Pregenerated sensors for PPP1R14A (Homo sapiens)
Ensembl gene IDs: ENSG00000167641Ensembl transcript IDs: ENST00000301242.9, ENST00000347262.8, ENST00000587515.5, ENST00000591291.5, ENST00000591585.1
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAATGGAGGGTGGTGGGGCCGGGTaGTGTTCCCCAGAGACCCTT | + |
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Preference number: 2 (lower is better) Translates to: RTGTGEAKTGQMGEDRMEGGGAG*CSPETL Trigger: AAGGGTCTCTGGGGAACACCACCCGGCCCCACCACC...CTCCATTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAATGGAGCCCCAGAGACCCTTCTaGCAGCTTCTTCCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RTGTGEAKTGQMGEDRMEPQRPF*QLLPPP Trigger: GGGAGGGGGAAGAAGCTGGCAGAAGGGTCTCTGGGG...CTCCATTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| 3UTR-3UTR CCA 90 bp | GCCAAAGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAAGACAAAAGACACCCCTaGAGACCAGAAAGAGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: AKGQAQERQKQGRWGRTEDKRHP*RPERAA Trigger: CGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTC...TTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | AGACTGAGCCCGAAGGCTGGTGGCCAAAGGACAGGCACAGGAGAGGCAAAAACAGCCTCGCGCCCCGGGTaGTTCTTACGGGCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RLSPKAGGQRTGTGEAKTASRPG*FLRARA Trigger: CGCCCTGGCCCGTAAGAAGCACCCGGGGCGCGAGGC...TGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGCCACCAGCCTTCGGGCTCAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | AGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGAGGGCAGGTGAGGGCCCCCAGAGGTaGGGAAGGGAGCCCGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SRRTKDTPGDQKELRRAGEGPQR*GREPGV Trigger: CACCCCGGGCTCCCTTCCCCACCTCTGGGGGCCCTC...ACCTGCCCTCCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | AGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAATGGAGGAGCTGCCATCGCGCTaGTGGACCCAGCCTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RTGTGEAKTGQMGEDRMEELPSR*WTQPGP Trigger: GGGGCCAGGCTGGGTCCAGCAGCGCGATGGCAGCTC...CTCCATTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | GCCAAAGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAAACGTCCAGCCGCCGCTaGAGCTCCCGCCGGTCATAC | + |
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Preference number: 4 (lower is better) Translates to: AKGQAQERQKQGRWGRTETSSRR*SSRRSY Trigger: GTATGACCGGCGGGAGCTGCAGCGGCGGCTGGACGT...TTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | AGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGAGGGCAGGTCCCGCGGGCCCGCGATaGAGACTGCAGCTTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SRRTKDTPGDQKELRRAGPAGPR*RLQLAQ Trigger: CTGAGCAAGCTGCAGTCTCCATCGCGGGCCCGCGGG...ACCTGCCCTCCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR TCA 90 bp | AGAGAGACAAGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGCGCTTGCCCAGCCGCTaGGCTGCCATCGCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RETSRRTKDTPGDQKELRRLPSR*AAIALL Trigger: CAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCG...CCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACTTGTCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | AGACTGAGCCCGAAGGCTGGTGGCCAAAGGACAGGCACAGGAGAGGCAAAAACAGCCCGCGATGGAGACTaGAGCTTGCTCAGCACGCGC | + |
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Preference number: 4 (lower is better) Translates to: RLSPKAGGQRTGTGEAKTARDGD*SLLSTR Trigger: GCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCGGGC...TGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGCCACCAGCCTTCGGGCTCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | AGAGAGACAAGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGCTGCTGGACCCAGCCTaGCCCCGCGCTGTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RETSRRTKDTPGDQKELRLLDPA*PRAVRL Trigger: AAGGCGCACAGCGCGGGGCCAGGCTGGGTCCAGCAG...CCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACTTGTCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | GCCAAAGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAAGGTGGTGGGGCCGGGTaGTGTTCCCCAGAGACCCTT | + |
