RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R13L (Homo sapiens)

Ensembl gene IDs: ENSG00000104881

Ensembl transcript IDs: ENST00000360957.10, ENST00000418234.6, ENST00000585905.1, ENST00000587270.5, ENST00000589858.1, ENST00000591986.1, ENST00000592134.1, ENST00000593226.5

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTaGCCCATCCCAGGCCCGGCTGGGCAGGTGGCTGGCTTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: RDGVSSDSQEYPVVW*PIPGPAGQVAGLLG
Trigger: CCCCAGCAAGCCAGCCACCTGCCCAGCCGGGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR TCA 90 bp TTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTaGCTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: FPPRPQDCWERWCQQ*LPGISSGVVAHPRP
Trigger: GGGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR TCA 90 bp GATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTaGTTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGTGATTTCCAG +
Preference number: 1 (lower is better)
Translates to: DVMMVVGMGGTLDGI*FGKRKWFPVPSDFQ
Trigger: CTGGAAATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCGCCCGGCTGGGCAGGTaGCTGGCTTGCTGGGGGATG +
Preference number: 2 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSARLGR*LACWGM
Trigger: CATCCCCCAGCAAGCCAGCCACCTGCCCAGCCGGGC...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCCATCCCAGGCCCGGCTaGGCAGGTGGCTGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPHPRPG*AGGWLA
Trigger: AGCAAGCCAGCCACCTGCCCAGCCGGGCCTGGGATG...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCCACCACCAGCAGGGTaGGGGGTGCAGATAAAGGCA +
Preference number: 2 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGPPPAG*GVQIKA
Trigger: TGCCTTTATCTGCACCCCTCACCCTGCTGGTGGTGG...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp GCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCCGGCTGAGAACAGAGAACCGGTaGCAAGGACCACCACCAGCA +
Preference number: 2 (lower is better)
Translates to: AVTPRNIQWCGGPSQARLRTENR*QGPPPA
Trigger: TGCTGGTGGTGGTCCTTGCCACCGGTTCTCTGTTCT...CAGCCGGGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCGGCTGGGCAGGTGGCTaGCTTGCTGGGGGATGTGAT +
Preference number: 2 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPGWAGG*LAGGCD
Trigger: ATCACATCCCCCAGCAAGCCAGCCACCTGCCCAGCC...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTATCCAGTGGTGTGGTaGCCCATCCCAGGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQYPVVW*PIPGPA
Trigger: AGCCGGGCCTGGGATGGGCCACCACACCACTGGATA...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp GGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGAATATCCAGTGGTGTaGTGGCCCATCCCAGGCCCG +
Preference number: 2 (lower is better)
Translates to: GILVETNVSHPDPKTAGREYPVV*WPIPGP
Trigger: CGGGCCTGGGATGGGCCACCACACCACTGGATATTC...TCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp CCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGGAATATCCAGTGGTGTaGTGGCCCATCCCAGGCCCG +
Preference number: 2 (lower is better)
Translates to: PGRDQCFPPRPQDCWERWEYPVV*WPIPGP
Trigger: CGGGCCTGGGATGGGCCACCACACCACTGGATATTC...CCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp GGCTGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGAAGAACAGAGAACCGGTaGCAAGGACCACCACCAGCA +
Preference number: 2 (lower is better)
Translates to: GWLAGGCDDGGRHGRHFGRTENR*QGPPPA
Trigger: TGCTGGTGGTGGTCCTTGCCACCGGTTCTCTGTTCT...TCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCAGGAATATCCAGTaGTGTGGTGGCCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRPRNIQ*CGGPSQ
Trigger: CTGGGATGGGCCACCACACCACTGGATATTCCTGGG...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp CCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGGTTTCCTGTCCCCAGTaGTTTCCAGCCCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PGRDQCFPPRPQDCWERWVSCPQ*FPALPR
Trigger: TCTGGGAAGGGCTGGAAATCACTGGGGACAGGAAAC...CCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCGTTTCCTGTCCCCAGTaGTTTCCAGCCCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSVSCPQ*FPALPR
Trigger: TCTGGGAAGGGCTGGAAATCACTGGGGACAGGAAAC...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGCCACCACCAGCAGGGTaGGGGGTGCAGATAAAGGCA +
Preference number: 2 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGPPPAG*GVQIKA
Trigger: TGCCTTTATCTGCACCCCTCACCCTGCTGGTGGTGG...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCCACCACCAGCAGGGTaGGGGGTGCAGATAAAGGCA +
Preference number: 2 (lower is better)
Translates to: FPDLPRLRQITKFKAGALPPPAG*GVQIKA
Trigger: TGCCTTTATCTGCACCCCTCACCCTGCTGGTGGTGG...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp AGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGAGATGGTGTCAGCAGTaGCTCCCAGGAATATCCAGT +
Preference number: 2 (lower is better)
Translates to: RGGAGILVETNVSHPDPKRWCQQ*LPGISS
Trigger: ACTGGATATTCCTGGGAGTCACTGCTGACACCATCT...CTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGGCATGGGAGGCACTTTaGACGGGATCTGATTTGGCA +
Preference number: 2 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQAWEAL*TGSDLA
Trigger: TGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp GGAGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCAGCATGGGAGGCACTTTaGACGGGATCTGATTTGGCA +
Preference number: 2 (lower is better)
Translates to: GEMVSAVTPRNIQWCGGPAWEAL*TGSDLA
Trigger: TGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC...TGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp ATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCATGGGAGGCACTTTaGACGGGATCTGATTTGGCA +
Preference number: 2 (lower is better)
Translates to: MVSAVTPRNIQWCGGPSQAWEAL*TGSDLA
Trigger: TGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC...CTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGAAGATGGTGTCAGCAGTaGCTCCCAGGAATATCCAGT +
Preference number: 2 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRRWCQQ*LPGISS
Trigger: ACTGGATATTCCTGGGAGTCACTGCTGACACCATCT...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR GCA 90 bp ATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGAGGGAAGGCAGGAATaGTTGTTTCTGTCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: MVSAVTPRNIQWCGGPSQEGRQE*LFLSAS
Trigger: TGAGGCTGACAGAAACAAGCATTCCTGCCTTCCCTC...CTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp AGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGGGACGGGATCTGATTTaGCAAAAGGAAGTGGTTTCC +
Preference number: 2 (lower is better)
Translates to: RGGAGILVETNVSHPDPKGRDLI*QKEVVS
Trigger: GGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCC...CTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTTTGGACGGGATCTaGTTTGGCAAAAGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVTLDGI*FGKRKW
Trigger: CCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGT...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTTTGGCAAAAGGAAGTaGTTTCCTGTCCCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCFGKRK*FPVPSD
Trigger: ATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAA...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR TCA 90 bp ACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTACTTTGGACGGGATCTaGTTTGGCAAAAGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: TNVSHPDPKTAGRDGVSSTLDGI*FGKRKW
Trigger: CCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGT...ACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR GCA 90 bp GGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCGAGGGAAGGCAGGAATaGTTGTTTCTGTCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: GRHFGRDLIWQKEVVSCPEGRQE*LFLSAS
Trigger: TGAGGCTGACAGAAACAAGCATTCCTGCCTTCCCTC...GGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp ACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGTGATTTCCAGCAGAACAGAGAACCGGTaGCAAGGACCACCACCAGCA +
Preference number: 2 (lower is better)
Translates to: TGSDLAKGSGFLSPVISSRTENR*QGPPPA
Trigger: TGCTGGTGGTGGTCCTTGCCACCGGTTCTCTGTTCT...GCTGGAAATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR GCA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAGAGGGAAGGCAGGAATaGTTGTTTCTGTCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQEGRQE*LFLSAS
Trigger: TGAGGCTGACAGAAACAAGCATTCCTGCCTTCCCTC...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CCA 90 bp AGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCTTTGGCAAAAGGAAGTaGTTTCCTGTCCCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: RDGVSSDSQEYPVVWWPIFGKRK*FPVPSD
Trigger: ATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAA...GATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR CCA 72 bp GTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTaGCCCATCCCAGGCCCGGCTGGGCAGGTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: VSSDSQEYPVVW*PIPGPAGQVAG
Trigger: GCCAGCCACCTGCCCAGCCGGGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CAA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCGGAAGGCAGGAATGCTaGTTTCTGTCAGCCTCAGAA +
Preference number: 3 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGGRQEC*FLSASE
Trigger: TTCTGAGGCTGACAGAAACAAGCATTCCTGCCTTCC...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR TCA 72 bp AGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTaGCTCCCAGGAATATCCAGTGGTGTGGTGGCCCAT +
Preference number: 3 (lower is better)
Translates to: RPQDCWERWCQQ*LPGISSGVVAH
Trigger: ATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR TCA 72 bp ATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTaGTTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGT +
Preference number: 3 (lower is better)
Translates to: MVVGMGGTLDGI*FGKRKWFPVPS
Trigger: ACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CAA 90 bp GGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCGGAAGGCAGGAATGCTaGTTTCTGTCAGCCTCAGAA +
Preference number: 3 (lower is better)
Translates to: GRHFGRDLIWQKEVVSCPGRQEC*FLSASE
Trigger: TTCTGAGGCTGACAGAAACAAGCATTCCTGCCTTCC...GGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
3UTR-3UTR CAA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGGAAGGCAGGAATGCTaGTTTCTGTCAGCCTCAGAA +
Preference number: 3 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGGRQEC*FLSASE
Trigger: TTCTGAGGCTGACAGAAACAAGCATTCCTGCCTTCC...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCGGAGCACCAGAGGGTTaGGGCGCGCGCGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGGAPEG*GARGGP
Trigger: AGGCCCGCCGCGCGCGCCTCAACCCTCTGGTGCTCC...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCCGGCTGCACGGCCGAGGGAGCTaGCTGCGCCATCGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: AVTPRNIQWCGGPSQARLHGRGS*LRHRRR
Trigger: GCGCCTTCGATGGCGCAGGCAGCTCCCTCGGCCGTG...CAGCCGGGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCCGGCTGCACGACGCCGCGCAGTaGAAGGGTGTCCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AVTPRNIQWCGGPSQARLHDAAQ*KGVQPW
Trigger: CCACGGCTGGACACCCTTGCACTGCGCGGCGTCGTG...CAGCCGGGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp GGCTGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACCCTCCGCAGCACGGTaGCCGACTCGCCCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: GWLAGGCDDGGRHGRHFGPSAAR*PTRPRG
Trigger: TCCGCGAGGGCGAGTCGGTCACCGTGCTGCGGAGGG...TCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCGCCGAGGGAGCTGCCTaGGCCATCGAAGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPAEGAA*AIEGAG
Trigger: CCCCGCGCCTTCGATGGCGCAGGCAGCTCCCTCGGC...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGCTGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGATCGGGGAAGAAGGCCTaGGGCCCCTCCGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GWLAGGCDDGGRHGRHFGSGKKA*GPSARG
