RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R16A (Homo sapiens)

Ensembl gene IDs: ENSG00000160972

Ensembl transcript IDs: ENST00000292539.8, ENST00000435887.1, ENST00000435887.2, ENST00000526183.5, ENST00000526564.1, ENST00000526643.1, ENST00000528430.2, ENST00000529009.1, ENST00000529283.5, ENST00000532806.1, ENST00000533088.1, ENST00000533829.1

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTaGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATG +
Preference number: 1 (lower is better)
Translates to: SRGFRAAPAAPGHAP*GGSLGLCPRQGPCM
Trigger: CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292539.8
ENST00000435887.1
3UTR-3UTR GCA 90 bp AGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTaGCCGCGACAGGGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: RSRGFRAAPAAPGHAPWGGSLGL*PRQGPC
Trigger: GCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCC...TCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292539.8
ENST00000435887.1
3UTR CCA 72 bp CGCAGCACCAGGGCACGCACCGTGGGGAGGCAGCCTTaGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAG +
Preference number: 3 (lower is better)
Translates to: RSTRARTVGRQP*AVPATGPLHAE
Trigger: CTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGTGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292539.8
ENST00000435887.1
CDS-3UTR TCA 90 bp ACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCCCAGGGCCCAGGGGTaGGGCTCTCTAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TRARTVGRQPWAVPATGPPRAQG*GSLGSQ
Trigger: CTGGCTGCCTAGAGAGCCTCACCCCTGGGCCCTGGG...GGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGT
74% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGCGGCTCCGGGCTGGTaGGCGGCGGCTGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEAAAPGW*AAAVAT
Trigger: TGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGC...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp ACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTCGGGCCCCTCAGGTaGGGGTCGCTGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TRARTVGRQPWAVPATGPLGPLR*GSLQLG
Trigger: GCCAAGCTGCAGCGACCCCCACCTGAGGGGCCCGAG...GGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp CACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCGTGGGGAGGCAGCCTTaGGCTGTGCCCGCGACAGGG +
Preference number: 4 (lower is better)
Translates to: HQGTHRGEAALGCARDRAVGRQP*AVPATG
Trigger: CCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCAC...GGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCGCTTGCCCACAGGGCTaGTCGGGGCACCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HQGTHRGEAALGCARDRAACPQG*SGHQSG
Trigger: CCCACTCTGGTGCCCCGAGCAGCCCTGTGGGCAAGC...GGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATCTCGGGGCACCAGAGTaGGGAGCTTGGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARTVGRQPWAVPATGPLHLGAPE*GAWGPG
Trigger: GCCTGGCCCCCAAGCTCCCCACTCTGGTGCCCCGAG...ATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp CACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCCAGGTGCTCGGCCATaGCGGCGGCTGCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: HAPWGGSLGLCPRQGPCMPGARP*RRLLAH
Trigger: GTGGGCAAGCAGCCGCCGCCATGGCCGAGCACCTGG...CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCGCCCACATCTTCACCTaGTGGGCGCGCCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HQGTHRGEAALGCARDRAAHIFT*WARRFW
Trigger: CCAGAAGCGGCGCGCCCAGCAGGTGAAGATGTGGGC...GGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGGAGCCCTTGGCTGGCTaGCTCCTTCCGGGGACGCTC +
Preference number: 4 (lower is better)
Translates to: HAPWGGSLGLCPRQGPCMEPLAG*LLPGTL
Trigger: GAGCGTCCCCGGAAGGAGGCAGCCAGCCAAGGGCTC...CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGGGGGCATGGAGGTCTaGCCCGGCCTGCAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VEAGVSVLHPQHQGTHRGGGMEV*PGLQPA
Trigger: AGCCGGCTGCAGGCCGGGGCAGACCTCCATGCCCCC...CCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTAC
72% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGAACCCGTTGGCGGCTaGGACGTGCAGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEAEPVGG*DVQQRG
Trigger: GCCACGCTGCTGCACGTCGCAGCCGCCAACGGGTTC...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGGTGGGCGGCGGCTGTTaGCACACGATGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HAPWGGSLGLCPRQGPCMVGGGC*HTMASW
Trigger: CCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCAC...CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp AGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCCGCGACAGGGCCCCTaGATGCTGAGCAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: RARTVGRQPWAVPATGPLPRQGP*MLSNSL
Trigger: GAGGCTGTTGCTCAGCATGCAGGGGCCCTGTCGCGG...CAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGCCCGGGGTTTCCGTGCTaGACCCGCAGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PWGGSLGLCPRQGPCMLSPGFPC*TRSTRA
Trigger: TGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGG...GCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp ACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGGGCAGCCCCGAGACCTaGCCGGCCTCAGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TVGRQPWAVPATGPLHAEGSPET*PASVQG
Trigger: ACCCTGCACTGAGGCCGGCCAGGTCTCGGGGCTGCC...CTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATCCTGGGCGTGCTGCTTaGGGTACAGGTCGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: ARTVGRQPWAVPATGPLHPGRAA*GTGRCA
Trigger: AGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGG...ATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp AGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCGCCTCCTGGGCGTGCTaGTTGCGGTACAGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SRGFRAAPAAPGHAPWGGASWAC*LRYRSV
Trigger: CACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGC...GCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp AAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGGGGTGGGTCCCCGCCTaGCCTGAAGCCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: KPGFPCCTRSTRARTVGRGWVPA*PEATVR
Trigger: CCTGACTGTGGCTTCAGGGCAGGCGGGGACCCACCC...CCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGCAGGGAGGGCAGTGTaGGAGGGCACCCCAAACCTG +
Preference number: 4 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEAAGRAV*EGTPNL
Trigger: CAGGTTTGGGGTGCCCTCCCACACTGCCCTCCCTGC...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp CACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGGGCCATTGTGCGGCCTaGCCACTTCGGGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: HAPWGGSLGLCPRQGPCMGHCAA*PLRGCP
Trigger: AGGACAACCCCGAAGTGGTCAGGCCGCACAATGGCC...CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCGGAGGGAAGAGGACCTaGTTCAGGAGCCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HQGTHRGEAALGCARDRAGGKRT*FRSPWL
Trigger: CAGCCAAGGGCTCCTGAAGCAGGTCCTCTTCCCTCC...GGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCATCAATGCAGCACTGGTaGAGGGCCGTCAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEASMQHW*RAVRPS
Trigger: GGACGGCCTGACGGCCCTGCACCAGTGCTGCATTGA...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp AGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCCGCAGGAGGGCGTCGTaGTTGTGCTTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRGFRAAPAAPGHAPWGGRRRAS*LCFSSS
Trigger: GCTGGAGCTGAAGCACAAGCACGACGCCCTCCTGCG...GCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATTGCGGTACAGGTCGGTaGGCTGGGTTAGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: ARTVGRQPWAVPATGPLHCGTGR*AGLGSP
Trigger: GGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCA...ATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATATGGCCTCCTGGGCGTaGTGCTTGCGGTACAGGTCG +
Preference number: 4 (lower is better)
Translates to: ARTVGRQPWAVPATGPLHMASWA*CLRYRS
Trigger: CGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCAT...ATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGCCCTACTCGGCCATTGTaGGGCCTGACCACTTCGGGG +
Preference number: 4 (lower is better)
Translates to: PWGGSLGLCPRQGPCMLSPTRPL*GLTTSG
Trigger: CCCCGAAGTGGTCAGGCCGCACAATGGCCGAGTAGG...GCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGTCAGGTGGGGGTCGCTaGAGCTTGGCAGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: TVGRQPWAVPATGPLHAESGGGR*SLAAAR
Trigger: GCGAGCTGCTGCCAAGCTGCAGCGACCCCCACCTGA...CTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGCAGCCTTGGGCTGTaGCCGCGACAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TVEAGVSVLHPQHQGTHRGSLGL*PRQGPC
Trigger: GCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCC...ACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGAAGCCGGGGTTTCCGTaGTGCACCCGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: TVGRQPWAVPATGPLHAEKPGFP*CTRSTR
Trigger: CCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTT...CTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp ACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCAGGGTGCACAACCTATaGGAGGCAGCCCCGAGACCT +
Preference number: 4 (lower is better)
Translates to: TRARTVGRQPWAVPATGPRVHNL*EAAPRP
Trigger: AGGTCTCGGGGCTGCCTCCCATAGGTTGTGCACCCT...GGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp AGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCCTTCGTGCCCTTGGCTaGGTCAGGAGGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: SRGFRAAPAAPGHAPWGGLRALG*VRRPHT
Trigger: TGTGTGGGGCCTCCTGACCCAGCCAAGGGCACGAAG...GCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCACACACGATGGCCTCCTaGGCGTGCTGCTTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEAHTMAS*ACCLRY
Trigger: GTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTG...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp CCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGGCTGTTGCCACACGATaGCCTCCTGGGCGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGFPCCTRSTRARTVGRQAVATR*PPGRAA
