Pregenerated sensors for PPP1R15A (Homo sapiens)
Ensembl gene IDs: ENSG00000087074Ensembl transcript IDs: ENST00000200453.6, ENST00000600406.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCGATCCCGAGCAAGCTGCTCCCAGGGGCCCTGGCGGGCGGCCTaGGCCGGCCCTGCCCAGACAGCCAGGAAATGGACAGTGACCTTC | + |
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Preference number: 1 (lower is better) Translates to: LRSRASCSQGPWRAA*AGPAQTARKWTVTF Trigger: GAAGGTCACTGTCCATTTCCTGGCTGTCTGGGCAGGGCCGGCCCAGGCCGCCCGCCAGGGCCCCTGGGAGCAGCTTGCTCGGGATCGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CCA 90 bp | GCAGCCGCTGCAGCAGCAGACGAGCGGGAAGGTGTGGCCACAGCTTaGCTCAAGGGCGTGGTCTGGACTGGGGACGAAGGGACAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: AAAAAADEREGVATA*LKGVVWTGDEGTEE Trigger: CTCCTCTGTCCCTTCGTCCCCAGTCCAGACCACGCCCTTGAGCCAAGCTGTGGCCACACCTTCCCGCTCGTCTGCTGCTGCAGCGGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR GCA 90 bp | CAGTTGGTCTCAGCCACGCCTCCCACTGAGGTCCAGGGCAGCCGCTaGAGCAGCAGACGAGCGGGAAGGTGTGGCCACAGCTTGGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: QLVSATPPTEVQGSR*SSRRAGRCGHSLAQ Trigger: TTGAGCCAAGCTGTGGCCACACCTTCCCGCTCGTCTGCTGCTGCAGCGGCTGCCCTGGACCTCAGTGGGAGGCGTGGCTGAGACCAACTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CCA 90 bp | GACGAGCGGGAAGGTGTGGCCACAGCTTGGCTCAAGGGCGTGGTCTaGACTGGGGACGAAGGGACAGAGGAGGAAGGCAAGGTCTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: DEREGVATAWLKGVV*TGDEGTEEEGKVWV Trigger: CACCCAGACCTTGCCTTCCTCCTCTGTCCCTTCGTCCCCAGTCCAGACCACGCCCTTGAGCCAAGCTGTGGCCACACCTTCCCGCTCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CCA 90 bp | CAGCAGACGAGCGGGAAGGTGTGGCCACAGCTTGGCTCAAGGGCGTaGTCTGGACTGGGGACGAAGGGACAGAGGAGGAAGGCAAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: QQTSGKVWPQLGSRA*SGLGTKGQRRKARS Trigger: AGACCTTGCCTTCCTCCTCTGTCCCTTCGTCCCCAGTCCAGACCACGCCCTTGAGCCAAGCTGTGGCCACACCTTCCCGCTCGTCTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR GCA 90 bp | CAGACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTaGGGGCAGACATGGGGACACAGGCAGGAGATGCACACAGCCACG | + |
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Preference number: 1 (lower is better) Translates to: QTARKWTVTFSEKRT*GQTWGHRQEMHTAT Trigger: CGTGGCTGTGTGCATCTCCTGCCTGTGTCCCCATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CCA 90 bp | AAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACATaGGGACACAGGCAGGAGATGCACACAGCCACGGGAATCCGGATG | + |
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Preference number: 1 (lower is better) Translates to: KWTVTFSEKRTCGQT*GHRQEMHTATGIRM Trigger: CATCCGGATTCCCGTGGCTGTGTGCATCTCCTGCCTGTGTCCCCATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR GCA 90 bp | AGGGATTGCGTGACAGCGTACACAGCCTTCTCCATGGAGATGACATaGAACCCTCTGCAACATACAGGGACCCAGAAGTCTCGGCCCCCA | + |
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Preference number: 1 (lower is better) Translates to: RDCVTAYTAFSMEMT*NPLQHTGTQKSRPP Trigger: TGGGGGCCGAGACTTCTGGGTCCCTGTATGTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTGTACGCTGTCACGCAATCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCTGGGTGATGCGGCGTGCGAAGCGGCTGCGATCCCGAGCAAGCTGCTCCCCTCCCCCAGGGGCCTaGCCTCTTACAAGGGATTGC | + |
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Preference number: 2 (lower is better) Translates to: WAWVMRRAKRLRSRASCSPPPGA*PLTRDC Trigger: GCAATCCCTTGTAAGAGGCCAGGCCCCTGGGGGAGG...GGAGCAGCTTGCTCGGGATCGCAGCCGCTTCGCACGCCGCATCACCCAGGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGGCTAAAGGTGGGTTCCTGAGGCGTGCCCAGGCTCTGGCCCGGGCAGCAAGCTCCTCCTGGGCCTaGGTGATGCGGCGTGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: MGAKGGFLRRAQALARAASSSWA*VMRRAK Trigger: CTTCGCACGCCGCATCACCCAGGCCCAGGAGGAGCT...TGCTGCCCGGGCCAGAGCCTGGGCACGCCTCAGGAACCCACCTTTAGCCCCCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CAA 90 bp | GGCAGCCGCTGCAGCAGCAGACGAGCGGGAAGGTGTGGCCACAGCTaGGCTCAAGGGCGTGGTCTGGACTGGGGACGAAGGGACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSRCSSRRAGRCGHS*AQGRGLDWGRRDRG Trigger: TCCTCTGTCCCTTCGTCCCCAGTCCAGACCACGCCCTTGAGCCAAGCTGTGGCCACACCTTCCCGCTCGTCTGCTGCTGCAGCGGCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR TCA 90 bp | CAAACCAGTTGGTCTCAGCCACGCCTCCCACTGAGGTCCAGGGCAGCCGCTGCACTAAAGGTGGGTTCCTaGGGCGTGCCCAGGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QTSWSQPRLPLRSRAAAALKVGS*GVPRLW Trigger: CCAGAGCCTGGGCACGCCTCAGGAACCCACCTTTAG...TGCAGCGGCTGCCCTGGACCTCAGTGGGAGGCGTGGCTGAGACCAACTGGTTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACATGGCCACGGGAATCCGGATaGGGAGGGCGGGGAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ARKWTVTFSEKRTCGQTWPRESG*GGRGRE Trigger: CTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGG...CCATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR CCA 90 bp | CAAACCAGTTGGTCTCAGCCACGCCTCCCACTGAGGTCCAGGGCAGCCGCTGCACTTGGCTCAAGGGCGTaGTCTGGACTGGGGACGAAG | + |
