RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R12B (Homo sapiens)

Ensembl gene IDs: ENSG00000077157

Ensembl transcript IDs: ENST00000290419.9, ENST00000356764.6, ENST00000391959.5, ENST00000434615.2, ENST00000465284.5, ENST00000466273.6, ENST00000476364.5, ENST00000480184.5, ENST00000491336.5, ENST00000498070.5, ENST00000608999.6, ENST00000618451.1

Found 1522 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACGGTGTCCAGGGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTaGCCCTGCCCGAGCTGGCTTTCTCGGCCTGGGTTCACAGTTCAG +
Preference number: 1 (lower is better)
Translates to: DGVQGFRWGLRRCPC*PCPSWLSRPGFTVQ
Trigger: CTGAACTGTGAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCCCTGGACACCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp GTCCAGGGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTaGCCGAGCTGGCTTTCTCGGCCTGGGTTCACAGTTCAGCTCCAT +
Preference number: 1 (lower is better)
Translates to: VQGFRWGLRRCPCWP*PSWLSRPGFTVQLH
Trigger: ATGGAGCTGAACTGTGAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp ATGGACGGTGTCCAGGGCTTCCGGTGGGGTCTCAGGAGATGCCCATaGTGGCCCTGCCCGAGCTGGCTTTCTCGGCCTGGGTTCACAGTT +
Preference number: 1 (lower is better)
Translates to: MDGVQGFRWGLRRCP*WPCPSWLSRPGFTV
Trigger: AACTGTGAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCCCTGGACACCGTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp ATGAGAATGGACGGTGTCCAGGGCTTCCGGTGGGGTCTCAGGAGATaGCCATGCTGGCCCTGCCCGAGCTGGCTTTCTCGGCCTGGGTTC +
Preference number: 1 (lower is better)
Translates to: MRMDGVQGFRWGLRR*PCWPCPSWLSRPGF
Trigger: GAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCCCTGGACACCGTCCATTCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CCTCAGTCCCGTGTCATGAGAATGGACGGTGTCCAGGGCTTCCGGTaGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTT +
Preference number: 1 (lower is better)
Translates to: PQSRVMRMDGVQGFR*GLRRCPCWPCPSWL
Trigger: AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCCCTGGACACCGTCCATTCTCATGACACGGGACTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTTCTCGGCCTaGGTTCACAGTTCAGCTCCATCTCTACGCTGGGCGAGGAGCAGA +
Preference number: 1 (lower is better)
Translates to: QEMPMLALPELAFSA*VHSSAPSLRWARSR
Trigger: TCTGCTCCTCGCCCAGCGTAGAGATGGAGCTGAACTGTGAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp TTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTaGCTTTCTCGGCCTGGGTTCACAGTTCAGCTCCATCTCTACGCT +
Preference number: 1 (lower is better)
Translates to: FRWGLRRCPCWPCPS*LSRPGFTVQLHLYA
Trigger: AGCGTAGAGATGGAGCTGAACTGTGAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp GGCTCACCTGTTGTCACTCCCTCCTGCTCCCTCAGTCCCGTGTCATaGGAATGGACGGTGTCCAGGGCTTCCGGTGGGGTCTCAGGAGAT +
Preference number: 1 (lower is better)
Translates to: GSPVVTPSCSLSPVS*EWTVSRASGGVSGD
Trigger: ATCTCCTGAGACCCCACCGGAAGCCCTGGACACCGTCCATTCTCATGACACGGGACTGAGGGAGCAGGAGGGAGTGACAACAGGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp CAGGGCGCATTCGAGGAGGCCAGAGGTGGCGAGGCAGGCTTGCCCTaGACAAACCACAACAGAAGTTGCACACAGAAGTCCCAGGGACCT +
Preference number: 1 (lower is better)
Translates to: QGAFEEARGGEAGLP*TNHNRSCTQKSQGP
Trigger: AGGTCCCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCTGGCCTCCTCGAATGCGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp TCAGGCAGGGCGCATTCGAGGAGGCCAGAGGTGGCGAGGCAGGCTTaGCCTGCACAAACCACAACAGAAGTTGCACACAGAAGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: SGRAHSRRPEVARQA*PAQTTTEVAHRSPR
Trigger: CCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCTGGCCTCCTCGAATGCGCCCTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp GAACGGGAAGGGAATCAGGCAGGGCGCATTCGAGGAGGCCAGAGGTaGCGAGGCAGGCTTGCCCTGCACAAACCACAACAGAAGTTGCAC +
Preference number: 1 (lower is better)
Translates to: EREGNQAGRIRGGQR*RGRLALHKPQQKLH
Trigger: GTGCAACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCTGGCCTCCTCGAATGCGCCCTGCCTGATTCCCTTCCCGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp AGACCAGATTGGCACTCTGGTGGGTGCTGGGGCCCACACATCTCCTaGGAACACATGCCAGGCTGTGGAACTGTGGGGAGTGTGGTGGTG +
Preference number: 1 (lower is better)
Translates to: RPDWHSGGCWGPHIS*EHMPGCGTVGSVVV
Trigger: CACCACCACACTCCCCACAGTTCCACAGCCTGGCATGTGTTCTCAGGAGATGTGTGGGCCCCAGCACCCACCAGAGTGCCAATCTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CTCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATaGTTCTGGATACCTTTCCTGGGGTCCCTGTGGAGGCAACCAGGA +
Preference number: 1 (lower is better)
Translates to: LHLYAGRGADSSGTP*FWIPFLGSLWRQPG
Trigger: TCCTGGTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp CCCCATGGGCACCTGAGGGCAGTACTGCATGGGAAGAGCCCAGGATaGCTCAGGCCTGGCAACTGTGACAAGTATGAGGAAGGAGAGAGA +
Preference number: 1 (lower is better)
Translates to: PHGHLRAVLHGKSPG*LRPGNCDKYEEGER
Trigger: TCTCTCTCCTTCCTCATACTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGCCCTCAGGTGCCCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp TACCAGAGACCCTTCTCAGTGGCCATGACTCACTGTGGCTGTCCCTaGGGAAGGGGCCTCTATGTGGACAGGAGTTGTAGGAGGCTGGTG +
Preference number: 1 (lower is better)
Translates to: YQRPFSVAMTHCGCP*GRGLYVDRSCRRLV
Trigger: CACCAGCCTCCTACAACTCCTGTCCACATAGAGGCCCCTTCCCCAGGGACAGCCACAGTGAGTCATGGCCACTGAGAAGGGTCTCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CACAGTTCAGCTCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTaGGACTCCATGGTTCTGGATACCTTTCCTGGGGTCCCTGTGGAG +
Preference number: 1 (lower is better)
Translates to: HSSAPSLRWARSRQQ*DSMVLDTFPGVPVE
Trigger: CTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGAGCTGAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CTGGCTTTCTCGGCCTGGGTTCACAGTTCAGCTCCATCTCTACGCTaGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATACC +
Preference number: 1 (lower is better)
Translates to: LAFSAWVHSSAPSLR*ARSRQQWDSMVLDT
Trigger: GGTATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGAGCTGAACTGTGAACCCAGGCCGAGAAAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp TTTTATAATCTCTGTTGCTGTCTTCTTCTACACGGCTGGTCAGGGTaGCTAGGCGGGCCTCCCGGGCCTCCCGACGGGCTCTTGCTGAAG +
Preference number: 1 (lower is better)
Translates to: FYNLCCCLLLHGWSG*LGGPPGPPDGLLLK
Trigger: CTTCAGCAAGAGCCCGTCGGGAGGCCCGGGAGGCCCGCCTAGCCACCCTGACCAGCCGTGTAGAAGAAGACAGCAACAGAGATTATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466273.6
3UTR TCA 90 bp CAGCTTGAGCTGCCTGGGGTGCTCATGAGTCTCCAAACCAGCAGGTaGGGACTGAGGATTGTGGCCACTGAAGAGGCCAGCAGTAGGTAC +
Preference number: 1 (lower is better)
Translates to: QLELPGVLMSLQTSR*GLRIVATEEASSRY
Trigger: GTACCTACTGCTGGCCTCTTCAGTGGCCACAATCCTCAGTCCTCACCTGCTGGTTTGGAGACTCATGAGCACCCCAGGCAGCTCAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp GAGGGGACCATTTCAGAGCAGGCTGGAATCAGGTGCTTGGACCAGTaGAGACATGTCTTGCTTCCTCCAGCTCTCTCTGGGGCCCTCCCA +
Preference number: 1 (lower is better)
Translates to: EGTISEQAGIRCLDQ*RHVLLPPALSGALP
Trigger: TGGGAGGGCCCCAGAGAGAGCTGGAGGAAGCAAGACATGTCTTCACTGGTCCAAGCACCTGATTCCAGCCTGCTCTGAAATGGTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp CTGTTTGCTGCACATCTGCCTGCAGAGCCAAACCTCAGGGCCCGGTaGAGTGTCCAGCCTGGTATCTGGCATCCCAGTAGCTTCCATGTT +
Preference number: 1 (lower is better)
Translates to: LFAAHLPAEPNLRAR*SVQPGIWHPSSFHV
Trigger: AACATGGAAGCTACTGGGATGCCAGATACCAGGCTGGACACTGCACCGGGCCCTGAGGTTTGGCTCTGCAGGCAGATGTGCAGCAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp AGCAGTGGGACTCCATGGTTCTGGATACCTTTCCTGGGGTCCCTGTaGAGGCAACCAGGATTTTCAGGAGCAGCCAGTCAGCAGCTCAGC +
Preference number: 1 (lower is better)
Translates to: SSGTPWFWIPFLGSL*RQPGFSGAASQQLS
Trigger: GCTGAGCTGCTGACTGGCTGCTCCTGAAAATCCTGGTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp GAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATACCTTTCCTaGGGTCCCTGTGGAGGCAACCAGGATTTTCAGGAGCAGCCAGTC +
Preference number: 1 (lower is better)
Translates to: EEQTAVGLHGSGYLS*GPCGGNQDFQEQPV
Trigger: GACTGGCTGCTCCTGAAAATCCTGGTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTaGATACCTTTCCTGGGGTCCCTGTGGAGGCAACCAGGATTTTCA +
Preference number: 1 (lower is better)
Translates to: LYAGRGADSSGTPWF*IPFLGSLWRQPGFS
Trigger: TGAAAATCCTGGTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp GCAGAGCCAAACCTCAGGGCCCGGTGCAGTGTCCAGCCTGGTATCTaGCATCCCAGTAGCTTCCATGTTCTGTGTATGTGTGTGGTGTGC +
Preference number: 1 (lower is better)
Translates to: AEPNLRARCSVQPGI*HPSSFHVLCMCVVC
Trigger: GCACACCACACACATACACAGAACATGGAAGCTACTGGGATGCCAGATACCAGGCTGGACACTGCACCGGGCCCTGAGGTTTGGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp TGGGGTCAGACCTGGCCACCCACGTACAAACCCTGCCAGCGGGCCTaGACAGCTCTTCTCTGGGCATGGCTCCTTCATTTTGAGTTTAGA +
Preference number: 1 (lower is better)
Translates to: WGQTWPPTYKPCQRA*TALLWAWLLHFEFR
Trigger: TCTAAACTCAAAATGAAGGAGCCATGCCCAGAGAAGAGCTGTTCAGGCCCGCTGGCAGGGTTTGTACGTGGGTGGCCAGGTCTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp AGGGTCAGTATGGTGGGTGAGGGTGGTGAGATGGTCCTGAGGCTCTaGCTTCTAACCCAGAATCTCCCTTCAGGGAAGCACCAAAAGGGG +
Preference number: 1 (lower is better)
Translates to: RVSMVGEGGEMVLRL*LLTQNLPSGKHQKG
Trigger: CCCCTTTTGGTGCTTCCCTGAAGGGAGATTCTGGGTTAGAAGCCAGAGCCTCAGGACCATCTCACCACCCTCACCCACCATACTGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp ACAGAAGTTGCACACAGAAGTCCCAGGGACCTTTGTGCTGGGAACTaGAAGAGTGGGGAAGGTGGAGGGGACCATTTCAGAGCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: TEVAHRSPRDLCAGN*KSGEGGGDHFRAGW
Trigger: CCAGCCTGCTCTGAAATGGTCCCCTCCACCTTCCCCACTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTTCTGTGTGCAACTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp AGAGGTGGCGAGGCAGGCTTGCCCTGCACAAACCACAACAGAAGTTaGACACAGAAGTCCCAGGGACCTTTGTGCTGGGAACTGAAAGAG +
Preference number: 1 (lower is better)
Translates to: RGGEAGLPCTNHNRS*TQKSQGPLCWELKE
Trigger: CTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp AGTCCTGCCATGATGTACAGATGCAGTAGTGTTTGCACTGATTGGTaGAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGAGGT +
Preference number: 1 (lower is better)
Translates to: SPAMMYRCSSVCTDW*RARRGRLPLAAPRG
Trigger: ACCTCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAACACTACTGCATCTGTACATCATGGCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
3UTR CCA 90 bp AGGAGTCCTGCCATGATGTACAGATGCAGTAGTGTTTGCACTGATTaGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGA +
Preference number: 1 (lower is better)
Translates to: RSPAMMYRCSSVCTD*CRARRGRLPLAAPR
Trigger: TCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAACACTACTGCATCTGTACATCATGGCAGGACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
3UTR GCA 90 bp TTTACACCAGCACCTGTCCTCCAGGAACACCGTTGGCTAGATGTGTaGTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGC +
Preference number: 1 (lower is better)
Translates to: FTPAPVLQEHRWLDV*LSIRSKGMGAVNAS
Trigger: GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAGCCAACGGTGTTCCTGGAGGACAGGTGCTGGTGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp GGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTaGTTGGCAATGCTCTCCATCTCCCTTATGTGGACTCTTGTTCTT +
Preference number: 1 (lower is better)
Translates to: GHMYSPCPRPSHSHF*LAMLSISLMWTLVL
Trigger: AAGAACAAGAGTCCACATAAGGGAGATGGAGAGCATTGCCAAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp TCTCCCGAAGGAGGGCTTCCGGGACACTGGGTTGTAAGCCAAACCTaGGTTCTATGTTTGCCCTCAACCCCAACTCTCAAAGGAGAAGTG +
Preference number: 1 (lower is better)
Translates to: SPEGGLPGHWVVSQT*VLCLPSTPTLKGEV
Trigger: CACTTCTCCTTTGAGAGTTGGGGTTGAGGGCAAACATAGAACCCAGGTTTGGCTTACAACCCAGTGTCCCGGAAGCCCTCCTTCGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CCACCTCTTACTTACAGTTCTCCCGAAGGAGGGCTTCCGGGACACTaGGTTGTAAGCCAAACCTGGGTTCTATGTTTGCCCTCAACCCCA +
Preference number: 1 (lower is better)
Translates to: PPLTYSSPEGGLPGH*VVSQTWVLCLPSTP
Trigger: TGGGGTTGAGGGCAAACATAGAACCCAGGTTTGGCTTACAACCCAGTGTCCCGGAAGCCCTCCTTCGGGAGAACTGTAAGTAAGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp GGACAGGCAAAGGCACAGATATTTAGGCGAGAGTCAAGCTACTTCTaGCCCTTGCATGTCCCTTATTCAGGAATAGTGGGCCCCGACGAC +
Preference number: 1 (lower is better)
Translates to: GQAKAQIFRRESSYF*PLHVPYSGIVGPDD
Trigger: GTCGTCGGGGCCCACTATTCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGCTTGACTCTCGCCTAAATATCTGTGCCTTTGCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp GACATCAAGTGTGCTTGTTCTGCTGCTGCTTGGGTTACAAACAGCTaGGTGACATCAGGGGAGAAGAATCTTCCCTCCCTGACCTCTCCC +
Preference number: 1 (lower is better)
Translates to: DIKCACSAAAWVTNS*VTSGEKNLPSLTSP
Trigger: GGGAGAGGTCAGGGAGGGAAGATTCTTCTCCCCTGATGTCACCCAGCTGTTTGTAACCCAAGCAGCAGCAGAACAAGCACACTTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp GGATTTGTGAGGAGTCCTGCCATGATGTACAGATGCAGTAGTGTTTaGACTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCT +
Preference number: 1 (lower is better)
Translates to: GFVRSPAMMYRCSSV*TDWCRARRGRLPLA
Trigger: AGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAACACTACTGCATCTGTACATCATGGCAGGACTCCTCACAAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434615.2
3UTR TCA 90 bp CCTGGGTTCTATGTTTGCCCTCAACCCCAACTCTCAAAGGAGAAGTaGATGCATCTTTCACCATGCAGCTGCTGGCTGCTGGCCAAGATT +
Preference number: 1 (lower is better)
Translates to: PGFYVCPQPQLSKEK*MHLSPCSCWLLAKI
Trigger: AATCTTGGCCAGCAGCCAGCAGCTGCATGGTGAAAGATGCATTCACTTCTCCTTTGAGAGTTGGGGTTGAGGGCAAACATAGAACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp CTTCTCCAAGAAGGATGCAAGGGTGAAACATTCTTTCCTTCCTTCTaGAGGGAAATCATTGCCCTGGTGTGCCAGCCAGTGGTAGGCACA +
Preference number: 1 (lower is better)
Translates to: LLQEGCKGETFFPSF*REIIALVCQPVVGT
Trigger: TGTGCCTACCACTGGCTGGCACACCAGGGCAATGATTTCCCTGCAGAAGGAAGGAAAGAATGTTTCACCCTTGCATCCTTCTTGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTaGTGTTTCTCTTGGCACCCCAATCAGGATCCTGGAGTGGCTACC +
Preference number: 1 (lower is better)
Translates to: DANHSRGHLMINSTS*CFSWHPNQDPGVAT
Trigger: GGTAGCCACTCCAGGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR GCA 90 bp TGGGCGAGGCCCCCACCAATGATAAGATGTAAAATCAGAAGAGGCTaGCCCAGATGTGAGATTCTAGAAATCCCATGCTCTGAACTGTGG +
Preference number: 1 (lower is better)
Translates to: WARPPPMIRCKIRRG*PRCEILEIPCSELW
Trigger: CCACAGTTCAGAGCATGGGATTTCTAGAATCTCACATCTGGGGCAGCCTCTTCTGATTTTACATCTTATCATTGGTGGGGGCCTCGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CAACATCCTGCTGTTTCTCTTGGCACCCCAATCAGGATCCTGGAGTaGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATG +
Preference number: 1 (lower is better)
Translates to: QHPAVSLGTPIRILE*LPQDSPISEDTGLM
Trigger: CATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCACTCCAGGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR TCA 90 bp ATCACTTTGAAGGGGGAAGATAAGTGGGAGACGAAAACAATGAGCTaGCACTTATGCCATAGTCTACCTTCCAGGGAGCAGGCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: ITLKGEDKWETKTMS*HLCHSLPSREQAVV
Trigger: CACCACTGCCTGCTCCCTGGAAGGTAGACTATGGCATAAGTGTCAGCTCATTGTTTTCGTCTCCCACTTATCTTCCCCCTTCAAAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp CTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTTGTaGAAGCCAAGTGCTGTTCTATGCAATATGGTTGTGTGGACTCTG +
Preference number: 1 (lower is better)
Translates to: LCPFTPITPGPVGGL*KPSAVLCNMVVWTL
Trigger: CAGAGTCCACACAACCATATTGCATAGAACAGCACTTGGCTTTCACAAGCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp AGACGGACTGGGATTTATCACCTGAGGGTCTCCTGGCTAAGAATATaGGCTTTTTACTCTGCCAATAGGTTGTGGCCTTCTCCTTTCCCC +
Preference number: 1 (lower is better)
Translates to: RRTGIYHLRVSWLRI*AFYSANRLWPSPFP
Trigger: GGGGAAAGGAGAAGGCCACAACCTATTGGCAGAGTAAAAAGCTCATATTCTTAGCCAGGAGACCCTCAGGTGATAAATCCCAGTCCGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp TCCCTTATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTaGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGAT +
Preference number: 1 (lower is better)
Translates to: SLIGSLELATSLSML*LPVFLSPNLHEEGD
Trigger: ATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTATAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR CCA 90 bp TTGGTAAGTGTGTGCTTAAAGTGCGGTCAGTGCTGGCATAAACAATaGGGTTTGAGGGCCCCTGATGATATCTCTGAGGGAAGGATACCA +
Preference number: 1 (lower is better)
Translates to: LVSVCLKCGQCWHKQ*GLRAPDDISEGRIP
Trigger: TGGTATCCTTCCCTCAGAGATATCATCAGGGGCCCTCAAACCCCATTGTTTATGCCAGCACTGACCGCACTTTAAGCACACACTTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp CTGGTATCTGGCATCCCAGTAGCTTCCATGTTCTGTGTATGTGTGTaGTGTGCCCCTTCCTCCCACTGTTTGAATTCACTGAAAAGCCAT +
Preference number: 1 (lower is better)
Translates to: LVSGIPVASMFCVCV*CAPSSHCLNSLKSH
Trigger: ATGGCTTTTCAGTGAATTCAAACAGTGGGAGGAAGGGGCACACCACACACATACACAGAACATGGAAGCTACTGGGATGCCAGATACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp TCCTCAAAGCTGCCTGCTTATTGGGTTGGAAGAACTCACATCTTATaGAGGGTTAGACCCTGCCTTGAAAATCAGTATGGTAGGCTGGGC +
Preference number: 1 (lower is better)
Translates to: SSKLPAYWVGRTHIL*RVRPCLENQYGRLG
Trigger: GCCCAGCCTACCATACTGATTTTCAAGGCAGGGTCTAACCCTTCATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTTTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp TCTAGGAACCCTTTGCATCGGTCATGCTTCTTTGCCTCTGTTTTGTaGCCCAGGACAGGACTGAATTCTTCAACCATGACATCAAGTGTG +
Preference number: 1 (lower is better)
Translates to: SRNPLHRSCFFASVL*PRTGLNSSTMTSSV
Trigger: CACACTTGATGTCATGGTTGAAGAATTCAGTCCTGTCCTGGGGCACAAAACAGAGGCAAAGAAGCATGACCGATGCAAAGGGTTCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp CAGACCTTACTACAACCAGTGGGGGTCAGAAAGAGAAATGACATTTaGAGTCTAGGAACCCTTTGCATCGGTCATGCTTCTTTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: QTLLQPVGVRKRNDI*SLGTLCIGHASLPL
Trigger: CAGAGGCAAAGAAGCATGACCGATGCAAAGGGTTCCTAGACTGCAAATGTCATTTCTCTTTCTGACCCCCACTGGTTGTAGTAAGGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp GAATTCTTCAACCATGACATCAAGTGTGCTTGTTCTGCTGCTGCTTaGGTTACAAACAGCTGGGTGACATCAGGGGAGAAGAATCTTCCC +
Preference number: 1 (lower is better)
Translates to: EFFNHDIKCACSAAA*VTNSWVTSGEKNLP
Trigger: GGGAAGATTCTTCTCCCCTGATGTCACCCAGCTGTTTGTAACCCAAGCAGCAGCAGAACAAGCACACTTGATGTCATGGTTGAAGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp AGCCCAAAGCATGTCTATTCTTTAGATTCTTTAGAGGCAACACCCTaGGATTTGCATAACCCTTTCGCTAGAGATTGGGATGGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SPKHVYSLDSLEATP*DLHNPFARDWDGAG
Trigger: CCCAGCCCCATCCCAATCTCTAGCGAAAGGGTTATGCAAATCTCAGGGTGTTGCCTCTAAAGAATCTAAAGAATAGACATGCTTTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp CACAGCCCAGTAGGCTGCTATCTTCCATCTTCTTTGTCACAATGTTaGAAGTGGCCTCAGATACTTGACTTTCGCCATATGTGTCTTTCC +
Preference number: 1 (lower is better)
Translates to: HSPVGCYLPSSLSQC*KWPQILDFRHMCLS
Trigger: GGAAAGACACATATGGCGAAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGACAAAGAAGATGGAAGATAGCAGCCTACTGGGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp AGAGAACCTCCTAGCAGAAGAGGCAGAGAAGGTATTTTGAGCTGGTaGTGGTATCTGCTCTGTGATACTACTCTTGCTTTCAGAGTTGGA +
Preference number: 1 (lower is better)
Translates to: REPPSRRGREGILSW*WYLLCDTTLAFRVG
Trigger: TCCAACTCTGAAAGCAAGAGTAGTATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCTAGGAGGTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR CCA 90 bp GAACCTCCTAGCAGAAGAGGCAGAGAAGGTATTTTGAGCTGGTGCTaGTATCTGCTCTGTGATACTACTCTTGCTTTCAGAGTTGGAATG +
Preference number: 1 (lower is better)
Translates to: EPPSRRGREGILSWC*YLLCDTTLAFRVGM
Trigger: CATTCCAACTCTGAAAGCAAGAGTAGTATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCTAGGAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR TCA 90 bp CTCTTTGAATGGGCTGAGCTGTTGCCACCAGATGCACTGATACACTaGTTGATTAGGTTTGTGCTGGGAAGACACACTTCTGTTTTAAGC +
Preference number: 1 (lower is better)
Translates to: LFEWAELLPPDALIH*LIRFVLGRHTSVLS
Trigger: GCTTAAAACAGAAGTGTGTCTTCCCAGCACAAACCTAATCAATCAGTGTATCAGTGCATCTGGTGGCAACAGCTCAGCCCATTCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp GTATCTGCAGACCTTACTACAACCAGTGGGGGTCAGAAAGAGAAATaGCATTTGCAGTCTAGGAACCCTTTGCATCGGTCATGCTTCTTT +
Preference number: 1 (lower is better)
Translates to: VSADLTTTSGGQKEK*HLQSRNPLHRSCFF
Trigger: AAAGAAGCATGACCGATGCAAAGGGTTCCTAGACTGCAAATGTCATTTCTCTTTCTGACCCCCACTGGTTGTAGTAAGGTCTGCAGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp TGTGAAAGCCAAGTGCTGTTCTATGCAATATGGTTGTGTGGACTCTaGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCT +
Preference number: 1 (lower is better)
Translates to: CESQVLFYAIWLCGL*VCKHCFGSLLFRPA
Trigger: AGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAGTCCACACAACCATATTGCATAGAACAGCACTTGGCTTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp GGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTaGAGGAAAGACCATCTTGAATGGTATCAGAACCTCCTACTTCTG +
Preference number: 1 (lower is better)
Translates to: GFVNTALVVSSSDLL*RKDHLEWYQNLLLL
Trigger: CAGAAGTAGGAGGTTCTGATACCATTCAAGATGGTCTTTCCTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp TATCTTACGGTTCTTTTGAACGCCAATCTAGGCTTCTCCTTGGCCTaGCTCCATTTAGGAAATTCCTTGATACTACCAGAGACCCTTCTC +
Preference number: 1 (lower is better)
Translates to: YLTVLLNANLGFSLA*LHLGNSLILPETLL
Trigger: GAGAAGGGTCTCTGGTAGTATCAAGGAATTTCCTAAATGGAGTCAGGCCAAGGAGAAGCCTAGATTGGCGTTCAAAAGAACCGTAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp ACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATaGAGAAGGAGATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAG +
Preference number: 1 (lower is better)
Translates to: TQHVVAASFSQSQSP*RRRFIFGLFWLVKK
Trigger: CTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR CCA 90 bp GGACTGAAGTTAATCCATACAACTCAGCTGAAAAACAGTTACATCTaGTGTGTGAACCTTGGTGGAACTAGGGTGAAGGGTGGAGTAAAG +
Preference number: 1 (lower is better)
Translates to: GLKLIHTTQLKNSYI*CVNLGGTRVKGGVK
Trigger: CTTTACTCCACCCTTCACCCTAGTTCCACCAAGGTTCACACACCAGATGTAACTGTTTTTCAGCTGAGTTGTATGGATTAACTTCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp ACTGGAAATAATCAAATTCACCACTATTCTCACAGCCCAGTAGGCTaGTATCTTCCATCTTCTTTGTCACAATGTTGCAAGTGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: TGNNQIHHYSHSPVG*YLPSSLSQCCKWPQ
Trigger: CTGAGGCCACTTGCAACATTGTGACAAAGAAGATGGAAGATAGCAGCCTACTGGGCTGTGAGAATAGTGGTGAATTTGATTATTTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp AATGCCTCTAGTGGAGAAACAGTCAGTAGTTTACACACACTTTCGTaGGATCCACAGACCATTAACTTGAGTTTTAGCTTCCTTGCTTCC +
Preference number: 1 (lower is better)
Translates to: NASSGETVSSLHTLS*DPQTINLSFSFLAS
Trigger: GGAAGCAAGGAAGCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACTGACTGTTTCTCCACTAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp TCAGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTaGGTTTTAGCTTCCTTGCTTCCTGAGTGGAACCATCTAATAAGC +
Preference number: 1 (lower is better)
Translates to: SVVYTHFRGIHRPLT*VLASLLPEWNHLIS
Trigger: GCTTATTAGATGGTTCCACTCAGGAAGCAAGGAAGCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp CTATTTTCCAATCTAATCAGAACACAAAAGATCAATAGCTGTCCCTaGCAGGGTCTACTGCTTCCTGAGCAGTGTCAATACCCATTAAGG +
Preference number: 1 (lower is better)
Translates to: LFSNLIRTQKINSCP*QGLLLPEQCQYPLR
Trigger: CCTTAATGGGTATTGACACTGCTCAGGAAGCAGTAGACCCTGTCAGGGACAGCTATTGATCTTTTGTGTTCTGATTAGATTGGAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp GCAGCAGGTCTATTTCCTATTAAAACAACTTGTCCAAAGGCTGCCTaGAACAAATTGCTTTCTATCCATTTCTCCATGAGCTCCAATTTC +
Preference number: 1 (lower is better)
Translates to: AAGLFPIKTTCPKAA*NKLLSIHFSMSSNF
Trigger: GAAATTGGAGCTCATGGAGAAATGGATAGAAAGCAATTTGTTGCAGGCAGCCTTTGGACAAGTTGTTTTAATAGGAAATAGACCTGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp AGGCCTATAATTACCATCTCATGGGGCTTCCAGACAATACAGTTGTaGAGGAATGGTATTTTATCTCTGGAGATAGACCAGAAATCAGTT +
Preference number: 1 (lower is better)
Translates to: RPIITISWGFQTIQL*RNGILSLEIDQKSV
Trigger: AACTGATTTCTGGTCTATCTCCAGAGATAAAATACCATTCCTTCACAACTGTATTGTCTGGAAGCCCCATGAGATGGTAATTATAGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 90 bp TTGGCAATGCTCTCCATCTCCCTTATGTGGACTCTTGTTCTTGTCTaGTCTCTTGTCAAATTGTTATTTTGTAATGAACTGCGTCTCCTT +
Preference number: 1 (lower is better)
Translates to: LAMLSISLMWTLVLV*SLVKLLFCNELRLL
Trigger: AAGGAGACGCAGTTCATTACAAAATAACAATTTGACAAGAGATCAGACAAGAACAAGAGTCCACATAAGGGAGATGGAGAGCATTGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 90 bp CTTCTAGGGTCTTATCTTTTAATGTTGCCTTTTTGTCCTCAAAGCTaGCTGCTTATTGGGTTGGAAGAACTCACATCTTATGAAGGGTTA +
Preference number: 1 (lower is better)
Translates to: LLGSYLLMLPFCPQS*LLIGLEELTSYEGL
Trigger: TAACCCTTCATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTTTGAGGACAAAAAGGCAACATTAAAAGATAAGACCCTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 90 bp GTGAAGAGCCAATGTAGATCCCATTTTAAGAAAGCTGAGGAAAGGTaGTTGAGGAAACCTATGAAGCAGCAGGTCTATTTCCTATTAAAA +
Preference number: 1 (lower is better)
Translates to: VKSQCRSHFKKAEER*LRKPMKQQVYFLLK
Trigger: TTTTAATAGGAAATAGACCTGCTGCTTCATAGGTTTCCTCAACCACCTTTCCTCAGCTTTCTTAAAATGGGATCTACATTGGCTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGTGGGCCCCGACGACTaGCACTCCGACTCTCAACTC +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLVGPDD*HSDSQL
Trigger: GAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCAC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGGTGAATACAGGGGCTaGCGCTCTTCCCTCGTGCAT +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLGEYRG*RSSLVH
Trigger: ATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGTGATGGGAGCAGTGTaGATGGGGCACCAGGAGTTC +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLVMGAV*MGHQEF
Trigger: GAACTCCTGGTGCCCCATGCACACTGCTCCCATCAC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTTTGCACCTTTGGAGGTaGAAAGCCGCCTGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLLHLWR*KAAWKL
Trigger: CAGCTTCCAGGCGGCTTTGCACCTCCAAAGGTGCAA...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTCTGCAGGGAAATCATTaGCCTGGTGTGCCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLLQGNH*PGVPAS
Trigger: ACTGGCTGGCACACCAGGGCAATGATTTCCCTGCAG...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGGCCCCATGGGCACCTaGGGGCAGTACTGCATGGGA +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGGPMGT*GQYCMG
Trigger: TCCCATGCAGTACTGCCCTCAGGTGCCCATGGGGCC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGGTATTCTGGATTGCTaGCTCCTCTCAGAACCCTCT +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLGILDC*LLSEPS
Trigger: AGAGGGTTCTGAGAGGAGGCAGCAATCCAGAATACC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp ATCAGGCAGGGCGCATTCGAGGAGGCCAGAGGTGGCGAGGCAGGCTaGCCCTGCACAAACCACAACAGAAGTTGCACACAGAAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: IRQGAFEEARGGEAG*PCTNHNRSCTQKSQ
Trigger: CTGGGACTTCTGTGTGCAACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCTGGCCTCCTCGAATGCGCCCTGCCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCCACCAGAGGCTACCTaGCCATGCCCATGGGTGAAA +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDPPEAT*PCPWVK
Trigger: TTTCACCCATGGGCATGGTCAGGTAGCCTCTGGTGG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCCAGCAGGTGAGGACTaGGGATTGTGGCCACTGAAG +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDPAGED*GLWPLK
Trigger: CTTCAGTGGCCACAATCCTCAGTCCTCACCTGCTGG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACTCACCCAGGCTGGAGTaGAGTGGCGTGATCAAGGCT +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDSPRLE*SGVIKA
Trigger: AGCCTTGATCACGCCACTGCACTCCAGCCTGGGTGA...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTCGTTGGCTAGATGTGTaGTTGTCCATCAGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLRWLDV*LSIRSK
Trigger: TTTGGACCTGATGGACAAGCACACATCTAGCCAACG...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GTGGCTAGGCGGGCCTCCCGGGCCTCCCGACGGGCTCTTGCTGAAGCCCGGTCACTAGAAAGTCTTTCATaGTATGTCAAGGACAGCAGA +
Preference number: 2 (lower is better)
Translates to: VARRASRASRRALAEARSLESLS*YVKDSR
Trigger: TCTGCTGTCCTTGACATAGCATGAAAGACTTTCTAG...TGACCGGGCTTCAGCAAGAGCCCGTCGGGAGGCCCGGGAGGCCCGCCTAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466273.6
3UTR-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCCAGGGAGCAGGCAGTaGTGCTGCCACCAAGGCACC +
Preference number: 2 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGPGSRQ*CCHQGT
Trigger: GGTGCCTTGGTGGCAGCACCACTGCCTGCTCCCTGG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp AGGAGCCCTGCCTTCGTCTCCATAGGAAGGACACATGTACAGCCCTaGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGGCAATGCTCTC +
Preference number: 2 (lower is better)
Translates to: RSPAFVSIGRTHVQP*PPALSFPLLLGNAL
Trigger: GAGAGCATTGCCAAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCCTATGGAGACGAAGGCAGGGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTGCTCAGCTGGAGCCTaGGGGATGAAGTCACCAGTG +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLCSAGA*GMKSPV
Trigger: CACTGGTGACTTCATCCCTCAGGCTCCAGCTGAGCA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCCTTCTCAGTGGCCATaGCTCACTGTGGCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLPSQWP*LTVAVP
Trigger: AGGGACAGCCACAGTGAGTCATGGCCACTGAGAAGG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACTCTCCCCAAGTCAGTaGCCAGGGATTTCCGCTTGG +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGLSPSQ*PGISAW
Trigger: CCAAGCGGAAATCCCTGGTCACTGACTTGGGGAGAG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGTCATCCTGTTGAACTaGGAGGGACAGGTAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGVILLN*EGQVAP
Trigger: GGGGGCTACCTGTCCCTCTCAGTTCAACAGGATGAC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGTGAAGTGGCAGGGATaGAACACCAATCTAAGAGTT +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLVKWQG*NTNLRV
Trigger: AACTCTTAGATTGGTGTTGCATCCCTGCCACTTCAC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACATGCATCTTTCACCATaGAGCTGCTGGCTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDMHLSP*SCWLLA
Trigger: GGCCAGCAGCCAGCAGCTGCATGGTGAAAGATGCAT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGGCCAGAGGCAGGGCTTaGTGGATGGAGAAACCAGAC +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKARGRA*WMEKPD
Trigger: GTCTGGTTTCTCCATCCAGCAAGCCCTGCCTCTGGC...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTAAGGACTTGATTTGCTaGTTTCTGAAAACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLKDLIC*FLKTLG
Trigger: CCCCAGGGTTTTCAGAAAGCAGCAAATCAAGTCCTT...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGTGATGGGAGCAGTGTaGATGGGGCACCAGGAGTTC +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGVMGAV*MGHQEF
Trigger: GAACTCCTGGTGCCCCATGCACACTGCTCCCATCAC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGAGGGGGCGGTGGTGGTaGTGGTTGGTATACCCAACT +
Preference number: 2 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWERGRWW*WLVYPT
Trigger: AGTTGGGTATACCAACCACCACCACCACCGCCCCCT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGCTGTGGGGAGTGTGGTaGTGCCGGGGAACATTGTCT +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKLWGVW*CRGTLS
Trigger: AGACAATGTTCCCCGGCACCACCACACTCCCCACAG...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAAGATTGGCACTCTGGTaGGTGCTGGGGCCCACACAT +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGRLALW*VLGPTH
Trigger: ATGTGTGGGCCCCAGCACCCACCAGAGTGCCAATCT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTTTCCAGGCCTGGACATaGTATTTTAAAGGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLFQAWT*YFKGWF
Trigger: AAACCAGCCTTTAAAATATCATGTCCAGGCCTGGAA...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCACGTGACGGCTAGGTaGTACTGTATCTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDHVTAR*YCICRP
Trigger: AGGTCTGCAGATACAGTATCACCTAGCCGTCACGTG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTATGTCCAAAGCCCCTaGGCCTTCTGCCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKYVQSP*AFCLLP
Trigger: GGGAAGAAGGCAGAAGGCCCAGGGGCTTTGGACATA...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGTCACCATGCAGCTGCTaGCTGCTGGCCAAGATTCTG +
Preference number: 2 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWESPCSC*LLAKIL
Trigger: CAGAATCTTGGCCAGCAGCCAGCAGCTGCATGGTGA...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTCCTTGGCCAGGCTATaGAGGAGTCATACGGGCCTA +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLSLARL*RSHTGL
Trigger: TAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAAAGAGTGGGGAAGGTaGAGGGGACCATTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDKEWGR*RGPFQS
Trigger: GCTCTGAAATGGTCCCCTCCACCTTCCCCACTCTTT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATGGGAACTGAAAGAGTaGGGAAGGTGGAGGGGACCA +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGWELKE*GRWRGP
Trigger: TGGTCCCCTCCACCTTCCCCACTCTTTCAGTTCCCA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp ACACCAGCACCTGTCCTCCAGGAACACCGTTGGCTAGATGTGTGCTaGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: TPAPVLQEHRWLDVC*SIRSKGMGAVNASR
Trigger: CCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAGCCAACGGTGTTCCTGGAGGACAGGTGCTGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGGTGGGGGCAGCAAATaGTGTCCCTTTCTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLGGGSK*CPFLSS
Trigger: TGAGGAAAGAAAGGGACAGCATTTGCTGCCCCCACC...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTCTCCTGAGAACACATaGCAGGCTGTGGAACTGTGG +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKSPENT*QAVELW
Trigger: CCACAGTTCCACAGCCTGGCATGTGTTCTCAGGAGA...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGGACAGTGTCTGTCTGTaGCTAGGAGAGGCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKDSVCL*LGEAAN
Trigger: GTTTGCAGCCTCTCCTAGCCACAGACAGACACTGTC...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACGCAGCTGCTGGCTGCTaGCCAAGATTCTGTGTTTTT +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDAAAGC*PRFCVF
Trigger: AAAAACACAGAATCTTGGCCAGCAGCCAGCAGCTGC...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAGACATGGCTACTCATaGTCTCCTTGGCCAGGCTAT +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDRHGYS*SPWPGY
Trigger: ATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCATTTCAGAGCAGGCTaGAATCAGGTGCTTGGACCA +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDHFRAG*NQVLGP
Trigger: TGGTCCAAGCACCTGATTCCAGCCTGCTCTGAAATG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CACCTGAGGGAGCATGAGCCCAGATCCTTTAACATCTATCCTGTCTaGCTGCTTCAGTCCCTAAGGCTGGGTAGGGTGAGGGGCATGAGC +
Preference number: 2 (lower is better)
Translates to: HLREHEPRSFNIYPV*LLQSLRLGRVRGMS
Trigger: GCTCATGCCCCTCACCCTACCCAGCCTTAGGGACTGAAGCAGCAAGACAGGATAGATGTTAAAGGATCTGGGCTCATGCTCCCTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CAGAGGTGGCGAGGCAGGCTTGCCCTGCACAAACCACAACAGAAGTaGCACACAGAAGTCCCAGGGACCTTTGTGCTGGGAACTGAAAGA +
Preference number: 2 (lower is better)
Translates to: QRWRGRLALHKPQQK*HTEVPGTFVLGTER
Trigger: TCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTACAGACAGGGAGGGTaGCCTGCCCAAAGTCACATG +
Preference number: 2 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGYRQGG*PAQSHM
Trigger: CATGTGACTTTGGGCAGGTCACCCTCCCTGTCTGTA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGGTTACATCTGGTGTGTaGACCTTGGTGGAACTAGGG +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKVTSGV*TLVELG
Trigger: CCCTAGTTCCACCAAGGTTCACACACCAGATGTAAC...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAAGGTGCTTGGACCAGTaGAGACATGTCTTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGRCLDQ*RHVLLP
Trigger: AGGAAGCAAGACATGTCTTCACTGGTCCAAGCACCT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATGCCCACCTCAAGGGTaGCGACACTCACCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGCPPQG*RHSPVA
Trigger: GGCCACTGGTGAGTGTCGGCACCCTTGAGGTGGGCA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACGGATACCAGGGCTCCTaGAGTGTTACTTCACTGATA +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDGYQGS*SVTSLI
Trigger: TATCAGTGAAGTAACACTGCAGGAGCCCTGGTATCC...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCAAAGCAAGTCTGGCTaGTTCTCCCTAAACAACCCC +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLQSKSG*FSLNNP
Trigger: GGGGTTGTTTAGGGAGAAGCAGCCAGACTTGCTTTG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTGCTGGCATAAACAATaGGGTTTGAGGGCCCCTGAT +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLCWHKQ*GLRAPD
Trigger: ATCAGGGGCCCTCAAACCCCATTGTTTATGCCAGCA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGTGCTAGTGTTCACCTaGATGGCCTCAACACCTTTG +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGVLVFT*MASTPL
Trigger: CAAAGGTGTTGAGGCCATCCAGGTGAACACTAGCAC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGATGGTCCTGAGGCTCTaGCTTCTAACCCAGAATCTC +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKMVLRL*LLTQNL
Trigger: GAGATTCTGGGTTAGAAGCCAGAGCCTCAGGACCAT...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTaGGCAATGCTCTCCATCTCCCTTATGTGGACTCTTGTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: HMYSPCPRPSHSHFC*AMLSISLMWTLVLV
Trigger: GACAAGAACAAGAGTCCACATAAGGGAGATGGAGAGCATTGCCAAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGCATTCCCTGAGAACTaGACTTACAGTACTCCCATG +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGAFPEN*TYSTPM
Trigger: CATGGGAGTACTGTAAGTTCAGTTCTCAGGGAATGC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGGCATTCCCTGAGAACTaGACTTACAGTACTCCCATG +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKAFPEN*TYSTPM
Trigger: CATGGGAGTACTGTAAGTTCAGTTCTCAGGGAATGC...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGGAGAATCTGGTACACTaGGTAAGCCCAAAGCATGTC +
Preference number: 2 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEENLVH*VSPKHV
Trigger: GACATGCTTTGGGCTTACTCAGTGTACCAGATTCTC...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGCAGTCACTGTCACCTTaGATGCTAACCATTCCAGAG +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKQSLSP*MLTIPE
Trigger: CTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTG...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAATGACTTCCCACAATaGCCAAAGACAACTGAGGTC +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDNDFPQ*PKTTEV
Trigger: GACCTCAGTTGTCTTTGGCCATTGTGGGAAGTCATT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAGCCGACACTCACCAGTaGCCTGGACCGAAACACTGG +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGADTHQ*PGPKHW
Trigger: CCAGTGTTTCGGTCCAGGCCACTGGTGAGTGTCGGC...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAAAGTGCGGTCAGTGCTaGCATAAACAATGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGKCGQC*HKQWGL
Trigger: CAAACCCCATTGTTTATGCCAGCACTGACCGCACTT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAGAGTAAACCAGACATaGCTACTCATGGTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDRVNQT*LLMVSL
Trigger: CAAGGAGACCATGAGTAGCCATGTCTGGTTTACTCT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTTTCAGCAGACGGACTaGGATTTATCACCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLFQQTD*DLSPEG
Trigger: ACCCTCAGGTGATAAATCCCAGTCCGTCTGCTGAAA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp GCAAAGGCACAGATATTTAGGCGAGAGTCAAGCTACTTCTGGCCCTaGCATGTCCCTTATTCAGGAATAGTGGGCCCCGACGACTGGCAC +
Preference number: 2 (lower is better)
Translates to: AKAQIFRRESSYFWP*HVPYSGIVGPDDWH
Trigger: GTGCCAGTCGTCGGGGCCCACTATTCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGCTTGACTCTCGCCTAAATATCTGTGCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCATGGCCAAAGACAACTaGGGTCAGGTGCTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASMAKDN*GQVLCP
Trigger: AGGACAGAGCACCTGACCTCAGTTGTCTTTGGCCAT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGACCAGCAGGTGAGGACTaGGGATTGTGGCCACTGAAG +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGPAGED*GLWPLK
Trigger: CTTCAGTGGCCACAATCCTCAGTCCTCACCTGCTGG...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATATGGATATAGCAGATaGCTAAGGGTGATGGCAGGA +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGYGYSR*LRVMAG
Trigger: TCCTGCCATCACCCTTAGTCATCTGCTATATCCATA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCAACACCCTGAGATTTaGATAACCCTTTCGCTAGAG +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLQHPEI*ITLSLE
Trigger: CTCTAGCGAAAGGGTTATGCAAATCTCAGGGTGTTG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGAGTGTGTGCTTAAAGTaGGGTCAGTGCTGGCATAAA +
Preference number: 2 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWESVCLK*GQCWHK
Trigger: TTTATGCCAGCACTGACCGCACTTTAAGCACACACT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTGCGCCTTGGAGAAATaGCTAGGTATGAGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGCALEK*LGMREE
Trigger: TTCCTCCCTCATACCTAGCCATTTCTCCAAGGCGCA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATGTAACCCCTTTCCCTaGTCTATTGAGTGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGCNPFP*SIEWKR
Trigger: CCTTTTCCACTCAATAGACCAGGGAAAGGGGTTACA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGGGGTCATCATACTCTaGAGCTATCTGGAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGGVIIL*SYLEKD
Trigger: ATCCTTTTCCAGATAGCTCCAGAGTATGATGACCCC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATACTGATAAGCTCCAGTaGAACCAGTGGCTCATCTGG +
Preference number: 2 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDTDKLQ*NQWLIW
Trigger: CCAGATGAGCCACTGGTTCCACTGGAGCTTATCAGT...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGAGGTAGAGATGAATTGCGATTaGCTGAAATGTAGGGACTTG +
Preference number: 2 (lower is better)
Translates to: LIGAGQEEAGCHWLPREVEMNCD*LKCRDL
Trigger: CAAGTCCCTACATTTCAGCCAATCGCAATTCATCTC...TACCTCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
3UTR CAA 90 bp TCCACCTGTCTCCTCTCCTTGAGGATAGACCAGCAGCTACCATTTTaGTCAGTTTACACCAGCACCTGTCCTCCAGGAACACCGTTGGCT +
Preference number: 2 (lower is better)
Translates to: STCLLSLRIDQQLPF*SVYTSTCPPGTPLA
Trigger: AGCCAACGGTGTTCCTGGAGGACAGGTGCTGGTGTAAACTGACAAAAATGGTAGCTGCTGGTCTATCCTCAAGGAGAGGAGACAGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp TGCACAAACCACAACAGAAGTTGCACACAGAAGTCCCAGGGACCTTaGTGCTGGGAACTGAAAGAGTGGGGAAGGTGGAGGGGACCATTT +
Preference number: 2 (lower is better)
Translates to: CTNHNRSCTQKSQGP*CWELKEWGRWRGPF
Trigger: AAATGGTCCCCTCCACCTTCCCCACTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTTTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACACACTGGCCTTTCTCTaGGAGGAGACAGTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYTLAFL*EETVSV
Trigger: GACAGACACTGTCTCCTCTCAGAGAAAGGCCAGTGT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCGGGTCTACTGCTTCCTaGGCAGTGTCAATACCCATT +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASGSTAS*AVSIPI
Trigger: AATGGGTATTGACACTGCTCAGGAAGCAGTAGACCC...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTCTTTTCACCCCTGTTaGTCAAGGTCAGGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDSFHPC*SRSGQR
Trigger: TCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCAATAGAGCGCCTCAATaGAGTCACTGTCACCTTGGA +
Preference number: 2 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGNRAPQ*SHCHLG
Trigger: TCCAAGGTGACAGTGACTGCATTGAGGCGCTCTATT...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACTCTTTGTCACAATGTTaGAAGTGGCCTCAGATACTT +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDSLSQC*KWPQIL
Trigger: AAGTATCTGAGGCCACTTGCAACATTGTGACAAAGA...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATTGCACCTTTGGAGGTaGAAAGCCGCCTGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGLHLWR*KAAWKL
Trigger: CAGCTTCCAGGCGGCTTTGCACCTCCAAAGGTGCAA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATTTTGTCCTCAAAGCTaGCTGCTTATTGGGTTGGAA +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGFCPQS*LLIGLE
Trigger: TTCCAACCCAATAAGCAGGCAGCTTTGAGGACAAAA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAAGGAGGGAAAGCCATTaGAACATCATTCAATTACCC +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGRRESH*NIIQLP
Trigger: GGGTAATTGAATGATGTTGCAATGGCTTTCCCTCCT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACCAAGTGCTGTTCTATaGAATATGGTTGTGTGGACT +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGPSAVL*NMVVWT
Trigger: AGTCCACACAACCATATTGCATAGAACAGCACTTGG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAATCATTGCCCTGGTGTaGCAGCCAGTGGTAGGCACA +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGIIALV*QPVVGT
Trigger: TGTGCCTACCACTGGCTGGCACACCAGGGCAATGAT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTTTGCCTCTGTTTTGTaGCCCAGGACAGGACTGAAT +
Preference number: 2 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDFASVL*PRTGLN
Trigger: ATTCAGTCCTGTCCTGGGGCACAAAACAGAGGCAAA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCATCTTTCAGCCTCTaGTTGTCGGATTTCAGTTCT +
Preference number: 2 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFSSFSL*LSDFSS
Trigger: AGAACTGAAATCCGACAACCAGAGGCTGAAAGATGA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290419.9
3UTR-3UTR CCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGCATCTAATAAGCACATaGTTTGGGGAAGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEHLIST*FGEGKW
Trigger: CCATTTCCCTTCCCCAAACCATGTGCTTATTAGATG...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACTCCTTTTTGCACCTTTaGAGGTGCAAAGCCGCCTGG +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYSFLHL*RCKAAW
Trigger: CCAGGCGGCTTTGCACCTCCAAAGGTGCAAAAAGGA...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGAGAAGGGGTGGCCTTaGAATACAGATGTTCTGACT +
Preference number: 2 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGEKGWP*NTDVLT
Trigger: AGTCAGAACATCTGTATTCCAAGGCCACCCCTTCTC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGAAAGCTGAGGAAAGGTaGTTGAGGAAACCTATGAAG +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKKAEER*LRKPMK
Trigger: CTTCATAGGTTTCCTCAACCACCTTTCCTCAGCTTT...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAAATCTCTGCTCAGCTaGAGCCTGAGGGATGAAGTC +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASKSLLS*SLRDEV
Trigger: GACTTCATCCCTCAGGCTCCAGCTGAGCAGAGATTT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAAAAATCTCTGCTCAGCTaGAGCCTGAGGGATGAAGTC +
Preference number: 2 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKKSLLS*SLRDEV
Trigger: GACTTCATCCCTCAGGCTCCAGCTGAGCAGAGATTT...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGTGACCAACAGTTCCTaGACTACAATGAAGTTGATC +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLVTNSS*TTMKLI
Trigger: GATCAACTTCATTGTAGTCCAGGAACTGTTGGTCAC...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGACATGGCTACTCATaGTCTCCTTGGCCAGGCTAT +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASRHGYS*SPWPGY