Trigger: AGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGC...CTGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp CCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGCAGGTCAGCCAGGGTGTaGTGGGCCTTGTCGTGGACC +
Preference number: 4 (lower is better)
Translates to: PWGGSLGLCPRQGPCMLSRSARV*WALSWT
Trigger: GGTCCACGACAAGGCCCACCACACCCTGGCTGACCT...GCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp GGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGCAACAGCTGGCGCCACTGGCGATaGGCAGCTCCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GGSLGLCPRQGPCMLSNSWRHWR*AAPPGA
Trigger: TGCACCTGGTGGAGCTGCTCATCGCCAGTGGCGCCA...GCTGTTGCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp ACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGTGTTCCCGTCGGTGTTaGCCGCCAGGAGATTGGCGC +
Preference number: 4 (lower is better)
Translates to: TVGRQPWAVPATGPLHAECSRRC*PPGDWR
Trigger: GCGCCAATCTCCTGGCGGTCAACACCGACGGGAACA...CTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGCCTCTCGGGGTCAGGGTaGACAACCTATGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PWGGSLGLCPRQGPCMLSLSGSG*TTYGRQ
Trigger: CTGCCTCCCATAGGTTGTGCACCCTGACCCCGAGAG...GCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCACACCATGGGCATCTCTaGCAGCAGCTCCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEAHHGHL*QQLQVL
Trigger: GAGCACCTGGAGCTGCTGGCAGAGATGCCCATGGTG...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp TCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGGGTCCCCGCCTGCCCTaGAGCCACAGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCTVEAGVSVLHPQHQGTGPRLP*SHSQAG
Trigger: CCCAGCCTGACTGTGGCTTCAGGGCAGGCGGGGACC...CGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp AAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCCCCTCCCAGCTGTGTaGCGAGGTCAGTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: KPGFPCCTRSTRARTVGRPLPAV*RGQCIS
Trigger: ACTGATGCACTGACCTCGGCACACAGCTGGGAGGGG...CCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp CACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCCTGTGTGCTCATCCTaGCCACCATGGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: HAPWGGSLGLCPRQGPCMPVCSS*PPWASL
Trigger: CAGAGATGCCCATGGTGGGCAGGATGAGCACACAGG...CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp TCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGAGGTCTGCCCCGGCCTaGAGCCGGCTCCGGATGTCG +
Preference number: 4 (lower is better)
Translates to: SCTVEAGVSVLHPQHQGTRSAPA*SRLRMS
Trigger: CGACATCCGGAGCCGGCTGCAGGCCGGGGCAGACCT...CGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp TACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTTCAGGTCGGCCCCGTaGGCCACGAGCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: YSRSRGFRAAPAAPGHAPFRSAP*ATSSST
Trigger: GGTGGAGCTGCTCGTGGCGCACGGGGCCGACCTGAA...CGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp TACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGCGCGCCGCTTCTaGGCATGCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: YSRSRGFRAAPAAPGHAPWARRF*ACFSRS
Trigger: GGAGCGGCTGAAGCATGCCCAGAAGCGGCGCGCCCA...CGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGTGCCACGGTCGGCCATaGCAGTCTCCAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VEAGVSVLHPQHQGTHRGCHGRP*QSPGSP
Trigger: TGGACTGCCTGGAGACTGCCATGGCCGACCGTGGCA...CCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGCATGCGCAGTTCTaGCACGGCCCGGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GPVSCTVEAGVSVLHPQHQHAQF*HGPGGL
Trigger: GAGGCCGCCCGGGCCGTGCCAGAACTGCGCATGCTG...GTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGACACTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp AGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCTCCCAGCCGTCTTaGTCCTTAGCGCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSRGFRAAPAAPGHAPWGGSQPS*SLALRL
Trigger: CAGCCTGAGCGCTAAGGACCAAGACGGCTGGGAGCC...TCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTCACCTGCTCGACCCCTaGCACCAACCCACAGCGGTG +
Preference number: 4 (lower is better)
Translates to: TVEAGVSVLHPQHQGTHRHLLDP*HQPTAV
Trigger: CACCGCTGTGGGTTGGTGGCAGGGGTCGAGCAGGTG...ACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp AAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCCAGCCTCCAGGAGCTaGTGCACCATCTCTCGGAAA +
Preference number: 4 (lower is better)
Translates to: KPGFPCCTRSTRARTVGRPASRS*CTISRK
Trigger: TTTCCGAGAGATGGTGCAGCAGCTCCTGGAGGCTGG...CCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACAGAGTCCTGGAGTCCTaGCCCCAGGGCCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GPVSCTVEAGVSVLHPQHRVLES*PQGPGV
Trigger: CACCCCTGGGCCCTGGGGCCAGGACTCCAGGACTCT...GTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGACACTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp CACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCCACTCCCAAGGAACTaGCGGACTTCTTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HAPWGGSLGLCPRQGPCMPLPRN*RTSSRS
Trigger: TGACCTGGAAGAAGTCCGCCAGTTCCTTGGGAGTGG...CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp ACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTAGCAACAGCCTCACATaGGCAGGCAGCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVEAGVSVLHPQHQGTHRSNSLT*AGSTAS
Trigger: GGAGGCCGTGCTGCCTGCTCATGTGAGGCTGTTGCT...ACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGTGCCTGATGGCACCTaGTCGACCCCTGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: TVEAGVSVLHPQHQGTHRVPDGT*STPATN
Trigger: GTTGGTGGCAGGGGTCGAGCAGGTGCCATCAGGCAC...ACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp TACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGCGCCGCTTCTGGGCATaGTTCAGCCGCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: YSRSRGFRAAPAAPGHAPRRFWA*FSRSCV
Trigger: CACACAGGAGCGGCTGAAGCATGCCCAGAAGCGGCG...CGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATAGGCAGTCCAGCGTCTaGTCATCATCACACAGGTCA +
Preference number: 4 (lower is better)
Translates to: ARTVGRQPWAVPATGPLHRQSSV*SSSHRS
Trigger: TGACCTGTGTGATGATGAGCAGACGCTGGACTGCCT...ATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp TACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGGGATGTCGTCCAGCATaGGCAGTTCTGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: YSRSRGFRAAPAAPGHAPGCRPA*AVLARP
Trigger: GGGCCGTGCCAGAACTGCGCATGCTGGACGACATCC...CGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp TCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGGCCTCGATGCTGTCCTaGGTGATGCCACGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SCTVEAGVSVLHPQHQGTASMLS*VMPRSA
Trigger: GGCCGACCGTGGCATCACCCAGGACAGCATCGAGGC...CGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp TACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTACAGGTCGGTGCGCTaGGTTAGGCTCACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: YSRSRGFRAAPAAPGHAPYRSVR*VRLTRL
Trigger: GAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTA...CGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTGGTGGGGCAGCTAGCTaGACTGGCACCCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GMSSDLRGASVLYSRSRGGGAAS*TGTLGG
Trigger: GCCCCCGAGGGTGCCAGTCCAGCTAGCTGCCCCACC...ACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp ACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTAAGCCACAGTCAGGCTaGGGGGTCACCGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: TVEAGVSVLHPQHQGTHRKPQSG*GVTVSP
Trigger: TGGTGACACGGTGACCCCCCAGCCTGACTGTGGCTT...ACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCGGGCAGCCGCCTCGCTaGACCCGTTGGCGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFGQPPR*TRWRLR
Trigger: TCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCC...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp ACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTTCCAGGCATGTCTTCTaGCCTGAGAGGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TVEAGVSVLHPQHQGTHRSRHVF*PERGQC
Trigger: ACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGGA...ACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GACATCCCTCCAGGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTGGCCATGGCGGCGGCTaGTTGCCCACAGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DIPPGMSSDLRGASVLYSGHGGG*LPTGLL
Trigger: GAGCAGCCCTGTGGGCAAGCAGCCGCCGCCATGGCC...ACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGGATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCTGCCGGCGCTGGAGGTaGGGCGGCGCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFCRRWR*GGAARS
Trigger: GCTCCTTGCTGCGCCGCCGCACCTCCAGCGCCGGCA...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCGCCAGCAGCTCCAGGTaGTCGGCCATGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFASSSR*SAMAAA
Trigger: AGCCGCCGCCATGGCCGAGCACCTGGAGCTGCTGGC...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACAGGGCGTCGTGCTTGTaGTTCAGCTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GPVSCTVEAGVSVLHPQHRASCL*FSSSSL
Trigger: CAAGCTGCTGGAGCTGAAGCACAAGCACGACGCCCT...GTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGACACTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACGCCTCCAGGAGCTGCTaGACCATCTCTCGGAAATCA +
Preference number: 4 (lower is better)
Translates to: GPVSCTVEAGVSVLHPQHASRSC*TISRKS
Trigger: TGATTTCCGAGAGATGGTGCAGCAGCTCCTGGAGGC...GTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGACACTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCCGGCGGCCTGAGCTCTaGGCCTGTCTGGCGGTCATC +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFRRPEL*ACLAVI
Trigger: GATGACCGCCAGACAGGCGCAGAGCTCAGGCCGCCG...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp ACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTTCCGGTCTAGTCGCTTaGAGTATAGATGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: TVEAGVSVLHPQHQGTHRSGLVA*SIDAAL
Trigger: CAGTGCGGCATCTATACTCCAAGCGACTAGACCGGA...ACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GACATCCCTCCAGGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTTCGTGGACCAGGGTGTaGGGGGTGGTGCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DIPPGMSSDLRGASVLYSSWTRV*GVVLSR