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Preference number: 2 (lower is better) Translates to: QTSWSQPRLPLRSRAAAALGSRA*SGLGTK Trigger: CTTCGTCCCCAGTCCAGACCACGCCCTTGAGCCAAG...TGCAGCGGCTGCCCTGGACCTCAGTGGGAGGCGTGGCTGAGACCAACTGGTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR CCA 90 bp | ATGCACACAGCCACGGGAATCCGGATGGGGAGGGCGGGGAAGAGAGAGAGAGAAGAAGAGGTGGTTTCCTaGGGCTGCTGTGAGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: MHTATGIRMGRAGKREREEEVVS*GCCEPQ Trigger: CTGTGGCTCACAGCAGCCCCAGGAAACCACCTCTTC...TTCTCTCTCTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR TCA 90 bp | ATGCACACAGCCACGGGAATCCGGATGGGGAGGGCGGGGAAGAGAGAGAGAGAAGTGATGTCAGGAGTTTaGGACCAGCCTGGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: MHTATGIRMGRAGKREREVMSGV*DQPGQH Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACATCAC...TTCTCTCTCTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR TCA 90 bp | ATGGGGGCTAAAGGTGGGTTCCTGAGGCGTGCCCAGGCTCTGGCCCGGGCAGCAGATTCTCTATCTATCTaGCTCACTGAAGGAAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: MGAKGGFLRRAQALARAADSLSI*LTEGRG Trigger: ACCTCTTCCTTCAGTGAGTCAGATAGATAGAGAATC...TGCTGCCCGGGCCAGAGCCTGGGCACGCCTCAGGAACCCACCTTTAGCCCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACATGGTTACAAGGGATTGCGTaGCAGCGTACACAGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: ARKWTVTFSEKRTCGQTWLQGIA*QRTQPS Trigger: AGAAGGCTGTGTACGCTGTCACGCAATCCCTTGTAA...CCATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGTTTGGGAGGCTGAGATaGGTGGATCACGTGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: QTARKWTVTFSEKRTCGQFGRLR*VDHVMS Trigger: TGACATCACGTGATCCACCCATCTCAGCCTCCCAAA...CTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGATCTATCTGACTCACTaGAGGAAGAGGTGGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QTARKWTVTFSEKRTCGQIYLTH*RKRWFP Trigger: AGGAAACCACCTCTTCCTTCAGTGAGTCAGATAGAT...CTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR TCA 90 bp | CACAGCCTTCTCCATGGAGATGACATGCAACCCTCTGCAACATACAGGGACCCAGATGGGTGGATCACGTaGTGTCAGGAGTTTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: HSLLHGDDMQPSATYRDPDGWIT*CQEFET Trigger: GGTCTCAAACTCCTGACATCACGTGATCCACCCATC...TGGGTCCCTGTATGTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR TCA 90 bp | TATCTGGCTAGTCACTTGCCTGTCACTGTCACGGGATTCTCTATCTATCTGACTCCTTCTCCATGGAGATaGCATGCAACCCTCTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: YLASHLPVTVTGFSIYLTPSPWR*HATLCN Trigger: GTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGG...AGTCAGATAGATAGAGAATCCCGTGACAGTGACAGGCAAGTGACTAGCCAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR GCA 72 bp | TCAGCCACGCCTCCCACTGAGGTCCAGGGCAGCCGCTaGAGCAGCAGACGAGCGGGAAGGTGTGGCCACAGC | + |
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Preference number: 3 (lower is better) Translates to: SATPPTEVQGSR*SSRRAGRCGHS Trigger: GCTGTGGCCACACCTTCCCGCTCGTCTGCTGCTGCAGCGGCTGCCCTGGACCTCAGTGGGAGGCGTGGCTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CCA 72 bp | GGGCAGCCGCTGCAGCAGCAGACGAGCGGGAAGGTGTaGCCACAGCTTGGCTCAAGGGCGTGGTCTGGACTG | + |
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Preference number: 3 (lower is better) Translates to: GQPLQQQTSGKV*PQLGSRAWSGL Trigger: CAGTCCAGACCACGCCCTTGAGCCAAGCTGTGGCCACACCTTCCCGCTCGTCTGCTGCTGCAGCGGCTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR TCA 72 bp | GGGCCGGCCCTGCCCAGACAGCCAGGAAATGGACAGTaGCCTTCTCGGAGAAGCGCACCTGCGGGCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: GPALPRQPGNGQ*PSRRSAPAGRH Trigger: ATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTGGGCAGGGCCGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CCA 72 bp | GTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACATaGGGACACAGGCAGGAGATGCACACAGCCACGGGA | + |
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Preference number: 3 (lower is better) Translates to: VTFSEKRTCGQT*GHRQEMHTATG Trigger: TCCCGTGGCTGTGTGCATCTCCTGCCTGTGTCCCCATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CCA 72 bp | AGCGGGAAGGTGTGGCCACAGCTTGGCTCAAGGGCGTaGTCTGGACTGGGGACGAAGGGACAGAGGAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SGKVWPQLGSRA*SGLGTKGQRRK Trigger: CTTCCTCCTCTGTCCCTTCGTCCCCAGTCCAGACCACGCCCTTGAGCCAAGCTGTGGCCACACCTTCCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR GCA 72 bp | CCTCCTCCCCCAGGGGCCTGGCCTCTTACAAGGGATTaGGTGACAGCGTACACAGCCTTCTCCATGGAGATG | + |