Trigger: ATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CGGTCCCTTATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTaGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGA +
Preference number: 2 (lower is better)
Translates to: RSLIGSLELATSLSM*WLPVFLSPNLHEEG
Trigger: TCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTATAAGGGACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR CAA 90 bp ACTGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTaGTTGTCCAGTAGAGCAGAAATCCGAGGGCTTGAAGAGGAGCGA +
Preference number: 2 (lower is better)
Translates to: TALEFPHTLPNCTLS*LSSRAEIRGLEEER
Trigger: TCGCTCCTCTTCAAGCCCTCGGATTTCTGCTCTACTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACGTGGAATTGGGATCTTaGATTACAGCTTCTAGTTTA +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDVELGS*ITASSL
Trigger: TAAACTAGAAGCTGTAATTCAAGATCCCAATTCCAC...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACAAAGTACATGGCTTTaGGAGTTTCTTCTTCCATCA +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGQSTWL*EFLLPS
Trigger: TGATGGAAGAAGAAACTCTCAAAGCCATGTACTTTG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTCTGCTATTTGGGTGTaGAGAGCCAATGTAGATCCC +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASSAIWV*RANVDP
Trigger: GGGATCTACATTGGCTCTTCACACCCAAATAGCAGA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGAAATCCCATGCTCTaGACTGTGGAGACAGTCACA +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASRNPML*TVETVT
Trigger: TGTGACTGTCTCCACAGTTCAGAGCATGGGATTTCT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGCTTTTGAGTAATAAATaGATAGCCACCAGAGGCTAC +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKLLSNK*IATRGY
Trigger: GTAGCCTCTGGTGGCTATGCATTTATTACTCAAAAG...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAGTTCTGTTAACACCTaGAGTAGTGGAGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQSSVNT*SSGGGK
Trigger: CTTCCCTCCTCCACTACTCCAGGTGTTAACAGAACT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290419.9
3UTR-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATGGAAGTGAGGCAGAATaGAGTATTCAGAGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDGSEAE*SIQSPN
Trigger: ATTTGGGCTCTGAATACTCCATTCTGCCTCACTTCC...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTCACAATGTTGCAAGTaGCCTCAGATACTTGACTTT +
Preference number: 2 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKSQCCK*PQILDF
Trigger: AAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGA...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGCAGGCTGGAGTGCAGTaGCGTGATCAAGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKQAGVQ*RDQGSL
Trigger: CAGTGAGCCTTGATCACGCCACTGCACTCCAGCCTG...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGCCAGAATCTCTGGAATaGCCAAATCATTACTTCCAA +
Preference number: 2 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEPESLE*PNHYFQ
Trigger: TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGG...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGGGGTCATCATACTCTaGAGCTATCTGGAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGGVIIL*SYLEKD
Trigger: ATCCTTTTCCAGATAGCTCCAGAGTATGATGACCCC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCAGAAAATATCACTCTaGCAGATTCATGGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: PVNTGADALPSCILLQSDQKISL*QIHGPK
Trigger: TTTTGGACCATGAATCTGCCAGAGTGATATTTTCTG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAATCTTGGCTGATTCATaGAAAACCACCTCTCTAAAG +
Preference number: 2 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGILADS*KTTSLK
Trigger: CTTTAGAGAGGTGGTTTTCCATGAATCAGCCAAGAT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp TTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTaGGCACCCCAATCAGGATCCTGGAGTGGCTACCACAAGACTCAC +
Preference number: 2 (lower is better)
Translates to: FQRASDDQFNILLFL*APQSGSWSGYHKTH
Trigger: GTGAGTCTTGTGGTAGCCACTCCAGGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR CAA 90 bp ATTGGGTTGGAAGAACTCACATCTTATGAAGGGTTAGACCCTGCCTaGAAAATCAGTATGGTAGGCTGGGCGTGGGCCCTTACGCCTGTA +
Preference number: 2 (lower is better)
Translates to: IGLEELTSYEGLDPA*KISMVGWAWALTPV
Trigger: TACAGGCGTAAGGGCCCACGCCCAGCCTACCATACTGATTTTCAAGGCAGGGTCTAACCCTTCATAAGATGTGAGTTCTTCCAACCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGAGGTAGATGAACCAATGGTAACTACTTCTACCAAATaGAGCACTTCTCTGCACCAA +
Preference number: 2 (lower is better)
Translates to: QEEAGCHWLPREVDEPMVTTSTK*STSLHQ
Trigger: TTGGTGCAGAGAAGTGCTTCATTTGGTAGAAGTAGT...TACCATTGGTTCATCTACCTCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
3UTR-3UTR TCA 90 bp GGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCACCTGAATTAAAAGTCTaGGGACTTCAGAGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: GHLTQHVVAASFSQSQSPPELKV*GLQSSP
Trigger: AGGGCTACTCTGAAGTCCTCAGACTTTTAATTCAGG...TGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR-3UTR GCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATACAACTGAGGTCAGGTaGTCTGTCCTAGCTTTTATA +
Preference number: 2 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDTTEVR*SVLAFI
Trigger: TATAAAAGCTAGGACAGAGCACCTGACCTCAGTTGT...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGTCCTCAAAGCTGCCTaGTTATTGGGTTGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYVLKAA*LLGWKN
Trigger: GTTCTTCCAACCCAATAAGCAGGCAGCTTTGAGGAC...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCCTTGGGATAGGGGTTTaGAAGAACAGGGCATTGAAA +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASLGIGV*KNRALK
Trigger: TTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAG...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTAACTGTCATAAAACTTaGGATAGGGGTTTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLNCHKT*DRGLEE
Trigger: TTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATCCTGCTGTTTCTCTTaGCACCCCAATCAGGATCCT +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGSCCFS*HPNQDP
Trigger: AGGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCAGAAAATATCACTCTaGCAGATTCATGGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLQKISL*QIHGPK
Trigger: TTTTGGACCATGAATCTGCCAGAGTGATATTTTCTG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTAACCGTATATACTCTTaGTTACTTGAAGCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLNRIYS*LLEAWN
Trigger: GTTCCAAGCTTCAAGTAACCAAGAGTATATACGGTT...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGAGGTAGATGAACCAATGGTAAAATGTAGGGACTTGTaGGGTCACTACTTCTACCAA +
Preference number: 2 (lower is better)
Translates to: QEEAGCHWLPREVDEPMVKCRDL*GHYFYQ
Trigger: TTGGTAGAAGTAGTGACCCCACAAGTCCCTACATTT...TACCATTGGTTCATCTACCTCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434615.2
3UTR-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAACCACTCTAAACACTaGATATCACTGGCAACCCTA +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASNHSKH*ISLATL
Trigger: TAGGGTTGCCAGTGATATTCAGTGTTTAGAGTGGTT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAAAGCCGCCTGGAAGCTaGATAACTGGCAACACTTTT +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGKPPGS*ITGNTF
Trigger: AAAAGTGTTGCCAGTTATTCAGCTTCCAGGCGGCTT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAACCCTCGGCTCCAAGTaGGAAAAGCAAGGAATTAAG +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGTLGSK*EKQGIK
Trigger: CTTAATTCCTTGCTTTTCTCACTTGGAGCCGAGGGT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCGATGCACTGATACACTaGTTGATTAGGTTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASDALIH*LIRFVL
Trigger: CAGCACAAACCTAATCAATCAGTGTATCAGTGCATC...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCGGTGGGGGCAGCAAATaGTGTCCCTTTCTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: VTLDANHSRGHLMINSTSGGGSK*CPFLSS
Trigger: TGAGGAAAGAAAGGGACAGCATTTGCTGCCCCCACC...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACTGTAACCCCTTTCCCTaGTCTATTGAGTGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYCNPFP*SIEWKR
Trigger: CCTTTTCCACTCAATAGACCAGGGAAAGGGGTTACA...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAATCCTTGCTTCCTGAGTaGAACCATCTAATAAGCACA +
Preference number: 2 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKSLLPE*NHLIST
Trigger: TGTGCTTATTAGATGGTTCCACTCAGGAAGCAAGGA...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CAGTCTAGGAACCCTTTGCATCGGTCATGCTTCTTTGCCTCTGTTTaGTGCCCCAGGACAGGACTGAATTCTTCAACCATGACATCAAGT +
Preference number: 2 (lower is better)
Translates to: QSRNPLHRSCFFASV*CPRTGLNSSTMTSS
Trigger: ACTTGATGTCATGGTTGAAGAATTCAGTCCTGTCCTGGGGCACAAAACAGAGGCAAAGAAGCATGACCGATGCAAAGGGTTCCTAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp AGTAAAACTCCTTCTTCGGTTCCCACTTCCACCTGTCTCCTCTCCTaGAGGATAGACCAGCAGCTACCATTTTTGTCAGTTTACACCAGC +
Preference number: 2 (lower is better)
Translates to: SKTPSSVPTSTCLLS*RIDQQLPFLSVYTS
Trigger: GCTGGTGTAAACTGACAAAAATGGTAGCTGCTGGTCTATCCTCAAGGAGAGGAGACAGGTGGAAGTGGGAACCGAAGAAGGAGTTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp AAGGCCAGAAGAGAACCTCCTAGCAGAAGAGGCAGAGAAGGTATTTaGAGCTGGTGCTGGTATCTGCTCTGTGATACTACTCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: KARREPPSRRGREGI*SWCWYLLCDTTLAF
Trigger: GAAAGCAAGAGTAGTATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCTAGGAGGTTCTCTTCTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR CAA 90 bp CCCAATCTCCATGAAGAAGGAGATTCATCTTTGGGCTCTTCTGGCTaGTTAAAAAGGCCAGAAGAGAACCTCCTAGCAGAAGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: PNLHEEGDSSLGSSG*LKRPEENLLAEEAE
Trigger: CTCTGCCTCTTCTGCTAGGAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTCTTCATGGAGATTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR-3UTR TCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACAACCACTCTAAACACTaGATATCACTGGCAACCCTA +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYNHSKH*ISLATL
Trigger: TAGGGTTGCCAGTGATATTCAGTGTTTAGAGTGGTT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCTGCCTGGGGTGCTCATaGGTCTCCAAACCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSCLGCS*VSKPAG
Trigger: ACCTGCTGGTTTGGAGACTCATGAGCACCCCAGGCA...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAAGGAAAATTTTCTTGCTaGTGTAAGGCAGAGTTCAAG +
Preference number: 2 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKGKFSC*CKAEFK
Trigger: CTTGAACTCTGCCTTACAGCAGCAAGAAAATTTTCC...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCAACTGTCATAAAACTTaGGATAGGGGTTTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGNCHKT*DRGLEE
Trigger: TTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCCCAGAATCTCTGGAATaGCCAAATCATTACTTCCAA +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASPESLE*PNHYFQ
Trigger: TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGG...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAAGGTGCAAAGCCGCCTaGAAGCTGAATAACTGGCAA +
Preference number: 2 (lower is better)
Translates to: PISTSAGFNILTKPAGGKRCKAA*KLNNWQ
Trigger: TTGCCAGTTATTCAGCTTCCAGGCGGCTTTGCACCT...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAACTTCTACAGGAATCTTaGCTGATTCATGGAAAACCA +
Preference number: 2 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKLLQES*LIHGKP
Trigger: TGGTTTTCCATGAATCAGCCAAGATTCCTGTAGAAG...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CACCACTATTCTCACAGCCCAGTAGGCTGCTATCTTCCATCTTCTTaGTCACAATGTTGCAAGTGGCCTCAGATACTTGACTTTCGCCAT +
Preference number: 2 (lower is better)
Translates to: HHYSHSPVGCYLPSS*SQCCKWPQILDFRH
Trigger: ATGGCGAAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGACAAAGAAGATGGAAGATAGCAGCCTACTGGGCTGTGAGAATAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGAAGGAAAGGAATAAATaGAGCCAGGGCCATTTGCGC +
Preference number: 2 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKKERNK*SQGHLR
Trigger: GCGCAAATGGCCCTGGCTTCATTTATTCCTTTCCTT...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTATGGCCAAAGACAACTaGGGTCAGGTGCTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCMAKDN*GQVLCP
Trigger: AGGACAGAGCACCTGACCTCAGTTGTCTTTGGCCAT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCATGAGAAGTCAACCTTaGTGTGCTCATATTAAACAG +
Preference number: 2 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASMRSQP*CAHIKQ
Trigger: CTGTTTAATATGAGCACATCAAGGTTGACTTCTCAT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAATGTGTCTTTCCAGCCTaGTTCCACTTCCTAGTCCAT +
Preference number: 2 (lower is better)
Translates to: PISTSAGFNILTKPAGGKCVFPA*FHFLVH
Trigger: ATGGACTAGGAAGTGGAAGCAGGCTGGAAAGACACA...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTGTGTCTTTCCAGCCTaGTTCCACTTCCTAGTCCAT +
Preference number: 2 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKCVFPA*FHFLVH
Trigger: ATGGACTAGGAAGTGGAAGCAGGCTGGAAAGACACA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACCTGCCTGCAACAAATTaGTTTCTATCCATTTCTCCA +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYLPATN*FLSISP
Trigger: TGGAGAAATGGATAGAAAGCAATTTGTTGCAGGCAG...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACTCCATTTCTTTTGGTTaGAAGGCAAGGACTGGAAAA +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYSISFG*KARTGK
Trigger: TTTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGA...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp AGCAGAAGAGGCAGAGAAGGTATTTTGAGCTGGTGCTGGTATCTGCTCTGTGATTCACTCAGCATGTTGTaGCTGCCAGTTTTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: SRRGREGILSWCWYLLCDSLSML*LPVFLS
Trigger: ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGA...ATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACTCACAATGTTGCAAGTaGCCTCAGATACTTGACTTT +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYSQCCK*PQILDF
Trigger: AAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGA...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACAGTGTATGCTTATTCTaGAAGGACATAAGAGCATCC +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYSVCLF*KDIRAS
Trigger: GGATGCTCTTATGTCCTTCCAGAATAAGCATACACT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACATCTTGGCTGATTCATaGAAAACCACCTCTCTAAAG +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYILADS*KTTSLK
Trigger: CTTTAGAGAGGTGGTTTTCCATGAATCAGCCAAGAT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATCCGACTCTCAACTCTaGTTTTGGGAGAACATTAGA +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGSDSQL*FWENIR
Trigger: TCTAATGTTCTCCCAAAACCAGAGTTGAGAGTCGGA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTTAAAGTGCGGTCAGTaGTGGCATAAACAATGGGGT +
Preference number: 2 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKLKCGQ*WHKQWG
Trigger: ACCCCATTGTTTATGCCAGCACTGACCGCACTTTAA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGAGTGTGTGCTTAAAGTaGGGTCAGTGCTGGCATAAA +
Preference number: 2 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKSVCLK*GQCWHK
Trigger: TTTATGCCAGCACTGACCGCACTTTAAGCACACACT...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAGAAAAACGATTAGTCTaGTATTTGGGTGTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGEKRLV*YLGVKS
Trigger: GCTCTTCACACCCAAATAGCAGACTAATCGTTTTTC...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCTTGGGATAGGGGTTTaGAAGAACAGGGCATTGAAA +
Preference number: 2 (lower is better)
Translates to: VTLDANHSRGHLMINSTSLGIGV*KNRALK
Trigger: TTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGAGGTGCAAAGCCGCCTaGAAGCTGAATAACTGGCAA +
Preference number: 2 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGRCKAA*KLNNWQ
Trigger: TTGCCAGTTATTCAGCTTCCAGGCGGCTTTGCACCT...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACAAAGACCATCTTGAATaGTATCAGAACCTCCTACTT +
Preference number: 2 (lower is better)
Translates to: KPDMATHGLLGQAMEESYKDHLE*YQNLLL
Trigger: AAGTAGGAGGTTCTGATACCATTCAAGATGGTCTTT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp ATCTTCCATCTTCTTTGTCACAATGTTGCAAGTGGCCTCAGATACTaGACTTTCGCCATATGTGTCTTTCCAGCCTGCTTCCACTTCCTA +
Preference number: 2 (lower is better)
Translates to: IFHLLCHNVASGLRY*TFAICVFPACFHFL
Trigger: TAGGAAGTGGAAGCAGGCTGGAAAGACACATATGGCGAAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGACAAAGAAGATGGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp GCTGATATGAGGAAAAACTCTCTCGTTATTAGAGTTGCCCAACTTTaGAGTAATAAATGCATAGCCACCAGAGGCTACCTGACCATGCCC +
Preference number: 2 (lower is better)
Translates to: ADMRKNSLVIRVAQL*SNKCIATRGYLTMP
Trigger: GGGCATGGTCAGGTAGCCTCTGGTGGCTATGCATTTATTACTCAAAAGTTGGGCAACTCTAATAACGAGAGAGTTTTTCCTCATATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCATCTTaGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCCTA +
Preference number: 2 (lower is better)
Translates to: PVFLSPNLHEEGDSS*GSSGLLKRPEENLL
Trigger: TAGGAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR-3UTR TCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTTGCCCCCAGTACTTTTaGAAGGCACAAACAGATCTG +
Preference number: 2 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCCPQYF*KAQTDL
Trigger: CAGATCTGTTTGTGCCTTTCAAAAGTACTGGGGGCA...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAACTTCCCAAAAAGGATaGGAAGTCAACCTTGATGTG +
Preference number: 2 (lower is better)
Translates to: PISTSAGFNILTKPAGGKTSQKG*EVNLDV
Trigger: CACATCAAGGTTGACTTCTCATCCTTTTTGGGAAGT...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGGTGGGGGCAGCAAATaGTGTCCCTTTCTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFGGGSK*CPFLSS
Trigger: TGAGGAAAGAAAGGGACAGCATTTGCTGCCCCCACC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp ATAGATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATTGGCCACCTCACTAATAAACTATCAGTGTaGCTCTCTCTCTTTAAAGAC +
Preference number: 2 (lower is better)
Translates to: IDGRASVPYRFPGIGHLTNKLSV*LSLFKD
Trigger: GTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATT...AGTGAGGTGGCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGCTTGGGATAGGGGTTTaGAAGAACAGGGCATTGAAA +
Preference number: 2 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQLGIGV*KNRALK
Trigger: TTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAG...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGAACATCCATTTCTTTTaGTTGGAAGGCAAGGACTGG +
Preference number: 2 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQNIHFF*LEGKDW
Trigger: CCAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTT...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTAACATCCATTTCTTTTaGTTGGAAGGCAAGGACTGG +
Preference number: 2 (lower is better)
Translates to: LDANHSRGHLMINSTSCCNIHFF*LEGKDW
Trigger: CCAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTT...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTAGAGCATTCTCCAGATaGCTCGAATTACCACAATCA +
Preference number: 2 (lower is better)
Translates to: LDANHSRGHLMINSTSCCRAFSR*LELPQS
Trigger: TGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCT...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR CAA 90 bp CTTTTAATGTTGCCTTTTTGTCCTCAAAGCTGCCTGCTTATTGGGTaGGAAGAACTCACATCTTATGAAGGGTTAGACCCTGCCTTGAAA +
Preference number: 2 (lower is better)
Translates to: LLMLPFCPQSCLLIG*EELTSYEGLDPALK
Trigger: TTTCAAGGCAGGGTCTAACCCTTCATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTTTGAGGACAAAAAGGCAACATTAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAAAGGAAAGGAATAAATaGAGCCAGGGCCATTTGCGC +
Preference number: 2 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQKERNK*SQGHLR
Trigger: GCGCAAATGGCCCTGGCTTCATTTATTCCTTTCCTT...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGGTTGTTGGCCATGTCTaGAGCTATTTATTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGVVGHV*SYLFSL
Trigger: CAAGCTGAATAAATAGCTGCAGACATGGCCAACAAC...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGTCCATTTCTTTTGGTTaGAAGGCAAGGACTGGAAAA +
Preference number: 2 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQSISFG*KARTGK
Trigger: TTTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGA...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTCCATTTCTTTTGGTTaGAAGGCAAGGACTGGAAAA +
Preference number: 2 (lower is better)
Translates to: LDANHSRGHLMINSTSCCSISFG*KARTGK
Trigger: TTTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCAACTGTCATAAAACTTaGGATAGGGGTTTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: VTLDANHSRGHLMINSTSNCHKT*DRGLEE
Trigger: TTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GGAGATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCACATCAAATGGTGTCTaGCCCAGTTTATTTCGAATA +
Preference number: 2 (lower is better)
Translates to: GDSSLGSSGLLKRPEENLTSNGV*PSLFRI
Trigger: TATTCGAAATAAACTGGGCCAGACACCATTTGATGT...GAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR CAA 90 bp CTGCAAACAGGCCAAAAATCCAGACACCTAACAAAGTACATGGCTTaGAGAGTTTCTTCTTCCATCATCTTTGGCTCAATTAAATGCCTC +
Preference number: 2 (lower is better)
Translates to: LQTGQKSRHLTKYMA*RVSSSIIFGSIKCL
Trigger: GAGGCATTTAATTGAGCCAAAGATGATGGAAGAAGAAACTCTCAAAGCCATGTACTTTGTTAGGTGTCTGGATTTTTGGCCTGTTTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp ACAGATGTTCTGACTTCTAGGGTCTTATCTTTTAATGTTGCCTTTTaGTCCTCAAAGCTGCCTGCTTATTGGGTTGGAAGAACTCACATC +
Preference number: 2 (lower is better)
Translates to: TDVLTSRVLSFNVAF*SSKLPAYWVGRTHI
Trigger: GATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTTTGAGGACAAAAAGGCAACATTAAAAGATAAGACCCTAGAAGTCAGAACATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp TCTGCTTGGCAATGCTCTCCATCTCCCTTATGTGGACTCTTGTTCTaGTCTGATCTCTTGTCAAATTGTTATTTTGTAATGAACTGCGTC +
Preference number: 2 (lower is better)
Translates to: SAWQCSPSPLCGLLF*SDLLSNCYFVMNCV
Trigger: GACGCAGTTCATTACAAAATAACAATTTGACAAGAGATCAGACAAGAACAAGAGTCCACATAAGGGAGATGGAGAGCATTGCCAAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CCCACTTCTGCTTGGCAATGCTCTCCATCTCCCTTATGTGGACTCTaGTTCTTGTCTGATCTCTTGTCAAATTGTTATTTTGTAATGAAC +
Preference number: 2 (lower is better)
Translates to: PTSAWQCSPSPLCGL*FLSDLLSNCYFVMN
Trigger: GTTCATTACAAAATAACAATTTGACAAGAGATCAGACAAGAACAAGAGTCCACATAAGGGAGATGGAGAGCATTGCCAAGCAGAAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTGGAATACAGATGTTCTaGCTTCTAGGGTCTTATCTT +
Preference number: 2 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCGIQMF*LLGSYL
Trigger: AAGATAAGACCCTAGAAGTCAGAACATCTGTATTCC...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR GCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCACAACTGAGGTCAGGTaGTCTGTCCTAGCTTTTATA +
Preference number: 2 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSTTEVR*SVLAFI
Trigger: TATAAAAGCTAGGACAGAGCACCTGACCTCAGTTGT...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAGGAAGTGAGGCAGAATaGAGTATTCAGAGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQGSEAE*SIQSPN
Trigger: ATTTGGGCTCTGAATACTCCATTCTGCCTCACTTCC...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp CTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAGCCATaGCAACATCATTCAATTACCCTCAATATTAAATTCACTTCCCAA +
Preference number: 2 (lower is better)
Translates to: LQALIFLPSQQEGKP*QHHSITLNIKFTSQ
Trigger: TTGGGAAGTGAATTTAATATTGAGGGTAATTGAATGATGTTGCAATGGCTTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR TCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTATGAGAAGTCAACCTTaGTGTGCTCATATTAAACAG +
Preference number: 2 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCMRSQP*CAHIKQ
Trigger: CTGTTTAATATGAGCACATCAAGGTTGACTTCTCAT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 90 bp TGCTCTCCATCTCCCTTATGTGGACTCTTGTTCTTGTCTGATCTCTaGTCAAATTGTTATTTTGTAATGAACTGCGTCTCCTTATTAAAG +
Preference number: 2 (lower is better)
Translates to: CSPSPLCGLLFLSDL*SNCYFVMNCVSLLK
Trigger: CTTTAATAAGGAGACGCAGTTCATTACAAAATAACAATTTGACAAGAGATCAGACAAGAACAAGAGTCCACATAAGGGAGATGGAGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CAGGGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTaGCCCTGCCCGAGCTGGCTTTCTCGGCCTGGGTTC +
Preference number: 3 (lower is better)
Translates to: QGFRWGLRRCPC*PCPSWLSRPGF
Trigger: GAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CTCTGTTGCTGTCTTCTTCTACACGGCTGGTCAGGGTaGCTAGGCGGGCCTCCCGGGCCTCCCGACGGGCTC +
Preference number: 3 (lower is better)
Translates to: LCCCLLLHGWSG*LGGPPGPPDGL
Trigger: GAGCCCGTCGGGAGGCCCGGGAGGCCCGCCTAGCCACCCTGACCAGCCGTGTAGAAGAAGACAGCAACAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466273.6
3UTR CCA 72 bp CCCCTGGCCCCATGGGCACCTGAGGGCAGTACTGCATaGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTG +
Preference number: 3 (lower is better)
Translates to: PLAPWAPEGSTA*EEPRMPQAWQL
Trigger: CAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGCCCTCAGGTGCCCATGGGGCCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTTGGGGGAAGACCAGATaGGCACTCTGGTGGGTGCTG +
Preference number: 3 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLWGKTR*ALWWVL
Trigger: CAGCACCCACCAGAGTGCCAATCTGGTCTTCCCCCA...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CCCATGCTGGCCCTGCCCGAGCTGGCTTTCTCGGCCTaGGTTCACAGTTCAGCTCCATCTCTACGCTGGGCG +
Preference number: 3 (lower is better)
Translates to: PMLALPELAFSA*VHSSAPSLRWA
Trigger: CGCCCAGCGTAGAGATGGAGCTGAACTGTGAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp TTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTaGCCGAGCTGGCTTTCTCGGCCTGGGTTCACAGTT +
Preference number: 3 (lower is better)
Translates to: FRWGLRRCPCWP*PSWLSRPGFTV
Trigger: AACTGTGAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GGGAATCAGGCAGGGCGCATTCGAGGAGGCCAGAGGTaGCGAGGCAGGCTTGCCCTGCACAAACCACAACAG +
Preference number: 3 (lower is better)
Translates to: GNQAGRIRGGQR*RGRLALHKPQQ
Trigger: CTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCTGGCCTCCTCGAATGCGCCCTGCCTGATTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp GTTGTCACTCCCTCCTGCTCCCTCAGTCCCGTGTCATaGGAATGGACGGTGTCCAGGGCTTCCGGTGGGGTC +
Preference number: 3 (lower is better)
Translates to: VVTPSCSLSPVS*EWTVSRASGGV
Trigger: GACCCCACCGGAAGCCCTGGACACCGTCCATTCTCATGACACGGGACTGAGGGAGCAGGAGGGAGTGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GAGAACACATGCCAGGCTGTGGAACTGTGGGGAGTGTaGTGGTGCCGGGGAACATTGTCTGGGAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: ENTCQAVELWGV*WCRGTLSGRLG
Trigger: GCCCAGCCTCCCAGACAATGTTCCCCGGCACCACCACACTCCCCACAGTTCCACAGCCTGGCATGTGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTaGCTTTCTCGGCCTGGGTTCACAGTTCAGCTCCAT +
Preference number: 3 (lower is better)
Translates to: GLRRCPCWPCPS*LSRPGFTVQLH
Trigger: ATGGAGCTGAACTGTGAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CTCCATGCCCACCTCAAGGGTGCCGACACTCACCAGTaGCCTGGACCGAAACACTGGCCTTTCTCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: LHAHLKGADTHQ*PGPKHWPFSER
Trigger: CCTCTCAGAGAAAGGCCAGTGTTTCGGTCCAGGCCACTGGTGAGTGTCGGCACCCTTGAGGTGGGCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTaGATACCTTTCCTGGGGTCCCTGTGGAGGCAACCA +
Preference number: 3 (lower is better)
Translates to: GRGADSSGTPWF*IPFLGSLWRQP
Trigger: TGGTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp TACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATaGTTCTGGATACCTTTCCTGGGGTCCCTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: YAGRGADSSGTP*FWIPFLGSLWR
Trigger: CCTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACTGAGCAGCAGGAAGTaGAGGGGTCCACAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGLSSRK*RGPQLS
Trigger: GCTCAGCTGTGGACCCCTCAACTTCCTGCTGCTCAG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTCCTTTCCCTGGTCTATaGAGTGGAAAAGGGTCAAGA +
Preference number: 3 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLPFPGL*SGKGSR
Trigger: TCTTGACCCTTTTCCACTCAATAGACCAGGGAAAGG...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACGACCTGAGCCCCATGTaGTTGGCCATGTCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PVNTGADALPSCILLQSDDLSPM*LAMSAA
Trigger: AGCTGCAGACATGGCCAACAACATGGGGCTCAGGTC...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp AGCCTAGCTTCGCCAAGGTCAGCCCACCAGGAGCCCTaGCTTCGTCTCCATAGGAAGGACACATGTACAGCC +
Preference number: 3 (lower is better)
Translates to: SLASPRSAHQEP*LRLHRKDTCTA
Trigger: GGCTGTACATGTGTCCTTCCTATGGAGACGAAGGCAGGGCTCCTGGTGGGCTGACCTTGGCGAAGCTAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp GCGCATTCGAGGAGGCCAGAGGTGGCGAGGCAGGCTTaGCCTGCACAAACCACAACAGAAGTTGCACACAGA +
Preference number: 3 (lower is better)
Translates to: AHSRRPEVARQA*PAQTTTEVAHR
Trigger: TCTGTGTGCAACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCTGGCCTCCTCGAATGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CTTGCAGCTTCCACCCTGCTCTATGTCCAAAGCCCCTaGGCCTTCTGCCTTCTTCCCATCGCAGCACACAGC +
Preference number: 3 (lower is better)
Translates to: LAASTLLYVQSP*AFCLLPIAAHS
Trigger: GCTGTGTGCTGCGATGGGAAGAAGGCAGAAGGCCCAGGGGCTTTGGACATAGAGCAGGGTGGAAGCTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp TCGGCCTGGGTTCACAGTTCAGCTCCATCTCTACGCTaGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTT +
Preference number: 3 (lower is better)
Translates to: SAWVHSSAPSLR*ARSRQQWDSMV
Trigger: AACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGAGCTGAACTGTGAACCCAGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGCCCAGCCAGGTGGATaGCTTGAGCCCAGCAGCTTC +
Preference number: 3 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGAQPGG*LEPSSF
Trigger: GAAGCTGCTGGGCTCAAGCAATCCACCTGGCTGGGC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCTGAGCAGCAGGAAGTaGAGGGGTCCACAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGLSSRK*RGPQLS
Trigger: GCTCAGCTGTGGACCCCTCAACTTCCTGCTGCTCAG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACTGGCTAGATGTGTGCTaGTCCATCAGGTCCAAAGGC +
Preference number: 3 (lower is better)
Translates to: PVNTGADALPSCILLQSDWLDVC*SIRSKG
Trigger: GCCTTTGGACCTGATGGACAAGCACACATCTAGCCA...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACCTCCAGGAACACCGTaGGCTAGATGTGTGCTTGTC +
Preference number: 3 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGPPGTP*ARCVLV
Trigger: GACAAGCACACATCTAGCCAACGGTGTTCCTGGAGG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAAGTCCCAGGGACCTTaGTGCTGGGAACTGAAAGAG +
Preference number: 3 (lower is better)
Translates to: PVNTGADALPSCILLQSDKSQGP*CWELKE
Trigger: CTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp ACCTGGCCACCCACGTACAAACCCTGCCAGCGGGCCTaGACAGCTCTTCTCTGGGCATGGCTCCTTCATTTT +
Preference number: 3 (lower is better)
Translates to: TWPPTYKPCQRA*TALLWAWLLHF
Trigger: AAAATGAAGGAGCCATGCCCAGAGAAGAGCTGTTCAGGCCCGCTGGCAGGGTTTGTACGTGGGTGGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp GCACCTGTCCTCCAGGAACACCGTTGGCTAGATGTGTaGTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: APVLQEHRWLDV*LSIRSKGMGAV
Trigger: CACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAGCCAACGGTGTTCCTGGAGGACAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp ACATCTCCTGAGAACACATGCCAGGCTGTGGAACTGTaGGGAGTGTGGTGGTGCCGGGGAACATTGTCTGGG +
Preference number: 3 (lower is better)
Translates to: TSPENTCQAVEL*GVWWCRGTLSG
Trigger: CCCAGACAATGTTCCCCGGCACCACCACACTCCCCACAGTTCCACAGCCTGGCATGTGTTCTCAGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAGCTATTTATTCAGCTaGAGCTGCCTGGGGTGCTCA +
Preference number: 3 (lower is better)
Translates to: PVNTGADALPSCILLQSDSYLFS*SCLGCS
Trigger: TGAGCACCCCAGGCAGCTCAAGCTGAATAAATAGCT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTGTAATCCTATCGCTTaGGGAGGCCCAGCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGCNPIA*GGPARW
Trigger: CCACCTGGCTGGGCCTCCCAAAGCGATAGGATTACA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAGCTACTTCTGGCCCTaGCATGTCCCTTATTCAGGA +
Preference number: 3 (lower is better)
Translates to: PVNTGADALPSCILLQSDSYFWP*HVPYSG
Trigger: TCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGCT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGAAGTCCCAGGGACCTTaGTGCTGGGAACTGAAAGAG +
Preference number: 3 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKKSQGP*CWELKE
Trigger: CTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTT...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp GGGATGCTGGCTAGAAAAGGAGGTATTCTGGATTGCTaGCTCCTCTCAGAACCCTCTCCTACCCCGCAGCCT +
Preference number: 3 (lower is better)
Translates to: GMLARKGGILDC*LLSEPSPTPQP
Trigger: AGGCTGCGGGGTAGGAGAGGGTTCTGAGAGGAGGCAGCAATCCAGAATACCTCCTTTTCTAGCCAGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp TACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTaGTTGGCAATGCTCTCCATCTCCCTTATGTGGACT +
Preference number: 3 (lower is better)
Translates to: YSPCPRPSHSHF*LAMLSISLMWT
Trigger: AGTCCACATAAGGGAGATGGAGAGCATTGCCAAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp CTGGAATCAGGTGCTTGGACCAGTGAAGACATGTCTTaGTTCCTCCAGCTCTCTCTGGGGCCCTCCCACTCT +
Preference number: 3 (lower is better)
Translates to: LESGAWTSEDMS*FLQLSLGPSHS
Trigger: AGAGTGGGAGGGCCCCAGAGAGAGCTGGAGGAAGCAAGACATGTCTTCACTGGTCCAAGCACCTGATTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp CACCTGAGGGCAGTACTGCATGGGAAGAGCCCAGGATaGCTCAGGCCTGGCAACTGTGACAAGTATGAGGAA +
Preference number: 3 (lower is better)
Translates to: HLRAVLHGKSPG*LRPGNCDKYEE
Trigger: TTCCTCATACTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGCCCTCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp ATGGTGGGTGAGGGTGGTGAGATGGTCCTGAGGCTCTaGCTTCTAACCCAGAATCTCCCTTCAGGGAAGCAC +
Preference number: 3 (lower is better)
Translates to: MVGEGGEMVLRL*LLTQNLPSGKH
Trigger: GTGCTTCCCTGAAGGGAGATTCTGGGTTAGAAGCCAGAGCCTCAGGACCATCTCACCACCCTCACCCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTGGAGCCTAGCCTACTaGGACAGTTTGCTGATGACT +
Preference number: 3 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFWSLAY*DSLLMT
Trigger: AGTCATCAGCAAACTGTCCAAGTAGGCTAGGCTCCA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290419.9
3UTR-3UTR CAA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGCAGTCACTGTCACCTaGGATGCTAACCATTCCAGA +
Preference number: 3 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGAVTVT*DANHSR
Trigger: TCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCCTTTCCCTGGTCTATaGAGTGGAAAAGGGTCAAGA +
Preference number: 3 (lower is better)
Translates to: PVNTGADALPSCILLQSDPFPGL*SGKGSR
Trigger: TCTTGACCCTTTTCCACTCAATAGACCAGGGAAAGG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCACCAGGGATTTCCGCTaGGCAGGAAACACAGGGCTG +
Preference number: 3 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASTRDFR*AGNTGL
Trigger: CAGCCCTGTGTTTCCTGCCAAGCGGAAATCCCTGGT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp GCACACAGAAGTCCCAGGGACCTTTGTGCTGGGAACTaGAAGAGTGGGGAAGGTGGAGGGGACCATTTCAGA +
Preference number: 3 (lower is better)
Translates to: AHRSPRDLCAGN*KSGEGGGDHFR
Trigger: TCTGAAATGGTCCCCTCCACCTTCCCCACTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTTCTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp ATCGCAGCACACAGCCACCTCCACTTCCAGGGTCTCTaGCCTTTCACTCCAATTACACCAGGTCCTGTAGGA +
Preference number: 3 (lower is better)
Translates to: IAAHSHLHFQGL*PFTPITPGPVG
Trigger: TCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTGGAGGTGGCTGTGTGCTGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp AACTCTCTTCCTTCCCAGTACTTGCAGCTTCCACCCTaGTCTATGTCCAAAGCCCCTGGGCCTTCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: NSLPSQYLQLPP*SMSKAPGPSAF
Trigger: GAAGGCAGAAGGCCCAGGGGCTTTGGACATAGAGCAGGGTGGAAGCTGCAAGTACTGGGAAGGAAGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GACCCTGCCTTGAAAATCAGTATGGTAGGCTGGGCGTaGGCCCTTACGCCTGTAATCCTATCGCTTTGGGAG +
Preference number: 3 (lower is better)
Translates to: DPALKISMVGWA*ALTPVILSLWE
Trigger: CTCCCAAAGCGATAGGATTACAGGCGTAAGGGCCCACGCCCAGCCTACCATACTGATTTTCAAGGCAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GAAGGGGCCTCTATGTGGACAGGAGTTGTAGGAGGCTaGTGGGCGAGGCCCCCACCAATGATAAGATGTAAA +
Preference number: 3 (lower is better)
Translates to: EGASMWTGVVGG*WARPPPMIRCK
Trigger: TTTACATCTTATCATTGGTGGGGGCCTCGCCCACCAGCCTCCTACAACTCCTGTCCACATAGAGGCCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp ACTCCATGGTTCTGGATACCTTTCCTGGGGTCCCTGTaGAGGCAACCAGGATTTTCAGGAGCAGCCAGTCAG +
Preference number: 3 (lower is better)
Translates to: TPWFWIPFLGSL*RQPGFSGAASQ
Trigger: CTGACTGGCTGCTCCTGAAAATCCTGGTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp ACAGCAGTGGGACTCCATGGTTCTGGATACCTTTCCTaGGGTCCCTGTGGAGGCAACCAGGATTTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: TAVGLHGSGYLS*GPCGGNQDFQE
Trigger: CTCCTGAAAATCCTGGTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGACCTGAGCCCCATGTaGTTGGCCATGTCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: KPDMATHGLLGQAMEESYDLSPM*LAMSAA
Trigger: AGCTGCAGACATGGCCAACAACATGGGGCTCAGGTC...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATGAATGGGCTGAGCTGTaGCCACCAGATGCACTGATA +
Preference number: 3 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDEWAEL*PPDALI
Trigger: TATCAGTGCATCTGGTGGCAACAGCTCAGCCCATTC...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTTCTTTTCACCCCTGTaGATCAAGGTCAGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKFFSPL*IKVRAK
Trigger: CTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAA...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTATGGCCTCAACACCTTaGTCACTTAAACCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLMASTP*SLKPGV
Trigger: GACACCAGGTTTAAGTGACAAAGGTGTTGAGGCCAT...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp AGTGACAGACCTGAGCCCCATGTTGTTGGCCATGTCTaGAGCTATTTATTCAGCTTGAGCTGCCTGGGGTGC +
Preference number: 3 (lower is better)
Translates to: SDRPEPHVVGHV*SYLFSLSCLGC
Trigger: GCACCCCAGGCAGCTCAAGCTGAATAAATAGCTGCAGACATGGCCAACAACATGGGGCTCAGGTCTGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GGAGGGCTTCCGGGACACTGGGTTGTAAGCCAAACCTaGGTTCTATGTTTGCCCTCAACCCCAACTCTCAAA +
Preference number: 3 (lower is better)
Translates to: GGLPGHWVVSQT*VLCLPSTPTLK
Trigger: TTTGAGAGTTGGGGTTGAGGGCAAACATAGAACCCAGGTTTGGCTTACAACCCAGTGTCCCGGAAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp ACTTACAGTTCTCCCGAAGGAGGGCTTCCGGGACACTaGGTTGTAAGCCAAACCTGGGTTCTATGTTTGCCC +
Preference number: 3 (lower is better)
Translates to: TYSSPEGGLPGH*VVSQTWVLCLP
Trigger: GGGCAAACATAGAACCCAGGTTTGGCTTACAACCCAGTGTCCCGGAAGCCCTCCTTCGGGAGAACTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CATGTCCCTTATTCAGGAATAGTGGGCCCCGACGACTaGCACTCCGACTCTCAACTCTGGTTTTGGGAGAAC +
Preference number: 3 (lower is better)
Translates to: HVPYSGIVGPDD*HSDSQLWFWEN
Trigger: GTTCTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCCTGAATAAGGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CAGTTTACACCAGCACCTGTCCTCCAGGAACACCGTTaGCTAGATGTGTGCTTGTCCATCAGGTCCAAAGGC +
Preference number: 3 (lower is better)
Translates to: QFTPAPVLQEHR*LDVCLSIRSKG
Trigger: GCCTTTGGACCTGATGGACAAGCACACATCTAGCCAACGGTGTTCCTGGAGGACAGGTGCTGGTGTAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp AGGGGACCATTTCAGAGCAGGCTGGAATCAGGTGCTTaGACCAGTGAAGACATGTCTTGCTTCCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: RGPFQSRLESGA*TSEDMSCFLQL
Trigger: GAGCTGGAGGAAGCAAGACATGTCTTCACTGGTCCAAGCACCTGATTCCAGCCTGCTCTGAAATGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAAACATCCATTTCTTTaGGTTGGAAGGCAAGGACTG +
Preference number: 3 (lower is better)
Translates to: PVNTGADALPSCILLQSDKHPFL*VGRQGL
Trigger: CAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTTT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTTCCTTTTTGCACCTTaGGAGGTGCAAAGCCGCCTG +
Preference number: 3 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASFLFAP*EVQSRL
Trigger: CAGGCGGCTTTGCACCTCCAAAGGTGCAAAAAGGAA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp ATTTCAGAGCAGGCTGGAATCAGGTGCTTGGACCAGTaGAGACATGTCTTGCTTCCTCCAGCTCTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: ISEQAGIRCLDQ*RHVLLPPALSG
Trigger: CCCAGAGAGAGCTGGAGGAAGCAAGACATGTCTTCACTGGTCCAAGCACCTGATTCCAGCCTGCTCTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp TGTGCTTGTTCTGCTGCTGCTTGGGTTACAAACAGCTaGGTGACATCAGGGGAGAAGAATCTTCCCTCCCTG +
Preference number: 3 (lower is better)
Translates to: CACSAAAWVTNS*VTSGEKNLPSL
Trigger: CAGGGAGGGAAGATTCTTCTCCCCTGATGTCACCCAGCTGTTTGTAACCCAAGCAGCAGCAGAACAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GCCATGATGTACAGATGCAGTAGTGTTTGCACTGATTaGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCT +
Preference number: 3 (lower is better)
Translates to: AMMYRCSSVCTD*CRARRGRLPLA
Trigger: AGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAACACTACTGCATCTGTACATCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434615.2
3UTR-3UTR CAA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAATCCATTTCTTTTGGTaGGAAGGCAAGGACTGGAAA +
Preference number: 3 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGIHFFW*EGKDWK
Trigger: TTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGAT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCCACAGACCATTAACTaGAGTTTTAGCTTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLPQTIN*SFSFLA
Trigger: AGCAAGGAAGCTAAAACTCAAGTTAATGGTCTGTGG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGTTTAATGTTGCCTTTTaGTCCTCAAAGCTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEFNVAF*SSKLPA
Trigger: AGCAGGCAGCTTTGAGGACAAAAAGGCAACATTAAA...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTTTGTAAACACTGCTTaGGTAGTCTCCTCTTCAGAC +
Preference number: 3 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKFVNTA*VVSSSD
Trigger: GTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAA...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCCATAAACAATGGGGTTaGAGGGCCCCTGATGATATC +
Preference number: 3 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASHKQWG*RAPDDI
Trigger: GATATCATCAGGGGCCCTCAAACCCCATTGTTTATG...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTaGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAA +
Preference number: 3 (lower is better)
Translates to: GSLELATSLSML*LPVFLSPNLHE
Trigger: TTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR CCA 72 bp GTGTGCTTAAAGTGCGGTCAGTGCTGGCATAAACAATaGGGTTTGAGGGCCCCTGATGATATCTCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: VCLKCGQCWHKQ*GLRAPDDISEG
Trigger: TCCCTCAGAGATATCATCAGGGGCCCTCAAACCCCATTGTTTATGCCAGCACTGACCGCACTTTAAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATaGAGGAGTCATACGGGCCTAAAAGTCAAACCTCAT +
Preference number: 3 (lower is better)
Translates to: QTWLLMVSLARL*RSHTGLKVKPH
Trigger: ATGAGGTTTGACTTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GGCATCCCAGTAGCTTCCATGTTCTGTGTATGTGTGTaGTGTGCCCCTTCCTCCCACTGTTTGAATTCACTG +
Preference number: 3 (lower is better)
Translates to: GIPVASMFCVCV*CAPSSHCLNSL
Trigger: CAGTGAATTCAAACAGTGGGAGGAAGGGGCACACCACACACATACACAGAACATGGAAGCTACTGGGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp AACTGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCATAGGTTCCCTGGAATaGGCCACCTCACTCAGCATG +
Preference number: 3 (lower is better)
Translates to: NCLGIPPYPPKLHLIFVVIGSLE*ATSLSM
Trigger: CATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT...GACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR-3UTR CAA 90 bp TGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGTAGAGCAGAAATCCGAGGGCTaGAAGAGGAGCGATAGATGG +
Preference number: 3 (lower is better)
Translates to: WNSPIPSQTAPYLCCPVEQKSEG*KRSDRW
Trigger: CCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCTG...CTCTACTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR-3UTR CAA 90 bp AGCAGAAGAGGCAGAGAAGGTATTTTGAGCTGGTGCTGGTATCTGCTCTGTGATCAGAAATCCGAGGGCTaGAAGAGGAGCGATAGATGG +
Preference number: 3 (lower is better)
Translates to: SRRGREGILSWCWYLLCDQKSEG*KRSDRW
Trigger: CCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCTG...ATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTACTCTCATCAATGGGTaGAAAGTACTTCATTCCATT +
Preference number: 3 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLTLING*KVLHSI
Trigger: AATGGAATGAAGTACTTTCAACCCATTGATGAGAGT...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTGCCTGCTTATTGGGTaGGAAGAACTCACATCTTAT +
Preference number: 3 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGCLLIG*EELTSY
Trigger: ATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGCA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAAAGCTGCCTGCTTATaGGGTTGGAAGAACTCACAT +
Preference number: 3 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASKAACL*GWKNSH
Trigger: ATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTTT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAGCCTTTCCTGAATCCTaGCTCTTTGAATGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGAFPES*LFEWAE
Trigger: CTCAGCCCATTCAAAGAGCAAGGATTCAGGAAAGGC...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CATCAGTGTGCCTTTCCTGAATCCTTGCTCTTTGAATaGGCTGAGCTGTTGCCACCAGATGCACTGATACAC +
Preference number: 3 (lower is better)
Translates to: HQCAFPESLLFE*AELLPPDALIH
Trigger: GTGTATCAGTGCATCTGGTGGCAACAGCTCAGCCCATTCAAAGAGCAAGGATTCAGGAAAGGCACACTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp AACCATGACATCAAGTGTGCTTGTTCTGCTGCTGCTTaGGTTACAAACAGCTGGGTGACATCAGGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: NHDIKCACSAAA*VTNSWVTSGEK
Trigger: CTTCTCCCCTGATGTCACCCAGCTGTTTGTAACCCAAGCAGCAGCAGAACAAGCACACTTGATGTCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp TGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGTAGAGACCTCACTCAGCATGTaGTGGCTGCCAGTTTTTCTC +
Preference number: 3 (lower is better)
Translates to: WNSPIPSQTAPYLCCPVETSLSM*WLPVFL
Trigger: GAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGT...CTCTACTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR-3UTR CAA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATCTTCTTCCATCATCTTaGGCTCAATTAAATGCCTCT +
Preference number: 3 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDLLPSS*AQLNAS
Trigger: AGAGGCATTTAATTGAGCCAAAGATGATGGAAGAAG...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp TGGGCTGAGCTGTTGCCACCAGATGCACTGATACACTaGTTGATTAGGTTTGTGCTGGGAAGACACACTTCT +
Preference number: 3 (lower is better)
Translates to: WAELLPPDALIH*LIRFVLGRHTS