Trigger: CCTGGACAGCACCACCCCCCACACCCTGGTCCACGA...ACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGGATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTCAGCCAGGGTGTGGTaGGCCTTGTCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GMSSDLRGASVLYSRSRGSARVW*ALSWTR
Trigger: CCTGGTCCACGACAAGGCCCACCACACCCTGGCTGA...ACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTGGCAGCAGCTCGCTaGCGCTTCAGGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GMSSDLRGASVLYSRSRGLAAAR*RFRSAR
Trigger: CCTGGCTGACCTGAAGCGCCAGCGAGCTGCTGCCAA...ACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCGGGGTCGCTGCAGCTTaGCAGCAGCTCGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFGVAAA*QQLAGA
Trigger: AGCGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCC...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTGTCCATCAGGGACTTTaGGTTCAGGTCGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: GMSSDLRGASVLYSRSRGVHQGL*VQVGPV
Trigger: CACGGGGCCGACCTGAACGCAAAGTCCCTGATGGAC...ACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GACATCCCTCCAGGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAGCTTCGTGCCCTTaGCTGGGTCAGGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DIPPGMSSDLRGASVLYSRASCP*LGQEAP
Trigger: TGGGGCCTCCTGACCCAGCCAAGGGCACGAAGCTCT...ACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTCATCAATGCAGCACTaGTGCAGGGCCGTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GMSSDLRGASVLYSRSRGSSMQH*CRAVRP
Trigger: CGGCCTGACGGCCCTGCACCAGTGCTGCATTGATGA...ACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp TCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGAGCTGCTCACACCTTTaGAGACTCCACCGTTCATGT +
Preference number: 4 (lower is better)
Translates to: SCTVEAGVSVLHPQHQGTSCSHL*RLHRSC
Trigger: ACATGAACGGTGGAGTCTTCAAAGGTGTGAGCAGCT...CGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp GACATCCCTCCAGGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTGCCTCCTTCTCAGCCTaGGCCCACATCTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: DIPPGMSSDLRGASVLYSASFSA*AHIFTC
Trigger: GCAGGTGAAGATGTGGGCCCAGGCTGAGAAGGAGGC...ACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGGATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp GGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTACTCCACCGTTCATGTaGCTGATGGCACCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: GMSSDLRGASVLYSRSRGTPPFM*LMAPAR
Trigger: TCGAGCAGGTGCCATCAGGCACATGAACGGTGGAGT...ACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCAGCTCTGCGCCTGTCTaGCGGTCATCGTTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFSSAPV*RSSLSS
Trigger: CGAGGACAACGATGACCGCCAGACAGGCGCAGAGCT...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR TCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCCACTGTCACAGGCATTaGTGTTGGCCCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFHCHRH*CWPQPP
Trigger: TGGAGGCTGGGGCCAACATCAATGCCTGTGACAGTG...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CCA 90 bp ATCCCTCCAGGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGATCATCCTGCCCACCATaGGCATCTCTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPPGMSSDLRGASVLYSRSSCPP*ASLPAA
Trigger: AGCTGCTGGCAGAGATGCCCATGGTGGGCAGGATGA...TCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCCTCGGAAATCATCAATaGAGCACTGGTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFLGNHQ*STGAGP
Trigger: CGGCCCTGCACCAGTGCTGCATTGATGATTTCCGAG...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp TCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGGATAAAAATAGTCTTTaGAGCCAGACATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SCTVEAGVSVLHPQHQGTDKNSL*SQTSLQ
Trigger: CTGGAGGGATGTCTGGCTGCAAAGACTATTTTTATC...CGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR GCA 90 bp ATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTTTCGTGTGCCGAGGTCAGTaGATCAGTACTAACGAGGAG +
Preference number: 4 (lower is better)
Translates to: MSSDLRGASVLYSRSRGFVCRGQ*ISTNEE
Trigger: CTCCTCGTTAGTACTGATGCACTGACCTCGGCACAC...GAAACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS CCA 90 bp CCTCGGGCGGCTCCGGGCTGGTGGGCGGCGGCTGTTGCCACACGATaGCCTCCTGGGCGTGCTGCTTGCGGTACAGGTCGGTGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: PRAAPGWWAAAVATR*PPGRAACGTGRCAG
Trigger: CCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS-3UTR CAA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCACATGGCGGCGGCTGCTaGCCCACAGGGCTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEAHGGGC*PTGLLG
Trigger: CCCGAGCAGCCCTGTGGGCAAGCAGCCGCCGCCATG...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CAA 90 bp CCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGCGGGGGTCGCTGCAGCTaGGCAGCAGCTCGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: PWGGSLGLCPRQGPCMLSGGRCS*AAARWR
Trigger: GCGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCCC...GCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS TCA 90 bp TGCGCAGTTCTGGCACGGCCCGGGCGGCCTCGATGCTGTCCTGGGTaGTGCCTGCGAGGCGGCAGGCTCAGAGGGAGCGCGACCGGCAGC +
Preference number: 5 (lower is better)
Translates to: CAVLARPGRPRCCPG*CLRGGRLRGSATGS
Trigger: GCTGCCGGTCGCGCTCCCTCTGAGCCTGCCGCCTCGCAGGCATCACCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAGAACTGCGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000532806.1
CDS GCA 90 bp GGAGGTCTGCCCCGGCCTGCAGCCGGCTCCGGATGTCGTCCAGCATaGGCAGTTCTGGCACGGCCCGGGCGGCCTCGATGCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GGLPRPAAGSGCRPA*AVLARPGRPRCCPG
Trigger: CCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAGAACTGCGCATGCTGGACGACATCCGGAGCCGGCTGCAGGCCGGGGCAGACCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000526564.1
ENST00000532806.1
CDS GCA 90 bp TTCTGGCACGGCCCGGGCGGCCTCGATGCTGTCCTGGGTGATGCCTaGGAGGCGGCAGGCTCAGAGGGAGCGCGACCGGCAGCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: FWHGPGGLDAVLGDA*EAAGSEGARPAALP
Trigger: TGGGAGGGCTGCCGGTCGCGCTCCCTCTGAGCCTGCCGCCTCGCAGGCATCACCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAGAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000532806.1
CDS GCA 90 bp CACGAGCAGCTCCACCAGGGGCACCTGTGGACGGCAGGCCGGAGCTaGAGACTGCTGCGCTGGAAGCCCCCTCCCACCTGCTCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: HEQLHQGHLWTAGRS*RLLRWKPPPTCSRP
Trigger: CGGGCGGGAGCAGGTGGGAGGGGGCTTCCAGCGCAGCAGTCTGCAGCTCCGGCCTGCCGTCCACAGGTGCCCCTGGTGGAGCTGCTCGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp CCGGCAGCCTTCGGCTCCCTGCCTTTCCTGACCGTTGGCACCTGCTaGCCTGGGCCTCAGCCAGCAACGCCCAAGGCGGCCCGGCGGGAC +
Preference number: 5 (lower is better)
Translates to: PAAFGSLPFLTVGTC*PGPQPATPKAARRD
Trigger: GTCCCGCCGGGCCGCCTTGGGCGTTGCTGGCTGAGGCCCAGGGCAGCAGGTGCCAACGGTCAGGAAAGGCAGGGAGCCGAAGGCTGCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS GCA 90 bp CCACCGGCAGCCTTCGGCTCCCTGCCTTTCCTGACCGTTGGCACCTaGTGCCCTGGGCCTCAGCCAGCAACGCCCAAGGCGGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: PPAAFGSLPFLTVGT*CPGPQPATPKAARR
Trigger: CCGCCGGGCCGCCTTGGGCGTTGCTGGCTGAGGCCCAGGGCAGCAGGTGCCAACGGTCAGGAAAGGCAGGGAGCCGAAGGCTGCCGGTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS-3UTR CAA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGCCTCGCTGAACCCGTaGGCGGCTGCGACGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEAASLNP*AAATCS
Trigger: GCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGC...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS TCA 90 bp CGCTCAGGCTGGCTCGGTGTTCCAGCAGCAGGGCAGCCGCCTCGCTaGACCCGTTGGCGGCTGCGACGTGCAGCAGCGTGGCCCCGTGGT +
Preference number: 5 (lower is better)
Translates to: RSGWLGVPAAGQPPR*TRWRLRRAAAWPRG
Trigger: ACCACGGGGCCACGCTGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCTGGAACACCGAGCCAGCCTGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000532806.1
CDS TCA 90 bp CGCTCAGGCTGGCTCGGTGTTCCAGCAGCAGGGCAGCCGCCTCGCTaGACCCGTTGGCGGCTGCGACGTGCAGCTGCAGGCAAGCGCCCG +
Preference number: 5 (lower is better)
Translates to: RSGWLGVPAAGQPPR*TRWRLRRAAAGKRP
Trigger: CGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCTGGAACACCGAGCCAGCCTGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS GCA 90 bp AGGGCAGCCGCCTCGCTGAACCCGTTGGCGGCTGCGACGTGCAGCTaGAGGCAAGCGCCCGGCCTGAATTCGGCCCCATCCCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RAAASLNPLAAATCS*RQAPGLNSAPSPTS
Trigger: GGAGGTGGGGGATGGGGCCGAATTCAGGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS GCA 90 bp AGCAGCAGGGCAGCCGCCTCGCTGAACCCGTTGGCGGCTGCGACGTaGAGCTGCAGGCAAGCGCCCGGCCTGAATTCGGCCCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: SSRAAASLNPLAAAT*SCRQAPGLNSAPSP
Trigger: GGGGGATGGGGCCGAATTCAGGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS GCA 90 bp AGCTCCACCAGGGGCACCTGTGGACGGCAGGCCGGAGCTGCAGACTaGTGCGCTGGAAGCCCCCTCCCACCTGCTCCCGCCCGCACTCAC +
Preference number: 5 (lower is better)
Translates to: SSTRGTCGRQAGAAD*CAGSPLPPAPARTH
Trigger: GTGAGTGCGGGCGGGAGCAGGTGGGAGGGGGCTTCCAGCGCAGCAGTCTGCAGCTCCGGCCTGCCGTCCACAGGTGCCCCTGGTGGAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 90 bp CCCGGCCTGCAGCCGGCTCCGGATGTCGTCCAGCATGCGCAGTTCTaGCACGGCCCGGGCGGCCTCGATGCTGTCCTGGGTGATGCCACG +
Preference number: 5 (lower is better)
Translates to: PGLQPAPDVVQHAQF*HGPGGLDAVLGDAT
Trigger: CGTGGCATCACCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAGAACTGCGCATGCTGGACGACATCCGGAGCCGGCTGCAGGCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526564.1
CDS CCA 90 bp CGCCTGTCTGGCGGTCATCGTTGTCCTCGGGCGGCTCCGGGCTGGTaGGCGGCGGCTGTTGCCACACGATGGCCTCCTGGGCGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RLSGGHRCPRAAPGW*AAAVATRWPPGRAA
Trigger: AGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATGACCGCCAGACAGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 90 bp CTGCGCCTGTCTGGCGGTCATCGTTGTCCTCGGGCGGCTCCGGGCTaGTGGGCGGCGGCTGTTGCCACACGATGGCCTCCTGGGCGTGCT +