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Preference number: 3 (lower is better) Translates to: PPPPGAWPLTRD*VTAYTAFSMEM Trigger: CATCTCCATGGAGAAGGCTGTGTACGCTGTCACGCAATCCCTTGTAAGAGGCCAGGCCCCTGGGGGAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR CCA 72 bp | ACAGGCAGGAGATGCACACAGCCACGGGAATCCGGATaGGGAGGGCGGGGAAGAGAGAGAGAGAAGCAAACA | + |
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Preference number: 3 (lower is better) Translates to: TGRRCTQPRESG*GGRGREREKQT Trigger: TGTTTGCTTCTCTCTCTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCATCTCCTGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| 3UTR-3UTR CAA 90 bp | GACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACGCCTCTTACAAGGGATaGCGTGACAGCGTACACAGC | + |
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Preference number: 3 (lower is better) Translates to: DSQEMDSDLLGEAHLRADASYKG*RDSVHS Trigger: GCTGTGTACGCTGTCACGCAATCCCTTGTAAGAGGC...GTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR TCA 90 bp | TGGGCCTGGGTGATGCGGCGTGCGAAGCGGCTGCGATCCCGAGCAAGCTGCTCCAGCCACGCCTCCCACTaGGGTCCAGGGCAGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: WAWVMRRAKRLRSRASCSSHASH*GPGQPL Trigger: CAGCGGCTGCCCTGGACCTCAGTGGGAGGCGTGGCT...GGAGCAGCTTGCTCGGGATCGCAGCCGCTTCGCACGCCGCATCACCCAGGCCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | TGGGCCTGGGTGATGCGGCGTGCGAAGCGGCTGCGATCCCGAGCAAGCTGCTCCGGGCTCAGCTCCTCCTaGGCCTGGGTGATGCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: WAWVMRRAKRLRSRASCSGLSSS*AWVMRR Trigger: ACGCCGCATCACCCAGGCCCAGGAGGAGCTGAGCCC...GGAGCAGCTTGCTCGGGATCGCAGCCGCTTCGCACGCCGCATCACCCAGGCCCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR TCA 90 bp | ATGGGGGCTAAAGGTGGGTTCCTGAGGCGTGCCCAGGCTCTGGCCCGGGCAGCATCAGGGTCCGGATCATaGGTAGGGGTTTCTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: MGAKGGFLRRAQALARAASGSGS*VGVSGR Trigger: GCGCCCAGAAACCCCTACTCATGATCCGGACCCTGA...TGCTGCCCGGGCCAGAGCCTGGGCACGCCTCAGGAACCCACCTTTAGCCCCCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR GCA 90 bp | CAGACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGTGGGTTCCTGAGGCGTaGCCAGGCTCTGGCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: QTARKWTVTFSEKRTCGQWVPEA*PGSGPG Trigger: GCCCGGGCCAGAGCCTGGGCACGCCTCAGGAACCCA...CTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | ATGCACACAGCCACGGGAATCCGGATGGGGAGGGCGGGGAAGAGAGAGAGAGAACCCCAGCCCCTGAAGTaGGCCCTCTGGTCCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: MHTATGIRMGRAGKREREPQPLK*ALWSGW Trigger: CCACCCGGACCAGAGGGCCCACTTCAGGGGCTGGGG...TTCTCTCTCTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | ATGGGGGCTAAAGGTGGGTTCCTGAGGCGTGCCCAGGCTCTGGCCCGGGCAGCAACGAGCGGGAAGGTGTaGCCACAGCTTGGCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: MGAKGGFLRRAQALARAATSGKV*PQLGSR Trigger: CCTTGAGCCAAGCTGTGGCCACACCTTCCCGCTCGT...TGCTGCCCGGGCCAGAGCCTGGGCACGCCTCAGGAACCCACCTTTAGCCCCCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR TCA 90 bp | CGGCCCCCAGCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGACCTCCTGGGCCTGGGTaGTGCGGCGTGCGAAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RPPAPFLSKTQESGLSARPPGPG*CGVRSG Trigger: GCCGCTTCGCACGCCGCATCACCCAGGCCCAGGAGG...TCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGCTGGGGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR GCA 90 bp | CAGACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGGGCCTGGGCCGGCCCTaGCCAGACAGCCAGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: QTARKWTVTFSEKRTCGQGLGRP*PDSQEM Trigger: CATTTCCTGGCTGTCTGGGCAGGGCCGGCCCAGGCC...CTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR GCA 90 bp | GCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACATGGGTCCAGGGCAGCCGCTaGAGCAGCAGACGAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: ARKWTVTFSEKRTCGQTWVQGSR*SSRRAG Trigger: TCCCGCTCGTCTGCTGCTGCAGCGGCTGCCCTGGAC...CCATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR GCA 90 bp | CGGCCCCCAGCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGACGATCCCGAGCAAGCTaGTCCCAGGGGCCCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RPPAPFLSKTQESGLSARRSRAS*SQGPWR Trigger: CCGCCAGGGCCCCTGGGAGCAGCTTGCTCGGGATCG...TCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGCTGGGGGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | CCTCCTCCCCCAGGGGCCTGGCCTCTTACAAGGGATTGCGTGACAGCGTACACACCTCCCCCAGGGGCCTaGCCTCTTACAAGGGATTGC | + |