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Preference number: 4 (lower is better) Translates to: AKGQAQERQKQGRWGRTEGGGAG*CSPETL Trigger: AAGGGTCTCTGGGGAACACCACCCGGCCCCACCACC...TTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | GGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAATGGAGCGAGCCCGAAGGCTGGTaGCCAAAGGACAGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GQAQERQKQGRWGRTEWSEPEGW*PKDRHR Trigger: CCTGTGCCTGTCCTTTGGCCACCAGCCTTCGGGCTC...GCTCCATTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | GCCAAAGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAACCCCAGAGACCCTTCTaGCAGCTTCTTCCCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: AKGQAQERQKQGRWGRTEPQRPF*QLLPPP Trigger: GGGAGGGGGAAGAAGCTGGCAGAAGGGTCTCTGGGG...TTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGGTCGTGGGAGGGGCTTaGCTGGCGGAGGCCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGVVGGA*LAEAGL Trigger: CAGCCCGGCCTCCGCCAGCCAAGCCCCTCCCACGAC...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR TCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGTCCTGGAGGGGGCTaGGGCTGCCGTCGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGGPGGG*GCRRGR Trigger: CCTCCCACGACGGCAGCCTCAGCCCCCTCCAGGACC...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR TCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGCAAGAGGGTCAGGGGTaGGCAGTCCGGGCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGQEGQG*AVRARS Trigger: GGACCGGGCCCGGACTGCTCACCCCTGACCCTCTTG...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGACAAGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGAGGACAGAGGGAGACTaGGCCCGAAGGCTGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RETSRRTKDTPGDQKELRRTEGD*ARRLVA Trigger: GGCCACCAGCCTTCGGGCTCAGTCTCCCTCTGTCCT...CCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACTTGTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGGAGCTGCCATCGCGCTaGTGGACCCAGCCTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGELPSR*WTQPGP Trigger: GGGGCCAGGCTGGGTCCAGCAGCGCGATGGCAGCTC...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGACAAGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGTGCTCAGCACGCGCTTaGCCAGCCGCTGAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RETSRRTKDTPGDQKELRCSARA*PAAELP Trigger: TGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCA...CCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACTTGTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | AGACTGAGCCCGAAGGCTGGTGGCCAAAGGACAGGCACAGGAGAGGCAAAAACATTTCCCCGTCTGCAGTaGGAGAGTAGGCCGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: RLSPKAGGQRTGTGEAKTFPRLQ*ESRPLR Trigger: ACGCAGCGGCCTACTCTCGCACTGCAGACGGGGAAA...TGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGCCACCAGCCTTCGGGCTCAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | GCCAAAGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAACTCAGTTTCCCCGTCTaGAGTGCGAGAGTAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AKGQAQERQKQGRWGRTELSFPV*SARVGR Trigger: GCGGCCTACTCTCGCACTGCAGACGGGGAAACTGAG...TTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGTCGTGGGAGGGGCTTaGCTGGCGGAGGCCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGVVGGA*LAEAGL Trigger: CAGCCCGGCCTCCGCCAGCCAAGCCCCTCCCACGAC...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR CCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGCTGAGGCTGCCGTCGTaGGAGGGGCTTGGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGLRLPS*EGLGWR Trigger: CCGCCAGCCAAGCCCCTCCCACGACGGCAGCCTCAG...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR CCA 90 bp | AGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGAGGGCAGGTACTGAGCCCGAAGGCTaGTGGCCAAAGGACAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRRTKDTPGDQKELRRAGTEPEG*WPKDRH Trigger: GTGCCTGTCCTTTGGCCACCAGCCTTCGGGCTCAGT...ACCTGCCCTCCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | AGAGAGACAAGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGGGAAGTGGGAGGGGTTaGGCCGCTCAGCTTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RETSRRTKDTPGDQKELRGSGRG*AAQLQG Trigger: GCCCTGAAGCTGAGCGGCCCAACCCCTCCCACTTCC...CCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACTTGTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR TCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGCGCTTGCCCAGCCGCTaGGCTGCCATCGCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGRLPSR*AAIALL Trigger: CAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCG...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR GCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGACGTCCAGCCGCCGCTaGAGCTCCCGCCGGTCATAC | + |
