...GTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTATCCATTAGTGGGGTaGGGGGACTATGTAATAAAT +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPYPLVG*GDYVIN
Trigger: ATTTATTACATAGTCCCCTCACCCCACTAATGGATA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTCCTCAAAGTTGTCGATaGAGCACTGGTGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTPQSCR*STGVGL
Trigger: CAGCCCTACACCAGTGCTGCATCGACAACTTTGAGG...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGCTCAAGGATGACTTGTaGCTCAGCTGTGACTTCATG +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQLKDDL*LSCDFM
Trigger: CATGAAGTCACAGCTGAGGCACAAGTCATCCTTGAG...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTCCGCTGATCCTCAGCTaGACTCCGCTGCCACAGGAT +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCPLILS*TPLPQD
Trigger: ATCCTGTGGCAGCGGAGTGCAGCTGAGGATCAGCGG...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGAAAACATGAGCCAATaGCTGAGAGTCACCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAENMSQ*LRVTCV
Trigger: CACACAGGTGACTCTCAGGCATTGGCTCATGTTTTC...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTCCCGAATCCACCCCTaGCATGGAGGGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTSRIHP*HGGRQI
Trigger: AATCTGCCTCCCTCCATGGCAGGGGTGGATTCGGGA...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTAATCTAATGAGGAGCTaGCATAGGACCTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESANLMRS*HRTWVS
Trigger: TGAGACCCAGGTCCTATGGCAGCTCCTCATTAGATT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCAGCCTTTGCTCTTATGTaGCCTGGGGCAGGGGAGACC +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPAFALM*PGAGET
Trigger: GGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGC...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGGAGGGCTGGGGGTCTaGAGACTTTTCCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCGGLGV*RLFLGV
Trigger: CACACCCAGGAAAAGTCTGCAGACCCCCAGCCCTCC...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCCAGCAGGGCCACGCTaGCCTCGAAGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTPAGPR*PRRTLS
Trigger: AGAAAGTGTCCTTCGAGGCCAGCGTGGCCCTGCTGG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACAGGTGGCTGCAGCATaGAGAGGTGTCCACAGCTCG +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPQVAAA*RGVHSS
Trigger: CGAGCTGTGGACACCTCTCCATGCTGCAGCCACCTG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTTCTTGGGTGATGCCCTaGTATGCCATGCAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMISWVMP*YAMQVS
Trigger: CGAGACCTGCATGGCATACCAGGGCATCACCCAAGA...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGTCCAGTTCACCTCGTaGGATCTTGGTAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQVQFTS*DLGRKF
Trigger: GAATTTCCTACCAAGATCCCACGAGGTGAACTGGAC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCTGGGCTGAAACAGTCTaGATATTCACAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLWAETV*IFTKTP
Trigger: TGGGGTCTTTGTGAATATCCAGACTGTTTCAGCCCA...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCCAAAAAGGCAAAAGCTaGGCCCGGGATCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTQKGKS*ARDPEH
Trigger: GTGCTCGGGATCCCGGGCCCAGCTTTTGCCTTTTTG...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGCAGTGCCCATGCCATaGGCATCTCCAAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCAVPMP*ASPKGV
Trigger: GACCCCCTTTGGAGATGCCCATGGCATGGGCACTGC...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCATCCCAGCCTTCTGGGTaGAGAGGAATAGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPSQPSG*RGIAQE
Trigger: CTCCTGGGCTATTCCTCTCCACCCAGAAGGCTGGGA...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGATCATCCACTGACCATTaGAGCCTTTGCTCTTATGTG +
Preference number: 4 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGSSTDH*SLCSYV
Trigger: CACATAAGAGCAAAGGCTCCAATGGTCAGTGGATGA...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTCATCCACTGACCATTaGAGCCTTTGCTCTTATGTG +
Preference number: 4 (lower is better)
Translates to: QQERPVGERAIASGTGGHSSTDH*SLCSYV
Trigger: CACATAAGAGCAAAGGCTCCAATGGTCAGTGGATGA...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGTGACATGCATGTACTaGTCCGGAGAAGCCTTTATA +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQVTCMY*SGEAFI
Trigger: TATAAAGGCTTCTCCGGATCAGTACATGCATGTCAC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCGTGGTAATGAGACTCTaGGTCTTAACTTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLVVMRL*VLTSIL
Trigger: AAGGATGGAAGTTAAGACTCAGAGTCTCATTACCAC...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCACTGACTCTGCACACATaGCTGATGGAGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPLTLHT*LMEVEG
Trigger: CCCTTCCACCTCCATCAGTCATGTGTGCAGAGTCAG...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTATCACTCAGGCTCCCTaGAGTCCAGCTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCITQAP*SPAPSL
Trigger: CAGAGAGGGAGCTGGACTTCAGGGAGCCTGAGTGAT...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACTGGTTTATCCCTGGCTaGAAACATGAGCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENWFIPG*KHEPMP
Trigger: AGGCATTGGCTCATGTTTTCAGCCAGGGATAAACCA...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTAAGGAACAGTTCTCCTaGCTCTGTCTTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAKEQFS*LCLIPP
Trigger: AGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAGAAGGCAGCTATCACTaGAAGTTCCAGATGGACCTG +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREEGSYH*KFQMDL
Trigger: CAGGTCCATCTGGAACTTTCAGTGATAGCTGCCTTC...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTGAAGGCAGCTATCACTaGAAGTTCCAGATGGACCTG +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTEGSYH*KFQMDL
Trigger: CAGGTCCATCTGGAACTTTCAGTGATAGCTGCCTTC...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCGCTCATGCTTTCGCTTaGGGTGCTGCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTAHAFA*GAASPA
Trigger: AGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGC...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCATCCGCAATCATCTGCTaGTCAGGAGCCACCCGCATC +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPSAIIC*SGATRI
Trigger: GATGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGA...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTTCCGCAATCATCTGCTaGTCAGGAGCCACCCGCATC +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCSAIIC*SGATRI
Trigger: GATGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGA...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAATACCGAGGTCCCATTaGTGCTGTACGGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREIPRSH*CCTVKF
Trigger: GAACTTCACCGTACAGCAGCAATGGGACCTCGGTAT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTTCAGATGGCAGACGATaGAGCAGGAAGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMISDGRR*SRKQNH
Trigger: GTGGTTCTGCTTCCTGCTGCATCGTCTGCCATCTGA...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTTGTGGGCAGTGCCCATaGCATGGGCATCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCCGQCP*HGHLQR
Trigger: CCTTTGGAGATGCCCATGGCATGGGCACTGCCCACA...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTGAGCAAGGGATAACCTaGAGCTTATCGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTEQGIT*SLSGTP
Trigger: TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTC...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCACACTGATCTCAAGCTaGTATTATAGAGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLTLISS*YYRVPQ
Trigger: TTGGGGGACTCTATAATAGCAGCTTGAGATCAGTGT...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGTCCCGAATCCACCCCTaGCATGGAGGGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTSRIHP*HGGRQI
Trigger: AATCTGCCTCCCTCCATGGCAGGGGTGGATTCGGGA...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAACTTCCCCAAGCTACTTaGCAGAAACTCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYRELPQAT*QKLTVW
Trigger: CCAGACTGTGAGTTTCTGGCAAGTAGCTTGGGGAAG...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTCTTCCCCAAGCTACTTaGCAGAAACTCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTLPQAT*QKLTVW
Trigger: CCAGACTGTGAGTTTCTGGCAAGTAGCTTGGGGAAG...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTCTCGCAGAGGTCATATaGCATGTTCCCATCCGAGTT +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTLAEVI*HVPIRV
Trigger: AACTCGGATGGGAACATGCCATATGACCTCTGCGAG...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCATCCACACGCACTCCATaGTCCAGGAGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPSTRTP*SRRSSA
Trigger: AGCTGAGCTCCTCCTGGACCATGGAGTGCGTGTGGA...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCCCTTCCTATACAGGTTaGTCCTGTCCGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTPSYTG*SCPTGW
Trigger: CCAGCCTGTCGGACAGGACCAACCTGTATAGGAAGG...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTACCCATGTAGATTCCTaGCTCCCTCTGAACACAGCG +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMITHVDS*LPLNTA
Trigger: CGCTGTGTTCAGAGGGAGCCAGGAATCTACATGGGT...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGGATGGTCACACAGCTaGCTCCTGGCATGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCGWSHS*LLAWAE
Trigger: TTCTGCCCATGCCAGGAGCCAGCTGTGTGACCATCC...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCGAGGAAAACATGATTTaGTTGATTCCAGGAACGAAA +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPEENMI*LIPGTK