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Preference number: 4 (lower is better) Translates to: PPPPGAWPLTRDCVTAYTPPPGA*PLTRDC Trigger: GCAATCCCTTGTAAGAGGCCAGGCCCCTGGGGGAGG...TGTGTACGCTGTCACGCAATCCCTTGTAAGAGGCCAGGCCCCTGGGGGAGGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | GACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACCCACGGGAATCCGGATaGGGAGGGCGGGGAAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: DSQEMDSDLLGEAHLRADPRESG*GGRGRE Trigger: CTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGG...GTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR TCA 90 bp | GACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACCTAAAGGTGGGTTCCTaGGGCGTGCCCAGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: DSQEMDSDLLGEAHLRADLKVGS*GVPRLW Trigger: CCAGAGCCTGGGCACGCCTCAGGAACCCACCTTTAG...GTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | GCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACATGGGAGGAAGGCAAGGTCTaGGTGAGGGCAGGGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: ARKWTVTFSEKRTCGQTWEEGKV*VRAGMG Trigger: CCCCATCCCTGCCCTCACCCAGACCTTGCCTTCCTC...CCATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | AGACATGGGGACACAGGCAGGAGATGCACACAGCCACGGGAATCCGGATGGGGAGGGCGTGGTCTGGACTaGGGACGAAGGGACAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RHGDTGRRCTQPRESGWGGRGLD*GRRDRG Trigger: TCCTCTGTCCCTTCGTCCCCAGTCCAGACCACGCCC...TCCCCATCCGGATTCCCGTGGCTGTGTGCATCTCCTGCCTGTGTCCCCATGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR TCA 90 bp | GACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACGGCAGAGGTTGGCAGTaGGCCAAGATCATGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: DSQEMDSDLLGEAHLRADGRGWQ*AKIMPL Trigger: CAGCGGCATGATCTTGGCTCACTGCCAACCTCTGCC...GTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | CAGACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGCTCAAGGGCGTGGTCTaGACTGGGGACGAAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: QTARKWTVTFSEKRTCGQLKGVV*TGDEGT Trigger: TGTCCCTTCGTCCCCAGTCCAGACCACGCCCTTGAG...CTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS-3UTR CCA 90 bp | GACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACACCTGCGGGCAGACATaGGGACACAGGCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DSQEMDSDLLGEAHLRADTCGQT*GHRQEM Trigger: CATCTCCTGCCTGTGTCCCCATGTCTGCCCGCAGGT...GTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| 3UTR CAA 72 bp | CCCTCCTCCCCCAGGGGCCTGGCCTCTTACAAGGGATaGCGTGACAGCGTACACAGCCTTCTCCATGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSPRGLASYKG*RDSVHSLLHGD Trigger: ATCTCCATGGAGAAGGCTGTGTACGCTGTCACGCAATCCCTTGTAAGAGGCCAGGCCCCTGGGGGAGGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR GCA 90 bp | ATGGGGACACAGGCAGGAGATGCACACAGCCACGGGAATCCGGATGGGGAGGGCCCTCTTACAAGGGATTaGGTGACAGCGTACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MGTQAGDAHSHGNPDGEGPLTRD*VTAYTA Trigger: GGCTGTGTACGCTGTCACGCAATCCCTTGTAAGAGG...GCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCATCTCCTGCCTGTGTCCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | ATGCACACAGCCACGGGAATCCGGATGGGGAGGGCGGGGAAGAGAGAGAGAGAACTCCAGGTACATAGATaGCCACTCGGAAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MHTATGIRMGRAGKRERELQVHR*PLGRGR Trigger: CCTGCCCCTTCCGAGTGGCCATCTATGTACCTGGAG...TTCTCTCTCTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | CGGCCCCCAGCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGAGGAGGGATGTGGGTCTaGCTCAGCTTCTCCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPPAPFLSKTQESGLSARGGMWV*LSFSQG Trigger: GCCTTGGGAGAAGCTGAGTCAGACCCACATCCCTCC...TCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGCTGGGGGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCCCCCAGGGGCCTGGCCTCTTACAAGGGATTGCGTGACAGCGTACACACCTTCTCCATGGAGATaGCATGCAACCCTCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPGAWPLTRDCVTAYTPSPWR*HATLCN Trigger: GTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGG...TGTGTACGCTGTCACGCAATCCCTTGTAAGAGGCCAGGCCCCTGGGGGAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | ATGGGGGCTAAAGGTGGGTTCCTGAGGCGTGCCCAGGCTCTGGCCCGGGCAGCAATCTATCTGACTCACTaGAGGAAGAGGTGGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MGAKGGFLRRAQALARAAIYLTH*RKRWFP Trigger: AGGAAACCACCTCTTCCTTCAGTGAGTCAGATAGAT...TGCTGCCCGGGCCAGAGCCTGGGCACGCCTCAGGAACCCACCTTTAGCCCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR GCA 90 bp | ATGGGGACACAGGCAGGAGATGCACACAGCCACGGGAATCCGGATGGGGAGGGCCTTCAAGAAAGCACTTaGAGGGGGTGTGGAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGTQAGDAHSHGNPDGEGLQEST*RGCGSR Trigger: TCTGCTTCCACACCCCCTGCAAGTGCTTTCTTGAAG...GCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCATCTCCTGCCTGTGTCCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | CACAGCCTTCTCCATGGAGATGACATGCAACCCTCTGCAACATACAGGGACCCAGCCCTCTGGTCCGGGTaGGAGGGATGTGGGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLLHGDDMQPSATYRDPALWSG*EGCGSD