Trigger: AGAAGTGTGTCTTCCCAGCACAAACCTAATCAATCAGTGTATCAGTGCATCTGGTGGCAACAGCTCAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp CCAGTGGTAGGCACAACCTTTCAAAAGTTCAAGGGATaGTGGCTAGAAAAGGAGGTATTCTGGATTGCTGCC +
Preference number: 3 (lower is better)
Translates to: PVVGTTFQKFKG*WLEKEVFWIAA
Trigger: GGCAGCAATCCAGAATACCTCCTTTTCTAGCCAGCATCCCTTGAACTTTTGAAAGGTTGTGCCTACCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp CCTTTGCATCGGTCATGCTTCTTTGCCTCTGTTTTGTaGCCCAGGACAGGACTGAATTCTTCAACCATGACA +
Preference number: 3 (lower is better)
Translates to: PLHRSCFFASVL*PRTGLNSSTMT
Trigger: TGTCATGGTTGAAGAATTCAGTCCTGTCCTGGGGCACAAAACAGAGGCAAAGAAGCATGACCGATGCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp CCCAGTAGCTTCCATGTTCTGTGTATGTGTGTGGTGTaGCCCTTCCTCCCACTGTTTGAATTCACTGAAAAG +
Preference number: 3 (lower is better)
Translates to: PSSFHVLCMCVV*PFLPLFEFTEK
Trigger: CTTTTCAGTGAATTCAAACAGTGGGAGGAAGGGGCACACCACACACATACACAGAACATGGAAGCTACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp AAGGCACAGATATTTAGGCGAGAGTCAAGCTACTTCTaGCCCTTGCATGTCCCTTATTCAGGAATAGTGGGC +
Preference number: 3 (lower is better)
Translates to: KAQIFRRESSYF*PLHVPYSGIVG
Trigger: GCCCACTATTCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGCTTGACTCTCGCCTAAATATCTGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGGCAGTCACTGTCACCTaGGATGCTAACCATTCCAGA +
Preference number: 3 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKAVTVT*DANHSR
Trigger: TCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAACCAATCTAAGAGTTTaGAGAATCTGCCCCCAGTAC +
Preference number: 3 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGTNLRV*RICPQY
Trigger: GTACTGGGGGCAGATTCTCAAAACTCTTAGATTGGT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAGCCTACTTGGACAGTTaGCTGATGACTCTGATGAGG +
Preference number: 3 (lower is better)
Translates to: TPQSILQMARITTIMLQLAYLDS*LMTLMR
Trigger: CCTCATCAGAGTCATCAGCAAACTGTCCAAGTAGGC...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290419.9
3UTR-3UTR CAA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATTCTATGCAATATGGTaGTGTGGACTCTGGGTTTGT +
Preference number: 3 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGFYAIW*CGLWVC
Trigger: ACAAACCCAGAGTCCACACAACCATATTGCATAGAA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp ACCATAAAGCCAAAGTCTGAGTGTGAACCACTCAACTaGGCACAGGCTGTAGCTTCTCCAAGAAGGATGCAA +
Preference number: 3 (lower is better)
Translates to: TIKPKSECEPLN*AQAVASPRRMQ
Trigger: TTGCATCCTTCTTGGAGAAGCTACAGCCTGTGCTCAGTTGAGTGGTTCACACTCAGACTTTGGCTTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp CTACAACCAGTGGGGGTCAGAAAGAGAAATGACATTTaGAGTCTAGGAACCCTTTGCATCGGTCATGCTTCT +
Preference number: 3 (lower is better)
Translates to: LQPVGVRKRNDI*SLGTLCIGHAS
Trigger: AGAAGCATGACCGATGCAAAGGGTTCCTAGACTGCAAATGTCATTTCTCTTTCTGACCCCCACTGGTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp AACAGATCTGAGGAGGCTCTCTGTAACCCCTTTCCCTaGTCTATTGAGTGGAAAAGGGTCAAGATGTATTCC +
Preference number: 3 (lower is better)
Translates to: NRSEEALCNPFP*SIEWKRVKMYS
Trigger: GGAATACATCTTGACCCTTTTCCACTCAATAGACCAGGGAAAGGGGTTACAGAGAGCCTCCTCAGATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp ATAGATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATTGGCCACCTCACTCAAGCAAATAGCTACTaGAATAAACTATCAGTGTGC +
Preference number: 3 (lower is better)
Translates to: IDGRASVPYRFPGIGHLTQANSY*NKLSVC
Trigger: GCACACTGATAGTTTATTCAAGTAGCTATTTGCTTG...AGTGAGGTGGCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR-3UTR CAA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCCTGAGCCCCATGTTGTaGGCCATGTCTGCAGCTATT +
Preference number: 3 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSLSPML*AMSAAI
Trigger: AATAGCTGCAGACATGGCCAACAACATGGGGCTCAG...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp TTCACTCCAATTACACCAGGTCCTGTAGGAGGCTTGTaGAAGCCAAGTGCTGTTCTATGCAATATGGTTGTG +
Preference number: 3 (lower is better)
Translates to: FTPITPGPVGGL*KPSAVLCNMVV
Trigger: CACAACCATATTGCATAGAACAGCACTTGGCTTTCACAAGCCTCCTACAGGACCTGGTGTAATTGGAGTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp AACAATGACCTCATGAAGACTTATGGATATAGCAGATaGCTAAGGGTGATGGCAGGAGACTTCCATGAGCCC +
Preference number: 3 (lower is better)
Translates to: NNDLMKTYGYSR*LRVMAGDFHEP
Trigger: GGGCTCATGGAAGTCTCCTGCCATCACCCTTAGTCATCTGCTATATCCATAAGTCTTCATGAGGTCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp GGGATTTATCACCTGAGGGTCTCCTGGCTAAGAATATaGGCTTTTTACTCTGCCAATAGGTTGTGGCCTTCT +
Preference number: 3 (lower is better)
Translates to: GIYHLRVSWLRI*AFYSANRLWPS
Trigger: AGAAGGCCACAACCTATTGGCAGAGTAAAAAGCTCATATTCTTAGCCAGGAGACCCTCAGGTGATAAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp CTCGTTATTAGAGTTGCCCAACTTTTGAGTAATAAATaGATAGCCACCAGAGGCTACCTGACCATGCCCATG +
Preference number: 3 (lower is better)
Translates to: LVIRVAQLLSNK*IATRGYLTMPM
Trigger: CATGGGCATGGTCAGGTAGCCTCTGGTGGCTATGCATTTATTACTCAAAAGTTGGGCAACTCTAATAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp GCAATATGGTTGTGTGGACTCTGGGTTTGTAAACACTaGTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAG +
Preference number: 3 (lower is better)
Translates to: AIWLCGLWVCKH*FGSLLFRPALK
Trigger: CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAGTCCACACAACCATATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp CCCCCACCAATGATAAGATGTAAAATCAGAAGAGGCTaGCCCAGATGTGAGATTCTAGAAATCCCATGCTCT +
Preference number: 3 (lower is better)
Translates to: PPPMIRCKIRRG*PRCEILEIPCS
Trigger: AGAGCATGGGATTTCTAGAATCTCACATCTGGGGCAGCCTCTTCTGATTTTACATCTTATCATTGGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTTTCAGCCTCTGGTaGTCGGATTTCAGTTCTGTT +
Preference number: 3 (lower is better)
Translates to: DANHSRGHLMINSTSCCFSFSLW*SDFSSV
Trigger: AACAGAACTGAAATCCGACAACCAGAGGCTGAAAGA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290419.9
3UTR-3UTR CAA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGAATTTTGCACTGGATTaGTATTCTTTCCAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKNFALD*YSFQAW
Trigger: CCAGGCCTGGAAAGAATACAAATCCAGTGCAAAATT...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGCCACAGACCATTAACTaGAGTTTTAGCTTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKPQTIN*SFSFLA
Trigger: AGCAAGGAAGCTAAAACTCAAGTTAATGGTCTGTGG...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp CTACAAGGAGAATCCACAGGCAGACTTCAGCTGATATaGGGAAAAACTCTCTCGTTATTAGAGTTGCCCAAC +
Preference number: 3 (lower is better)
Translates to: LQGESTGRLQLI*GKTLSLLELPN
Trigger: GTTGGGCAACTCTAATAACGAGAGAGTTTTTCCTCATATCAGCTGAAGTCTGCCTGTGGATTCTCCTTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp TACACACACTTTCGTGGGATCCACAGACCATTAACTTaGGTTTTAGCTTCCTTGCTTCCTGAGTGGAACCAT +
Preference number: 3 (lower is better)
Translates to: YTHFRGIHRPLT*VLASLLPEWNH
Trigger: ATGGTTCCACTCAGGAAGCAAGGAAGCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp CTGCCTGCTTATTGGGTTGGAAGAACTCACATCTTATaGAGGGTTAGACCCTGCCTTGAAAATCAGTATGGT +
Preference number: 3 (lower is better)
Translates to: LPAYWVGRTHIL*RVRPCLENQYG
Trigger: ACCATACTGATTTTCAAGGCAGGGTCTAACCCTTCATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp GTTCTTTTGAACGCCAATCTAGGCTTCTCCTTGGCCTaGCTCCATTTAGGAAATTCCTTGATACTACCAGAG +
Preference number: 3 (lower is better)
Translates to: VLLNANLGFSLA*LHLGNSLILPE
Trigger: CTCTGGTAGTATCAAGGAATTTCCTAAATGGAGTCAGGCCAAGGAGAAGCCTAGATTGGCGTTCAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp GTAGGCTGCTATCTTCCATCTTCTTTGTCACAATGTTaGAAGTGGCCTCAGATACTTGACTTTCGCCATATG +
Preference number: 3 (lower is better)
Translates to: VGCYLPSSLSQC*KWPQILDFRHM
Trigger: CATATGGCGAAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGACAAAGAAGATGGAAGATAGCAGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR GCA 72 bp AGAAAGAGAAATGACATTTGCAGTCTAGGAACCCTTTaGATCGGTCATGCTTCTTTGCCTCTGTTTTGTGCC +
Preference number: 3 (lower is better)
Translates to: RKRNDICSLGTL*IGHASLPLFCA
Trigger: GGCACAAAACAGAGGCAAAGAAGCATGACCGATGCAAAGGGTTCCTAGACTGCAAATGTCATTTCTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp CAAGTGCTGTTCTATGCAATATGGTTGTGTGGACTCTaGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: QVLFYAIWLCGL*VCKHCFGSLLF
Trigger: GAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAGTCCACACAACCATATTGCATAGAACAGCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GAGGCTTGTGAAAGCCAAGTGCTGTTCTATGCAATATaGTTGTGTGGACTCTGGGTTTGTAAACACTGCTTT +
Preference number: 3 (lower is better)
Translates to: EACESQVLFYAI*LCGLWVCKHCF
Trigger: AAAGCAGTGTTTACAAACCCAGAGTCCACACAACCATATTGCATAGAACAGCACTTGGCTTTCACAAGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp GAGATGAATTGCGATTGGCTGAAATGTAGGGACTTGTaGGGTCACTACTTCTACCAAATGAAGCACTTCTCT +
Preference number: 3 (lower is better)
Translates to: EMNCDWLKCRDL*GHYFYQMKHFS
Trigger: AGAGAAGTGCTTCATTTGGTAGAAGTAGTGACCCCACAAGTCCCTACATTTCAGCCAATCGCAATTCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434615.2
3UTR-3UTR CAA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTATCCATTTCTTTTGGTaGGAAGGCAAGGACTGGAAA +
Preference number: 3 (lower is better)
Translates to: LDANHSRGHLMINSTSCCIHFFW*EGKDWK
Trigger: TTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGAT...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR CCA 72 bp TTAATCCATACAACTCAGCTGAAAAACAGTTACATCTaGTGTGTGAACCTTGGTGGAACTAGGGTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: LIHTTQLKNSYI*CVNLGGTRVKG
Trigger: ACCCTTCACCCTAGTTCCACCAAGGTTCACACACCAGATGTAACTGTTTTTCAGCTGAGTTGTATGGATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTTGGAAGAACAGGGCATaGAAAGTGCAGAGAAAATGT +
Preference number: 3 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCWKNRA*KVQRKC
Trigger: ACATTTTCTCTGCACTTTCAATGCCCTGTTCTTCCA...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp TGCTATCTTCCATCTTCTTTGTCACAATGTTGCAAGTaGCCTCAGATACTTGACTTTCGCCATATGTGTCTT +
Preference number: 3 (lower is better)
Translates to: CYLPSSLSQCCK*PQILDFRHMCL
Trigger: AAGACACATATGGCGAAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGACAAAGAAGATGGAAGATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp AGTGGAGAAACAGTCAGTAGTTTACACACACTTTCGTaGGATCCACAGACCATTAACTTGAGTTTTAGCTTC +
Preference number: 3 (lower is better)
Translates to: SGETVSSLHTLS*DPQTINLSFSF
Trigger: GAAGCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACTGACTGTTTCTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTATCTTCCATCTTCTTaGTCACAATGTTGCAAGTGG +
Preference number: 3 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGYLPSS*SQCCKW
Trigger: CCACTTGCAACATTGTGACAAAGAAGATGGAAGATA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTAGAGTTGCCCAACTTTaGAGTAATAAATGCATAGCC +
Preference number: 3 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCRVAQL*SNKCIA
Trigger: GGCTATGCATTTATTACTCAAAAGTTGGGCAACTCT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCAGAGTTGCCCAACTTTaGAGTAATAAATGCATAGCC +
Preference number: 3 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSRVAQL*SNKCIA
Trigger: GGCTATGCATTTATTACTCAAAAGTTGGGCAACTCT...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp TCAAATGAGAATGGCCCACTAGAGAATCTGGTACACTaGGTAAGCCCAAAGCATGTCTATTCTTTAGATTCT +
Preference number: 3 (lower is better)
Translates to: SNENGPLENLVH*VSPKHVYSLDS
Trigger: AGAATCTAAAGAATAGACATGCTTTGGGCTTACTCAGTGTACCAGATTCTCTAGTGGGCCATTCTCATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATGCACCTTATCTTTGTaGTCCAGTAGAGCAGAAATC +
Preference number: 3 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFACTLSL*SSRAEI
Trigger: GATTTCTGCTCTACTGGACAACAAAGATAAGGTGCA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAAACTGCACCTTATCTTaGTTGTCCAGTAGAGCAGAA +
Preference number: 3 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFANCTLS*LSSRAE
Trigger: TTCTGCTCTACTGGACAACAAAGATAAGGTGCAGTT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR-3UTR CAA 90 bp ACTACTCTTGCTTTCAGAGTTGGAATGATTGACAAAGGCTTCTGGCTTTTTATCCAAGCAAATAGCTACTaGAATAAACTATCAGTGTGC +
Preference number: 3 (lower is better)
Translates to: TTLAFRVGMIDKGFWLFIQANSY*NKLSVC
Trigger: GCACACTGATAGTTTATTCAAGTAGCTATTTGCTTG...GATAAAAAGCCAGAAGCCTTTGTCAATCATTCCAACTCTGAAAGCAAGAGTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
3UTR TCA 72 bp CTCTCCATCTCCCTTATGTGGACTCTTGTTCTTGTCTaGTCTCTTGTCAAATTGTTATTTTGTAATGAACTG +
Preference number: 3 (lower is better)
Translates to: LSISLMWTLVLV*SLVKLLFCNEL
Trigger: CAGTTCATTACAAAATAACAATTTGACAAGAGATCAGACAAGAACAAGAGTCCACATAAGGGAGATGGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CCA 72 bp ACCTGGTGTCTTCCAAGAAATAACCGTATATACTCTTaGTTACTTGAAGCTTGGAACCTTGATATCTATCTA +
Preference number: 3 (lower is better)
Translates to: TWCLPRNNRIYS*LLEAWNLDIYL
Trigger: TAGATAGATATCAAGGTTCCAAGCTTCAAGTAACCAAGAGTATATACGGTTATTTCTTGGAAGACACCAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR TCA 72 bp TTTGGTCAAGCAAACAATAGCAAGCAAATAGCTACTTaGATAAACTATCAGTGTGCCTCTCTCTCTTTAAAG +
Preference number: 3 (lower is better)
Translates to: FGQANNSKQIAT*INYQCASLSLK
Trigger: CTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATTTGCTTGCTATTGTTTGCTTGACCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
3UTR TCA 72 bp AAAACTTATTACTCTAATTTAGCATTCCCTGAGAACTaGACTTACAGTACTCCCATGATAATACGAAGTCTC +
Preference number: 3 (lower is better)
Translates to: KTYYSNLAFPEN*TYSTPMIIRSL
Trigger: GAGACTTCGTATTATCATGGGAGTACTGTAAGTTCAGTTCTCAGGGAATGCTAAATTAGAGTAATAAGTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TGGCTAGGCGGGCCTCCCGGGCCTCCCGACGGGCTCTTGCTGAAGCCCGGTCACCCGACGGGCTCTTGCTaGAGCCCGGTCACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: WLGGPPGPPDGLLLKPGHPTGSC*SPVTVR
Trigger: TCTTACGGTGACCGGGCTTCAGCAAGAGCCCGTCGG...GTGACCGGGCTTCAGCAAGAGCCCGTCGGGAGGCCCGGGAGGCCCGCCTAGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466273.6
CDS-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGACCCAGATCCTGGCTaGCTGGGGTCAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLDPDPG*LGSDLA
Trigger: GGCCAGGTCTGACCCCAGGCAGCCAGGATCTGGGTC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp TGGCTAGGCGGGCCTCCCGGGCCTCCCGACGGGCTCTaGCTGAAGCCCGGTCACCGTAAGAATCACTGGTTG +
Preference number: 4 (lower is better)
Translates to: WLGGPPGPPDGL*LKPGHRKNHWL
Trigger: CAACCAGTGATTCTTACGGTGACCGGGCTTCAGCAAGAGCCCGTCGGGAGGCCCGGGAGGCCCGCCTAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466273.6
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCCACGGCTGGTCAGGGTaGCTAGGCGGGCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSHGWSG*LGGPPG
Trigger: CCCGGGAGGCCCGCCTAGCCACCCTGACCAGCCGTG...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGCCGACACTCACCAGTaGCCTGGACCGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLADTHQ*PGPKHW
Trigger: CCAGTGTTTCGGTCCAGGCCACTGGTGAGTGTCGGC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCCCTGCCTGCGGCCCCTaGCCCCATGGGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSPACGP*PHGHLR
Trigger: CCTCAGGTGCCCATGGGGCCAGGGGCCGCAGGCAGG...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCGGCCCCTGGCCCCATaGGCACCTGAGGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDRPLAP*APEGST
Trigger: AGTACTGCCCTCAGGTGCCCATGGGGCCAGGGGCCG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTCCCACAGACCACTTCTaGAGGGCTCACCTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLPTDHF*RAHLLS
Trigger: TGACAACAGGTGAGCCCTTCAGAAGTGGTCTGTGGG...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGCATTGTCTGGGAGGCTaGGCGGGGCGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKHCLGG*AGRGGG
Trigger: ACCACCACCCCGCCCCGCCCAGCCTCCCAGACAATG...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGCCGACGGGCTCTTGCTaGAGCCCGGTCACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSPTGSC*SPVTVR
Trigger: TCTTACGGTGACCGGGCTTCAGCAAGAGCCCGTCGG...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCGGCCCCATGGGCACCTaGGGGCAGTACTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSGPMGT*GQYCMG
Trigger: TCCCATGCAGTACTGCCCTCAGGTGCCCATGGGGCC...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACGGGCAGGTTCAGCTGTaGGAGAGGCTCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDGQVQL*ERLRQS
Trigger: GCTCTGCCTGAGCCTCTCTCACAGCTGAACCTGCCC...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGGAGGTATTCTGGATTaGTGCCTCCTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLGGILD*CLLSEP
Trigger: GGGTTCTGAGAGGAGGCAGCAATCCAGAATACCTCC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGACCCAGATCCTGGCTaGCTGGGGTCAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLDPDPG*LGSDLA
Trigger: GGCCAGGTCTGACCCCAGGCAGCCAGGATCTGGGTC...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGCCCTGCCTTGGGAGATaGTGGAGGACCCTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEPCLGR*WRTLSP
Trigger: GGGCGACAGGGTCCTCCAGCATCTCCCAAGGCAGGG...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACGTGGGCCCCGACGACTaGCACTCCGACTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDVGPDD*HSDSQL
Trigger: GAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCAC...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATCCGGGGAACATTGTCTaGGAGGCTGGGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDPGNIV*EAGRGG
Trigger: CCCGCCCCGCCCAGCCTCCCAGACAATGTTCCCCGG...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGTCCAGCCTGGTATCTaGCATCCCAGTAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLVQPGI*HPSSFH
Trigger: ATGGAAGCTACTGGGATGCCAGATACCAGGCTGGAC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGGCTTCTCCTTGGCCTaGCTCCATTTAGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLGFSLA*LHLGNS
Trigger: GGAATTTCCTAAATGGAGTCAGGCCAAGGAGAAGCC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTAGGTGCTTGGACCAGTaGAGACATGTCTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLRCLDQ*RHVLLP
Trigger: AGGAAGCAAGACATGTCTTCACTGGTCCAAGCACCT...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCTACCAGCGATCCCCTaGGAGTGGGGTGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLLPAIP*EWGGQV
Trigger: AACCTGCCCACCCCACTCTCAGGGGATCGCTGGTAG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCGCGCCGAAGCTGCTCTaGCCGCCGCATTCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASAPKLL*PPHSRR
Trigger: TCGGCGCGAATGCGGCGGGCAGAGCAGCTTCGGCGC...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCAGCGCCGAAGCTGCTCTaGCCGCCGCATTCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: GHLTQHVVAASFSQSQSPAPKLL*PPHSRR
Trigger: TCGGCGCGAATGCGGCGGGCAGAGCAGCTTCGGCGC...TGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAACGCCAGCGCCGAAGCTaGTCTGCCCGCCGCATTCGC +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQRQRRS*SARRIR
Trigger: GCGAATGCGGCGGGCAGAGCAGCTTCGGCGCTGGCG...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCACGCTCCGCAGGCTCCTaGTCTGTCAGCGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GHLTQHVVAASFSQSQSPRSAGS*SVSEPR
Trigger: GCGGGGCTCGCTGACAGAGCAGGAGCCTGCGGAGCG...TGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACGCTCCGCAGGCTCCTaGTCTGTCAGCGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPRSAGS*SVSEPR
Trigger: GCGGGGCTCGCTGACAGAGCAGGAGCCTGCGGAGCG...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATGCCCACCTCAAGGGTaGCGACACTCACCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGCPPQG*RHSPVA
Trigger: GGCCACTGGTGAGTGTCGGCACCCTTGAGGTGGGCA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGGTGGCTAGGCGGGCCTCCCGGGCCTCCCGACGGGCTCTTGCTGAAGCCCGGTCTAGAAAGTCTTTCATaGTATGTCAAGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: GWLGGPPGPPDGLLLKPGLESLS*YVKDSR
Trigger: TCTGCTGTCCTTGACATAGCATGAAAGACTTTCTAG...ACCGGGCTTCAGCAAGAGCCCGTCGGGAGGCCCGGGAGGCCCGCCTAGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466273.6
CDS-3UTR CCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGCTCTTCGTCGTTCCTTaGGCCGCCTCCTCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSLFVVP*AASSLG
Trigger: TCCGAGAGAGGAGGCGGCCCAAGGAACGACGAAGAG...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTATCAGGATCCTGGAGTaGCTACCACAAGACTCACCT +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLIRILE*LPQDSP
Trigger: AGGTGAGTCTTGTGGTAGCCACTCCAGGATCCTGAT...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCACCTCGAAGCGGACCCTaGGGCTCCCGCGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GHLTQHVVAASFSQSQSPPRSGP*GSRAWS
Trigger: TGACCAGGCGCGGGAGCCCCAGGGTCCGCTTCGAGG...TGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCGCCTGGGGTCAGACCTaGCCACCCACGTACAAACCC +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSAWGQT*PPTYKP
Trigger: GGGTTTGTACGTGGGTGGCCAGGTCTGACCCCAGGC...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGTCCAGGGCTTCCGGTaGGGTCTCAGGAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLVQGFR*GLRRCP
Trigger: TGGGCATCTCCTGAGACCCCACCGGAAGCCCTGGAC...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp GGCGCATTCGAGGAGGCCAGAGGTGGCGAGGCAGGCTaGCCCTGCACAAACCACAACAGAAGTTGCACACAG +
Preference number: 4 (lower is better)
Translates to: GAFEEARGGEAG*PCTNHNRSCTQ
Trigger: CTGTGTGCAACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACCTCTGGCCTCCTCGAATGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp GAGATGCTGGAGGACCCTGTCGCCCTGAAGGCCTGTTaGCTGCACATCTGCCTGCAGAGCCAAACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EMLEDPVALKAC*LHICLQSQTSG
Trigger: CCCTGAGGTTTGGCTCTGCAGGCAGATGTGCAGCAAACAGGCCTTCAGGGCGACAGGGTCCTCCAGCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATCCCTGCCAGCGGGCCTaGACAGCTCTTCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDPCQRA*TALLWA
Trigger: TGCCCAGAGAAGAGCTGTTCAGGCCCGCTGGCAGGG...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCCCTGCCAGCGGGCCTaGACAGCTCTTCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGPCQRA*TALLWA
Trigger: TGCCCAGAGAAGAGCTGTTCAGGCCCGCTGGCAGGG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCGCTCCGCAGGCTCCTaGTCTGTCAGCGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RFPGIGHLTQHVVAASFSRSAGS*SVSEPR
Trigger: GCGGGGCTCGCTGACAGAGCAGGAGCCTGCGGAGCG...AGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGTCACCCAGGCTGGAGTaGAGTGGCGTGATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSSPRLE*SGVIKA
Trigger: AGCCTTGATCACGCCACTGCACTCCAGCCTGGGTGA...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATGGGGAGTGTGGTGGTaGCGGGGAACATTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGWGVWW*RGTLSG
Trigger: CCCAGACAATGTTCCCCGGCACCACCACACTCCCCA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTAGTGAAGACATGTCTTaGTTCCTCCAGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLSEDMS*FLQLSL
Trigger: CAGAGAGAGCTGGAGGAAGCAAGACATGTCTTCACT...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGGGAAGAGCCCAGGATaGCTCAGGCCTGGCAACTGT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFGKSPG*LRPGNC
Trigger: ACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAAGTGGGCGGGAGTCGGTaGCTGCTCCAGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKVGGSR*LLQSSP
Trigger: AGGGCTGGACTGGAGCAGGCACCGACTCCCGCCCAC...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATCTCTTCGTCGTTCCTTaGGCCGCCTCCTCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHLFVVP*AASSLG
Trigger: TCCGAGAGAGGAGGCGGCCCAAGGAACGACGAAGAG...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAACTCTTCGTCGTTCCTTaGGCCGCCTCCTCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLELFVVP*AASSLG
Trigger: TCCGAGAGAGGAGGCGGCCCAAGGAACGACGAAGAG...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCTTCTTCTACACGGCTaGTCAGGGTGGCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFLLLHG*SGWLGG
Trigger: CCCGCCTAGCCACCCTGACCAGCCGTGTAGAAGAAG...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCCTCGAAGCGGACCCTaGGGCTCCCGCGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGPRSGP*GSRAWS
Trigger: TGACCAGGCGCGGGAGCCCCAGGGTCCGCTTCGAGG...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATGCCGACACTCACCAGTaGCCTGGACCGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHADTHQ*PGPKHW
Trigger: CCAGTGTTTCGGTCCAGGCCACTGGTGAGTGTCGGC...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGGAGTTGTAGGAGGCTaGTGGGCGAGGCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGGVVGG*WARPPP
Trigger: TGGTGGGGGCCTCGCCCACCAGCCTCCTACAACTCC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGGGGGGAAGACCAGATTaGCACTCTGGTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEGGRPD*HSGGCW
Trigger: CCAGCACCCACCAGAGTGCCAATCTGGTCTTCCCCC...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATGGGAGCAGTGTGCATaGGGCACCAGGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLEWEQCA*GTRSSS
Trigger: GGAGGAACTCCTGGTGCCCCATGCACACTGCTCCCA...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACGGCCCCTGGCCCCATaGGCACCTGAGGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPRPLAP*APEGST
Trigger: AGTACTGCCCTCAGGTGCCCATGGGGCCAGGGGCCG...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAACTCCTGCTGGAGATTTaGCCTCCCTTGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLELLLEI*PPLAPP
Trigger: GGGAGGAGCCAAGGGAGGCCAAATCTCCAGCAGGAG...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp GCCTTCGTCTCCATAGGAAGGACACATGTACAGCCCTaGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AFVSIGRTHVQP*PPALSFPLLLG
Trigger: GCCAAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCCTATGGAGACGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAACCACCAGAGGCTACCTaGCCATGCCCATGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLEPPEAT*PCPWVK
Trigger: TTTCACCCATGGGCATGGTCAGGTAGCCTCTGGTGG...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATGCTCAGCTGGAGCCTaGGGGATGAAGTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLECSAGA*GMKSPV
Trigger: CACTGGTGACTTCATCCCTCAGGCTCCAGCTGAGCA...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCGAGGGCTGGACCACGTaGCGGCTAGGTGATACTGTA +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSEGWTT*RLGDTV
Trigger: TACAGTATCACCTAGCCGTCACGTGGTCCAGCCCTC...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGAGGGCTGGACCACGTaGCGGCTAGGTGATACTGTA +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFEGWTT*RLGDTV
Trigger: TACAGTATCACCTAGCCGTCACGTGGTCCAGCCCTC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGGCCCACACATCTCCTaGGAACACATGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLGPHIS*EHMPGC
Trigger: ACAGCCTGGCATGTGTTCTCAGGAGATGTGTGGGCC...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAGGCCCCATGGGCACCTaGGGGCAGTACTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPGPMGT*GQYCMG
Trigger: TCCCATGCAGTACTGCCCTCAGGTGCCCATGGGGCC...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATGGTGAATACAGGGGCTaGCGCTCTTCCCTCGTGCAT +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHGEYRG*RSSLVH
Trigger: ATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACC...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCTCAGTCCCGTGTCATaGGAATGGACGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFLSPVS*EWTVSR
Trigger: CCTGGACACCGTCCATTCTCATGACACGGGACTGAG...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CCTTATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTGGCTCGAGTTGCCGCTaGCGCCTCTCTCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PYRFPGIGHLTQHVVAASGSSCR*RLSQSA
Trigger: AGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCC...ACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTATAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp GGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCACTCCAGTTCCGCCATTaGTCCGGCCTCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHLTQHVVAASFSQSQSPLQFRH*SGLGSC
Trigger: GCAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAG...TGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCCTCCAGTTCCGCCATTaGTCCGGCCTCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASLQFRH*SGLGSC
Trigger: GCAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAG...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAACGCTTCCCTCCTAGGTaGTCCAGTTCCGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLERFPPR*SSSAIA
Trigger: AGCAATGGCGGAACTGGAGCACCTAGGAGGGAAGCG...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTGCGCCGAAGCTGCTCTaGCCGCCGCATTCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: IGSLELATSLSMLWLPVFAPKLL*PPHSRR
Trigger: TCGGCGCGAATGCGGCGGGCAGAGCAGCTTCGGCGC...AAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp ATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCGCCAGCGCCGAAGCTaGTCTGCCCGCCGCATTCGC +
Preference number: 4 (lower is better)
Translates to: IGSLELATSLSMLWLPVFRQRRS*SARRIR
Trigger: GCGAATGCGGCGGGCAGAGCAGCTTCGGCGCTGGCG...AAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTCAACACCCTGAGATTTaGATAACCCTTTCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLQHPEI*ITLSLE
Trigger: CTCTAGCGAAAGGGTTATGCAAATCTCAGGGTGTTG...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACATGGGGGCAGTGAATaGAAGCAGGGATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGHGGSE*KQGWEL
Trigger: CAGCTCCCATCCCTGCTTGCATTCACTGCCCCCATG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGGTGATGGGAGCAGTGTaGATGGGGCACCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKVMGAV*MGHQEF
Trigger: GAACTCCTGGTGCCCCATGCACACTGCTCCCATCAC...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGTGGCGAGGCAGGCTTaGCCTGCACAAACCACAACA +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGVARQA*PAQTTT
Trigger: TGTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCAC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGACGCTCTTCCCTCGTaGATCCTCCTGCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGDALPS*ILLQSD
Trigger: GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGGACGCTCTTCCCTCGTaGATCCTCCTGCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKDALPS*ILLQSD
Trigger: GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTC...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTTCACTCAGCATGTTGTaGCTGCCAGTTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLSLSML*LPVFLS
Trigger: ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGA...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACTCACCATGCAGCTGCTaGCTGCTGGCCAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDSPCSC*LLAKIL
Trigger: CAGAATCTTGGCCAGCAGCCAGCAGCTGCATGGTGA...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGGGCTTCCGGGACACTaGGTTGTAAGCCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFGLPGH*VVSQTW
Trigger: CCAGGTTTGGCTTACAACCCAGTGTCCCGGAAGCCC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGGAAGGGGCCTCTATGTaGACAGGAGTTGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSEGASM*TGVVGG
Trigger: GCCTCCTACAACTCCTGTCCACATAGAGGCCCCTTC...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACCATTGTCTGGGAGGCTaGGCGGGGCGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYHCLGG*AGRGGG
Trigger: ACCACCACCCCGCCCCGCCCAGCCTCCCAGACAATG...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCCCTCTCTCCTGGGGTTaGGGGAAGACCAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSPLSWG*GKTRLA
Trigger: TGCCAATCTGGTCTTCCCCCAACCCCAGGAGAGAGG...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACTCTGGATACCTTTCCTaGGGTCCCTGTGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDSGYLS*GPCGGN
Trigger: GTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGA...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATAGGAGATGCCCATGCTaGCCCTGCCCGAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDRRCPC*PCPSWL
Trigger: AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCT...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGTACAGACAGGGAGGGTaGCCTGCCCAAAGTCACATG +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEYRQGG*PAQSHM
Trigger: CATGTGACTTTGGGCAGGTCACCCTCCCTGTCTGTA...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTACAGACAGGGAGGGTaGCCTGCCCAAAGTCACATG +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKYRQGG*PAQSHM
Trigger: CATGTGACTTTGGGCAGGTCACCCTCCCTGTCTGTA...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGATAGCCGAGGAGCTTTaGAACTGGAATAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEIAEEL*NWNRGR
Trigger: CCGCCCCCTATTCCAGTTTCAAAGCTCCTCGGCTAT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATATCTGTCTGGTGAGGTaGTGGGAGCAGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHICLVR*WEQCAW
Trigger: CCATGCACACTGCTCCCATCACCTCACCAGACAGAT...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTAGAGCATCTGTCTGGTaGGGTGATGGGAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLRASVW*GDGSSV
Trigger: CACACTGCTCCCATCACCTCACCAGACAGATGCTCT...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCGGGCAGGTTCAGCTGTaGGAGAGGCTCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASGQVQL*ERLRQS
Trigger: GCTCTGCCTGAGCCTCTCTCACAGCTGAACCTGCCC...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATCCTTCTGAAGCCATTTaGGCCTCATCTGCCCCCATC +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHPSEAI*ASSAPI
Trigger: GATGGGGGCAGATGAGGCTCAAATGGCTTCAGAAGG...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTGGCTCGAGTTGCCGCTaGCGCCTCTCTCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: RFPGIGHLTQHVVAASFSGSSCR*RLSQSA
Trigger: AGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCC...AGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp AACTGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCGCCAGCGCCGAAGCTaGTCTGCCCGCCGCATTCGC +
Preference number: 4 (lower is better)
Translates to: NCLGIPPYPPKLHLIFVVRQRRS*SARRIR
Trigger: GCGAATGCGGCGGGCAGAGCAGCTTCGGCGCTGGCG...GACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTCAATACATGCCTGGTaGAGGGCTGTCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLSIHAW*RAVKPS
Trigger: GGACGGCTTGACAGCCCTGCACCAGGCATGTATTGA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGTTGCACCTTTGGAGGTaGAAAGCCGCCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWELHLWR*KAAWKL
Trigger: CAGCTTCCAGGCGGCTTTGCACCTCCAAAGGTGCAA...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTTTTTGTCCTCAAAGCTaGCTGCTTATTGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLFCPQS*LLIGLE
Trigger: TTCCAACCCAATAAGCAGGCAGCTTTGAGGACAAAA...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATCTGCAGGGAAATCATTaGCCTGGTGTGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHLQGNH*PGVPAS
Trigger: ACTGGCTGGCACACCAGGGCAATGATTTCCCTGCAG...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTAAAATCAGAAGAGGCTaGCCCAGATGTGAGATTCTA +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLKIRRG*PRCEIL
Trigger: TAGAATCTCACATCTGGGGCAGCCTCTTCTGATTTT...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCCTGGACCGAAACACTaGCCTTTCTCTGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDPGPKH*PFSERR
Trigger: TCTCCTCTCAGAGAAAGGCCAGTGTTTCGGTCCAGG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTATGTCCAAAGCCCCTaGGCCTTCTGCCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHYVQSP*AFCLLP
Trigger: GGGAAGAAGGCAGAAGGCCCAGGGGCTTTGGACATA...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCTCCTTGGCCAGGCTATaGAGGAGTCATACGGGCCTA +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSSLARL*RSHTGL
Trigger: TAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGA...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGCAGGGCTTGCTGGATaGAGAAACCAGACCCAGATC +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFAGLAG*RNQTQI
Trigger: GATCTGGGTCTGGTTTCTCCATCCAGCAAGCCCTGC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATGGGAACTGAAAGAGTaGGGAAGGTGGAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLEWELKE*GRWRGP
Trigger: TGGTCCCCTCCACCTTCCCCACTCTTTCAGTTCCCA...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCAGGCAGAGCAGGTGTaGACTAAGTCCCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFQAEQV*TKSPDL
Trigger: AAGGTCAGGGGACTTAGTCCACACCTGCTCTGCCTG...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATCCCCTGAGAGTGGGGTaGGCAGGTTCAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDPLRVG*AGSAVR
Trigger: TCTCACAGCTGAACCTGCCCACCCCACTCTCAGGGG...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGTTCCTGGGGTCCCTGTaGAGGCAACCAGGATTTTCA +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSFLGSL*RQPGFS
Trigger: TGAAAATCCTGGTTGCCTCCACAGGGACCCCAGGAA...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGGGACTCCATGGTTCTaGATACCTTTCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFGTPWF*IPFLGS
Trigger: GGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATGCTCCATCTCTACGCTaGGCGAGGAGCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDAPSLR*ARSRQQ
Trigger: CTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGAGC...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGTCAGTTCCTGAGAGGTaGAGAAGAATAGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSSVPER*RRIERL
Trigger: GAGGCGCTCTATTCTTCTTCACCTCTCAGGAACTGA...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAATGGCCAAAGACAACTaGGGTCAGGTGCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGMAKDN*GQVLCP
Trigger: AGGACAGAGCACCTGACCTCAGTTGTCTTTGGCCAT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTACACTGGCCTTTCTCTaGGAGGAGACAGTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLTLAFL*EETVSV
Trigger: GACAGACACTGTCTCCTCTCAGAGAAAGGCCAGTGT...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCTCTCCCCAAGTCAGTaGCCAGGGATTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGLSPSQ*PGISAW
Trigger: CCAAGCGGAAATCCCTGGTCACTGACTTGGGGAGAG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAACGCTCCGCAGGCTCCTaGTCTGTCAGCGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKRSAGS*SVSEPR
Trigger: GCGGGGCTCGCTGACAGAGCAGGAGCCTGCGGAGCG...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTTGCAGCTTCCACCCTaGTCTATGTCCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLLQLPP*SMSKAP
Trigger: AGGGGCTTTGGACATAGAGCAGGGTGGAAGCTGCAA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGCACGGCTGGTCAGGGTaGCTAGGCGGGCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQHGWSG*LGGPPG
Trigger: CCCGGGAGGCCCGCCTAGCCACCCTGACCAGCCGTG...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACTTCTTCTACACGGCTaGTCAGGGTGGCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPLLLHG*SGWLGG
Trigger: CCCGCCTAGCCACCCTGACCAGCCGTGTAGAAGAAG...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGATCAGGATCCTGGAGTaGCTACCACAAGACTCACCT +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSIRILE*LPQDSP
Trigger: AGGTGAGTCTTGTGGTAGCCACTCCAGGATCCTGAT...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAACCTCGAAGCGGACCCTaGGGCTCCCGCGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKPRSGP*GSRAWS
Trigger: TGACCAGGCGCGGGAGCCCCAGGGTCCGCTTCGAGG...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTTTGCACTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGTGTTTGCACTGATTaGTGCAGGGCAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VCTDWCRARRGRLPLAAPSVCTD*CRARRG
Trigger: GCCTCTTCTTGCCCTGCACCAATCAGTGCAAACACT...CGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR CCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTTCACAATGTTGCAAGTaGCCTCAGATACTTGACTTT +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLSQCCK*PQILDF
Trigger: AAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGA...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATGACAGTGTCTGTCTGTaGCTAGGAGAGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHDSVCL*LGEAAN
Trigger: GTTTGCAGCCTCTCCTAGCCACAGACAGACACTGTC...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAAATCTCTGCTCAGCTaGAGCCTGAGGGATGAAGTC +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDKSLLS*SLRDEV
Trigger: GACTTCATCCCTCAGGCTCCAGCTGAGCAGAGATTT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTCTTCTACAGGAATCTTaGCTGATTCATGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLLLQES*LIHGKP
Trigger: TGGTTTTCCATGAATCAGCCAAGATTCCTGTAGAAG...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACGGTGGTGGTGGTGGTTaGTATACCCAACTTCTACAG +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDGGGGG*YTQLLQ
Trigger: CTGTAGAAGTTGGGTATACCAACCACCACCACCACC...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTACTCATGGTCTCCTTaGCCAGGCTATGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKYSWSP*PGYGGV
Trigger: GACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTA...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACTGGGTTACAAACAGCTaGGTGACATCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDWVTNS*VTSGEK
Trigger: CTTCTCCCCTGATGTCACCCAGCTGTTTGTAACCCA...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGCATTTCAGAGCAGGCTaGAATCAGGTGCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSHFRAG*NQVLGP
Trigger: TGGTCCAAGCACCTGATTCCAGCCTGCTCTGAAATG...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGAAAGAGTGGGGAAGGTaGAGGGGACCATTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKKEWGR*RGPFQS
Trigger: GCTCTGAAATGGTCCCCTCCACCTTCCCCACTCTTT...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCCCTGCCTGCGGCCCCTaGCCCCATGGGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSPACGP*PHGHLR
Trigger: CCTCAGGTGCCCATGGGGCCAGGGGCCGCAGGCAGG...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATGGCCCTGCCCGAGCTaGCTTTCTCGGCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGWPCPS*LSRPGF
Trigger: GAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTTCTGTGTATGTGTGTaGTGTGCCCCTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFFCVCV*CAPSSH
Trigger: GTGGGAGGAAGGGGCACACCACACACATACACAGAA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATGTCCAGCCTGGTATCTaGCATCCCAGTAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHVQPGI*HPSSFH
Trigger: ATGGAAGCTACTGGGATGCCAGATACCAGGCTGGAC...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp AGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTaGGCAATGCTCTCCATCTCCCTTATGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: SPCPRPSHSHFC*AMLSISLMWTL
Trigger: AAGAGTCCACATAAGGGAGATGGAGAGCATTGCCAAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAAAAAGGAGACCTGCTaGTGCCAGTATCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDKKETC*CQYPER
Trigger: TCTCTCTGGATACTGGCATCAGCAGGTCTCCTTTTT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTATGAGAAGTCAACCTTaGTGTGCTCATATTAAACAG +
Preference number: 4 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLMRSQP*CAHIKQ
Trigger: CTGTTTAATATGAGCACATCAAGGTTGACTTCTCAT...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGGGTCTACTGCTTCCTaGGCAGTGTCAATACCCATT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFGSTAS*AVSIPI
Trigger: AATGGGTATTGACACTGCTCAGGAAGCAGTAGACCC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATATCAATAGCTGTCCCTaGCAGGGTCTACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHINSCP*QGLLLP
Trigger: AGGAAGCAGTAGACCCTGTCAGGGACAGCTATTGAT...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACCTTCTCAGTGGCCATaGCTCACTGTGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPPSQWP*LTVAVP
Trigger: AGGGACAGCCACAGTGAGTCATGGCCACTGAGAAGG...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTTGTTTTTGCTGCGCTaGGGTGGGGGTGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASLFLLR*GGGEGV
Trigger: CACTCCCTCACCCCCACCTCAGCGCAGCAAAAACAA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAGTCATCCTGTTGAACTaGGAGGGACAGGTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQVILLN*EGQVAP
Trigger: GGGGGCTACCTGTCCCTCTCAGTTCAACAGGATGAC...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATCAGCTCAGCCAGGGATaGCAGAACCATCCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDQLSQG*QNHPCL
Trigger: TAAGCAGGGATGGTTCTGTCATCCCTGGCTGAGCTG...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCAGCTCAGCCAGGGATaGCAGAACCATCCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGQLSQG*QNHPCL
Trigger: TAAGCAGGGATGGTTCTGTCATCCCTGGCTGAGCTG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGGTCTTTTCTTGTTTCTaGTGGGCCACCTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSVFSCF*WATFSS
Trigger: GCTTGAGAAGGTGGCCCAGCAGAAACAAGAAAAGAC...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATAGAGCGCCTCAATaGAGTCACTGTCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSNRAPQ*SHCHLG
Trigger: TCCAAGGTGACAGTGACTGCATTGAGGCGCTCTATT...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATGTTGGGGCTCGAGTTaGCGCTGCCGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGCWGSS*RCRLSQ
Trigger: CTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGTAGAGCTCCAGTTCCGCCATTaGTCCGGCCTCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: WNSPIPSQTAPYLCCPVELQFRH*SGLGSC
Trigger: GCAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAG...CTCTACTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp GTTTGCACTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGATGCAGTAGTGTTTaGACTGATTGGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VCTDWCRARRGRLPLAAPRCSSV*TDWCRA
Trigger: TGCCCTGCACCAATCAGTGCAAACACTACTGCATCT...CGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCCTGGGTTCTATGTTTaGCCTCAACCCCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLPGFYV*PQPQLS
Trigger: TGAGAGTTGGGGTTGAGGGCAAACATAGAACCCAGG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGGTATTCTGGATTGCTaGCTCCTCTCAGAACCCTCT +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLGILDC*LLSEPS
Trigger: AGAGGGTTCTGAGAGGAGGCAGCAATCCAGAATACC...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGGGTATTCTGGATTGCTaGCTCCTCTCAGAACCCTCT +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKGILDC*LLSEPS
Trigger: AGAGGGTTCTGAGAGGAGGCAGCAATCCAGAATACC...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATCGGTCATGCTTCTTTaGCTCTGTTTTGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLESVMLL*LCFVPQ