Preference number: 5 (lower is better)
Translates to: LRLSGGHRCPRAAPG*WAAAVATRWPPGRA
Trigger: AGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATGACCGCCAGACAGGCGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 90 bp AGCATGCGCAGTTCTGGCACGGCCCGGGCGGCCTCGATGCTGTCCTaGGTGATGCCTGCGAGGCGGCAGGCTCAGAGGGAGCGCGACCGG +
Preference number: 5 (lower is better)
Translates to: SMRSSGTARAASMLS*VMPARRQAQRERDR
Trigger: CCGGTCGCGCTCCCTCTGAGCCTGCCGCCTCGCAGGCATCACCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAGAACTGCGCATGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000532806.1
CDS CCA 90 bp CCCGGCCTGCAGCCGGCTCCGGATGTCGTCCAGCATGCGCAGTTCTaGCACGGCCCGGGCGGCCTCGATGCTGTCCTGGGTGATGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGLQPAPDVVQHAQF*HGPGGLDAVLGDAC
Trigger: GCAGGCATCACCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAGAACTGCGCATGCTGGACGACATCCGGAGCCGGCTGCAGGCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000532806.1
CDS-3UTR CAA 90 bp CACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCGGCTCCCAGCCGTCTaGGTCCTTAGCGCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: HQGTHRGEAALGCARDRARLPAV*VLSAQA
Trigger: AGCCTGAGCGCTAAGGACCAAGACGGCTGGGAGCCG...GGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS GCA 90 bp GGGCATCTCTGCCAGCAGCTCCAGGTGCTCGGCCATGGCGGCGGCTaGTTGCCCACAGGGCTGCTCGGGGCACCAGAGTGGGGAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GHLCQQLQVLGHGGG*LPTGLLGAPEWGAW
Trigger: CCAAGCTCCCCACTCTGGTGCCCCGAGCAGCCCTGTGGGCAAGCAGCCGCCGCCATGGCCGAGCACCTGGAGCTGCTGGCAGAGATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS GCA 90 bp GGGCTGGTGGGCGGCGGCTGTTGCCACACGATGGCCTCCTGGGCGTaGTGCTTGCGGTACAGGTCGGTGCGCTGGGTTAGGCTCACCCGC +
Preference number: 5 (lower is better)
Translates to: GLVGGGCCHTMASWA*CLRYRSVRWVRLTR
Trigger: GCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 90 bp GTGTTCCAGCAGCAGGGCAGCCGCCTCGCTGAACCCGTTGGCGGCTaGGACGTGCAGCTGCAGGCAAGCGCCCGGCCTGAATTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: VFQQQGSRLAEPVGG*DVQLQASARPEFGP
Trigger: GGGGCCGAATTCAGGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCTGGAACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS CCA 90 bp GGCTCCGGGCTGGTGGGCGGCGGCTGTTGCCACACGATGGCCTCCTaGGCGTGCTGCTTGCGGTACAGGTCGGTGCGCTGGGTTAGGCTC +
Preference number: 5 (lower is better)
Translates to: GSGLVGGGCCHTMAS*ACCLRYRSVRWVRL
Trigger: GAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 90 bp TGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGCCTTaGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: CCTRSTRARTVGRQP*AVPATGPLHAEQQP
Trigger: AGGCTGTTGCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 90 bp GAAGCGCCCACCGGCAGCCTTCGGCTCCCTGCCTTTCCTGACCGTTaGCACCTGCTGCCCTGGGCCTCAGCCAGCAACGCCCAAGGCGGC +
Preference number: 5 (lower is better)
Translates to: EAPTGSLRLPAFPDR*HLLPWASASNAQGG
Trigger: GCCGCCTTGGGCGTTGCTGGCTGAGGCCCAGGGCAGCAGGTGCCAACGGTCAGGAAAGGCAGGGAGCCGAAGGCTGCCGGTGGGCGCTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS-3UTR CAA 90 bp AAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGAGCTTCGTGCCCTaGGCTGGGTCAGGAGGCCCC +
Preference number: 5 (lower is better)
Translates to: KPGFPCCTRSTRARTVGRQSFVP*AGSGGP
Trigger: GGGGCCTCCTGACCCAGCCAAGGGCACGAAGCTCTG...CCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CAA 90 bp GGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTGAGCAACAGCCTGACCACTTCGGGGTaGTCCTCCTCCGGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: GGSLGLCPRQGPCMLSNSLTTSG*SSSGGG
Trigger: GCCGCCCCCGGAGGAGGACAACCCCGAAGTGGTCAG...GCTGTTGCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CAA 90 bp AGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGGGTGTGGTGGGCCTaGTCGTGGACCAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SRGFRAAPAAPGHAPWGGRVWWA*SWTRVW
Trigger: CCACACCCTGGTCCACGACAAGGCCCACCACACCCT...GCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS TCA 90 bp CTGGAGCCCAGGAGCTGTGGACAGGCCCAGCCCCCAGCCTTGGCATaGGACGGCACCCAGGTAGCAGGGAGTGGGCCGTCTGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LEPRSCGQAQPPALA*DGTQVAGSGPSAGS
Trigger: GCTCCCAGCAGACGGCCCACTCCCTGCTACCTGGGTGCCGTCTCATGCCAAGGCTGGGGGCTGGGCCTGTCCACAGCTCCTGGGCTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp GCCACACGATGGCCTCCTGGGCGTGCTGCTTGCGGTACAGGTCGGTaGGCTGGGTTAGGCTCACCCGCCTCACCACCTTCCCGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: ATRWPPGRAACGTGR*AGLGSPASPPSRGC
Trigger: GCAGCCGCGGGAAGGTGGTGAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS GCA 90 bp CTGGTGGGCGGCGGCTGTTGCCACACGATGGCCTCCTGGGCGTGCTaGTTGCGGTACAGGTCGGTGCGCTGGGTTAGGCTCACCCGCCTC +
Preference number: 5 (lower is better)
Translates to: LVGGGCCHTMASWAC*LRYRSVRWVRLTRL
Trigger: GAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 90 bp TCATCGTTGTCCTCGGGCGGCTCCGGGCTGGTGGGCGGCGGCTGTTaGCACACGATGGCCTCCTGGGCGTGCTGCTTGCGGTACAGGTCG +
Preference number: 5 (lower is better)
Translates to: SSLSSGGSGLVGGGC*HTMASWACCLRYRS
Trigger: CGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 90 bp GGCTCAGCTGTCTCAGGGCTCTCGGGCCCCTCAGGTGGGGGTCGCTaGAGCTTGGCAGCAGCTCGCTGGCGCTTCAGGTCAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GSAVSGLSGPSGGGR*SLAAARWRFRSARV
Trigger: CACCCTGGCTGACCTGAAGCGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCCCACCTGAGGGGCCCGAGAGCCCTGAGACAGCTGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 90 bp TCGGGCCCCTCAGGTGGGGGTCGCTGCAGCTTGGCAGCAGCTCGCTaGCGCTTCAGGTCAGCCAGGGTGTGGTGGGCCTTGTCGTGGACC +
Preference number: 5 (lower is better)
Translates to: SGPSGGGRCSLAAAR*RFRSARVWWALSWT
Trigger: GGTCCACGACAAGGCCCACCACACCCTGGCTGACCTGAAGCGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCCCACCTGAGGGGCCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 90 bp CTGTCTCAGGGCTCTCGGGCCCCTCAGGTGGGGGTCGCTGCAGCTTaGCAGCAGCTCGCTGGCGCTTCAGGTCAGCCAGGGTGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LSQGSRAPQVGVAAA*QQLAGASGQPGCGG
Trigger: CCCACCACACCCTGGCTGACCTGAAGCGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCCCACCTGAGGGGCCCGAGAGCCCTGAGACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 90 bp AGGCAGGCCAGGCTCAGCTGTCTCAGGGCTCTCGGGCCCCTCAGGTaGGGGTCGCTGCAGCTTGGCAGCAGCTCGCTGGCGCTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: RQARLSCLRALGPLR*GSLQLGSSSLALQV
Trigger: GACCTGAAGCGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCCCACCTGAGGGGCCCGAGAGCCCTGAGACAGCTGAGCCTGGCCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS-3UTR CAA 90 bp CACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGTTGACCGCCAGGAGATaGGCGCCACTGGCGATGAGC +
Preference number: 5 (lower is better)
Translates to: HAPWGGSLGLCPRQGPCMLTARR*APLAMS
Trigger: GCTCATCGCCAGTGGCGCCAATCTCCTGGCGGTCAA...CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CAA 90 bp AGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCAGGAGGGCGTCGTGCTaGTGCTTCAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SRGFRAAPAAPGHAPWGGRRASC*CFSSSS
Trigger: GCTGCTGGAGCTGAAGCACAAGCACGACGCCCTCCT...GCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS TCA 90 bp GGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTaGGCAACAGCCTCACATGAGCAGGCAGCACGGCCTCCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: GEAALGCARDRAPAC*ATASHEQAARPPLH
Trigger: GTGGAGAGGAGGCCGTGCTGCCTGCTCATGTGAGGCTGTTGCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 90 bp TGGGCGGCGGCTGTTGCCACACGATGGCCTCCTGGGCGTGCTGCTTaGGGTACAGGTCGGTGCGCTGGGTTAGGCTCACCCGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: WAAAVATRWPPGRAA*GTGRCAGLGSPASP
Trigger: TGGTGAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS-3UTR CAA 90 bp GCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCATCACAGGCATTGATGTaGGCCCCAGCCTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: AGVSVLHPQHQGTHRGEASQALM*APASRS
Trigger: GCTCCTGGAGGCTGGGGCCAACATCAATGCCTGTGA...TGCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CAA 90 bp ACCAGGGCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCTCACTGTCACAGGCATaGATGTTGGCCCCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TRARTVGRQPWAVPATGPSLSQA*MLAPAS
Trigger: GGAGGCTGGGGCCAACATCAATGCCTGTGACAGTGA...GGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGCCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CAA 90 bp AGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCACCGTGGGGAGGCATGTTCCCGTCGGTGTaGACCGCCAGGAGATTGGCG +
Preference number: 5 (lower is better)
Translates to: SRGFRAAPAAPGHAPWGGMFPSV*TARRLA
Trigger: CGCCAATCTCCTGGCGGTCAACACCGACGGGAACAT...GCCTCCCCACGGTGCGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS GCA 90 bp CTAGCTGTCGACAAGCAGCGCCTCGCCTCCCTCTCGGGGTCAGGGTaGACAACCTATGGGAGGCAGCCCCGAGACCTGGCCGGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LAVDKQRLASLSGSG*TTYGRQPRDLAGLS
Trigger: ACTGAGGCCGGCCAGGTCTCGGGGCTGCCTCCCATAGGTTGTGCACCCTGACCCCGAGAGGGAGGCGAGGCGCTGCTTGTCGACAGCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS GCA 90 bp GCCACACGATGGCCTCCTGGGCGTGCTGCTTGCGGTACAGGTCGGTaGGCTGGGTTAGGCTCACCCGCCTCACCACCTTCCTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: ATRWPPGRAACGTGR*AGLGSPASPPSWGG
Trigger: TCCTCCCCAGGAAGGTGGTGAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528430.2
CDS GCA 90 bp GGGGGTCCACTCATGGCCTCAGCTCACCTCACAGCAGGAGCCCTCTaGATGCAGCCCCCGCCTGAAGGACGGCTGTCCCGCACAGGCTCA +
Preference number: 5 (lower is better)
Translates to: GGPLMASAHLTAGAL*MQPPPEGRLSRTGS
Trigger: TGAGCCTGTGCGGGACAGCCGTCCTTCAGGCGGGGGCTGCATGCAGAGGGCTCCTGCTGTGAGGTGAGCTGAGGCCATGAGTGGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp GAGAGCACAATCTGCAGGCCCCTCTTCTACGACTCCTCATCCGTGTaGCAGTACCTCGCGCCCCGCGCCGACCGCCGCACAAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: ESTICRPLFYDSSSV*QYLAPRADRRTSGS