Trigger: CCCCCTGGCGGAGGGGCCCCAGGCCTTCTTCCCCGA...TCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp GTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCGCAGCCTCGTGGGGCTaGGAGGCCTTGCTACAGGGC +
Preference number: 4 (lower is better)
Translates to: VSAVTPRNIQWCGGPSQAAASWG*EALLQG
Trigger: GCCCTGTAGCAAGGCCTCTCAGCCCCACGAGGCTGC...GGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGAGCAGGTAGAGCGGGGTaGGCGGCGACGACGGCCGTC +
Preference number: 4 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRAGRAG*AATTAV
Trigger: GACGGCCGTCGTCGCCGCGCACCCCGCTCTACCTGC...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTCGCGCGGTCCAGGCTaGCGTAGGCGTCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCSRGPG*RRRPAA
Trigger: TGCAGCCGGACGCCTACGGCAGCCTGGACCGCGCGA...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCGCCGAGGGAGCTGCCTaGGCCATCGAAGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIAEGAA*AIEGAG
Trigger: CCCCGCGCCTTCGATGGCGCAGGCAGCTCCCTCGGC...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp AGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGCACGGCCGAGGGAGCTaGCTGCGCCATCGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RGGAGILVETNVSHPDPKHGRGS*LRHRRR
Trigger: GCGCCTTCGATGGCGCAGGCAGCTCCCTCGGCCGTG...CTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGAGCGGGGCGAATGCGCTaGCGCCGGAGCCTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRAGRMR*RRSLAG
Trigger: CCCTGCTAGGCTCCGGCGGCAGCGCATTCGCCCCGC...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCGCGGGGCGAATGCGCTaGCGCCGGAGCCTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSAGRMR*RRSLAG
Trigger: CCCTGCTAGGCTCCGGCGGCAGCGCATTCGCCCCGC...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGCCTCGCTGTCCATGGTaGCGGCCGGAGCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PGRDQCFPPRPQDCWERWPRCPW*RPERAP
Trigger: AGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGG...CCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418234.6
CDS-3UTR CCA 90 bp TGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGATGCCTCGCTGTCCATaGTGCCGGCCGGAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: WLAGGCDDGGRHGRHFGRMPRCP*CRPERA
Trigger: CGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCAT...CCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp AGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGGGAGCATGGCGCGGCTaGCCCCGTGCTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGGAGILVETNVSHPDPKGAWRG*PRAPRR
Trigger: CCTTCTGGGAGCACGGGGCCAGCCGCGCCATGCTCC...CTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCCTGCGGCTGCTCTGGTaGGCTGCTCTGGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPLRLLW*AALGRG
Trigger: GCCCCGTCCCAGAGCAGCCCACCAGAGCAGCCGCAG...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp GGAGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCAGTAGCTGCCCGCGTCTaGACGCCGGTCGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GEMVSAVTPRNIQWCGGPVAARV*TPVAGQ
Trigger: CTGGCCAGCGACCGGCGTTCAGACGCGGGCAGCTAC...TGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGGTAGCTGCCCGCGTCTaGACGCCGGTCGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQVAARV*TPVAGQ
Trigger: CTGGCCAGCGACCGGCGTTCAGACGCGGGCAGCTAC...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp GGCTGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGAGCAGCCTCGTGGGGCTaGGAGGCCTTGCTACAGGGC +
Preference number: 4 (lower is better)
Translates to: GWLAGGCDDGGRHGRHFGAASWG*EALLQG
Trigger: GCCCTGTAGCAAGGCCTCTCAGCCCCACGAGGCTGC...TCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp AGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGCGGTGGCGCCGTCGCTaGGCGTGGTGGCGAAGATTG +
Preference number: 4 (lower is better)
Translates to: RGGAGILVETNVSHPDPKRWRRR*AWWRRL
Trigger: CAATCTTCGCCACCACGCTCAGCGACGGCGCCACCG...CTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GGCTGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGATCCGAACGGGGTGTCTaGGCCGTCGGTGGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GWLAGGCDDGGRHGRHFGSERGV*AVGGRL
Trigger: AAGGCGGCCACCGACGGCGCAGACACCCCGTTCGGA...TCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GGAGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCGCGCGGTCCAGGCTaGCGTAGGCGTCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GEMVSAVTPRNIQWCGGPSRGPG*RRRPAA
Trigger: TGCAGCCGGACGCCTACGGCAGCCTGGACCGCGCGA...TGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATAGCTGCGAGGCAAAGTaGCCGACGGCCCCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDSCEAK*PTAPRS
Trigger: GCTCCGCGGGGCCGTCGGGCACTTTGCCTCGCAGCT...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCGCGCGGCTGGCCCCGTaGTCCCAGAAGGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSARLAP*SQKAFC
Trigger: GCAGAACGCCTTCTGGGAGCACGGGGCCAGCCGCGC...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCCGGCTGCAGAGCGCATCTCCATaGTCTGCGGCTGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVTPRNIQWCGGPSQARLQSASP*SAAALV
Trigger: CACCAGAGCAGCCGCAGAGCATGGAGATGCGCTCTG...CAGCCGGGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGCCCGAAGGCGGACGCTaGCGCGTCGTAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQPEGGR*RVVGCG
Trigger: GCCACAGCCTACGACGCGCCAGCGTCCGCCTTCGGG...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGGGAGCATGGCGCGGCTaGCCCCGTGCTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQGAWRG*PRAPRR
Trigger: CCTTCTGGGAGCACGGGGCCAGCCGCGCCATGCTCC...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCGACTGTGCCTCCGGTaGCAGTGCTGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGRLCLR*QCWLQP
Trigger: AGGCTGCAGCCAGCACTGCCACCGGAGGCACAGTCG...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGCGGCTGCTCTGGTaGGCTGCTCTGGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDLRLLW*AALGRG
Trigger: GCCCCGTCCCAGAGCAGCCCACCAGAGCAGCCGCAG...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGGCCCGGCTGGGCAGGTaGCTGGCTTGCTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVARLGR*LACWGM
Trigger: CATCCCCCAGCAAGCCAGCCACCTGCCCAGCCGGGC...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGGCCCGGCTGGGCAGGTaGCTGGCTTGCTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQARLGR*LACWGM
Trigger: CATCCCCCAGCAAGCCAGCCACCTGCCCAGCCGGGC...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCCATCCCAGGCCCGGCTaGGCAGGTGGCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCHPRPG*AGGWLA
Trigger: AGCAAGCCAGCCACCTGCCCAGCCGGGCCTGGGATG...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp AGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCGCATGGGGATGCGGCTaGCGGGCTGCCAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RDGVSSDSQEYPVVWWPIAWGCG*RAASCE
Trigger: CTCGCAGCTGGCAGCCCGTCAGCCGCATCCCCATGC...GATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAGGAGCACCAGAGGGTTaGGGCGCGCGCGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQGAPEG*GARGGP
Trigger: AGGCCCGCCGCGCGCGCCTCAACCCTCTGGTGCTCC...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp ATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATCCCTCCGCAGCACGGTaGCCGACTCGCCCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: ILVETNVSHPDPKTAGRDPSAAR*PTRPRG
Trigger: TCCGCGAGGGCGAGTCGGTCACCGTGCTGCGGAGGG...ATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTCCGAACGGGGTGTCTaGGCCGTCGGTGGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGISERGV*AVGGRL
Trigger: AAGGCGGCCACCGACGGCGCAGACACCCCGTTCGGA...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGCGAGCGCCGGTAGCTaGCCGCGTCTGAACGCCGGT +
Preference number: 4 (lower is better)
Translates to: TNVSHPDPKTAGRDGVSSASAGS*PRLNAG
Trigger: ACCGGCGTTCAGACGCGGGCAGCTACCGGCGCTCGC...ACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGCTCGGGCACCGACTGTaGCTCCGGTGGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQLGHRL*LRWQCW
Trigger: CCAGCACTGCCACCGGAGGCACAGTCGGTGCCCGAG...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCGCATCTCCATGCTCTaGGGCTGCTCTGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGRISML*GCSGGL
Trigger: CAGCCCACCAGAGCAGCCGCAGAGCATGGAGATGCG...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCGCAGATCCTGGCACCTaGGGGCTTCCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCADPGT*GLPPAR
Trigger: CCGAGCTGGAGGAAGCCCCCAGGTGCCAGGATCTGC...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360957.10
CDS-3UTR CCA 90 bp GGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGCTCAGGGATCGAGCTaGAGCTGTACCGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GILVETNVSHPDPKTAGRAQGSS*SCTGAA
Trigger: GGCCGCCCCGGTACAGCTCCAGCTCGATCCCTGAGC...TCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCACGACGGCCGTCCCTTaGGGGACAGCGGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGITTAVP*GTAGCR
Trigger: CCTACAGCCCGCTGTCCCCCAAGGGACGGCCGTCGT...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp ATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATTCGGGGAAGAAGGCCTaGGGCCCCTCCGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: ILVETNVSHPDPKTAGRDSGKKA*GPSARG
Trigger: CCCCCTGGCGGAGGGGCCCCAGGCCTTCTTCCCCGA...ATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCCGACTGTGCCTCCGGTaGCAGTGCTGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPRLCLR*QCWLQP
Trigger: AGGCTGCAGCCAGCACTGCCACCGGAGGCACAGTCG...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCGGCTGGGCAGGTGGCTaGCTTGCTGGGGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: VSAVTPRNIQWCGGPSQAGWAGG*LAGGCD
Trigger: ATCACATCCCCCAGCAAGCCAGCCACCTGCCCAGCC...GGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCCATCCCAGGCCCGGCTaGGCAGGTGGCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSHPRPG*AGGWLA
Trigger: AGCAAGCCAGCCACCTGCCCAGCCGGGCCTGGGATG...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp GTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCTATCCAGTGGTGTGGTaGCCCATCCCAGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: VSAVTPRNIQWCGGPSQAYPVVW*PIPGPA
Trigger: AGCCGGGCCTGGGATGGGCCACCACACCACTGGATA...GGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCCAGCGCCATGCAGATaGCTGTGTCGTTGCACGACG +
Preference number: 4 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGPAPCR*LCRCTT
Trigger: CGTCGTGCAACGACACAGTCATCTGCATGGCGCTGG...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp GTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCCCACCACCAGCAGGGTaGGGGGTGCAGATAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSAVTPRNIQWCGGPSQAPPPAG*GVQIKA
Trigger: TGCCTTTATCTGCACCCCTCACCCTGCTGGTGGTGG...GGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR GCA 90 bp GGAGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCACGGCGAGGCAGGCCTTaGGAAGACGTCCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GEMVSAVTPRNIQWCGGPRRGRP*EDVQAF
Trigger: GAACGCCTGGACGTCTTCGCAAGGCCTGCCTCGCCG...TGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGCTCCAAGGCAACAGCTaGAGGCTCGGCGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQLQGNS*RLGEAG
Trigger: GCCTGCCTCGCCGAGCCTGCAGCTGTTGCCTTGGAG...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGGGTTGTCCTTGCCGGTaGCCCCCAGTCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGRDQCFPPRPQDCWERWGCPCR*PPVHPG
Trigger: GCCTGGATGGACTGGGGGGCACCGGCAAGGACAACC...CCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GGAGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCAGGTTGTCCTTGCCGGTaGCCCCCAGTCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: GEMVSAVTPRNIQWCGGPGCPCR*PPVHPG