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Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGTSSRR*SSRRSY Trigger: GTATGACCGGCGGGAGCTGCAGCGGCGGCTGGACGT...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR GCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGCCTCGCGCCCCGGGTaGTTCTTACGGGCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRASRPG*FLRARA Trigger: CGCCCTGGCCCGTAAGAAGCACCCGGGGCGCGAGGC...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000347262.8 |
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| CDS-3UTR CCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGCCCGCGGGCCCGCGATaGAGACTGCAGCTTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGPAGPR*RLQLAQ Trigger: CTGAGCAAGCTGCAGTCTCCATCGCGGGCCCGCGGG...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR TCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGCGCTTGCCCAGCCGCTaGGCTGCCATCGCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRRLPSR*AAIALL Trigger: CAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCG...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGACAAGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGGCATGTCTGCCTCCATaGCGCGGTACAGCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RETSRRTKDTPGDQKELRACLPP*RGTAPP Trigger: TGGAGGAGCTGTACCGCGGCATGGAGGCAGACATGC...CCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACTTGTCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGCTGAGGCTGCCGTCGTaGGAGGGGCTTGGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRLRLPS*EGLGWR Trigger: CCGCCAGCCAAGCCCCTCCCACGACGGCAGCCTCAG...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR CCA 90 bp | AGACTGAGCCCGAAGGCTGGTGGCCAAAGGACAGGCACAGGAGAGGCAAAAACACCCCATCAGAGTACTTaGGGCCAGAACAGGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RLSPKAGGQRTGTGEAKTPHQST*GQNRER Trigger: TCTCTCCCTGTTCTGGCCCCAAGTACTCTGATGGGG...TGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGCCACCAGCCTTCGGGCTCAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | AGAGAGACAAGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGTGGGGGAGGACAGAATaGAGCCCCCTCAGCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: RETSRRTKDTPGDQKELRWGRTE*SPLSRW Trigger: CCATCTGCTGAGGGGGCTCCATTCTGTCCTCCCCCA...CCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACTTGTCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGCGGGAGCCTCGGGGCTaGCACGGGTCTCTCGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRREPRG*HGSLAL Trigger: CAAGGCGAGAGACCCGTGCCAGCCCCGAGGCTCCCG...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587515.5 |
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| CDS-3UTR CCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGTACCAGCCCGATGCCTaGGCCCATGGGCCCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRYQPDA*AHGPRE Trigger: CTCCCGGGGCCCATGGGCCCAGGCATCGGGCTGGTA...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587515.5 |
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| CDS-3UTR TCA 90 bp | AGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGAGGGCAGGTGACAGGTTTCCCACATaGCTTCAGGAGTCCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SRRTKDTPGDQKELRRAGDRFPT*LQESLD Trigger: ATCCAGGGACTCCTGAAGTCATGTGGGAAACCTGTC...ACCTGCCCTCCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR TCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGTCCTGGAGGGGGCTaGGGCTGCCGTCGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASGPGGG*GCRRGR Trigger: CCTCCCACGACGGCAGCCTCAGCCCCCTCCAGGACC...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGACAAGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGATGGAGACTGCAGCTTaGTCAGCACGCGCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RETSRRTKDTPGDQKELRMETAA*SARACP Trigger: TGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCAT...CCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACTTGTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR GCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGCTTTGTCCAGGGCTCTaGAGGAGCCCCACCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRLCPGL*RSPTGP Trigger: GGGGCCGGTGGGGCTCCTGCAGAGCCCTGGACAAAG...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587515.5 |