Trigger: GTCAGACCCACATCCCTCCCACCCGGACCAGAGGGC...TGGGTCCCTGTATGTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | GACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACATGAGTAGGGGTTTCTaGGCGCTTGAGCCGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSQEMDSDLLGEAHLRADMSRGF*ALEPPL Trigger: CAAAGGCGGCTCAAGCGCCCAGAAACCCCTACTCAT...GTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | TGCGTGACAGCGTACACAGCCTTCTCCATGGAGATGACATGCAACCCTCTGCAAAGCTCCTCCTGGGCCTaGGTGATGCGGCGTGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVTAYTAFSMEMTCNPLQSSSWA*VMRRAK Trigger: CTTCGCACGCCGCATCACCCAGGCCCAGGAGGAGCT...TTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTGTACGCTGTCACGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | GCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACATGGGTGATGTCAGGAGTTTaGGACCAGCCTGGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: ARKWTVTFSEKRTCGQTWVMSGV*DQPGQH Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACATCAC...CCATGTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | GACAGCCAGGAAATGGACAGTGACCTTCTCGGAGAAGCGCACCTGCGGGCAGACCACTTGCAGGGGGTGTaGAAGCAGAAGTCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSQEMDSDLLGEAHLRADHLQGV*KQKSQL Trigger: AAGCTGAGACTTCTGCTTCCACACCCCCTGCAAGTG...GTCTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | CACAGCCTTCTCCATGGAGATGACATGCAACCCTCTGCAACATACAGGGACCCACTGAAGTGGGCCCTCTaGTCCGGGTGGGAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HSLLHGDDMQPSATYRDPLKWAL*SGWEGC Trigger: ACATCCCTCCCACCCGGACCAGAGGGCCCACTTCAG...TGGGTCCCTGTATGTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | AGACATGGGGACACAGGCAGGAGATGCACACAGCCACGGGAATCCGGATGGGGACAGACAGCCAGGAAATaGACAGTGACCTTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RHGDTGRRCTQPRESGWGQTARK*TVTFSE Trigger: CTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTG...TCCCCATCCGGATTCCCGTGGCTGTGTGCATCTCCTGCCTGTGTCCCCATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | GCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGATGTGGTAGCGGGTTTCTGGGCGCTTaGGCCGCCTTTGCAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: APFLSKTQESGLSARCGSGFLGA*AAFAVG Trigger: TCCGACTGCAAAGGCGGCTCAAGCGCCCAGAAACCC...GCTACCACATCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR GCA 90 bp | CAAACCAGTTGGTCTCAGCCACGCCTCCCACTGAGGTCCAGGGCAGCCGCTGCATCCATGGAGATGACATaGAACCCTCTGCAACATACA | + |
|
Preference number: 4 (lower is better) Translates to: QTSWSQPRLPLRSRAAAASMEMT*NPLQHT Trigger: TGTATGTTGCAGAGGGTTGCATGTCATCTCCATGGA...TGCAGCGGCTGCCCTGGACCTCAGTGGGAGGCGTGGCTGAGACCAACTGGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR GCA 90 bp | TATCTGGCTAGTCACTTGCCTGTCACTGTCACGGGATTCTCTATCTATCTGACTGGCGTGCGAAGCGGCTaGGATCCCGAGCAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLASHLPVTVTGFSIYLTGVRSG*DPEQAA Trigger: AGCAGCTTGCTCGGGATCGCAGCCGCTTCGCACGCC...AGTCAGATAGATAGAGAATCCCGTGACAGTGACAGGCAAGTGACTAGCCAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR GCA 90 bp | GCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGATGTGGTAGCGACACAGGCAGGAGATaGACACAGCCACGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: APFLSKTQESGLSARCGSDTGRR*TQPRES Trigger: GGATTCCCGTGGCTGTGTGCATCTCCTGCCTGTGTC...GCTACCACATCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGATGTGGTAGCAGCCCAGGGAGGCGGTaGCTTCTCTCCAGGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: APFLSKTQESGLSARCGSSPGRR*LLSRYI Trigger: TATGTACCTGGAGAGAAGCCACCGCCTCCCTGGGCT...GCTACCACATCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | CGGCCCCCAGCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGATCCCAAGGCTGCTTCTaGATCATCTTCCTTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPPAPFLSKTQESGLSARSQGCF*IIFLIL Trigger: GAGGATAAGGAAGATGATTCAGAAGCAGCCTTGGGA...TCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGCTGGGGGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | GCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGATGTGGTAGCCCAGGAAATGGACAGTaGCCTTCTCGGAGAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: APFLSKTQESGLSARCGSPGNGQ*PSRRSA Trigger: TGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGG...GCTACCACATCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | ATGCACACAGCCACGGGAATCCGGATGGGGAGGGCGGGGAAGAGAGAGAGAGAAGATTCTCTATCTATCTaGCTCACTGAAGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MHTATGIRMGRAGKREREDSLSI*LTEGRG Trigger: ACCTCTTCCTTCAGTGAGTCAGATAGATAGAGAATC...TTCTCTCTCTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR GCA 90 bp | TATCTGGCTAGTCACTTGCCTGTCACTGTCACGGGATTCTCTATCTATCTGACTCGCTTGAGCCGCCTTTaGAGTCGGAGGGGCAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YLASHLPVTVTGFSIYLTRLSRL*SRRGSL