Trigger: GCCTGGATGGACTGGGGGGCACCGGCAAGGACAACC...TGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGCGAGCGCCGGTAGCTaGCCGCGTCTGAACGCCGGT +
Preference number: 4 (lower is better)
Translates to: ILVETNVSHPDPKTAGRDASAGS*PRLNAG
Trigger: ACCGGCGTTCAGACGCGGGCAGCTACCGGCGCTCGC...ATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCAGGAATGGTGGCAGTGCTGGCTaGAGCCTCGTGGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TQTPRLLGEMVSAVTPRNGGSAG*SLVGLR
Trigger: TCTCAGCCCCACGAGGCTGCAGCCAGCACTGCCACC...ATTCCTGGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTTCCGCCAACACCCGTaGCACCTCCTCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIFRQHP*HLLQLG
Trigger: CCCGAGCTGGAGGAGGTGGCACGGGTGTTGGCGGAA...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCTGCTCTGGTGGGCTaGTCTGGGACGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGAALVG*SGTGPG
Trigger: CCCCGGCCCCGTCCCAGAGCAGCCCACCAGAGCAGC...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp AGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCACGACGCCGCGCAGTaGAAGGGTGTCCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RDGVSSDSQEYPVVWWPIHDAAQ*KGVQPW
Trigger: CCACGGCTGGACACCCTTGCACTGCGCGGCGTCGTG...GATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp ATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGGAAGTCGAAAGGCGTaGGGGGACCCTGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: MVSAVTPRNIQWCGGPSQGSRKA*GDPAGG
Trigger: TCCGCCAGCAGGGTCCCCCCACGCCTTTCGACTTCC...CTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGGAAGTCGAAAGGCGTaGGGGGACCCTGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GILVETNVSHPDPKTAGRGSRKA*GDPAGG
Trigger: TCCGCCAGCAGGGTCCCCCCACGCCTTTCGACTTCC...TCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCTGAACGCCGGTCGCTaGCCAGAGGAGAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGLNAGR*PEERPC
Trigger: ACAAGGTCTCTCCTCTGGCCAGCGACCGGCGTTCAG...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCTGGGGCTGTGGTTGTaGTTGGGGCTGCAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGLGLWL*LGLQLR
Trigger: CCTAAGCTGCAGCCCCAACCACAACCACAGCCCCAG...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp AGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCTCCGGTGGCAGTGCTaGCTGCAGCCTCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RDGVSSDSQEYPVVWWPILRWQC*LQPRGA
Trigger: AGCCCCACGAGGCTGCAGCCAGCACTGCCACCGGAG...GATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp AGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGCCCTCCTCGTTGGGCTaGCTCGGGTCGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGGAGILVETNVSHPDPKPSSLG*LGSFIS
Trigger: GGAGATGAACGACCCGAGCCAGCCCAACGAGGAGGG...CTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCTATCCAGTGGTGTGGTaGCCCATCCCAGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPYPVVW*PIPGPA
Trigger: AGCCGGGCCTGGGATGGGCCACCACACCACTGGATA...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCGGTTGGGGCACTCTCTaGTCGTCCGAACGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSGWGTL*SSERGV
Trigger: GACACCCCGTTCGGACGATCAGAGAGTGCCCCAACC...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCCCTCAGATCCCTCAGTaGTGGGGGACAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPPQIPQ*WGTALA
Trigger: AGCCAGAGCTGTCCCCCATCACTGAGGGATCTGAGG...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCCGTTGTGCAAGGCAGTaGTGCCCTCCTCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPRCARQ*CPPRWA
Trigger: AGCCCAACGAGGAGGGCATCACTGCCTTGCACAACG...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCCGGCGAGGCAGGCCTTaGGAAGACGTCCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: VETNVSHPDPKTAGRDGVRRGRP*EDVQAF
Trigger: GAACGCCTGGACGTCTTCGCAAGGCCTGCCTCGCCG...GACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp AGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCTCCAAGGCAACAGCTaGAGGCTCGGCGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RDGVSSDSQEYPVVWWPILQGNS*RLGEAG
Trigger: GCCTGCCTCGCCGAGCCTGCAGCTGTTGCCTTGGAG...GATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCAGCTGCGAGGCAAAGTaGCCGACGGCCCCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: FPDLPRLRQITKFKAGALSCEAK*PTAPRS
Trigger: GCTCCGCGGGGCCGTCGGGCACTTTGCCTCGCAGCT...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGAATGCGGCTGACGGGCTaGCAGCTGCGAGGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRMRLTG*QLRGKV
Trigger: CACTTTGCCTCGCAGCTGGCAGCCCGTCAGCCGCAT...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp AGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCGCGCGGCTGGCCCCGTaGTCCCAGAAGGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RHGRHFGRDLIWQKEVVSARLAP*SQKAFC
Trigger: GCAGAACGCCTTCTGGGAGCACGGGGCCAGCCGCGC...GGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp AGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCGGTGGCAGTGCTGGCTaGAGCCTCGTGGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RDGVSSDSQEYPVVWWPIGGSAG*SLVGLR
Trigger: TCTCAGCCCCACGAGGCTGCAGCCAGCACTGCCACC...GATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGTGATTTCCAGCGCTGCTCTGGTGGGCTaGTCTGGGACGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TGSDLAKGSGFLSPVISSAALVG*SGTGPG
Trigger: CCCCGGCCCCGTCCCAGAGCAGCCCACCAGAGCAGC...GCTGGAAATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCATCTCCTTCACCGCCTaGTGCACCACCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPISFTA*CTTSSS
Trigger: GGAGCTGGAGGTGGTGCAGCAGGCGGTGAAGGAGAT...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GGCTGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGAATCTCCTTCACCGCCTaGTGCACCACCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GWLAGGCDDGGRHGRHFGISFTA*CTTSSS
Trigger: GGAGCTGGAGGTGGTGCAGCAGGCGGTGAAGGAGAT...TCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCATTGCAGCGCCGTGCTaGACCAGCGCCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCIAAPC*TSAMQM
Trigger: CATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAAT...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp AGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGATTGCAGCGCCGTGCTaGACCAGCGCCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: RGGAGILVETNVSHPDPKIAAPC*TSAMQM
Trigger: CATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAAT...CTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGCGTGGTGGCGAAGATTaGAGCGCCGTGCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVRGGED*SAVLHQ
Trigger: CTGGTGCAGCACGGCGCTGCAATCTTCGCCACCACG...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCCCCCAGACCCCAAGACTaGTGGGAGAGATGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VSAVTPRNIQWCGGPSQAPRPQD*WERWCQ
Trigger: CTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGG...GGCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp GCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGATGCCTCGCTGTCCATaGTGCCGGCCGGAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: AWEALWTGSDLAKGSGFLMPRCP*CRPERA
Trigger: CGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCAT...CAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCGCTCAGGGATCGAGCTaGAGCTGTACCGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GRHFGRDLIWQKEVVSCPAQGSS*SCTGAA
Trigger: GGCCGCCCCGGTACAGCTCCAGCTCGATCCCTGAGC...GGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAACCCGAAGGCGGACGCTaGCGCGTCGTAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQPEGGR*RVVGCG
Trigger: GCCACAGCCTACGACGCGCCAGCGTCCGCCTTCGGG...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGCTGAACGCCGGTCGCTaGCCAGAGGAGAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: WLAGGCDDGGRHGRHFGRLNAGR*PEERPC
Trigger: ACAAGGTCTCTCCTCTGGCCAGCGACCGGCGTTCAG...CCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCGGCTGTGGTTGTGGTTaGGGCTGCAGCTTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIGCGCG*GCSLGG
Trigger: CCCGCCTAAGCTGCAGCCCCAACCACAACCACAGCC...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCCTGGGGCTGTGGTTGTaGTTGGGGCTGCAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCLGLWL*LGLQLR
Trigger: CCTAAGCTGCAGCCCCAACCACAACCACAGCCCCAG...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCGCCCGGCTGGGCAGGTaGCTGGCTTGCTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: FPDLPRLRQITKFKAGALARLGR*LACWGM
Trigger: CATCCCCCAGCAAGCCAGCCACCTGCCCAGCCGGGC...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp CCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTATCCAGTGGTGTGGTaGCCCATCCCAGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PGRDQCFPPRPQDCWERWYPVVW*PIPGPA
Trigger: AGCCGGGCCTGGGATGGGCCACCACACCACTGGATA...CCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCGAATATCCAGTGGTGTaGTGGCCCATCCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCEYPVV*WPIPGP
Trigger: CGGGCCTGGGATGGGCCACCACACCACTGGATATTC...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCGTTGTGCAAGGCAGTaGTGCCCTCCTCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDRCARQ*CPPRWA
Trigger: AGCCCAACGAGGAGGGCATCACTGCCTTGCACAACG...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGCGGTGGCGCCGTCGCTaGGCGTGGTGGCGAAGATTG +
Preference number: 4 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGRWRRR*AWWRRL
Trigger: CAATCTTCGCCACCACGCTCAGCGACGGCGCCACCG...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCCACCACCAGCAGGGTaGGGGGTGCAGATAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDPPPAG*GVQIKA
Trigger: TGCCTTTATCTGCACCCCTCACCCTGCTGGTGGTGG...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp GGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGACCACCACCAGCAGGGTaGGGGGTGCAGATAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GILVETNVSHPDPKTAGRPPPAG*GVQIKA
Trigger: TGCCTTTATCTGCACCCCTCACCCTGCTGGTGGTGG...TCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR GCA 90 bp ACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTTCCATGCTCTGCGGCTaGTCTGGTGGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TNVSHPDPKTAGRDGVSSSMLCG*SGGLLW
Trigger: CCAGAGCAGCCCACCAGAGCAGCCGCAGAGCATGGA...ACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCTCCATGCTCTGCGGCTaGTCTGGTGGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VETNVSHPDPKTAGRDGVSMLCG*SGGLLW
Trigger: CCAGAGCAGCCCACCAGAGCAGCCGCAGAGCATGGA...GACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCCAGAGCGCATCTCCATaGTCTGCGGCTGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIQSASP*SAAALV
Trigger: CACCAGAGCAGCCGCAGAGCATGGAGATGCGCTCTG...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATTCCTTCACCGCCTGCTaGACCACCTCCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ILVETNVSHPDPKTAGRDSFTAC*TTSSSP
Trigger: CGGGGAGCTGGAGGTGGTGCAGCAGGCGGTGAAGGA...ATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGCCGCAGATGGCGTTGTaGAAGGCAGTGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVPQMAL*KAVMPS
Trigger: GGAGGGCATCACTGCCTTGCACAACGCCATCTGCGG...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGAAAGATTGCAGCGCCGTaGTGCACCAGCGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRKIAAP*CTSAMQ
Trigger: CTGCATGGCGCTGGTGCAGCACGGCGCTGCAATCTT...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGACCAGAGAGCGTACACTaGCCCGCTGTTCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: GILVETNVSHPDPKTAGRPESVH*PAVHQP