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| CDS-3UTR GCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGCCAGGGAGGGAGGGGTaGTTAGGATCCCCTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGPGREG*LGSPSL Trigger: GAGGGAAGGGGATCCTAAGCACCCCTCCCTCCCTGG...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000587515.5 |
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| CDS-3UTR CCA 90 bp | AGTAGGAGGACAAAAGACACCCCTGGAGACCAGAAAGAGCTGCGGAGGGCAGGTGACTTCAGGAGTCCCTaGATTTTCCGGCTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SRRTKDTPGDQKELRRAGDFRSP*IFRLLS Trigger: GGAGAGAAGCCGGAAAATCCAGGGACTCCTGAAGTC...ACCTGCCCTCCGCAGCTCTTTCTGGTCTCCAGGGGTGTCTTTTGTCCTCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR TCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGTGCCTGTGGAGGCCTTaGAGCTTTGCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGCLWRP*SFASSS Trigger: GGAGCTGCTGGCAAAGCTTCAAGGCCTCCACAGGCA...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR TCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCGGTCCTGGAGGGGGCTaGGGCTGCCGTCGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVGPGGG*GCRRGR Trigger: CCTCCCACGACGGCAGCCTCAGCCCCCTCCAGGACC...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR TCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCCAAGAGGGTCAGGGGTaGGCAGTCCGGGCCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASQEGQG*AVRARS Trigger: GGACCGGGCCCGGACTGCTCACCCCTGACCCTCTTG...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR GCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGTGCTCAGCACGCGCTTaGCCAGCCGCTGAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRCSARA*PAAELP Trigger: TGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCA...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
||
| CDS-3UTR GCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGCTCAGTTTCCCCGTCTaGAGTGCGAGAGTAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGLSFPV*SARVGR Trigger: GCGGCCTACTCTCGCACTGCAGACGGGGAAACTGAG...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000347262.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCCTGCTGGACCCAGCCTaGCCCCGCGCTGTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASLLDPA*PRAVRL Trigger: AAGGCGCACAGCGCGGGGCCAGGCTGGGTCCAGCAG...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000347262.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGTGCCTGTGGAGGCCTTaGAGCTTTGCCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGCLWRP*SFASSS Trigger: GGAGCTGCTGGCAAAGCTTCAAGGCCTCCACAGGCA...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR TCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCAAGAGGGTCAGGGGTaGGCAGTCCGGGCCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVQEGQG*AVRARS Trigger: GGACCGGGCCCGGACTGCTCACCCCTGACCCTCTTG...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR GCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGCATGTCTGCCTCCATaGCGCGGTACAGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGACLPP*RGTAPP Trigger: TGGAGGAGCTGTACCGCGGCATGGAGGCAGACATGC...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301242.9 |
||
| CDS-3UTR GCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGTTTCCCCGTCTGCAGTaGGAGAGTAGGCCGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGFPRLQ*ESRPLR Trigger: ACGCAGCGGCCTACTCTCGCACTGCAGACGGGGAAA...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000347262.8 |
||
| CDS-3UTR GCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCCTGTACCAGCCCGATaGCTGGGCCCATGGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVPVPAR*LGPWAP Trigger: CGGGGCCCATGGGCCCAGGCATCGGGCTGGTACAGG...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587515.5 |
||
| CDS-3UTR CCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCTGAGGCTGCCGTCGTaGGAGGGGCTTGGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVLRLPS*EGLGWR Trigger: CCGCCAGCCAAGCCCCTCCCACGACGGCAGCCTCAG...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR CCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGAGGGGTGACAGATaGGCTGAGAGAGCCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASGRGDR*AERAPG Trigger: CCCCGGGGCTCTCTCAGCCCATCTGTCACCCCTCCC...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587515.5 |
||