Trigger: GGACCCACTTGTGCGGCGGTCGGCGCGGGGCGCGAGGTACTGGCACACGGATGAGGAGTCGTAGAAGAGGGGCCTGCAGATTGTGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435887.2
ENST00000526183.5
CDS GCA 90 bp GTCCACTCATGGCCTCAGCTCACCTCACAGCAGGAGCCCTCTGCATaGAGCCCCCGCCTGAAGGACGGCTGTCCCGCACAGGCTCACCTC +
Preference number: 5 (lower is better)
Translates to: VHSWPQLTSQQEPSA*SPRLKDGCPAQAHL
Trigger: GAGGTGAGCCTGTGCGGGACAGCCGTCCTTCAGGCGGGGGCTGCATGCAGAGGGCTCCTGCTGTGAGGTGAGCTGAGGCCATGAGTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp CAGGCATCTGTCTGGCCCAGGCCGGTCACACTCCCAGAAGCCCTCTaGCTCCACCCACCTGCAGGCCCTTCATGGTGGTGCTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: QASVWPRPVTLPEAL*LHPPAGPSWWCSSP
Trigger: AGGGCTGGAGCACCACCATGAAGGGCCTGCAGGTGGGTGGAGGCAGAGGGCTTCTGGGAGTGTGACCGGCCTGGGCCAGACAGATGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 90 bp GCAGCCCTCCCACAGCCGCACCGCCGCACCTACCACGGTCGGCCATaGCAGTCTCCAGGCAGTCCAGCGTCTGCTCATCATCACACAGGT +
Preference number: 5 (lower is better)
Translates to: AALPQPHRRTYHGRP*QSPGSPASAHHHTG
Trigger: ACCTGTGTGATGATGAGCAGACGCTGGACTGCCTGGAGACTGCCATGGCCGACCGTGGTAGGTGCGGCGGTGCGGCTGTGGGAGGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000532806.1
CDS-3UTR CAA 90 bp TCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGTCCTGGGCGTGCTGCTaGCGGTACAGGTCGGTGCGC +
Preference number: 5 (lower is better)
Translates to: SCTVEAGVSVLHPQHQGTSWACC*RYRSVR
Trigger: GCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGA...CGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CAA 90 bp GCACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATCTCCGGTCTAGTCGCTaGGAGTATAGATGCCGCACT +
Preference number: 5 (lower is better)
Translates to: ARTVGRQPWAVPATGPLHLRSSR*EYRCRT
Trigger: AGTGCGGCATCTATACTCCAAGCGACTAGACCGGAG...ATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS CCA 90 bp CTGCACCCATGGAAATTAATCCCACCGTGCCCCGGGCCTCCGCTCTaGTACAGACAGGGGCCCACACCAGTCCTGGACGCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LHPWKLIPPCPGPPL*YRQGPTPVLDAPSQ
Trigger: CTGGGAGGGAGCGTCCAGGACTGGTGTGGGCCCCTGTCTGTACCAGAGCGGAGGCCCGGGGCACGGTGGGATTAATTTCCATGGGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS-3UTR CAA 90 bp CACGCACCGTGGGGAGGCAGCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCAGCTGCTCACACCTTaGAAGACTCCACCGTTCATG +
Preference number: 5 (lower is better)
Translates to: HAPWGGSLGLCPRQGPCMQLLTP*KTPPFM
Trigger: CATGAACGGTGGAGTCTTCAAAGGTGTGAGCAGCTG...CATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGCTGCCTCCCCACGGTGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS GCA 90 bp CGTACACGGCTCCCCTCTCTGCACCCATGGAAATTAATCCCACCGTaGCCCGGGCCTCCGCTCTGGTACAGACAGGGGCCCACACCAGTC +
Preference number: 5 (lower is better)
Translates to: RTRLPSLHPWKLIPP*PGPPLWYRQGPTPV
Trigger: GACTGGTGTGGGCCCCTGTCTGTACCAGAGCGGAGGCCCGGGGCACGGTGGGATTAATTTCCATGGGTGCAGAGAGGGGAGCCGTGTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CCA 90 bp GCACCTGCTCGACCCCTGCCACCAACCCACAGCGGTGTCCACACGTaGGCTCTGTGTCCCGGCCAGTGTCTTCCACTAGACGACAGGCTT +
Preference number: 5 (lower is better)
Translates to: APARPLPPTHSGVHT*ALCPGQCLPLDDRL
Trigger: AAGCCTGTCGTCTAGTGGAAGACACTGGCCGGGACACAGAGCCCACGTGTGGACACCGCTGTGGGTTGGTGGCAGGGGTCGAGCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000529009.1
ENST00000529283.5
ENST00000533088.1
CDS-3UTR CAA 90 bp TCCTGTACAGTAGAAGCCGGGGTTTCCGTGCTGCACCCGCAGCACCAGGGCACGCGTCCATCAGGGACTTaGCGTTCAGGTCGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: SCTVEAGVSVLHPQHQGTRPSGT*RSGRPR
Trigger: ACGGGGCCGACCTGAACGCAAAGTCCCTGATGGACG...CGTGCCCTGGTGCTGCGGGTGCAGCACGGAAACCCCGGCTTCTACTGTACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS-3UTR CAA 90 bp GGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTGTCTGGCGGTCATCGTaGTCCTCGGGCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GMSSDLRGASVLYSRSRGVWRSS*SSGGSG
Trigger: CCCGGAGCCGCCCGAGGACAACGATGACCGCCAGAC...ACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS GCA 90 bp CCCTTCATGGTGGTGCTCCAGCCCTCCGACCCCCAGAACAGGCCGTaGTCCTGTGTGAGAGCAGCACTCCAACAATCCCACACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PFMVVLQPSDPQNRP*SCVRAALQQSHTSL
Trigger: GAGGGAGGTGTGGGATTGTTGGAGTGCTGCTCTCACACAGGAGCACGGCCTGTTCTGGGGGTCGGAGGGCTGGAGCACCACCATGAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp CGAGGTGAGGACAGGGTCCTGCCCCTGGTCAGGTCCTGTCAACTGTaGTTCGGCCCAGGACCCAGGGAAGGACAAGGAAGACAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: RGEDRVLPLVRSCQL*FGPGPREGQGRQWC
Trigger: GCACCACTGTCTTCCTTGTCCTTCCCTGGGTCCTGGGCCGAAGCACAGTTGACAGGACCTGACCAGGGGCAGGACCCTGTCCTCACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp GGAACTGGCGGACTGCAAAAAGGTGGCGAGGTGAGGACAGGGTCCTaGCCCTGGTCAGGTCCTGTCAACTGTGCTTCGGCCCAGGACCCA +
Preference number: 5 (lower is better)
Translates to: GTGGLQKGGEVRTGS*PWSGPVNCASAQDP
Trigger: TGGGTCCTGGGCCGAAGCACAGTTGACAGGACCTGACCAGGGGCAGGACCCTGTCCTCACCTCGCCACCTTTTTGCAGTCCGCCAGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp CGTCCAGGAAGCAACTGGGGCGCCAAGACGCCCAGGAGGGCTCACTaGTGGACTAGACACACTTTGAGAAAGGCAGCGGTACCCCCGCCT +
Preference number: 5 (lower is better)
Translates to: RPGSNWGAKTPRRAH*WTRHTLRKAAVPPP
Trigger: AGGCGGGGGTACCGCTGCCTTTCTCAAAGTGTGTCTAGTCCAGCAGTGAGCCCTCCTGGGCGTCTTGGCGCCCCAGTTGCTTCCTGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CCA 90 bp CCAGGAAGCAACTGGGGCGCCAAGACGCCCAGGAGGGCTCACTGCTaGACTAGACACACTTTGAGAAAGGCAGCGGTACCCCCGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PGSNWGAKTPRRAHC*TRHTLRKAAVPPPP
Trigger: TGGAGGCGGGGGTACCGCTGCCTTTCTCAAAGTGTGTCTAGTCCAGCAGTGAGCCCTCCTGGGCGTCTTGGCGCCCCAGTTGCTTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CCA 90 bp GCCCCTCTTCTACGACTCCTCATCCGTGTGCCAGTACCTTCGCCTTaGAACAAAACGCGAAGCGCCCACCGGCAGCCTTCGGCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: APLLRLLIRVPVPSP*NKTRSAHRQPSAPC
Trigger: GCAGGGAGCCGAAGGCTGCCGGTGGGCGCTTCGCGTTTTGTTCCAAGGCGAAGGTACTGGCACACGGATGAGGAGTCGTAGAAGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS-3UTR CAA 90 bp GACATCCCTCCAGGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTGGTGGGCGGCGGCTGTaGCCACACGATGGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: DIPPGMSSDLRGASVLYSGGRRL*PHDGLL
Trigger: CAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACC...ACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGGATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS GCA 90 bp GCTCACACCTTTGAAGACTCCACCGTTCATGTGCCTGATGGCACCTaGTCGACCCCTGCCACCAACCCACAGCGGTGTCCACACGTGGGC +
Preference number: 5 (lower is better)
Translates to: AHTFEDSTVHVPDGT*STPATNPQRCPHVG
Trigger: GCCCACGTGTGGACACCGCTGTGGGTTGGTGGCAGGGGTCGAGCAGGTGCCATCAGGCACATGAACGGTGGAGTCTTCAAAGGTGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000529009.1
ENST00000529283.5
ENST00000533088.1
CDS GCA 90 bp CTGCCTGGAGGCTACCACAGCTCCTTCGGCTCTTCCCTGACAACCTaGCAGCCCTGTGTTCATGAGCTCTCCTGGGTCCTCTGGGACCTG +
Preference number: 5 (lower is better)
Translates to: LPGGYHSSFGSSLTT*QPCVHELSWVLWDL
Trigger: CAGGTCCCAGAGGACCCAGGAGAGCTCATGAACACAGGGCTGGCAGGTTGTCAGGGAAGAGCCGAAGGAGCTGTGGTAGCCTCCAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS-3UTR CAA 90 bp GGCATGTCTTCTGACCTGAGAGGGGCCAGTGTCCTGTACAGTAGAAGCCGGGGTCCCCCTACTCGGCCATaGTGCGGCCTGACCACTTCG +
Preference number: 5 (lower is better)
Translates to: GMSSDLRGASVLYSRSRGPPTRP*CGLTTS
Trigger: CGAAGTGGTCAGGCCGCACAATGGCCGAGTAGGGGG...ACCCCGGCTTCTACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292539.8
CDS TCA 90 bp AGAGCTCCCTGCCTGGAGGCTACCACAGCTCCTTCGGCTCTTCCCTaGCAACCTGCCAGCCCTGTGTTCATGAGCTCTCCTGGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RAPCLEATTAPSALP*QPASPVFMSSPGSS
Trigger: AGAGGACCCAGGAGAGCTCATGAACACAGGGCTGGCAGGTTGTCAGGGAAGAGCCGAAGGAGCTGTGGTAGCCTCCAGGCAGGGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp TCTGCTCCGGAGGGAGGCAGGAAGGAGTCTCAAGGGCCACCACAGTaGCTCTTCCCCCAAGACTCCAGAGCACCAGAAGTGGAACCCACA +
Preference number: 5 (lower is better)
Translates to: SAPEGGRKESQGPPQ*LFPQDSRAPEVEPT
Trigger: TGTGGGTTCCACTTCTGGTGCTCTGGAGTCTTGGGGGAAGAGGCACTGTGGTGGCCCTTGAGACTCCTTCCTGCCTCCCTCCGGAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp CATCTCTGCTTTGAAGACTCCACCGTTCATGTGCCTGATGGCACCTaGTCGACCCCTGCCACCAACCCACAGCGGTGTCCACACGTGGGC +
Preference number: 5 (lower is better)
Translates to: HLCFEDSTVHVPDGT*STPATNPQRCPHVG
Trigger: GCCCACGTGTGGACACCGCTGTGGGTTGGTGGCAGGGGTCGAGCAGGTGCCATCAGGCACATGAACGGTGGAGTCTTCAAAGCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533829.1
CDS CCA 90 bp CTTCTTCCAGGTCATTTCGGGCAGCGGCCTCCAGAAGGACAACACTaGGAGGGAAGAGGACCTGCTTCAGGAGCCCTTGGCTGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LLPGHFGQRPPEGQH*EGRGPASGALGWLP
Trigger: AGGCAGCCAGCCAAGGGCTCCTGAAGCAGGTCCTCTTCCCTCCCAGTGTTGTCCTTCTGGAGGCCGCTGCCCGAAATGACCTGGAAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000532806.1
CDS TCA 90 bp AGAAGTGGAACCCACACAGCTGGGGCTGCAAGCGTGGGGCACAGGTaGGGAGAAGAGAGTCACAAGCAGAGCCTAGGGCAGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: RSGTHTAGAASVGHR*GEESHKQSLGQALR
Trigger: TCTCAGTGCCTGCCCTAGGCTCTGCTTGTGACTCTCTTCTCCTCACCTGTGCCCCACGCTTGCAGCCCCAGCTGTGTGGGTTCCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 90 bp GAGAGCACAATCTGCAGGCCCCTCTTCTACGACTCCTCATCCGTGTaGCAGTACCTTCGCCTTGGAACAAAACGCGAAGCGCCCACCGGC +
Preference number: 5 (lower is better)
Translates to: ESTICRPLFYDSSSV*QYLRLGTKREAPTG
Trigger: GCCGGTGGGCGCTTCGCGTTTTGTTCCAAGGCGAAGGTACTGGCACACGGATGAGGAGTCGTAGAAGAGGGGCCTGCAGATTGTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS CCA 90 bp CAAGACCCTTCTCCCAGAGAAACCCCAATACGTCCAGGAAGCAACTaGGGCGCCAAGACGCCCAGGAGGGCTCACTGCTGGACTAGACAC +
Preference number: 5 (lower is better)