Trigger: GGGCTGATGAACAGCGGGGCAGTGTACGCTCTCTGG...TCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCAGAGAGCGTACACTaGCCCGCTGTTCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRPESVH*PAVHQP
Trigger: GGGCTGATGAACAGCGGGGCAGTGTACGCTCTCTGG...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGAAGTCCCGCGCGCTCTaGAATGCCTCGCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: PGRDQCFPPRPQDCWERWKSRAL*NASLSM
Trigger: CATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTT...CCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAACGACGGCCGTCCCTTaGGGGACAGCGGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQTTAVP*GTAGCR
Trigger: CCTACAGCCCGCTGTCCCCCAAGGGACGGCCGTCGT...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGCTCCGGTGGCAGTGCTaGCTGCAGCCTCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: AWEALWTGSDLAKGSGFLLRWQC*LQPRGA
Trigger: AGCCCCACGAGGCTGCAGCCAGCACTGCCACCGGAG...CAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCTCTGCGGCTGCTCTaGTGGGCTGCTCTGGGACGG +
Preference number: 4 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGALRLL*WAALGR
Trigger: CCGTCCCAGAGCAGCCCACCAGAGCAGCCGCAGAGC...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp ATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGAATATCCAGTGGTGTaGTGGCCCATCCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: MVSAVTPRNIQWCGGPSQEYPVV*WPIPGP
Trigger: CGGGCCTGGGATGGGCCACCACACCACTGGATATTC...CTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR GCA 90 bp GGCTGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACACAGCGACTCCAGCTaGTTGGTCAGTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: GWLAGGCDDGGRHGRHFGHSDSS*LVSSST
Trigger: GGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTG...TCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCTTCTTCTCGGGCACCGACTGTaGCTCCGGTGGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DLPRLRQITKFKAGALLLLGHRL*LRWQCW
Trigger: CCAGCACTGCCACCGGAGGCACAGTCGGTGCCCGAG...AAGAAGGAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAATTCCGCCAACACCCGTaGCACCTCCTCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQFRQHP*HLLQLG
Trigger: CCCGAGCTGGAGGAGGTGGCACGGGTGTTGGCGGAA...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGTCCTTCACCGCCTGCTaGACCACCTCCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGSFTAC*TTSSSP
Trigger: CGGGGAGCTGGAGGTGGTGCAGCAGGCGGTGAAGGA...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCCCCAGACCCCAAGACTaGTGGGAGAGATGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIPRPQD*WERWCQ
Trigger: CTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGG...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp GATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGATCCGGGCAGATCCTaGCACCTGGGGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DGGRHGRHFGRDLIWQKEDPGRS*HLGASS
Trigger: GGAGGAAGCCCCCAGGTGCCAGGATCTGCCCGGATC...TTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360957.10
CDS-3UTR CCA 90 bp GTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCTCAGTTCATCCACCTTaGCCGCCGCCGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VETNVSHPDPKTAGRDGVSVHPP*PPPCPA
Trigger: AGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGA...GACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp AGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCGGCTGTGGGGGCAGCTaGGGCTGTGGTTGTGATTGT +
Preference number: 4 (lower is better)
Translates to: RDGVSSDSQEYPVVWWPIGCGGS*GCGCDC
Trigger: ACAATCACAACCACAGCCCCAGCTGCCCCCACAGCC...GATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCGGCTGTGGGGGCAGCTaGGGCTGTGGTTGTGATTGT +
Preference number: 4 (lower is better)
Translates to: VETNVSHPDPKTAGRDGVGCGGS*GCGCDC
Trigger: ACAATCACAACCACAGCCCCAGCTGCCCCCACAGCC...GACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGTGGTACTGTTTCTTGTaGGTAGGGGGCAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: WLAGGCDDGGRHGRHFGRWYCFL*VGGRAT
Trigger: TGTGGCCCTGCCCCCTACCCACAAGAAACAGTACCA...CCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp ACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGTGATTTCCAGCGCTCTGCGGCTGCTCTaGTGGGCTGCTCTGGGACGG +
Preference number: 4 (lower is better)
Translates to: TGSDLAKGSGFLSPVISSALRLL*WAALGR
Trigger: CCGTCCCAGAGCAGCCCACCAGAGCAGCCGCAGAGC...GCTGGAAATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp ATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATCCCTCCTCGTTGGGCTaGCTCGGGTCGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: ILVETNVSHPDPKTAGRDPSSLG*LGSFIS
Trigger: GGAGATGAACGACCCGAGCCAGCCCAACGAGGAGGG...ATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCGTCTGCCAGGTAGGTaGCGCAGTCAGCATAACCCT +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDRLPGR*RSQHNP
Trigger: AGGGTTATGCTGACTGCGCCACCTACCTGGCAGACG...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCGGCTGGGCAGGTGGCTaGCTTGCTGGGGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: GRHFGRDLIWQKEVVSCPGWAGG*LAGGCD
Trigger: ATCACATCCCCCAGCAAGCCAGCCACCTGCCCAGCC...GGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp ACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGTGATTTCCAGCCATCCCAGGCCCGGCTaGGCAGGTGGCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TGSDLAKGSGFLSPVISSHPRPG*AGGWLA
Trigger: AGCAAGCCAGCCACCTGCCCAGCCGGGCCTGGGATG...GCTGGAAATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGCCCAGGAATATCCAGTaGTGTGGTGGCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQPRNIQ*CGGPSQ
Trigger: CTGGGATGGGCCACCACACCACTGGATATTCCTGGG...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGCCCAGGAATATCCAGTaGTGTGGTGGCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVPRNIQ*CGGPSQ
Trigger: CTGGGATGGGCCACCACACCACTGGATATTCCTGGG...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp TGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGAGACCCCAAGACTGCTaGGAGAGATGGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WLAGGCDDGGRHGRHFGRRPQDC*ERWCQQ
Trigger: CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCT...CCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCAGCTGCCAGGTAGGTaGCGCAGTCAGCATAACCCT +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDQLPGR*RSQHNP
Trigger: AGGGTTATGCTGACTGCGCCACCTACCTGGCAGCTG...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591986.1
CDS-3UTR TCA 90 bp GCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGGGTTGGGGCACTCTCTaGTCGTCCGAACGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AWEALWTGSDLAKGSGFLGWGTL*SSERGV
Trigger: GACACCCCGTTCGGACGATCAGAGAGTGCCCCAACC...CAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp GGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCCAGCGCCATGCAGATaGCTGTGTCGTTGCACGACG +
Preference number: 4 (lower is better)
Translates to: GRHFGRDLIWQKEVVSCPPAPCR*LCRCTT
Trigger: CGTCGTGCAACGACACAGTCATCTGCATGGCGCTGG...GGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR TCA 90 bp ACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCAGGAATGTTTCCTGTCCCCAGTaGTTTCCAGCCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TQTPRLLGEMVSAVTPRNVSCPQ*FPALPR
Trigger: TCTGGGAAGGGCTGGAAATCACTGGGGACAGGAAAC...ATTCCTGGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR GCA 90 bp GTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCCCAGTCCATCCAGGCTaGTCTCCCTCCAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: VETNVSHPDPKTAGRDGVPVHPG*SPSKAT
Trigger: TGTTGCCTTGGAGGGAGAGCAGCCTGGATGGACTGG...GACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCATGCGGCTGACGGGCTaGCAGCTGCGAGGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: FPDLPRLRQITKFKAGALMRLTG*QLRGKV
Trigger: CACTTTGCCTCGCAGCTGGCAGCCCGTCAGCCGCAT...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCGCATCTCCATGCTCTaGGGCTGCTCTGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FPDLPRLRQITKFKAGALRISML*GCSGGL
Trigger: CAGCCCACCAGAGCAGCCGCAGAGCATGGAGATGCG...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGCGTGGTGGCGAAGATTaGAGCGCCGTGCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGRGGED*SAVLHQ
Trigger: CTGGTGCAGCACGGCGCTGCAATCTTCGCCACCACG...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp ACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTCCCAGACCCCAAGACTaGTGGGAGAGATGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TNVSHPDPKTAGRDGVSSPRPQD*WERWCQ
Trigger: CTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGG...ACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCGCGACTCCAGCTGCTTaGTCAGTTCATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSATPAA*SVHPPW
Trigger: CCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGC...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATGGTTGTGATTGTGGCTaGGGCTGTGGTTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDGCDCG*GCGCGW
Trigger: CCAACCACAACCACAGCCCCAGCCACAATCACAACC...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp ATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATAAGGGTGTCCAGCCGTaGCTGTCGGGGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: ILVETNVSHPDPKTAGRDKGVQP*LSGELT
Trigger: TGTCAACTCCCCCGACAGCCACGGCTGGACACCCTT...ATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTTTGAGGCTTCACCCTaGGGAACAGCCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCFEASP*GTARSS
Trigger: ACTACTTCGGGCTGTTCCCCAGGGTGAAGCCTCAAA...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCAGAACAGAGAACCGGTaGCAAGGACCACCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIRTENR*QGPPPA
Trigger: TGCTGGTGGTGGTCCTTGCCACCGGTTCTCTGTTCT...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGAGAACAGAGAACCGGTaGCAAGGACCACCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVRTENR*QGPPPA
Trigger: TGCTGGTGGTGGTCCTTGCCACCGGTTCTCTGTTCT...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCGCATGGGAGGCACTTTaGACGGGATCTGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCAWEAL*TGSDLA
Trigger: TGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAGGCTGGGCAGGTGGCTaGCTTGCTGGGGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQGWAGG*LAGGCD
Trigger: ATCACATCCCCCAGCAAGCCAGCCACCTGCCCAGCC...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp ACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTCCCAGGAATATCCAGTaGTGTGGTGGCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: TNVSHPDPKTAGRDGVSSPRNIQ*CGGPSQ
Trigger: CTGGGATGGGCCACCACACCACTGGATATTCCTGGG...ACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGAGACCCCAAGACTGCTaGGAGAGATGGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVRPQDC*ERWCQQ
Trigger: CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCT...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp TGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGTTAATTGGGGAGAGGTaGGGCAGGGATCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: WLAGGCDDGGRHGRHFGRLIGER*GRDPGR
Trigger: TCTACCAGGATCCCTGCCCCACCTCTCCCCAATTAA...CCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAACCTCAGATCCCTCAGTaGTGGGGGACAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQPQIPQ*WGTALA
Trigger: AGCCAGAGCTGTCCCCCATCACTGAGGGATCTGAGG...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCAGGCGGCTGATGATCTaGTGGTACTGTTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCRRLMI*WYCFLW
Trigger: CCACAAGAAACAGTACCAGCAGATCATCAGCCGCCT...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCCGCAGATGGCGTTGTaGAAGGCAGTGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FPDLPRLRQITKFKAGALPQMAL*KAVMPS