| CDS-3UTR TCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGCCAGCAGCTCCTGGATaGAGTCCTCGACAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGPAAPG*SPRQVS Trigger: GGAAACCTGTCGAGGACTTCATCCAGGAGCTGCTGG...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR GCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCTGCTCAGCACGCGCTTaGCCAGCCGCTGAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASCSARA*PAAELP Trigger: TGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCA...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
||
| CDS-3UTR GCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGATGGAGACTGCAGCTTaGTCAGCACGCGCTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGMETAA*SARACP Trigger: TGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCAT...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGCCCGCGATGGAGACTaGAGCTTGCTCAGCACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASARDGD*SLLSTR Trigger: GCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCGGGC...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
||
| CDS-3UTR GCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCACGTCCAGCCGCCGCTaGAGCTCCCGCCGGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVTSSRR*SSRRSY Trigger: GTATGACCGGCGGGAGCTGCAGCGGCGGCTGGACGT...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
||
| CDS-3UTR CCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGCCAGCTGGCGGGTTCTaGAGCATTAATGTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGPAGGF*SINVAV Trigger: GACTGCCACATTAATGCTCCAGAACCCGCCAGCTGG...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587515.5 |
||
| CDS-3UTR GCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGATGGAGACTGCAGCTTaGTCAGCACGCGCTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRMETAA*SARACP Trigger: TGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCAT...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
||
| CDS-3UTR GCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCGCCCGCGATGGAGACTaGAGCTTGCTCAGCACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVARDGD*SLLSTR Trigger: GCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCGGGC...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
||
| CDS-3UTR GCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGGAGGCCTTGAAGCTTTaGCAGCAGCTCCTGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGEALKL*QQLLDE Trigger: TTCATCCAGGAGCTGCTGGCAAAGCTTCAAGGCCTC...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR TCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGACAGGTTTCCCACATaGCTTCAGGAGTCCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGDRFPT*LQESLD Trigger: ATCCAGGGACTCCTGAAGTCATGTGGGAAACCTGTC...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000587515.5 |
||
| CDS-3UTR GCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCAGTCCGGGACAGCACTaGCAAGACGGGACATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASSPGQH*QDGTSG Trigger: CCCAGATGTCCCGTCTTGGCAGTGCTGTCCCGGACT...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587515.5 |
||
| CDS-3UTR CCA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGTTTGCCAGCAGCTCCTaGATGAAGTCCTCGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTEPLNTTYTQASWAASGFASSS*MKSSTG Trigger: ACCTGTCGAGGACTTCATCCAGGAGCTGCTGGCAAA...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR TCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCCCAGCAGCTCCTGGATaGAGTCCTCGACAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASPAAPG*SPRQVS Trigger: GGAAACCTGTCGAGGACTTCATCCAGGAGCTGCTGG...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR CCA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGTCTGGAGCATTAATGTaGCAGTCCGGGACAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRSGALM*QSGTAL Trigger: CAGTGCTGTCCCGGACTGCCACATTAATGCTCCAGA...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587515.5 |
||
| CDS-3UTR GCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCACTTCAGGAGTCCCATaGCGCGGTACAGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVTSGVP*RGTAPP Trigger: TGGAGGAGCTGTACCGCGGCATGGGACTCCTGAAGT...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000347262.8 |
||
| CDS-3UTR TCA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGACAATTCATCAATGTTaGTCTCATCGGGCATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGTIHQC*SHRACL Trigger: CAGACATGCCCGATGAGATCAACATTGATGAATTGT...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000587515.5 |
||