Trigger: TTTCGTTCCTGGAATCAACCAAATCATGTTTTCCTC...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGTGGGCTGAAACAGTCTaGATATTCACAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQWAETV*IFTKTP
Trigger: TGGGGTCTTTGTGAATATCCAGACTGTTTCAGCCCA...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTATGAAACTGCAGGGCTaGGCAAGACCCAACTCTAGC +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIMKLQG*ARPNSS
Trigger: GCTAGAGTTGGGTCTTGCCCAGCCCTGCAGTTTCAT...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCATCCCTCTCTGGGTTATaGGGCTATGGGGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPSLSGL*GYGGHS
Trigger: ACTGTGGCCCCCATAGCCCCATAACCCAGAGAGGGA...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCAATCCTGGCATTGGGGTaGAGGTGGCCTGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPILALG*RWPDAE
Trigger: CTCAGCATCAGGCCACCTCCACCCCAATGCCAGGAT...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTAGAATACATCTATCCTaGCATTGGGGTGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTRIHLS*HWGGGG
Trigger: GCCACCTCCACCCCAATGCCAGGATAGATGTATTCT...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTTCATTCATTGGAGGTTaGTCTCCAACTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGSFIGG*SPTCLS
Trigger: TGAGAGACAAGTTGGAGACCAACCTCCAATGAATGA...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGTCCAGCATCTATACTTaGTGGCAAATGTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: VSNLSLNTQETYRESSPGSSIYT*WQMLSR
Trigger: CCTGGATAACATTTGCCACCAAGTATAGATGCTGGA...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGGGAAGCAGGCCCTCTaGCCAACAAGAGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCGKQAL*PTRETC
Trigger: ACAGGTCTCTCTTGTTGGCCAGAGGGCCTGCTTCCC...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCAACTGGTGTAGGGCTGTaGGTCCGTCCTCATTGCACA +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPTGVGL*VRPHCT
Trigger: TGTGCAATGAGGACGGACTCACAGCCCTACACCAGT...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTACTGGTGTAGGGCTGTaGGTCCGTCCTCATTGCACA +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCTGVGL*VRPHCT
Trigger: TGTGCAATGAGGACGGACTCACAGCCCTACACCAGT...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCCATGCAGGTCTCGATaGCATCCAGGGTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTPCRSR*HPGWVH
Trigger: ATGAACCCACCCTGGATGTCATCGAGACCTGCATGG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGGGTCTGAGTTCCTCTaGAAAGCAGAGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCGSEFL*KAEPTS
Trigger: AGAGGTGGGCTCTGCTTTTCAGAGGAACTCAGACCC...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACGTGACATGCATGTACTaGTCCGGAGAAGCCTTTATA +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENVTCMY*SGEAFI
Trigger: TATAAAGGCTTCTCCGGATCAGTACATGCATGTCAC...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAACATTCCTACACACACTaGTCGAGCTTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREHSYTH*SSLCVC
Trigger: ACACACACACAAGCTCGATCAGTGTGTGTAGGAATG...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTAAAGAGCAGATCCCATaGCCAAAGTTGTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTKEQIP*PKLWHK
Trigger: CTTGTGCCACAACTTTGGTCATGGGATCTGCTCTTT...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTCACAGCCTGAGATGTTaGAGAGCCCACCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCHSLRC*RAHPKW
Trigger: CCATTTGGGGTGGGCTCTTCAACATCTCAGGCTGTG...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTTGGTTTATCCCTGGCTaGAAACATGAGCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTWFIPG*KHEPMP
Trigger: AGGCATTGGCTCATGTTTTCAGCCAGGGATAAACCA...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCTATCCATTAGTGGGGTaGGGGGACTATGTAATAAAT +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETYPLVG*GDYVIN
Trigger: ATTTATTACATAGTCCCCTCACCCCACTAATGGATA...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTCGGTGCTGCAAGTCCTaGTCGTACTGTGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCRCCKS*SYCAHF
Trigger: GAAATGGGCACAGTACGAGCAGGACTTGCAGCACCG...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTTGCTTTCGCTTGCGGTaGTGCAAGTCCTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCCFRLR*CKSCSY
Trigger: GTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCA...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGGGTGATGCCCTGGTATaGCATGCAGGTCTCGATGAC +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTGDALV*HAGLDD
Trigger: GTCATCGAGACCTGCATGGCATACCAGGGCATCACC...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAATCCATGGATGTCCTTaGACTGAGACTAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREIHGCP*TETSSM
Trigger: CATGGAGCTAGTCTCAGTGCAAGGACATCCATGGAT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTCAGATGGCAGACGATaGAGCAGGAAGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTSDGRR*SRKQNH
Trigger: GTGGTTCTGCTTCCTGCTGCATCGTCTGCCATCTGA...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCAGAGTCCCCCAAAGATaGTGGCTGAAGGCAGCTATC +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTRVPQR*WLKAAI
Trigger: GATAGCTGCCTTCAGCCAGCATCTTTGGGGGACTCT...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTACACTGATCTCAAGCTaGTATTATAGAGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESATLISS*YYRVPQ
Trigger: TTGGGGGACTCTATAATAGCAGCTTGAGATCAGTGT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAATATGATGGTGAGCCATaGAGCACCTGCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREYDGEP*STCFGS
Trigger: ACTTCCAAAGCAGGTGCTGCATGGCTCACCATCATA...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGGACCATTGGAGCCTTTaGTCTTATGTGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTDHWSL*SYVPWG
Trigger: GCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTC...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTGACTTTTCCTGGGTGTaGAGAGCCAGGCCCCGCACG +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGDFSWV*RARPRT
Trigger: CGTGCGGGGCCTGGCTCTGCACACCCAGGAAAAGTC...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTTTCACATTGGCACCATaGGAGAGGAGCAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIFTLAP*ERSSFT
Trigger: TGTGAAGCTGCTCCTCTCCCATGGTGCCAATGTGAA...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTACAGCTCGTTGTCCTTaGCGTTCACATTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMITARCP*RSHWHH
Trigger: ATGGTGCCAATGTGAACGCCAAGGACAACGAGCTGT...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAGCTGCGATCATGCAGTaGATGTCCGCAATCATCTGC +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPAAIMQ*MSAIIC
Trigger: GCAGATGATTGCGGACATCCACTGCATGATCGCAGC...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCGCTGCGATCATGCAGTaGATGTCCGCAATCATCTGC +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTAAIMQ*MSAIIC
Trigger: GCAGATGATTGCGGACATCCACTGCATGATCGCAGC...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTCTATGTGCAGCAGTGTaGCACCCTGGGCATCTATCC +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCLCAAV*HPGHLS
Trigger: GGATAGATGCCCAGGGTGCCACACTGCTGCACATAG...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCCTGTCAGGTGTGGCTaGTGGCTCAGACTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTPVRCG*WLRLWD
Trigger: ATCCCAAAGTCTGAGCCACCAGCCACACCTGACAGG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTCCTGTCAGGTGTGGCTaGTGGCTCAGACTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCPVRCG*WLRLWD
Trigger: ATCCCAAAGTCTGAGCCACCAGCCACACCTGACAGG...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCAGGCTGGGAGCCCCTaGGTGAGGCGGGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFQAGSP*VRRELK
Trigger: TTTGAGTTCCCGCCTCACCCAGGGGCTCCCAGCCTG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCACAAATGGCAAGGTCGTaGGAAGCATCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPQMARS*EASVHL
Trigger: CAGGTGCACAGATGCTTCCCACGACCTTGCCATTTG...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCCACCAACAACCACAATaGTCTTATGTTATTACAAAG +
Preference number: 4 (lower is better)
Translates to: LTIGAFALMCPGAGETIPHQQPQ*SYVITK
Trigger: CTTTGTAATAACATAAGACCATTGTGGTTGTTGGTG...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAATACACCAGTGGCTTCTaGTCTGGTGAATTATTGCGG +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYREYTSGF*SGELLR
Trigger: CCGCAATAATTCACCAGACCAGAAGCCACTGGTGTA...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
3UTR CAA 72 bp TTGGGGCATATGATGGTGAGCCATGCAGCACCTGCTTaGGAAGTGGTCTCCTTTAATCTAATGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGHMMVSHAAPA*EVVSFNLMRSC
Trigger: GCAGCTCCTCATTAGATTAAAGGAGACCACTTCCAAAGCAGGTGCTGCATGGCTCACCATCATATGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCCCCCTTGCTTCCCCTaGGCCCAGGTATGTCATTCC +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGPPCFP*AQVCHS
Trigger: GGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTAAAGAGCAGATCCCATaGCCAAAGTTGTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIKEQIP*PKLWHK
Trigger: CTTGTGCCACAACTTTGGTCATGGGATCTGCTCTTT...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTAAGGAACAGTTCTCCTaGCTCTGTCTTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTKEQFS*LCLIPP