Trigger: CTGGGGCACAAAACAGAGGCAAAGAAGCATGACCGA...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGTCTCATTCCCACTTCTaGTTGGCAATGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSSHSHF*LAMLSI
Trigger: GATGGAGAGCATTGCCAAGCAGAAGTGGGAATGAGA...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGTTCCTCCATCCCACCTaGCTTAGCGATCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEFLHPT*LSDQDF
Trigger: AAAGTCCTGATCGCTAAGGCAGGTGGGATGGAGGAA...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTTCCTCCATCCCACCTaGCTTAGCGATCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFFLHPT*LSDQDF
Trigger: AAAGTCCTGATCGCTAAGGCAGGTGGGATGGAGGAA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCATAAAGGGGGCCTCCTaGTGGAGATTTGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGIKGAS*WRFGLP
Trigger: AGGGAGGCCAAATCTCCAGCAGGAGGCCCCCTTTAT...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATGTCCGAGGACTCGATaGACTCCGAGAGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPCPRTR*TPRVWP
Trigger: TGGCCAGACTCTCGGAGTCCATCGAGTCCTCGGACA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCTGCTGTTTCTCTTaGCACCCCAATCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHSCCFS*HPNQDP
Trigger: AGGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGA...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCACACTAAATTACTGTTaGGGCTCGAGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSTLNYC*GSSCRC
Trigger: GCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATCCAGGGAGCAGGCAGTaGTGCTGCCACCAAGGCACC +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINPGSRQ*CCHQGT
Trigger: GGTGCCTTGGTGGCAGCACCACTGCCTGCTCCCTGG...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCCTTTCGCTAGAGATTaGGATGGGGCTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGPFARD*DGAGVI
Trigger: GATGACCCCAGCCCCATCCCAATCTCTAGCGAAAGG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAAAGGTGCAAAGCCGCCTaGAAGCTGAATAACTGGCAA +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLERCKAA*KLNNWQ
Trigger: TTGCCAGTTATTCAGCTTCCAGGCGGCTTTGCACCT...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGAGGTGCAAAGCCGCCTaGAAGCTGAATAACTGGCAA +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKRCKAA*KLNNWQ
Trigger: TTGCCAGTTATTCAGCTTCCAGGCGGCTTTGCACCT...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCTGCTGGCATAAACAATaGGGTTTGAGGGCCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSCWHKQ*GLRAPD
Trigger: ATCAGGGGCCCTCAAACCCCATTGTTTATGCCAGCA...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTATGTCCAAAGCCCCTaGGCCTTCTGCCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGYVQSP*AFCLLP
Trigger: GGGAAGAAGGCAGAAGGCCCAGGGGCTTTGGACATA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGAAATCTCTGCTCAGCTaGAGCCTGAGGGATGAAGTC +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEKSLLS*SLRDEV
Trigger: GACTTCATCCCTCAGGCTCCAGCTGAGCAGAGATTT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAAGACATGGCTACTCATaGTCTCCTTGGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGRHGYS*SPWPGY
Trigger: ATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATGTGCTAGTGTTCACCTaGATGGCCTCAACACCTTTG +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHVLVFT*MASTPL
Trigger: CAAAGGTGTTGAGGCCATCCAGGTGAACACTAGCAC...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGCAGGGCTTGCTGGATaGAGAAACCAGACCCAGATC +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGAGLAG*RNQTQI
Trigger: GATCTGGGTCTGGTTTCTCCATCCAGCAAGCCCTGC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAACTGTGGGGAGTGTGGTaGTGCCGGGGAACATTGTCT +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQLWGVW*CRGTLS
Trigger: AGACAATGTTCCCCGGCACCACCACACTCCCCACAG...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCAGCAGTGGGACTCCATaGTTCTGGATACCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFSSGTP*FWIPFL
Trigger: CAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCT...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTTCTTCCTCCATTTCTaGCATTTTGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHFFLHF*HFALQG
Trigger: GCCTTGGAGCGCAAAATGTCAGAAATGGAGGAAGAA...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGCTTTCAGAGTTGGAATaGTTGACAAAGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSLSELE*LTKASG
Trigger: GCCAGAAGCCTTTGTCAATCATTCCAACTCTGAAAG...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCTGGTATCTGCTCTGTaGTACTACTCTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDLVSAL*YYSCFQ
Trigger: CTGAAAGCAAGAGTAGTATCACAGAGCAGATACCAG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAGTGGCCTCAGATACTTaGCTTTCGCCATATGTGTCT +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGVASDT*LSPYVS
Trigger: AGACACATATGGCGAAAGTCAAGTATCTGAGGCCAC...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACCCACCAGAGGCTACCTaGCCATGCCCATGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYPPEAT*PCPWVK
Trigger: TTTCACCCATGGGCATGGTCAGGTAGCCTCTGGTGG...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGGCATTCCCTGAGAACTaGACTTACAGTACTCCCATG +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEAFPEN*TYSTPM
Trigger: CATGGGAGTACTGTAAGTTCAGTTCTCAGGGAATGC...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACCCAGCAGGTGAGGACTaGGGATTGTGGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYPAGED*GLWPLK
Trigger: CTTCAGTGGCCACAATCCTCAGTCCTCACCTGCTGG...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCTTTTCACCCCTGTTaGTCAAGGTCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFSFHPC*SRSGQR
Trigger: TCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTAGAAATCCCATGCTCTaGACTGTGGAGACAGTCACA +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLRNPML*TVETVT
Trigger: TGTGACTGTCTCCACAGTTCAGAGCATGGGATTTCT...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAATCTGTCTGGTGAGGTaGTGGGAGCAGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQICLVR*WEQCAW
Trigger: CCATGCACACTGCTCCCATCACCTCACCAGACAGAT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGGTCTTTTCTTGTTTCTaGTGGGCCACCTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEVFSCF*WATFSS
Trigger: GCTTGAGAAGGTGGCCCAGCAGAAACAAGAAAAGAC...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAATAGAGCGCCTCAATaGAGTCACTGTCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSNRAPQ*SHCHLG
Trigger: TCCAAGGTGACAGTGACTGCATTGAGGCGCTCTATT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGCAGAAGAGGCAGAGAAGGTATTTTGAGCTGGTGCTGGTATCTGCTCTGTGATTGTTGGGGCTCGAGTTaGCGCTGCCGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SRRGREGILSWCWYLLCDCWGSS*RCRLSQ
Trigger: CTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACA...ATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR GCA 90 bp TCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTTCCGGCCTCGGCAGCTaGTGCCAAAACTACCAACAC +
Preference number: 4 (lower is better)
Translates to: SLELATSLSMLWLPVFLSSGLGS*CQNYQH
Trigger: GTGTTGGTAGTTTTGGCAGCAGCTGCCGAGGCCGGA...ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGCGCCGAAGCTGCTCTaGCCGCCGCATTCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAAPKLL*PPHSRR
Trigger: TCGGCGCGAATGCGGCGGGCAGAGCAGCTTCGGCGC...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTCGCCAGCGCCGAAGCTaGTCTGCCCGCCGCATTCGC +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCRQRRS*SARRIR
Trigger: GCGAATGCGGCGGGCAGAGCAGCTTCGGCGCTGGCG...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGCTGGTGCTGGTATCTaGTCTGTGATACTACTCTTG +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLAGAGI*SVILLL
Trigger: CAAGAGTAGTATCACAGAGCAGATACCAGCACCAGC...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGAGATGCAGTAGTGTTTaGACTGATTGGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWERCSSV*TDWCRA
Trigger: TGCCCTGCACCAATCAGTGCAAACACTACTGCATCT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR GCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATTGCACCTTTGGAGGTaGAAAGCCGCCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPLHLWR*KAAWKL
Trigger: CAGCTTCCAGGCGGCTTTGCACCTCCAAAGGTGCAA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGGCTGTTGCCACCAGATaGACTGATACACTGATTGAT +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSAVATR*TDTLID
Trigger: ATCAATCAGTGTATCAGTGCATCTGGTGGCAACAGC...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGTTTGCCTCTGTTTTGTaGCCCAGGACAGGACTGAAT +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEFASVL*PRTGLN
Trigger: ATTCAGTCCTGTCCTGGGGCACAAAACAGAGGCAAA...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGCGTTGGCTAGATGTGTaGTTGTCCATCAGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKRWLDV*LSIRSK
Trigger: TTTGGACCTGATGGACAAGCACACATCTAGCCAACG...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTCTCATTCCCACTTCTaGTTGGCAATGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLSHSHF*LAMLSI
Trigger: GATGGAGAGCATTGCCAAGCAGAAGTGGGAATGAGA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGGTGATGGGAGCAGTGTaGATGGGGCACCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGVMGAV*MGHQEF
Trigger: GAACTCCTGGTGCCCCATGCACACTGCTCCCATCAC...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTGCCCATGCTGGCCCTaGCCGAGCTGGCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKCPCWP*PSWLSR
Trigger: CCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACTGCTGCACATCTGCCTaGAGAGCCAAACCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYCCTSA*RAKPQG
Trigger: GCCCTGAGGTTTGGCTCTGCAGGCAGATGTGCAGCA...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAGCGGGAGTCGGTGCCTaGTCCAGTCCAGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLAGVGA*SSPALP
Trigger: AGGCAGGGCTGGACTGGAGCAGGCACCGACTCCCGC...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAGTGGGCGGGAGTCGGTaGCTGCTCCAGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLVGGSR*LLQSSP
Trigger: AGGGCTGGACTGGAGCAGGCACCGACTCCCGCCCAC...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATGACTTCCCACAATaGCCAAAGACAACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSNDFPQ*PKTTEV
Trigger: GACCTCAGTTGTCTTTGGCCATTGTGGGAAGTCATT...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCCAGGGAGCAGGCAGTaGTGCTGCCACCAAGGCACC +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSPGSRQ*CCHQGT
Trigger: GGTGCCTTGGTGGCAGCACCACTGCCTGCTCCCTGG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACCAGGCTGGAGTGCAGTaGCGTGATCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYQAGVQ*RDQGSL
Trigger: CAGTGAGCCTTGATCACGCCACTGCACTCCAGCCTG...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGAAGGGTCATGTGAAGTaGCAGGGATGCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEKGHVK*QGCNTN
Trigger: ATTGGTGTTGCATCCCTGCCACTTCACATGACCCTT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAAAAGTGCGGTCAGTGCTaGCATAAACAATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLEKCGQC*HKQWGL
Trigger: CAAACCCCATTGTTTATGCCAGCACTGACCGCACTT...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTACTCATGGTCTCCTTaGCCAGGCTATGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGYSWSP*PGYGGV
Trigger: GACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATGTGGGCCCCGACGACTaGCACTCCGACTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINVGPDD*HSDSQL
Trigger: GAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCAC...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGAGTCAAGCTACTTCTaGCCCTTGCATGTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFESSYF*PLHVPY
Trigger: ATAAGGGACATGCAAGGGCCAGAAGTAGCTTGACTC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAACCGGGGAACATTGTCTaGGAGGCTGGGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKPGNIV*EAGRGG
Trigger: CCCGCCCCGCCCAGCCTCCCAGACAATGTTCCCCGG...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCTGGAATCAGGTGCTTaGACCAGTGAAGACATGTCT +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLLESGA*TSEDMS
Trigger: AGACATGTCTTCACTGGTCCAAGCACCTGATTCCAG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGGAGGGCAGTACTGCATaGGAAGAGCCCAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGEGSTA*EEPRMP
Trigger: AGGCATCCTGGGCTCTTCCCATGCAGTACTGCCCTC...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTTCTGTGTATGTGTGTaGTGTGCCCCTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGFCVCV*CAPSSH
Trigger: GTGGGAGGAAGGGGCACACCACACACATACACAGAA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp ATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATaGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: MEEPRSLIGSLE*ATSLSMLWLPV
Trigger: AACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR CAA 72 bp CACAACAGAAGTTGCACACAGAAGTCCCAGGGACCTTaGTGCTGGGAACTGAAAGAGTGGGGAAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HNRSCTQKSQGP*CWELKEWGRWR
Trigger: CCTCCACCTTCCCCACTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTTCTGTGTGCAACTTCTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAACCGACGGGCTCTTGCTaGAGCCCGGTCACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKPTGSC*SPVTVR
Trigger: TCTTACGGTGACCGGGCTTCAGCAAGAGCCCGTCGG...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCCTGAATTAAAAGTCTaGGGACTTCAGAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFPELKV*GLQSSP
Trigger: AGGGCTACTCTGAAGTCCTCAGACTTTTAATTCAGG...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAATGGCCAAAGACAACTaGGGTCAGGTGCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPMAKDN*GQVLCP
Trigger: AGGACAGAGCACCTGACCTCAGTTGTCTTTGGCCAT...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACTTTCCCTGGTCTATTaGGTGGAAAAGGGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGLSLVY*VEKGQD
Trigger: ATCTTGACCCTTTTCCACTCAATAGACCAGGGAAAG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCTAGGGAACATCAAATaGGAATGGCCCACTAGAGAA +
Preference number: 4 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLLGNIK*EWPTRE
Trigger: TTCTCTAGTGGGCCATTCTCATTTGATGTTCCCTAG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGCTCTCAAAGGAGAAGTaGATGCATCTTTCACCATGC +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWELSKEK*MHLSPC
Trigger: GCATGGTGAAAGATGCATTCACTTCTCCTTTGAGAG...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAACTTTGTGCTGGGAACTaGAAGAGTGGGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQLCAGN*KSGEGG
Trigger: TCCACCTTCCCCACTCTTTCAGTTCCCAGCACAAAG...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCTACCAGCGATCCCCTaGGAGTGGGGTGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSLPAIP*EWGGQV
Trigger: AACCTGCCCACCCCACTCTCAGGGGATCGCTGGTAG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAATCAGGGAGAGGCCGGTaGATACAGGGGCTGACGCTC +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKSGRGR*IQGLTL
Trigger: GAGCGTCAGCCCCTGTATTCACCGGCCTCTCCCTGA...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTTTGCACTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGTCTTTTCAAGTAAGTTaGTACATAGGTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VCTDWCRARRGRLPLAAPSFQVS*YIGGGS
Trigger: GCTCCCTCCACCTATGTATCAACTTACTTGAAAAGA...CGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR TCA 90 bp CTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGAGGTAACTACTTCTACCAAATaGAGCACTTCTCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: LIGAGQEEAGCHWLPREVTTSTK*STSLHQ
Trigger: TTGGTGCAGAGAAGTGCTTCATTTGGTAGAAGTAGT...TACCTCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR GCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCATCAATTCAACATCCTaGTGTTTCTCTTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSINSTS*CFSWHP
Trigger: GGGGTGCCAAGAGAAACAGCAGGATGTTGAATTGAT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATCCGGCCTCGGCAGCTaGTGCCAAAACTACCAACAC +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGSGLGS*CQNYQH
Trigger: GTGTTGGTAGTTTTGGCAGCAGCTGCCGAGGCCGGA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCCTCCAGTTCCGCCATTaGTCCGGCCTCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFLQFRH*SGLGSC
Trigger: GCAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAG...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGCGCTTCCCTCCTAGGTaGTCCAGTTCCGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: CLGIPPYPPKLHLIFVVQRFPPR*SSSAIA
Trigger: AGCAATGGCGGAACTGGAGCACCTAGGAGGGAAGCG...CTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp ATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCGCTTCCCTCCTAGGTaGTCCAGTTCCGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: IGSLELATSLSMLWLPVFRFPPR*SSSAIA
Trigger: AGCAATGGCGGAACTGGAGCACCTAGGAGGGAAGCG...AAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp TCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTTCAATACATGCCTGGTaGAGGGCTGTCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SLELATSLSMLWLPVFLSSIHAW*RAVKPS
Trigger: GGACGGCTTGACAGCCCTGCACCAGGCATGTATTGA...ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCGGGAGCAGGCAGTGGTaGTGCCACCAAGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSGSRQW*CHQGTR
Trigger: TCTGGTGCCTTGGTGGCAGCACCACTGCCTGCTCCC...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGTGAAGTGGCAGGGATaGAACACCAATCTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFVKWQG*NTNLRV
Trigger: AACTCTTAGATTGGTGTTGCATCCCTGCCACTTCAC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCGTGAAGTGGCAGGGATaGAACACCAATCTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSVKWQG*NTNLRV
Trigger: AACTCTTAGATTGGTGTTGCATCCCTGCCACTTCAC...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATCAACACCCTGAGATTTaGATAACCCTTTCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHQHPEI*ITLSLE
Trigger: CTCTAGCGAAAGGGTTATGCAAATCTCAGGGTGTTG...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATTGCAGCTTCCACCCTaGTCTATGTCCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPLQLPP*SMSKAP
Trigger: AGGGGCTTTGGACATAGAGCAGGGTGGAAGCTGCAA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATCCTGACAGGGTCTACTaGTTCCTGAGCAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDPDRVY*FLSSVN
Trigger: ATTGACACTGCTCAGGAAGCAGTAGACCCTGTCAGG...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAACATGCAGCTGCTGGCTaGTGGCCAAGATTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKHAAAG*WPRFCV
Trigger: AACACAGAATCTTGGCCAGCAGCCAGCAGCTGCATG...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAGGAGGTATTCTGGATTaGTGCCTCCTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPGGILD*CLLSEP
Trigger: GGGTTCTGAGAGGAGGCAGCAATCCAGAATACCTCC...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACATCATTGCCCTGGTGTaGCAGCCAGTGGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYIIALV*QPVVGT
Trigger: TGTGCCTACCACTGGCTGGCACACCAGGGCAATGAT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGCAAGTGTGCTTGTTCTaGTGCTGCTTGGGTTACAAA +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKQVCLF*CCLGYK
Trigger: TTTGTAACCCAAGCAGCAGCAGAACAAGCACACTTG...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGAGTCTAGGAACCCTTTaGATCGGTCATGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKSLGTL*IGHASL
Trigger: CAAAGAAGCATGACCGATGCAAAGGGTTCCTAGACT...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGTCTGGTTGTTTTTGCTaGGCTGAGGTGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGSGCFC*AEVGVR
Trigger: CCTCACCCCCACCTCAGCGCAGCAAAAACAACCAGA...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAACTTCTGCTTGGCAATaGTCTCCATCTCCCTTATGT +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGTSAWQ*SPSPLC
Trigger: ACATAAGGGAGATGGAGAGCATTGCCAAGCAGAAGT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCATTTGAGCCTCATCTaGCCCCATCCGTGTATATTT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFHLSLI*PHPCIF
Trigger: AAATATACACGGATGGGGGCAGATGAGGCTCAAATG...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAGAGCATTCTCCAGATaGCTCGAATTACCACAATCA +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSRAFSR*LELPQS
Trigger: TGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCT...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTCCTGCTGTTTCTCTTaGCACCCCAATCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGSCCFS*HPNQDP
Trigger: AGGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCTCACTCAGCATGTTGTaGCTGCCAGTTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSSLSML*LPVFLS
Trigger: ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGA...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAAGTTGATACATAGGTaGAGGGAGCAATTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDKLIHR*REQLSV
Trigger: CACAGACAATTGCTCCCTCCACCTATGTATCAACTT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGAGGTAAAATGTAGGGACTTGTaGGGTCACTACTTCTACCAA +
Preference number: 4 (lower is better)
Translates to: LIGAGQEEAGCHWLPREVKCRDL*GHYFYQ
Trigger: TTGGTAGAAGTAGTGACCCCACAAGTCCCTACATTT...TACCTCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCGACAGTGTCTGTCTGTaGCTAGGAGAGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASDSVCL*LGEAAN
Trigger: GTTTGCAGCCTCTCCTAGCCACAGACAGACACTGTC...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACCTGGACCGAAACACTaGCCTTTCTCTGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPPGPKH*PFSERR
Trigger: TCTCCTCTCAGAGAAAGGCCAGTGTTTCGGTCCAGG...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACGTGACCAACAGTTCCTaGACTACAATGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDVTNSS*TTMKLI
Trigger: GATCAACTTCATTGTAGTCCAGGAACTGTTGGTCAC...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATGCAGCTGCTGGCTGCTaGCCAAGATTCTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDAAAGC*PRFCVF
Trigger: AAAAACACAGAATCTTGGCCAGCAGCCAGCAGCTGC...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAAGTTCAAGGGATGCTaGCTAGAAAAGGAGGTATTC +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDKFKGC*LEKEVF
Trigger: GAATACCTCCTTTTCTAGCCAGCATCCCTTGAACTT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCGTTGTAGGAGGCTGGTaGGCGAGGCCCCCACCAATG +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSVVGGW*ARPPPM
Trigger: CATTGGTGGGGGCCTCGCCCACCAGCCTCCTACAAC...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGAGAGGCAGGGCTTGCTaGATGGAGAAACCAGACCCA +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGRGRAC*MEKPDP
Trigger: TGGGTCTGGTTTCTCCATCCAGCAAGCCCTGCCTCT...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAACCTTACTACAACCAGTaGGGGTCAGAAAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLEPYYNQ*GSEREM
Trigger: CATTTCTCTTTCTGACCCCCACTGGTTGTAGTAAGG...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATCCTTACTACAACCAGTaGGGGTCAGAAAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHPYYNQ*GSEREM
Trigger: CATTTCTCTTTCTGACCCCCACTGGTTGTAGTAAGG...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAAGATTGGCACTCTGGTaGGTGCTGGGGCCCACACAT +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGRLALW*VLGPTH
Trigger: ATGTGTGGGCCCCAGCACCCACCAGAGTGCCAATCT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATGGGGGAAGACCAGATTaGCACTCTGGTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINGGRPD*HSGGCW
Trigger: CCAGCACCCACCAGAGTGCCAATCTGGTCTTCCCCC...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTTCAAAATCAGGGCCTaGCAGAGCCTAGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASFKIRA*QSLASP
Trigger: TGGCGAAGCTAGGCTCTGCCAGGCCCTGATTTTGAA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATCCCCTGAGAGTGGGGTaGGCAGGTTCAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINPLRVG*AGSAVR
Trigger: TCTCACAGCTGAACCTGCCCACCCCACTCTCAGGGG...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTATGGCCCTGCCCGAGCTaGCTTTCTCGGCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLWPCPS*LSRPGF
Trigger: GAACCCAGGCCGAGAAAGCCAGCTCGGGCAGGGCCA...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAAGGAGATGCCCATGCTaGCCCTGCCCGAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKRRCPC*PCPSWL
Trigger: AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCT...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp GAGCATGAGCCCAGATCCTTTAACATCTATCCTGTCTaGCTGCTTCAGTCCCTAAGGCTGGGTAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EHEPRSFNIYPV*LLQSLRLGRVR
Trigger: CCTCACCCTACCCAGCCTTAGGGACTGAAGCAGCAAGACAGGATAGATGTTAAAGGATCTGGGCTCATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp TCAGTTTACACCAGCACCTGTCCTCCAGGAACACCGTaGGCTAGATGTGTGCTTGTCCATCAGGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SVYTSTCPPGTP*ARCVLVHQVQR
Trigger: CCTTTGGACCTGATGGACAAGCACACATCTAGCCAACGGTGTTCCTGGAGGACAGGTGCTGGTGTAAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCATCTGCTTCAAGGTTTaGATCTGTTTTAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSICFKV*ICFSWW
Trigger: CCACCAGCTAAAACAGATTCAAACCTTGAAGCAGAT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR TCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATCAGTTCCTGAGAGGTaGAGAAGAATAGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPSVPER*RRIERL
Trigger: GAGGCGCTCTATTCTTCTTCACCTCTCAGGAACTGA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATCAGATCTGACTCAATaGGTTTATTCCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGSDLTQ*VYSVSP
Trigger: AGGAGACACGGAATAAACTCATTGAGTCAGATCTGA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATAAGGAAAGGAATAAATaGAGCCAGGGCCATTTGCGC +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDKERNK*SQGHLR
Trigger: GCGCAAATGGCCCTGGCTTCATTTATTCCTTTCCTT...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTTCCAGGCCTGGACATaGTATTTTAAAGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHFQAWT*YFKGWF
Trigger: AAACCAGCCTTTAAAATATCATGTCCAGGCCTGGAA...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTGCCCCCAGTACTTTTaGAAGGCACAAACAGATCTG +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDCPQYF*KAQTDL
Trigger: CAGATCTGTTTGTGCCTTTCAAAAGTACTGGGGGCA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATGGAAGGGTCATGTaGAGTGGCAGGGATGCAACA +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGHGRVM*SGRDAT
Trigger: TGTTGCATCCCTGCCACTTCACATGACCCTTCCATG...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCAAAAAGGAGACCTGCTaGTGCCAGTATCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGKKETC*CQYPER
Trigger: TCTCTCTGGATACTGGCATCAGCAGGTCTCCTTTTT...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAAGGGTCTACTGCTTCCTaGGCAGTGTCAATACCCATT +
Preference number: 4 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKGSTAS*AVSIPI
Trigger: AATGGGTATTGACACTGCTCAGGAAGCAGTAGACCC...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTCAGGGAGAGGCCGGTaGATACAGGGGCTGACGCTC +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCSGRGR*IQGLTL
Trigger: GAGCGTCAGCCCCTGTATTCACCGGCCTCTCCCTGA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGGGTGGGGGCAGCAAATaGTGTCCCTTTCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGGGGSK*CPFLSS
Trigger: TGAGGAAAGAAAGGGACAGCATTTGCTGCCCCCACC...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGGGCTCGAGTTGCCGCTaGCGCCTCTCTCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGGSSCR*RLSQSA
Trigger: AGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCC...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGCTCGAGTTGCCGCTaGCGCCTCTCTCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAGSSCR*RLSQSA
Trigger: AGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCC...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGTGTTGGGGCTCGAGTTaGCGCTGCCGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQCWGSS*RCRLSQ
Trigger: CTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACA...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGCAGAAGAGGCAGAGAAGGTATTTTGAGCTGGTGCTGGTATCTGCTCTGTGATTCCGGCCTCGGCAGCTaGTGCCAAAACTACCAACAC +
Preference number: 4 (lower is better)
Translates to: SRRGREGILSWCWYLLCDSGLGS*CQNYQH
Trigger: GTGTTGGTAGTTTTGGCAGCAGCTGCCGAGGCCGGA...ATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR GCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATCGCTTCCCTCCTAGGTaGTCCAGTTCCGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINRFPPR*SSSAIA
Trigger: AGCAATGGCGGAACTGGAGCACCTAGGAGGGAAGCG...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAACAACTGAGGTCAGGTaGTCTGTCCTAGCTTTTATA +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGTTEVR*SVLAFI
Trigger: TATAAAAGCTAGGACAGAGCACCTGACCTCAGTTGT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCCTCTCATTCCTCCTTaGACTGACTTCATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFPLIPP*TDFISH
Trigger: ATGAGAAATGAAGTCAGTGCAAGGAGGAATGAGAGG...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATGTCCAAAGGCTGCCTaGAACAAATTGCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGCPKAA*NKLLSI
Trigger: GATAGAAAGCAATTTGTTGCAGGCAGCCTTTGGACA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCCGAGGAAAATTTTCTTaGTGCTGTAAGGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSRGKFS*CCKAEF
Trigger: GAACTCTGCCTTACAGCAGCAAGAAAATTTTCCTCG...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGCGAGGAAAATTTTCTTaGTGCTGTAAGGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWERGKFS*CCKAEF
Trigger: GAACTCTGCCTTACAGCAGCAAGAAAATTTTCCTCG...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATGCCAGAGGCAGGGCTTaGTGGATGGAGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINARGRA*WMEKPD
Trigger: GTCTGGTTTCTCCATCCAGCAAGCCCTGCCTCTGGC...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGTGTGCTTGTTCTGCTaGTGCTTGGGTTACAAACAG +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGVCLFC*CLGYKQ
Trigger: CTGTTTGTAACCCAAGCAGCAGCAGAACAAGCACAC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCACATGTACAGCCCTTaGCCCCGGCCCTCTCATTCC +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSHMYSP*PRPSHS
Trigger: GGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCGCCCACCAGGAGCCCTaGCTTCGTCTCCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSAHQEP*LRLHRK
Trigger: CTTCCTATGGAGACGAAGGCAGGGCTCCTGGTGGGC...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGTCTAAGGACTTGATTTaGTGCTTTCTGAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSSKDLI*CFLKTL
Trigger: CAGGGTTTTCAGAAAGCAGCAAATCAAGTCCTTAGA...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGCCCATGCTGGCCCTaGCCGAGCTGGCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGCPCWP*PSWLSR
Trigger: CCGAGAAAGCCAGCTCGGGCAGGGCCAGCATGGGCA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCGTAAGAATCACTGGTTGTAGGATTACTACCTCCCGATTCCAACCTAGACTTCTTCTACACGGCTaGTCAGGGTGGCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VTVRITGCRITTSRFQPRLLLHG*SGWLGG
Trigger: CCCGCCTAGCCACCCTGACCAGCCGTGTAGAAGAAG...TCTAGGTTGGAATCGGGAGGTAGTAATCCTACAACCAGTGATTCTTACGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466273.6
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGTGGACTCCGAGAGTCTaGCCACCACTCGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQWTPRV*PPLGSG
Trigger: CCCTGACCCGAGTGGTGGCCAGACTCTCGGAGTCCA...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAAAGAGGAGCGATAGATaGAAGAGCCTCGGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPKRSDR*KSLGPL
Trigger: TAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCTT...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGATTGACAAAGGCTTCTaGCTTTTTATCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSIDKGF*LFICLL
Trigger: AAGGAGGCAGATAAAAAGCCAGAAGCCTTTGTCAAT...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCGAGATGAATTGCGATTaGCTGAAATGTAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSEMNCD*LKCRDL
Trigger: CAAGTCCCTACATTTCAGCCAATCGCAATTCATCTC...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR CCA 90 bp GAACCAATGGTAATGGGTGAGGTAGCAGGAGATGAATTGCGATTGGCTGAAATGGAGGCAGGTTGCCACTaGCTGCCCCGAGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: EPMVMGEVAGDELRLAEMEAGCH*LPREVD
Trigger: ATCTACCTCTCGGGGCAGCCAGTGGCAACCTGCCTC...CATTTCAGCCAATCGCAATTCATCTCCTGCTACCTCACCCATTACCATTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR CCA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGCATCTAATAAGCACATaGTTTGGGGAAGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKHLIST*FGEGKW
Trigger: CCATTTCCCTTCCCCAAACCATGTGCTTATTAGATG...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCTTGCTTCCTGAGTaGAACCATCTAATAAGCACA +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFSLLPE*NHLIST
Trigger: TGTGCTTATTAGATGGTTCCACTCAGGAAGCAAGGA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATGAGAAGGGGTGGCCTTaGAATACAGATGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDEKGWP*NTDVLT
Trigger: AGTCAGAACATCTGTATTCCAAGGCCACCCCTTCTC...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACTGTTCTATGCAATATaGTTGTGTGGACTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGLFYAI*LCGLWV
Trigger: AACCCAGAGTCCACACAACCATATTGCATAGAACAG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATAGGGGGCGGTGGTGGTaGTGGTTGGTATACCCAACT +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINRGRWW*WLVYPT
Trigger: AGTTGGGTATACCAACCACCACCACCACCGCCCCCT...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTTCACAAAGCAAGTCTaGCTGCTTCTCCCTAAACAA +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFFTKQV*LLLPKQ
Trigger: TTGTTTAGGGAGAAGCAGCCAGACTTGCTTTGTGAA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTGGGTTACAAACAGCTaGGTGACATCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASWVTNS*VTSGEK
Trigger: CTTCTCCCCTGATGTCACCCAGCTGTTTGTAACCCA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATGTTCTGCTGCTGCTTaGGTTACAAACAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQCSAAA*VTNSWV
Trigger: CACCCAGCTGTTTGTAACCCAAGCAGCAGCAGAACA...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAACCAGATTGGCACTCTaGTGGGTGCTGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKTRLAL*WVLGPT
Trigger: TGTGGGCCCCAGCACCCACCAGAGTGCCAATCTGGT...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATCCTCTCTCCTGGGGTTaGGGGAAGACCAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINPLSWG*GKTRLA
Trigger: TGCCAATCTGGTCTTCCCCCAACCCCAGGAGAGAGG...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGGGAGCAGTGTGCATaGGGCACCAGGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSWEQCA*GTRSSS
Trigger: GGAGGAACTCCTGGTGCCCCATGCACACTGCTCCCA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATTCTTCCTCCATTTCTaGCATTTTGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPFFLHF*HFALQG
Trigger: GCCTTGGAGCGCAAAATGTCAGAAATGGAGGAAGAA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAAGGAAAGGAATAAATaGAGCCAGGGCCATTTGCGC +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQKERNK*SQGHLR
Trigger: GCGCAAATGGCCCTGGCTTCATTTATTCCTTTCCTT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCTCTCATCAATGGGTTaGAAGTACTTCATTCCATTA +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDLSSMG*KYFIPL
Trigger: TAATGGAATGAAGTACTTTCAACCCATTGATGAGAG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGGCTATTTATTCAGCTTaGGCTGCCTGGGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGAIYSA*AAWGAH
Trigger: ATGAGCACCCCAGGCAGCTCAAGCTGAATAAATAGC...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAACAAAGTACATGGCTTTaGGAGTTTCTTCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLEQSTWL*EFLLPS
Trigger: TGATGGAAGAAGAAACTCTCAAAGCCATGTACTTTG...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAAAGCCGCCTGGAAGCTaGATAACTGGCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPKPPGS*ITGNTF
Trigger: AAAAGTGTTGCCAGTTATTCAGCTTCCAGGCGGCTT...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAAGCCGCCTGGAAGCTaGATAACTGGCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQKPPGS*ITGNTF
Trigger: AAAAGTGTTGCCAGTTATTCAGCTTCCAGGCGGCTT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCGGAATACAGATGTTCTaGCTTCTAGGGTCTTATCTT +
Preference number: 4 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFGIQMF*LLGSYL
Trigger: AAGATAAGACCCTAGAAGTCAGAACATCTGTATTCC...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACATGAGAAGTCAACCTTaGTGTGCTCATATTAAACAG +
Preference number: 4 (lower is better)
Translates to: PVNTGADALPSCILLQSDMRSQP*CAHIKQ
Trigger: CTGTTTAATATGAGCACATCAAGGTTGACTTCTCAT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCGAACTCATTTCTGTGTaGCAAAGCTTTGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSELISV*QSFVSV
Trigger: CACAGAAACAAAGCTTTGTCACACAGAAATGAGTTC...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCTCTCCCCAAGTCAGTaGCCAGGGATTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSLSPSQ*PGISAW
Trigger: CCAAGCGGAAATCCCTGGTCACTGACTTGGGGAGAG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATAGAATCTTCCCTCCCTaGCCTCTCCCCAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINRIFPP*PLPKSV
Trigger: CACTGACTTGGGGAGAGGTCAGGGAGGGAAGATTCT...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTAGTGGGAGCTGCCTGTaGGGGTCAGTATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCSGSCL*GSVWWV
Trigger: CACCCACCATACTGACCCTCACAGGCAGCTCCCACT...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCTCCTTATTAAAGAAATaGGCTGAAAGAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSSLLKK*AERNLG
Trigger: CCCCAGGTTTCTTTCAGCTCATTTCTTTAATAAGGA...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAGTCATCCTGTTGAACTaGGAGGGACAGGTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKVILLN*EGQVAP
Trigger: GGGGGCTACCTGTCCCTCTCAGTTCAACAGGATGAC...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGGGTGAATACAGGGGCTaGCGCTCTTCCCTCGTGCAT +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKGEYRG*RSSLVH
Trigger: ATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACC...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAAAATAAGAACCTTCTaGAGCCATTTGAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSKIRTF*SHLSLI
Trigger: GATGAGGCTCAAATGGCTTCAGAAGGTTCTTATTTT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAAGTCTTTTCTTGTTTCTaGTGGGCCACCTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKVFSCF*WATFSS
Trigger: GCTTGAGAAGGTGGCCCAGCAGAAACAAGAAAAGAC...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAGGTGGGGGCAGCAAATaGTGTCCCTTTCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGGGGSK*CPFLSS
Trigger: TGAGGAAAGAAAGGGACAGCATTTGCTGCCCCCACC...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTCCGGCCTCGGCAGCTaGTGCCAAAACTACCAACAC +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKSGLGS*CQNYQH
Trigger: GTGTTGGTAGTTTTGGCAGCAGCTGCCGAGGCCGGA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGTCTAGATCAACTCCTTaGTTCTTTACTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWESRSTP*FFTCSR
Trigger: TCTGGAGCAAGTAAAGAAGCAAGGAGTTGATCTAGA...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGAGGAGCGATAGATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATTGGCGCTGGTGCTGGTATCTaGTCTGTGATACTACTCTTG +
Preference number: 4 (lower is better)
Translates to: RGAIDGRASVPYRFPGIGAGAGI*SVILLL
Trigger: CAAGAGTAGTATCACAGAGCAGATACCAGCACCAGC...GCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTCACCCAGGCTGGAGTaGAGTGGCGTGATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSSPRLE*SGVIKA
Trigger: AGCCTTGATCACGCCACTGCACTCCAGCCTGGGTGA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCAAAGCAAGTCTGGCTaGTTCTCCCTAAACAACCCC +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGQSKSG*FSLNNP
Trigger: GGGGTTGTTTAGGGAGAAGCAGCCAGACTTGCTTTG...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGTGGGGAGTGTGGTGGTaGCGGGGAACATTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQWGVWW*RGTLSG
Trigger: CCCAGACAATGTTCCCCGGCACCACCACACTCCCCA...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCCACATGTACAGCCCTTaGCCCCGGCCCTCTCATTCC +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFHMYSP*PRPSHS
Trigger: GGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTG...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCGCCCACCAGGAGCCCTaGCTTCGTCTCCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFAHQEP*LRLHRK
Trigger: CTTCCTATGGAGACGAAGGCAGGGCTCCTGGTGGGC...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATTCTGCCCTGACTCCTaGCCATCTAAGGACTTGATT +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQFCPDS*PSKDLI
Trigger: AATCAAGTCCTTAGATGGGCAGGAGTCAGGGCAGAA...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAGCGGGAGTCGGTGCCTaGTCCAGTCCAGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQAGVGA*SSPALP
Trigger: AGGCAGGGCTGGACTGGAGCAGGCACCGACTCCCGC...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCCTTCTTCTACACGGCTaGTCAGGGTGGCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFLLLHG*SGWLGG
Trigger: CCCGCCTAGCCACCCTGACCAGCCGTGTAGAAGAAG...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAACACTAAATTACTGTTaGGGCTCGAGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VPWNWPPHSACCGCQFFSTLNYC*GSSCRC
Trigger: GCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGT...TGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp ATAGATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATTGGCCACCTCACTAAGAGGAGCGATAGATaGAAGAGCCTCGGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: IDGRASVPYRFPGIGHLTKRSDR*KSLGPL
Trigger: TAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCTT...AGTGAGGTGGCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCATCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp TTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGAAGAGGAGCGATAGATaGAAGAGCCTCGGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: FPGIGHLTQHVVAASFSQKRSDR*KSLGPL
Trigger: TAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCTT...CTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCGAGGCAGGTTGCCACTaGCTGCCCCGAGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSEAGCH*LPREVD
Trigger: ATCTACCTCTCGGGGCAGCCAGTGGCAACCTGCCTC...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR CCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAATACTCTGGAGCTATCTaGAAAAGGATCAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKYSGAI*KRISSP
Trigger: AGGGCTGCTGATCCTTTTCCAGATAGCTCCAGAGTA...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACACTGATAAGCTCCAGTaGAACCAGTGGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYTDKLQ*NQWLIW
Trigger: CCAGATGAGCCACTGGTTCCACTGGAGCTTATCAGT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAAGTGCGGTCAGTGCTaGCATAAACAATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASKCGQC*HKQWGL
Trigger: CAAACCCCATTGTTTATGCCAGCACTGACCGCACTT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGATCTTGGCTGATTCATaGAAAACCACCTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWEILADS*KTTSLK
Trigger: CTTTAGAGAGGTGGTTTTCCATGAATCAGCCAAGAT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAACTTCTACAGGAATCTTaGCTGATTCATGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLELLQES*LIHGKP
Trigger: TGGTTTTCCATGAATCAGCCAAGATTCCTGTAGAAG...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCAGAGTAAACCAGACATaGCTACTCATGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGRVNQT*LLMVSL
Trigger: CAAGGAGACCATGAGTAGCCATGTCTGGTTTACTCT...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCGAAAAGGAGGTATTCTaGATTGCTGCCTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASEKEVF*IAASSQ
Trigger: CTGAGAGGAGGCAGCAATCCAGAATACCTCCTTTTC...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCGGAGTTGTAGGAGGCTaGTGGGCGAGGCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSGVVGG*WARPPP
Trigger: TGGTGGGGGCCTCGCCCACCAGCCTCCTACAACTCC...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGCACTGTGGCTGTCCCTaGGGAAGGGGCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQHCGCP*GRGLYV
Trigger: CACATAGAGGCCCCTTCCCCAGGGACAGCCACAGTG...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTTTCAGCAGACGGACTaGGATTTATCACCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASFQQTD*DLSPEG
Trigger: ACCCTCAGGTGATAAATCCCAGTCCGTCTGCTGAAA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGAGATTGGCACTCTGGTaGGTGCTGGGGCCCACACAT +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKRLALW*VLGPTH
Trigger: ATGTGTGGGCCCCAGCACCCACCAGAGTGCCAATCT...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGACCAGATTGGCACTCTaGTGGGTGCTGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQTRLAL*WVLGPT
Trigger: TGTGGGCCCCAGCACCCACCAGAGTGCCAATCTGGT...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTGCTCCATCTCTACGCTaGGCGAGGAGCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCAPSLR*ARSRQQ
Trigger: CTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGAGC...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACTCCTGCTGGAGATTTaGCCTCCCTTGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLLLLEI*PPLAPP
Trigger: GGGAGGAGCCAAGGGAGGCCAAATCTCCAGCAGGAG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGAAGGGGGCCTCCTGCTaGAGATTTGGCCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQKGASC*RFGLPW
Trigger: CCAAGGGAGGCCAAATCTCCAGCAGGAGGCCCCCTT...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCACATGGGAGTCATCAGTaGGCGGGAGTCGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAHGSHQ*AGVGAC
Trigger: GCAGGCACCGACTCCCGCCCACTGATGACTCCCATG...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp TATCTTTGTTGTCCAGTAGAGCAGAAATCCGAGGGCTaGAAGAGGAGCGATAGATGGAAGAGCCTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: YLCCPVEQKSEG*KRSDRWKSLGP
Trigger: GGGACCGAGGCTCTTCCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCTGCTCTACTGGACAACAAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR CAA 72 bp CAGATATTTAGGCGAGAGTCAAGCTACTTCTGGCCCTaGCATGTCCCTTATTCAGGAATAGTGGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: QIFRRESSYFWP*HVPYSGIVGPD
Trigger: GTCGGGGCCCACTATTCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGCTTGACTCTCGCCTAAATATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGCCGACGGGCTCTTGCTaGAGCCCGGTCACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLPTGSC*SPVTVR