| CDS-3UTR TCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCGACAGGTTTCCCACATaGCTTCAGGAGTCCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVDRFPT*LQESHA Trigger: GGCATGGGACTCCTGAAGTCATGTGGGAAACCTGTC...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000347262.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGACTTCAGGAGTCCCTaGATTTTCCGGCTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTEPLNTTYTQASWAASDFRSP*IFRLLS Trigger: GGAGAGAAGCCGGAAAATCCAGGGACTCCTGAAGTC...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000587515.5 |
||
| CDS-3UTR TCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCGACAGGTTTCCCACATaGCTTCAGGAGTCCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVDRFPT*LQESLD Trigger: ATCCAGGGACTCCTGAAGTCATGTGGGAAACCTGTC...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000587515.5 |
||
| CDS-3UTR GCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCGAGGCCTTGAAGCTTTaGCAGCAGCTCCTGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVEALKL*QQLLDE Trigger: TTCATCCAGGAGCTGCTGGCAAAGCTTCAAGGCCTC...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR TCA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCACAATTCATCAATGTTaGTCTCATCGGGCATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVTIHQC*SHRACL Trigger: CAGACATGCCCGATGAGATCAACATTGATGAATTGT...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000587515.5 |
||
| CDS GCA 90 bp | GCTGAGCTGCCATCGCGCTGCTGGACCCAGCCTGGCCCCGCGCTGTaGGCCTTCGCCTCGCGCCCCGGGTGCTTCTTACGGGCCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AELPSRCWTQPGPAL*AFASRPGCFLRARA Trigger: CGCCCTGGCCCGTAAGAAGCACCCGGGGCGCGAGGCGAAGGCGCACAGCGCGGGGCCAGGCTGGGTCCAGCAGCGCGATGGCAGCTCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000347262.8 ENST00000591585.1 |
||
| CDS GCA 90 bp | CGGGACTGCCCCCTGGCCCGCGGGCCCGCGATGGAGACTGCAGCTTaGTCAGCACGCGCTTGCCCAGCCGCTGAGCTGCCATCGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RDCPLARGPAMETAA*SARACPAAELPSRC Trigger: GCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCGGGCCCGCGGGCCAGGGGGCAGTCCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000591291.5 ENST00000591585.1 |
||
| CDS GCA 90 bp | GCTTGCTCAGCACGCGCTTGCCCAGCCGCTGAGCTGCCATCGCGCTaGTGGACCCAGCCTGGCCCCGCGCTGTGCGCCTTCGCCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ACSARACPAAELPSR*WTQPGPALCAFASR Trigger: GCGCGAGGCGAAGGCGCACAGCGCGGGGCCAGGCTGGGTCCAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000347262.8 ENST00000591585.1 |
||
| CDS GCA 90 bp | GCCCGCGGGCCCGCGATGGAGACTGCAGCTTGCTCAGCACGCGCTTaGCCAGCCGCTGAGCTGCCATCGCGCTGCTGGACCCAGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARGPAMETAACSARA*PAAELPSRCWTQPG Trigger: GCCAGGCTGGGTCCAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCGGGCCCGCGGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000591291.5 ENST00000591585.1 |
||
| CDS CCA 90 bp | GGCCCGGTCCTGGAGGGGGCTGAGGCTGCCGTCGTGGGAGGGGCTTaGCTGGCGGAGGCCGGGCTGCCTGTGGAGGCCTTGAAGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPVLEGAEAAVVGGA*LAEAGLPVEALKLC Trigger: GCAAAGCTTCAAGGCCTCCACAGGCAGCCCGGCCTCCGCCAGCCAAGCCCCTCCCACGACGGCAGCCTCAGCCCCCTCCAGGACCGGGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS TCA 90 bp | CGCGATGGAGACTGCAGCTTGCTCAGCACGCGCTTGCCCAGCCGCTaGGCTGCCATCGCGCTGCTGGACCCAGCCTGGCCCCGCGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RDGDCSLLSTRLPSR*AAIALLDPAWPRAV Trigger: CACAGCGCGGGGCCAGGCTGGGTCCAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000591585.1 |
||
| CDS CCA 90 bp | GCTCTGCAGGAGCCCCACCGGCCCCAGGGCCCAGCTGGCGGGTTCTaGAGCATTAATGTGGCAGTCCGGGACAGCACTGCCAAGACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALQEPHRPQGPAGGF*SINVAVRDSTAKTG Trigger: TCCCGTCTTGGCAGTGCTGTCCCGGACTGCCACATTAATGCTCCAGAACCCGCCAGCTGGGCCCTGGGGCCGGTGGGGCTCCTGCAGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587515.5 |
||
| CDS CCA 90 bp | CCCACCGGCCCCAGGGCCCAGCTGGCGGGTTCTGGAGCATTAATGTaGCAGTCCGGGACAGCACTGCCAAGACGGGACATCTGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTGPRAQLAGSGALM*QSGTALPRRDIWVL Trigger: CAACACCCAGATGTCCCGTCTTGGCAGTGCTGTCCCGGACTGCCACATTAATGCTCCAGAACCCGCCAGCTGGGCCCTGGGGCCGGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587515.5 |
||