Trigger: AGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTT...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGACTATGTAATAAATaGGCCACCATGAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQGLCNK*ATMSKK
Trigger: TTTCTTGCTCATGGTGGCTCATTTATTACATAGTCC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTACCTTCTCCAGCAGCTaGAGCTCCGTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFTFSSS*SSVSRS
Trigger: GGACCTGCTGACGGAGCTGCAGCTGCTGGAGAAGGT...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCGGTGGCACTTGCAATaGCCATGGGAAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFRWHLQ*PWEAGP
Trigger: AGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATTTCAGCGTCAGTCTaGGCTCATACTGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENISASV*AHTVLQ
Trigger: CTGTAAAACAGTATGAGCCCAGACTGACGCTGAAAT...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCGGAAAAGGAGGGAATaGCCTCAGGCGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGRKRRE*PQALSG
Trigger: CCCACTGAGCGCCTGAGGCCATTCCCTCCTTTTCCG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTACTGAAAGTTCCAGATaGACCTGGATGATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PLPHPSAFDTSIQEENMITESSR*TWMMSA
Trigger: GGCAGACATCATCCAGGTCCATCTGGAACTTTCAGT...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACTGGTTGACTTTGCCTaGTTACTCCCAGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPLVDFA*LLPAPE
Trigger: TTCGGGAGCTGGGAGTAACCAGGCAAAGTCAACCAG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACCTAATTGCTTGCTCTaGCAGCTCAGTCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPPNCLL*QLSLRR
Trigger: CCTCCTTAGACTGAGCTGTCAGAGCAAGCAATTAGG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACCAGTCTTCTAGACACTaGTCTCAAGCTGCTATTATA +
Preference number: 4 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENQSSRH*SQAAII
Trigger: TATAATAGCAGCTTGAGATCAGTGTCTAGAAGACTG...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGGATGGGAAGGTATCTaGCACCAACAACCACAATGG +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCGWEGI*HQQPQW
Trigger: CCATTGTGGTTGTTGGTGTCAGATACCTTCCCATCC...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCATCCATGGATGTCCTTaGACTGAGACTAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTIHGCP*TETSSM
Trigger: CATGGAGCTAGTCTCAGTGCAAGGACATCCATGGAT...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCACTCAAGGATGACTTGTaGCTCAGCTGTGACTTCATG +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPLKDDL*LSCDFM
Trigger: CATGAAGTCACAGCTGAGGCACAAGTCATCCTTGAG...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCTTTAAAAACCTGAGATaGATTTGGCAGCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: SGDLNGTADACGPQGTETFKNLR*IWQQIA
Trigger: TGCAATTTGCTGCCAAATGCATCTCAGGTTTTTAAA...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTGTGCTAAGGAAGGGGTaGCTGAGCAGCTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGVLRKG*LSSLAA
Trigger: TGCAGCCAAGCTGCTCAGCCACCCCTTCCTTAGCAC...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTTGGTGGCTCAGACTTTaGGATAACTCTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCWWLRL*DNSEQD
Trigger: GTCCTGCTCAGAGTTATCCCAAAGTCTGAGCCACCA...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTGAGGAAAACATGATTTaGTTGATTCCAGGAACGAAA +
Preference number: 4 (lower is better)
Translates to: QERPVGERAIASGTGGHFEENMI*LIPGTK
Trigger: TTTCGTTCCTGGAATCAACCAAATCATGTTTTCCTC...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTCCCTCTCTGGGTTATaGGGCTATGGGGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFSLSGL*GYGGHS
Trigger: ACTGTGGCCCCCATAGCCCCATAACCCAGAGAGGGA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTGTTTTACAGCCAATaGTACGTGTGTTTTAGATCA +
Preference number: 4 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVLFYSQ*YVCFRS
Trigger: TGATCTAAAACACACGTACCATTGGCTGTAAAACAG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAATCATTCATTGGAGGTTaGTCTCCAACTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYRESFIGG*SPTCLS
Trigger: TGAGAGACAAGTTGGAGACCAACCTCCAATGAATGA...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCATCTATACTTGGTaGCAAATGTTATCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HWRLVSNLSLNTQETYRESIYTW*QMLSRG
Trigger: ACCCCTGGATAACATTTGCCACCAAGTATAGATGCT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGACAAGAGAGACCTGTTaGGGAGAGGGCTATAGCTTC +
Preference number: 4 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTTRETC*GEGYSF
Trigger: GAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGT...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCACATTCCTACACACACTaGTCGAGCTTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CLPGTQDPASILGGKCYPHSYTH*SSLCVC
Trigger: ACACACACACAAGCTCGATCAGTGTGTGTAGGAATG...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTGGGAGACTCAGCAGTaGGGGGAGAACAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFWETQQ*GENSHS
Trigger: TGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCCAGATGGACCTGGATaGTGTCTGCCTGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGPDGPG*CLPGTQ
Trigger: TTGGGTTCCAGGCAGACATCATCCAGGTCCATCTGG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCCTTTGGGATGTGGCTaGGCCACAGTTTTGGACCCA +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGPLGCG*ATVLDP
Trigger: TGGGTCCAAAACTGTGGCTCAGCCACATCCCAAAGG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTGCTCATGCTTTCGCTTaGGGTGCTGCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFAHAFA*GAASPA
Trigger: AGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGC...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCCGAGGTCCCATTGCTaGTGTACGGTGAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFPRSHC*CTVKFC
Trigger: GCAGAACTTCACCGTACAGCAGCAATGGGACCTCGG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCAGCACCAGGAAGGCTaGGACTATGAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGQHQEG*DYETAG
Trigger: CCCTGCAGTTTCATAGTCCCAGCCTTCCTGGTGCTG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTACACCAAGAGGTTCTaGCTGAGCCTGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFYTKRF*LSLWAV
Trigger: CACTGCCCACAGGCTCAGCCAGAACCTCTTGGTGTA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCATCTATCCTGGCATTaGGGTGGAGGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGHLSWH*GGGGLM
Trigger: CATCAGGCCACCTCCACCCCAATGCCAGGATAGATG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTCACCAACAACCACAATaGTCTTATGTTATTACAAAG +
Preference number: 4 (lower is better)
Translates to: PMPESHLCVKSAPVRESAHQQPQ*SYVITK
Trigger: CTTTGTAATAACATAAGACCATTGTGGTTGTTGGTG...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCACTTTGGTAAATACTaGCCTTGTCCCCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGHFGKY*PCPPPT
Trigger: TGTGGGAGGGGGACAAGGTCAGTATTTACCAAAGTG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCCTAATTGCTTGCTCTaGCAGCTCAGTCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFPNCLL*QLSLRR
Trigger: CCTCCTTAGACTGAGCTGTCAGAGCAAGCAATTAGG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTTGGTGGCTCAGACTTTaGGATAACTCTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGWWLRL*DNSEQD
Trigger: GTCCTGCTCAGAGTTATCCCAAAGTCTGAGCCACCA...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTAGTTCCAGATGGACCTaGATGATGTCTGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGSSRWT*MMSAWN
Trigger: GTTCCAGGCAGACATCATCCAGGTCCATCTGGAACT...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAATAAATGAGCCACCATaGGCAAGAAACAATGACTTT +
Preference number: 4 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPINEPP*ARNNDF
Trigger: AAAGTCATTGTTTCTTGCTCATGGTGGCTCATTTAT...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCTCGCACAGGTCTATTaGCATCTCATCCATGGATGT +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGLAQVY*HLIHGC
Trigger: ACATCCATGGATGAGATGCCAATAGACCTGTGCGAG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTCTCAAAAGGGCTGACTaGCAAATCTGTCTCACCAAG +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFLKRAD*QICLTK
Trigger: CTTGGTGAGACAGATTTGCCAGTCAGCCCTTTTGAG...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR GCA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTTTAAAAACCTGAGATaGATTTGGCAGCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTFKNLR*IWQQIA
Trigger: TGCAATTTGCTGCCAAATGCATCTCAGGTTTTTAAA...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CCA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTCTGTTTTACAGCCAATaGTACGTGTGTTTTAGATCA +
Preference number: 4 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCLFYSQ*YVCFRS
Trigger: TGATCTAAAACACACGTACCATTGGCTGTAAAACAG...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTGTGGTAATGAGACTCTaGGTCTTAACTTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: YLMENSILKSLVALGLEFVVMRL*VLTSIL
Trigger: AAGGATGGAAGTTAAGACTCAGAGTCTCATTACCAC...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR TCA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTATAAATGAGCCACCATaGGCAAGAAACAATGACTTT +
Preference number: 4 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGINEPP*ARNNDF