Trigger: TCTTACGGTGACCGGGCTTCAGCAAGAGCCCGTCGG...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGTTCTTCCTCCATTTCTaGCATTTTGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGFFLHF*HFALQG
Trigger: GCCTTGGAGCGCAAAATGTCAGAAATGGAGGAAGAA...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTAGAAATCCGAGGGCTTaGAGAGGAGCGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: IGSLELATSLSMLWLPVFRNPRA*RGAIDG
Trigger: TCCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCT...AAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR TCA 90 bp AGAGGAGCGATAGATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATTGGCCTTTCAGAGTTGGAATaGTTGACAAAGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RGAIDGRASVPYRFPGIGLSELE*LTKASG
Trigger: GCCAGAAGCCTTTGTCAATCATTCCAACTCTGAAAG...GCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR TCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGAGGATGGCCAAGATGTaGCAGGTAAGAAAAGCATGC +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGRMAKM*QVRKAC
Trigger: GCATGCTTTTCTTACCTGTCACATCTTGGCCATCCT...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACTGCCCCCAGTACTTTTaGAAGGCACAAACAGATCTG +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYCPQYF*KAQTDL
Trigger: CAGATCTGTTTGTGCCTTTCAAAAGTACTGGGGGCA...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGCCAGCAGGTGAGGACTaGGGATTGTGGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQPAGED*GLWPLK
Trigger: CTTCAGTGGCCACAATCCTCAGTCCTCACCTGCTGG...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTGCCTGGGGTGCTCATaGGTCTCCAAACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFCLGCS*VSKPAG
Trigger: ACCTGCTGGTTTGGAGACTCATGAGCACCCCAGGCA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAAGGCTGCCCCAGATGTaGGATTCTAGAAATCCCATG +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGRLPQM*DSRNPM
Trigger: CATGGGATTTCTAGAATCTCACATCTGGGGCAGCCT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAATCAATTCAACATCCTaGTGTTTCTCTTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQINSTS*CFSWHP
Trigger: GGGGTGCCAAGAGAAACAGCAGGATGTTGAATTGAT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAGCGCCGAAGCTGCTCTaGCCGCCGCATTCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAAPKLL*PPHSRR
Trigger: TCGGCGCGAATGCGGCGGGCAGAGCAGCTTCGGCGC...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACGCCAGCGCCGAAGCTaGTCTGCCCGCCGCATTCGC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFARQRRS*SARRIR
Trigger: GCGAATGCGGCGGGCAGAGCAGCTTCGGCGCTGGCG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACGCTCCGCAGGCTCCTaGTCTGTCAGCGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFARSAGS*SVSEPR
Trigger: GCGGGGCTCGCTGACAGAGCAGGAGCCTGCGGAGCG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAATCAATACATGCCTGGTaGAGGGCTGTCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKSIHAW*RAVKPS
Trigger: GGACGGCTTGACAGCCCTGCACCAGGCATGTATTGA...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCTGCCCACCTCAAGGGTaGCGACACTCACCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSCPPQG*RHSPVA
Trigger: GGCCACTGGTGAGTGTCGGCACCCTTGAGGTGGGCA...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATTAAAGTGCGGTCAGTaGTGGCATAAACAATGGGGT +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQLKCGQ*WHKQWG
Trigger: ACCCCATTGTTTATGCCAGCACTGACCGCACTTTAA...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAGTGTGTGCTTAAAGTaGGGTCAGTGCTGGCATAAA +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQSVCLK*GQCWHK
Trigger: TTTATGCCAGCACTGACCGCACTTTAAGCACACACT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCAAAAGTTCAAGGGATaGTGGCTAGAAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGQKFKG*WLEKEV
Trigger: TACCTCCTTTTCTAGCCAGCATCCCTTGAACTTTTG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATTCTTTCCTTCCTTCTaGAGGGAAATCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPFFPSF*REIIAL
Trigger: CAGGGCAATGATTTCCCTGCAGAAGGAAGGAAAGAA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCATGGGGGCAGTGAATaGAAGCAGGGATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSHGGSE*KQGWEL
Trigger: CAGCTCCCATCCCTGCTTGCATTCACTGCCCCCATG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACCGTTGGCTAGATGTGTaGTTGTCCATCAGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYRWLDV*LSIRSK
Trigger: TTTGGACCTGATGGACAAGCACACATCTAGCCAACG...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAACTTCTGCTTGGCAATaGTCTCCATCTCCCTTATGT +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQTSAWQ*SPSPLC
Trigger: ACATAAGGGAGATGGAGAGCATTGCCAAGCAGAAGT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGGAAGAGCCCAGGATaGCTCAGGCCTGGCAACTGT +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAGKSPG*LRPGNC
Trigger: ACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCC...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCATAAAGGGGGCCTCCTaGTGGAGATTTGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSIKGAS*WRFGLP
Trigger: AGGGAGGCCAAATCTCCAGCAGGAGGCCCCCTTTAT...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAACCCTGCCTTGGGAGATaGTGGAGGACCCTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQPCLGR*WRTLSP
Trigger: GGGCGACAGGGTCCTCCAGCATCTCCCAAGGCAGGG...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGAGGTAGATGAACCAATGGTATCTCTGCACCAAACTTaGGAGTTTCACATCTTGATG +
Preference number: 4 (lower is better)
Translates to: QEEAGCHWLPREVDEPMVSLHQT*EFHILM
Trigger: CATCAAGATGTGAAACTCGCAAGTTTGGTGCAGAGA...TACCATTGGTTCATCTACCTCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR CCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCACTTCTTCTACACGGCTaGTCAGGGTGGCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESALLLHG*SGWLGG
Trigger: CCCGCCTAGCCACCCTGACCAGCCGTGTAGAAGAAG...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGAGTTCTGTTAACACCTaGAGTAGTGGAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGSSVNT*SSGGGK
Trigger: CTTCCCTCCTCCACTACTCCAGGTGTTAACAGAACT...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR CCA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAACTGTCATAAAACTTaGGATAGGGGTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSNCHKT*DRGLEE
Trigger: TTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACCTCGAAGCGGACCCTaGGGCTCCCGCGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAPRSGP*GSRAWS
Trigger: TGACCAGGCGCGGGAGCCCCAGGGTCCGCTTCGAGG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CCA 90 bp TGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGTAGAGTCATCAATACATGCCTaGTGCAGGGCTGTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: WNSPIPSQTAPYLCCPVESSIHA*CRAVKP
Trigger: CGGCTTGACAGCCCTGCACCAGGCATGTATTGATGA...CTCTACTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp GGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATCACTCAGCATGTTGTaGCTGCCAGTTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GHLTQHVVAASFSQSQSPSLSML*LPVFLS
Trigger: ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGA...TGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAATGACTTCCCACAATaGCCAAAGACAACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQNDFPQ*PKTTEV
Trigger: GACCTCAGTTGTCTTTGGCCATTGTGGGAAGTCATT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAGGAAGTGAGGCAGAATaGAGTATTCAGAGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQGSEAE*SIQSPN
Trigger: ATTTGGGCTCTGAATACTCCATTCTGCCTCACTTCC...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGACATGACTCTCATCAATaGGTTGAAAGTACTTCATTC +
Preference number: 4 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGHDSHQ*VESTSF
Trigger: GAATGAAGTACTTTCAACCCATTGATGAGAGTCATG...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGCCACTGCACCTGGTaGAATTGGGATCTTGAATTA +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASSHCTW*NWDLEL
Trigger: TAATTCAAGATCCCAATTCCACCAGGTGCAGTGGCT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGTACTCTGGAGCTATCTaGAAAAGGATCAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGYSGAI*KRISSP
Trigger: AGGGCTGCTGATCCTTTTCCAGATAGCTCCAGAGTA...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAAAGCTGCCTGCTTATTaGGTTGGAAGAACTCACATC +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPKLPAY*VGRTHI
Trigger: GATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTT...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTGGTTGTGTGGACTCTaGGTTTGTAAACACTGCTTT +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDWLCGL*VCKHCF
Trigger: AAAGCAGTGTTTACAAACCCAGAGTCCACACAACCA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATGTGACCAACAGTTCCTaGACTACAATGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDVTNSS*TTMKLI
Trigger: GATCAACTTCATTGTAGTCCAGGAACTGTTGGTCAC...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGGGCTTCCGGGACACTaGGTTGTAAGCCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQGLPGH*VVSQTW
Trigger: CCAGGTTTGGCTTACAACCCAGTGTCCCGGAAGCCC...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGGAATAGGGGGCGGTaGTGGTGGTGGTTGGTATAC +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSWNRGR*WWWLVY
Trigger: GTATACCAACCACCACCACCACCGCCCCCTATTCCA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCGTTGTAGGAGGCTGGTaGGCGAGGCCCCCACCAATG +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSVVGGW*ARPPPM
Trigger: CATTGGTGGGGGCCTCGCCCACCAGCCTCCTACAAC...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGCACTGTGGCTGTCCCTaGGGAAGGGGCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGHCGCP*GRGLYV
Trigger: CACATAGAGGCCCCTTCCCCAGGGACAGCCACAGTG...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCGCCTGGGGTCAGACCTaGCCACCCACGTACAAACCC +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSAWGQT*PPTYKP
Trigger: GGGTTTGTACGTGGGTGGCCAGGTCTGACCCCAGGC...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTACCAGACCCAGATCCTaGCTGCCTGGGGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCTRPRS*LPGVRP
Trigger: AGGTCTGACCCCAGGCAGCCAGGATCTGGGTCTGGT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTCTGGATACCTTTCCTaGGGTCCCTGTGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKSGYLS*GPCGGN
Trigger: GTTGCCTCCACAGGGACCCCAGGAAAGGTATCCAGA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp ATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTaGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: IGSLELATSLSM*WLPVFLSPNLH
Trigger: ATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR CAA 72 bp TTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTaGTCCAGTAGAGCAGAAATCCGAGGGCTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FPHTLPNCTLSL*SSRAEIRGLEE
Trigger: CTCTTCAAGCCCTCGGATTTCTGCTCTACTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR CAA 72 bp GAAGAACTCACATCTTATGAAGGGTTAGACCCTGCCTaGAAAATCAGTATGGTAGGCTGGGCGTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: EELTSYEGLDPA*KISMVGWAWAL
Trigger: AAGGGCCCACGCCCAGCCTACCATACTGATTTTCAAGGCAGGGTCTAACCCTTCATAAGATGTGAGTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp CCTTCTTCGGTTCCCACTTCCACCTGTCTCCTCTCCTaGAGGATAGACCAGCAGCTACCATTTTTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: PSSVPTSTCLLS*RIDQQLPFLSV
Trigger: AACTGACAAAAATGGTAGCTGCTGGTCTATCCTCAAGGAGAGGAGACAGGTGGAAGTGGGAACCGAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCCGACGGGCTCTTGCTaGAGCCCGGTCACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFPTGSC*SPVTVR
Trigger: TCTTACGGTGACCGGGCTTCAGCAAGAGCCCGTCGG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCACCTGAATTAAAAGTCTaGGGACTTCAGAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: VPWNWPPHSACCGCQFFSPELKV*GLQSSP
Trigger: AGGGCTACTCTGAAGTCCTCAGACTTTTAATTCAGG...TGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR TCA 90 bp AGCAGAAGAGGCAGAGAAGGTATTTTGAGCTGGTGCTGGTATCTGCTCTGTGATAGAAATCCGAGGGCTTaGAGAGGAGCGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: SRRGREGILSWCWYLLCDRNPRA*RGAIDG
Trigger: TCCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCT...ATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR TCA 90 bp AGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCTGGTATCTGCTCTGTaGTACTACTCTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RFPGIGHLTQHVVAASFSLVSAL*YYSCFQ
Trigger: CTGAAAGCAAGAGTAGTATCACAGAGCAGATACCAG...AGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR TCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAAGGATGGCCAAGATGTaGCAGGTAAGAAAAGCATGC +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGRMAKM*QVRKAC
Trigger: GCATGCTTTTCTTACCTGTCACATCTTGGCCATCCT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAAACCACTCTAAACACTaGATATCACTGGCAACCCTA +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPNHSKH*ISLATL
Trigger: TAGGGTTGCCAGTGATATTCAGTGTTTAGAGTGGTT...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAACCACTCTAAACACTaGATATCACTGGCAACCCTA +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQNHSKH*ISLATL
Trigger: TAGGGTTGCCAGTGATATTCAGTGTTTAGAGTGGTT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAGCATTCCCTGAGAACTaGACTTACAGTACTCCCATG +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGAFPEN*TYSTPM
Trigger: CATGGGAGTACTGTAAGTTCAGTTCTCAGGGAATGC...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGCCTGGGGTGCTCATaGGTCTCCAAACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGCLGCS*VSKPAG
Trigger: ACCTGCTGGTTTGGAGACTCATGAGCACCCCAGGCA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAATGCTCAGCTGGAGCCTaGGGGATGAAGTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKCSAGA*GMKSPV
Trigger: CACTGGTGACTTCATCCCTCAGGCTCCAGCTGAGCA...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGCCCACACATCTCCTaGGAACACATGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAGPHIS*EHMPGC
Trigger: ACAGCCTGGCATGTGTTCTCAGGAGATGTGTGGGCC...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGCTCACCTCTGTAGTGTaGGGGTCTGTGGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQLTSVV*GSVGGD
Trigger: ATCACCACCCACAGACCCTCACACTACAGAGGTGAG...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGCCCACAGACCACTTCTaGAGGGCTCACCTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQPTDHF*RAHLLS
Trigger: TGACAACAGGTGAGCCCTTCAGAAGTGGTCTGTGGG...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCCTATCAATACATGCCTGGTaGAGGGCTGTCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: DSSLGSSGLLKRPEENLLSIHAW*RAVKPS
Trigger: GGACGGCTTGACAGCCCTGCACCAGGCATGTATTGA...TAGGAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR GCA 90 bp TTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGCATACCCTCCCAAACTaGACCTTATCTTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: FPGIGHLTQHVVAASFSQHTLPN*TLSLLS
Trigger: GGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATG...CTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCGCCATGATGTACAGATaGAGTAGTGTTTGCACTGAT +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASAMMYR*SSVCTD
Trigger: ATCAGTGCAAACACTACTGCATCTGTACATCATGGC...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGGGAGCAGGCAGTGGTaGTGCCACCAAGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFGSRQW*CHQGTR
Trigger: TCTGGTGCCTTGGTGGCAGCACCACTGCCTGCTCCC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAGTCCTCAAAGCTGCCTaGTTATTGGGTTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGVLKAA*LLGWKN
Trigger: GTTCTTCCAACCCAATAAGCAGGCAGCTTTGAGGAC...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGAAAAACGATTAGTCTaGTATTTGGGTGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGEKRLV*YLGVKS
Trigger: GCTCTTCACACCCAAATAGCAGACTAATCGTTTTTC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGGAAAATTTTCTTGCTaGTGTAAGGCAGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGGKFSC*CKAEFK
Trigger: CTTGAACTCTGCCTTACAGCAGCAAGAAAATTTTCC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTGGGTTTGTAAACACTaGTTTGGTAGTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASWVCKH*FGSLLF
Trigger: GAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAACCAAGTGCTGTTCTATaGAATATGGTTGTGTGGACT +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQPSAVL*NMVVWT
Trigger: AGTCCACACAACCATATTGCATAGAACAGCACTTGG...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGCATGCAGCTGCTGGCTaGTGGCCAAGATTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKHAAAG*WPRFCV
Trigger: AACACAGAATCTTGGCCAGCAGCCAGCAGCTGCATG...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGATGCATCTTTCACCATaGAGCTGCTGGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQMHLSP*SCWLLA
Trigger: GGCCAGCAGCCAGCAGCTGCATGGTGAAAGATGCAT...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTATCTGGTTGTTTTTGCTaGGCTGAGGTGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLSGCFC*AEVGVR
Trigger: CCTCACCCCCACCTCAGCGCAGCAAAAACAACCAGA...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTCTAAGGACTTGATTTaGTGCTTTCTGAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDSKDLI*CFLKTL
Trigger: CAGGGTTTTCAGAAAGCAGCAAATCAAGTCCTTAGA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCCCTCGTGCATCCTCCTaGAGTCTGACAGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSPRASS*SLTESS
Trigger: GCTGCTTTCTGTCAGACTGCAGGAGGATGCACGAGG...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTGTTTGCTGCACATCTaGCTGCAGAGCCAAACCTCA +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINCLLHI*LQSQTS
Trigger: TGAGGTTTGGCTCTGCAGGCAGATGTGCAGCAAACA...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCTTGGGATAGGGGTTTaGAAGAACAGGGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGLGIGV*KNRALK
Trigger: TTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAG...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCATCTTTGGGCTCTTCTaGCTTGTTAAAAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASIFGLF*LVKKAR
Trigger: TCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGAT...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCACTCAGCATGTTGTaGCTGCCAGTTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FPGIGHLTQHVVAASFSQSLSML*LPVFLS
Trigger: ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGA...CTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTGCGCCTTGGAGAAATaGCTAGGTATGAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINCALEK*LGMREE
Trigger: TTCCTCCCTCATACCTAGCCATTTCTCCAAGGCGCA...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTCACAATGTTGCAAGTaGCCTCAGATACTTGACTTT +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDSQCCK*PQILDF
Trigger: AAAGTCAAGTATCTGAGGCCACTTGCAACATTGTGA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAAGTCAGCTTTAACATaGAAGGGTCATGTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQKSALT*KGHVKW
Trigger: CCACTTCACATGACCCTTCCATGTTAAAGCTGACTT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATTACACACACTTTCGTaGGATCCACAGACCATTAAC +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPLHTLS*DPQTIN
Trigger: GTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATTACACACACTTTCGTaGGATCCACAGACCATTAAC +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQLHTLS*DPQTIN
Trigger: GTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAA...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTCCTTTTTGCACCTTTaGAGGTGCAAAGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSSFLHL*RCKAAW
Trigger: CCAGGCGGCTTTGCACCTCCAAAGGTGCAAAAAGGA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTGCTGGCATAAACAATaGGGTTTGAGGGCCCCTGAT +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINCWHKQ*GLRAPD
Trigger: ATCAGGGGCCCTCAAACCCCATTGTTTATGCCAGCA...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAAAGCTGAGGAAAGGTaGTTGAGGAAACCTATGAAG +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQKAEER*LRKPMK
Trigger: CTTCATAGGTTTCCTCAACCACCTTTCCTCAGCTTT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTATCACCATGCAGCTGCTaGCTGCTGGCCAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLSPCSC*LLAKIL
Trigger: CAGAATCTTGGCCAGCAGCCAGCAGCTGCATGGTGA...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATCCGACTCTCAACTCTaGTTTTGGGAGAACATTAGA +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPSDSQL*FWENIR
Trigger: TCTAATGTTCTCCCAAAACCAGAGTTGAGAGTCGGA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTCCGACTCTCAACTCTaGTTTTGGGAGAACATTAGA +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASSDSQL*FWENIR
Trigger: TCTAATGTTCTCCCAAAACCAGAGTTGAGAGTCGGA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTTCACAAAGCAAGTCTaGCTGCTTCTCCCTAAACAA +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASFTKQV*LLLPKQ
Trigger: TTGTTTAGGGAGAAGCAGCCAGACTTGCTTTGTGAA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTGGTTACTTGAAGCTTaGAACCTTGATATCTATCTA +
Preference number: 4 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHWLLEA*NLDIYL
Trigger: TAGATAGATATCAAGGTTCCAAGCTTCAAGTAACCA...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGACCAGACCCAGATCCTaGCTGCCTGGGGTCAGACCT +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLTRPRS*LPGVRP
Trigger: AGGTCTGACCCCAGGCAGCCAGGATCTGGGTCTGGT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTTCCTGGGGTCCCTGTaGAGGCAACCAGGATTTTCA +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSFLGSL*RQPGFS
Trigger: TGAAAATCCTGGTTGCCTCCACAGGGACCCCAGGAA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGGGACTCCATGGTTCTaGATACCTTTCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQGTPWF*IPFLGS
Trigger: GGACCCCAGGAAAGGTATCCAGAACCATGGAGTCCC...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAAGGAGCAGACAGCAGTaGGACTCCATGGTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKRSRQQ*DSMVLD
Trigger: ATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCT...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGCTGGCTTTCTCGGCCTaGGTTCACAGTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQLAFSA*VHSSAP
Trigger: TGGAGCTGAACTGTGAACCCAGGCCGAGAAAGCCAG...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTCCAGGGCTTCCGGTaGGGTCTCAGGAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFVQGFR*GLRRCP
Trigger: TGGGCATCTCCTGAGACCCCACCGGAAGCCCTGGAC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGAAGGGGGCCTCCTGCTaGAGATTTGGCCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLKGASC*RFGLPW
Trigger: CCAAGGGAGGCCAAATCTCCAGCAGGAGGCCCCCTT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp AGAAGAATAGAGCGCCTCAATGCAGTCACTGTCACCTaGGATGCTAACCATTCCAGAGGGCATCTGATGATC +
Preference number: 4 (lower is better)
Translates to: RRIERLNAVTVT*DANHSRGHLMI
Trigger: GATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTATTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
3UTR CAA 72 bp GAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTaGTTGTCCAGTAGAGCAGAAATCCGAGGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: EFPHTLPNCTLS*LSSRAEIRGLE
Trigger: TTCAAGCCCTCGGATTTCTGCTCTACTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
3UTR CAA 72 bp AACCCTTTGCATCGGTCATGCTTCTTTGCCTCTGTTTaGTGCCCCAGGACAGGACTGAATTCTTCAACCATG +
Preference number: 4 (lower is better)
Translates to: NPLHRSCFFASV*CPRTGLNSSTM
Trigger: CATGGTTGAAGAATTCAGTCCTGTCCTGGGGCACAAAACAGAGGCAAAGAAGCATGACCGATGCAAAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATGTGGCCTCAGATACTTaGCTTTCGCCATATGTGTCT +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINVASDT*LSPYVS
Trigger: AGACACATATGGCGAAAGTCAAGTATCTGAGGCCAC...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGACACTGGCCTTTCTCTaGGAGGAGACAGTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQTLAFL*EETVSV
Trigger: GACAGACACTGTCTCCTCTCAGAGAAAGGCCAGTGT...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAATCCAAAATAAGCAGATaGATTGGGGAACAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKSKISR*IGEQLK
Trigger: TTTGAGCTGTTCCCCAATTCATCTGCTTATTTTGGA...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGCACGTGACGGCTAGGTaGTACTGTATCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQHVTAR*YCICRP
Trigger: AGGTCTGCAGATACAGTATCACCTAGCCGTCACGTG...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTACAAAGTCCTCAGTTaGCTCTTTGCAAATAACTTG +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDYKVLS*LFANNL
Trigger: CAAGTTATTTGCAAAGAGTCAACTGAGGACTTTGTA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTTGTTTTTGCTGCGCTaGGGTGGGGGTGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLLFLLR*GGGEGV
Trigger: CACTCCCTCACCCCCACCTCAGCGCAGCAAAAACAA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGAGAGCATCTGTCTGGTaGGGTGATGGGAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGRASVW*GDGSSV
Trigger: CACACTGCTCCCATCACCTCACCAGACAGATGCTCT...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCTTTGTGCTGGGAACTaGAAGAGTGGGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSLCAGN*KSGEGG
Trigger: TCCACCTTCCCCACTCTTTCAGTTCCCAGCACAAAG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGCTCAGTCCCGTGTCATaGGAATGGACGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLLSPVS*EWTVSR
Trigger: CCTGGACACCGTCCATTCTCATGACACGGGACTGAG...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATTTTACAGAACTGGTTaGGGCTGCTCCTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQFYRTG*GCSFDF
Trigger: AAAATCAAAGGAGCAGCCTCAACCAGTTCTGTAAAA...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCCATTTCTGACATTTTaGGCTCCAAGGCTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSPFLTF*APRLAS
Trigger: AGAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTGGTGGGGGCAGCAAATaGTGTCCCTTTCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCGGGSK*CPFLSS
Trigger: TGAGGAAAGAAAGGGACAGCATTTGCTGCCCCCACC...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATAATAGAGCGCCTCAATaGAGTCACTGTCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINNRAPQ*SHCHLG
Trigger: TCCAAGGTGACAGTGACTGCATTGAGGCGCTCTATT...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAGGCTCGAGTTGCCGCTaGCGCCTCTCTCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAGSSCR*RLSQSA
Trigger: AGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCC...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACTCCAGTTCCGCCATTaGTCCGGCCTCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFALQFRH*SGLGSC
Trigger: GCAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp TGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGCATACCCTCCCAAACTaGACCTTATCTTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CLGIPPYPPKLHLIFVVQHTLPN*TLSLLS
Trigger: GGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATG...CTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTCTTTGTCACAATGTTaGAAGTGGCCTCAGATACTT +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASSLSQC*KWPQIL
Trigger: AAGTATCTGAGGCCACTTGCAACATTGTGACAAAGA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACTTTTGTCCTCAAAGCTaGCTGCTTATTGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYFCPQS*LLIGLE
Trigger: TTCCAACCCAATAAGCAGGCAGCTTTGAGGACAAAA...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAATGCATCTTTCACCATaGAGCTGCTGGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAMHLSP*SCWLLA
Trigger: GGCCAGCAGCCAGCAGCTGCATGGTGAAAGATGCAT...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTATCATTGCCCTGGTGTaGCAGCCAGTGGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCIIALV*QPVVGT
Trigger: TGTGCCTACCACTGGCTGGCACACCAGGGCAATGAT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTGCTTGTTCTGCTGCTaGTTGGGTTACAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINCLFCC*LGYKQL
Trigger: CAGCTGTTTGTAACCCAAGCAGCAGCAGAACAAGCA...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCCTGAGAACACATaGCAGGCTGTGGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFSPENT*QAVELW
Trigger: CCACAGTTCCACAGCCTGGCATGTGTTCTCAGGAGA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCGAGGCAGGCTTGCCCTaGACAAACCACAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSEAGLP*TNHNRS
Trigger: ACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTC...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCGTTGTCACTCCCTCCTaGTCCCTCAGTCCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSVVTPS*SLSPVS
Trigger: TGACACGGGACTGAGGGAGCAGGAGGGAGTGACAAC...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTGTATGTGTGTGGTGTaGCCCTTCCTCCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKCMCVV*PFLPLF
Trigger: AAACAGTGGGAGGAAGGGGCACACCACACACATACA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGTATGTGTGTGGTGTaGCCCTTCCTCCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSCMCVV*PFLPLF
Trigger: AAACAGTGGGAGGAAGGGGCACACCACACACATACA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTGCTGCACATCTGCCTaGAGAGCCAAACCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLCCTSA*RAKPQG
Trigger: GCCCTGAGGTTTGGCTCTGCAGGCAGATGTGCAGCA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCCATTTCTTTTGGTTaGAAGGCAAGGACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQSISFG*KARTGK
Trigger: TTTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGA...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATCCATTTCTTTTGGTTaGAAGGCAAGGACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPSISFG*KARTGK
Trigger: TTTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTATCATCAATACATGCCTaGTGCAGGGCTGTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLSSIHA*CRAVKP
Trigger: CGGCTTGACAGCCCTGCACCAGGCATGTATTGATGA...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGATCTTTGGGCTCTTCTaGCTTGTTAAAAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGIFGLF*LVKKAR
Trigger: TCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGAT...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAATTGACAAAGGCTTCTaGCTTTTTATCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPIDKGF*LFICLL
Trigger: AAGGAGGCAGATAAAAAGCCAGAAGCCTTTGTCAAT...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGAGGAGCGATAGATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATTGGCATTGACAAAGGCTTCTaGCTTTTTATCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RGAIDGRASVPYRFPGIGIDKGF*LFICLL
Trigger: AAGGAGGCAGATAAAAAGCCAGAAGCCTTTGTCAAT...GCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGCCTGCTTATTGGGTTaGAAGAACTCACATCTTATG +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYACLLG*KNSHLM
Trigger: CATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGC...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGAGGGGGCGGTGGTGGTaGTGGTTGGTATACCCAACT +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLRGRWW*WLVYPT
Trigger: AGTTGGGTATACCAACCACCACCACCACCGCCCCCT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCATGGAATAGGGGGCGGTaGTGGTGGTGGTTGGTATAC +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAWNRGR*WWWLVY
Trigger: GTATACCAACCACCACCACCACCGCCCCCTATTCCA...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTCCTTGCTCTTTGAATaGGCTGAGCTGTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSSLLFE*AELLPP
Trigger: TGGTGGCAACAGCTCAGCCCATTCAAAGAGCAAGGA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCAGGTGTATTTACAGTaGACTGAAGTTAATCCATAC +
Preference number: 4 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGQVYLQ*TEVNPY
Trigger: GTATGGATTAACTTCAGTCCACTGTAAATACACCTG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGCTGTGGGGAGTGTGGTaGTGCCGGGGAACATTGTCT +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLLWGVW*CRGTLS
Trigger: AGACAATGTTCCCCGGCACCACCACACTCCCCACAG...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGATGGTCCTGAGGCTCTaGCTTCTAACCCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKMVLRL*LLTQNL
Trigger: GAGATTCTGGGTTAGAAGCCAGAGCCTCAGGACCAT...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGAAAGAGTGGGGAAGGTaGAGGGGACCATTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQKEWGR*RGPFQS
Trigger: GCTCTGAAATGGTCCCCTCCACCTTCCCCACTCTTT...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAATGGGAACTGAAAGAGTaGGGAAGGTGGAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKWELKE*GRWRGP
Trigger: TGGTCCCCTCCACCTTCCCCACTCTTTCAGTTCCCA...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACAGGGACCTTTGTGCTaGGAACTGAAAGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLQGPLC*ELKEWG
Trigger: TCCCCACTCTTTCAGTTCCCAGCACAAAGGTCCCTG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGCTGGCTTTCTCGGCCTaGGTTCACAGTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGLAFSA*VHSSAP
Trigger: TGGAGCTGAACTGTGAACCCAGGCCGAGAAAGCCAG...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATACATGGGAGTCATCAGTaGGCGGGAGTCGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIHGSHQ*AGVGAC
Trigger: GCAGGCACCGACTCCCGCCCACTGATGACTCCCATG...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCTCAGTTCCTGAGAGGTaGAGAAGAATAGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSSVPER*RRIERL
Trigger: GAGGCGCTCTATTCTTCTTCACCTCTCAGGAACTGA...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATGGGAGACGAAAACAATaGGCTGACACTTATGCCATA +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINGRRKQ*ADTYAI
Trigger: TATGGCATAAGTGTCAGCTCATTGTTTTCGTCTCCC...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAGTGGAATTGGGATCTTaGATTACAGCTTCTAGTTTA +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQVELGS*ITASSL
Trigger: TAAACTAGAAGCTGTAATTCAAGATCCCAATTCCAC...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAGTAGCAGCTTCTCTTaGAAAATGGTTGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQSSSFS*KMVGNE
Trigger: TTCATTTCCAACCATTTTTCAAGAGAAGCTGCTACT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAACATGGAAGGGTCATGTaGAGTGGCAGGGATGCAACA +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKHGRVM*SGRDAT
Trigger: TGTTGCATCCCTGCCACTTCACATGACCCTTCCATG...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGGAACTCATTTCTGTGTaGCAAAGCTTTGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGELISV*QSFVSV
Trigger: CACAGAAACAAAGCTTTGTCACACAGAAATGAGTTC...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAGACATAAGAGCATCCTaGTGTCACCTTAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLDIRAS*CHLKGP
Trigger: TGGCCCCTTAAGGTGACATCAGGATGCTCTTATGTC...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCGTCAAACCTCATCTCTaGGGGGACATTAGCATAGCC +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSVKPHL*GDISIA
Trigger: GGCTATGCTAATGTCCCCTCAGAGATGAGGTTTGAC...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTGTCAAACCTCATCTCTaGGGGGACATTAGCATAGCC +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSVKPHL*GDISIA
Trigger: GGCTATGCTAATGTCCCCTCAGAGATGAGGTTTGAC...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTGTGAACCACTCAACTaGGCACAGGCTGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCCEPLN*AQAVAS
Trigger: AGAAGCTACAGCCTGTGCTCAGTTGAGTGGTTCACA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGGTTACATCTGGTGTGTaGACCTTGGTGGAACTAGGG +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQVTSGV*TLVELG
Trigger: CCCTAGTTCCACCAAGGTTCACACACCAGATGTAAC...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGGCTTCTCCTTGGCCTaGCTCCATTTAGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQGFSLA*LHLGNS
Trigger: GGAATTTCCTAAATGGAGTCAGGCCAAGGAGAAGCC...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGAGAATCTTCCCTCCCTaGCCTCTCCCCAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLRIFPP*PLPKSV
Trigger: CACTGACTTGGGGAGAGGTCAGGGAGGGAAGATTCT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGCTCACCTCTGTAGTGTaGGGGTCTGTGGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLLTSVV*GSVGGD
Trigger: ATCACCACCCACAGACCCTCACACTACAGAGGTGAG...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCTTTCCTCATAAATCTGGAGCCTAGCCTACTTGGACAGTTTGCTGATGACTCTCCATTTCTGACATTTTaGGCTCCAAGGCTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SFLINLEPSLLGQFADDSPFLTF*APRLAS
Trigger: AGAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGG...AGAGTCATCAGCAAACTGTCCAAGTAGGCTAGGCTCCAGATTTATGAGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR GCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTCCATTTCTGACATTTTaGGCTCCAAGGCTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCPFLTF*APRLAS
Trigger: AGAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGG...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATGTTGGGGCTCGAGTTaGCGCTGCCGCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFACWGSS*RCRLSQ
Trigger: CTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp TCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTTCTAGATCAACTCCTTaGTTCTTTACTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLELATSLSMLWLPVFLSSRSTP*FFTCSR
Trigger: TCTGGAGCAAGTAAAGAAGCAAGGAGTTGATCTAGA...ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356764.6
CDS-3UTR GCA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCCAGGTAAGAAAAGCATaGCATATGAGGAATGACTTA +
Preference number: 4 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASQVRKA*HMRNDL
Trigger: TAAGTCATTCCTCATATGGCATGCTTTTCTTACCTG...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAGGATACCAGGGCTCCTaGAGTGTTACTTCACTGATA +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKGYQGS*SVTSLI
Trigger: TATCAGTGAAGTAACACTGCAGGAGCCCTGGTATCC...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGGGATACCAGGGCTCCTaGAGTGTTACTTCACTGATA +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKGYQGS*SVTSLI
Trigger: TATCAGTGAAGTAACACTGCAGGAGCCCTGGTATCC...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCTGCCTGCAACAAATTaGTTTCTATCCATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGLPATN*FLSISP
Trigger: TGGAGAAATGGATAGAAAGCAATTTGTTGCAGGCAG...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCTTGTGAAAGCCAAGTaGTGTTCTATGCAATATGGT +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGLVKAK*CSMQYG
Trigger: ACCATATTGCATAGAACAGCACTTGGCTTTCACAAG...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTTCCTTCCCAGTACTTaGAGCTTCCACCCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFFLPST*SFHPAL
Trigger: TAGAGCAGGGTGGAAGCTGCAAGTACTGGGAAGGAA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCCTGACAGGGTCTACTaGTTCCTGAGCAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSPDRVY*FLSSVN
Trigger: ATTGACACTGCTCAGGAAGCAGTAGACCCTGTCAGG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCCCTGGGTTCTATGTTTaGCCTCAACCCCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSPGFYV*PQPQLS
Trigger: TGAGAGTTGGGGTTGAGGGCAAACATAGAACCCAGG...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGGCTACTTCTGGCCCTTaGATGTCCCTTATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKATSGP*MSLIQE
Trigger: TTCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGC...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACCTTCTCCAAGAAGGATaGAAGGGTGAAACATTCTTT +
Preference number: 4 (lower is better)
Translates to: KPDMATHGLLGQAMEESYLLQEG*KGETFF
Trigger: AAAGAATGTTTCACCCTTGCATCCTTCTTGGAGAAG...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGCCAGAGGCAGGGCTTaGTGGATGGAGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFARGRA*WMEKPD
Trigger: GTCTGGTTTCTCCATCCAGCAAGCCCTGCCTCTGGC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTTGTTCTGCTGCTaGTTGGGTTACAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSCLFCC*LGYKQL
Trigger: CAGCTGTTTGTAACCCAAGCAGCAGCAGAACAAGCA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTCGGTCATGCTTCTTTaGCTCTGTTTTGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCSVMLL*LCFVPQ
Trigger: CTGGGGCACAAAACAGAGGCAAAGAAGCATGACCGA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCAACCACAACAGAAGTTaGACACAGAAGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSNHNRS*TQKSQG
Trigger: TCCCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTT...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAAACCACAACAGAAGTTaGACACAGAAGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKNHNRS*TQKSQG
Trigger: TCCCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTT...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTGAGGCAGGCTTGCCCTaGACAAACCACAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCEAGLP*TNHNRS
Trigger: ACTTCTGTTGTGGTTTGTGCAGGGCAAGCCTGCCTC...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGCCTCGTGCATCCTCCTaGAGTCTGACAGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLPRASS*SLTESS
Trigger: GCTGCTTTCTGTCAGACTGCAGGAGGATGCACGAGG...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAATCAGGATCCTGGAGTaGCTACCACAAGACTCACCT +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLIRILE*LPQDSP
Trigger: AGGTGAGTCTTGTGGTAGCCACTCCAGGATCCTGAT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGATCAGGATCCTGGAGTaGCTACCACAAGACTCACCT +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQIRILE*LPQDSP
Trigger: AGGTGAGTCTTGTGGTAGCCACTCCAGGATCCTGAT...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCATACACTAAATTACTGTTaGGGCTCGAGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CCGCQFFSVPISMKKEIHTLNYC*GSSCRC
Trigger: GCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGT...ATGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCACACTAAATTACTGTTaGGGCTCGAGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSTLNYC*GSSCRC
Trigger: GCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGT...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTCATCAATACATGCCTaGTGCAGGGCTGTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGSSIHA*CRAVKP
Trigger: CGGCTTGACAGCCCTGCACCAGGCATGTATTGATGA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGATCTTTGGGCTCTTCTaGCTTGTTAAAAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: CLGIPPYPPKLHLIFVVQIFGLF*LVKKAR
Trigger: TCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGAT...CTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTAAGAGGAGCGATAGATaGAAGAGCCTCGGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSKRSDR*KSLGPL
Trigger: TAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCTT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAAAGTTGATACATAGGTaGAGGGAGCAATTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGKLIHR*REQLSV
Trigger: CACAGACAATTGCTCCCTCCACCTATGTATCAACTT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCAGTGTTTGCACTGATTaGTGCAGGGCAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFSVCTD*CRARRG
Trigger: GCCTCTTCTTGCCCTGCACCAATCAGTGCAAACACT...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR CCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCAGGCTGGAGTGCAGTaGCGTGATCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFQAGVQ*RDQGSL
Trigger: CAGTGAGCCTTGATCACGCCACTGCACTCCAGCCTG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGATAATTACCATCTCATaGGGCTTCCAGACAATACAG +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGIITIS*GFQTIQ
Trigger: CTGTATTGTCTGGAAGCCCCATGAGATGGTAATTAT...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCCCTTTCGCTAGAGATTaGGATGGGGCTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSPFARD*DGAGVI
Trigger: GATGACCCCAGCCCCATCCCAATCTCTAGCGAAAGG...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATCCTTGCTTCCTGAGTaGAACCATCTAATAAGCACA +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGSLLPE*NHLIST
Trigger: TGTGCTTATTAGATGGTTCCACTCAGGAAGCAAGGA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCCACTCACCAGTGGCCTaGACCGAAACACTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSHSPVA*TETLAF
Trigger: AAAGGCCAGTGTTTCGGTCCAGGCCACTGGTGAGTG...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCATCCTTTTTGCACCTTTaGAGGTGCAAAGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESASFLHL*RCKAAW
Trigger: CCAGGCGGCTTTGCACCTCCAAAGGTGCAAAAAGGA...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAAAATAAGCAGATGAATTaGGGAACAGCTCAAATAGGT +
Preference number: 4 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKNKQMN*GTAQIG
Trigger: ACCTATTTGAGCTGTTCCCCAATTCATCTGCTTATT...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGATCTTGGCTGATTCATaGAAAACCACCTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: IERLNAVTVTLDANHSRGILADS*KTTSLK
Trigger: CTTTAGAGAGGTGGTTTTCCATGAATCAGCCAAGAT...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCTCCTTGGCCAGGCTATaGAGGAGTCATACGGGCCTA +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSSLARL*RSHTGL
Trigger: TAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGA...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGAGACATGGCTACTCATaGTCTCCTTGGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQRHGYS*SPWPGY
Trigger: ATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCT...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTTCCTTGCTCTTTGAATaGGCTGAGCTGTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSSLLFE*AELLPP
Trigger: TGGTGGCAACAGCTCAGCCCATTCAAAGAGCAAGGA...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTGGTTACTTGAAGCTTaGAACCTTGATATCTATCTA +
Preference number: 4 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDWLLEA*NLDIYL
Trigger: TAGATAGATATCAAGGTTCCAAGCTTCAAGTAACCA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGAGAGGCAGGGCTTGCTaGATGGAGAAACCAGACCCA +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLRGRAC*MEKPDP
Trigger: TGGGTCTGGTTTCTCCATCCAGCAAGCCCTGCCTCT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCTGTTCTGCTGCTGCTTaGGTTACAAACAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSCSAAA*VTNSWV
Trigger: CACCCAGCTGTTTGTAACCCAAGCAGCAGCAGAACA...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGATGGTCCTGAGGCTCTaGCTTCTAACCCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQMVLRL*LLTQNL
Trigger: GAGATTCTGGGTTAGAAGCCAGAGCCTCAGGACCAT...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTCAGGGACCTTTGTGCTaGGAACTGAAAGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCQGPLC*ELKEWG
Trigger: TCCCCACTCTTTCAGTTCCCAGCACAAAGGTCCCTG...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAAGGAGCAGACAGCAGTaGGACTCCATGGTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKRSRQQ*DSMVLD