Trigger: TAGGCTGCCCCTCCGACTGCAAAGGCGGCTCAAGCG...AGTCAGATAGATAGAGAATCCCGTGACAGTGACAGGCAAGTGACTAGCCAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | GCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGATGTGGTAGCGATGGGTGGATCACGTaGTGTCAGGAGTTTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: APFLSKTQESGLSARCGSDGWIT*CQEFET Trigger: GGTCTCAAACTCCTGACATCACGTGATCCACCCATC...GCTACCACATCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | CACAGCCTTCTCCATGGAGATGACATGCAACCCTCTGCAACATACAGGGACCCATTACAAGGGATTGCGTaGCAGCGTACACAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSLLHGDDMQPSATYRDPLQGIA*QRTQPS Trigger: AGAAGGCTGTGTACGCTGTCACGCAATCCCTTGTAA...TGGGTCCCTGTATGTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | TATCTGGCTAGTCACTTGCCTGTCACTGTCACGGGATTCTCTATCTATCTGACTCTTGGCTCAAGGGCGTaGTCTGGACTGGGGACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLASHLPVTVTGFSIYLTLGSRA*SGLGTK Trigger: CTTCGTCCCCAGTCCAGACCACGCCCTTGAGCCAAG...AGTCAGATAGATAGAGAATCCCGTGACAGTGACAGGCAAGTGACTAGCCAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGATGTGGTAGCCAGCACCTACCTTTCTaGCCTTTAGGGGAGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: APFLSKTQESGLSARCGSQHLPF*PLGESQ Trigger: CTGAGACTCCCCTAAAGGCCAGAAAGGTAGGTGCTG...GCTACCACATCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | ATGCACACAGCCACGGGAATCCGGATGGGGAGGGCGGGGAAGAGAGAGAGAGAAAAAATGCTTTCTATCTaGCTAGTCACTTGCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MHTATGIRMGRAGKREREKMLSI*LVTCLS Trigger: TGACAGGCAAGTGACTAGCCAGATAGAAAGCATTTT...TTCTCTCTCTCTCTTCCCCGCCCTCCCCATCCGGATTCCCGTGGCTGTGTGCAT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR TCA 90 bp | ACAAGGGATTGCGTGACAGCGTACACAGCCTTCTCCATGGAGATGACATGCAACTCTTTCATCCTCGGCTaGTCCTGTATCACTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRDCVTAYTAFSMEMTCNSFILG*SCITVL Trigger: GAGGACAGTGATACAGGATCAGCCGAGGATGAAAGA...GTTGCATGTCATCTCCATGGAGAAGGCTGTGTACGCTGTCACGCAATCCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGATTGCGTGACAGCGTACACAGCCTTCTCCATGGAGATGACATGCAACATCTGGCTAGTCACTTaGCTGTCACTGTCACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRDCVTAYTAFSMEMTCNIWLVT*LSLSRD Trigger: ATCCCGTGACAGTGACAGGCAAGTGACTAGCCAGAT...GTTGCATGTCATCTCCATGGAGAAGGCTGTGTACGCTGTCACGCAATCCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTTTCTTTCTAAGACTCAAGAATCTGGGCTCTCAGCCAGATGTGGTAGCTTTGGGAGGCTGAGATaGGTGGATCACGTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: APFLSKTQESGLSARCGSFGRLR*VDHVMS Trigger: TGACATCACGTGATCCACCCATCTCAGCCTCCCAAA...GCTACCACATCTGGCTGAGAGCCCAGATTCTTGAGTCTTAGAAAGAAAGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| 3UTR CAA 72 bp | TTATTACACAAAAATGCTTTCTATCTGGCTAGTCACTaGCCTGTCACTGTCACGGGATTCTCTATCTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLHKNAFYLASH*PVTVTGFSIYL Trigger: CAGATAGATAGAGAATCCCGTGACAGTGACAGGCAAGTGACTAGCCAGATAGAAAGCATTTTTGTGTAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS GCA 90 bp | CTGGGAGCTGCGCGTCACCCCGGGGGCAGGAGCGCCGGTTCGGTCTaGCAGAAGCGATCACAGGTCCGGACGGTTAGGGAGGCCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LGAARHPGGRSAGSV*QKRSQVRTVREASA Trigger: CGCGCTGGCCTCCCTAACCGTCCGGACCTGTGATCGCTTCTGGCAGACCGAACCGGCGCTCCTGCCCCCGGGGTGACGCGCAGCTCCCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200453.6 |
||
| CDS GCA 90 bp | TCACCCTCAGGCGTCGGGCTCCGAGTAACTCAGAGTATCTCCGGCTaGCTCAAGTGCCGTGGCGACAAGCGGGCGCGGGGTCGTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPSGVGLRVTQSISG*LKCRGDKRARGRAA Trigger: CGCTGCACGACCCCGCGCCCGCTTGTCGCCACGGCACTTGAGGCAGCCGGAGATACTCTGAGTTACTCGGAGCCCGACGCCTGAGGGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
||
| CDS GCA 90 bp | GGCGTCGGGCTCCGAGTAACTCAGAGTATCTCCGGCTGCCTCAAGTaGCGTGGCGACAAGCGGGCGCGGGGTCGTGCAGCGTCTTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GVGLRVTQSISGCLK*RGDKRARGRAASCI Trigger: TATGCAAGACGCTGCACGACCCCGCGCCCGCTTGTCGCCACGGCACTTGAGGCAGCCGGAGATACTCTGAGTTACTCGGAGCCCGACGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
||
| CDS CCA 90 bp | CGGGCTCCGAGTAACTCAGAGTATCTCCGGCTGCCTCAAGTGCCGTaGCGACAAGCGGGCGCGGGGTCGTGCAGCGTCTTGCATAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RAPSNSEYLRLPQVP*RQAGAGSCSVLHKI Trigger: GATCTTATGCAAGACGCTGCACGACCCCGCGCCCGCTTGTCGCCACGGCACTTGAGGCAGCCGGAGATACTCTGAGTTACTCGGAGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
||
| CDS CCA 90 bp | CCAGGTCGATATCCCCAGCCCCTGAAGTGGGCCCTCTGGTCCGGGTaGGAGGGATGTGGGTCTGACTCAGCTTCTCCCAAGGCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGRYPQPLKWALWSG*EGCGSDSASPKAAS Trigger: AGAAGCAGCCTTGGGAGAAGCTGAGTCAGACCCACATCCCTCCCACCCGGACCAGAGGGCCCACTTCAGGGGCTGGGGATATCGACCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000200453.6 ENST00000600406.1 |