Trigger: GGAGGGCATCACTGCCTTGCACAACGCCATCTGCGG...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGAAGATTGCAGCGCCGTaGTGCACCAGCGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: AWEALWTGSDLAKGSGFLKIAAP*CTSAMQ
Trigger: CTGCATGGCGCTGGTGCAGCACGGCGCTGCAATCTT...CAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCAGTTCATCCACCTTaGCCGCCGCCGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AWEALWTGSDLAKGSGFLSVHPP*PPPCPA
Trigger: AGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGA...CAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCTTCTTGGCTGTGGTTGTGGTTaGGGCTGCAGCTTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: DLPRLRQITKFKAGALLLGCGCG*GCSLGG
Trigger: CCCGCCTAAGCTGCAGCCCCAACCACAACCACAGCC...AAGAAGGAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCGCATGGGAGGCACTTTaGACGGGATCTGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIAWEAL*TGSDLA
Trigger: TGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp ACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTAGACCCCAAGACTGCTaGGAGAGATGGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TNVSHPDPKTAGRDGVSSRPQDC*ERWCQQ
Trigger: CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCT...ACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGATTAATTGGGGAGAGGTaGGGCAGGGATCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRLIGER*GRDPGR
Trigger: TCTACCAGGATCCCTGCCCCACCTCTCCCCAATTAA...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp CCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGAGATGGTGTCAGCAGTaGCTCCCAGGAATATCCAGT +
Preference number: 4 (lower is better)
Translates to: PGRDQCFPPRPQDCWERWRWCQQ*LPGISS
Trigger: ACTGGATATTCCTGGGAGTCACTGCTGACACCATCT...CCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR GCA 90 bp GGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCACAGCGACTCCAGCTaGTTGGTCAGTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: GRHFGRDLIWQKEVVSCPHSDSS*LVSSST
Trigger: GGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTG...GGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGCCAGTCCATCCAGGCTaGTCTCCCTCCAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGPVHPG*SPSKAT
Trigger: TGTTGCCTTGGAGGGAGAGCAGCCTGGATGGACTGG...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCTCCCAGAAGGCGTTCTaGAGCTTGAAGATCATGCTG +
Preference number: 4 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSSQKAF*SLKIML
Trigger: CAGCATGATCTTCAAGCTGCAGAACGCCTTCTGGGA...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGAGGCGGCTGATGATCTaGTGGTACTGTTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQRRLMI*WYCFLW
Trigger: CCACAAGAAACAGTACCAGCAGATCATCAGCCGCCT...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR GCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCGAGGGAAGGCAGGAATaGTTGTTTCTGTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIEGRQE*LFLSAS
Trigger: TGAGGCTGACAGAAACAAGCATTCCTGCCTTCCCTC...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR GCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATGAGGGAAGGCAGGAATaGTTGTTTCTGTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDEGRQE*LFLSAS
Trigger: TGAGGCTGACAGAAACAAGCATTCCTGCCTTCCCTC...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp ACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGTGATTTCCAGCAAGGGTGTCCAGCCGTaGCTGTCGGGGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: TGSDLAKGSGFLSPVISSKGVQP*LSGELT
Trigger: TGTCAACTCCCCCGACAGCCACGGCTGGACACCCTT...GCTGGAAATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGCGTCTGCCAGGTAGGTaGCGCAGTCAGCATAACCCT +
Preference number: 4 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGRLPGR*RSQHNP
Trigger: AGGGTTATGCTGACTGCGCCACCTACCTGGCAGACG...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCTTTGAGGCTTCACCCTaGGGAACAGCCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: VETNVSHPDPKTAGRDGVFEASP*GTARSS
Trigger: ACTACTTCGGGCTGTTCCCCAGGGTGAAGCCTCAAA...GACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGCTGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGAGGACGGGATCTGATTTaGCAAAAGGAAGTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GWLAGGCDDGGRHGRHFGGRDLI*QKEVVS
Trigger: GGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCC...TCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCGTTTCCTGTCCCCAGTaGTTTCCAGCCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FPDLPRLRQITKFKAGALVSCPQ*FPALPR
Trigger: TCTGGGAAGGGCTGGAAATCACTGGGGACAGGAAAC...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp ATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGACTTTGGACGGGATCTaGTTTGGCAAAAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: MVSAVTPRNIQWCGGPSQTLDGI*FGKRKW
Trigger: CCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGT...CTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATTTCATGGCCAGCGACTaGAAGTTCATGTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDFMASD*KFMSRK
Trigger: CTTTCTGGACATGAACTTCCAGTCGCTGGCCATGAA...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp ATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGTTCATGGCCAGCGACTaGAAGTTCATGTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: MVSAVTPRNIQWCGGPSQFMASD*KFMSRK
Trigger: CTTTCTGGACATGAACTTCCAGTCGCTGGCCATGAA...CTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCGACTCCAGCTGCTTaGTCAGTTCATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGATPAA*SVHPPW
Trigger: CCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGC...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGGTTGTGATTGTGGCTaGGGCTGTGGTTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: DGGRHGRHFGRDLIWQKEGCDCG*GCGCGW
Trigger: CCAACCACAACCACAGCCCCAGCCACAATCACAACC...TTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCCGGCTGATGATCTGCTaGTACTGTTTCTTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LLGDVMMVVGMGGTLDGIRLMIC*YCFLWV
Trigger: TACCCACAAGAAACAGTACCAGCAGATCATCAGCCG...GATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCCGGCTGATGATCTGCTaGTACTGTTTCTTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: ETNVSHPDPKTAGRDGVSRLMIC*YCFLWV
Trigger: TACCCACAAGAAACAGTACCAGCAGATCATCAGCCG...GCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGGGACGGGATCTGATTTaGCAAAAGGAAGTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVGRDLI*QKEVVS
Trigger: GGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCC...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp ATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATTTAATTGGGGAGAGGTaGGGCAGGGATCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ILVETNVSHPDPKTAGRDLIGER*GRDPGR
Trigger: TCTACCAGGATCCCTGCCCCACCTCTCCCCAATTAA...ATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp GACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCTTCTTTGGTACTGTTTCTTGTaGGTAGGGGGCAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: DLPRLRQITKFKAGALLLWYCFL*VGGRAT
Trigger: TGTGGCCCTGCCCCCTACCCACAAGAAACAGTACCA...AAGAAGGAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGATTTGGCAAAAGGAAGTaGTTTCCTGTCCCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: GILVETNVSHPDPKTAGRFGKRK*FPVPSD
Trigger: ATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAA...TCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CCA 90 bp ACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCAGGAATTTTGGCAAAAGGAAGTaGTTTCCTGTCCCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TQTPRLLGEMVSAVTPRNFGKRK*FPVPSD
Trigger: ATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAA...ATTCCTGGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCAGATGGTGTCAGCAGTaGCTCCCAGGAATATCCAGT +
Preference number: 4 (lower is better)
Translates to: FPDLPRLRQITKFKAGALRWCQQ*LPGISS
Trigger: ACTGGATATTCCTGGGAGTCACTGCTGACACCATCT...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp AGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCAGATGGTGTCAGCAGTaGCTCCCAGGAATATCCAGT +
Preference number: 4 (lower is better)
Translates to: RHGRHFGRDLIWQKEVVSRWCQQ*LPGISS
Trigger: ACTGGATATTCCTGGGAGTCACTGCTGACACCATCT...GGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR GCA 90 bp GACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCTTCTTTCCCAGAAGGCGTTCTaGAGCTTGAAGATCATGCTG +
Preference number: 4 (lower is better)
Translates to: DLPRLRQITKFKAGALLLSQKAF*SLKIML
Trigger: CAGCATGATCTTCAAGCTGCAGAACGCCTTCTGGGA...AAGAAGGAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGATCCATGTGTTTCATaGCCAGCGACTGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DGGRHGRHFGRDLIWQKEDPCVS*PATGSS
Trigger: TGAACTTCCAGTCGCTGGCCATGAAACACATGGATC...TTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAGGACGGGATCTGATTTaGCAAAAGGAAGTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQGRDLI*QKEVVS
Trigger: GGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCC...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR TCA 90 bp GGCAGGAATGCTTGTTTCTGTCAGCCTCAGAAACCTCCTTCTATCCTGCTAGACACTTTGGACGGGATCTaGTTTGGCAAAAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GRNACFCQPQKPPSILLDTLDGI*FGKRKW
Trigger: CCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGT...GTCTAGCAGGATAGAAGGAGGTTTCTGAGGCTGACAGAAACAAGCATTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591986.1
CDS-3UTR CCA 90 bp GACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCTTCTTGATCCATGTGTTTCATaGCCAGCGACTGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DLPRLRQITKFKAGALLLDPCVS*PATGSS
Trigger: TGAACTTCCAGTCGCTGGCCATGAAACACATGGATC...AAGAAGGAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CCA 90 bp GCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTTTGGCAAAAGGAAGTaGTTTCCTGTCCCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: AWEALWTGSDLAKGSGFLFGKRK*FPVPSD
Trigger: ATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAA...CAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS GCA 90 bp CGCGGTCCAGGCTGCCGTAGGCGTCCGGCTGCAGGTAGAGCGGGGTaGGCGGCGACGACGGCCGTCCCTTGGGGGACAGCGGGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: RGPGCRRRPAAGRAG*AATTAVPWGTAGCR
Trigger: CCTACAGCCCGCTGTCCCCCAAGGGACGGCCGTCGTCGCCGCGCACCCCGCTCTACCTGCAGCCGGACGCCTACGGCAGCCTGGACCGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS GCA 90 bp GCAGCGTCAGGTCGTCTTGCGCGCGCAGAGGCGGGGCGAATGCGCTaGCGCCGGAGCCTAGCAGGGAGCTCCCGAAGGCGGACGCTGGCG +
Preference number: 5 (lower is better)
Translates to: AASGRLARAEAGRMR*RRSLAGSSRRRTLA
Trigger: CGCCAGCGTCCGCCTTCGGGAGCTCCCTGCTAGGCTCCGGCGGCAGCGCATTCGCCCCGCCTCTGCGCGCGCAAGACGACCTGACGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS TCA 90 bp CGACGGCCCCGCGGAGCCCAGCGAGCGCCGGTAGCTGCCCGCGTCTaGACGCCGGTCGCTGGCCAGAGGAGAGACCTTGTAATTGCGCGG +
Preference number: 5 (lower is better)
Translates to: RRPRGAQRAPVAARV*TPVAGQRRDLVIAR
Trigger: CCGCGCAATTACAAGGTCTCTCCTCTGGCCAGCGACCGGCGTTCAGACGCGGGCAGCTACCGGCGCTCGCTGGGCTCCGCGGGGCCGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS TCA 90 bp CCCACCACCAGTCGGTCTCCTCCGGCCCGTCCCTCCGCAGCACGGTaGCCGACTCGCCCTCGCGGAAGGACAGCTCGTCCCCGAACTCGG +
Preference number: 5 (lower is better)
Translates to: PTTSRSPPARPSAAR*PTRPRGRTARPRTR
Trigger: CCGAGTTCGGGGACGAGCTGTCCTTCCGCGAGGGCGAGTCGGTCACCGTGCTGCGGAGGGACGGGCCGGAGGAGACCGACTGGTGGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 90 bp GCAAAGTGCCCGACGGCCCCGCGGAGCCCAGCGAGCGCCGGTAGCTaGCCGCGTCTGAACGCCGGTCGCTGGCCAGAGGAGAGACCTTGT +
Preference number: 5 (lower is better)
Translates to: AKCPTAPRSPASAGS*PRLNAGRWPEERPC