Trigger: AAAGTCATTGTTTCTTGCTCATGGTGGCTCATTTAT...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp TCTCCAGCAGCTGCAGCTCCGTCAGCAGGTCCACGTGACTGGCCATaGCCACCGCCCTCCCCAACGCCCTGGCTGGGGGCTAGCACGGTG +
Preference number: 5 (lower is better)
Translates to: SPAAAAPSAGPRDWP*PPPSPTPWLGASTV
Trigger: CACCGTGCTAGCCCCCAGCCAGGGCGTTGGGGAGGGCGGTGGCCATGGCCAGTCACGTGGACCTGCTGACGGAGCTGCAGCTGCTGGAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp GCACCTTCTCCAGCAGCTGCAGCTCCGTCAGCAGGTCCACGTGACTaGCCATGGCCACCGCCCTCCCCAACGCCCTGGCTGGGGGCTAGC +
Preference number: 5 (lower is better)
Translates to: APSPAAAAPSAGPRD*PWPPPSPTPWLGAS
Trigger: GCTAGCCCCCAGCCAGGGCGTTGGGGAGGGCGGTGGCCATGGCCAGTCACGTGGACCTGCTGACGGAGCTGCAGCTGCTGGAGAAGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp CTTCCTCGGCGTCGTTCCTCAGCGAGGCCTCCAGCAGGGCCACGCTaGCCTCGAAGGACACTTTCTTGCGGCGGCCGCCCGTGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: LPRRRSSARPPAGPR*PRRTLSCGGRPCCA
Trigger: AGCGCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCGAGGCCAGCGTGGCCCTGCTGGAGGCCTCGCTGAGGAACGACGCCGAGGAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp GCGAGGCCTCCAGCAGGGCCACGCTGGCCTCGAAGGACACTTTCTTaGGGCGGCCGCCCGTGCTGCGCTTCCGCTCATGCTTTCGCTTGC +
Preference number: 5 (lower is better)
Translates to: ARPPAGPRWPRRTLS*GGRPCCASAHAFAC
Trigger: GCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCGAGGCCAGCGTGGCCCTGCTGGAGGCCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp TGCTCGTACTGTGCCCATTTCTTCAGCTGCTGGGCCCGGCGCTTCTaGGCAGCCCGCAGCCGCTCCAGCGTGGGCACCTTCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CSYCAHFFSCWARRF*AARSRSSVGTFSSS
Trigger: GCTGCTGGAGAAGGTGCCCACGCTGGAGCGGCTGCGGGCTGCCCAGAAGCGCCGGGCCCAGCAGCTGAAGAAATGGGCACAGTACGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp GGGCCACGCTGGCCTCGAAGGACACTTTCTTGCGGCGGCCGCCCGTaGTGCGCTTCCGCTCATGCTTTCGCTTGCGGTGCTGCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: GPRWPRRTLSCGGRP*CASAHAFACGAASP
Trigger: AGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCGAGGCCAGCGTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp CCCGTCCTGGCCATGCTGCTGCCCAGGTGTGTGCTAAGGAAGGGGTaGCTGAGCAGCTTGGCTGCAGCCCGCTGCCGCTTCAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PVLAMLLPRCVLRKG*LSSLAAARCRFSSR
Trigger: TCTGGAGCTGAAGCGGCAGCGGGCTGCAGCCAAGCTGCTCAGCCACCCCTTCCTTAGCACACACCTGGGCAGCAGCATGGCCAGGACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CCACGCTGGCCTCGAAGGACACTTTCTTGCGGCGGCCGCCCGTGCTaGGCTTCCGCTCATGCTTTCGCTTGCGGTGCTGCAAGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PRWPRRTLSCGGRPC*ASAHAFACGAASPA
Trigger: AGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCGAGGCCAGCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp TCCAGGGCGGGGTGGCGTCGGCCACGCCAGGGTTGCCATAGGCCATaGTGTAGTCAGGCACCTCATGCACCTTCCAGACATCCCCGTTGG +
Preference number: 5 (lower is better)
Translates to: SRAGWRRPRQGCHRP*CSQAPHAPSRHPRW
Trigger: CCAACGGGGATGTCTGGAAGGTGCATGAGGTGCCTGACTACAGCATGGCCTATGGCAACCCTGGCGTGGCCGACGCCACCCCGCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp GCTGCCCAGGTGTGTGCTAAGGAAGGGGTGGCTGAGCAGCTTGGCTaGAGCCCGCTGCCGCTTCAGCTCCAGAAGCGTCTGAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: AAQVCAKEGVAEQLG*SPLPLQLQKRLRAL
Trigger: CAGAGCCCTCAGACGCTTCTGGAGCTGAAGCGGCAGCGGGCTGCAGCCAAGCTGCTCAGCCACCCCTTCCTTAGCACACACCTGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CGGCCGCCCGTGCTGCGCTTCCGCTCATGCTTTCGCTTGCGGTGCTaGAAGTCCTGCTCGTACTGTGCCCATTTCTTCAGCTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RPPVLRFRSCFRLRC*KSCSYCAHFFSCWA
Trigger: GGCCCAGCAGCTGAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CGGCGGCCGCCCGTGCTGCGCTTCCGCTCATGCTTTCGCTTGCGGTaGTGCAAGTCCTGCTCGTACTGTGCCCATTTCTTCAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RRPPVLRFRSCFRLR*CKSCSYCAHFFSCW
Trigger: CCAGCAGCTGAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CCTTGTAGCTGCTCCAGGGCGGGGTGGCGTCGGCCACGCCAGGGTTaGCATAGGCCATGCTGTAGTCAGGCACCTCATGCACCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PCSCSRAGWRRPRQG*HRPCCSQAPHAPSR
Trigger: TCTGGAAGGTGCATGAGGTGCCTGACTACAGCATGGCCTATGGCAACCCTGGCGTGGCCGACGCCACCCCGCCCTGGAGCAGCTACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGGGGTGGCTGAGCAGCTaGGCTGCAGCCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: VSNLSLNTQETYRESSPGGWLSS*AAARCR
Trigger: GCGGCAGCGGGCTGCAGCCAAGCTGCTCAGCCACCC...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGCCGATCAAGGGGGCCTaGCCTTCACTGCTACTCTCG +
Preference number: 5 (lower is better)
Translates to: PARWHLQCPWEAGPLANKPIKGA*PSLLLS
Trigger: CGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGG...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp GTGCTGCGCTTCCGCTCATGCTTTCGCTTGCGGTGCTGCAAGTCCTaGTCGTACTGTGCCCATTTCTTCAGCTGCTGGGCCCGGCGCTTC +
Preference number: 5 (lower is better)
Translates to: VLRFRSCFRLRCCKS*SYCAHFFSCWARRF
Trigger: GAAGCGCCGGGCCCAGCAGCTGAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp TCTTGCGGCGGCCGCCCGTGCTGCGCTTCCGCTCATGCTTTCGCTTaGGGTGCTGCAAGTCCTGCTCGTACTGTGCCCATTTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: SCGGRPCCASAHAFA*GAASPARTVPISSA
Trigger: AGCTGAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp AAGGACACTTTCTTGCGGCGGCCGCCCGTGCTGCGCTTCCGCTCATaGTTTCGCTTGCGGTGCTGCAAGTCCTGCTCGTACTGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: KDTFLRRPPVLRFRS*FRLRCCKSCSYCAH
Trigger: ATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CACCCTGGGCATCTATCCAGTCCAGGTCCTGGCCCGCTGCGATCATaGAGTGGATGTCCGCAATCATCTGCTGCTCAGGAGCCACCCGCA +
Preference number: 5 (lower is better)
Translates to: HPGHLSSPGPGPLRS*SGCPQSSAAQEPPA
Trigger: TGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp TGTACGGTGAAGTTCTGCCTCCGATCAAGGGGGCCTTGCCTTCACTaGTACTCTCGCCCGTCCTGGCCATGCTGCTGCCCAGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: CTVKFCLRSRGPCLH*YSRPSWPCCCPGVC
Trigger: GCACACACCTGGGCAGCAGCATGGCCAGGACGGGCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACGGGTGGCTGAGCAGCTaGGCTGCAGCCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENGWLSS*AAARCR
Trigger: GCGGCAGCGGGCTGCAGCCAAGCTGCTCAGCCACCC...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCCCCAGCCAGGGCTGTaGGGCTGGCCTGGATTCCAG +
Preference number: 5 (lower is better)
Translates to: QQERPVGERAIASGTGGHPQPGL*GWPGFQ
Trigger: CTGGAATCCAGGCCAGCCCAACAGCCCTGGCTGGGG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS TCA 90 bp GCACCTTCCAGACATCCCCGTTGGCCAGCGCATACTGGTAGGCACTaGCCGGAGCCCGGAGGCCATTCTCAACAGGCATGTCCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: APSRHPRWPAHTGRH*PEPGGHSQQACPVH
Trigger: GTGAACTGGACATGCCTGTTGAGAATGGCCTCCGGGCTCCGGTCAGTGCCTACCAGTATGCGCTGGCCAACGGGGATGTCTGGAAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CAGTGTGGCACCCTGGGCATCTATCCAGTCCAGGTCCTGGCCCGCTaGGATCATGCAGTGGATGTCCGCAATCATCTGCTGCTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: QCGTLGIYPVQVLAR*DHAVDVRNHLLLRS
Trigger: GCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCAGGGTGCCACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CTCCCTGATGTCCCCGTTGTAGGTGGAGGTCCGCTGATCCTCAGCTaGACTCCGCTGCCACAGGATGGCCTCTCCCTCATACTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LPDVPVVGGGPLILS*TPLPQDGLSLILLP
Trigger: AGGAAGGAGTATGAGGGAGAGGCCATCCTGTGGCAGCGGAGTGCAGCTGAGGATCAGCGGACCTCCACCTACAACGGGGACATCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CATTGCTGCTGTACGGTGAAGTTCTGCCTCCGATCAAGGGGGCCTTaGCTTCACTGCTACTCTCGCCCGTCCTGGCCATGCTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: HCCCTVKFCLRSRGP*LHCYSRPSWPCCCP
Trigger: TGGGCAGCAGCATGGCCAGGACGGGCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACAGCAGCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp TGGGCATCTATCCAGTCCAGGTCCTGGCCCGCTGCGATCATGCAGTaGATGTCCGCAATCATCTGCTGCTCAGGAGCCACCCGCATCTCG +
Preference number: 5 (lower is better)
Translates to: WASIQSRSWPAAIMQ*MSAIICCSGATRIS
Trigger: CGAGATGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGCCTGGATTCGCAGACTaGGGGCATCACCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRPGFAD*GHHHSC
Trigger: GCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAGG...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp GTCCTTCACATCCACACGCACTCCATGGTCCAGGAGGAGCTCAGCTaGCCGCAGGTATCCATTGGCTCCAGCTATGTGCAGCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: VLHIHTHSMVQEELS*PQVSIGSSYVQQCG
Trigger: GCCACACTGCTGCACATAGCTGGAGCCAATGGATACCTGCGGGCAGCTGAGCTCCTCCTGGACCATGGAGTGCGTGTGGATGTGAAGGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS CCA 90 bp ATGTGCAGCAGTGTGGCACCCTGGGCATCTATCCAGTCCAGGTCCTaGCCCGCTGCGATCATGCAGTGGATGTCCGCAATCATCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MCSSVAPWASIQSRS*PAAIMQWMSAIICC
Trigger: GCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCAGGGTGCCACACTGCTGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS CCA 90 bp AGGTGGAGGTCCGCTGATCCTCAGCTGCACTCCGCTGCCACAGGATaGCCTCTCCCTCATACTCCTTCCTATACAGGTTGGTCCTGTCCG +
Preference number: 5 (lower is better)
Translates to: RWRSADPQLHSAATG*PLPHTPSYTGWSCP