||
| CDS TCA 90 bp | AAGCGCACCTTTCTGGCCTTTAGGGGAGTCTCAGGGTCCGGATCATaGGTAGGGGTTTCTGGGCGCTTGAGCCGCCTTTGCAGTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRTFLAFRGVSGSGS*VGVSGRLSRLCSRR Trigger: CCTCCGACTGCAAAGGCGGCTCAAGCGCCCAGAAACCCCTACTCATGATCCGGACCCTGAGACTCCCCTAAAGGCCAGAAAGGTGCGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200453.6 |
||
| CDS TCA 90 bp | GCACCTACCTTTCTGGCCTTTAGGGGAGTCTCAGGGTCCGGATCATaGGTAGGGGTTTCTGGGCGCTTGAGCCGCCTTTGCAGTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APTFLAFRGVSGSGS*VGVSGRLSRLCSRR Trigger: CCTCCGACTGCAAAGGCGGCTCAAGCGCCCAGAAACCCCTACTCATGATCCGGACCCTGAGACTCCCCTAAAGGCCAGAAAGGTAGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CAA 90 bp | TGCGTGACAGCGTACACAGCCTTCTCCATGGAGATGACATGCAACCCTCTGCAAGCGCTTGAGCCGCCTTaGCAGTCGGAGGGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CVTAYTAFSMEMTCNPLQALEPP*QSEGQP Trigger: AGGCTGCCCCTCCGACTGCAAAGGCGGCTCAAGCGC...TTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTGTACGCTGTCACGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CAA 90 bp | AGACATGGGGACACAGGCAGGAGATGCACACAGCCACGGGAATCCGGATGGGGACCTTCAAGAAAGCACTaGCAGGGGGTGTGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHGDTGRRCTQPRESGWGPSRKH*QGVWKQ Trigger: CTGCTTCCACACCCCCTGCAAGTGCTTTCTTGAAGG...TCCCCATCCGGATTCCCGTGGCTGTGTGCATCTCCTGCCTGTGTCCCCATGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS-3UTR CAA 90 bp | CACAGCCTTCTCCATGGAGATGACATGCAACCCTCTGCAACATACAGGGACCCACTTGGGCGGCAGAGGTaGGCAGTGAGCCAAGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSLLHGDDMQPSATYRDPLGRQR*AVSQDH Trigger: ATGATCTTGGCTCACTGCCAACCTCTGCCGCCCAAG...TGGGTCCCTGTATGTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
||
| CDS CCA 90 bp | CTCTTCCTCCCCTGGGCAAGACACCCAAGTGCTGGGCTTGGATCCTaGAGACAAGGCAGAAGTAGAGGTTCTGTGAGCTTCTTTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LFLPWARHPSAGLGS*RQGRSRGSVSFFLY Trigger: GTAAAGAAAGAAGCTCACAGAACCTCTACTTCTGCCTTGTCTCCAGGATCCAAGCCCAGCACTTGGGTGTCTTGCCCAGGGGAGGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
||
| CDS CCA 90 bp | TCTTTCTGTTCTTTTATCCTCCGTGGCTTGATTCTCTTCCTCCCCTaGGCAAGACACCCAAGTGCTGGGCTTGGATCCTGGAGACAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFCSFILRGLILFLP*ARHPSAGLGSWRQG Trigger: GCCTTGTCTCCAGGATCCAAGCCCAGCACTTGGGTGTCTTGCCCAGGGGAGGAAGAGAATCAAGCCACGGAGGATAAAAGAACAGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200453.6 |
||
| CDS-3UTR CAA 90 bp | CACAGCCTTCTCCATGGAGATGACATGCAACCCTCTGCAACATACAGGGACCCATATCTGGCTAGTCACTaGCCTGTCACTGTCACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSLLHGDDMQPSATYRDPYLASH*PVTVTG Trigger: TCCCGTGACAGTGACAGGCAAGTGACTAGCCAGATA...TGGGTCCCTGTATGTTGCAGAGGGTTGCATGTCATCTCCATGGAGAAGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600406.1 |
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| CDS GCA 72 bp | GCGCGTCACCCCGGGGGCAGGAGCGCCGGTTCGGTCTaGCAGAAGCGATCACAGGTCCGGACGGTTAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ARHPGGRSAGSV*QKRSQVRTVRE Trigger: CTCCCTAACCGTCCGGACCTGTGATCGCTTCTGGCAGACCGAACCGGCGCTCCTGCCCCCGGGGTGACGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS GCA 72 bp | GGCGTCGGGCTCCGAGTAACTCAGAGTATCTCCGGCTaGCTCAAGTGCCGTGGCGACAAGCGGGCGCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GVGLRVTQSISG*LKCRGDKRARG Trigger: ACCCCGCGCCCGCTTGTCGCCACGGCACTTGAGGCAGCCGGAGATACTCTGAGTTACTCGGAGCCCGACGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS CCA 72 bp | CAGGCGGCTCCAGGCGCGGCTGAGGAGGCCCATCACTaGGGACAGGAGGAAGAAAGGGTGGGCATCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: QAAPGAAEEAHH*GQEEERVGIPP Trigger: TGGAGGGATGCCCACCCTTTCTTCCTCCTGTCCCCAGTGATGGGCCTCCTCAGCCGCGCCTGGAGCCGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS GCA 72 bp | CTCCGAGTAACTCAGAGTATCTCCGGCTGCCTCAAGTaGCGTGGCGACAAGCGGGCGCGGGGTCGTGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LRVTQSISGCLK*RGDKRARGRAA Trigger: CGCTGCACGACCCCGCGCCCGCTTGTCGCCACGGCACTTGAGGCAGCCGGAGATACTCTGAGTTACTCGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS CCA 72 bp | CCAGGTCGATATCCCCAGCCCCTGAAGTGGGCCCTCTaGTCCGGGTGGGAGGGATGTGGGTCTGACTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGRYPQPLKWAL*SGWEGCGSDSA Trigger: AGCTGAGTCAGACCCACATCCCTCCCACCCGGACCAGAGGGCCCACTTCAGGGGCTGGGGATATCGACCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000200453.6 ENST00000600406.1 |