Trigger: ATCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCT...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp TCTCACAGCCCAGTAGGCTGCTATCTTCCATCTTCTTaGTCACAATGTTGCAAGTGGCCTCAGATACTTGAC +
Preference number: 4 (lower is better)
Translates to: SHSPVGCYLPSS*SQCCKWPQILD
Trigger: GTCAAGTATCTGAGGCCACTTGCAACATTGTGACAAAGAAGATGGAAGATAGCAGCCTACTGGGCTGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCTTCTTCCTCCATTTCTaGCATTTTGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSFFLHF*HFALQG
Trigger: GCCTTGGAGCGCAAAATGTCAGAAATGGAGGAAGAA...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AACTGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCTCAGATCTGACTCAATaGGTTTATTCCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NCLGIPPYPPKLHLIFVVSDLTQ*VYSVSP
Trigger: AGGAGACACGGAATAAACTCATTGAGTCAGATCTGA...GACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR TCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGCTGGTATCTGCTCTGTaGTACTACTCTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKLVSAL*YYSCFQ
Trigger: CTGAAAGCAAGAGTAGTATCACAGAGCAGATACCAG...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGGCTATTTATTCAGCTTaGGCTGCCTGGGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGAIYSA*AAWGAH
Trigger: ATGAGCACCCCAGGCAGCTCAAGCTGAATAAATAGC...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGTCTGCTATTTGGGTGTaGAGAGCCAATGTAGATCCC +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQSAIWV*RANVDP
Trigger: GGGATCTACATTGGCTCTTCACACCCAAATAGCAGA...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTACCCTCGGCTCCAAGTaGGAAAAGCAAGGAATTAAG +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSTLGSK*EKQGIK
Trigger: CTTAATTCCTTGCTTTTCTCACTTGGAGCCGAGGGT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTAGAAATCCCATGCTCTaGACTGTGGAGACAGTCACA +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSRNPML*TVETVT
Trigger: TGTGACTGTCTCCACAGTTCAGAGCATGGGATTTCT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGAGGCTGCCCCAGATGTaGGATTCTAGAAATCCCATG +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGRLPQM*DSRNPM
Trigger: CATGGGATTTCTAGAATCTCACATCTGGGGCAGCCT...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGCACGTGACGGCTAGGTaGTACTGTATCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLHVTAR*YCICRP
Trigger: AGGTCTGCAGATACAGTATCACCTAGCCGTCACGTG...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCCTTCTGAAGCCATTTaGGCCTCATCTGCCCCCATC +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFPSEAI*ASSAPI
Trigger: GATGGGGGCAGATGAGGCTCAAATGGCTTCAGAAGG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAACCATTTCTGACATTTTaGGCTCCAAGGCTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKPFLTF*APRLAS
Trigger: AGAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGG...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGCCCTGTTCTCAGCCTaGAGTTGCTCGTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFALFSA*SCSFIC
Trigger: GCAGATGAACGAGCAACTGCAGGCTGAGAACAGGGC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGATCAATTCAACATCCTaGTGTTTCTCTTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKINSTS*CFSWHP
Trigger: GGGGTGCCAAGAGAAACAGCAGGATGTTGAATTGAT...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTGTGTCTTTCCAGCCTaGTTCCACTTCCTAGTCCAT +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFCVFPA*FHFLVH
Trigger: ATGGACTAGGAAGTGGAAGCAGGCTGGAAAGACACA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATCTTTGTCACAATGTTaGAAGTGGCCTCAGATACTT +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGSLSQC*KWPQIL
Trigger: AAGTATCTGAGGCCACTTGCAACATTGTGACAAAGA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGGAAGTAAACACATCCTaGAGTTGGAAGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQEVNTS*SWKTGR
Trigger: CCTCCCTGTCTTCCAACTGCAGGATGTGTTTACTTC...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAATTAAAGTGCGGTCAGTaGTGGCATAAACAATGGGGT +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKLKCGQ*WHKQWG
Trigger: ACCCCATTGTTTATGCCAGCACTGACCGCACTTTAA...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTTCCTTCCCAGTACTTaGAGCTTCCACCCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGFLPST*SFHPAL
Trigger: TAGAGCAGGGTGGAAGCTGCAAGTACTGGGAAGGAA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACCTTTCCTGAATCCTTaGTCTTTGAATGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLPFLNP*SLNGLS
Trigger: GCTCAGCCCATTCAAAGAGCAAGGATTCAGGAAAGG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTCTCCTGAGAACACATaGCAGGCTGTGGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLSPENT*QAVELW
Trigger: CCACAGTTCCACAGCCTGGCATGTGTTCTCAGGAGA...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTTCTGCCCTGACTCCTaGCCATCTAAGGACTTGATT +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFFCPDS*PSKDLI
Trigger: AATCAAGTCCTTAGATGGGCAGGAGTCAGGGCAGAA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAGTTGTCACTCCCTCCTaGTCCCTCAGTCCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIVVTPS*SLSPVS
Trigger: TGACACGGGACTGAGGGAGCAGGAGGGAGTGACAAC...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCAGTCACTGTCACCTTaGATGCTAACCATTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSQSLSP*MLTIPE
Trigger: CTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTCAGTCACTGTCACCTTaGATGCTAACCATTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCQSLSP*MLTIPE
Trigger: CTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTG...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTACATCAAATGGTGTCTaGCCCAGTTTATTTCGAATA +
Preference number: 4 (lower is better)
Translates to: RFPGIGHLTQHVVAASFSTSNGV*PSLFRI
Trigger: TATTCGAAATAAACTGGGCCAGACACCATTTGATGT...AGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAATGCGCCTTGGAGAAATaGCTAGGTATGAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKCALEK*LGMREE
Trigger: TTCCTCCCTCATACCTAGCCATTTCTCCAAGGCGCA...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGAGCCACTGCACCTGGTaGAATTGGGATCTTGAATTA +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKSHCTW*NWDLEL
Trigger: TAATTCAAGATCCCAATTCCACCAGGTGCAGTGGCT...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTGTAACCCCTTTCCCTaGTCTATTGAGTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKCNPFP*SIEWKR
Trigger: CCTTTTCCACTCAATAGACCAGGGAAAGGGGTTACA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAACACTCACCAGTGGCCTaGACCGAAACACTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQHSPVA*TETLAF
Trigger: AAAGGCCAGTGTTTCGGTCCAGGCCACTGGTGAGTG...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATAAAGCTGAGGAAAGGTaGTTGAGGAAACCTATGAAG +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINKAEER*LRKPMK
Trigger: CTTCATAGGTTTCCTCAACCACCTTTCCTCAGCTTT...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCGAGTCAAGCTACTTCTaGCCCTTGCATGTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFESSYF*PLHVPY
Trigger: ATAAGGGACATGCAAGGGCCAGAAGTAGCTTGACTC...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGCTCCAGGAACACCGTTaGCTAGATGTGTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLLQEHR*LDVCLS
Trigger: GGACAAGCACACATCTAGCCAACGGTGTTCCTGGAG...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTTCAAAATCAGGGCCTaGCAGAGCCTAGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLFKIRA*QSLASP
Trigger: TGGCGAAGCTAGGCTCTGCCAGGCCCTGATTTTGAA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCTGGAATCAGGTGCTTaGACCAGTGAAGACATGTCT +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSLESGA*TSEDMS
Trigger: AGACATGTCTTCACTGGTCCAAGCACCTGATTCCAG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTCATTTCAGAGCAGGCTaGAATCAGGTGCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCHFRAG*NQVLGP
Trigger: TGGTCCAAGCACCTGATTCCAGCCTGCTCTGAAATG...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp AGTGTGCTAGTGTTCACCTGGATGGCCTCAACACCTTaGTCACTTAAACCTGGTGTCTTCCAAGAAATAACC +
Preference number: 4 (lower is better)
Translates to: SVLVFTWMASTP*SLKPGVFQEIT
Trigger: GGTTATTTCTTGGAAGACACCAGGTTTAAGTGACAAAGGTGTTGAGGCCATCCAGGTGAACACTAGCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTCAGTTCCTGAGAGGTaGAGAAGAATAGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLSVPER*RRIERL
Trigger: GAGGCGCTCTATTCTTCTTCACCTCTCAGGAACTGA...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCCTACCTGAATTAAAAGTCTaGGGACTTCAGAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: DSSLGSSGLLKRPEENLLPELKV*GLQSSP
Trigger: AGGGCTACTCTGAAGTCCTCAGACTTTTAATTCAGG...TAGGAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR TCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGAGAAATCCGAGGGCTTaGAGAGGAGCGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLRNPRA*RGAIDG
Trigger: TCCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCAGAAATCCGAGGGCTTaGAGAGGAGCGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSRNPRA*RGAIDG
Trigger: TCCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCT...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGAAGCAAATAGCTACTTaGATAAACTATCAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: CLGIPPYPPKLHLIFVVQKQIAT*INYQCA
Trigger: GGCACACTGATAGTTTATTCAAGTAGCTATTTGCTT...CTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR TCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCCTTTCAGAGTTGGAATaGTTGACAAAGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFLSELE*LTKASG
Trigger: GCCAGAAGCCTTTGTCAATCATTCCAACTCTGAAAG...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTGGGAGACGAAAACAATaGGCTGACACTTATGCCATA +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCGRRKQ*ADTYAI
Trigger: TATGGCATAAGTGTCAGCTCATTGTTTTCGTCTCCC...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGCAGGCAGACTTCAGCTaGTATGAGGAAAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQQADFS*YEEKLS
Trigger: AGAGAGTTTTTCCTCATATCAGCTGAAGTCTGCCTG...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACTTTCCCTGGTCTATTaGGTGGAAAAGGGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLLSLVY*VEKGQD
Trigger: ATCTTGACCCTTTTCCACTCAATAGACCAGGGAAAG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTCTAGGGAACATCAAATaGGAATGGCCCACTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCLGNIK*EWPTRE
Trigger: TTCTCTAGTGGGCCATTCTCATTTGATGTTCCCTAG...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAGAACTCACATCTTATaGAGGGTTAGACCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLRTHIL*RVRPCL
Trigger: AAGGCAGGGTCTAACCCTTCATAAGATGTGAGTTCT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATGGAATACAGATGTTCTaGCTTCTAGGGTCTTATCTT +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINGIQMF*LLGSYL
Trigger: AAGATAAGACCCTAGAAGTCAGAACATCTGTATTCC...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTCTGCTATTTGGGTGTaGAGAGCCAATGTAGATCCC +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGSAIWV*RANVDP
Trigger: GGGATCTACATTGGCTCTTCACACCCAAATAGCAGA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGCCTGTAGGAGGCTTGTaGAAGCCAAGTGCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLPVGGL*KPSAVL
Trigger: TAGAACAGCACTTGGCTTTCACAAGCCTCCTACAGG...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGATCAATAGCTGTCCCTaGCAGGGTCTACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLINSCP*QGLLLP
Trigger: AGGAAGCAGTAGACCCTGTCAGGGACAGCTATTGAT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTCTCTCAAAGGAGAAGTaGATGCATCTTTCACCATGC +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCLSKEK*MHLSPC
Trigger: GCATGGTGAAAGATGCATTCACTTCTCCTTTGAGAG...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGGACATAAGAGCATCCTaGTGTCACCTTAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLDIRAS*CHLKGP
Trigger: TGGCCCCTTAAGGTGACATCAGGATGCTCTTATGTC...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAATAGCCGAGGAGCTTTaGAACTGGAATAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIIAEEL*NWNRGR
Trigger: CCGCCCCCTATTCCAGTTTCAAAGCTCCTCGGCTAT...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTGTGAACCACTCAACTaGGCACAGGCTGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLCEPLN*AQAVAS
Trigger: AGAAGCTACAGCCTGTGCTCAGTTGAGTGGTTCACA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAATCTTTTCACCCCTGTTaGTCAAGGTCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKSFHPC*SRSGQR
Trigger: TCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGA...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTATGGATATAGCAGATaGCTAAGGGTGATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFYGYSR*LRVMAG
Trigger: TCCTGCCATCACCCTTAGTCATCTGCTATATCCATA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGGGGTCACTACTTCTACCAAATGAAGCACTTCTCTGCACCAAACTTGCGAGTGCGAGTTTCACATCTTaGTGGATCTTTTCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: VGSLLLPNEALLCTKLASASFTS*WIFSSK
Trigger: CTTACTTGAAAAGATCCATCAAGATGTGAAACTCGC...ACTCGCAAGTTTGGTGCAGAGAAGTGCTTCATTTGGTAGAAGTAGTGACCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAAATAGAGCGCCTCAATaGAGTCACTGTCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESANRAPQ*SHCHLG
Trigger: TCCAAGGTGACAGTGACTGCATTGAGGCGCTCTATT...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATCCGGCCTCGGCAGCTaGTGCCAAAACTACCAACAC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFASGLGS*CQNYQH
Trigger: GTGTTGGTAGTTTTGGCAGCAGCTGCCGAGGCCGGA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACGCTTCCCTCCTAGGTaGTCCAGTTCCGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFARFPPR*SSSAIA
Trigger: AGCAATGGCGGAACTGGAGCACCTAGGAGGGAAGCG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp GGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAAAATAAACTATCAGTGTaGCTCTCTCTCTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: GIGHLTQHVVAASFSQSQNKLSV*LSLFKD
Trigger: GTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATT...TTGGGACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTGCTGGTGCTGGTATCTaGTCTGTGATACTACTCTTG +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCAGAGI*SVILLL
Trigger: CAAGAGTAGTATCACAGAGCAGATACCAGCACCAGC...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GAACCAATGGTAATGGGTGAGGTAGCAGGAGATGAATTGCGATTGGCTGAAATGGCCATGATGTACAGATaGAGTAGTGTTTGCACTGAT +
Preference number: 4 (lower is better)
Translates to: EPMVMGEVAGDELRLAEMAMMYR*SSVCTD
Trigger: ATCAGTGCAAACACTACTGCATCTGTACATCATGGC...CATTTCAGCCAATCGCAATTCATCTCCTGCTACCTCACCCATTACCATTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR GCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGGTGGCTAGGAGAGGCTaGAAACAGGCCAAAAATCCA +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLVARRG*KQAKNP
Trigger: TGGATTTTTGGCCTGTTTGCAGCCTCTCCTAGCCAC...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCAGTGTGTGCTTAAAGTaGGGTCAGTGCTGGCATAAA +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFSVCLK*GQCWHK
Trigger: TTTATGCCAGCACTGACCGCACTTTAAGCACACACT...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGCAAAAGTTCAAGGGATaGTGGCTAGAAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKQKFKG*WLEKEV
Trigger: TACCTCCTTTTCTAGCCAGCATCCCTTGAACTTTTG...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATCTTCTCCAAGAAGGATaGAAGGGTGAAACATTCTTT +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINLLQEG*KGETFF
Trigger: AAAGAATGTTTCACCCTTGCATCCTTCTTGGAGAAG...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTAGTCTAGGAACCCTTTaGATCGGTCATGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCSLGTL*IGHASL
Trigger: CAAAGAAGCATGACCGATGCAAAGGGTTCCTAGACT...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTGTTTGCTGCACATCTaGCTGCAGAGCCAAACCTCA +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLCLLHI*LQSQTS
Trigger: TGAGGTTTGGCTCTGCAGGCAGATGTGCAGCAAACA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GAACCAATGGTAATGGGTGAGGTAGCAGGAGATGAATTGCGATTGGCTGAAATGAATGAAGCACTTCTCTaGACCAAACTTGCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: EPMVMGEVAGDELRLAEMNEALL*TKLASF
Trigger: GAAACTCGCAAGTTTGGTGCAGAGAAGTGCTTCATT...CATTTCAGCCAATCGCAATTCATCTCCTGCTACCTCACCCATTACCATTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTTTCTTGTTTCTGCTaGGCCACCTTCTCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCFSCFC*ATFSSL
Trigger: CAAGCTTGAGAAGGTGGCCCAGCAGAAACAAGAAAA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTCATCTTTCAGCCTCTaGTTGTCGGATTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKSSFSL*LSDFSS
Trigger: AGAACTGAAATCCGACAACCAGAGGCTGAAAGATGA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTCATCTTTCAGCCTCTaGTTGTCGGATTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSSSFSL*LSDFSS
Trigger: AGAACTGAAATCCGACAACCAGAGGCTGAAAGATGA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCCATTTCTTTTGGTTaGAAGGCAAGGACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: AVTVTLDANHSRGHLMINSISFG*KARTGK
Trigger: TTTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGA...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCAACATCCATTTCTTTTaGTTGGAAGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSNIHFF*LEGKDW
Trigger: CCAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTT...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCCTGCTGTTTCTCTTaGCACCCCAATCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLSCCFS*HPNQDP
Trigger: AGGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAACATCAAATGGTGTCTaGCCCAGTTTATTTCGAATA +
Preference number: 4 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGTSNGV*PSLFRI
Trigger: TATTCGAAATAAACTGGGCCAGACACCATTTGATGT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAACCAATGGTAATGGGTGAGGTAGCAGGAGATGAATTGCGATTGGCTGAAATGAAGTTGATACATAGGTaGAGGGAGCAATTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: EPMVMGEVAGDELRLAEMKLIHR*REQLSV
Trigger: CACAGACAATTGCTCCCTCCACCTATGTATCAACTT...CATTTCAGCCAATCGCAATTCATCTCCTGCTACCTCACCCATTACCATTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGAAGGGGGAAGATAAGTaGGAGACGAAAACAATGAGC +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQKGEDK*ETKTMS
Trigger: GCTCATTGTTTTCGTCTCCCACTTATCTTCCCCCTT...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGACTGATAAGCTCCAGTaGAACCAGTGGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLTDKLQ*NQWLIW
Trigger: CCAGATGAGCCACTGGTTCCACTGGAGCTTATCAGT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCTGTTCTATGCAATATaGTTGTGTGGACTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSLFYAI*LCGLWV
Trigger: AACCCAGAGTCCACACAACCATATTGCATAGAACAG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGGAAAAGGAGGTATTCTaGATTGCTGCCTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGEKEVF*IAASSQ
Trigger: CTGAGAGGAGGCAGCAATCCAGAATACCTCCTTTTC...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGATGCTACCACTAAAATaGGAGAGGCATGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQMLPLK*ERHGNL
Trigger: GAGGTTTCCATGCCTCTCCCATTTTAGTGGTAGCAT...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAGAAGGGGCCTCTATGTaGACAGGAGTTGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIEGASM*TGVVGG
Trigger: GCCTCCTACAACTCCTGTCCACATAGAGGCCCCTTC...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGGTGCTAGTGTTCACCTaGATGGCCTCAACACCTTTG +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLVLVFT*MASTPL
Trigger: CAAAGGTGTTGAGGCCATCCAGGTGAACACTAGCAC...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCTCCAGGAACACCGTTaGCTAGATGTGTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFLQEHR*LDVCLS
Trigger: GGACAAGCACACATCTAGCCAACGGTGTTCCTGGAG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATACAGGCAGAGCAGGTGTaGACTAAGTCCCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIQAEQV*TKSPDL
Trigger: AAGGTCAGGGGACTTAGTCCACACCTGCTCTGCCTG...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGAGCAGTGGGACTCCATaGTTCTGGATACCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLSSGTP*FWIPFL
Trigger: CAGGAAAGGTATCCAGAACCATGGAGTCCCACTGCT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp TTGCCTTTTTGTCCTCAAAGCTGCCTGCTTATTGGGTaGGAAGAACTCACATCTTATGAAGGGTTAGACCCT +
Preference number: 4 (lower is better)
Translates to: LPFCPQSCLLIG*EELTSYEGLDP
Trigger: AGGGTCTAACCCTTCATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTTTGAGGACAAAAAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCACCTGAATTAAAAGTCTaGGGACTTCAGAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAPELKV*GLQSSP
Trigger: AGGGCTACTCTGAAGTCCTCAGACTTTTAATTCAGG...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCATCAGATCTGACTCAATaGGTTTATTCCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: MLWLPVFLSPNLHEEGDSSDLTQ*VYSVSP
Trigger: AGGAGACACGGAATAAACTCATTGAGTCAGATCTGA...TGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR TCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTTCAGATCTGACTCAATaGGTTTATTCCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSSDLTQ*VYSVSP
Trigger: AGGAGACACGGAATAAACTCATTGAGTCAGATCTGA...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGTAGAGAAGCAAATAGCTACTTaGATAAACTATCAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: WNSPIPSQTAPYLCCPVEKQIAT*INYQCA
Trigger: GGCACACTGATAGTTTATTCAAGTAGCTATTTGCTT...CTCTACTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR TCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCACTTTTCAAGTAAGTTaGTACATAGGTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSTFQVS*YIGGGS
Trigger: GCTCCCTCCACCTATGTATCAACTTACTTGAAAAGT...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR TCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTCAGGCAGACTTCAGCTaGTATGAGGAAAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCQADFS*YEEKLS
Trigger: AGAGAGTTTTTCCTCATATCAGCTGAAGTCTGCCTG...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCACCCTCGGCTCCAAGTaGGAAAAGCAAGGAATTAAG +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSTLGSK*EKQGIK
Trigger: CTTAATTCCTTGCTTTTCTCACTTGGAGCCGAGGGT...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCGGTCAGAAAGAGAAATaGCATTTGCAGTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSGQKEK*HLQSRN
Trigger: GTTCCTAGACTGCAAATGTCATTTCTCTTTCTGACC...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTCCTGGCTAAGAATATaGGCTTTTTACTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSSWLRI*AFYSAN
Trigger: ATTGGCAGAGTAAAAAGCTCATATTCTTAGCCAGGA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTAGGTGCTTGGACCAGTaGAGACATGTCTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFRCLDQ*RHVLLP
Trigger: AGGAAGCAAGACATGTCTTCACTGGTCCAAGCACCT...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTTTTACAGAACTGGTTaGGGCTGCTCCTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKFYRTG*GCSFDF
Trigger: AAAATCAAAGGAGCAGCCTCAACCAGTTCTGTAAAA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTCCTTTTCAAGTAAGTTaGTACATAGGTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCPFQVS*YIGGGS
Trigger: GCTCCCTCCACCTATGTATCAACTTACTTGAAAAGG...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTTCTCAGCCTGCAGTTaGTCGTTCATCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLFSACS*SFICFK
Trigger: CTTGAAGCAGATGAACGAGCAACTGCAGGCTGAGAA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTATCAATTCAACATCCTaGTGTTTCTCTTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCINSTS*CFSWHP
Trigger: GGGGTGCCAAGAGAAACAGCAGGATGTTGAATTGAT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATCAATACATGCCTGGTaGAGGGCTGTCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFASIHAW*RAVKPS
Trigger: GGACGGCTTGACAGCCCTGCACCAGGCATGTATTGA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp TGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGAATAAACTATCAGTGTaGCTCTCTCTCTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: CLGIPPYPPKLHLIFVVQNKLSV*LSLFKD
Trigger: GTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATT...CTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR GCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTACAACTGAGGTCAGGTaGTCTGTCCTAGCTTTTATA +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSTTEVR*SVLAFI
Trigger: TATAAAAGCTAGGACAGAGCACCTGACCTCAGTTGT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCCTCTCATTCCTCCTTaGACTGACTTCATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSPLIPP*TDFISH
Trigger: ATGAGAAATGAAGTCAGTGCAAGGAGGAATGAGAGG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCGTTGTTGGCCATGTCTaGAGCTATTTATTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSVVGHV*SYLFSL
Trigger: CAAGCTGAATAAATAGCTGCAGACATGGCCAACAAC...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTGGCTAGGAGAGGCTaGAAACAGGCCAAAAATCCA +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFVARRG*KQAKNP
Trigger: TGGATTTTTGGCCTGTTTGCAGCCTCTCCTAGCCAC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCAGGAGGGAAAGCCATTaGAACATCATTCAATTACCC +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFRRESH*NIIQLP
Trigger: GGGTAATTGAATGATGTTGCAATGGCTTTCCCTCCT...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTAACTTGTCCAAAGGCTaGCTGCAACAAATTGCTTTC +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSNLSKG*LQQIAF
Trigger: GAAAGCAATTTGTTGCAGGCAGCCTTTGGACAAGTT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAGAAAAACGATTAGTCTaGTATTTGGGTGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKEKRLV*YLGVKS
Trigger: GCTCTTCACACCCAAATAGCAGACTAATCGTTTTTC...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCTTGTGAAAGCCAAGTaGTGTTCTATGCAATATGGT +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSLVKAK*CSMQYG
Trigger: ACCATATTGCATAGAACAGCACTTGGCTTTCACAAG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCCACTTCCAGGGTCTCTaGCCTTTCACTCCAATTACA +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSHFQGL*PFTPIT
Trigger: TGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGCCTTTCCTGAATCCTTaGTCTTTGAATGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLPFLNP*SLNGLS
Trigger: GCTCAGCCCATTCAAAGAGCAAGGATTCAGGAAAGG...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCATTCTAGAAATCCCATaGTCTGAACTGTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFILEIP*SELWRQ
Trigger: CTGTCTCCACAGTTCAGAGCATGGGATTTCTAGAAT...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAAAGGACTTGATTTGCTaGTTTCTGAAAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAKDLIC*FLKTLG
Trigger: CCCCAGGGTTTTCAGAAAGCAGCAAATCAAGTCCTT...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGAGTGAAGACATGTCTTaGTTCCTCCAGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLSEDMS*FLQLSL
Trigger: CAGAGAGAGCTGGAGGAAGCAAGACATGTCTTCACT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCACATTTGAGCCTCATCTaGCCCCATCCGTGTATATTT +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAHLSLI*PHPCIF
Trigger: AAATATACACGGATGGGGGCAGATGAGGCTCAAATG...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAATTTTCTTGTTTCTGCTaGGCCACCTTCTCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKFSCFC*ATFSSL
Trigger: CAAGCTTGAGAAGGTGGCCCAGCAGAAACAAGAAAA...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGTCATCTTTCAGCCTCTaGTTGTCGGATTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQSSFSL*LSDFSS
Trigger: AGAACTGAAATCCGACAACCAGAGGCTGAAAGATGA...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCAGAGCATTCTCCAGATaGCTCGAATTACCACAATCA +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFRAFSR*LELPQS
Trigger: TGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCT...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCATATCTTTGGGCTCTTCTaGCTTGTTAAAAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: CCGCQFFSVPISMKKEIHIFGLF*LVKKAR
Trigger: TCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGAT...ATGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTAAGGGGGAAGATAAGTaGGAGACGAAAACAATGAGC +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCKGEDK*ETKTMS
Trigger: GCTCATTGTTTTCGTCTCCCACTTATCTTCCCCCTT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTGCACCTGGTGGAATTaGGATCTTGAATTACAGCTT +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCCTWWN*DLELQL
Trigger: AAGCTGTAATTCAAGATCCCAATTCCACCAGGTGCA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTTGCACCTGGTGGAATTaGGATCTTGAATTACAGCTT +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSCTWWN*DLELQL
Trigger: AAGCTGTAATTCAAGATCCCAATTCCACCAGGTGCA...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGAAGGGTCATGTGAAGTaGCAGGGATGCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLKGHVK*QGCNTN
Trigger: ATTGGTGTTGCATCCCTGCCACTTCACATGACCCTT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAGGGGTCATCATACTCTaGAGCTATCTGGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKGVIIL*SYLEKD
Trigger: ATCCTTTTCCAGATAGCTCCAGAGTATGATGACCCC...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTGGGGTCATCATACTCTaGAGCTATCTGGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCGVIIL*SYLEKD
Trigger: ATCCTTTTCCAGATAGCTCCAGAGTATGATGACCCC...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTTAAACTTGGGGTaGGAACTAGGACAGAAACCA +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCFLNLG*ELGQKP
Trigger: TGGTTTCTGTCCTAGTTCCCACCCCAAGTTTAAGAA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGGAGAAGGGGTGGCCTTaGAATACAGATGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLEKGWP*NTDVLT
Trigger: AGTCAGAACATCTGTATTCCAAGGCCACCCCTTCTC...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAGCAGCTGCTGGCTGCTaGCCAAGATTCTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQAAAGC*PRFCVF
Trigger: AAAAACACAGAATCTTGGCCAGCAGCCAGCAGCTGC...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAGGTGGTGGTGGTGGTTaGTATACCCAACTTCTACAG +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQGGGGG*YTQLLQ
Trigger: CTGTAGAAGTTGGGTATACCAACCACCACCACCACC...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAAGAGTAAACCAGACATaGCTACTCATGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKRVNQT*LLMVSL
Trigger: CAAGGAGACCATGAGTAGCCATGTCTGGTTTACTCT...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTTTCAGCAGACGGACTaGGATTTATCACCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLFQQTD*DLSPEG
Trigger: ACCCTCAGGTGATAAATCCCAGTCCGTCTGCTGAAA...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCGTGGAATTGGGATCTTaGATTACAGCTTCTAGTTTA +
Preference number: 4 (lower is better)
Translates to: VTLDANHSRGHLMINSTSVELGS*ITASSL
Trigger: TAAACTAGAAGCTGTAATTCAAGATCCCAATTCCAC...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTCAAAGTACATGGCTTTaGGAGTTTCTTCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCQSTWL*EFLLPS
Trigger: TGATGGAAGAAGAAACTCTCAAAGCCATGTACTTTG...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCGGCGAGAGAGTATGGTaGCTAAGATTTGTAGTAATA +
Preference number: 4 (lower is better)
Translates to: DANHSRGHLMINSTSCCFGERVW*LRFVVI
Trigger: TATTACTACAAATCTTAGTCACCATACTCTCTCGCC...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGAGAACTCACATCTTATaGAGGGTTAGACCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLRTHIL*RVRPCL
Trigger: AAGGCAGGGTCTAACCCTTCATAAGATGTGAGTTCT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTTCCCAAAAAGGATaGGAAGTCAACCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKTSQKG*EVNLDV
Trigger: CACATCAAGGTTGACTTCTCATCCTTTTTGGGAAGT...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAGATGCACTGATACACTaGTTGATTAGGTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKDALIH*LIRFVL
Trigger: CAGCACAAACCTAATCAATCAGTGTATCAGTGCATC...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAGTTACATCTGGTGTGTaGACCTTGGTGGAACTAGGG +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIVTSGV*TLVELG
Trigger: CCCTAGTTCCACCAAGGTTCACACACCAGATGTAAC...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGGGTCAGAAAGAGAAATaGCATTTGCAGTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGGQKEK*HLQSRN
Trigger: GTTCCTAGACTGCAAATGTCATTTCTCTTTCTGACC...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGCTAGAAAGTCTTTCATaGCACGTTTCTTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQLESLS*HVSLTS
Trigger: AGAGGTCAAAGAAACGTGGCATGAAAGACTTTCTAG...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACTTTTGAGTAATAAATaGATAGCCACCAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLLLSNK*IATRGY
Trigger: GTAGCCTCTGGTGGCTATGCATTTATTACTCAAAAG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAGTTGTTGGCCATGTCTaGAGCTATTTATTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKVVGHV*SYLFSL
Trigger: CAAGCTGAATAAATAGCTGCAGACATGGCCAACAAC...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAGAAGTAAACACATCCTaGAGTTGGAAGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQEVNTS*SWKTGR
Trigger: CCTCCCTGTCTTCCAACTGCAGGATGTGTTTACTTC...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAAGGAGGGAAAGCCATTaGAACATCATTCAATTACCC +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESARRESH*NIIQLP
Trigger: GGGTAATTGAATGATGTTGCAATGGCTTTCCCTCCT...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCTGCCTGCAACAAATTaGTTTCTATCCATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSLPATN*FLSISP
Trigger: TGGAGAAATGGATAGAAAGCAATTTGTTGCAGGCAG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAAACTTGTCCAAAGGCTaGCTGCAACAAATTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKNLSKG*LQQIAF
Trigger: GAAAGCAATTTGTTGCAGGCAGCCTTTGGACAAGTT...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGGGTTTGTAAACACTaGTTTGGTAGTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGWVCKH*FGSLLF
Trigger: GAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTCCAAGTGCTGTTCTATaGAATATGGTTGTGTGGACT +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCPSAVL*NMVVWT
Trigger: AGTCCACACAACCATATTGCATAGAACAGCACTTGG...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTTCTTTCCTTCCTTCTaGAGGGAAATCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLFFPSF*REIIAL
Trigger: CAGGGCAATGATTTCCCTGCAGAAGGAAGGAAAGAA...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATACAAAGCAAGTCTGGCTaGTTCTCCCTAAACAACCCC +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIQSKSG*FSLNNP
Trigger: GGGGTTGTTTAGGGAGAAGCAGCCAGACTTGCTTTG...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTATTCTAGAAATCCCATaGTCTGAACTGTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCILEIP*SELWRQ
Trigger: CTGTCTCCACAGTTCAGAGCATGGGATTTCTAGAAT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTAAAATCAGAAGAGGCTaGCCCAGATGTGAGATTCTA +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCKIRRG*PRCEIL
Trigger: TAGAATCTCACATCTGGGGCAGCCTCTTCTGATTTT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTGTGCTTGTTCTGCTaGTGCTTGGGTTACAAACAG +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFVCLFC*CLGYKQ
Trigger: CTGTTTGTAACCCAAGCAGCAGCAGAACAAGCACAC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGCAAGTGTGCTTGTTCTaGTGCTGCTTGGGTTACAAA +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLQVCLF*CCLGYK
Trigger: TTTGTAACCCAAGCAGCAGCAGAACAAGCACACTTG...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTTTTGCCTCTGTTTTGTaGCCCAGGACAGGACTGAAT +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFFASVL*PRTGLN
Trigger: ATTCAGTCCTGTCCTGGGGCACAAAACAGAGGCAAA...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTTTTCTTGTTTCTGCTaGGCCACCTTCTCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLFSCFC*ATFSSL
Trigger: CAAGCTTGAGAAGGTGGCCCAGCAGAAACAAGAAAA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTTTTCTTGTTTCTGCTaGGCCACCTTCTCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLFSCFC*ATFSSL
Trigger: CAAGCTTGAGAAGGTGGCCCAGCAGAAACAAGAAAA...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAAACATCCATTTCTTTTaGTTGGAAGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKNIHFF*LEGKDW
Trigger: CCAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTT...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAAACATCCATTTCTTTTaGTTGGAAGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESANIHFF*LEGKDW
Trigger: CCAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTT...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCCTTGGGATAGGGGTTTaGAAGAACAGGGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSLGIGV*KNRALK
Trigger: TTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAG...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAAGAGCATTCTCCAGATaGCTCGAATTACCACAATCA +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKRAFSR*LELPQS
Trigger: TGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCT...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATCATCAATACATGCCTaGTGCAGGGCTGTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFASSIHA*CRAVKP
Trigger: CGGCTTGACAGCCCTGCACCAGGCATGTATTGATGA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAAAATGTAGGGACTTGTaGGGTCACTACTTCTACCAA +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAKCRDL*GHYFYQ
Trigger: TTGGTAGAAGTAGTGACCCCACAAGTCCCTACATTT...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCGGAAGTGAGGCAGAATaGAGTATTCAGAGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSGSEAE*SIQSPN
Trigger: ATTTGGGCTCTGAATACTCCATTCTGCCTCACTTCC...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAACATGACTCTCATCAATaGGTTGAAAGTACTTCATTC +
Preference number: 4 (lower is better)
Translates to: PISTSAGFNILTKPAGGKHDSHQ*VESTSF
Trigger: GAATGAAGTACTTTCAACCCATTGATGAGAGTCATG...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTCCAGAATCTCTGGAATaGCCAAATCATTACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCPESLE*PNHYFQ
Trigger: TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGG...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTTTCTTAAACTTGGGGTaGGAACTAGGACAGAAACCA +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCFLNLG*ELGQKP
Trigger: TGGTTTCTGTCCTAGTTCCCACCCCAAGTTTAAGAA...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAGTGTATGCTTATTCTaGAAGGACATAAGAGCATCC +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLSVCLF*KDIRAS
Trigger: GGATGCTCTTATGTCCTTCCAGAATAAGCATACACT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAAAGTTCAAGGGATGCTaGCTAGAAAAGGAGGTATTC +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKKFKGC*LEKEVF
Trigger: GAATACCTCCTTTTCTAGCCAGCATCCCTTGAACTT...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTAAAAACAGTTACATCTaGTGTGTGAACCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCKNSYI*CVNLGG
Trigger: TCCACCAAGGTTCACACACCAGATGTAACTGTTTTT...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCAAAAACAGTTACATCTaGTGTGTGAACCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSKNSYI*CVNLGG
Trigger: TCCACCAAGGTTCACACACCAGATGTAACTGTTTTT...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp AGGAAAAACTCTCTCGTTATTAGAGTTGCCCAACTTTaGAGTAATAAATGCATAGCCACCAGAGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: RKNSLVIRVAQL*SNKCIATRGYL
Trigger: CAGGTAGCCTCTGGTGGCTATGCATTTATTACTCAAAAGTTGGGCAACTCTAATAACGAGAGAGTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAAGAAATCCGAGGGCTTaGAGAGGAGCGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFARNPRA*RGAIDG
Trigger: TCCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR TCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGCGAGAGAGTATGGTaGCTAAGATTTGTAGTAATA +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAGERVW*LRFVVI
Trigger: TATTACTACAAATCTTAGTCACCATACTCTCTCGCC...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCATCCAAAATAAGCAGATaGATTGGGGAACAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESASKISR*IGEQLK
Trigger: TTTGAGCTGTTCCCCAATTCATCTGCTTATTTTGGA...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTAATGTCTTTAACTTCTaGAGCAAAGATGTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LDANHSRGHLMINSTSCCNVFNF*SKDVRD
Trigger: GTCCCTAACATCTTTGCTTCAGAAGTTAAAGACATT...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTCTAGAAAGTCTTTCATaGCACGTTTCTTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCLESLS*HVSLTS
Trigger: AGAGGTCAAAGAAACGTGGCATGAAAGACTTTCTAG...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCACTAGAAAGTCTTTCATaGCACGTTTCTTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: NCHKTWDRGLEEQGIESALESLS*HVSLTS
Trigger: AGAGGTCAAAGAAACGTGGCATGAAAGACTTTCTAG...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTTTTTATAATCTCTGTTaGTGTCTTCTTCTACACGGC +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSFYNLC*CLLLHG
Trigger: GCCGTGTAGAAGAAGACAGCAACAGAGATTATAAAA...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR GCA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAATCTAGATCAACTCCTTaGTTCTTTACTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKSRSTP*FFTCSR
Trigger: TCTGGAGCAAGTAAAGAAGCAAGGAGTTGATCTAGA...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATATGTGTCTTTCCAGCCTaGTTCCACTTCCTAGTCCAT +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVICVFPA*FHFLVH
Trigger: ATGGACTAGGAAGTGGAAGCAGGCTGGAAAGACACA...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACAGGTAAGAAAAGCATaGCATATGAGGAATGACTTA +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLQVRKA*HMRNDL
Trigger: TAAGTCATTCCTCATATGGCATGCTTTTCTTACCTG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAGCTACTTCTGGCCCTTaGATGTCCCTTATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIATSGP*MSLIQE
Trigger: TTCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGC...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTAAGGACTTGATTTGCTaGTTTCTGAAAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFKDLIC*FLKTLG
Trigger: CCCCAGGGTTTTCAGAAAGCAGCAAATCAAGTCCTT...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCTTGGGATAGGGGTTTaGAAGAACAGGGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFLGIGV*KNRALK
Trigger: TTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAACTGTCATAAAACTTaGGATAGGGGTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TPQSILQMARITTIMLQLNCHKT*DRGLEE
Trigger: TTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCAGAGCATTCTCCAGATaGCTCGAATTACCACAATCA +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSRAFSR*LELPQS
Trigger: TGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCT...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAACACTAAATTACTGTTaGGGCTCGAGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFATLNYC*GSSCRC
Trigger: GCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAAAGAGGAGCGATAGATaGAAGAGCCTCGGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAKRSDR*KSLGPL
Trigger: TAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCTT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTTGTAACCCCTTTCCCTaGTCTATTGAGTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFCNPFP*SIEWKR
Trigger: CCTTTTCCACTCAATAGACCAGGGAAAGGGGTTACA...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGCCAGAATCTCTGGAATaGCCAAATCATTACTTCCAA +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGPESLE*PNHYFQ
Trigger: TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGG...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGCATCTAATAAGCACATaGTTTGGGGAAGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLHLIST*FGEGKW
Trigger: CCATTTCCCTTCCCCAAACCATGTGCTTATTAGATG...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAAAGCTGCCTGCTTATTaGGTTGGAAGAACTCACATC +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQKLPAY*VGRTHI
Trigger: GATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTT...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTAAAGACCATCTTGAATaGTATCAGAACCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSKDHLE*YQNLLL
Trigger: AAGTAGGAGGTTCTGATACCATTCAAGATGGTCTTT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCAATAAGCAGATGAATTaGGGAACAGCTCAAATAGGT +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSNKQMN*GTAQIG
Trigger: ACCTATTTGAGCTGTTCCCCAATTCATCTGCTTATT...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTATGCTACCACTAAAATaGGAGAGGCATGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFMLPLK*ERHGNL
Trigger: GAGGTTTCCATGCCTCTCCCATTTTAGTGGTAGCAT...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCAACCGTATATACTCTTaGTTACTTGAAGCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSNRIYS*LLEAWN
Trigger: GTTCCAAGCTTCAAGTAACCAAGAGTATATACGGTT...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTTTCCAGGCCTGGACATaGTATTTTAAAGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFFQAWT*YFKGWF
Trigger: AAACCAGCCTTTAAAATATCATGTCCAGGCCTGGAA...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTAATGTCTTTAACTTCTaGAGCAAAGATGTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCNVFNF*SKDVRD
Trigger: GTCCCTAACATCTTTGCTTCAGAAGTTAAAGACATT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCAAAATAAGAACCTTCTaGAGCCATTTGAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSKIRTF*SHLSLI
Trigger: GATGAGGCTCAAATGGCTTCAGAAGGTTCTTATTTT...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAGCTGGTGCTGGTATCTaGTCTGTGATACTACTCTTG +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAAGAGI*SVILLL
Trigger: CAAGAGTAGTATCACAGAGCAGATACCAGCACCAGC...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CCA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGATCTGTTTTAGCTGGTaGAGGTTCTTCATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSILQMARITTIMLQLKLICFSW*RFFISS
Trigger: GGAAGAAATGAAGAACCTCCACCAGCTAAAACAGAT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR CCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGAACTGTCATAAAACTTaGGATAGGGGTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGNCHKT*DRGLEE
Trigger: TTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTTGGTTGTGTGGACTCTaGGTTTGTAAACACTGCTTT +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFWLCGL*VCKHCF
Trigger: AAAGCAGTGTTTACAAACCCAGAGTCCACACAACCA...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGCAGAAAATATCACTCTaGCAGATTCATGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGQKISL*QIHGPK