Trigger: CGGACAGGACCAACCTGTATAGGAAGGAGTATGAGGGAGAGGCCATCCTGTGGCAGCGGAGTGCAGCTGAGGATCAGCGGACCTCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGCAGGCGCTCAGTGGGTaGGGCAGTACGTGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: VSNLSLNTQETYRESSPGQALSG*GSTCLQ
Trigger: CTGAAGGCACGTACTGCCCAACCCACTGAGCGCCTG...CCCTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCAGGCGCTCAGTGGGTaGGGCAGTACGTGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLQALSG*GSTCLQ
Trigger: CTGAAGGCACGTACTGCCCAACCCACTGAGCGCCTG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGAGGTTGGTCTCCAACTaGTCTCTCAACACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PARWHLQCPWEAGPLANKRLVSN*SLNTQE
Trigger: CTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCT...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp ATCTGCATCAGTGTGGCACCCTGGGCATCTATCCAGTCCAGGTCCTaGCCCGCTGCGATCATGCAGTGGATGTCCGCAATCATCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ICISVAPWASIQSRS*PAAIMQWMSAIICC
Trigger: GCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCAGGGTGCCACACTGATGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373331.2
CDS-3UTR CAA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGACGCTCATGCTTTCGCTaGCGGTGCTGCAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGRSCFR*RCCKSC
Trigger: GCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCG...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTGGTGTCCACAGCTCGTaGTCCTTGGCGTTCACATTG +
Preference number: 5 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPGVHSS*SLAFTL
Trigger: CAATGTGAACGCCAAGGACAACGAGCTGTGGACACC...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp AGGTCCTGGCCCGCTGCGATCATGCAGTGGATGTCCGCAATCATCTaGTGCTCAGGAGCCACCCGCATCTCGTTGATTTTCTCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: RSWPAAIMQWMSAII*CSGATRISLIFSWV
Trigger: CACCCAAGAGAAAATCAACGAGATGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CCGTGTAATATACCGAGGTCCCATTGCTGCTGTACGGTGAAGTTCTaGCTCCGATCAAGGGGGCCTTGCCTTCACTGCTACTCTCGCCCG +
Preference number: 5 (lower is better)
Translates to: PCNIPRSHCCCTVKF*LRSRGPCLHCYSRP
Trigger: CGGGCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACAGCAGCAATGGGACCTCGGTATATTACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCGTGAGTCCGTCCTCATaGCACAAATCAGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVVSPSS*HKSGLT
Trigger: GGTCAGCCCTGATTTGTGCAATGAGGACGGACTCAC...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGCCCGCAGGTATCCATaGGCTCCAGCTATGTGCAGC +
Preference number: 5 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQARRYP*APAMCS
Trigger: GCTGCACATAGCTGGAGCCAATGGATACCTGCGGGC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR CAA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTCCTCGCACAGGTCTATaGGCATCTCATCCATGGATG +
Preference number: 5 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPPRTGL*ASHPWM
Trigger: CATCCATGGATGAGATGCCAATAGACCTGTGCGAGG...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCCGATCAAGGGGGCCTaGCCTTCACTGCTACTCTCG +
Preference number: 5 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVPIKGA*PSLLLS
Trigger: CGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGG...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTCCCCAGCCAGGGCTGTaGGGCTGGCCTGGATTCCAG +
Preference number: 5 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIPQPGL*GWPGFQ
Trigger: CTGGAATCCAGGCCAGCCCAACAGCCCTGGCTGGGG...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCAGGCCACGACAGGCCTaGTGTCAGATGGCAGACGAT +
Preference number: 5 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLRPRQA*CQMADD
Trigger: ATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCT...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGCACACCCTTCTGCCTTaGACACTTCCATCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRHTLLP*TLPSKR
Trigger: CCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTG...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGCATGCAGCACCTGCTTaGGAAGTGGTCTCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: PARWHLQCPWEAGPLANKHAAPA*EVVSFN
Trigger: ATTAAAGGAGACCACTTCCAAAGCAGGTGCTGCATG...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACCCCGCACGGTGGCACTaGCAATGCCCATGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENPARWH*QCPWEA
Trigger: TGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGATGGTCTGGTGAATTATaGCGGAGGGCTGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGWSGEL*RRAGGL
Trigger: CAGACCCCCAGCCCTCCGCAATAATTCACCAGACCA...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp TCCTGGCCCGCTGCGATCATGCAGTGGATGTCCGCAATCATCTGCTaGTCAGGAGCCACCCGCATCTCGTTGATTTTCTCTTGGGTGATG +
Preference number: 5 (lower is better)
Translates to: SWPAAIMQWMSAIIC*SGATRISLIFSWVM
Trigger: CATCACCCAAGAGAAAATCAACGAGATGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGTGAGTCCGTCCTCATaGCACAAATCAGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: QQERPVGERAIASGTGGHVSPSS*HKSGLT
Trigger: GGTCAGCCCTGATTTGTGCAATGAGGACGGACTCAC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCCGCACGGTGGCACTTGCAATGCCCATGGGAAGCAGGCCCTCTGGCCAACAAGACAATTTCCTCAAAGTaGTCGATGCAGCACTGGTGT +
Preference number: 5 (lower is better)
Translates to: PARWHLQCPWEAGPLANKTISSK*SMQHWC
Trigger: ACACCAGTGCTGCATCGACAACTTTGAGGAAATTGT...CTTGTTGGCCAGAGGGCCTGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCACAGCTCGTTGTCCTaGGCGTTCACATTGGCACCA +
Preference number: 5 (lower is better)
Translates to: QQERPVGERAIASGTGGHHSSLS*AFTLAP
Trigger: TGGTGCCAATGTGAACGCCAAGGACAACGAGCTGTG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACATGTTCCCATCCGAGTaGACAGCAAGCAAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: QQERPVGERAIASGTGGHMFPSE*TASKSA
Trigger: GGCCGACTTGCTTGCTGTCAACTCGGATGGGAACAT...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGCTCGTTGATTTTCTCTaGGGTGATGCCCTGGTATGC +
Preference number: 5 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRLVDFL*GDALVC
Trigger: GCATACCAGGGCATCACCCAAGAGAAAATCAACGAG...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCCTCGCACAGGTCTATaGGCATCTCATCCATGGATG +
Preference number: 5 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVPRTGL*ASHPWM
Trigger: CATCCATGGATGAGATGCCAATAGACCTGTGCGAGG...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCAGGGTCCTTATTCTCTaGGTCTGTCCTGGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVRVLIL*VCPGLP
Trigger: AGGGAGACCAGGACAGACCAAGAGAATAAGGACCCT...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GTGAACCAGGAGGCCACGACAGGCCTTGTGTCAGATGGCAGACGATGCAGCAGGTCACCTCGTGGGATCTaGGTAGGAAATTCGGAGAGT +
Preference number: 5 (lower is better)
Translates to: VNQEATTGLVSDGRRCSRSPRGI*VGNSES
Trigger: ACTCTCCGAATTTCCTACCAAGATCCCACGAGGTGA...CCTGCTGCATCGTCTGCCATCTGACACAAGGCCTGTCGTGGCCTCCTGGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTGACCATTGGAGCCTTTGCTCTTATGTGCCCTGGGGCAGGGGAGACCATCCCCTATACCGAGGTCCCATaGCTGCTGTACGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LTIGAFALMCPGAGETIPYTEVP*LLYGEV
Trigger: AACTTCACCGTACAGCAGCAATGGGACCTCGGTATA...GGGGATGGTCTCCCCTGCCCCAGGGCACATAAGAGCAAAGGCTCCAATGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTACATCTATCCTGGCATaGGGGTGGAGGTGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGTSILA*GWRWPD
Trigger: ATCAGGCCACCTCCACCCCAATGCCAGGATAGATGT...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCCTCCCTTCCCAAGGAAAGGCTTaGATGCTGAAGGAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GVLGDSAVRGEQPFTVLPSQGKA*MLKEAA
Trigger: TGCTGCTTCCTTCAGCATCAAAGCCTTTCCTTGGGA...AGGGAGGACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCACAGGGGGTCACTTTaGCAGAGTCATCCACTGACC +
Preference number: 5 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLHRGSL*QSHPLT
Trigger: GGTCAGTGGATGACTCTGCAAAAGTGACCCCCTGTG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTTGGTCTGGTGAATTATaGCGGAGGGCTGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: QERPVGERAIASGTGGHFWSGEL*RRAGGL
Trigger: CAGACCCCCAGCCCTCCGCAATAATTCACCAGACCA...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS TCA 90 bp GCTGGTGACCGTGTAATATACCGAGGTCCCATTGCTGCTGTACGGTaGAGTTCTGCCTCCGATCAAGGGGGCCTTGCCTTCACTGCTACT +
Preference number: 5 (lower is better)
Translates to: AGDRVIYRGPIAAVR*SSASDQGGLAFTAT
Trigger: AGTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACAGCAGCAATGGGACCTCGGTATATTACACGGTCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 90 bp CCACGGCTGCCTGCGCTGGAGGTCCTCCGGCTCAAGGATGACTTGTaGCTCAGCTGTGACTTCATGATCACATCATGCTTGTGTTTTAGC +
Preference number: 5 (lower is better)
Translates to: PRLPALEVLRLKDDL*LSCDFMITSCLCFS
Trigger: GCTAAAACACAAGCATGATGTGATCATGAAGTCACAGCTGAGGCACAAGTCATCCTTGAGCCGGAGGACCTCCAGCGCAGGCAGCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp GGTCTCGATGACATCCAGGGTGGGTTCATCCTCGCAGAGGTCATATaGCATGTTCCCATCCGAGTTGACAGCAAGCAAGTCGGCCCCATA +
Preference number: 5 (lower is better)
Translates to: GLDDIQGGFILAEVI*HVPIRVDSKQVGPI
Trigger: TATGGGGCCGACTTGCTTGCTGTCAACTCGGATGGGAACATGCCATATGACCTCTGCGAGGATGAACCCACCCTGGATGTCATCGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCACAAGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTCGAAGGACACTTTCTaGCGGCGGCCGCCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: PQGTVLLTLSYSSFIRRTSKDTF*RRPPVL