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| CDS CCA 72 bp | CCCAGGGAGGCGGTGGCTTCTCTCCAGGTACATAGATaGCCACTCGGAAGGGGCAGGGCTCAGCTTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: PREAVASLQVHR*PLGRGRAQLLP Trigger: GGGGAGAAGCTGAGCCCTGCCCCTTCCGAGTGGCCATCTATGTACCTGGAGAGAAGCCACCGCCTCCCTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000200453.6 ENST00000600406.1 |
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| CDS CCA 72 bp | AGTAACTCAGAGTATCTCCGGCTGCCTCAAGTGCCGTaGCGACAAGCGGGCGCGGGGTCGTGCAGCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SNSEYLRLPQVP*RQAGAGSCSVL Trigger: CAAGACGCTGCACGACCCCGCGCCCGCTTGTCGCCACGGCACTTGAGGCAGCCGGAGATACTCTGAGTTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS CCA 72 bp | TCTTCATCACTGGGTTGGCACCACCAGGACTTGAGCTaGGGCCTCTGGGCTGGGGCTGAGGATTGCGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSSLGWHHQDLS*GLWAGAEDCGP Trigger: AGGGCCGCAATCCTCAGCCCCAGCCCAGAGGCCCCAGCTCAAGTCCTGGTGGTGCCAACCCAGTGATGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS CCA 72 bp | TATCCCCAGCCCCTGAAGTGGGCCCTCTGGTCCGGGTaGGAGGGATGTGGGTCTGACTCAGCTTCTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: YPQPLKWALWSG*EGCGSDSASPK Trigger: CTTGGGAGAAGCTGAGTCAGACCCACATCCCTCCCACCCGGACCAGAGGGCCCACTTCAGGGGCTGGGGATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000200453.6 ENST00000600406.1 |
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| CDS CCA 72 bp | GGGAGTCTCAGGGTCCGGATCATGAGTAGGGGTTTCTaGGCGCTTGAGCCGCCTTTGCAGTCGGAGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GSLRVRIMSRGF*ALEPPLQSEGQ Trigger: CTGCCCCTCCGACTGCAAAGGCGGCTCAAGCGCCCAGAAACCCCTACTCATGATCCGGACCCTGAGACTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000200453.6 ENST00000600406.1 |
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| CDS CAA 72 bp | ATCATGAGTAGGGGTTTCTGGGCGCTTGAGCCGCCTTaGCAGTCGGAGGGGCAGCCTAGGAGGAGCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: IMSRGFWALEPP*QSEGQPRRSPG Trigger: CCCTGGGCTCCTCCTAGGCTGCCCCTCCGACTGCAAAGGCGGCTCAAGCGCCCAGAAACCCCTACTCATGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000200453.6 ENST00000600406.1 |
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| CDS GCA 72 bp | CCTCAAGTGCCGTGGCGACAAGCGGGCGCGGGGTCGTaGAGCGTCTTGCATAAGATCAACAACTGGGATGGG | + |
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Preference number: 6 (lower is better) Translates to: PQVPWRQAGAGS*SVLHKINNWDG Trigger: CCCATCCCAGTTGTTGATCTTATGCAAGACGCTGCACGACCCCGCGCCCGCTTGTCGCCACGGCACTTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS TCA 72 bp | GGGCCGGCCCTGCCCAGACAGCCAGGAAATGGACAGTaGCCTTCTCGGAGAAGCGCACCTTTCTGGCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: GPALPRQPGNGQ*PSRRSAPFWPL Trigger: TAAAGGCCAGAAAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTTCCTGGCTGTCTGGGCAGGGCCGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS GCA 72 bp | CGTGGCGACAAGCGGGCGCGGGGTCGTGCAGCGTCTTaGATAAGATCAACAACTGGGATGGGAACCGATAAG | + |
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Preference number: 6 (lower is better) Translates to: RGDKRARGRAAS*IRSTTGMGTDK Trigger: CTTATCGGTTCCCATCCCAGTTGTTGATCTTATGCAAGACGCTGCACGACCCCGCGCCCGCTTGTCGCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS CAA 90 bp | GCTGAGGATTGCGGCCCTGGGGCAGCTTCTCCTTTCCCAGTTTCTTaGTGTGCCTTTTCCTCCTTCTCCTCGGACGCCTCTCCTGAACGA | + |
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Preference number: 6 (lower is better) Translates to: AEDCGPGAASPFPVS*CAFSSFSSDASPER Trigger: TCGTTCAGGAGAGGCGTCCGAGGAGAAGGAGGAAAAGGCACACAAAGAAACTGGGAAAGGAGAAGCTGCCCCAGGGCCGCAATCCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS TCA 72 bp | TTTCTGGCCTTTAGGGGAGTCTCAGGGTCCGGATCATaGGTAGGGGTTTCTGGGCGCTTGAGCCGCCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: FLAFRGVSGSGS*VGVSGRLSRLC Trigger: GCAAAGGCGGCTCAAGCGCCCAGAAACCCCTACTCATGATCCGGACCCTGAGACTCCCCTAAAGGCCAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000200453.6 ENST00000600406.1 |
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| CDS CAA 72 bp | TGCGGCCCTGGGGCAGCTTCTCCTTTCCCAGTTTCTTaGTGTGCCTTTTCCTCCTTCTCCTCGGACGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: CGPGAASPFPVS*CAFSSFSSDAS Trigger: AGAGGCGTCCGAGGAGAAGGAGGAAAAGGCACACAAAGAAACTGGGAAAGGAGAAGCTGCCCCAGGGCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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| CDS GCA 72 bp | TGCAAATTGACTTCCCTGCCCTCTAGGGACACTGGTTaGCTCTCGCTCACCATACATGCCATCATCATCATC | + |
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Preference number: 6 (lower is better) Translates to: CKLTSLPSRDTG*LSLTIHAIIII Trigger: GATGATGATGATGGCATGTATGGTGAGCGAGAGGCAACCAGTGTCCCTAGAGGGCAGGGAAGTCAATTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200453.6 |
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