| CDS-3UTR CAA 90 bp | GGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAATGGAGCAGGAAGTGGGAGGGGTaGGGCCGCTCAGCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQAQERQKQGRWGRTEWSRKWEG*GRSASG Trigger: CCCTGAAGCTGAGCGGCCCAACCCCTCCCACTTCCT...GCTCCATTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000591585.1 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAATGGAGGATGGAGACTGCAGCTaGCTCAGCACGCGCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTGTGEAKTGQMGEDRMEDGDCS*LSTRLP Trigger: GGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATC...CTCCATTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000591585.1 |
||
| CDS-3UTR CAA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGCGTCGTGGGAGGGGCTaGGCTGGCGGAGGCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRRRGRG*AGGGRA Trigger: AGCCCGGCCTCCGCCAGCCAAGCCCCTCCCACGACG...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGCACAGGAGAGGCAAAAACAGGGCAGATGGGGGAGGACAGAATGGAGCCCCCATCAGAGTACTaGGGGCCAGAACAGGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: RTGTGEAKTGQMGEDRMEPPSEY*GPEQGE Trigger: CTCTCCCTGTTCTGGCCCCAAGTACTCTGATGGGGG...CTCCATTCTGTCCTCCCCCATCTGCCCTGTTTTTGCCTCTCCTGTGCCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CAA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGTCCCGCCGGTCATACTaGACGGTGACGCGCGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: VTEPLNTTYTQASWAASGSRRSY*TVTRAC Trigger: GCACGCGCGCGTCACCGTCAAGTATGACCGGCGGGA...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR CAA 90 bp | ATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCCGTCGTGGGAGGGGCTaGGCTGGCGGAGGCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: IVTEPLNTTYTQASWAASRRGRG*AGGGRA Trigger: AGCCCGGCCTCCGCCAGCCAAGCCCCTCCCACGACG...GGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR CAA 90 bp | TACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGGGATGGAGACTGCAGCTaGCTCAGCACGCGCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: YRTIKYNLYTSKLGGVRGDGDCS*LSTRLP Trigger: GGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATC...CCCCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR CAA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGTCCCGCCGGTCATACTaGACGGTGACGCGCGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRSRRSY*TVTRAC Trigger: GCACGCGCGCGTCACCGTCAAGTATGACCGGCGGGA...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR CAA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGTCGTGGGAGGGGCTaGGCTGGCGGAGGCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVRRGRG*AGGGRA Trigger: AGCCCGGCCTCCGCCAGCCAAGCCCCTCCCACGACG...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR CAA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGGATGGAGACTGCAGCTaGCTCAGCACGCGCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: VTEPLNTTYTQASWAASGDGDCS*LSTRLP Trigger: GGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATC...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000347262.8 |
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| CDS-3UTR CAA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGCTGCCTGTGGAGGCCTaGAAGCTTTGCCAGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRLPVEA*KLCQQL Trigger: GAGCTGCTGGCAAAGCTTCAAGGCCTCCACAGGCAG...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR CAA 90 bp | AGACTGAGCCCGAAGGCTGGTGGCCAAAGGACAGGCACAGGAGAGGCAAAAACAAACAATTCATCAATGTaGATCTCATCGGGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: RLSPKAGGQRTGTGEAKTNNSSM*ISSGMS Trigger: AGACATGCCCGATGAGATCAACATTGATGAATTGTT...TGTTTTTGCCTCTCCTGTGCCTGTCCTTTGGCCACCAGCCTTCGGGCTCAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591585.1 |
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| CDS-3UTR CAA 90 bp | TATTGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCTGCCTGTGGAGGCCTaGAAGCTTTGCCAGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: YCYRTIKYNLYTSKLGGVLPVEA*KLCQQL Trigger: GAGCTGCTGGCAAAGCTTCAAGGCCTCCACAGGCAG...GACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS-3UTR CAA 90 bp | GTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGGAACAATTCATCAATGTaGATCTCATCGGGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: VTEPLNTTYTQASWAASGNNSSM*ISSGMS Trigger: AGACATGCCCGATGAGATCAACATTGATGAATTGTT...CCCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000587515.5 |