Translates to: QDPSPRETPIRPGSN*GAKTPRRAHCWTRH
Trigger: GTGTCTAGTCCAGCAGTGAGCCCTCCTGGGCGTCTTGGCGCCCCAGTTGCTTCCTGGACGTATTGGGGTTTCTCTGGGAGAAGGGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CCA 90 bp TCTCGGGGTCAGGGTGCACAACCTATGGGAGGCAGCCCCGAGACCTaGCCGGCCTCAGTGCAGGGTCTGAAACTAATTACCCAGATAACA +
Preference number: 5 (lower is better)
Translates to: SRGQGAQPMGGSPET*PASVQGLKLITQIT
Trigger: TGTTATCTGGGTAATTAGTTTCAGACCCTGCACTGAGGCCGGCCAGGTCTCGGGGCTGCCTCCCATAGGTTGTGCACCCTGACCCCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS CCA 90 bp TCTTCCCCCAAGACTCCAGAGCACCAGAAGTGGAACCCACACAGCTaGGGCTGCAAGCGTGGGGCACAGGTGAGGAGAAGAGAGTCACAA +
Preference number: 5 (lower is better)
Translates to: SSPKTPEHQKWNPHS*GCKRGAQVRRRESQ
Trigger: TTGTGACTCTCTTCTCCTCACCTGTGCCCCACGCTTGCAGCCCCAGCTGTGTGGGTTCCACTTCTGGTGCTCTGGAGTCTTGGGGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS TCA 90 bp CAGGCCCCTCTTCTACGACTCCTCATCCGTGTGCCAGTACCCCAGTaGGACTCCACTTTCTCCTTCAGCCTAGCTCCAAGGCCCACACAA +
Preference number: 5 (lower is better)
Translates to: QAPLLRLLIRVPVPQ*DSTFSFSLAPRPTQ
Trigger: TTGTGTGGGCCTTGGAGCTAGGCTGAAGGAGAAAGTGGAGTCTCACTGGGGTACTGGCACACGGATGAGGAGTCGTAGAAGAGGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529283.5
CDS GCA 90 bp CACTCACTGTCACAGGCATTGATGTTGGCCCCAGCCTCCAGGAGCTaGTGCACCATCTCTCGGAAATCATCAATGCAGCACTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: HSLSQALMLAPASRS*CTISRKSSMQHWCR
Trigger: CCTGCACCAGTGCTGCATTGATGATTTCCGAGAGATGGTGCAGCAGCTCCTGGAGGCTGGGGCCAACATCAATGCCTGTGACAGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000532806.1
CDS GCA 90 bp CAGGAGATCGAGACCATCCTAGCTAACAGGGTGAAACCCCATCTCTaGTTTGAAGACTCCACCGTTCATGTGCCTGATGGCACCTGCTCG +
Preference number: 5 (lower is better)
Translates to: QEIETILANRVKPHL*FEDSTVHVPDGTCS
Trigger: CGAGCAGGTGCCATCAGGCACATGAACGGTGGAGTCTTCAAAGCAGAGATGGGGTTTCACCCTGTTAGCTAGGATGGTCTCGATCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533829.1
CDS GCA 72 bp GCCTCACCACCTTCCCGCGGCTGCCGGCGCTGGAGGTaGGGCGGCGCAGCAAGGAGCGCTGGCGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ASPPSRGCRRWR*GGAARSAGGSG
Trigger: CCCAGAGCCGCCAGCGCTCCTTGCTGCGCCGCCGCACCTCCAGCGCCGGCAGCCGCGGGAAGGTGGTGAGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS CCA 72 bp CCAGTACCTCGCGCCCCGCGCCGACCGCCGCACAAGTaGGTCCGCTGGCTTCCGCGGGTCAGTGGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: PVPRAPRRPPHK*VRWLPRVSGPR
Trigger: GCGGGGCCCACTGACCCGCGGAAGCCAGCGGACCCACTTGTGCGGCGGTCGGCGCGGGGCGCGAGGTACTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435887.2
ENST00000526183.5
CDS CAA 90 bp TCCGGGGGCGGCGGCCTGAGCTCTGCGCCTGTCTGGCGGTCATCGTaGTCCTCGGGCGGCTCCGGGCTGGTGGGCGGCGGCTGTTGCCAC +
Preference number: 6 (lower is better)
Translates to: SGGGGLSSAPVWRSS*SSGGSGLVGGGCCH
Trigger: GTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATGACCGCCAGACAGGCGCAGAGCTCAGGCCGCCGCCCCCGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CAA 72 bp GGCGGCCTGAGCTCTGCGCCTGTCTGGCGGTCATCGTaGTCCTCGGGCGGCTCCGGGCTGGTGGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: GGLSSAPVWRSS*SSGGSGLVGGG
Trigger: GCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATGACCGCCAGACAGGCGCAGAGCTCAGGCCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS TCA 72 bp CTGGCACGGCCCGGGCGGCCTCGATGCTGTCCTGGGTaGTGCCTGCGAGGCGGCAGGCTCAGAGGGAGCGCG +
Preference number: 6 (lower is better)
Translates to: LARPGRPRCCPG*CLRGGRLRGSA
Trigger: CGCGCTCCCTCTGAGCCTGCCGCCTCGCAGGCATCACCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000532806.1
CDS GCA 72 bp CCCCGGCCTGCAGCCGGCTCCGGATGTCGTCCAGCATaGGCAGTTCTGGCACGGCCCGGGCGGCCTCGATGC +
Preference number: 6 (lower is better)
Translates to: PRPAAGSGCRPA*AVLARPGRPRC
Trigger: GCATCGAGGCCGCCCGGGCCGTGCCAGAACTGCGCATGCTGGACGACATCCGGAGCCGGCTGCAGGCCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000526564.1
ENST00000532806.1
CDS GCA 72 bp CAGCAGGGCAGCCGCCTCGCTGAACCCGTTGGCGGCTaGGACGTGCAGCAGCGTGGCCCCGTGGTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: QQGSRLAEPVGG*DVQQRGPVVQG
Trigger: CCCCTGGACCACGGGGCCACGCTGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000532806.1
CDS GCA 72 bp TCCTCGGGCGGCTCCGGGCTGGTGGGCGGCGGCTGTTaGCACACGATGGCCTCCTGGGCGTGCTGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: SSGGSGLVGGGC*HTMASWACCLR
Trigger: CCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 72 bp GGCCCGGGCGGCCTCGATGCTGTCCTGGGTGATGCCTaGGAGGCGGCAGGCTCAGAGGGAGCGCGACCGGCA +
Preference number: 6 (lower is better)
Translates to: GPGGLDAVLGDA*EAAGSEGARPA
Trigger: TGCCGGTCGCGCTCCCTCTGAGCCTGCCGCCTCGCAGGCATCACCCAGGACAGCATCGAGGCCGCCCGGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000532806.1
CDS CCA 72 bp GGCGGTCATCGTTGTCCTCGGGCGGCTCCGGGCTGGTaGGCGGCGGCTGTTGCCACACGATGGCCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: GGHRCPRAAPGW*AAAVATRWPPG
Trigger: CCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATGACCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 72 bp CCCGTGCGCCACGAGCAGCTCCACCAGGGGCACCTGTaGACGGCAGGCCGGAGCTGCAGACTGCTGCGCTGG +
Preference number: 6 (lower is better)
Translates to: PVRHEQLHQGHL*TAGRSCRLLRW
Trigger: CCAGCGCAGCAGTCTGCAGCTCCGGCCTGCCGTCCACAGGTGCCCCTGGTGGAGCTGCTCGTGGCGCACGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 72 bp GCAGCCGCCTCGCTGAACCCGTTGGCGGCTGCGACGTaGAGCTGCAGGCAAGCGCCCGGCCTGAATTCGGCC +
Preference number: 6 (lower is better)
Translates to: AAASLNPLAAAT*SCRQAPGLNSA
Trigger: GGCCGAATTCAGGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS GCA 72 bp CAGCAGGGCAGCCGCCTCGCTGAACCCGTTGGCGGCTaGGACGTGCAGCTGCAGGCAAGCGCCCGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: QQGSRLAEPVGG*DVQLQASARPE
Trigger: TTCAGGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS GCA 72 bp CTCCACCAGGGGCACCTGTGGACGGCAGGCCGGAGCTaGAGACTGCTGCGCTGGAAGCCCCCTCCCACCTGC +
Preference number: 6 (lower is better)
Translates to: LHQGHLWTAGRS*RLLRWKPPPTC
Trigger: GCAGGTGGGAGGGGGCTTCCAGCGCAGCAGTCTGCAGCTCCGGCCTGCCGTCCACAGGTGCCCCTGGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp GCTCCGGGCTGGTGGGCGGCGGCTGTTGCCACACGATaGCCTCCTGGGCGTGCTGCTTGCGGTACAGGTCGG +
Preference number: 6 (lower is better)
Translates to: APGWWAAAVATR*PPGRAACGTGR
Trigger: CCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CAA 72 bp TGTTCCAGCAGCAGGGCAGCCGCCTCGCTGAACCCGTaGGCGGCTGCGACGTGCAGCAGCGTGGCCCCGTGG +
Preference number: 6 (lower is better)
Translates to: CSSSRAAASLNP*AAATCSSVAPW
Trigger: CCACGGGGCCACGCTGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCTGGAACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000532806.1
CDS CAA 90 bp CATCTCTGCCAGCAGCTCCAGGTGCTCGGCCATGGCGGCGGCTGCTaGCCCACAGGGCTGCTCGGGGCACCAGAGTGGGGAGCTTGGGGG +
Preference number: 6 (lower is better)
Translates to: HLCQQLQVLGHGGGC*PTGLLGAPEWGAWG
Trigger: CCCCCAAGCTCCCCACTCTGGTGCCCCGAGCAGCCCTGTGGGCAAGCAGCCGCCGCCATGGCCGAGCACCTGGAGCTGCTGGCAGAGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS TCA 72 bp TGGCTCGGTGTTCCAGCAGCAGGGCAGCCGCCTCGCTaGACCCGTTGGCGGCTGCGACGTGCAGCAGCGTGG +
Preference number: 6 (lower is better)
Translates to: WLGVPAAGQPPR*TRWRLRRAAAW
Trigger: CCACGCTGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCTGGAACACCGAGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000532806.1
CDS TCA 72 bp TGGCTCGGTGTTCCAGCAGCAGGGCAGCCGCCTCGCTaGACCCGTTGGCGGCTGCGACGTGCAGCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: WLGVPAAGQPPR*TRWRLRRAAAG
Trigger: GCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCTGGAACACCGAGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS GCA 72 bp GCCTCGCTGAACCCGTTGGCGGCTGCGACGTGCAGCTaGAGGCAAGCGCCCGGCCTGAATTCGGCCCCATCC +
Preference number: 6 (lower is better)
Translates to: ASLNPLAAATCS*RQAPGLNSAPS
Trigger: GGATGGGGCCGAATTCAGGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS CCA 72 bp CCTCGCCTCCCTCTCGGGGTCAGGGTGCACAACCTATaGGAGGCAGCCCCGAGACCTGGCCGGCCTCAGTGC +
Preference number: 6 (lower is better)
Translates to: PRLPLGVRVHNL*EAAPRPGRPQC
Trigger: GCACTGAGGCCGGCCAGGTCTCGGGGCTGCCTCCCATAGGTTGTGCACCCTGACCCCGAGAGGGAGGCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS CCA 72 bp CAGCCGGCTCCGGATGTCGTCCAGCATGCGCAGTTCTaGCACGGCCCGGGCGGCCTCGATGCTGTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: QPAPDVVQHAQF*HGPGGLDAVLG
Trigger: ACCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAGAACTGCGCATGCTGGACGACATCCGGAGCCGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000526564.1
ENST00000532806.1
CDS CCA 72 bp CTGGTGGGCGGCGGCTGTTGCCACACGATGGCCTCCTaGGCGTGCTGCTTGCGGTACAGGTCGGTGCGCTGG +
Preference number: 6 (lower is better)
Translates to: LVGGGCCHTMAS*ACCLRYRSVRW
Trigger: CCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 72 bp TCTGGCGGTCATCGTTGTCCTCGGGCGGCTCCGGGCTaGTGGGCGGCGGCTGTTGCCACACGATGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SGGHRCPRAAPG*WAAAVATRWPP
Trigger: AGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATGACCGCCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 72 bp AGGCTCAGCTGTCTCAGGGCTCTCGGGCCCCTCAGGTaGGGGTCGCTGCAGCTTGGCAGCAGCTCGCTGGCG +
Preference number: 6 (lower is better)
Translates to: RLSCLRALGPLR*GSLQLGSSSLA
Trigger: CGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCCCACCTGAGGGGCCCGAGAGCCCTGAGACAGCTGAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CAA 72 bp TGTTCCAGCAGCAGGGCAGCCGCCTCGCTGAACCCGTaGGCGGCTGCGACGTGCAGCTGCAGGCAAGCGCCC +
Preference number: 6 (lower is better)
Translates to: CSSSRAAASLNP*AAATCSCRQAP
Trigger: GGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCTGGAACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS CAA 90 bp GTGGGCGGCGGCTGTTGCCACACGATGGCCTCCTGGGCGTGCTGCTaGCGGTACAGGTCGGTGCGCTGGGTTAGGCTCACCCGCCTCACC +
Preference number: 6 (lower is better)