Trigger: ACAAGGTCTCTCCTCTGGCCAGCGACCGGCGTTCAGACGCGGGCAGCTACCGGCGCTCGCTGGGCTCCGCGGGGCCGTCGGGCACTTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS GCA 90 bp GGGGAAGACTCAGTCCCGCGGCTGGCATCTGCGATGCCCCCGCCGTaGCCACCTCCCGCTCAGCAGCGCTCACCTCCTTCACCGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GEDSVPRLASAMPPP*PPPAQQRSPPSPPA
Trigger: AGCAGGCGGTGAAGGAGGTGAGCGCTGCTGAGCGGGAGGTGGGCACGGCGGGGGCATCGCAGATGCCAGCCGCGGGACTGAGTCTTCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589858.1
CDS GCA 90 bp TGCCACCTCCTCCAGCTCGGGCACCGACTGTGCCTCCGGTGGCAGTaGTGGCTGCAGCCTCGTGGGGCTGAGAGGCCTTGCTACAGGGCC +
Preference number: 5 (lower is better)
Translates to: CHLLQLGHRLCLRWQ*WLQPRGAERPCYRA
Trigger: GGCCCTGTAGCAAGGCCTCTCAGCCCCACGAGGCTGCAGCCAGCACTGCCACCGGAGGCACAGTCGGTGCCCGAGCTGGAGGAGGTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS GCA 90 bp TTCCGCCAACACCCGTGCCACCTCCTCCAGCTCGGGCACCGACTGTaGCTCCGGTGGCAGTGCTGGCTGCAGCCTCGTGGGGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: FRQHPCHLLQLGHRL*LRWQCWLQPRGAER
Trigger: CCTCTCAGCCCCACGAGGCTGCAGCCAGCACTGCCACCGGAGGCACAGTCGGTGCCCGAGCTGGAGGAGGTGGCACGGGTGTTGGCGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS CCA 90 bp CACCCGTGCCACCTCCTCCAGCTCGGGCACCGACTGTGCCTCCGGTaGCAGTGCTGGCTGCAGCCTCGTGGGGCTGAGAGGCCTTGCTAC +
Preference number: 5 (lower is better)
Translates to: HPCHLLQLGHRLCLR*QCWLQPRGAERPCY
Trigger: GTAGCAAGGCCTCTCAGCCCCACGAGGCTGCAGCCAGCACTGCCACCGGAGGCACAGTCGGTGCCCGAGCTGGAGGAGGTGGCACGGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS TCA 90 bp CCTCGCGGTAAGGGTCGCACTTCTCGAAGGCGGTGGCGCCGTCGCTaGGCGTGGTGGCGAAGATTGCAGCGCCGTGCTGCACCAGCGCCA +
Preference number: 5 (lower is better)
Translates to: PRGKGRTSRRRWRRR*AWWRRLQRRAAPAP
Trigger: TGGCGCTGGTGCAGCACGGCGCTGCAATCTTCGCCACCACGCTCAGCGACGGCGCCACCGCCTTCGAGAAGTGCGACCCTTACCGCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS CCA 90 bp TCATGTCCAGAAAGTCCCGCGCGCTCTGGAATGCCTCGCTGTCCATaGTGCCGGCCGGAGCGGGCGCGGATCCGGGCAGATCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: SCPESPARSGMPRCP*CRPERARIRADPGT
Trigger: GGTGCCAGGATCTGCCCGGATCCGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000593226.5
CDS CCA 90 bp CACCTCCTCCAGCTCGGGCACCGACTGTGCCTCCGGTGGCAGTGCTaGCTGCAGCCTCGTGGGGCTGAGAGGCCTTGCTACAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: HLLQLGHRLCLRWQC*LQPRGAERPCYRAF
Trigger: GAAGGCCCTGTAGCAAGGCCTCTCAGCCCCACGAGGCTGCAGCCAGCACTGCCACCGGAGGCACAGTCGGTGCCCGAGCTGGAGGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS GCA 90 bp CAGCGACTGGAAGTTCATGTCCAGAAAGTCCCGCGCGCTCTGGAATaGCTCGCTGTCCATGGTGCCGGCCGGAGCGGGCGCGGATCCGGG +
Preference number: 5 (lower is better)
Translates to: QRLEVHVQKVPRALE*LAVHGAGRSGRGSG
Trigger: CCCGGATCCGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGAACTTCCAGTCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000593226.5
CDS GCA 90 bp TGCGGGCCAGGAGGCGCGGGAGAGTCTGACCACAGCGACTCCAGCTaGTTGGTCAGTTCATCCACCTTGGCCGCCGCCGTGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CGPGGAGESDHSDSS*LVSSSTLAAAVSSS
Trigger: GGAGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTCTCCCGCGCCTCCTGGCCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS GCA 90 bp GTGGCGCCGTCGCTGAGCGTGGTGGCGAAGATTGCAGCGCCGTGCTaGACCAGCGCCATGCAGATGACTGTGTCGTTGCACGACGCCGCG +
Preference number: 5 (lower is better)
Translates to: VAPSLSVVAKIAAPC*TSAMQMTVSLHDAA
Trigger: CGCGGCGTCGTGCAACGACACAGTCATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAATCTTCGCCACCACGCTCAGCGACGGCGCCAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 90 bp GCGGTGGCGCCGTCGCTGAGCGTGGTGGCGAAGATTGCAGCGCCGTaGTGCACCAGCGCCATGCAGATGACTGTGTCGTTGCACGACGCC +
Preference number: 5 (lower is better)
Translates to: AVAPSLSVVAKIAAP*CTSAMQMTVSLHDA
Trigger: GGCGTCGTGCAACGACACAGTCATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAATCTTCGCCACCACGCTCAGCGACGGCGCCACCGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS TCA 90 bp CCTAGAAGGGGGTCCGGCCTGCGGGCCAGGAGGCGCGGGAGAGTCTaGCCACAGCGACTCCAGCTGCTTGGTCAGTTCATCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: PRRGSGLRARRRGRV*PQRLQLLGQFIHLG
Trigger: GCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTCTCCCGCGCCTCCTGGCCCGCAGGCCGGACCCCCTTCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000593226.5
CDS TCA 90 bp AAGGCAGTGATGCCCTCCTCGTTGGGCTGGCTCGGGTCGTTCATCTaGGTGCACCGGGGGAGGGGGAAGACTCAGTCCCGCGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: KAVMPSSLGWLGSFI*VHRGRGKTQSRGWH
Trigger: ATGCCAGCCGCGGGACTGAGTCTTCCCCCTCCCCCGGTGCACTCAGATGAACGACCCGAGCCAGCCCAACGAGGAGGGCATCACTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589858.1
CDS GCA 90 bp CAGCGACTGGAAGTTCATGTCCAGAAAGTCCCGCGCGCTCTGGAATaGCTCGCTGTCCATGGTGCCGGCCGGAGCGGGCGCCTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: QRLEVHVQKVPRALE*LAVHGAGRSGRLSL
Trigger: GAGACTGAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGAACTTCCAGTCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592134.1
CDS CCA 90 bp ATGGCCAGCGACTGGAAGTTCATGTCCAGAAAGTCCCGCGCGCTCTaGAATGCCTCGCTGTCCATGGTGCCGGCCGGAGCGGGCGCGGAT +
Preference number: 5 (lower is better)
Translates to: MASDWKFMSRKSRAL*NASLSMVPAGAGAD
Trigger: ATCCGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGAACTTCCAGTCGCTGGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000593226.5
CDS CCA 90 bp GGCCAGGAGGCGCGGGAGAGTCTGACCACAGCGACTCCAGCTGCTTaGTCAGTTCATCCACCTTGGCCGCCGCCGTGTCCAGCTCCATCT +
Preference number: 5 (lower is better)
Translates to: GQEARESLTTATPAA*SVHPPWPPPCPAPS
Trigger: AGATGGAGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTCTCCCGCGCCTCCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS CCA 90 bp ATGGCCAGCGACTGGAAGTTCATGTCCAGAAAGTCCCGCGCGCTCTaGAATGCCTCGCTGTCCATGGTGCCGGCCGGAGCGGGCGCCTGT +
Preference number: 5 (lower is better)
Translates to: MASDWKFMSRKSRAL*NASLSMVPAGAGAC
Trigger: ACAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGAACTTCCAGTCGCTGGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418234.6
ENST00000585905.1
CDS CCA 90 bp ATGGCCAGCGACTGGAAGTTCATGTCCAGAAAGTCCCGCGCGCTCTaGAATGCCTCGCTGTCCATGGTGCCGGCCGGAGCGGGCGCCTCA +
Preference number: 5 (lower is better)
Translates to: MASDWKFMSRKSRAL*NASLSMVPAGAGAS
Trigger: TGAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGAACTTCCAGTCGCTGGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592134.1
CDS-3UTR CAA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGAAGGAGCACCAGAGGGTaGAGGCGCGCGCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRRSTRG*RRARRA
Trigger: GGCCCGCCGCGCGCGCCTCAACCCTCTGGTGCTCCT...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS TCA 90 bp TGGTGGCGAAGATTGCAGCGCCGTGCTGCACCAGCGCCATGCAGATaGCTGTGTCGTTGCACGACGCCGCGCAGTGCAAGGGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WWRRLQRRAAPAPCR*LCRCTTPRSARVSS
Trigger: GCTGGACACCCTTGCACTGCGCGGCGTCGTGCAACGACACAGTCATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAATCTTCGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 90 bp CTTCTCGAAGGCGGTGGCGCCGTCGCTGAGCGTGGTGGCGAAGATTaGAGCGCCGTGCTGCACCAGCGCCATGCAGATGACTGTGTCGTT +
Preference number: 5 (lower is better)
Translates to: LLEGGGAVAERGGED*SAVLHQRHADDCVV
Trigger: AACGACACAGTCATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAATCTTCGCCACCACGCTCAGCGACGGCGCCACCGCCTTCGAGAAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 90 bp CAGCGACTGGAAGTTCATGTCCAGAAAGTCCCGCGCGCTCTGGAATaGCTCGCTGTCCATGGTGCCGGCCGGAGCGGGCGCCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: QRLEVHVQKVPRALE*LAVHGAGRSGRLSL
Trigger: AAGAGACAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGAACTTCCAGTCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418234.6
ENST00000585905.1
CDS-3UTR CAA 90 bp ACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCAGGAATCAGCGTCAGGTCGTCTaGCGCGCGCAGAGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: TQTPRLLGEMVSAVTPRNQRQVV*RAQRRG
Trigger: GCCCCGCCTCTGCGCGCGCAAGACGACCTGACGCTG...ATTCCTGGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS GCA 90 bp CAGCTCGTCCCCGAACTCGGCGCTGTAGTCCCAGAGAGCGTACACTaGCCCGCTGTTCATCAGCCCCATACTCTGCTCGACGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QLVPELGAVVPESVH*PAVHQPHTLLDVCQ
Trigger: CTGGCAGACGTCGAGCAGAGTATGGGGCTGATGAACAGCGGGGCAGTGTACGCTCTCTGGGACTACAGCGCCGAGTTCGGGGACGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS-3UTR CAA 90 bp GGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGCGTGATGCCCTCCTCGTaGGGCTGGCTCGGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: GVSSDSQEYPVVWWPIPGVMPSS*GWLGSF
Trigger: GAACGACCCGAGCCAGCCCAACGAGGAGGGCATCAC...GCCTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp TTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCGTCAGTTCATCCACCTaGGCCGCCGCCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FPTQTPRLLGEMVSAVTPVSSST*AAAVSS
Trigger: GCTGGACACGGCGGCGGCCAAGGTGGATGAACTGAC...GGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp TGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGTCGGCGAGGCAGGCCTaGCGAAGACGTCCAGGCGTT +
Preference number: 5 (lower is better)
Translates to: WLAGGCDDGGRHGRHFGRSARQA*RRRPGV
Trigger: AACGCCTGGACGTCTTCGCAAGGCCTGCCTCGCCGA...CCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp TTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCAGGAGCACCAGAGGGTaGAGGCGCGCGCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: FPDLPRLRQITKFKAGALRSTRG*RRARRA
Trigger: GGCCCGCCGCGCGCGCCTCAACCCTCTGGTGCTCCT...GAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp TGGCTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGTGATGCCCTCCTCGTaGGGCTGGCTCGGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: WLAGGCDDGGRHGRHFGRVMPSS*GWLGSF
Trigger: GAACGACCCGAGCCAGCCCAACGAGGAGGGCATCAC...CCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS CCA 90 bp TCATGTCCAGAAAGTCCCGCGCGCTCTGGAATGCCTCGCTGTCCATaGTGCCGGCCGGAGCGGGCGCCTGTCTCTTCAAGAATTTCAGAC +
Preference number: 5 (lower is better)
Translates to: SCPESPARSGMPRCP*CRPERAPVSSRISD
Trigger: GTCTGAAATTCTTGAAGAGACAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418234.6
CDS-3UTR CAA 90 bp ATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCATCCCAGGTCAGTTCATCCACCTaGGCCGCCGCCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: MVSAVTPRNIQWCGGPSQVSSST*AAAVSS
Trigger: GCTGGACACGGCGGCGGCCAAGGTGGATGAACTGAC...CTGGGATGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp CAGCCCTTCCCAGACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGCAGCGTCAGGTCGTCTaGCGCGCGCAGAGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: QPFPDLPRLRQITKFKAGQRQVV*RAQRRG
Trigger: GCCCCGCCTCTGCGCGCGCAAGACGACCTGACGCTG...CCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTCTGGGAAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGGGGCTGTGGTTGTGGTaGGGGCTGCAGCTTAGGCGG +
Preference number: 5 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVGLWLW*GLQLRR
Trigger: CCGCCTAAGCTGCAGCCCCAACCACAACCACAGCCC...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp GGAGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCAGCGCCGCAGATGGCGTaGTGCAAGGCAGTGATGCCC +
Preference number: 5 (lower is better)
Translates to: GEMVSAVTPRNIQWCGGPAPQMA*CKAVMP
Trigger: GGGCATCACTGCCTTGCACAACGCCATCTGCGGCGC...TGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp GACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGGCGCCGCAGATGGCGTaGTGCAAGGCAGTGATGCCC +