Trigger: CAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCGA...GGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGGTGTCCACAGCTCGTaGTCCTTGGCGTTCACATTG +
Preference number: 5 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQGVHSS*SLAFTL
Trigger: CAATGTGAACGCCAAGGACAACGAGCTGTGGACACC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGGATTCCCAGCCTTCTGGGTGCCACCCGCATCTCGTaGATTTTCTCTTGGGTGATG +
Preference number: 5 (lower is better)
Translates to: CVKSAPVRESAGIPSLLGATRIS*IFSWVM
Trigger: CATCACCCAAGAGAAAATCAACGAGATGCGGGTGGC...ACCCAGAAGGCTGGGAATCCCAGCTGATTCCCTGACAGGAGCCGACTTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTTCCTTCCTATACAGGTaGGTCCTGTCCGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVSFLYR*VLSDRL
Trigger: CAGCCTGTCGGACAGGACCAACCTGTATAGGAAGGA...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCCACACCCTTCTGCCTTaGACACTTCCATCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: SGDLNGTADACGPQGTETHTLLP*TLPSKR
Trigger: CCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTG...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ATTCTAAGCCCCCTTGCTTCCCCTGAGCCCAGGTATGTCATTCCTACACACACTCCTGGATTCGCAGACTaGGGGCATCACCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: ILSPLASPEPRYVIPTHTPGFAD*GHHHSC
Trigger: GCAGGAGTGGTGATGCCCCAAGTCTGCGAATCCAGG...AGTGTGTGTAGGAATGACATACCTGGGCTCAGGGGAAGCAAGGGGGCTTAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTACATCTATCCTGGCATaGGGGTGGAGGTGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: QERPVGERAIASGTGGHFTSILA*GWRWPD
Trigger: ATCAGGCCACCTCCACCCCAATGCCAGGATAGATGT...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTGGCATCTGGTTGACTTaGCCTGGTTACTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PMPESHLCVKSAPVRESAGIWLT*PGYSQL
Trigger: GAGCTGGGAGTAACCAGGCAAAGTCAACCAGATGCC...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGAGCTAGGCATCTGGTaGACTTTGCCTGGTTACTCC +
Preference number: 5 (lower is better)
Translates to: QQERPVGERAIASGTGGHELGIW*TLPGYS
Trigger: GGAGTAACCAGGCAAAGTCAACCAGATGCCTAGCTC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp GGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTCTCCTCGTTGATTTTCTCTaGGGTGATGCCCTGGTATGC +
Preference number: 5 (lower is better)
Translates to: GLLMPVVPKGRKPQGTVLLVDFL*GDALVC
Trigger: GCATACCAGGGCATCACCCAAGAGAAAATCAACGAG...GAGAACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTACCGCGGCTCATTCATaGGAGGTTGGTCTCCAACTT +
Preference number: 5 (lower is better)
Translates to: QERPVGERAIASGTGGHFTAAHS*EVGLQL
Trigger: AAGTTGGAGACCAACCTCCAATGAATGAGCCGCGGT...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTACCGCGGCTCATTCATaGGAGGTTGGTCTCCAACTT +
Preference number: 5 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVTAAHS*EVGLQL
Trigger: AAGTTGGAGACCAACCTCCAATGAATGAGCCGCGGT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGGAGCTAGGCATCTGGTaGACTTTGCCTGGTTACTCC +
Preference number: 5 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQELGIW*TLPGYS
Trigger: GGAGTAACCAGGCAAAGTCAACCAGATGCCTAGCTC...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTGCTTCCCCAAGCTACTaGCCAGAAACTCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVASPSY*PETHSL
Trigger: CAGACTGTGAGTTTCTGGCAAGTAGCTTGGGGAAGC...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp ATTGGCATCTCATCCATGGATGTCCTTGCACTGAGACTAGCTCCATaGGACACCAATAGCTCTGCCATCTGCATCAGTGTGGCACCCTGG +
Preference number: 5 (lower is better)
Translates to: IGISSMDVLALRLAP*DTNSSAICISVAPW
Trigger: CCAGGGTGCCACACTGATGCAGATGGCAGAGCTATTGGTGTCCCATGGAGCTAGTCTCAGTGCAAGGACATCCATGGATGAGATGCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373331.2
CDS-3UTR CAA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTTATACCGAGGTCCCATaGCTGCTGTACGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVYTEVP*LLYGEV
Trigger: AACTTCACCGTACAGCAGCAATGGGACCTCGGTATA...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAAGCTCCCCAGATTCCAGGAACGAAATaGCCTGGTTTTCCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: WSPTCLSTPRRPTGKAPQIPGTK*PGFPPP
Trigger: TGGAGGGGGAAAACCAGGCAATTTCGTTCCTGGAAT...CTGGGGAGCTTTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACAGGTTGGTCTCCAACTaGTCTCTCAACACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENRLVSN*SLNTQE
Trigger: CTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCT...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TCAGGTGACTTGAATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCCATGCAGCACCTGCTTaGGAAGTGGTCTCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SGDLNGTADACGPQGTETHAAPA*EVVSFN
Trigger: ATTAAAGGAGACCACTTCCAAAGCAGGTGCTGCATG...GGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCATTCAAGTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACCCAACTTTCAGTTGTTaGGGGCATATGATGGTGAGC +
Preference number: 5 (lower is better)
Translates to: QQERPVGERAIASGTGGHPTFSC*GHMMVS
Trigger: GCTCACCATCATATGCCCCAAACAACTGAAAGTTGG...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAACCGCCAACTTTCAGTaGTTTGGGGCATATGATGGT +
Preference number: 5 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGTANFQ*FGAYDG
Trigger: ACCATCATATGCCCCAAACAACTGAAAGTTGGCGGT...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 90 bp AGAGGTGTCCACAGCTCGTTGTCCTTGGCGTTCACATTGGCACCATaGGAGAGGAGCAGCTTCACAATTTCCTCAAAGTTGTCGATGCAG +
Preference number: 5 (lower is better)
Translates to: RGVHSSLSLAFTLAP*ERSSFTISSKLSMQ
Trigger: CTGCATCGACAACTTTGAGGAAATTGTGAAGCTGCTCCTCTCCCATGGTGCCAATGTGAACGCCAAGGACAACGAGCTGTGGACACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299824.6
ENST00000373331.2
ENST00000463749.1
CDS CCA 90 bp ATTGGCATCTCATCCATGGATGTCCTTGCACTGAGACTAGCTCCATaGGACACCAATAGCTCTGCCATCTGCATCTGTCCCCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: IGISSMDVLALRLAP*DTNSSAICICPQKA
Trigger: TGCCTTCTGGGGACAGATGCAGATGGCAGAGCTATTGGTGTCCCATGGAGCTAGTCTCAGTGCAAGGACATCCATGGATGAGATGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS-3UTR CAA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAGCCACCCGCATCTCGTaGATTTTCTCTTGGGTGATG +
Preference number: 5 (lower is better)
Translates to: HWRLVSNLSLNTQETYREATRIS*IFSWVM
Trigger: CATCACCCAAGAGAAAATCAACGAGATGCGGGTGGC...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTGGGCCGCCTCCACCCCTACTCTAGAATACATCTATCCTGGCATTGGGGTGGAATGATCACATCATGCTaGTGTTTTAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LGRLHPYSRIHLSWHWGGMITSC*CFSSSS
Trigger: GCTGCTGGAGCTAAAACACAAGCATGATGTGATCAT...TCCACCCCAATGCCAGGATAGATGTATTCTAGAGTAGGGGTGGAGGCGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATTCCAGGAACGAAATaGCCTGGTTTTCCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENIPGTK*PGFPPP
Trigger: TGGAGGGGGAAAACCAGGCAATTTCGTTCCTGGAAT...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTATGCAGGAGGGGATATaGACCACGTGCACCCTGGAT +
Preference number: 5 (lower is better)
Translates to: PLPHPSAFDTSIQEENMIMQEGI*TTCTLD
Trigger: ATCCAGGGTGCACGTGGTCAATATCCCCTCCTGCAT...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACTTTCCAACTTTCAGTTGTTaGGGGCATATGATGGTGAGC +
Preference number: 5 (lower is better)
Translates to: QERPVGERAIASGTGGHFPTFSC*GHMMVS
Trigger: GCTCACCATCATATGCCCCAAACAACTGAAAGTTGG...AAAGTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTCGAAGGACACTTTCTaGCGGCGGCCGCCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: YLMENSILKSLVALGLEFSKDTF*RRPPVL
Trigger: CAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCGA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCAATGCCTGAGAGTCACCTGTGTGTGAAGTCGGCTCCTGTCAGGGAATCAGCTACAATTTCCTCAAAGTaGTCGATGCAGCACTGGTGT +
Preference number: 5 (lower is better)
Translates to: PMPESHLCVKSAPVRESATISSK*SMQHWC
Trigger: ACACCAGTGCTGCATCGACAACTTTGAGGAAATTGT...AGCTGATTCCCTGACAGGAGCCGACTTCACACACAGGTGACTCTCAGGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAATGTTCCCATCCGAGTaGACAGCAAGCAAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPMFPSE*TASKSA
Trigger: GGCCGACTTGCTTGCTGTCAACTCGGATGGGAACAT...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTATGATCACATCATGCTaGTGTTTTAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVMITSC*CFSSSS
Trigger: GCTGCTGGAGCTAAAACACAAGCATGATGTGATCAT...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCAAAGGGGGTCCTGGGAGACTCAGCAGTGAGGGGAGAACAGCCATTCACAGTCAGAGGAAAACATGATTaGGTTGATTCCAGGAACGAA +
Preference number: 5 (lower is better)
Translates to: PKGVLGDSAVRGEQPFTVRGKHD*VDSRNE
Trigger: TTCGTTCCTGGAATCAACCAAATCATGTTTTCCTCT...GACTGTGAATGGCTGTTCTCCCCTCACTGCTGAGTCTCCCAGGACCCCCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGCACAGCTCGTTGTCCTaGGCGTTCACATTGGCACCA +
Preference number: 5 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTHSSLS*AFTLAP
Trigger: TGGTGCCAATGTGAACGCCAAGGACAACGAGCTGTG...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TGTCTGCCTGGAACCCAAGATCCAGCATCTATACTTGGTGGCAAATGTTATCCATCCTTCCTATACAGGTaGGTCCTGTCCGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: CLPGTQDPASILGGKCYPSFLYR*VLSDRL