Translates to: VGGGCCHTMASWACC*RYRSVRWVRLTRLT
Trigger: GGTGAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CAA 90 bp GTCATCGTTGTCCTCGGGCGGCTCCGGGCTGGTGGGCGGCGGCTGTaGCCACACGATGGCCTCCTGGGCGTGCTGCTTGCGGTACAGGTC +
Preference number: 6 (lower is better)
Translates to: VIVVLGRLRAGGRRL*PHDGLLGVLLAVQV
Trigger: GACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CAA 90 bp CTGGCTCGGTGTTCCAGCAGCAGGGCAGCCGCCTCGCTGAACCCGTaGGCGGCTGCGACGTGCAGCTGCAGGCAAGCGCCCGGCCTGAAT +
Preference number: 6 (lower is better)
Translates to: LARCSSSRAAASLNP*AAATCSCRQAPGLN
Trigger: ATTCAGGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGCGAGGCGGCTGCCCTGCTGCTGGAACACCGAGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS TCA 72 bp CGGCTGCGACGTGCAGCTGCAGGCAAGCGCCCGGCCTaGATTCGGCCCCATCCCCCACCTCCAAGTAGCGAG +
Preference number: 6 (lower is better)
Translates to: RLRRAAAGKRPA*IRPHPPPPSSE
Trigger: CTCGCTACTTGGAGGTGGGGGATGGGGCCGAATTCAGGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000526564.1
CDS GCA 72 bp GACAAGCAGCGCCTCGCCTCCCTCTCGGGGTCAGGGTaGACAACCTATGGGAGGCAGCCCCGAGACCTGGCC +
Preference number: 6 (lower is better)
Translates to: DKQRLASLSGSG*TTYGRQPRDLA
Trigger: GGCCAGGTCTCGGGGCTGCCTCCCATAGGTTGTGCACCCTGACCCCGAGAGGGAGGCGAGGCGCTGCTTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS GCA 72 bp GGCGGCGGCTGTTGCCACACGATGGCCTCCTGGGCGTaGTGCTTGCGGTACAGGTCGGTGCGCTGGGTTAGG +
Preference number: 6 (lower is better)
Translates to: GGGCCHTMASWA*CLRYRSVRWVR
Trigger: CCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 72 bp TTCGGCTCCCTGCCTTTCCTGACCGTTGGCACCTGCTaGCCTGGGCCTCAGCCAGCAACGCCCAAGGCGGCC +
Preference number: 6 (lower is better)
Translates to: FGSLPFLTVGTC*PGPQPATPKAA
Trigger: GGCCGCCTTGGGCGTTGCTGGCTGAGGCCCAGGGCAGCAGGTGCCAACGGTCAGGAAAGGCAGGGAGCCGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS GCA 72 bp GCCTTCGGCTCCCTGCCTTTCCTGACCGTTGGCACCTaGTGCCCTGGGCCTCAGCCAGCAACGCCCAAGGCG +
Preference number: 6 (lower is better)
Translates to: AFGSLPFLTVGT*CPGPQPATPKA
Trigger: CGCCTTGGGCGTTGCTGGCTGAGGCCCAGGGCAGCAGGTGCCAACGGTCAGGAAAGGCAGGGAGCCGAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS CCA 72 bp TCCTGGGCGTGCTGCTTGCGGTACAGGTCGGTGCGCTaGGTTAGGCTCACCCGCCTCACCACCTTCCCGCGG +
Preference number: 6 (lower is better)
Translates to: SWACCLRYRSVR*VRLTRLTTFPR
Trigger: CCGCGGGAAGGTGGTGAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS TCA 72 bp GCCTTGGGCTGTGCCCGCGACAGGGCCCCTGCATGCTaGGCAACAGCCTCACATGAGCAGGCAGCACGGCCT +
Preference number: 6 (lower is better)
Translates to: ALGCARDRAPAC*ATASHEQAARP
Trigger: AGGCCGTGCTGCCTGCTCATGTGAGGCTGTTGCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS TCA 72 bp AGGAGCTGTGGACAGGCCCAGCCCCCAGCCTTGGCATaGGACGGCACCCAGGTAGCAGGGAGTGGGCCGTCT +
Preference number: 6 (lower is better)
Translates to: RSCGQAQPPALA*DGTQVAGSGPS
Trigger: AGACGGCCCACTCCCTGCTACCTGGGTGCCGTCTCATGCCAAGGCTGGGGGCTGGGCCTGTCCACAGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 72 bp TGGCCTCCTGGGCGTGCTGCTTGCGGTACAGGTCGGTaGGCTGGGTTAGGCTCACCCGCCTCACCACCTTCC +
Preference number: 6 (lower is better)
Translates to: WPPGRAACGTGR*AGLGSPASPPS
Trigger: GGAAGGTGGTGAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 72 bp GGCGGCTGTTGCCACACGATGGCCTCCTGGGCGTGCTaGTTGCGGTACAGGTCGGTGCGCTGGGTTAGGCTC +
Preference number: 6 (lower is better)
Translates to: GGCCHTMASWAC*LRYRSVRWVRL
Trigger: GAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 72 bp ATCTGCAGGCCCCTCTTCTACGACTCCTCATCCGTGTaGCAGTACCTCGCGCCCCGCGCCGACCGCCGCACA +
Preference number: 6 (lower is better)
Translates to: ICRPLFYDSSSV*QYLAPRADRRT
Trigger: TGTGCGGCGGTCGGCGCGGGGCGCGAGGTACTGGCACACGGATGAGGAGTCGTAGAAGAGGGGCCTGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435887.2
ENST00000526183.5
CDS GCA 72 bp TGGCCTCAGCTCACCTCACAGCAGGAGCCCTCTGCATaGAGCCCCCGCCTGAAGGACGGCTGTCCCGCACAG +
Preference number: 6 (lower is better)
Translates to: WPQLTSQQEPSA*SPRLKDGCPAQ
Trigger: CTGTGCGGGACAGCCGTCCTTCAGGCGGGGGCTGCATGCAGAGGGCTCCTGCTGTGAGGTGAGCTGAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 72 bp CTCTGCCTCCACCCACCTGCAGGCCCTTCATGGTGGTaGTCCAGCCCTCCGACCCCCAGAACAGGCCGTGCT +
Preference number: 6 (lower is better)
Translates to: LCLHPPAGPSWW*SSPPTPRTGRA
Trigger: AGCACGGCCTGTTCTGGGGGTCGGAGGGCTGGAGCACCACCATGAAGGGCCTGCAGGTGGGTGGAGGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp TCAGGTGGGGGTCGCTGCAGCTTGGCAGCAGCTCGCTaGCGCTTCAGGTCAGCCAGGGTGTGGTGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SGGGRCSLAAAR*RFRSARVWWAL
Trigger: CAAGGCCCACCACACCCTGGCTGACCTGAAGCGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCCCACCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS CCA 72 bp TCCTGGGCGTGCTGCTTGCGGTACAGGTCGGTGCGCTaGGTTAGGCTCACCCGCCTCACCACCTTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: SWACCLRYRSVR*VRLTRLTTFLG
Trigger: CCCCAGGAAGGTGGTGAGGCGGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528430.2
CDS GCA 72 bp GCTGTTGCCACACGATGGCCTCCTGGGCGTGCTGCTTaGGGTACAGGTCGGTGCGCTGGGTTAGGCTCACCC +
Preference number: 6 (lower is better)
Translates to: AVATRWPPGRAA*GTGRCAGLGSP
Trigger: GGGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 72 bp TCGTCCATCAGGGACTTTGCGTTCAGGTCGGCCCCGTaGGCCACGAGCAGCTCCACCAGGGGCACCTGTGGA +
Preference number: 6 (lower is better)
Translates to: SSIRDFAFRSAP*ATSSSTRGTCG
Trigger: TCCACAGGTGCCCCTGGTGGAGCTGCTCGTGGCGCACGGGGCCGACCTGAACGCAAAGTCCCTGATGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp TGCGCTGGGTTAGGCTCACCCGCCTCACCACCTTCCTaGGGAGGAGAGAGGAGAGGGAGTGAGGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: CAGLGSPASPPS*GGERRGSEGKG
Trigger: CCCCTTCCCCTCACTCCCTCTCCTCTCTCCTCCCCAGGAAGGTGGTGAGGCGGGTGAGCCTAACCCAGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528430.2
CDS CCA 72 bp AGCCTTGGCATGAGACGGCACCCAGGTAGCAGGGAGTaGGCCGTCTGCTGGGAGCTGCTCTGGGCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: SLGMRRHPGSRE*AVCWELLWAQP
Trigger: TGGCTGAGCCCAGAGCAGCTCCCAGCAGACGGCCCACTCCCTGCTACCTGGGTGCCGTCTCATGCCAAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp CCACAGCCGCACCGCCGCACCTACCACGGTCGGCCATaGCAGTCTCCAGGCAGTCCAGCGTCTGCTCATCAT +
Preference number: 6 (lower is better)
Translates to: PQPHRRTYHGRP*QSPGSPASAHH
Trigger: ATGATGAGCAGACGCTGGACTGCCTGGAGACTGCCATGGCCGACCGTGGTAGGTGCGGCGGTGCGGCTGTGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526183.5
ENST00000532806.1
CDS CAA 72 bp GGCTGTTGCCACACGATGGCCTCCTGGGCGTGCTGCTaGCGGTACAGGTCGGTGCGCTGGGTTAGGCTCACC +
Preference number: 6 (lower is better)
Translates to: GCCHTMASWACC*RYRSVRWVRLT
Trigger: GGTGAGCCTAACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000528430.2
CDS GCA 72 bp GCACACATCAAGGGGCGTCTCGTCCATCAGGGACTTTaGGTTCAGGTCGGCCCCGTGCGCCACGAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: AHIKGRLVHQGL*VQVGPVRHEQL
Trigger: GAGCTGCTCGTGGCGCACGGGGCCGACCTGAACGCAAAGTCCCTGATGGACGAGACGCCCCTTGATGTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000526564.1
CDS GCA 72 bp CTCCCCTCTCTGCACCCATGGAAATTAATCCCACCGTaGCCCGGGCCTCCGCTCTGGTACAGACAGGGGCCC +
Preference number: 6 (lower is better)
Translates to: LPSLHPWKLIPP*PGPPLWYRQGP
Trigger: GGGCCCCTGTCTGTACCAGAGCGGAGGCCCGGGGCACGGTGGGATTAATTTCCATGGGTGCAGAGAGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CCA 72 bp CGACCCCTGCCACCAACCCACAGCGGTGTCCACACGTaGGCTCTGTGTCCCGGCCAGTGTCTTCCACTAGAC +
Preference number: 6 (lower is better)
Translates to: RPLPPTHSGVHT*ALCPGQCLPLD
Trigger: GTCTAGTGGAAGACACTGGCCGGGACACAGAGCCCACGTGTGGACACCGCTGTGGGTTGGTGGCAGGGGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000529009.1
ENST00000529283.5
ENST00000533088.1
ENST00000533829.1
CDS CCA 72 bp TGGGCCCACATCTTCACCTGCTGGGCGCGCCGCTTCTaGGCATGCTTCAGCCGCTCCTGTGTGCTCATCCTG +
Preference number: 6 (lower is better)
Translates to: WAHIFTCWARRF*ACFSRSCVLIL
Trigger: CAGGATGAGCACACAGGAGCGGCTGAAGCATGCCCAGAAGCGGCGCGCCCAGCAGGTGAAGATGTGGGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000529009.1
CDS CCA 72 bp TGCCCACTGCTTGGGGCTTGCCTGATGGGGGCACCCTaGGCCACCCAGCCTGAAGAGACCAGGCAAGATCTG +
Preference number: 6 (lower is better)
Translates to: CPLLGACLMGAP*ATQPEETRQDL
Trigger: CAGATCTTGCCTGGTCTCTTCAGGCTGGGTGGCCCAGGGTGCCCCCATCAGGCAAGCCCCAAGCAGTGGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp CTCCGCTCTGGTACAGACAGGGGCCCACACCAGTCCTaGACGCTCCCTCCCAGGCGGGGTGCTTGCTTAGTT +
Preference number: 6 (lower is better)
Translates to: LRSGTDRGPHQS*TLPPRRGACLV
Trigger: AACTAAGCAAGCACCCCGCCTGGGAGGGAGCGTCCAGGACTGGTGTGGGCCCCTGTCTGTACCAGAGCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CAA 72 bp CGCACACATCAAGGGGCGTCTCGTCCATCAGGGACTTaGCGTTCAGGTCGGCCCCGTGCGCCACGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RTHQGASRPSGT*RSGRPRAPRAA
Trigger: AGCTGCTCGTGGCGCACGGGGCCGACCTGAACGCAAAGTCCCTGATGGACGAGACGCCCCTTGATGTGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000526564.1
CDS TCA 72 bp AGCCCTCCGACCCCCAGAACAGGCCGTGCTCCTGTGTaGGAGCAGCACTCCAACAATCCCACACCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: SPPTPRTGRAPV*EQHSNNPTPPS
Trigger: GGAGGGAGGTGTGGGATTGTTGGAGTGCTGCTCTCACACAGGAGCACGGCCTGTTCTGGGGGTCGGAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS TCA 72 bp CGCCCAGGAGGGCTCACTGCTGGACTAGACACACTTTaGGAAAGGCAGCGGTACCCCCGCCTCCACCTCCAC +
Preference number: 6 (lower is better)
Translates to: RPGGLTAGLDTL*ERQRYPRLHLH
Trigger: GTGGAGGTGGAGGCGGGGGTACCGCTGCCTTTCTCAAAGTGTGTCTAGTCCAGCAGTGAGCCCTCCTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS GCA 72 bp GTGGTGCTCCAGCCCTCCGACCCCCAGAACAGGCCGTaGTCCTGTGTGAGAGCAGCACTCCAACAATCCCAC +
Preference number: 6 (lower is better)
Translates to: VVLQPSDPQNRP*SCVRAALQQSH
Trigger: GTGGGATTGTTGGAGTGCTGCTCTCACACAGGAGCACGGCCTGTTCTGGGGGTCGGAGGGCTGGAGCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp CCTCCAGAAGGACAACACTGCTGGGCGCGCCGCTTCTaGGCATGCTTCAGCCGCTCCTGTGTGCTCATCCTG +