Trigger: TTTTGGACCATGAATCTGCCAGAGTGATATTTTCTG...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCAGTGTATGCTTATTCTaGAAGGACATAAGAGCATCC +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSSVCLF*KDIRAS
Trigger: GGATGCTCTTATGTCCTTCCAGAATAAGCATACACT...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACCTGAATTAAAAGTCTaGGGACTTCAGAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAPELKV*GLQSSP
Trigger: AGGGCTACTCTGAAGTCCTCAGACTTTTAATTCAGG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR TCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACTTTCAGAGTTGGAATaGTTGACAAAGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFALSELE*LTKASG
Trigger: GCCAGAAGCCTTTGTCAATCATTCCAACTCTGAAAG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476364.5
ENST00000480184.5
CDS-3UTR TCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACTGGTATCTGCTCTGTaGTACTACTCTTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFALVSAL*YYSCFQ
Trigger: CTGAAAGCAAGAGTAGTATCACAGAGCAGATACCAG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476364.5
ENST00000480184.5
CDS-3UTR TCA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCTACAAAGTCCTCAGTTaGCTCTTTGCAAATAACTTG +
Preference number: 4 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSYKVLS*LFANNL
Trigger: CAAGTTATTTGCAAAGAGTCAACTGAGGACTTTGTA...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACATACCCTCCCAAACTaGACCTTATCTTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAHTLPN*TLSLLS
Trigger: GGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCTTTTGAGTAATAAATaGATAGCCACCAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFLLSNK*IATRGY
Trigger: GTAGCCTCTGGTGGCTATGCATTTATTACTCAAAAG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGGAAAATTTTCTTGCTaGTGTAAGGCAGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFGKFSC*CKAEFK
Trigger: CTTGAACTCTGCCTTACAGCAGCAAGAAAATTTTCC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp ACTACTCTTGCTTTCAGAGTTGGAATGATTGACAAAGGCTTCTGGCTTTTTATCTCTAGATCAACTCTCTaGTATGTTGAGATAGCCACA +
Preference number: 4 (lower is better)
Translates to: TTLAFRVGMIDKGFWLFISRSTL*YVEIAT
Trigger: TGTGGCTATCTCAACATAGCAGAGAGTTGATCTAGA...GATAAAAAGCCAGAAGCCTTTGTCAATCATTCCAACTCTGAAAGCAAGAGTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CCA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGAACTGTCATAAAACTTaGGATAGGGGTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLNCHKT*DRGLEE
Trigger: TTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATCACTCAGCATGTTGTaGCTGCCAGTTTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFASLSML*LPVFLS
Trigger: ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAAAGTCAGCTTTAACATaGAAGGGTCATGTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIKSALT*KGHVKW
Trigger: CCACTTCACATGACCCTTCCATGTTAAAGCTGACTT...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAATAATTACCATCTCATaGGGCTTCCAGACAATACAG +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQIITIS*GFQTIQ
Trigger: CTGTATTGTCTGGAAGCCCCATGAGATGGTAATTAT...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAGCCTGCTTATTGGGTTaGAAGAACTCACATCTTATG +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIACLLG*KNSHLM
Trigger: CATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGC...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp TCTCCCTTATGTGGACTCTTGTTCTTGTCTGATCTCTaGTCAAATTGTTATTTTGTAATGAACTGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SPLCGLLFLSDL*SNCYFVMNCVS
Trigger: GGAGACGCAGTTCATTACAAAATAACAATTTGACAAGAGATCAGACAAGAACAAGAGTCCACATAAGGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATCAGATCTGACTCAATaGGTTTATTCCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFASDLTQ*VYSVSP
Trigger: AGGAGACACGGAATAAACTCATTGAGTCAGATCTGA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR TCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCTCTCATCAATGGGTTaGAAGTACTTCATTCCATTA +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFLSSMG*KYFIPL
Trigger: TAATGGAATGAAGTACTTTCAACCCATTGATGAGAG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTAGTAGCAGCTTCTCTTaGAAAATGGTTGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFSSSFS*KMVGNE
Trigger: TTCATTTCCAACCATTTTTCAAGAGAAGCTGCTACT...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR TCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATATCCTTATTAAAGAAATaGGCTGAAAGAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVISLLKK*AERNLG
Trigger: CCCCAGGTTTCTTTCAGCTCATTTCTTTAATAAGGA...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATACTAGAAAGTCTTTCATaGCACGTTTCTTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: HSPDGSNYHNHASIKTVILESLS*HVSLTS
Trigger: AGAGGTCAAAGAAACGTGGCATGAAAGACTTTCTAG...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CCA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTACATCAAATGGTGTCTaGCCCAGTTTATTTCGAATA +
Preference number: 4 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFTSNGV*PSLFRI
Trigger: TATTCGAAATAAACTGGGCCAGACACCATTTGATGT...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAATCTTTGGGCTCTTCTaGCTTGTTAAAAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAIFGLF*LVKKAR
Trigger: TCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGAT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAACAGAAAATATCACTCTaGCAGATTCATGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQQKISL*QIHGPK
Trigger: TTTTGGACCATGAATCTGCCAGAGTGATATTTTCTG...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAACAGGTGTATTTACAGTaGACTGAAGTTAATCCATAC +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQQVYLQ*TEVNPY
Trigger: GTATGGATTAACTTCAGTCCACTGTAAATACACCTG...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CCA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAAAACCGTATATACTCTTaGTTACTTGAAGCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQNRIYS*LLEAWN
Trigger: GTTCCAAGCTTCAAGTAACCAAGAGTATATACGGTT...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp ACCTTCAATAGCCCCCAAGTTAACTACATTTGTAGTTaGGAACTACAGGATAGTTTTGGATCTCCTGAATTA +
Preference number: 4 (lower is better)
Translates to: TFNSPQVNYICS*ELQDSFGSPEL
Trigger: TAATTCAGGAGATCCAAAACTATCCTGTAGTTCCAAACTACAAATGTAGTTAACTTGGGGGCTATTGAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
3UTR CAA 72 bp CAATGCTCTCCATCTCCCTTATGTGGACTCTTGTTCTaGTCTGATCTCTTGTCAAATTGTTATTTTGTAATG +
Preference number: 4 (lower is better)
Translates to: QCSPSPLCGLLF*SDLLSNCYFVM
Trigger: CATTACAAAATAACAATTTGACAAGAGATCAGACAAGAACAAGAGTCCACATAAGGGAGATGGAGAGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATCTAGATCAACTCCTTaGTTCTTTACTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFASRSTP*FFTCSR
Trigger: TCTGGAGCAAGTAAAGAAGCAAGGAGTTGATCTAGA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000480184.5
CDS-3UTR CCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAATTGACAAAGGCTTCTaGCTTTTTATCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAIDKGF*LFICLL
Trigger: AAGGAGGCAGATAAAAAGCCAGAAGCCTTTGTCAAT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476364.5
ENST00000480184.5
CDS-3UTR TCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAAAGCAAATAGCTACTTaGATAAACTATCAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAKQIAT*INYQCA
Trigger: GGCACACTGATAGTTTATTCAAGTAGCTATTTGCTT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAACATCAAATGGTGTCTaGCCCAGTTTATTTCGAATA +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFATSNGV*PSLFRI
Trigger: TATTCGAAATAAACTGGGCCAGACACCATTTGATGT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
3UTR CAA 72 bp GTCTTCCAAGAAATAACCGTATATACTCTTGGTTACTaGAAGCTTGGAACCTTGATATCTATCTATCTATCT +
Preference number: 4 (lower is better)
Translates to: VFQEITVYTLGY*KLGTLISIYLS
Trigger: AGATAGATAGATAGATATCAAGGTTCCAAGCTTCAAGTAACCAAGAGTATATACGGTTATTTCTTGGAAGAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR GCA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAAATAAACTATCAGTGTaGCTCTCTCTCTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFANKLSV*LSLFKD
Trigger: GTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS GCA 90 bp TCCGCAGGCTCCTGCTCTGTCAGCGAGCCCCGCCAGCGCCGAAGCTaGTCTGCCCGCCGCATTCGCGCCGACTCTGCCCGCTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SAGSCSVSEPRQRRS*SARRIRADSARFPP
Trigger: AGGAGGGAAGCGGGCAGAGTCGGCGCGAATGCGGCGGGCAGAGCAGCTTCGGCGCTGGCGGGGCTCGCTGACAGAGCAGGAGCCTGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS GCA 90 bp TCTGCCCGCCGCATTCGCGCCGACTCTGCCCGCTTCCCTCCTAGGTaGTCCAGTTCCGCCATTGCTCCGGCCTCGGCAGCTGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: SARRIRADSARFPPR*SSSAIAPASAAAAK
Trigger: TTTGGCAGCAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAGCACCTAGGAGGGAAGCGGGCAGAGTCGGCGCGAATGCGGCGGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTCCTCTTCGTCGTTCCTaGGGCCGCCTCCTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLPLRRS*GRLLSR
Trigger: CCGAGAGAGGAGGCGGCCCAAGGAACGACGAAGAGG...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGCCTCTTCGTCGTTCCTaGGGCCGCCTCCTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSPLRRS*GRLLSR
Trigger: CCGAGAGAGGAGGCGGCCCAAGGAACGACGAAGAGG...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS CCA 90 bp ACTAGAGCTCCTGGGTGTCCGAGGACTCGATGGACTCCGAGAGTCTaGCCACCACTCGGGTCAGGGCCCTGTTCTCAGCCTGCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: TRAPGCPRTRWTPRV*PPLGSGPCSQPAVA
Trigger: AGCAACTGCAGGCTGAGAACAGGGCCCTGACCCGAGTGGTGGCCAGACTCTCGGAGTCCATCGAGTCCTCGGACACCCAGGAGCTCTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290419.9
ENST00000618451.1
CDS-3UTR CAA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTCAGAAATCCGAGGGCTaGAAGAGGAGCGATAGATGG +
Preference number: 5 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLQKSEG*KRSDRW
Trigger: CCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCTG...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTTTGCACTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGGCAAGAAGAGGCAGGTaGCCACTGGCTGCCCCGAGA +
Preference number: 5 (lower is better)
Translates to: VCTDWCRARRGRLPLAAPARRGR*PLAAPR
Trigger: TCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGC...CGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS CCA 90 bp AGAGTAGGGGCAAGAACTAGAGCTCCTGGGTGTCCGAGGACTCGATaGACTCCGAGAGTCTGGCCACCACTCGGGTCAGGGCCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RVGARTRAPGCPRTR*TPRVWPPLGSGPCS
Trigger: AGAACAGGGCCCTGACCCGAGTGGTGGCCAGACTCTCGGAGTCCATCGAGTCCTCGGACACCCAGGAGCTCTAGTTCTTGCCCCTACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290419.9
ENST00000618451.1
CDS-3UTR CAA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCCTCCTGCTGGAGATTaGGCCTCCCTTGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFPPAGD*ASLGSS
Trigger: GGAGGAGCCAAGGGAGGCCAAATCTCCAGCAGGAGG...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS CCA 90 bp CGGCCTCGGCAGCTGCTGCCAAAACTACCAACACTAAATTACTGTTaGGGCTCGAGTTGCCGCTGCCGCCTCTCTCAGAGCGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RPRQLLPKLPTLNYC*GSSCRCRLSQSASA
Trigger: GGCTGAAGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGGTAGTTTTGGCAGCAGCTGCCGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCCTGAGCAGCAGGAAGTaGAGGGGTCCACAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSLSSRK*RGPQLS
Trigger: GCTCAGCTGTGGACCCCTCAACTTCCTGCTGCTCAG...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTTTCTTTTCACCCCTGTaGATCAAGGTCAGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLFFSPL*IKVRAK
Trigger: CTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAA...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAATGGTGCCGGGGAACATaGTCTGGGAGGCTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKWCRGT*SGRLGG
Trigger: CCCGCCCAGCCTCCCAGACAATGTTCCCCGGCACCA...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTGGGGGAAGACCAGATaGGCACTCTGGTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKWGKTR*ALWWVL
Trigger: CAGCACCCACCAGAGTGCCAATCTGGTCTTCCCCCA...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGAACACATGTACAGCCCTaGCCCCCGGCCCTCTCATTC +
Preference number: 5 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGTHVQP*PPALSF
Trigger: GAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGT...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTGCCCTGAAGGCCTGTTaGCTGCACATCTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLALKAC*LHICLQ
Trigger: CTGCAGGCAGATGTGCAGCAAACAGGCCTTCAGGGC...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS GCA 90 bp CTGCTGCCAAAACTACCAACACTAAATTACTGTTGGGGCTCGAGTTaGCGCTGCCGCCTCTCTCAGAGCGCTTCAGCCCGGAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LLPKLPTLNYCWGSS*RCRLSQSASARSRG
Trigger: CCCTCTGCTCCGGGCTGAAGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGGTAGTTTTGGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CCTTATAGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTCTGTTGGGGCTCGAGTaGCCGCTGCCGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PYRFPGIGHLTQHVVAASLLGLE*PLPPLS
Trigger: TGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAG...ACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTATAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp AGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTGCTCCAGTTCCGCCATaGCTCCGGCCTCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RFPGIGHLTQHVVAASFSAPVPP*LRPRQL
Trigger: CAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAGC...AGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGACCAGGGATTTCCGCTaGGCAGGAAACACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWETRDFR*AGNTGL
Trigger: CAGCCCTGTGTTTCCTGCCAAGCGGAAATCCCTGGT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAAGAGAGTGGGACAGCATaGCCCCCAAAGACCAGGGAA +
Preference number: 5 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLEESGTA*PPKTRE
Trigger: TTCCCTGGTCTTTGGGGGCAATGCTGTCCCACTCTC...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTTGTGGGGACTATATTCTaGAATTCCCTTCCAGTAGAG +
Preference number: 5 (lower is better)
Translates to: GFRWGLRRCPCWPCPSWLVGTIF*NSLPVE
Trigger: CTCTACTGGAAGGGAATTCAAGAATATAGTCCCCAC...AAGCCAGCTCGGGCAGGGCCAGCATGGGCATCTCCTGAGACCCCACCGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAACAGTCCAGCCCTGCCTaGGGAGATGCTGGAGGACCC +
Preference number: 5 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKQSSPA*GDAGGP
Trigger: GGGTCCTCCAGCATCTCCCAAGGCAGGGCTGGACTG...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCGCCCAGCCAGGTGGATaGCTTGAGCCCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASAQPGG*LEPSSF
Trigger: GAAGCTGCTGGGCTCAAGCAATCCACCTGGCTGGGC...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTCTTCCTTCCCAGTACTaGCAGCTTCCACCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLLPSQY*QLPPCS
Trigger: AGAGCAGGGTGGAAGCTGCAAGTACTGGGAAGGAAG...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACCTCCTGCTGGAGATTaGGCCTCCCTTGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPPPAGD*ASLGSS
Trigger: GGAGGAGCCAAGGGAGGCCAAATCTCCAGCAGGAGG...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATCCATTTCTGACATTTaGCGCTCCAAGGCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLESISDI*RSKARL
Trigger: GAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGGA...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAACTGAGCAGCAGGAAGTaGAGGGGTCCACAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQLSSRK*RGPQLS
Trigger: GCTCAGCTGTGGACCCCTCAACTTCCTGCTGCTCAG...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATGACCTGAGCCCCATGTaGTTGGCCATGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDDLSPM*LAMSAA
Trigger: AGCTGCAGACATGGCCAACAACATGGGGCTCAGGTC...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTTCCTTTTTGCACCTTaGGAGGTGCAAAGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLFLFAP*EVQSRL
Trigger: CAGGCGGCTTTGCACCTCCAAAGGTGCAAAAAGGAA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTGTAATCCTATCGCTTaGGGAGGCCCAGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDCNPIA*GGPARW
Trigger: CCACCTGGCTGGGCCTCCCAAAGCGATAGGATTACA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTTCTTTGCCTCTGTTTaGTGCCCCAGGACAGGACTG +
Preference number: 5 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLFFASV*CPRTGL
Trigger: CAGTCCTGTCCTGGGGCACAAAACAGAGGCAAAGAA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTGGCTAGATGTGTGCTaGTCCATCAGGTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFWLDVC*SIRSKG
Trigger: GCCTTTGGACCTGATGGACAAGCACACATCTAGCCA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATAAGTCCCAGGGACCTTaGTGCTGGGAACTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHKSQGP*CWELKE
Trigger: CTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTT...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS CCA 90 bp GGTAGCCCAGCTGAGGTCTCTCTCACTGCCTCCCTTGACCTAGGCTaGTATGTCCCATTCTATGATCTCAGTCCTGGCTGCTTCCATCTG +
Preference number: 5 (lower is better)
Translates to: GSPAEVSLTASLDLG*YVPFYDLSPGCFHL
Trigger: CAGATGGAAGCAGCCAGGACTGAGATCATAGAATGGGACATACCAGCCTAGGTCAAGGGAGGCAGTGAGAGAGACCTCAGCTGGGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGAACACTAAATTACTGTaGGGGCTCGAGTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKNTKLL*GLELPL
Trigger: CAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTT...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCAACACTAAATTACTGTaGGGGCTCGAGTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFNTKLL*GLELPL
Trigger: CAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTT...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAAGCTCCAGTTCCGCCATaGCTCCGGCCTCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PISTSAGFNILTKPAGGKAPVPP*LRPRQL
Trigger: CAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAGC...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAGATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCGCTCCAGTTCCGCCATaGCTCCGGCCTCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GDSSLGSSGLLKRPEENLAPVPP*LRPRQL
Trigger: CAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAGC...GAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CAA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAAACCTCACTCAGCATGTaGTGGCTGCCAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLETSLSM*WLPVFL
Trigger: GAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGT...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAAATATCACTTGTGCTGTaGAGCTTCCGGGGTGCTAGT +
Preference number: 5 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLEISLVL*SFRGAS
Trigger: ACTAGCACCCCGGAAGCTCAACAGCACAAGTGATAT...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGAGCTATTTATTCAGCTaGAGCTGCCTGGGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKSYLFS*SCLGCS
Trigger: TGAGCACCCCAGGCAGCTCAAGCTGAATAAATAGCT...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCATAAACAATGGGGTTaGAGGGCCCCTGATGATATC +
Preference number: 5 (lower is better)
Translates to: PVNTGADALPSCILLQSDHKQWG*RAPDDI
Trigger: GATATCATCAGGGGCCCTCAAACCCCATTGTTTATG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATCTGAATCCTTGCTCTTaGAATGGGCTGAGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHLNPCS*NGLSCC
Trigger: GCAACAGCTCAGCCCATTCAAAGAGCAAGGATTCAG...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGCTACTTCTGGCCCTaGCATGTCCCTTATTCAGGA +
Preference number: 5 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSSYFWP*HVPYSG
Trigger: TCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGCT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTCTGCAGGGAAATCATaGCCCTGGTGTGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASSAGKS*PWCASQ
Trigger: CTGGCTGGCACACCAGGGCAATGATTTCCCTGCAGA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAGGTGGCGAGGCAGGCTaGCCCTGCACAAACCACAAC +
Preference number: 5 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGGGEAG*PCTNHN
Trigger: GTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACC...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGCCTCCCGACGGGCTCTaGCTGAAGCCCGGTCACCGT +
Preference number: 5 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQPPDGL*LKPGHR
Trigger: ACGGTGACCGGGCTTCAGCAAGAGCCCGTCGGGAGG...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGTCTTTCAGCCTCTGGTaGTCGGATTTCAGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSSFSLW*SDFSSV
Trigger: AACAGAACTGAAATCCGACAACCAGAGGCTGAAAGA...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAGATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCCTGTTGGGGCTCGAGTaGCCGCTGCCGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GDSSLGSSGLLKRPEENLLLGLE*PLPPLS
Trigger: TGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAG...GAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCATAGGTTCCCTGGAATaGGCCACCTCACTCAGCATG +
Preference number: 5 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGIGSLE*ATSLSM
Trigger: CATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATAGTGGCCTCAGATACTaGACTTTCGCCATATGTGTC +
Preference number: 5 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHSGLRY*TFAICV
Trigger: GACACATATGGCGAAAGTCAAGTATCTGAGGCCACT...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAAACACATCCTGCAGTaGGAAGACAGGGAGGTTCTA +
Preference number: 5 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSKHILQ*EDREVL
Trigger: TAGAACCTCCCTGTCTTCCAACTGCAGGATGTGTTT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCGAATGGGCTGAGCTGTaGCCACCAGATGCACTGATA +
Preference number: 5 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGEWAEL*PPDALI
Trigger: TATCAGTGCATCTGGTGGCAACAGCTCAGCCCATTC...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATTCTTTTCACCCCTGTaGATCAAGGTCAGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGFFSPL*IKVRAK
Trigger: CTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCATGGCCTCAACACCTTaGTCACTTAAACCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSMASTP*SLKPGV
Trigger: GACACCAGGTTTAAGTGACAAAGGTGTTGAGGCCAT...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTGGCTAGATGTGTGCTaGTCCATCAGGTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDWLDVC*SIRSKG
Trigger: GCCTTTGGACCTGATGGACAAGCACACATCTAGCCA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCCCTCCAGGAACACCGTaGGCTAGATGTGTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASPPGTP*ARCVLV
Trigger: GACAAGCACACATCTAGCCAACGGTGTTCCTGGAGG...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACCTCCAGGAACACCGTaGGCTAGATGTGTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPPPGTP*ARCVLV
Trigger: GACAAGCACACATCTAGCCAACGGTGTTCCTGGAGG...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATACCTGTCTCCTCTCCTaGAGGATAGACCAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDTCLLS*RIDQQL
Trigger: TAGCTGCTGGTCTATCCTCAAGGAGAGGAGACAGGT...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACAGAAGCCCCAGCCAGTaGCACCAAGTAGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: KPDMATHGLLGQAMEESYRSPSQ*HQVAEV
Trigger: CACCTCTGCTACTTGGTGCAACTGGCTGGGGCTTCT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS CCA 90 bp CTGCCCTTGGTTACCCAAGGCCCAACCCCAGTTGCTCCAGGGGAGTaGGTTGGACTTGGGTTGCTATTGGCTAAGAAAGATCAATTTCCA +
Preference number: 5 (lower is better)
Translates to: LPLVTQGPTPVAPGE*VGLGLLLAKKDQFP
Trigger: TGGAAATTGATCTTTCTTAGCCAATAGCAACCCAAGTCCAACCCACTCCCCTGGAGCAACTGGGGTTGGGCCTTGGGTAACCAAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACCTCTTCGTCGTTCCTaGGGCCGCCTCCTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLPLRRS*GRLLSR
Trigger: CCGAGAGAGGAGGCGGCCCAAGGAACGACGAAGAGG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCCCTCTTCGTCGTTCCTaGGGCCGCCTCCTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: DANHSRGHLMINSTSCCFPLRRS*GRLLSR
Trigger: CCGAGAGAGGAGGCGGCCCAAGGAACGACGAAGAGG...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATCCATTTCTGACATTTaGCGCTCCAAGGCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPSISDI*RSKARL
Trigger: GAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGGA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTCTTTCAGCCTCTGGTaGTCGGATTTCAGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLSFSLW*SDFSSV
Trigger: AACAGAACTGAAATCCGACAACCAGAGGCTGAAAGA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGCAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTTTCAGCCTCTGGTaGTCGGATTTCAGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SSRKLRGPQLSLVYSPEHSFSLW*SDFSSV
Trigger: AACAGAACTGAAATCCGACAACCAGAGGCTGAAAGA...ATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTGGAGCCTAGCCTACTaGGACAGTTTGCTGATGACT +
Preference number: 5 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDWSLAY*DSLLMT
Trigger: AGTCATCAGCAAACTGTCCAAGTAGGCTAGGCTCCA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAAACATCCATTTCTTTaGGTTGGAAGGCAAGGACTG +
Preference number: 5 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSKHPFL*VGRQGL
Trigger: CAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTTT...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAATCCTGCTGTTTCTCTaGGCACCCCAATCAGGATCC +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPILLFL*APQSGS
Trigger: GGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGAT...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAATCCTGCTGTTTCTCTaGGCACCCCAATCAGGATCC +
Preference number: 5 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQILLFL*APQSGS
Trigger: GGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGAT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACTGTTGGGGCTCGAGTaGCCGCTGCCGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLLLGLE*PLPPLS
Trigger: TGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAGCTCCAGTTCCGCCATaGCTCCGGCCTCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKAPVPP*LRPRQL
Trigger: CAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAGC...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGAGGAGCGATAGATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATTGGCATAGGTTCCCTGGAATaGGCCACCTCACTCAGCATG +
Preference number: 5 (lower is better)
Translates to: RGAIDGRASVPYRFPGIGIGSLE*ATSLSM
Trigger: CATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT...GCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAGAAATCCGAGGGCTaGAAGAGGAGCGATAGATGG +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPQKSEG*KRSDRW
Trigger: CCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCTG...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGTTCTTTGTCACAATGTaGCAAGTGGCCTCAGATACT +
Preference number: 5 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSFFVTM*QVASDT
Trigger: AGTATCTGAGGCCACTTGCAACATTGTGACAAAGAA...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGAGTGCCGTTAAAGAGTaGCAGATAGTAGATCTGGAC +
Preference number: 5 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWESAVKE*QIVDLD
Trigger: GTCCAGATCTACTATCTGCAACTCTTTAACGGCACT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGCAGGAGGGAAAGCCATaGCAACATCATTCAATTACC +
Preference number: 5 (lower is better)
Translates to: AVLHGKSPGCLRPGNCDKQEGKP*QHHSIT
Trigger: GGTAATTGAATGATGTTGCAATGGCTTTCCCTCCTG...CTTGTCACAGTTGCCAGGCCTGAGGCATCCTGGGCTCTTCCCATGCAGTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTTGGTGCCGGGGAACATaGTCTGGGAGGCTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCWCRGT*SGRLGG
Trigger: CCCGCCCAGCCTCCCAGACAATGTTCCCCGGCACCA...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATACACATGTACAGCCCTaGCCCCCGGCCCTCTCATTC +
Preference number: 5 (lower is better)
Translates to: AVTVTLDANHSRGHLMINTHVQP*PPALSF
Trigger: GAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGT...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAAAAGTCCCAGGGACCTTaGTGCTGGGAACTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKKSQGP*CWELKE
Trigger: CTCTTTCAGTTCCCAGCACAAAGGTCCCTGGGACTT...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACAGTCCAGCCCTGCCTaGGGAGATGCTGGAGGACCC +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLQSSPA*GDAGGP
Trigger: GGGTCCTCCAGCATCTCCCAAGGCAGGGCTGGACTG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGGTTGAGGCTGCTCCTTaGATTTTATGTCGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: RGPQLSLVYSPEHSPDGSVEAAP*ILCRVK
Trigger: CTTTACACGACATAAAATCAAAGGAGCAGCCTCAAC...CGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTTTGCACTGATTGGTGCAGGGCAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGTTCTCTGCACCAAACTaGCGAGTTTCACATCTTGAT +
Preference number: 5 (lower is better)
Translates to: VCTDWCRARRGRLPLAAPFSAPN*RVSHLD
Trigger: ATCAAGATGTGAAACTCGCAAGTTTGGTGCAGAGAA...CGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGCCCTGCACCAATCAGTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS CCA 90 bp CTGCCTGCCATATCCTTTGCAAAGCTGGCCTCATTAGAGAGGGCCTaGCTCCATGAGGGTCTCATTTATATAGGCTGTGTTCTGCCTCAC +
Preference number: 5 (lower is better)
Translates to: LPAISFAKLASLERA*LHEGLIYIGCVLPH
Trigger: GTGAGGCAGAACACAGCCTATATAAATGAGACCCTCATGGAGCCAGGCCCTCTCTAATGAGGCCAGCTTTGCAAAGGATATGGCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAGCCTACTTGGACAGTTaGCTGATGACTCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPAYLDS*LMTLMR
Trigger: CCTCATCAGAGTCATCAGCAAACTGTCCAAGTAGGC...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATGGAGCCTAGCCTACTaGGACAGTTTGCTGATGACT +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPWSLAY*DSLLMT
Trigger: AGTCATCAGCAAACTGTCCAAGTAGGCTAGGCTCCA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCTGGAAGAACAGGGCATaGAAAGTGCAGAGAAAATGT +
Preference number: 5 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSWKNRA*KVQRKC
Trigger: ACATTTTCTCTGCACTTTCAATGCCCTGTTCTTCCA...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCATCCACGTTGACCGTGTaGATATCAGCACCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: VPWNWPPHSACCGCQFFSSTLTV*ISAPLA
Trigger: GGCAAGAGGTGCTGATATCAACACGGTCAACGTGGA...TGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGGTCAAGCCGTCCACGTaGACCGTGTTGATATCAGCA +
Preference number: 5 (lower is better)
Translates to: IERLNAVTVTLDANHSRGVKPST*TVLISA
Trigger: TGCTGATATCAACACGGTCAACGTGGACGGCTTGAC...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCTTGGGCTCTTCTGGCTaGTTAAAAAGGCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGLGSSG*LKRPEE
Trigger: CTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAA...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATTTGGGCTCTTCTGGCTaGTTAAAAAGGCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: VCLSIRSKGMGAVNASRDLGSSG*LKRPEE
Trigger: CTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAA...ATCCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCCACTTTTCAAGTAAGTaGATACATAGGTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSHFSSK*IHRWRE
Trigger: CTCCCTCCACCTATGTATCAACTTACTTGAAAAGTG...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR CAA 90 bp CAAGAAGAGGCAGGTTGCCACTGGCTGCCCCGAGAGGTAGATGAACCAATGGTACTGAAATGTAGGGACTaGTGGGGTCACTACTTCTAC +
Preference number: 5 (lower is better)
Translates to: QEEAGCHWLPREVDEPMVLKCRD*WGHYFY
Trigger: GTAGAAGTAGTGACCCCACAAGTCCCTACATTTCAG...TACCATTGGTTCATCTACCTCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS-3UTR CAA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCGCAAGAAGAGGCAGGTaGCCACTGGCTGCCCCGAGA +
Preference number: 5 (lower is better)
Translates to: DANHSRGHLMINSTSCCFARRGR*PLAAPR
Trigger: TCTCGGGGCAGCCAGTGGCAACCTGCCTCTTCTTGC...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTTCTTTGTCACAATGTaGCAAGTGGCCTCAGATACT +
Preference number: 5 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLFFVTM*QVASDT
Trigger: AGTATCTGAGGCCACTTGCAACATTGTGACAAAGAA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACAGAGTTGCCCAACTTTaGAGTAATAAATGCATAGCC +
Preference number: 5 (lower is better)
Translates to: PVNTGADALPSCILLQSDRVAQL*SNKCIA
Trigger: GGCTATGCATTTATTACTCAAAAGTTGGGCAACTCT...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGAATTTTGCACTGGATTaGTATTCTTTCCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWENFALD*YSFQAW
Trigger: CCAGGCCTGGAAAGAATACAAATCCAGTGCAAAATT...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCCCTTTCCCTGGTCTATaGAGTGGAAAAGGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGPFPGL*SGKGSR
Trigger: TCTTGACCCTTTTCCACTCAATAGACCAGGGAAAGG...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGTTCCTTTTTGCACCTTaGGAGGTGCAAAGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: IERLNAVTVTLDANHSRGFLFAP*EVQSRL
Trigger: CAGGCGGCTTTGCACCTCCAAAGGTGCAAAAAGGAA...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAATAGTGGGCCCCGACGACTGGCACTCCGACTCTCAACTCTGGTTTTGGGAGTGCCTGCTTATTGGGTaGGAAGAACTCACATCTTAT +
Preference number: 5 (lower is better)
Translates to: GIVGPDDWHSDSQLWFWECLLIG*EELTSY
Trigger: ATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGCA...CTCCCAAAACCAGAGTTGAGAGTCGGAGTGCCAGTCGTCGGGGCCCACTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAAGGACACATGTACAGCCCTTGCCCCCGGCCCTCTCATTCCCACTTCTGCTTTTTAATGTTGCCTTTTaGTCCTCAAAGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GRTHVQPLPPALSFPLLLFNVAF*SSKLPA
Trigger: AGCAGGCAGCTTTGAGGACAAAAAGGCAACATTAAA...AAGCAGAAGTGGGAATGAGAGGGCCGGGGGCAAGGGCTGTACATGTGTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTTTAATGTTGCCTTTTaGTCCTCAAAGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFFNVAF*SSKLPA
Trigger: AGCAGGCAGCTTTGAGGACAAAAAGGCAACATTAAA...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCTTTGTAAACACTGCTTaGGTAGTCTCCTCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: QEVEGSTAEPGVLPRAFSFVNTA*VVSSSD
Trigger: GTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAA...GGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGGAATGGGCTGAGCTGTaGCCACCAGATGCACTGATA +
Preference number: 5 (lower is better)
Translates to: IERLNAVTVTLDANHSRGEWAEL*PPDALI
Trigger: TATCAGTGCATCTGGTGGCAACAGCTCAGCCCATTC...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAACTGAATCCTTGCTCTTaGAATGGGCTGAGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKLNPCS*NGLSCC
Trigger: GCAACAGCTCAGCCCATTCAAAGAGCAAGGATTCAG...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCTGACCATTTAGGAAATTCCTaGATACTACCAGAGACCCTT +
Preference number: 5 (lower is better)
Translates to: PVNTGADALPSCILLQSDHLGNS*ILPETL
Trigger: AAGGGTCTCTGGTAGTATCAAGGAATTTCCTAAATG...GTCAGACTGCAGGAGGATGCACGAGGGAAGAGCGTCAGCCCCTGTATTCACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGACCTGTCTCCTCTCCTaGAGGATAGACCAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: IERLNAVTVTLDANHSRGTCLLS*RIDQQL
Trigger: TAGCTGCTGGTCTATCCTCAAGGAGAGGAGACAGGT...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCCCTCTCTCCTGGGGTaGGGGGAAGACCAGATTGGC +
Preference number: 5 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSPSLLG*GEDQIG
Trigger: GCCAATCTGGTCTTCCCCCAACCCCAGGAGAGAGGG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCATGGTTCTGGATGCCCATCTAAGGACTaGATTTGCTGCTTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: SISTLGEEQTAVGLHGSGCPSKD*ICCFLK
Trigger: TTTCAGAAAGCAGCAAATCAAGTCCTTAGATGGGCA...TCCAGAACCATGGAGTCCCACTGCTGTCTGCTCCTCGCCCAGCGTAGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS TCA 90 bp CATATCCTTTGCAAAGCTGGCCTCATTAGAGAGGGCCTGGCTCCATaGGGGTCTCATTTATATAGGCTGTGTTCTGCCTCACAGCCCACA +
Preference number: 5 (lower is better)
Translates to: HILCKAGLIREGLAP*GSHLYRLCSASQPT
Trigger: TGTGGGCTGTGAGGCAGAACACAGCCTATATAAATGAGACCCTCATGGAGCCAGGCCCTCTCTAATGAGGCCAGCTTTGCAAAGGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGGTTCTCAGCCTGCAGTaGCTCGTTCATCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: IERLNAVTVTLDANHSRGVLSLQ*LVHLLQ
Trigger: TTGAAGCAGATGAACGAGCAACTGCAGGCTGAGAAC...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACTGAGCAGCAGGAAGTaGAGGGGTCCACAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLLSSRK*RGPQLS
Trigger: GCTCAGCTGTGGACCCCTCAACTTCCTGCTGCTCAG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCCTGTTGGGGCTCGAGTaGCCGCTGCCGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSLLGLE*PLPPLS
Trigger: TGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAG...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTAACACTAAATTACTGTaGGGGCTCGAGTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: SLELATSLSMLWLPVFLSNTKLL*GLELPL
Trigger: CAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTT...ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGCAGAGAAGGTATTTaGAGCTGGTGCTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: KPDMATHGLLGQAMEESYGREGI*SWCWYL
Trigger: CAGATACCAGCACCAGCTCAAAATACCTTCTCTGCC...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAACTGAAATGTAGGGACTaGTGGGGTCACTACTTCTAC +
Preference number: 5 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKLKCRD*WGHYFY
Trigger: GTAGAAGTAGTGACCCCACAAGTCCCTACATTTCAG...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS-3UTR CAA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGGACCTGAGCCCCATGTaGTTGGCCATGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKDLSPM*LAMSAA
Trigger: AGCTGCAGACATGGCCAACAACATGGGGCTCAGGTC...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCCTTCTTCCATCATCTTaGGCTCAATTAAATGCCTCT +
Preference number: 5 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFLLPSS*AQLNAS
Trigger: AGAGGCATTTAATTGAGCCAAAGATGATGGAAGAAG...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAACAGTCTAGGAACCCTTaGCATCGGTCATGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQQSRNP*HRSCFF
Trigger: AAAGAAGCATGACCGATGCAAAGGGTTCCTAGACTG...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCAAACATCTATCCTGTCTaGCTGCTTCAGTCCCTAAGG +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPNIYPV*LLQSLR
Trigger: CCTTAGGGACTGAAGCAGCAAGACAGGATAGATGTT...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCTGGGGGAAGACCAGATaGGCACTCTGGTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSWGKTR*ALWWVL
Trigger: CAGCACCCACCAGAGTGCCAATCTGGTCTTCCCCCA...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCACCCTCTCTCCTGGGGTaGGGGGAAGACCAGATTGGC +
Preference number: 5 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAPSLLG*GEDQIG
Trigger: GCCAATCTGGTCTTCCCCCAACCCCAGGAGAGAGGG...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAGGTGGCGAGGCAGGCTaGCCCTGCACAAACCACAAC +
Preference number: 5 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKGGEAG*PCTNHN
Trigger: GTTGTGGTTTGTGCAGGGCAAGCCTGCCTCGCCACC...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGGCCCTGAAGGCCTGTTaGCTGCACATCTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQALKAC*LHICLQ
Trigger: CTGCAGGCAGATGTGCAGCAAACAGGCCTTCAGGGC...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCATCCATTTCTTTTGGTaGGAAGGCAAGGACTGGAAA +
Preference number: 5 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGIHFFW*EGKDWK
Trigger: TTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGAT...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGGTTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTTTGGGCTCTTCTGGCTaGTTAAAAAGGCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: RFPGIGHLTQHVVAASFSLGSSG*LKRPEE
Trigger: CTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAA...AGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp TTCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTTGGGCTCTTCTGGCTaGTTAAAAAGGCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: FPGIGHLTQHVVAASFSQLGSSG*LKRPEE
Trigger: CTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAA...CTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp AGAGGAGCGATAGATGGAAGAGCCTCGGTCCCTTATAGGTTCCCTGGAATTGGCGAAGGAGATTCATCTTaGGGCTCTTCTGGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: RGAIDGRASVPYRFPGIGEGDSS*GSSGLL
Trigger: TAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTC...GCCAATTCCAGGGAACCTATAAGGGACCGAGGCTCTTCCATCTATCGCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp TGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCCAGGGCAGAGAAGGTATTTaGAGCTGGTGCTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: CLGIPPYPPKLHLIFVVQGREGI*SWCWYL
Trigger: CAGATACCAGCACCAGCTCAAAATACCTTCTCTGCC...CTGGACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CAA 90 bp GGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAAACTCTCATCAATGGGTaGAAAGTACTTCATTCCATT +
Preference number: 5 (lower is better)
Translates to: GSTAEPGVLPRAFSRWLETLING*KVLHSI
Trigger: AATGGAATGAAGTACTTTCAACCCATTGATGAGAGT...TTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGCAGGAAGTTGAGGGGTCCACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCACTCTCATCAATGGGTaGAAAGTACTTCATTCCATT +
Preference number: 5 (lower is better)
Translates to: QQEVEGSTAEPGVLPRAFTLING*KVLHSI
Trigger: AATGGAATGAAGTACTTTCAACCCATTGATGAGAGT...GAATGCTCTGGGGAGTACACCAGGCTCAGCTGTGGACCCCTCAACTTCCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAAGTGCCGTTAAAGAGTaGCAGATAGTAGATCTGGAC +
Preference number: 5 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQSAVKE*QIVDLD
Trigger: GTCCAGATCTACTATCTGCAACTCTTTAACGGCACT...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CACTTCCAGGGTCTCTGCCCTTTCACTCCAATTACACCAGGTCCTGTAGGAGGCAATTTTGCACTGGATTaGTATTCTTTCCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HFQGLCPFTPITPGPVGGNFALD*YSFQAW
Trigger: CCAGGCCTGGAAAGAATACAAATCCAGTGCAAAATT...GCCTCCTACAGGACCTGGTGTAATTGGAGTGAAAGGGCAGAGACCCTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGAAGCTATTTATTCAGCTaGAGCTGCCTGGGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGSYLFS*SCLGCS
Trigger: TGAGCACCCCAGGCAGCTCAAGCTGAATAAATAGCT...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAGTGGGGACTATATTCTaGAATTCCCTTCCAGTAGAG +
Preference number: 5 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQVGTIF*NSLPVE
Trigger: CTCTACTGGAAGGGAATTCAAGAATATAGTCCCCAC...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS TCA 90 bp AGTGTTTTTGCTGGTAGTGGAGCTGGACAGGAACAGTTCCAACCTTaGGTTTTAGTCCTCTCCATCGGTAATGTTGTCAGCCGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: SVFAGSGAGQEQFQP*VLVLSIGNVVSRED
Trigger: GTCCTCACGGCTGACAACATTACCGATGGAGAGGACTAAAACTCAAGGTTGGAACTGTTCCTGTCCAGCTCCACTACCAGCAAAAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS GCA 90 bp CTTGACCTAGGCTGGTATGTCCCATTCTATGATCTCAGTCCTGGCTaGTTCCATCTGCAGATAACCAAGCTTTGCAGGAACCTGCATATG +
Preference number: 5 (lower is better)
Translates to: LDLGWYVPFYDLSPG*FHLQITKLCRNLHM
Trigger: CATATGCAGGTTCCTGCAAAGCTTGGTTATCTGCAGATGGAAGCAGCCAGGACTGAGATCATAGAATGGGACATACCAGCCTAGGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS GCA 90 bp TGGCTTATGGGCCATACTGGTGGTGGGTCACAGTTTGCTAACCCTTaGTATGGTCATGTACCAGGCAATGGCTTTCTTTACAGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: WLMGHTGGGSQFANP*YGHVPGNGFLYSSK
Trigger: TTTGCTGCTGTAAAGAAAGCCATTGCCTGGTACATGACCATAGCAAGGGTTAGCAAACTGTGACCCACCACCAGTATGGCCCATAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTCCATTTCTGACATTTaGCGCTCCAAGGCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: VTLDANHSRGHLMINSTSSISDI*RSKARL
Trigger: GAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGGA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATGCCTACTTGGACAGTTaGCTGATGACTCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: AVTVTLDANHSRGHLMINAYLDS*LMTLMR
Trigger: CCTCATCAGAGTCATCAGCAAACTGTCCAAGTAGGC...ATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AACTGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCAACACTAAATTACTGTaGGGGCTCGAGTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: NCLGIPPYPPKLHLIFVVNTKLL*GLELPL
Trigger: CAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTT...GACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAGCTCCAGTTCCGCCATaGCTCCGGCCTCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAAPVPP*LRPRQL
Trigger: CAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAGC...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTCCACGTTGACCGTGTaGATATCAGCACCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: VTLDANHSRGHLMINSTSSTLTV*ISAPLA
Trigger: GGCAAGAGGTGCTGATATCAACACGGTCAACGTGGA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GGAGATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCGTCAAGCCGTCCACGTaGACCGTGTTGATATCAGCA +
Preference number: 5 (lower is better)
Translates to: GDSSLGSSGLLKRPEENLVKPST*TVLISA
Trigger: TGCTGATATCAACACGGTCAACGTGGACGGCTTGAC...GAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CAA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGAAGGAGATTCATCTTaGGGCTCTTCTGGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: KPDMATHGLLGQAMEESYEGDSS*GSSGLL
Trigger: TAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTC...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGCAGAAGAGGCAGAGAAGGTATTTTGAGCTGGTGCTGGTATCTGCTCTGTGATACCTCACTCAGCATGTaGTGGCTGCCAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SRRGREGILSWCWYLLCDTSLSM*WLPVFL
Trigger: GAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGT...ATCACAGAGCAGATACCAGCACCAGCTCAAAATACCTTCTCTGCCTCTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CAA 90 bp TGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACGGGCCTAAAACTCTCCTTATCTTTGTaGTCCAGTAGAGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: WLLMVSLARLWRSHTGLKLSLSL*SSRAEI
Trigger: GATTTCTGCTCTACTGGACAACAAAGATAAGGAGAG...TTTTAGGCCCGTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CCAATTTCCACCTCTGCAGGCTTTAATATTCTTACCAAGCCAGCAGGAGGGAAACTGAGCCCCATGTTGTaGGCCATGTCTGCAGCTATT +
Preference number: 5 (lower is better)
Translates to: PISTSAGFNILTKPAGGKLSPML*AMSAAI
Trigger: AATAGCTGCAGACATGGCCAACAACATGGGGCTCAG...TTTCCCTCCTGCTGGCTTGGTAAGAATATTAAAGCCTGCAGAGGTGGAAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGCCCAGCCAGGTGGATaGCTTGAGCCCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFAQPGG*LEPSSF