Trigger: CAGCCTGTCGGACAGGACCAACCTGTATAGGAAGGA...TGGATAACATTTGCCACCAAGTATAGATGCTGGATCTTGGGTTCCAGGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CATTGGAGGTTGGTCTCCAACTTGTCTCTCAACACCCAGGAGACCTACAGGGAAACCGCCAACTTTCAGTaGTTTGGGGCATATGATGGT +
Preference number: 5 (lower is better)
Translates to: HWRLVSNLSLNTQETYRETANFQ*FGAYDG
Trigger: ACCATCATATGCCCCAAACAACTGAAAGTTGGCGGT...TTCCCTGTAGGTCTCCTGGGTGTTGAGAGACAAGTTGGAGACCAACCTCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAACAGGGGACACACCCTaGTTAGCTTTTCTAAGCCCC +
Preference number: 5 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPTGDTP*LAFLSP
Trigger: GGGGCTTAGAAAAGCTAACAAGGGTGTGTCCCCTGT...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCCCGCACGGTGGCACTaGCAATGCCCATGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGPARWH*QCPWEA
Trigger: TGCTTCCCATGGGCATTGCAAGTGCCACCGTGCGGG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGATTCTGTCACAGGCCTaGGCAGCTGGAAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTILSQA*AAGSNS
Trigger: GGAGTTGCTTCCAGCTGCCAAGGCCTGTGACAGAAT...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGAGGGTCCTTATTCTCTaGGTCTGTCCTGGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTRVLIL*VCPGLP
Trigger: AGGGAGACCAGGACAGACCAAGAGAATAAGGACCCT...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCATCACCTCGTGGGATCTaGGTAGGAAATTCGGAGAGT +
Preference number: 5 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPSPRGI*VGNSES
Trigger: ACTCTCCGAATTTCCTACCAAGATCCCACGAGGTGA...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CAACAAGAGAGACCTGTTGGGGAGAGGGCTATAGCTTCTGGCACAGGGGGTCACGAAAACATGATTTGGTaGATTCCAGGAACGAAATTG +
Preference number: 5 (lower is better)
Translates to: QQERPVGERAIASGTGGHENMIW*IPGTKL
Trigger: CAATTTCGTTCCTGGAATCAACCAAATCATGTTTTC...GTGACCCCCTGTGCCAGAAGCTATAGCCCTCTCCCCAACAGGTCTCTCTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATGATTCTCATTCATTGGAGGTaGGTCTCCAACTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: PLPHPSAFDTSIQEENMILIHWR*VSNLSL
Trigger: GAGAGACAAGTTGGAGACCAACCTCCAATGAATGAG...AATCATGTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CCTACACACACTGATCGAGCTTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTTTTGCCTCAGGTGACTaGAATGGGACTGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: PTHTDRACVCVYMCVCVCFASGD*NGTADA
Trigger: GGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAAA...ACACACACACACACACATATACACACACACACAAGCTCGATCAGTGTGTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp CTTGTCCCCCTCCCACACCCTTCTGCCTTTGACACTTCCATCCAAGAGGAAAACATCCAGCATCTATACTaGGTGGCAAATGTTATCCAG +
Preference number: 5 (lower is better)
Translates to: LVPLPHPSAFDTSIQEENIQHLY*VANVIQ
Trigger: CTGGATAACATTTGCCACCAAGTATAGATGCTGGAT...GTTTTCCTCTTGGATGGAAGTGTCAAAGGCAGAAGGGTGTGGGAGGGGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ATGGGACTGCTGATGCCTGTGGTCCCCAAGGGACGGAAACCACAAGGAACAGTTGAAAACATGATTTGGTaGATTCCAGGAACGAAATTG +
Preference number: 5 (lower is better)
Translates to: MGLLMPVVPKGRKPQGTVENMIW*IPGTKL
Trigger: CAATTTCGTTCCTGGAATCAACCAAATCATGTTTTC...AACTGTTCCTTGTGGTTTCCGTCCCTTGGGGACCACAGGCATCAGCAGTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTATGCAGGAGGGGATATaGACCACGTGCACCCTGGAT +
Preference number: 5 (lower is better)
Translates to: YLMENSILKSLVALGLEFMQEGI*TTCTLD
Trigger: ATCCAGGGTGCACGTGGTCAATATCCCCTCCTGCAT...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTGGCATCTGGTTGACTTaGCCTGGTTACTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGGIWLT*PGYSQL
Trigger: GAGCTGGGAGTAACCAGGCAAAGTCAACCAGATGCC...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTTTGCCTCAGGTGACTaGAATGGGACTGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: YLMENSILKSLVALGLEFFASGD*NGTADA
Trigger: GGCATCAGCAGTCCCATTCAAGTCACCTGAGGCAAA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTGCTTCCCCAAGCTACTaGCCAGAAACTCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: YLMENSILKSLVALGLEFASPSY*PETHSL
Trigger: CAGACTGTGAGTTTCTGGCAAGTAGCTTGGGGAAGC...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTACAGGGGACACACCCTaGTTAGCTTTTCTAAGCCCC +
Preference number: 5 (lower is better)
Translates to: YLMENSILKSLVALGLEFTGDTP*LAFLSP
Trigger: GGGGCTTAGAAAAGCTAACAAGGGTGTGTCCCCTGT...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp ACAAATAAAAGGCGCACAGAGCAAGGGATAACCTGCAGCTTATCGGGTACACCAAGAGGAAAACATGATTaGGTTGATTCCAGGAACGAA +
Preference number: 5 (lower is better)
Translates to: TNKRRTEQGITCSLSGTPRGKHD*VDSRNE
Trigger: TTCGTTCCTGGAATCAACCAAATCATGTTTTCCTCT...TGGTGTACCCGATAAGCTGCAGGTTATCCCTTGCTCTGTGCGCCTTTTATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp AGGAACAGTTCTCCTGACTCTGTCTTATTCCTCCTTTATCCGCAGAACCTAACGAAACCTGAGATGCATTaGGCAGCAAATTGCAGAACA +
Preference number: 5 (lower is better)
Translates to: RNSSPDSVLFLLYPQNLTKPEMH*AANCRT
Trigger: TGTTCTGCAATTTGCTGCCAAATGCATCTCAGGTTT...CGTTAGGTTCTGCGGATAAAGGAGGAATAAGACAGAGTCAGGAGAACTGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TATTTGATGGAGAATTCTATCCTGAAGTCTTTAGTAGCCCTGGGCCTAGAGTTTTCCCAAGGAAAGGCTTaGATGCTGAAGGAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: YLMENSILKSLVALGLEFSQGKA*MLKEAA
Trigger: TGCTGCTTCCTTCAGCATCAAAGCCTTTCCTTGGGA...AAACTCTAGGCCCAGGGCTACTAAAGACTTCAGGATAGAATTCTCCATCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTCTCATTCATTGGAGGTaGGTCTCCAACTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGLIHWR*VSNLSL
Trigger: GAGAGACAAGTTGGAGACCAACCTCCAATGAATGAG...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS-3UTR CAA 90 bp TCAGTAAATTACGTGAGTGAATTAATGAATGACCGCGGCTCATTCATTGGAGGTATCCAGCATCTATACTaGGTGGCAAATGTTATCCAG +
Preference number: 5 (lower is better)
Translates to: SVNYVSELMNDRGSFIGGIQHLY*VANVIQ
Trigger: CTGGATAACATTTGCCACCAAGTATAGATGCTGGAT...ACCTCCAATGAATGAGCCGCGGTCATTCATTAATTCACTCACGTAATTTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp GCTGCAGCTCCGTCAGCAGGTCCACGTGACTGGCCATaGCCACCGCCCTCCCCAACGCCCTGGCTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: AAAPSAGPRDWP*PPPSPTPWLGA
Trigger: AGCCCCCAGCCAGGGCGTTGGGGAGGGCGGTGGCCATGGCCAGTCACGTGGACCTGCTGACGGAGCTGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp CCAGCAGCTGCAGCTCCGTCAGCAGGTCCACGTGACTaGCCATGGCCACCGCCCTCCCCAACGCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: PAAAAPSAGPRD*PWPPPSPTPWL
Trigger: CAGCCAGGGCGTTGGGGAGGGCGGTGGCCATGGCCAGTCACGTGGACCTGCTGACGGAGCTGCAGCTGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp CGTCGTTCCTCAGCGAGGCCTCCAGCAGGGCCACGCTaGCCTCGAAGGACACTTTCTTGCGGCGGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: RRSSARPPAGPR*PRRTLSCGGRP
Trigger: CGGGCGGCCGCCGCAAGAAAGTGTCCTTCGAGGCCAGCGTGGCCCTGCTGGAGGCCTCGCTGAGGAACGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp TGTGCCCATTTCTTCAGCTGCTGGGCCCGGCGCTTCTaGGCAGCCCGCAGCCGCTCCAGCGTGGGCACCTTC +
Preference number: 6 (lower is better)
Translates to: CAHFFSCWARRF*AARSRSSVGTF
Trigger: GAAGGTGCCCACGCTGGAGCGGCTGCGGGCTGCCCAGAAGCGCCGGGCCCAGCAGCTGAAGAAATGGGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp TGCTCCAGGGCGGGGTGGCGTCGGCCACGCCAGGGTTaGCATAGGCCATGCTGTAGTCAGGCACCTCATGCA +
Preference number: 6 (lower is better)
Translates to: CSRAGWRRPRQG*HRPCCSQAPHA
Trigger: TGCATGAGGTGCCTGACTACAGCATGGCCTATGGCAACCCTGGCGTGGCCGACGCCACCCCGCCCTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp TTCTTGCGGCGGCCGCCCGTGCTGCGCTTCCGCTCATaGTTTCGCTTGCGGTGCTGCAAGTCCTGCTCGTAC +
Preference number: 6 (lower is better)
Translates to: FLRRPPVLRFRS*FRLRCCKSCSY
Trigger: GTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp CCTCGAAGGACACTTTCTTGCGGCGGCCGCCCGTGCTaGGCTTCCGCTCATGCTTTCGCTTGCGGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: PRRTLSCGGRPC*ASAHAFACGAA
Trigger: TGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp TGGCCTCGAAGGACACTTTCTTGCGGCGGCCGCCCGTaGTGCGCTTCCGCTCATGCTTTCGCTTGCGGTGCT +
Preference number: 6 (lower is better)
Translates to: WPRRTLSCGGRP*CASAHAFACGA
Trigger: AGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGAAAGTGTCCTTCGAGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CAA 72 bp CGGCCGCCCGTGCTGCGCTTCCGCTCATGCTTTCGCTaGCGGTGCTGCAAGTCCTGCTCGTACTGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: RPPVLRFRSCFR*RCCKSCSYCAH
Trigger: ATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp GGCCGCCCGTGCTGCGCTTCCGCTCATGCTTTCGCTTaGGGTGCTGCAAGTCCTGCTCGTACTGTGCCCATT +
Preference number: 6 (lower is better)
Translates to: GRPCCASAHAFA*GAASPARTVPI
Trigger: AATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp CCATTGGCTCCAGCTATGTGCAGCAGTGTGGCACCCTaGGCATCTATCCAGTCCAGGTCCTGGCCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: PLAPAMCSSVAP*ASIQSRSWPAA
Trigger: CGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCAGGGTGCCACACTGCTGCACATAGCTGGAGCCAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS CAA 90 bp TTCTTGCGGCGGCCGCCCGTGCTGCGCTTCCGCTCATGCTTTCGCTaGCGGTGCTGCAAGTCCTGCTCGTACTGTGCCCATTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: FLRRPPVLRFRSCFR*RCCKSCSYCAHFFS