Preference number: 6 (lower is better)
Translates to: PPEGQHCWARRF*ACFSRSCVLIL
Trigger: CAGGATGAGCACACAGGAGCGGCTGAAGCATGCCCAGAAGCGGCGCGCCCAGCAGTGTTGTCCTTCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp TGGAAATTAATCCCACCGTGCCCCGGGCCTCCGCTCTaGTACAGACAGGGGCCCACACCAGTCCTGGACGCT +
Preference number: 6 (lower is better)
Translates to: WKLIPPCPGPPL*YRQGPTPVLDA
Trigger: AGCGTCCAGGACTGGTGTGGGCCCCTGTCTGTACCAGAGCGGAGGCCCGGGGCACGGTGGGATTAATTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CAA 90 bp GGCCCCTCTTCTACGACTCCTCATCCGTGTGCCAGTACCTTCGCCTaGGAACAAAACGCGAAGCGCCCACCGGCAGCCTTCGGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: GPSSTTPHPCASTFA*EQNAKRPPAAFGSL
Trigger: CAGGGAGCCGAAGGCTGCCGGTGGGCGCTTCGCGTTTTGTTCCAAGGCGAAGGTACTGGCACACGGATGAGGAGTCGTAGAAGAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS TCA 72 bp CGGCTCTTCCCTGACAACCTGCCAGCCCTGTGTTCATaGGCTCTCCTGGGTCCTCTGGGACCTGACCTGAGG +
Preference number: 6 (lower is better)
Translates to: RLFPDNLPALCS*ALLGPLGPDLR
Trigger: CCTCAGGTCAGGTCCCAGAGGACCCAGGAGAGCTCATGAACACAGGGCTGGCAGGTTGTCAGGGAAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS TCA 72 bp CCCAAGGAACTGGCGGACTGCAAAAAGGTGGCGAGGTaGGGACAGGGTCCTGCCCCTGGTCAGGTCCTGTCA +
Preference number: 6 (lower is better)
Translates to: PKELADCKKVAR*GQGPAPGQVLS
Trigger: TGACAGGACCTGACCAGGGGCAGGACCCTGTCCTCACCTCGCCACCTTTTTGCAGTCCGCCAGTTCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 72 bp ATGCAGGCCAGACACTGCCGGCTCCTCTTTACTCTCTaGTCCGGAGGGAGGCAGGAAGGAGTCTCAAGGGCC +
Preference number: 6 (lower is better)
Translates to: MQARHCRLLFTL*SGGRQEGVSRA
Trigger: GGCCCTTGAGACTCCTTCCTGCCTCCCTCCGGAGCAGAGAGTAAAGAGGAGCCGGCAGTGTCTGGCCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS GCA 72 bp GACAGGGTCCTGCCCCTGGTCAGGTCCTGTCAACTGTaGTTCGGCCCAGGACCCAGGGAAGGACAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: DRVLPLVRSCQL*FGPGPREGQGR
Trigger: TCTTCCTTGTCCTTCCCTGGGTCCTGGGCCGAAGCACAGTTGACAGGACCTGACCAGGGGCAGGACCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CAA 72 bp ACGCCCAGGAGGGCTCACTGCTGGACTAGACACACTTaGAGAAAGGCAGCGGTACCCCCGCCTCCACCTCCA +
Preference number: 6 (lower is better)
Translates to: TPRRAHCWTRHT*RKAAVPPPPPP
Trigger: TGGAGGTGGAGGCGGGGGTACCGCTGCCTTTCTCAAAGTGTGTCTAGTCCAGCAGTGAGCCCTCCTGGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS GCA 72 bp GAGGGAGGCAGGAAGGAGTCTCAAGGGCCACCACAGTaGCTCTTCCCCCAAGACTCCAGAGCACCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: EGGRKESQGPPQ*LFPQDSRAPEV
Trigger: CACTTCTGGTGCTCTGGAGTCTTGGGGGAAGAGGCACTGTGGTGGCCCTTGAGACTCCTTCCTGCCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp CAGGGTGCACAACCTATGGGAGGCAGCCCCGAGACCTaGCCGGCCTCAGTGCAGGGTCTGAAACTAATTACC +
Preference number: 6 (lower is better)
Translates to: QGAQPMGGSPET*PASVQGLKLIT
Trigger: GGTAATTAGTTTCAGACCCTGCACTGAGGCCGGCCAGGTCTCGGGGCTGCCTCCCATAGGTTGTGCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
CDS CCA 72 bp AACTGGGGCGCCAAGACGCCCAGGAGGGCTCACTGCTaGACTAGACACACTTTGAGAAAGGCAGCGGTACCC +
Preference number: 6 (lower is better)
Translates to: NWGAKTPRRAHC*TRHTLRKAAVP
Trigger: GGGTACCGCTGCCTTTCTCAAAGTGTGTCTAGTCCAGCAGTGAGCCCTCCTGGGCGTCTTGGCGCCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CCA 72 bp CTACGACTCCTCATCCGTGTGCCAGTACCTTCGCCTTaGAACAAAACGCGAAGCGCCCACCGGCAGCCTTCG +
Preference number: 6 (lower is better)
Translates to: LRLLIRVPVPSP*NKTRSAHRQPS
Trigger: CGAAGGCTGCCGGTGGGCGCTTCGCGTTTTGTTCCAAGGCGAAGGTACTGGCACACGGATGAGGAGTCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS GCA 72 bp TTTGAAGACTCCACCGTTCATGTGCCTGATGGCACCTaGTCGACCCCTGCCACCAACCCACAGCGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: FEDSTVHVPDGT*STPATNPQRCP
Trigger: TGGACACCGCTGTGGGTTGGTGGCAGGGGTCGAGCAGGTGCCATCAGGCACATGAACGGTGGAGTCTTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000529009.1
ENST00000529283.5
ENST00000533088.1
ENST00000533829.1
CDS GCA 72 bp CAGCTGCTCACACCTTTGAAGACTCCACCGTTCATGTaGCTGATGGCACCTGCTCGACCCCTGCCACCAACC +
Preference number: 6 (lower is better)
Translates to: QLLTPLKTPPFM*LMAPARPLPPT
Trigger: GGTTGGTGGCAGGGGTCGAGCAGGTGCCATCAGGCACATGAACGGTGGAGTCTTCAAAGGTGTGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000529009.1
ENST00000529283.5
ENST00000533088.1
CDS GCA 72 bp AGCAACTGGGGCGCCAAGACGCCCAGGAGGGCTCACTaGTGGACTAGACACACTTTGAGAAAGGCAGCGGTA +
Preference number: 6 (lower is better)
Translates to: SNWGAKTPRRAH*WTRHTLRKAAV
Trigger: TACCGCTGCCTTTCTCAAAGTGTGTCTAGTCCAGCAGTGAGCCCTCCTGGGCGTCTTGGCGCCCCAGTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CCA 72 bp ACTAGGTTTTTCTGCAGGCTCCTGGGGGTCCACTCATaGCCTCAGCTCACCTCACAGCAGGAGCCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: TRFFCRLLGVHS*PQLTSQQEPSA
Trigger: TGCAGAGGGCTCCTGCTGTGAGGTGAGCTGAGGCCATGAGTGGACCCCCAGGAGCCTGCAGAAAAACCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CCA 72 bp AAGACTCCAGAGCACCAGAAGTGGAACCCACACAGCTaGGGCTGCAAGCGTGGGGCACAGGTGAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: KTPEHQKWNPHS*GCKRGAQVRRR
Trigger: TCTTCTCCTCACCTGTGCCCCACGCTTGCAGCCCCAGCTGTGTGGGTTCCACTTCTGGTGCTCTGGAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526183.5
CDS CAA 72 bp TCTACGACTCCTCATCCGTGTGCCAGTACCTTCGCCTaGGAACAAAACGCGAAGCGCCCACCGGCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: STTPHPCASTFA*EQNAKRPPAAF
Trigger: GAAGGCTGCCGGTGGGCGCTTCGCGTTTTGTTCCAAGGCGAAGGTACTGGCACACGGATGAGGAGTCGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS CAA 90 bp GCAGCATGCAGAGGCGTCCAGCACTCACTGTCACAGGCATTGATGTaGGCCCCAGCCTCCAGGAGCTGCTGCACCATCTCTCGGAAATCA +
Preference number: 6 (lower is better)
Translates to: AACRGVQHSLSQALM*APASRSCCTISRKS
Trigger: TGATTTCCGAGAGATGGTGCAGCAGCTCCTGGAGGCTGGGGCCAACATCAATGCCTGTGACAGTGAGTGCTGGACGCCTCTGCATGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000532806.1
CDS GCA 72 bp AACCCCATCTCTGCTTTGAAGACTCCACCGTTCATGTaGCTGATGGCACCTGCTCGACCCCTGCCACCAACC +
Preference number: 6 (lower is better)
Translates to: NPISALKTPPFM*LMAPARPLPPT
Trigger: GGTTGGTGGCAGGGGTCGAGCAGGTGCCATCAGGCACATGAACGGTGGAGTCTTCAAAGCAGAGATGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533829.1
CDS GCA 72 bp CTTCCACTAGACGACAGGCTTGCTGAGAGCACAATCTaGAGGCCCCTCTTCTACGACTCCTCATCCGTGTGC +
Preference number: 6 (lower is better)
Translates to: LPLDDRLAESTI*RPLFYDSSSVC
Trigger: GCACACGGATGAGGAGTCGTAGAAGAGGGGCCTGCAGATTGTGCTCTCAGCAAGCCTGTCGTCTAGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292539.8
ENST00000435887.2
ENST00000526183.5
ENST00000529283.5
ENST00000533088.1
CDS GCA 72 bp CACCAGTCCTGGACGCTCCCTCCCAGGCGGGGTGCTTaGTTAGTTAGTAATTCTTGCCCTGATCCCAATTCC +
Preference number: 6 (lower is better)
Translates to: HQSWTLPPRRGA*LVSNSCPDPNS
Trigger: GGAATTGGGATCAGGGCAAGAATTACTAACTAAGCAAGCACCCCGCCTGGGAGGGAGCGTCCAGGACTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS GCA 72 bp ATCTGCAGGCCCCTCTTCTACGACTCCTCATCCGTGTaGCAGTACCTTCGCCTTGGAACAAAACGCGAAGCG +
Preference number: 6 (lower is better)
Translates to: ICRPLFYDSSSV*QYLRLGTKREA
Trigger: CGCTTCGCGTTTTGTTCCAAGGCGAAGGTACTGGCACACGGATGAGGAGTCGTAGAAGAGGGGCCTGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533088.1
CDS TCA 72 bp AAGGCTAACTTTGCTCTGTCTCCCCTAAGCCTAGAATaGCTCCGTACACGGCTCCCCTCTCTGCACCCATGG +
Preference number: 6 (lower is better)
Translates to: KANFALSPLSLE*LRTRLPSLHPW
Trigger: CCATGGGTGCAGAGAGGGGAGCCGTGTACGGAGTCATTCTAGGCTTAGGGGAGACAGAGCAAAGTTAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS TCA 72 bp CTTCTACGACTCCTCATCCGTGTGCCAGTACCCCAGTaGGACTCCACTTTCTCCTTCAGCCTAGCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: LLRLLIRVPVPQ*DSTFSFSLAPR
Trigger: CCTTGGAGCTAGGCTGAAGGAGAAAGTGGAGTCTCACTGGGGTACTGGCACACGGATGAGGAGTCGTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529283.5
CDS GCA 72 bp ATCTGCAGGCCCCTCTTCTACGACTCCTCATCCGTGTaGCAGTACCCCAGTGAGACTCCACTTTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: ICRPLFYDSSSV*QYPSETPLSPS
Trigger: TGAAGGAGAAAGTGGAGTCTCACTGGGGTACTGGCACACGGATGAGGAGTCGTAGAAGAGGGGCCTGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529283.5
CDS TCA 72 bp TGCTTAGTTAGTAATTCTTGCCCTGATCCCAATTCCTaGGGGGTGGTCCGGACGCCCCGCACTACAAGTGAG +
Preference number: 6 (lower is better)
Translates to: CLVSNSCPDPNS*GVVRTPRTTSE
Trigger: CTCACTTGTAGTGCGGGGCGTCCGGACCACCCCTCAGGAATTGGGATCAGGGCAAGAATTACTAACTAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CAA 90 bp ACTTTCTCCTTCAGCCTAGCTCCAAGGCCCACACAAAGCTTAAGTTaGGGTAAGTCCCTTCTCTGCGGCCTCGATTTCCTCATCTCGCGC +
Preference number: 6 (lower is better)
Translates to: TFSFSLAPRPTQSLS*GKSLLCGLDFLISR
Trigger: GCGCGAGATGAGGAAATCGAGGCCGCAGAGAAGGGACTTACCCAAACTTAAGCTTTGTGTGGGCCTTGGAGCTAGGCTGAAGGAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526643.1
ENST00000529283.5
CDS GCA 72 bp GAGACCATCCTAGCTAACAGGGTGAAACCCCATCTCTaGTTTGAAGACTCCACCGTTCATGTGCCTGATGGC +
Preference number: 6 (lower is better)
Translates to: ETILANRVKPHL*FEDSTVHVPDG
Trigger: GCCATCAGGCACATGAACGGTGGAGTCTTCAAAGCAGAGATGGGGTTTCACCCTGTTAGCTAGGATGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533829.1
CDS CCA 72 bp TTAGTAATTCTTGCCCTGATCCCAATTCCTGAGGGGTaGTCCGGACGCCCCGCACTACAAGTGAGGTCATTT +
Preference number: 6 (lower is better)
Translates to: LVILALIPIPEG*SGRPALQVRSF
Trigger: AAATGACCTCACTTGTAGTGCGGGGCGTCCGGACCACCCCTCAGGAATTGGGATCAGGGCAAGAATTACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526643.1
CDS CAA 72 bp TTCAGCCTAGCTCCAAGGCCCACACAAAGCTTAAGTTaGGGTAAGTCCCTTCTCTGCGGCCTCGATTTCCTC +
Preference number: 6 (lower is better)
Translates to: FSLAPRPTQSLS*GKSLLCGLDFL
Trigger: GAGGAAATCGAGGCCGCAGAGAAGGGACTTACCCAAACTTAAGCTTTGTGTGGGCCTTGGAGCTAGGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526643.1
ENST00000529283.5