Preference number: 5 (lower is better)
Translates to: DQCFPPRPQDCWERWCQQAPQMA*CKAVMP
Trigger: GGGCATCACTGCCTTGCACAACGCCATCTGCGGCGC...CTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp GGAGAGATGGTGTCAGCAGTGACTCCCAGGAATATCCAGTGGTGTGGTGGCCCAGCGTGGTGGCGAAGATaGCAGCGCCGTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: GEMVSAVTPRNIQWCGGPAWWRR*QRRAAP
Trigger: TGGTGCAGCACGGCGCTGCAATCTTCGCCACCACGC...TGGGCCACCACACCACTGGATATTCCTGGGAGTCACTGCTGACACCATCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp ACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTTCGGCGAGGCAGGCCTaGCGAAGACGTCCAGGCGTT +
Preference number: 5 (lower is better)
Translates to: TNVSHPDPKTAGRDGVSSSARQA*RRRPGV
Trigger: AACGCCTGGACGTCTTCGCAAGGCCTGCCTCGCCGA...ACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp GTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCGGGCTGTGGTTGTGGTaGGGGCTGCAGCTTAGGCGG +
Preference number: 5 (lower is better)
Translates to: VETNVSHPDPKTAGRDGVGLWLW*GLQLRR
Trigger: CCGCCTAAGCTGCAGCCCCAACCACAACCACAGCCC...GACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp TGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGCTGGTACTGTTTCTaGTGGGTAGGGGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WGRDPGRDQCFPPRPQDCCWYCF*WVGGRA
Trigger: GGCCCTGCCCCCTACCCACAAGAAACAGTACCAGCA...GCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp ACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCAGGAATCAGATGACTGTGTCGTaGCACGACGCCGCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: TQTPRLLGEMVSAVTPRNQMTVS*HDAAQC
Trigger: GCACTGCGCGGCGTCGTGCAACGACACAGTCATCTG...ATTCCTGGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp CTTGCTGGGGGATGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCAGATGACTGTGTCGTaGCACGACGCCGCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LAGGCDDGGRHGRHFGRDQMTVS*HDAAQC
Trigger: GCACTGCGCGGCGTCGTGCAACGACACAGTCATCTG...ATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCCCAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp CCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGCTGGTACTGTTTCTaGTGGGTAGGGGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PGRDQCFPPRPQDCWERWCWYCF*WVGGRA
Trigger: GGCCCTGCCCCCTACCCACAAGAAACAGTACCAGCA...CCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp ATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATTGGCTGTCGGGGGAGTaGACATTGGCACCCGCGGTG +
Preference number: 5 (lower is better)
Translates to: ILVETNVSHPDPKTAGRDWLSGE*TLAPAV
Trigger: CACCGCGGGTGCCAATGTCAACTCCCCCGACAGCCA...ATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS CCA 90 bp AGTCTGACCACAGCGACTCCAGCTGCTTGGTCAGTTCATCCACCTTaGCCGCCGCCGTGTCCAGCTCCATCTGCTTCAGATCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: SLTTATPAAWSVHPP*PPPCPAPSASDPCV
Trigger: AACACATGGATCTGAAGCAGATGGAGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS-3UTR CAA 90 bp AGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACCCCAAGAGCGACTCCAGCTGCTaGGTCAGTTCATCCACCTTG +
Preference number: 5 (lower is better)
Translates to: RGGAGILVETNVSHPDPKSDSSC*VSSSTL
Trigger: CAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCT...CTTGGGGTCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGTGTAGGGGTGTAGGGTaGGGGCACTCTCTGATCGTC +
Preference number: 5 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVCRGVG*GHSLIV
Trigger: GACGATCAGAGAGTGCCCCAACCCTACACCCCTACA...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp GATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAATGGCTGTCGGGGGAGTaGACATTGGCACCCGCGGTG +
Preference number: 5 (lower is better)
Translates to: DGGRHGRHFGRDLIWQKEWLSGE*TLAPAV
Trigger: CACCGCGGGTGCCAATGTCAACTCCCCCGACAGCCA...TTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp ACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGTGATTTCCAGCGCGTGGTGGCGAAGATaGCAGCGCCGTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: TGSDLAKGSGFLSPVISSAWWRR*QRRAAP
Trigger: TGGTGCAGCACGGCGCTGCAATCTTCGCCACCACGC...GCTGGAAATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp ACGGGATCTGATTTGGCAAAAGGAAGTGGTTTCCTGTCCCCAGTGATTTCCAGCTCGGGGGAGTTGACATaGGCACCCGCGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: TGSDLAKGSGFLSPVISSSGELT*APAVMR
Trigger: CCTCATCACCGCGGGTGCCAATGTCAACTCCCCCGA...GCTGGAAATCACTGGGGACAGGAAACCACTTCCTTTTGCCAAATCAGATCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp GACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCTTCTTTCGGGGGAGTTGACATaGGCACCCGCGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: DLPRLRQITKFKAGALLLSGELT*APAVMR
Trigger: CCTCATCACCGCGGGTGCCAATGTCAACTCCCCCGA...AAGAAGGAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS TCA 90 bp TCCACCTGGTCAGAAGGTGCAGGAAGAATTCAGAGCTCTGAGAATTaGGGCCTCAGGAAGAAGAGAGGATCCGGGCAGATCCTGGCACCT +
Preference number: 5 (lower is better)
Translates to: STWSEGAGRIQSSEN*GLRKKRGSGQILAP
Trigger: AGGTGCCAGGATCTGCCCGGATCCTCTCTTCTTCCTGAGGCCTCAATTCTCAGAGCTCTGAATTCTTCCTGCACCTTCTGACCAGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592134.1
CDS-3UTR CAA 90 bp ATTGGGGAGAGGTGGGGCAGGGATCCTGGTAGAGACCAATGTTTCCCACCCAGACTAGACTTTACTCCTTaGAGGCTTCACCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: IGERWGRDPGRDQCFPPRLDFTP*RLHPGE
Trigger: TTCCCCAGGGTGAAGCCTCAAAGGAGTAAAGTCTAG...TCTGGGTGGGAAACATTGGTCTCTACCAGGATCCCTGCCCCACCTCTCCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CAA 90 bp CCAATGTTTCCCACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGCTAGACTTTACTCCTTaGAGGCTTCACCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: PMFPTQTPRLLGEMVSAVLDFTP*RLHPGE
Trigger: TTCCCCAGGGTGAAGCCTCAAAGGAGTAAAGTCTAG...CACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGTGGGAAACATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CAA 90 bp ACCCAGACCCCAAGACTGCTGGGAGAGATGGTGTCAGCAGTGACTCCCAGGAATGGAAGGCAGGAATGCTaGTTTCTGTCAGCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: TQTPRLLGEMVSAVTPRNGRQEC*FLSASE
Trigger: TTCTGAGGCTGACAGAAACAAGCATTCCTGCCTTCC...ATTCCTGGGAGTCACTGCTGACACCATCTCTCCCAGCAGTCTTGGGGTCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CAA 90 bp TGTGATGATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAGCGACTCCAGCTGCTaGGTCAGTTCATCCACCTTG +
Preference number: 5 (lower is better)
Translates to: CDDGGRHGRHFGRDLIWQSDSSC*VSSSTL
Trigger: CAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCT...TTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000418234.6
CDS-3UTR CAA 90 bp GATGGTGGTAGGCATGGGAGGCACTTTGGACGGGATCTGATTTGGCAAAAGGAAGGAAGGCAGGAATGCTaGTTTCTGTCAGCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: DGGRHGRHFGRDLIWQKEGRQEC*FLSASE
Trigger: TTCTGAGGCTGACAGAAACAAGCATTCCTGCCTTCC...TTCCTTTTGCCAAATCAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS-3UTR CAA 90 bp GACCTCCCAAGGCTAAGGCAGATTACTAAATTTAAGGCTGGGGCCCTCCTTCTTCTAGACTTTACTCCTTaGAGGCTTCACCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: DLPRLRQITKFKAGALLLLDFTP*RLHPGE
Trigger: TTCCCCAGGGTGAAGCCTCAAAGGAGTAAAGTCTAG...AAGAAGGAGGGCCCCAGCCTTAAATTTAGTAATCTGCCTTAGCCTTGGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000591986.1
CDS TCA 90 bp ATTTCCCTTTTACACTCAAGAAAATTGAGGCCCAGTGAGGTTAAGTaGCTTGCCCAAGGTCACACAGCGTGGAACCAGGCAGTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: ISLLHSRKLRPSEVK*LAQGHTAWNQAVWL
Trigger: AAGCCAGACTGCCTGGTTCCACGCTGTGTGACCTTGGGCAAGTCACTTAACCTCACTGGGCCTCAATTTTCTTGAGTGTAAAAGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585905.1
CDS TCA 90 bp TGGCGCTTTACATGCCTACCTTATTGTAATCTCACCACTGCTTTGTaGGGTAGATACACTGCCATCTCCACATTACCGAAAGGGAATCTG +
Preference number: 5 (lower is better)
Translates to: WRFTCLPYCNLTTAL*GRYTAISTLPKGNL
Trigger: CAGATTCCCTTTCGGTAATGTGGAGATGGCAGTGTATCTACCTCACAAAGCAGTGGTGAGATTACAATAAGGTAGGCATGTAAAGCGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587270.5
CDS TCA 90 bp GAATCTACTTCTACCAACCGTGATAGATGTGATTTTCTGAGATCCTaGGAGTTTCCTCTCCTAACATCTCAGGCAGAAAACTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ESTSTNRDRCDFLRS*EFPLLTSQAENSSR
Trigger: CCTGCTGGAGTTTTCTGCCTGAGATGTTAGGAGAGGAAACTCTCAGGATCTCAGAAAATCACATCTATCACGGTTGGTAGAAGTAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587270.5
CDS GCA 72 bp CCGACGGCCCCGCGGAGCCCAGCGAGCGCCGGTAGCTaGCCGCGTCTGAACGCCGGTCGCTGGCCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: PTAPRSPASAGS*PRLNAGRWPEE
Trigger: CTCCTCTGGCCAGCGACCGGCGTTCAGACGCGGGCAGCTACCGGCGCTCGCTGGGCTCCGCGGGGCCGTCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS GCA 72 bp GGCTGCCGTAGGCGTCCGGCTGCAGGTAGAGCGGGGTaGGCGGCGACGACGGCCGTCCCTTGGGGGACAGCG +
Preference number: 6 (lower is better)
Translates to: GCRRRPAAGRAG*AATTAVPWGTA
Trigger: CGCTGTCCCCCAAGGGACGGCCGTCGTCGCCGCGCACCCCGCTCTACCTGCAGCCGGACGCCTACGGCAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS CAA 90 bp GCGTCCAGGAGGAGCACCAGAGGGTTGAGGCGCGCGCGGCGGGCCTaGCGCGGGGAGCCCGCCTTCCGCAGCACAGAGCGCATCTCCATG +
Preference number: 6 (lower is better)
Translates to: ASRRSTRGLRRARRA*RGEPAFRSTERISM
Trigger: CATGGAGATGCGCTCTGTGCTGCGGAAGGCGGGCTCCCCGCGCAAGGCCCGCCGCGCGCGCCTCAACCCTCTGGTGCTCCTCCTGGACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS TCA 72 bp AGTCGGTCTCCTCCGGCCCGTCCCTCCGCAGCACGGTaGCCGACTCGCCCTCGCGGAAGGACAGCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: SRSPPARPSAAR*PTRPRGRTARP
Trigger: GGGACGAGCTGTCCTTCCGCGAGGGCGAGTCGGTCACCGTGCTGCGGAGGGACGGGCCGGAGGAGACCGACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 72 bp AGTCCCGCGCGCTCTGGAATGCCTCGCTGTCCATGGTaGCGGCCGGAGCGGGCGCGGATCCGGGCAGATCCT +
Preference number: 6 (lower is better)
Translates to: SPARSGMPRCPW*RPERARIRADP
Trigger: AGGATCTGCCCGGATCCGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000593226.5
CDS GCA 72 bp TCCCGCTCAGCAGCGCTCACCTCCTTCACCGCCTGCTaGACCACCTCCAGCTCCCCGGTCAGCGCCGCGTCC +
Preference number: 6 (lower is better)
Translates to: SRSAALTSFTAC*TTSSSPVSAAS
Trigger: GGACGCGGCGCTGACCGGGGAGCTGGAGGTGGTGCAGCAGGCGGTGAAGGAGGTGAGCGCTGCTGAGCGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589858.1
CDS GCA 72 bp ACCTCCCGCTCAGCAGCGCTCACCTCCTTCACCGCCTaGTGCACCACCTCCAGCTCCCCGGTCAGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: TSRSAALTSFTA*CTTSSSPVSAA
Trigger: CGCGGCGCTGACCGGGGAGCTGGAGGTGGTGCAGCAGGCGGTGAAGGAGGTGAGCGCTGCTGAGCGGGAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589858.1
CDS GCA 72 bp AGGGGGAAGACTCAGTCCCGCGGCTGGCATCTGCGATaGCCCCGCCGTGCCCACCTCCCGCTCAGCAGCGCT +
Preference number: 6 (lower is better)
Translates to: RGKTQSRGWHLR*PRRAHLPLSSA
Trigger: AGCGCTGCTGAGCGGGAGGTGGGCACGGCGGGGGCATCGCAGATGCCAGCCGCGGGACTGAGTCTTCCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589858.1
CDS TCA 72 bp CGCGGAGCCCAGCGAGCGCCGGTAGCTGCCCGCGTCTaGACGCCGGTCGCTGGCCAGAGGAGAGACCTTGTA +
Preference number: 6 (lower is better)
Translates to: RGAQRAPVAARV*TPVAGQRRDLV
Trigger: TACAAGGTCTCTCCTCTGGCCAGCGACCGGCGTTCAGACGCGGGCAGCTACCGGCGCTCGCTGGGCTCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS GCA 72 bp CTCCAGCTCGGGCACCGACTGTGCCTCCGGTGGCAGTaGTGGCTGCAGCCTCGTGGGGCTGAGAGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: LQLGHRLCLRWQ*WLQPRGAERPC
Trigger: GCAAGGCCTCTCAGCCCCACGAGGCTGCAGCCAGCACTGCCACCGGAGGCACAGTCGGTGCCCGAGCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS GCA 72 bp GGCTGGCTCGGGTCGTTCATCTCCTTCACCGCCTGCTaGACCACCTCCAGCTCCCCGGTCAGCGCCGCGTCC +
Preference number: 6 (lower is better)