Trigger: GCTGAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGGCGGCCGCCGCAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CAA 90 bp CCATTGCTGCTGTACGGTGAAGTTCTGCCTCCGATCAAGGGGGCCTaGCCTTCACTGCTACTCTCGCCCGTCCTGGCCATGCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PLLLYGEVLPPIKGA*PSLLLSPVLAMLLP
Trigger: GGGCAGCAGCATGGCCAGGACGGGCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACAGCAGCAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp GTCCCCGTTGTAGGTGGAGGTCCGCTGATCCTCAGCTaGACTCCGCTGCCACAGGATGGCCTCTCCCTCATA +
Preference number: 6 (lower is better)
Translates to: VPVVGGGPLILS*TPLPQDGLSLI
Trigger: TATGAGGGAGAGGCCATCCTGTGGCAGCGGAGTGCAGCTGAGGATCAGCGGACCTCCACCTACAACGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp GGGTGGCGTCGGCCACGCCAGGGTTGCCATAGGCCATaGTGTAGTCAGGCACCTCATGCACCTTCCAGACAT +
Preference number: 6 (lower is better)
Translates to: GWRRPRQGCHRP*CSQAPHAPSRH
Trigger: ATGTCTGGAAGGTGCATGAGGTGCCTGACTACAGCATGGCCTATGGCAACCCTGGCGTGGCCGACGCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp AAGTTCTGCCTCCGATCAAGGGGGCCTTGCCTTCACTaGTACTCTCGCCCGTCCTGGCCATGCTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: KFCLRSRGPCLH*YSRPSWPCCCP
Trigger: TGGGCAGCAGCATGGCCAGGACGGGCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS TCA 72 bp AGACATCCCCGTTGGCCAGCGCATACTGGTAGGCACTaGCCGGAGCCCGGAGGCCATTCTCAACAGGCATGT +
Preference number: 6 (lower is better)
Translates to: RHPRWPAHTGRH*PEPGGHSQQAC
Trigger: ACATGCCTGTTGAGAATGGCCTCCGGGCTCCGGTCAGTGCCTACCAGTATGCGCTGGCCAACGGGGATGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp CTTTCGCTTGCGGTGCTGCAAGTCCTGCTCGTACTGTaGCCATTTCTTCAGCTGCTGGGCCCGGCGCTTCTG +
Preference number: 6 (lower is better)
Translates to: LSLAVLQVLLVL*PFLQLLGPALL
Trigger: CAGAAGCGCCGGGCCCAGCAGCTGAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp TGTACGGTGAAGTTCTGCCTCCGATCAAGGGGGCCTTaGCTTCACTGCTACTCTCGCCCGTCCTGGCCATGC +
Preference number: 6 (lower is better)
Translates to: CTVKFCLRSRGP*LHCYSRPSWPC
Trigger: GCATGGCCAGGACGGGCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp ATCCAGTCCAGGTCCTGGCCCGCTGCGATCATGCAGTaGATGTCCGCAATCATCTGCTGCTCAGGAGCCACC +
Preference number: 6 (lower is better)
Translates to: IQSRSWPAAIMQ*MSAIICCSGAT
Trigger: GGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp AGTGTGGCACCCTGGGCATCTATCCAGTCCAGGTCCTaGCCCGCTGCGATCATGCAGTGGATGTCCGCAATC +
Preference number: 6 (lower is better)
Translates to: SVAPWASIQSRS*PAAIMQWMSAI
Trigger: GATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCAGGGTGCCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp CAGCCATCCCAGTCCTTCACATCCACACGCACTCCATaGTCCAGGAGGAGCTCAGCTGCCCGCAGGTATCCA +
Preference number: 6 (lower is better)
Translates to: QPSQSFTSTRTP*SRRSSAARRYP
Trigger: TGGATACCTGCGGGCAGCTGAGCTCCTCCTGGACCATGGAGTGCGTGTGGATGTGAAGGACTGGGATGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS CCA 72 bp ACCAATAGCTCTGCCATCTGCATCAGTGTGGCACCCTaGGCATCTATCCAGTCCAGGTCCTGGCCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: TNSSAICISVAP*ASIQSRSWPAA
Trigger: CGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCAGGGTGCCACACTGATGCAGATGGCAGAGCTATTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373331.2
CDS CAA 72 bp CTGTACGGTGAAGTTCTGCCTCCGATCAAGGGGGCCTaGCCTTCACTGCTACTCTCGCCCGTCCTGGCCATG +
Preference number: 6 (lower is better)
Translates to: LYGEVLPPIKGA*PSLLLSPVLAM
Trigger: CATGGCCAGGACGGGCGAGAGTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp CCCGTGCTGCGCTTCCGCTCATGCTTTCGCTTGCGGTaGTGCAAGTCCTGCTCGTACTGTGCCCATTTCTTC +
Preference number: 6 (lower is better)
Translates to: PVLRFRSCFRLR*CKSCSYCAHFF
Trigger: GAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp ACCCTGGGCATCTATCCAGTCCAGGTCCTGGCCCGCTaGGATCATGCAGTGGATGTCCGCAATCATCTGCTG +
Preference number: 6 (lower is better)
Translates to: TLGIYPVQVLAR*DHAVDVRNHLL
Trigger: CAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGATAGATGCCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp ATCCACACGCACTCCATGGTCCAGGAGGAGCTCAGCTaGCCGCAGGTATCCATTGGCTCCAGCTATGTGCAG +
Preference number: 6 (lower is better)
Translates to: IHTHSMVQEELS*PQVSIGSSYVQ
Trigger: CTGCACATAGCTGGAGCCAATGGATACCTGCGGGCAGCTGAGCTCCTCCTGGACCATGGAGTGCGTGTGGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS CAA 90 bp CGGAGGCCATTCTCAACAGGCATGTCCAGTTCACCTCGTGGGATCTaGGTAGGAAATTCGGAGAGTAGCACGGGCTTCTCCAGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: RRPFSTGMSSSPRGI*VGNSESSTGFSSLG
Trigger: CCCCAGGCTGGAGAAGCCCGTGCTACTCTCCGAATTTCCTACCAAGATCCCACGAGGTGAACTGGACATGCCTGTTGAGAATGGCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp TTCCGCTCATGCTTTCGCTTGCGGTGCTGCAAGTCCTaGTCGTACTGTGCCCATTTCTTCAGCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: FRSCFRLRCCKS*SYCAHFFSCWA
Trigger: GGCCCAGCAGCTGAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp GTGCTGCGCTTCCGCTCATGCTTTCGCTTGCGGTGCTaGAAGTCCTGCTCGTACTGTGCCCATTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: VLRFRSCFRLRC*KSCSYCAHFFS
Trigger: GCTGAAGAAATGGGCACAGTACGAGCAGGACTTGCAGCACCGCAAGCGAAAGCATGAGCGGAAGCGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp CATCTATCCAGTCCAGGTCCTGGCCCGCTGCGATCATaGAGTGGATGTCCGCAATCATCTGCTGCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: HLSSPGPGPLRS*SGCPQSSAAQE
Trigger: CTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGGCCAGGACCTGGACTGGATAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp CCCGCTGCGATCATGCAGTGGATGTCCGCAATCATCTaGTGCTCAGGAGCCACCCGCATCTCGTTGATTTTC +
Preference number: 6 (lower is better)
Translates to: PAAIMQWMSAII*CSGATRISLIF
Trigger: GAAAATCAACGAGATGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp ATACCGAGGTCCCATTGCTGCTGTACGGTGAAGTTCTaGCTCCGATCAAGGGGGCCTTGCCTTCACTGCTAC +
Preference number: 6 (lower is better)
Translates to: IPRSHCCCTVKF*LRSRGPCLHCY
Trigger: GTAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACAGCAGCAATGGGACCTCGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CAA 72 bp GGGCTTCTCCAGCCTGGGGTTAGGGTCCTTATTCTCTaGGTCTGTCCTGGTCTCCCTGATGTCCCCGTTGTA +
Preference number: 6 (lower is better)
Translates to: GLLQPGVRVLIL*VCPGLPDVPVV
Trigger: TACAACGGGGACATCAGGGAGACCAGGACAGACCAAGAGAATAAGGACCCTAACCCCAGGCTGGAGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CAA 90 bp TGGATGTCCGCAATCATCTGCTGCTCAGGAGCCACCCGCATCTCGTaGATTTTCTCTTGGGTGATGCCCTGGTATGCCATGCAGGTCTCG +
Preference number: 6 (lower is better)
Translates to: WMSAIICCSGATRIS*IFSWVMPWYAMQVS
Trigger: CGAGACCTGCATGGCATACCAGGGCATCACCCAAGAGAAAATCAACGAGATGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS TCA 72 bp CGTGTAATATACCGAGGTCCCATTGCTGCTGTACGGTaGAGTTCTGCCTCCGATCAAGGGGGCCTTGCCTTC +
Preference number: 6 (lower is better)
Translates to: RVIYRGPIAAVR*SSASDQGGLAF
Trigger: GAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCACCGTACAGCAGCAATGGGACCTCGGTATATTACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS GCA 72 bp GCTGCGATCATGCAGTGGATGTCCGCAATCATCTGCTaGTCAGGAGCCACCCGCATCTCGTTGATTTTCTCT +
Preference number: 6 (lower is better)
Translates to: AAIMQWMSAIIC*SGATRISLIFS
Trigger: AGAGAAAATCAACGAGATGCGGGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCATGATCGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp GACATCCAGGGTGGGTTCATCCTCGCAGAGGTCATATaGCATGTTCCCATCCGAGTTGACAGCAAGCAAGTC +
Preference number: 6 (lower is better)
Translates to: DIQGGFILAEVI*HVPIRVDSKQV
Trigger: GACTTGCTTGCTGTCAACTCGGATGGGAACATGCCATATGACCTCTGCGAGGATGAACCCACCCTGGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CAA 72 bp GCAATCATCTGCTGCTCAGGAGCCACCCGCATCTCGTaGATTTTCTCTTGGGTGATGCCCTGGTATGCCATG +
Preference number: 6 (lower is better)
Translates to: AIICCSGATRIS*IFSWVMPWYAM
Trigger: CATGGCATACCAGGGCATCACCCAAGAGAAAATCAACGAGATGCGGGTGGCTCCTGAGCAGCAGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp TCATCCATGGATGTCCTTGCACTGAGACTAGCTCCATaGGACACCAATAGCTCTGCCATCTGCATCTGTCCC +
Preference number: 6 (lower is better)
Translates to: SSMDVLALRLAP*DTNSSAICICP
Trigger: GGGACAGATGCAGATGGCAGAGCTATTGGTGTCCCATGGAGCTAGTCTCAGTGCAAGGACATCCATGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299824.6
CDS CAA 72 bp TTCTCAACAGGCATGTCCAGTTCACCTCGTGGGATCTaGGTAGGAAATTCGGAGAGTAGCACGGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FSTGMSSSPRGI*VGNSESSTGFS
Trigger: GGAGAAGCCCGTGCTACTCTCCGAATTTCCTACCAAGATCCCACGAGGTGAACTGGACATGCCTGTTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299824.6
ENST00000373331.2
CDS CCA 72 bp CACAGCTCGTTGTCCTTGGCGTTCACATTGGCACCATaGGAGAGGAGCAGCTTCACAATTTCCTCAAAGTTG +
Preference number: 6 (lower is better)
Translates to: HSSLSLAFTLAP*ERSSFTISSKL
Trigger: CAACTTTGAGGAAATTGTGAAGCTGCTCCTCTCCCATGGTGCCAATGTGAACGCCAAGGACAACGAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299824.6
ENST00000373331.2
ENST00000463749.1
CDS CCA 72 bp TCATCCATGGATGTCCTTGCACTGAGACTAGCTCCATaGGACACCAATAGCTCTGCCATCTGCATCAGTGTG +
Preference number: 6 (lower is better)
Translates to: SSMDVLALRLAP*DTNSSAICISV
Trigger: CACACTGATGCAGATGGCAGAGCTATTGGTGTCCCATGGAGCTAGTCTCAGTGCAAGGACATCCATGGATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373331.2