Trigger: GAAGCTGCTGGGCTCAAGCAATCCACCTGGCTGGGC...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTTGTAATCCTATCGCTTaGGGAGGCCCAGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCCNPIA*GGPARW
Trigger: CCACCTGGCTGGGCCTCCCAAAGCGATAGGATTACA...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCTTCTATGCAATATGGTaGTGTGGACTCTGGGTTTGT +
Preference number: 5 (lower is better)
Translates to: LDVCLSIRSKGMGAVNASFYAIW*CGLWVC
Trigger: ACAAACCCAGAGTCCACACAACCATATTGCATAGAA...GCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAATCTGCAGGGAAATCATaGCCCTGGTGTGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKSAGKS*PWCASQ
Trigger: CTGGCTGGCACACCAGGGCAATGATTTCCCTGCAGA...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGACCAGGGATTTCCGCTaGGCAGGAAACACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGTRDFR*AGNTGL
Trigger: CAGCCCTGTGTTTCCTGCCAAGCGGAAATCCCTGGT...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGACAGCAGCTACCATTTTaGTCAGTTTACACCAGCACC +
Preference number: 5 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGQQLPF*SVYTST
Trigger: GGTGCTGGTGTAAACTGACAAAAATGGTAGCTGCTG...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAAGTTGAGGCTGCTCCTTaGATTTTATGTCGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQVEAAP*ILCRVK
Trigger: CTTTACACGACATAAAATCAAAGGAGCAGCCTCAAC...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCCATTTCTGACATTTaGCGCTCCAAGGCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: DANHSRGHLMINSTSCCFSISDI*RSKARL
Trigger: GAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGGA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACTGTTGGGGCTCGAGTaGCCGCTGCCGCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFALLGLE*PLPPLS
Trigger: TGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp TGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCATTCCACGTTGACCGTGTaGATATCAGCACCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: CCGCQFFSVPISMKKEIHSTLTV*ISAPLA
Trigger: GGCAAGAGGTGCTGATATCAACACGGTCAACGTGGA...ATGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp ATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCAGTCAAGCCGTCCACGTaGACCGTGTTGATATCAGCA +
Preference number: 5 (lower is better)
Translates to: MLWLPVFLSPNLHEEGDSVKPST*TVLISA
Trigger: TGCTGATATCAACACGGTCAACGTGGACGGCTTGAC...TGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAATAGGTTCCCTGGAATaGGCCACCTCACTCAGCATG +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLIGSLE*ATSLSM
Trigger: CATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCCTACAGAAATCCGAGGGCTaGAAGAGGAGCGATAGATGG +
Preference number: 5 (lower is better)
Translates to: DSSLGSSGLLKRPEENLLQKSEG*KRSDRW
Trigger: CCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCTG...TAGGAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CAA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATATCTTCCATCTTCTTaGTCACAATGTTGCAAGTGG +
Preference number: 5 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQYLPSS*SQCCKW
Trigger: CCACTTGCAACATTGTGACAAAGAAGATGGAAGATA...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AAACCAGACATGGCTACTCATGGTCTCCTTGGCCAGGCTATGGAGGAGTCATACAGTCAACACCTTATGTaGATTTCCTCTCCCAGAATG +
Preference number: 5 (lower is better)
Translates to: KPDMATHGLLGQAMEESYSQHLM*ISSPRM
Trigger: CATTCTGGGAGAGGAAATCAACATAAGGTGTTGACT...GTATGACTCCTCCATAGCCTGGCCAAGGAGACCATGAGTAGCCATGTCTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAACATTCATTAATGGTATaGTCTTTAGACACACCCACC +
Preference number: 5 (lower is better)
Translates to: AEPGVLPRAFSRWLELPQHSLMV*SLDTPT
Trigger: GGTGGGTGTGTCTAAAGACAATACCATTAATGAATG...TTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCGAGAGTGGGACAGCATaGCCCCCAAAGACCAGGGAA +
Preference number: 5 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSESGTA*PPKTRE
Trigger: TTCCCTGGTCTTTGGGGGCAATGCTGTCCCACTCTC...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCCATTCCCACTTCTGCTaGGCAATGCTCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSHSHFC*AMLSIS
Trigger: GGAGATGGAGAGCATTGCCAAGCAGAAGTGGGAATG...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCAAACCACAACAGAAGTaGCACACAGAAGTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: VTLDANHSRGHLMINSTSKPQQK*HTEVPG
Trigger: CCCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTTT...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS TCA 90 bp GCCCTGTTCTCAGCCTGCAGTTGCTCGTTCATCTGCTTCAAGGTTTaGATCTGTTTTAGCTGGTGGAGGTTCTTCATTTCTTCCTCCATT +
Preference number: 5 (lower is better)
Translates to: ALFSACSCSFICFKV*ICFSWWRFFISSSI
Trigger: AATGGAGGAAGAAATGAAGAACCTCCACCAGCTAAAACAGATTCAAACCTTGAAGCAGATGAACGAGCAACTGCAGGCTGAGAACAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290419.9
CDS TCA 90 bp TCCATCTCCAGCACTGATGATCGGTCAGAGGTCTTTTCTTGTTTCTaGACACACAATCTCTCTCTCTCTCTCTCTCTCCACAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SISSTDDRSEVFSCF*THNLSLSLSLHRSS
Trigger: TGAAGACCTGTGGAGAGAGAGAGAGAGAGAGAGATTGTGTGTTCAGAAACAAGAAAAGACCTCTGACCGATCATCAGTGCTGGAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465284.5
CDS-3UTR CAA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGGCCTACTTGGACAGTTaGCTGATGACTCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQAYLDS*LMTLMR
Trigger: CCTCATCAGAGTCATCAGCAAACTGTCCAAGTAGGC...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTGCCTACTTGGACAGTTaGCTGATGACTCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSAYLDS*LMTLMR
Trigger: CCTCATCAGAGTCATCAGCAAACTGTCCAAGTAGGC...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGTGGAGCCTAGCCTACTaGGACAGTTTGCTGATGACT +
Preference number: 5 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQWSLAY*DSLLMT
Trigger: AGTCATCAGCAAACTGTCCAAGTAGGCTAGGCTCCA...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTGGAGCCTAGCCTACTaGGACAGTTTGCTGATGACT +
Preference number: 5 (lower is better)
Translates to: LDANHSRGHLMINSTSCCWSLAY*DSLLMT
Trigger: AGTCATCAGCAAACTGTCCAAGTAGGCTAGGCTCCA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGATGGAAGAACAGGGCATaGAAAGTGCAGAGAAAATGT +
Preference number: 5 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGWKNRA*KVQRKC
Trigger: ACATTTTCTCTGCACTTTCAATGCCCTGTTCTTCCA...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATACTGAGCAGCAGGAAGTaGAGGGGTCCACAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: HSPDGSNYHNHASIKTVILSSRK*RGPQLS
Trigger: GCTCAGCTGTGGACCCCTCAACTTCCTGCTGCTCAG...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCGCAGTCACTGTCACCTaGGATGCTAACCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: DANHSRGHLMINSTSCCFAVTVT*DANHSR
Trigger: TCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGCAGTCACTGTCACCTaGGATGCTAACCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQAVTVT*DANHSR
Trigger: TCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCGCAGTCACTGTCACCTaGGATGCTAACCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSAVTVT*DANHSR
Trigger: TCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGC...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGGTCAAGCCGTCCACGTaGACCGTGTTGATATCAGCA +
Preference number: 5 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGVKPST*TVLISA
Trigger: TGCTGATATCAACACGGTCAACGTGGACGGCTTGAC...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCAACCTCACTCAGCATGTaGTGGCTGCCAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: MLWLPVFLSPNLHEEGDSTSLSM*WLPVFL
Trigger: GAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGT...TGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGGGCAGAGAAGGTATTTaGAGCTGGTGCTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQGREGI*SWCWYL
Trigger: CAGATACCAGCACCAGCTCAAAATACCTTCTCTGCC...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTATATCACTTGTGCTGTaGAGCTTCCGGGGTGCTAGT +
Preference number: 5 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSISLVL*SFRGAS
Trigger: ACTAGCACCCCGGAAGCTCAACAGCACAAGTGATAT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGTTCTTTTCACCCCTGTTGATCAAGGTCAGGGCAAAGACAAGGAGGAAGGACCACAGACCATTAACTaGAGTTTTAGCTTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: VVLFTPVDQGQGKDKEEGPQTIN*SFSFLA
Trigger: AGCAAGGAAGCTAAAACTCAAGTTAATGGTCTGTGG...TCCTTCCTCCTTGTCTTTGCCCTGACCTTGATCAACAGGGGTGAAAAGAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAGGGTTAGACCCTGCCTaGAAAATCAGTATGGTAGGC +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLGLDPA*KISMVG
Trigger: GCCTACCATACTGATTTTCAAGGCAGGGTCTAACCC...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCGCCTTTCCTGAATCCTaGCTCTTTGAATGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSAFPES*LFEWAE
Trigger: CTCAGCCCATTCAAAGAGCAAGGATTCAGGAAAGGC...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCAGCTACTTCTGGCCCTaGCATGTCCCTTATTCAGGA +
Preference number: 5 (lower is better)
Translates to: DANHSRGHLMINSTSCCFSYFWP*HVPYSG
Trigger: TCCTGAATAAGGGACATGCAAGGGCCAGAAGTAGCT...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTAGGAGGTATTCTGGATaGCTGCCTCCTCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCRRYSG*LPPLRT
Trigger: GGTTCTGAGAGGAGGCAGCAATCCAGAATACCTCCT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAGCTGAGCCTGGTGTACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCATATACTCTTGGTTACTaGAAGCTTGGAACCTTGATA +
Preference number: 5 (lower is better)
Translates to: TAEPGVLPRAFSRWLELPYTLGY*KLGTLI
Trigger: TATCAAGGTTCCAAGCTTCAAGTAACCAAGAGTATA...TGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGTACACCAGGCTCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTATTGTTCTGCTGCTGCTaGGGTTACAAACAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLLFCCC*GYKQLG
Trigger: ACCCAGCTGTTTGTAACCCAAGCAGCAGCAGAACAA...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTGTTCTGCTGCTGCTaGGGTTACAAACAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: LDANHSRGHLMINSTSCCLFCCC*GYKQLG
Trigger: ACCCAGCTGTTTGTAACCCAAGCAGCAGCAGAACAA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCCAGCAGCTACCATTTTaGTCAGTTTACACCAGCACC +
Preference number: 5 (lower is better)
Translates to: VTLDANHSRGHLMINSTSQQLPF*SVYTST
Trigger: GGTGCTGGTGTAAACTGACAAAAATGGTAGCTGCTG...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ATAGAGCGCCTCAATGCAGTCACTGTCACCTTGGATGCTAACCATTCCAGAGGGTGTGGACTCTTGTTCTaGTCTGATCTCTTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: IERLNAVTVTLDANHSRGCGLLF*SDLLSN
Trigger: ATTTGACAAGAGATCAGACAAGAACAAGAGTCCACA...CCCTCTGGAATGGTTAGCATCCAAGGTGACAGTGACTGCATTGAGGCGCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGAAACCACAACAGAAGTaGCACACAGAAGTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQKPQQK*HTEVPG
Trigger: CCCTGGGACTTCTGTGTGCAACTTCTGTTGTGGTTT...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGATCCTGCTGTTTCTCTaGGCACCCCAATCAGGATCC +
Preference number: 5 (lower is better)
Translates to: QSILQMARITTIMLQLKLILLFL*APQSGS
Trigger: GGATCCTGATTGGGGTGCCAAGAGAAACAGCAGGAT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGTCCACGTTGACCGTGTaGATATCAGCACCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLSTLTV*ISAPLA
Trigger: GGCAAGAGGTGCTGATATCAACACGGTCAACGTGGA...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGACCTCACTCAGCATGTaGTGGCTGCCAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGTSLSM*WLPVFL
Trigger: GAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGT...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AACTGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCTGCACCTTATCTTTGTaGTCCAGTAGAGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: NCLGIPPYPPKLHLIFVVCTLSL*SSRAEI
Trigger: GATTTCTGCTCTACTGGACAACAAAGATAAGGTGCA...GACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp AACTGCCTTGGAATTCCCCCATACCCTCCCAAACTGCACCTTATCTTTGTTGTCAACTGCACCTTATCTTaGTTGTCCAGTAGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: NCLGIPPYPPKLHLIFVVNCTLS*LSSRAE
Trigger: TTCTGCTCTACTGGACAACAAAGATAAGGTGCAGTT...GACAACAAAGATAAGGTGCAGTTTGGGAGGGTATGGGGGAATTCCAAGGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp TCCCTGGAATTGGCCACCTCACTCAGCATGTTGTGGCTGCCAGTTTTTCTCAGTCAAGCAAATAGCTACTaGAATAAACTATCAGTGTGC +
Preference number: 5 (lower is better)
Translates to: SLELATSLSMLWLPVFLSQANSY*NKLSVC
Trigger: GCACACTGATAGTTTATTCAAGTAGCTATTTGCTTG...ACTGAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGTGGCCAATTCCAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAGGTGGAGGGAGCAATaGTCTGTGGGATTTCATTTC +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLRWREQ*SVGFHF
Trigger: GAAATGAAATCCCACAGACAATTGCTCCCTCCACCT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGCCTTTCCCTGGTCTATaGAGTGGAAAAGGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQPFPGL*SGKGSR
Trigger: TCTTGACCCTTTTCCACTCAATAGACCAGGGAAAGG...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTGGGTTAGACCCTGCCTaGAAAATCAGTATGGTAGGC +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCGLDPA*KISMVG
Trigger: GCCTACCATACTGATTTTCAAGGCAGGGTCTAACCC...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAACTTCCTTCCCAGTACTaGCAGCTTCCACCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQLPSQY*QLPPCS
Trigger: AGAGCAGGGTGGAAGCTGCAAGTACTGGGAAGGAAG...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCCGGTGGTGGTGGTGGTaGGTATACCCAACTTCTACA +
Preference number: 5 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSRWWWW*VYPTST
Trigger: TGTAGAAGTTGGGTATACCAACCACCACCACCACCG...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTGCCTTTCCTGAATCCTaGCTCTTTGAATGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCAFPES*LFEWAE
Trigger: CTCAGCCCATTCAAAGAGCAAGGATTCAGGAAAGGC...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS TCA 90 bp GAACAAATTCATACTCAGTCTCCAGGGGAAGAGAAGCTAATGTGGTaGCCTTACCAAATGAATATATTGGTAGCCCAGCTGAGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: EQIHTQSPGEEKLMW*PYQMNILVAQLRSL
Trigger: GAGAGACCTCAGCTGGGCTACCAATATATTCATTTGGTAAGGTCACCACATTAGCTTCTCTTCCCCTGGAGACTGAGTATGAATTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCATCCATTTCTTTTGGTaGGAAGGCAAGGACTGGAAA +
Preference number: 5 (lower is better)
Translates to: VTLDANHSRGHLMINSTSIHFFW*EGKDWK
Trigger: TTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGAT...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTCACCTTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGGAAGAACAGGGCATaGAAAGTGCAGAGAAAATGT +
Preference number: 5 (lower is better)
Translates to: VTLDANHSRGHLMINSTSWKNRA*KVQRKC
Trigger: ACATTTTCTCTGCACTTTCAATGCCCTGTTCTTCCA...GGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAAGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp TGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCATGAAGGAGATTCATCTTaGGGCTCTTCTGGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: CCGCQFFSVPISMKKEIHEGDSS*GSSGLL
Trigger: TAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTC...ATGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAACCAATCTAAGAGTTTaGAGAATCTGCCCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLTNLRV*RICPQY
Trigger: GTACTGGGGGCAGATTCTCAAAACTCTTAGATTGGT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTACCAATCTAAGAGTTTaGAGAATCTGCCCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSTNLRV*RICPQY
Trigger: GTACTGGGGGCAGATTCTCAAAACTCTTAGATTGGT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCTGAGCCCCATGTTGTaGGCCATGTCTGCAGCTATT +
Preference number: 5 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFLSPML*AMSAAI
Trigger: AATAGCTGCAGACATGGCCAACAACATGGGGCTCAG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCACATAAACAATGGGGTTaGAGGGCCCCTGATGATATC +
Preference number: 5 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAHKQWG*RAPDDI
Trigger: GATATCATCAGGGGCCCTCAAACCCCATTGTTTATG...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAAGCTGCCTGCTTATaGGGTTGGAAGAACTCACAT +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLKAACL*GWKNSH
Trigger: ATGTGAGTTCTTCCAACCCAATAAGCAGGCAGCTTT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTCAGGAGGGAAAGCCATaGCAACATCATTCAATTACC +
Preference number: 5 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSQEGKP*QHHSIT
Trigger: GGTAATTGAATGATGTTGCAATGGCTTTCCCTCCTG...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTCGGTGGTGGTGGTGGTaGGTATACCCAACTTCTACA +
Preference number: 5 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFRWWWW*VYPTST
Trigger: TGTAGAAGTTGGGTATACCAACCACCACCACCACCG...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTTTCTTTGCCTCTGTTTaGTGCCCCAGGACAGGACTG +
Preference number: 5 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFFFASV*CPRTGL
Trigger: CAGTCCTGTCCTGGGGCACAAAACAGAGGCAAAGAA...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTAACATCTATCCTGTCTaGCTGCTTCAGTCCCTAAGG +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCNIYPV*LLQSLR
Trigger: CCTTAGGGACTGAAGCAGCAAGACAGGATAGATGTT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS TCA 90 bp TACAGTGGTGAAAAGTTTGCACTCTGGAACCTGACATATTTGGTTTaGATTTTGGTTCTACCACTTACTCTCGGAGTGACCTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: YSGEKFALWNLTYLV*ILVLPLTLGVTLGK
Trigger: CTTGCCCAAGGTCACTCCGAGAGTAAGTGGTAGAACCAAAATTCAAACCAAATATGTCAGGTTCCAGAGTGCAAACTTTTCACCACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACATCCATTTCTTTaGGTTGGAAGGCAAGGACTG +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLKHPFL*VGRQGL
Trigger: CAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTTT...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTAAACATCCATTTCTTTaGGTTGGAAGGCAAGGACTG +
Preference number: 5 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSKHPFL*VGRQGL
Trigger: CAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTTT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GATTCATCTTTGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACCTCCTATGCACCTTATCTTTGTaGTCCAGTAGAGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: DSSLGSSGLLKRPEENLLCTLSL*SSRAEI
Trigger: GATTTCTGCTCTACTGGACAACAAAGATAAGGTGCA...TAGGAGGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476364.5
CDS-3UTR CAA 90 bp ATGTTGTGGCTGCCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCAAACTGCACCTTATCTTaGTTGTCCAGTAGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: MLWLPVFLSPNLHEEGDSNCTLS*LSSRAE
Trigger: TTCTGCTCTACTGGACAACAAAGATAAGGTGCAGTT...TGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGGCAGCCACAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356764.6
ENST00000476364.5
CDS-3UTR CAA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCAGTGGCCTCAGATACTaGACTTTCGCCATATGTGTC +
Preference number: 5 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSSGLRY*TFAICV
Trigger: GACACATATGGCGAAAGTCAAGTATCTGAGGCCACT...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGAAACACATCCTGCAGTaGGAAGACAGGGAGGTTCTA +
Preference number: 5 (lower is better)
Translates to: QSILQMARITTIMLQLKLKHILQ*EDREVL
Trigger: TAGAACCTCCCTGTCTTCCAACTGCAGGATGTGTTT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GAAGTCTTACATGTTTGGACCAAATCCAATGTGGACAAAGTAGCTGAGCAGCAGTGCCTGCTTATTGGGTaGGAAGAACTCACATCTTAT +
Preference number: 5 (lower is better)
Translates to: EVLHVWTKSNVDKVAEQQCLLIG*EELTSY
Trigger: ATAAGATGTGAGTTCTTCCAACCCAATAAGCAGGCA...CTGCTGCTCAGCTACTTTGTCCACATTGGATTTGGTCCAAACATGTAAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAAGGAGGTATTCTGGATaGCTGCCTCCTCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIRRYSG*LPPLRT
Trigger: GGTTCTGAGAGGAGGCAGCAATCCAGAATACCTCCT...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGATGGCCTCAACACCTTaGTCACTTAAACCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: QSILQMARITTIMLQLKLMASTP*SLKPGV
Trigger: GACACCAGGTTTAAGTGACAAAGGTGTTGAGGCCAT...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATACATTCCCACTTCTGCTaGGCAATGCTCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIHSHFC*AMLSIS
Trigger: GGAGATGGAGAGCATTGCCAAGCAGAAGTGGGAATG...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTGCCCATCTAAGGACTaGATTTGCTGCTTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: DANHSRGHLMINSTSCCFCPSKD*ICCFLK
Trigger: TTTCAGAAAGCAGCAAATCAAGTCCTTAGATGGGCA...GAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GAACCAATGGTAATGGGTGAGGTAGCAGGAGATGAATTGCGATTGGCTGAAATGATCTTTTCAAGTAAGTaGATACATAGGTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: EPMVMGEVAGDELRLAEMIFSSK*IHRWRE
Trigger: CTCCCTCCACCTATGTATCAACTTACTTGAAAAGAT...CATTTCAGCCAATCGCAATTCATCTCCTGCTACCTCACCCATTACCATTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS TCA 90 bp TTTGAATCTGTTTTAGCTGGTGGAGGTTCTGTAGAGATTGAGACATaGAAAGGACAGACAGAAAAGACAGAGAGAGACAAGACAGACCAG +
Preference number: 5 (lower is better)
Translates to: FESVLAGGGSVEIET*KGQTEKTERDKTDQ
Trigger: CTGGTCTGTCTTGTCTCTCTCTGTCTTTTCTGTCTGTCCTTTTCATGTCTCAATCTCTACAGAACCTCCACCAGCTAAAACAGATTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS GCA 90 bp CAGCCCTATGATAATTCGGGTGATTCAGTTCTAGTGGATATTAGTTaGCAGCTACTAACCCTGAAGGCAAAAGCAAATAGGCTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: QPYDNSGDSVLVDIS*QLLTLKAKANRLKE
Trigger: TTCTTTCAGCCTATTTGCTTTTGCCTTCAGGGTTAGTAGCTGGCAACTAATATCCACTAGAACTGAATCACCCGAATTATCATAGGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp TCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAATGGAAGAACAGGGCATaGAAAGTGCAGAGAAAATGT +
Preference number: 5 (lower is better)
Translates to: SPEHSPDGSNYHNHASIKWKNRA*KVQRKC
Trigger: ACATTTTCTCTGCACTTTCAATGCCCTGTTCTTCCA...TTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATCCACGTTGACCGTGTaGATATCAGCACCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFASTLTV*ISAPLA
Trigger: GGCAAGAGGTGCTGATATCAACACGGTCAACGTGGA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAGTCAAGCCGTCCACGTaGACCGTGTTGATATCAGCA +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAVKPST*TVLISA
Trigger: TGCTGATATCAACACGGTCAACGTGGACGGCTTGAC...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAATAGGTTCCCTGGAATaGGCCACCTCACTCAGCATG +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAIGSLE*ATSLSM
Trigger: CATGCTGAGTGAGGTGGCCAATTCCAGGGAACCTAT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACAGAAATCCGAGGGCTaGAAGAGGAGCGATAGATGG +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAQKSEG*KRSDRW
Trigger: CCATCTATCGCTCCTCTTCAAGCCCTCGGATTTCTG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTCTCTCCTTATCTTTGTaGTCCAGTAGAGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCLSLSL*SSRAEI
Trigger: GATTTCTGCTCTACTGGACAACAAAGATAAGGAGAG...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTAGGTGGAGGGAGCAATaGTCTGTGGGATTTCATTTC +
Preference number: 5 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFRWREQ*SVGFHF
Trigger: GAAATGAAATCCCACAGACAATTGCTCCCTCCACCT...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCAGTATCTTCCATCTTCTTaGTCACAATGTTGCAAGTGG +
Preference number: 5 (lower is better)
Translates to: TVIKLGIGVWKNRALKVQYLPSS*SQCCKW
Trigger: CCACTTGCAACATTGTGACAAAGAAGATGGAAGATA...CTGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTTCTCTAGAGTTGCCCAACTTTaGAGTAATAAATGCATAGCC +
Preference number: 5 (lower is better)
Translates to: ANHSRGHLMINSTSCCFSRVAQL*SNKCIA
Trigger: GGCTATGCATTTATTACTCAAAAGTTGGGCAACTCT...AGAGAAACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGTCTAAAAATGGGGTTTaGTCAGAGGAAACATATCTC +
Preference number: 5 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKSKNGV*SEETYL
Trigger: GAGATATGTTTCCTCTGACAAAACCCCATTTTTAGA...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTAGTCAACACCTTATGTaGATTTCCTCTCCCAGAATG +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCSQHLM*ISSPRM
Trigger: CATTCTGGGAGAGGAAATCAACATAAGGTGTTGACT...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTCCCCAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTACTTCTTCCATCATCTTaGGCTCAATTAAATGCCTCT +
Preference number: 5 (lower is better)
Translates to: TPQSILQMARITTIMLQLLLPSS*AQLNAS
Trigger: AGAGGCATTTAATTGAGCCAAAGATGATGGAAGAAG...TAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AGTAGTTTACACACACTTTCGTGGGATCCACAGACCATTAACTTGAGTTTTAGCCGATTAGTCTGCTATTaGGGTGTGAAGAGCCAATGT +
Preference number: 5 (lower is better)
Translates to: SSLHTLSWDPQTINLSFSRLVCY*GVKSQC
Trigger: ACATTGGCTCTTCACACCCAAATAGCAGACTAATCG...GCTAAAACTCAAGTTAATGGTCTGTGGATCCCACGAAAGTGTGTGTAAACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGCGATTAGTCTGCTATTaGGGTGTGAAGAGCCAATGT +
Preference number: 5 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLRLVCY*GVKSQC
Trigger: ACATTGGCTCTTCACACCCAAATAGCAGACTAATCG...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AACTGTCATAAAACTTGGGATAGGGGTTTGGAAGAACAGGGCATTGAAAGTGCATTTGTAAACACTGCTTaGGTAGTCTCCTCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: NCHKTWDRGLEEQGIESAFVNTA*VVSSSD
Trigger: GTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAA...TGCACTTTCAATGCCCTGTTCTTCCAAACCCCTATCCCAAGTTTTATGACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GTGGCTACCACAAGACTCACCTATATCAGAGGACACTGGGTTAATGTAAAAAGCCATTTAGGAAATTCCTaGATACTACCAGAGACCCTT +
Preference number: 5 (lower is better)
Translates to: VATTRLTYIRGHWVNVKSHLGNS*ILPETL
Trigger: AAGGGTCTCTGGTAGTATCAAGGAATTTCCTAAATG...GCTTTTTACATTAACCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTATCTTACGGTTCTTTaGAACGCCAATCTAGGCTTC +
Preference number: 5 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGYLTVL*NANLGF
Trigger: GAAGCCTAGATTGGCGTTCAAAAGAACCGTAAGATA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTTATCTTACGGTTCTTTaGAACGCCAATCTAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TMNQTVLSRKTISLLFGCYLTVL*NANLGF
Trigger: GAAGCCTAGATTGGCGTTCAAAAGAACCGTAAGATA...ACACCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CTCTGGGTTTGTAAACACTGCTTTGGTAGTCTCCTCTTCAGACCTGCTTTGAAGCATGGCTCCTTCATTTaGAGTTTAGATTTAACCTTC +
Preference number: 5 (lower is better)
Translates to: LWVCKHCFGSLLFRPALKHGSFI*SLDLTF
Trigger: GAAGGTTAAATCTAAACTCAAAATGAAGGAGCCATG...CTTCAAAGCAGGTCTGAAGAGGAGACTACCAAAGCAGTGTTTACAAACCCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAACAGTCTAGGAACCCTTaGCATCGGTCATGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQQSRNP*HRSCFF
Trigger: AAAGAAGCATGACCGATGCAAAGGGTTCCTAGACTG...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS GCA 90 bp CAGTGTAGTTGCTCAATAGATCCTTCTTGCATTGTTTGGGCCACATaGTTAACAAATGGTGAAAACTGTGCCAAATATGCAGACAGCTTA +
Preference number: 5 (lower is better)
Translates to: QCSCSIDPSCIVWAT*LTNGENCAKYADSL
Trigger: TAAGCTGTCTGCATATTTGGCACAGTTTTCACCATTTGTTAAGCATGTGGCCCAAACAATGCAAGAAGGATCTATTGAGCAACTACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS-3UTR CAA 90 bp CTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTGATCCATTTCTTTTGGTaGGAAGGCAAGGACTGGAAA +
Preference number: 5 (lower is better)
Translates to: LKRVIERSVLPPKHPFLLIHFFW*EGKDWK
Trigger: TTTCCAGTCCTTGCCTTCCAACCAAAAGAAATGGAT...CAAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAAACACTAAATTACTGTaGGGGCTCGAGTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFANTKLL*GLELPL
Trigger: CAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAACCTCACTCAGCATGTaGTGGCTGCCAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFATSLSM*WLPVFL
Trigger: GAGAAAAACTGGCAGCCACAACATGCTGAGTGAGGT...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAGGCAGAGAAGGTATTTaGAGCTGGTGCTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAGREGI*SWCWYL
Trigger: CAGATACCAGCACCAGCTCAAAATACCTTCTCTGCC...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp TTGGATGCTAACCATTCCAGAGGGCATCTGATGATCAATTCAACATCCTGCTGTTCTAAAAATGGGGTTTaGTCAGAGGAAACATATCTC +
Preference number: 5 (lower is better)
Translates to: LDANHSRGHLMINSTSCCSKNGV*SEETYL
Trigger: GAGATATGTTTCCTCTGACAAAACCCCATTTTTAGA...ACAGCAGGATGTTGAATTGATCATCAGATGCCCTCTGGAATGGTTAGCATCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGCCACAGACCATTAACTaGAGTTTTAGCTTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: QSILQMARITTIMLQLKLPQTIN*SFSFLA
Trigger: AGCAAGGAAGCTAAAACTCAAGTTAATGGTCTGTGG...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AAGACAATGAACCAGACGGTGCTAAGCAGAAAAACGATTAGTCTGCTATTTGGGTGTGGACTCTTGTTCTaGTCTGATCTCTTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: KTMNQTVLSRKTISLLFGCGLLF*SDLLSN
Trigger: ATTTGACAAGAGATCAGACAAGAACAAGAGTCCACA...CCCAAATAGCAGACTAATCGTTTTTCTGCTTAGCACCGTCTGGTTCATTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCCTTTTCAAGTAAGTaGATACATAGGTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: QSILQMARITTIMLQLKLSFSSK*IHRWRE
Trigger: CTCCCTCCACCTATGTATCAACTTACTTGAAAAGGA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608999.6
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCATTGGGCTCTTCTGGCTaGTTAAAAAGGCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFALGSSG*LKRPEE
Trigger: CTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAA...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAGAAGGAGATTCATCTTaGGGCTCTTCTGGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIEGDSS*GSSGLL
Trigger: TAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTC...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTTTCTATGCAATATGGTaGTGTGGACTCTGGGTTTGT +
Preference number: 5 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFFYAIW*CGLWVC
Trigger: ACAAACCCAGAGTCCACACAACCATATTGCATAGAA...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAAAACATCCATTTCTTTaGGTTGGAAGGCAAGGACTG +
Preference number: 5 (lower is better)
Translates to: HSPDGSNYHNHASIKTVIKHPFL*VGRQGL
Trigger: CAGTCCTTGCCTTCCAACCAAAAGAAATGGATGTTT...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290419.9
ENST00000391959.5
ENST00000491336.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCAGAAGGAGATTCATCTTaGGGCTCTTCTGGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAEGDSS*GSSGLL
Trigger: TAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTC...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS-3UTR CAA 90 bp ACTGAAGAGGGTGATAGAAAGAAGTGTCCTTCCACCAAAACATCCATTTCTTTTACAAAGTACATGGCTTaGAGAGTTTCTTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: TEEGDRKKCPSTKTSISFTKYMA*RVSSSI
Trigger: GATGGAAGAAGAAACTCTCAAAGCCATGTACTTTGT...AAAAGAAATGGATGTTTTGGTGGAAGGACACTTCTTTCTATCACCCTCTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp GAAAAACAAACTTTAGCCCCAGAATCTCTGGAATGGCCAAATCATTACTTCCAACATTCATTAATGGTATaGTCTTTAGACACACCCACC +
Preference number: 5 (lower is better)
Translates to: EKQTLAPESLEWPNHYFQHSLMV*SLDTPT
Trigger: GGTGGGTGTGTCTAAAGACAATACCATTAATGAATG...TTGGAAGTAATGATTTGGCCATTCCAGAGATTCTGGGGCTAAAGTTTGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CAGAGCATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTATACTCTTGGTTACTaGAAGCTTGGAACCTTGATA +
Preference number: 5 (lower is better)
Translates to: QSILQMARITTIMLQLKLYTLGY*KLGTLI
Trigger: TATCAAGGTTCCAAGCTTCAAGTAACCAAGAGTATA...CAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATGCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp CATTCTCCAGATGGCTCGAATTACCACAATCATGCTTCAATTAAAACTGTCATAACAAAGTACATGGCTTaGAGAGTTTCTTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: HSPDGSNYHNHASIKTVITKYMA*RVSSSI
Trigger: GATGGAAGAAGAAACTCTCAAAGCCATGTACTTTGT...TATGACAGTTTTAATTGAAGCATGATTGTGGTAATTCGAGCCATCTGGAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391959.5
ENST00000608999.6
CDS-3UTR CAA 90 bp AATAGCTACTTGAATAAACTATCAGTGTGCCTCTCTCTCTTTAAAGACTTTGCACAAGCAAATAGCTACTaGAATAAACTATCAGTGTGC +
Preference number: 5 (lower is better)
Translates to: NSYLNKLSVCLSLFKDFAQANSY*NKLSVC
Trigger: GCACACTGATAGTTTATTCAAGTAGCTATTTGCTTG...TGCAAAGTCTTTAAAGAGAGAGAGGCACACTGATAGTTTATTCAAGTAGCTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356764.6
ENST00000476364.5
ENST00000480184.5
CDS CCA 72 bp CGGCCAGAAAGACAGCACCGTCCTCGAAGCGGACCCTaGGGCTCCCGCGCCTGGTCAGCGGCTGCCGCCCCG +
Preference number: 6 (lower is better)
Translates to: RPERQHRPRSGP*GSRAWSAAAAP
Trigger: CGGGGCGGCAGCCGCTGACCAGGCGCGGGAGCCCCAGGGTCCGCTTCGAGGACGGTGCTGTCTTTCTGGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS GCA 72 bp CTCTGTCAGCGAGCCCCGCCAGCGCCGAAGCTGCTCTaGCCGCCGCATTCGCGCCGACTCTGCCCGCTTCCC +
Preference number: 6 (lower is better)
Translates to: LCQRAPPAPKLL*PPHSRRLCPLP
Trigger: GGGAAGCGGGCAGAGTCGGCGCGAATGCGGCGGGCAGAGCAGCTTCGGCGCTGGCGGGGCTCGCTGACAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS CCA 72 bp CCTGGGTGTCCGAGGACTCGATGGACTCCGAGAGTCTaGCCACCACTCGGGTCAGGGCCCTGTTCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: PGCPRTRWTPRV*PPLGSGPCSQP
Trigger: AGGCTGAGAACAGGGCCCTGACCCGAGTGGTGGCCAGACTCTCGGAGTCCATCGAGTCCTCGGACACCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290419.9
ENST00000618451.1
CDS CAA 72 bp CTGCCCGCTTCCCTCCTAGGTGCTCCAGTTCCGCCATaGCTCCGGCCTCGGCAGCTGCTGCCAAAACTACCA +
Preference number: 6 (lower is better)
Translates to: LPASLLGAPVPP*LRPRQLLPKLP
Trigger: TGGTAGTTTTGGCAGCAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAGCACCTAGGAGGGAAGCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS CCA 72 bp GCAAGAACTAGAGCTCCTGGGTGTCCGAGGACTCGATaGACTCCGAGAGTCTGGCCACCACTCGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: ARTRAPGCPRTR*TPRVWPPLGSG
Trigger: CCCTGACCCGAGTGGTGGCCAGACTCTCGGAGTCCATCGAGTCCTCGGACACCCAGGAGCTCTAGTTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290419.9
ENST00000618451.1
CDS CAA 90 bp GCGCCGACTCTGCCCGCTTCCCTCCTAGGTGCTCCAGTTCCGCCATaGCTCCGGCCTCGGCAGCTGCTGCCAAAACTACCAACACTAAAT +
Preference number: 6 (lower is better)
Translates to: APTLPASLLGAPVPP*LRPRQLLPKLPTLN
Trigger: ATTTAGTGTTGGTAGTTTTGGCAGCAGCTGCCGAGGCCGGAGCAATGGCGGAACTGGAGCACCTAGGAGGGAAGCGGGCAGAGTCGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS CAA 90 bp CCGGCCTCGGCAGCTGCTGCCAAAACTACCAACACTAAATTACTGTaGGGGCTCGAGTTGCCGCTGCCGCCTCTCTCAGAGCGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: PASAAAAKTTNTKLL*GLELPLPPLSERFS
Trigger: GCTGAAGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGGTAGTTTTGGCAGCAGCTGCCGAGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS GCA 72 bp CCAACACTAAATTACTGTTGGGGCTCGAGTTGCCGCTaGCGCCTCTCTCAGAGCGCTTCAGCCCGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: PTLNYCWGSSCR*RLSQSASARSR
Trigger: TCTGCTCCGGGCTGAAGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS CAA 90 bp GCTGCTGCCAAAACTACCAACACTAAATTACTGTTGGGGCTCGAGTaGCCGCTGCCGCCTCTCTCAGAGCGCTTCAGCCCGGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: AAAKTTNTKLLLGLE*PLPPLSERFSPEQR
Trigger: CCTCTGCTCCGGGCTGAAGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGGTAGTTTTGGCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS GCA 72 bp AAACTACCAACACTAAATTACTGTTGGGGCTCGAGTTaGCGCTGCCGCCTCTCTCAGAGCGCTTCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: KLPTLNYCWGSS*RCRLSQSASAR
Trigger: CCGGGCTGAAGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGGTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS CCA 72 bp CAGCTGCTGCCAAAACTACCAACACTAAATTACTGTTaGGGCTCGAGTTGCCGCTGCCGCCTCTCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: QLLPKLPTLNYC*GSSCRCRLSQS
Trigger: GCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGGTAGTTTTGGCAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS CCA 72 bp GCTGAGGTCTCTCTCACTGCCTCCCTTGACCTAGGCTaGTATGTCCCATTCTATGATCTCAGTCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: AEVSLTASLDLG*YVPFYDLSPGC
Trigger: GCAGCCAGGACTGAGATCATAGAATGGGACATACCAGCCTAGGTCAAGGGAGGCAGTGAGAGAGACCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 72 bp AAAACTACCAACACTAAATTACTGTTGGGGCTCGAGTaGCCGCTGCCGCCTCTCTCAGAGCGCTTCAGCCCG +
Preference number: 6 (lower is better)
Translates to: KTTNTKLLLGLE*PLPPLSERFSP
Trigger: CGGGCTGAAGCGCTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGGTAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS CAA 72 bp GCAGCTGCTGCCAAAACTACCAACACTAAATTACTGTaGGGGCTCGAGTTGCCGCTGCCGCCTCTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: AAAAKTTNTKLL*GLELPLPPLSE
Trigger: CTCTGAGAGAGGCGGCAGCGGCAACTCGAGCCCCAACAGTAATTTAGTGTTGGTAGTTTTGGCAGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356764.6
ENST00000391959.5
ENST00000476364.5
ENST00000480184.5
ENST00000608999.6
CDS CAA 90 bp CAAGGCCCAACCCCAGTTGCTCCAGGGGAGTGGGTTGGACTTGGGTaGCTATTGGCTAAGAAAGATCAATTTCCATCTGGCAATGACCCC +
Preference number: 6 (lower is better)
Translates to: QGPTPVAPGEWVGLG*LLAKKDQFPSGNDP
Trigger: GGGGTCATTGCCAGATGGAAATTGATCTTTCTTAGCCAATAGCAACCCAAGTCCAACCCACTCCCCTGGAGCAACTGGGGTTGGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 72 bp CACCACTCGGGTCAGGGCCCTGTTCTCAGCCTGCAGTaGCTCGTTCATCTGCTTCAAGGTTTGAATCTGTTT +
Preference number: 6 (lower is better)
Translates to: HHSGQGPVLSLQ*LVHLLQGLNLF
Trigger: AAACAGATTCAAACCTTGAAGCAGATGAACGAGCAACTGCAGGCTGAGAACAGGGCCCTGACCCGAGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290419.9
ENST00000618451.1
CDS CAA 90 bp CCTTGGTTACCCAAGGCCCAACCCCAGTTGCTCCAGGGGAGTGGGTaGGACTTGGGTTGCTATTGGCTAAGAAAGATCAATTTCCATCTG +
Preference number: 6 (lower is better)
Translates to: PWLPKAQPQLLQGSG*DLGCYWLRKINFHL
Trigger: CAGATGGAAATTGATCTTTCTTAGCCAATAGCAACCCAAGTCCAACCCACTCCCCTGGAGCAACTGGGGTTGGGCCTTGGGTAACCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 90 bp TTACCCAAGGCCCAACCCCAGTTGCTCCAGGGGAGTGGGTTGGACTaGGGTTGCTATTGGCTAAGAAAGATCAATTTCCATCTGGCAATG +
Preference number: 6 (lower is better)
Translates to: LPKAQPQLLQGSGLD*GCYWLRKINFHLAM
Trigger: CATTGCCAGATGGAAATTGATCTTTCTTAGCCAATAGCAACCCAAGTCCAACCCACTCCCCTGGAGCAACTGGGGTTGGGCCTTGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS TCA 72 bp TGCAAAGCTGGCCTCATTAGAGAGGGCCTGGCTCCATaGGGGTCTCATTTATATAGGCTGTGTTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: CKAGLIREGLAP*GSHLYRLCSAS
Trigger: TGAGGCAGAACACAGCCTATATAAATGAGACCCTCATGGAGCCAGGCCCTCTCTAATGAGGCCAGCTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS GCA 72 bp CCCCAGTTGCTCCAGGGGAGTGGGTTGGACTTGGGTTaGTATTGGCTAAGAAAGATCAATTTCCATCTGGCA +
Preference number: 6 (lower is better)
Translates to: PQLLQGSGLDLG*YWLRKINFHLA
Trigger: TGCCAGATGGAAATTGATCTTTCTTAGCCAATAGCAACCCAAGTCCAACCCACTCCCCTGGAGCAACTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 72 bp ACCCCAGTTGCTCCAGGGGAGTGGGTTGGACTTGGGTaGCTATTGGCTAAGAAAGATCAATTTCCATCTGGC +
Preference number: 6 (lower is better)
Translates to: TPVAPGEWVGLG*LLAKKDQFPSG
Trigger: GCCAGATGGAAATTGATCTTTCTTAGCCAATAGCAACCCAAGTCCAACCCACTCCCCTGGAGCAACTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS TCA 72 bp GCTGGTAGTGGAGCTGGACAGGAACAGTTCCAACCTTaGGTTTTAGTCCTCTCCATCGGTAATGTTGTCAGC +
Preference number: 6 (lower is better)
Translates to: AGSGAGQEQFQP*VLVLSIGNVVS
Trigger: GCTGACAACATTACCGATGGAGAGGACTAAAACTCAAGGTTGGAACTGTTCCTGTCCAGCTCCACTACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 72 bp TATGGCTTATGGGCCATACTGGTGGTGGGTCACAGTTaGCTAACCCTTGCTATGGTCATGTACCAGGCAATG +
Preference number: 6 (lower is better)
Translates to: YGLWAILVVGHS*LTLAMVMYQAM
Trigger: CATTGCCTGGTACATGACCATAGCAAGGGTTAGCAAACTGTGACCCACCACCAGTATGGCCCATAAGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 72 bp GTTGCTCCAGGGGAGTGGGTTGGACTTGGGTTGCTATaGGCTAAGAAAGATCAATTTCCATCTGGCAATGAC +
Preference number: 6 (lower is better)
Translates to: VAPGEWVGLGLL*AKKDQFPSGND
Trigger: GTCATTGCCAGATGGAAATTGATCTTTCTTAGCCAATAGCAACCCAAGTCCAACCCACTCCCCTGGAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 90 bp GACTATTTGTATGGCTTATGGGCCATACTGGTGGTGGGTCACAGTTaGCTAACCCTTGCTATGGTCATGTACCAGGCAATGGCTTTCTTT +
Preference number: 6 (lower is better)
Translates to: DYLYGLWAILVVGHS*LTLAMVMYQAMAFF
Trigger: AAAGAAAGCCATTGCCTGGTACATGACCATAGCAAGGGTTAGCAAACTGTGACCCACCACCAGTATGGCCCATAAGCCATACAAATAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS TCA 72 bp GGCCTGGGATTTGTGAGGAGTCCTTTTCAAGTAAGTTaGTACATAGGTGGAGGGAGCAATTGTCTGTGGGAT +
Preference number: 6 (lower is better)
Translates to: GLGFVRSPFQVS*YIGGGSNCLWD
Trigger: ATCCCACAGACAATTGCTCCCTCCACCTATGTATCAACTTACTTGAAAAGGACTCCTCACAAATCCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608999.6
CDS CCA 72 bp CTGATGCCTGGGTCTCAACCCAGACCACTGATTATTTaGGGATGGACCCAGACATCCCTATATGTATATGTT +
Preference number: 6 (lower is better)
Translates to: LMPGSQPRPLII*GWTQTSLYVYV
Trigger: AACATATACATATAGGGATGTCTGGGTCCATCCCCAAATAATCAGTGGTCTGGGTTGAGACCCAGGCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CCA 72 bp ATATCCTTTGCAAAGCTGGCCTCATTAGAGAGGGCCTaGCTCCATGAGGGTCTCATTTATATAGGCTGTGTT +
Preference number: 6 (lower is better)
Translates to: ISFAKLASLERA*LHEGLIYIGCV
Trigger: AACACAGCCTATATAAATGAGACCCTCATGGAGCCAGGCCCTCTCTAATGAGGCCAGCTTTGCAAAGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 72 bp ACCCATAGGTATACGTTAAAAGCTCCTAGATGTTTCTaGCAGCCAAGATTGAGAGCCCCTGCCCTTGGTTAC +
Preference number: 6 (lower is better)
Translates to: THRYTLKAPRCF*QPRLRAPALGY
Trigger: GTAACCAAGGGCAGGGGCTCTCAATCTTGGCTGCAAGAAACATCTAGGAGCTTTTAACGTATACCTATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 90 bp CCAGTTTTTCTCAGTCCCAATCTCCATGAAGAAGGAGATTCATCTTaGGGCTCTTCTGGCTTGTTAAAAAGGCCAGAAGAGAACTGCCTC +
Preference number: 6 (lower is better)
Translates to: PVFLSPNLHEEGDSS*GSSGLLKRPEENCL
Trigger: GAGGCAGTTCTCTTCTGGCCTTTTTAACAAGCCAGAAGAGCCCAAAGATGAATCTCCTTCTTCATGGAGATTGGGACTGAGAAAAACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356764.6
CDS GCA 72 bp CTGGGGGCACAGTGTAGTTGCTCAATAGATCCTTCTTaGATTGTTTGGGCCACATGCTTAACAAATGGTGAA +
Preference number: 6 (lower is better)
Translates to: LGAQCSCSIDPS*IVWATCLTNGE
Trigger: TTCACCATTTGTTAAGCATGTGGCCCAAACAATGCAAGAAGGATCTATTGAGCAACTACACTGTGCCCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CCA 72 bp CCTGGGTCTCAACCCAGACCACTGATTATTTGGGGATaGACCCAGACATCCCTATATGTATATGTTAAAAGC +
Preference number: 6 (lower is better)
Translates to: PGSQPRPLIIWG*TQTSLYVYVKS
Trigger: GCTTTTAACATATACATATAGGGATGTCTGGGTCCATCCCCAAATAATCAGTGGTCTGGGTTGAGACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 90 bp CCACTAGAATGTAAATTCCGTAAGAGCAGGGCTGTTTGTTCATTGTaGCATCCCCAGAATCTAGAAAAGTGCTTGATCATAATCGGCGCT +
Preference number: 6 (lower is better)
Translates to: PLECKFRKSRAVCSL*HPQNLEKCLIIIGA
Trigger: AGCGCCGATTATGATCAAGCACTTTTCTAGATTCTGGGGATGCAACAATGAACAAACAGCCCTGCTCTTACGGAATTTACATTCTAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498070.5
CDS TCA 72 bp GTTTTAGCTGGTGGAGGTTCTGTAGAGATTGAGACATaGAAAGGACAGACAGAAAAGACAGAGAGAGACAAG +
Preference number: 6 (lower is better)
Translates to: VLAGGGSVEIET*KGQTEKTERDK
Trigger: CTTGTCTCTCTCTGTCTTTTCTGTCTGTCCTTTTCATGTCTCAATCTCTACAGAACCTCCACCAGCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CCA 72 bp GAGATGAATTGCGATTGGCTGAAATGTAGGGACTTGTaGGGTCACTACTTCTACCAAATGAAGCACTTTTCA +
Preference number: 6 (lower is better)
Translates to: EMNCDWLKCRDL*GHYFYQMKHFS
Trigger: TGAAAAGTGCTTCATTTGGTAGAAGTAGTGACCCCACAAGTCCCTACATTTCAGCCAATCGCAATTCATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391959.5
CDS CCA 72 bp CAGTGTAGTTGCTCAATAGATCCTTCTTGCATTGTTTaGGCCACATGCTTAACAAATGGTGAAAACTGTGCC +
Preference number: 6 (lower is better)
Translates to: QCSCSIDPSCIV*ATCLTNGENCA
Trigger: GGCACAGTTTTCACCATTTGTTAAGCATGTGGCCCAAACAATGCAAGAAGGATCTATTGAGCAACTACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS TCA 72 bp GAAAAGTTTGCACTCTGGAACCTGACATATTTGGTTTaGATTTTGGTTCTACCACTTACTCTCGGAGTGACC +
Preference number: 6 (lower is better)
Translates to: EKFALWNLTYLV*ILVLPLTLGVT
Trigger: GGTCACTCCGAGAGTAAGTGGTAGAACCAAAATTCAAACCAAATATGTCAGGTTCCAGAGTGCAAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS GCA 72 bp GATAATTCGGGTGATTCAGTTCTAGTGGATATTAGTTaGCAGCTACTAACCCTGAAGGCAAAAGCAAATAGG +
Preference number: 6 (lower is better)
Translates to: DNSGDSVLVDIS*QLLTLKAKANR
Trigger: CCTATTTGCTTTTGCCTTCAGGGTTAGTAGCTGGCAACTAATATCCACTAGAACTGAATCACCCGAATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CCA 72 bp TGTGAGGAGTCCTTTTCAAGTAAGTTGATACATAGGTaGAGGGAGCAATTGTCTGTGGGATTTCATTTCCTT +
Preference number: 6 (lower is better)
Translates to: CEESFSSKLIHR*REQLSVGFHFL
Trigger: AAGGAAATGAAATCCCACAGACAATTGCTCCCTCCACCTATGTATCAACTTACTTGAAAAGGACTCCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608999.6
CDS TCA 72 bp ACTTATAATGTCAACCTCCTTCCATGTTGGCACTTCTaGTTCCTCCTTAGCCTACTCTATATGGTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: TYNVNLLPCWHF*FLLSLLYMVFP
Trigger: TGGAAAAACCATATAGAGTAGGCTAAGGAGGAATCAGAAGTGCCAACATGGAAGGAGGTTGACATTATAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498070.5
CDS TCA 72 bp CTGTGCCAAATATGCAGACAGCTTATATTACAGTGGTaGAAAGTTTGCACTCTGGAACCTGACATATTTGGT +
Preference number: 6 (lower is better)
Translates to: LCQICRQLILQW*KVCTLEPDIFG
Trigger: ACCAAATATGTCAGGTTCCAGAGTGCAAACTTTTCACCACTGTAATATAAGCTGTCTGCATATTTGGCACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 72 bp TACTTCTACCAAATGAAGCACTTCTCTGCACCAAACTaGCGAGTTTCACATCTTGATGGATCTTTTCAAGTA +
Preference number: 6 (lower is better)
Translates to: YFYQMKHFSAPN*RVSHLDGSFQV
Trigger: TACTTGAAAAGATCCATCAAGATGTGAAACTCGCAAGTTTGGTGCAGAGAAGTGCTTCATTTGGTAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434615.2
CDS CAA 72 bp AGAAAGAACAGGCTCTGGTCAGGACTAATTAGATTGTaGCTGACAATTAAAAATTCATCTCAGAGGAGTGGT +
Preference number: 6 (lower is better)
Translates to: RKNRLWSGLIRL*LTIKNSSQRSG
Trigger: ACCACTCCTCTGAGATGAATTTTTAATTGTCAGCAACAATCTAATTAGTCCTGACCAGAGCCTGTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618451.1
CDS CAA 72 bp GAAAGAAAGAACAGGCTCTGGTCAGGACTAATTAGATaGTTGCTGACAATTAAAAATTCATCTCAGAGGAGT +
Preference number: 6 (lower is better)
Translates to: ERKNRLWSGLIR*LLTIKNSSQRS
Trigger: ACTCCTCTGAGATGAATTTTTAATTGTCAGCAACAATCTAATTAGTCCTGACCAGAGCCTGTTCTTTCTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618451.1