Translates to: GWLGSFISFTAC*TTSSSPVSAAS
Trigger: GGACGCGGCGCTGACCGGGGAGCTGGAGGTGGTGCAGCAGGCGGTGAAGGAGATGAACGACCCGAGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS GCA 72 bp TCAGTCCCGCGGCTGGCATCTGCGATGCCCCCGCCGTaGCCACCTCCCGCTCAGCAGCGCTCACCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: SVPRLASAMPPP*PPPAQQRSPPS
Trigger: TGAAGGAGGTGAGCGCTGCTGAGCGGGAGGTGGGCACGGCGGGGGCATCGCAGATGCCAGCCGCGGGACTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589858.1
CDS CCA 72 bp GAAAGTCCCGCGCGCTCTGGAATGCCTCGCTGTCCATaGTGCCGGCCGGAGCGGGCGCGGATCCGGGCAGAT +
Preference number: 6 (lower is better)
Translates to: ESPARSGMPRCP*CRPERARIRAD
Trigger: ATCTGCCCGGATCCGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360957.10
ENST00000593226.5
CDS CCA 72 bp CACCTCCTCCAGCTCGGGCACCGACTGTGCCTCCGGTaGCAGTGCTGGCTGCAGCCTCGTGGGGCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: HLLQLGHRLCLR*QCWLQPRGAER
Trigger: CCTCTCAGCCCCACGAGGCTGCAGCCAGCACTGCCACCGGAGGCACAGTCGGTGCCCGAGCTGGAGGAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS GCA 72 bp TTCCGCAGCACAGAGCGCATCTCCATGCTCTGCGGCTaGTCTGGTGGGCTGCTCTGGGACGGGGCCGGGGGT +
Preference number: 6 (lower is better)
Translates to: FRSTERISMLCG*SGGLLWDGAGG
Trigger: ACCCCCGGCCCCGTCCCAGAGCAGCCCACCAGAGCAGCCGCAGAGCATGGAGATGCGCTCTGTGCTGCGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS GCA 72 bp GGCGGTGGCGCCGTCGCTGAGCGTGGTGGCGAAGATTaGAGCGCCGTGCTGCACCAGCGCCATGCAGATGAC +
Preference number: 6 (lower is better)
Translates to: GGGAVAERGGED*SAVLHQRHADD
Trigger: GTCATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAATCTTCGCCACCACGCTCAGCGACGGCGCCACCGCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 72 bp AGTCCCGCGCGCTCTGGAATGCCTCGCTGTCCATGGTaGCGGCCGGAGCGGGCGCCTCAGTCTCGTAATCCG +
Preference number: 6 (lower is better)
Translates to: SPARSGMPRCPW*RPERAPQSRNP
Trigger: CGGATTACGAGACTGAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592134.1
CDS CCA 72 bp ATCTCCATGCTCTGCGGCTGCTCTGGTGGGCTGCTCTaGGACGGGGCCGGGGGTGGAATGGGAGCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: ISMLCGCSGGLL*DGAGGGMGAGG
Trigger: CCCACCAGCTCCCATTCCACCCCCGGCCCCGTCCCAGAGCAGCCCACCAGAGCAGCCGCAGAGCATGGAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS CCA 72 bp CACAGAGCGCATCTCCATGCTCTGCGGCTGCTCTGGTaGGCTGCTCTGGGACGGGGCCGGGGGTGGAATGGG +
Preference number: 6 (lower is better)
Translates to: HRAHLHALRLLW*AALGRGRGWNG
Trigger: CCCATTCCACCCCCGGCCCCGTCCCAGAGCAGCCCACCAGAGCAGCCGCAGAGCATGGAGATGCGCTCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS TCA 72 bp GGGTCCGGCCTGCGGGCCAGGAGGCGCGGGAGAGTCTaGCCACAGCGACTCCAGCTGCTTGGTCAGTTCATC +
Preference number: 6 (lower is better)
Translates to: GSGLRARRRGRV*PQRLQLLGQFI
Trigger: GATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTCTCCCGCGCCTCCTGGCCCGCAGGCCGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000593226.5
CDS GCA 72 bp CCTCCTCGTTGGGCTGGCTCGGGTCGTTCATCTGAGTaGACCGGGGGAGGGGGAAGACTCAGTCCCGCGGCT +
Preference number: 6 (lower is better)
Translates to: PPRWAGSGRSSE*TGGGGRLSPAA
Trigger: AGCCGCGGGACTGAGTCTTCCCCCTCCCCCGGTGCACTCAGATGAACGACCCGAGCCAGCCCAACGAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589858.1
CDS CCA 72 bp AGCGCCGGTAGCTGCCCGCGTCTGAACGCCGGTCGCTaGCCAGAGGAGAGACCTTGTAATTGCGCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: SAGSCPRLNAGR*PEERPCNCAAG
Trigger: CCCTGCCGCGCAATTACAAGGTCTCTCCTCTGGCCAGCGACCGGCGTTCAGACGCGGGCAGCTACCGGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS CCA 72 bp CAGCACAGAGCGCATCTCCATGCTCTGCGGCTGCTCTaGTGGGCTGCTCTGGGACGGGGCCGGGGGTGGAAT +
Preference number: 6 (lower is better)
Translates to: QHRAHLHALRLL*WAALGRGRGWN
Trigger: ATTCCACCCCCGGCCCCGTCCCAGAGCAGCCCACCAGAGCAGCCGCAGAGCATGGAGATGCGCTCTGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS CAA 90 bp GGGCCAGGAGGCGCGGGAGAGTCTGACCACAGCGACTCCAGCTGCTaGGTCAGTTCATCCACCTTGGCCGCCGCCGTGTCCAGCTCCATC +
Preference number: 6 (lower is better)
Translates to: GPGGAGESDHSDSSC*VSSSTLAAAVSSSI
Trigger: GATGGAGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTCTCCCGCGCCTCCTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS TCA 72 bp AAGGGTCGCACTTCTCGAAGGCGGTGGCGCCGTCGCTaGGCGTGGTGGCGAAGATTGCAGCGCCGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: KGRTSRRRWRRR*AWWRRLQRRAA
Trigger: TGCAGCACGGCGCTGCAATCTTCGCCACCACGCTCAGCGACGGCGCCACCGCCTTCGAGAAGTGCGACCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 72 bp GAAGTTCATGTCCAGAAAGTCCCGCGCGCTCTGGAATaGCTCGCTGTCCATGGTGCCGGCCGGAGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: EVHVQKVPRALE*LAVHGAGRSGR
Trigger: GCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGAACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS GCA 72 bp GGAGGCGCGGGAGAGTCTGACCACAGCGACTCCAGCTaGTTGGTCAGTTCATCCACCTTGGCCGCCGCCGTG +
Preference number: 6 (lower is better)
Translates to: GGAGESDHSDSS*LVSSSTLAAAV
Trigger: CACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTCTCCCGCGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS CCA 72 bp GAAAGTCCCGCGCGCTCTGGAATGCCTCGCTGTCCATaGTGCCGGCCGGAGCGGGCGCCTGTCTCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: ESPARSGMPRCP*CRPERAPVSSR
Trigger: TCTTGAAGAGACAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418234.6
ENST00000585905.1
CDS CCA 72 bp GAAAGTCCCGCGCGCTCTGGAATGCCTCGCTGTCCATaGTGCCGGCCGGAGCGGGCGCCTCAGTCTCGTAAT +
Preference number: 6 (lower is better)
Translates to: ESPARSGMPRCP*CRPERAPQSRN
Trigger: ATTACGAGACTGAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592134.1
CDS CAA 72 bp GGCGCGGGAGAGTCTGACCACAGCGACTCCAGCTGCTaGGTCAGTTCATCCACCTTGGCCGCCGCCGTGTCC +
Preference number: 6 (lower is better)
Translates to: GAGESDHSDSSC*VSSSTLAAAVS
Trigger: GGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTCTCCCGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS CAA 90 bp ATTGCAGCGCCGTGCTGCACCAGCGCCATGCAGATGACTGTGTCGTaGCACGACGCCGCGCAGTGCAAGGGTGTCCAGCCGTGGCTGTCG +
Preference number: 6 (lower is better)
Translates to: IAAPCCTSAMQMTVS*HDAAQCKGVQPWLS
Trigger: CGACAGCCACGGCTGGACACCCTTGCACTGCGCGGCGTCGTGCAACGACACAGTCATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 72 bp AGTCCCGCGCGCTCTGGAATGCCTCGCTGTCCATGGTaGCGGCCGGAGCGGGCGCCTGTCTCTTCAAGAATT +
Preference number: 6 (lower is better)
Translates to: SPARSGMPRCPW*RPERAPVSSRI
Trigger: AATTCTTGAAGAGACAGGCGCCCGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418234.6
ENST00000585905.1
CDS CCA 72 bp GCGCGGGAGAGTCTGACCACAGCGACTCCAGCTGCTTaGTCAGTTCATCCACCTTGGCCGCCGCCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: ARESLTTATPAA*SVHPPWPPPCP
Trigger: TGGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTCTCCCGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS TCA 72 bp AGATTGCAGCGCCGTGCTGCACCAGCGCCATGCAGATaGCTGTGTCGTTGCACGACGCCGCGCAGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: RLQRRAAPAPCR*LCRCTTPRSAR
Trigger: CCTTGCACTGCGCGGCGTCGTGCAACGACACAGTCATCTGCATGGCGCTGGTGCAGCACGGCGCTGCAATCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS GCA 72 bp CCAAGGCAACAGCTGCAGGCTCGGCGAGGCAGGCCTTaGGAAGACGTCCAGGCGTTCATAGCTCGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PRQQLQARRGRP*EDVQAFIARCL
Trigger: CAGACAGCGAGCTATGAACGCCTGGACGTCTTCGCAAGGCCTGCCTCGCCGAGCCTGCAGCTGTTGCCTTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
CDS CCA 72 bp GACTGGAAGTTCATGTCCAGAAAGTCCCGCGCGCTCTaGAATGCCTCGCTGTCCATGGTGCCGGCCGGAGCG +
Preference number: 6 (lower is better)
Translates to: DWKFMSRKSRAL*NASLSMVPAGA
Trigger: CGCTCCGGCCGGCACCATGGACAGCGAGGCATTCCAGAGCGCGCGGGACTTTCTGGACATGAACTTCCAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS CCA 72 bp GCGTTGTGCAAGGCAGTGATGCCCTCCTCGTTGGGCTaGCTCGGGTCGTTCATCTCCTTCACCGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ALCKAVMPSSLG*LGSFISFTACC
Trigger: GCAGCAGGCGGTGAAGGAGATGAACGACCCGAGCCAGCCCAACGAGGAGGGCATCACTGCCTTGCACAACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS GCA 72 bp CCCGAACTCGGCGCTGTAGTCCCAGAGAGCGTACACTaGCCCGCTGTTCATCAGCCCCATACTCTGCTCGAC +
Preference number: 6 (lower is better)
Translates to: PELGAVVPESVH*PAVHQPHTLLD
Trigger: GTCGAGCAGAGTATGGGGCTGATGAACAGCGGGGCAGTGTACGCTCTCTGGGACTACAGCGCCGAGTTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS CAA 72 bp CACAGCGACTCCAGCTGCTTGGTCAGTTCATCCACCTaGGCCGCCGCCGTGTCCAGCTCCATCTGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: HSDSSCLVSSST*AAAVSSSICFR
Trigger: TCTGAAGCAGATGGAGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS CCA 72 bp ACAGCGACTCCAGCTGCTTGGTCAGTTCATCCACCTTaGCCGCCGCCGTGTCCAGCTCCATCTGCTTCAGAT +
Preference number: 6 (lower is better)
Translates to: TATPAAWSVHPP*PPPCPAPSASD
Trigger: ATCTGAAGCAGATGGAGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS CAA 72 bp AAGGGTGTCCAGCCGTGGCTGTCGGGGGAGTTGACATaGGCACCCGCGGTGATGAGGAAATCCACGATAGAG +
Preference number: 6 (lower is better)
Translates to: KGVQPWLSGELT*APAVMRKSTIE
Trigger: CTCTATCGTGGATTTCCTCATCACCGCGGGTGCCAATGTCAACTCCCCCGACAGCCACGGCTGGACACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
ENST00000589858.1
CDS CAA 90 bp GAGTCTGACCACAGCGACTCCAGCTGCTTGGTCAGTTCATCCACCTaGGCCGCCGCCGTGTCCAGCTCCATCTGCTTCAGATCCATGTGT +
Preference number: 6 (lower is better)
Translates to: ESDHSDSSCLVSSST*AAAVSSSICFRSMC
Trigger: ACACATGGATCTGAAGCAGATGGAGCTGGACACGGCGGCGGCCAAGGTGGATGAACTGACCAAGCAGCTGGAGTCGCTGTGGTCAGACTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000585905.1
ENST00000592134.1
ENST00000593226.5
CDS CAA 90 bp TGTCAGCCTCAGAAACCTCCTTCTATCCTGCTAGACTTTACTCCTTaGAGGCTTCACCCTGGGGAACAGCTGCCAGGTAGGTGGCGCAGT +
Preference number: 6 (lower is better)
Translates to: CQPQKPPSILLDFTP*RLHPGEQLPGRWRS
Trigger: ACTGCGCCACCTACCTGGCAGCTGTTCCCCAGGGTGAAGCCTCAAAGGAGTAAAGTCTAGCAGGATAGAAGGAGGTTTCTGAGGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591986.1
CDS CCA 72 bp GATACACTGCCATCTCCACATTACCGAAAGGGAATCTaGGCCTCAGAGAGGACAAGTCAGTTGCCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: DTLPSPHYRKGI*ASERTSQLPKA
Trigger: GGCTTTGGGCAACTGACTTGTCCTCTCTGAGGCCCAGATTCCCTTTCGGTAATGTGGAGATGGCAGTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587270.5
CDS CAA 72 bp CAGAAACCTCCTTCTATCCTGCTAGACTTTACTCCTTaGAGGCTTCACCCTGGGGAACAGCTGCCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: QKPPSILLDFTP*RLHPGEQLPGR
Trigger: CCTACCTGGCAGCTGTTCCCCAGGGTGAAGCCTCAAAGGAGTAAAGTCTAGCAGGATAGAAGGAGGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591986.1
CDS CAA 72 bp CAGAAACCTCCTTCTATCCTGCTAGACTTTACTCCTTaGAGGCTTCACCCTGGGGAACAGCCCGAAGTAGTT +
Preference number: 6 (lower is better)
Translates to: QKPPSILLDFTP*RLHPGEQPEVV
Trigger: AACTACTTCGGGCTGTTCCCCAGGGTGAAGCCTCAAAGGAGTAAAGTCTAGCAGGATAGAAGGAGGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360957.10
ENST00000418234.6
ENST00000587270.5
CDS TCA 72 bp GACAAGTCAGTTGCCCAAAGCCATGCAGTTGGGACTTaGACTCAGTTCTGGCTGACTCTAGAATCTACTTCT +
Preference number: 6 (lower is better)
Translates to: DKSVAQSHAVGT*TQFWLTLESTS
Trigger: AGAAGTAGATTCTAGAGTCAGCCAGAACTGAGTTCAAGTCCCAACTGCATGGCTTTGGGCAACTGACTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587270.5
CDS TCA 72 bp ACATGCCTACCTTATTGTAATCTCACCACTGCTTTGTaGGGTAGATACACTGCCATCTCCACATTACCGAAA +
Preference number: 6 (lower is better)
Translates to: TCLPYCNLTTAL*GRYTAISTLPK
Trigger: TTTCGGTAATGTGGAGATGGCAGTGTATCTACCTCACAAAGCAGTGGTGAGATTACAATAAGGTAGGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587270.5