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| CDS-3UTR CAA 90 bp | TGTTACAGAACCATTAAATACAACTTATACACAAGCAAGCTGGGCGGCGTCCGGAACAATTCATCAATGTaGATCTCATCGGGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: CYRTIKYNLYTSKLGGVRNNSSM*ISSGMS Trigger: AGACATGCCCGATGAGATCAACATTGATGAATTGTT...CCGGACGCCGCCCAGCTTGCTTGTGTATAAGTTGTATTTAATGGTTCTGTAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301242.9 ENST00000587515.5 |
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| CDS GCA 72 bp | CCATCGCGCTGCTGGACCCAGCCTGGCCCCGCGCTGTaGGCCTTCGCCTCGCGCCCCGGGTGCTTCTTACGG | + |
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Preference number: 6 (lower is better) Translates to: PSRCWTQPGPAL*AFASRPGCFLR Trigger: CCGTAAGAAGCACCCGGGGCGCGAGGCGAAGGCGCACAGCGCGGGGCCAGGCTGGGTCCAGCAGCGCGATGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000347262.8 ENST00000591585.1 |
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| CDS GCA 72 bp | GCACGCGCTTGCCCAGCCGCTGAGCTGCCATCGCGCTaGTGGACCCAGCCTGGCCCCGCGCTGTGCGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ARACPAAELPSR*WTQPGPALCAF Trigger: GAAGGCGCACAGCGCGGGGCCAGGCTGGGTCCAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCGCGTGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000347262.8 ENST00000591585.1 |
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| CDS GCA 72 bp | CCCCTGGCCCGCGGGCCCGCGATGGAGACTGCAGCTTaGTCAGCACGCGCTTGCCCAGCCGCTGAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PLARGPAMETAA*SARACPAAELP Trigger: TGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCGGGCCCGCGGGCCAGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000591291.5 ENST00000591585.1 |
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| CDS CAA 72 bp | ACGTCCAGCCGCCGCTGCAGCTCCCGCCGGTCATACTaGACGGTGACGCGCGCGTGCCGCTTCTGCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TSSRRCSSRRSY*TVTRACRFCSP Trigger: GGGGCTGCAGAAGCGGCACGCGCGCGTCACCGTCAAGTATGACCGGCGGGAGCTGCAGCGGCGGCTGGACGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000591291.5 ENST00000591585.1 |
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| CDS TCA 72 bp | GACTGCAGCTTGCTCAGCACGCGCTTGCCCAGCCGCTaGGCTGCCATCGCGCTGCTGGACCCAGCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: DCSLLSTRLPSR*AAIALLDPAWP Trigger: GGGCCAGGCTGGGTCCAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000591291.5 ENST00000591585.1 |
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| CDS GCA 72 bp | CCCGCGATGGAGACTGCAGCTTGCTCAGCACGCGCTTaGCCAGCCGCTGAGCTGCCATCGCGCTGCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: PAMETAACSARA*PAAELPSRCWT Trigger: GGTCCAGCAGCGCGATGGCAGCTCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCTCCATCGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000591291.5 ENST00000591585.1 |
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| CDS CCA 72 bp | CCCAGGGCCCAGCTGGCGGGTTCTGGAGCATTAATGTaGCAGTCCGGGACAGCACTGCCAAGACGGGACATC | + |
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Preference number: 6 (lower is better) Translates to: PRAQLAGSGALM*QSGTALPRRDI Trigger: GATGTCCCGTCTTGGCAGTGCTGTCCCGGACTGCCACATTAATGCTCCAGAACCCGCCAGCTGGGCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587515.5 |
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| CDS GCA 72 bp | GCGGAGGCCGGGCTGCCTGTGGAGGCCTTGAAGCTTTaGCAGCAGCTCCTGGATGAAGTCCTCGACAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: AEAGLPVEALKL*QQLLDEVLDRF Trigger: AAACCTGTCGAGGACTTCATCCAGGAGCTGCTGGCAAAGCTTCAAGGCCTCCACAGGCAGCCCGGCCTCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000347262.8 ENST00000587515.5 |
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| CDS TCA 72 bp | CCTCTTCACTCTCTAACTCCAACAATTCATCAATGTTaGTCTCATCGGGCATGTCTGCCTCCATGCCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: PLHSLTPTIHQC*SHRACLPPCRG Trigger: ACCGCGGCATGGAGGCAGACATGCCCGATGAGATCAACATTGATGAATTGTTGGAGTTAGAGAGTGAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301242.9 ENST00000591291.5 ENST00000591585.1 |
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| CDS TCA 72 bp | CCTCTTCACTCTCTAACTCCAACAATTCATCAATGTTaGTCTCATCGGGCATGTCTGCCTCCTAGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PLHSLTPTIHQC*SHRACLPPRAR Trigger: CCTGGCCCTAGGAGGCAGACATGCCCGATGAGATCAACATTGATGAATTGTTGGAGTTAGAGAGTGAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587515.5 |
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