RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP1R12A (Homo sapiens)

Ensembl gene IDs: ENSG00000058272

Ensembl transcript IDs: ENST00000261207.9, ENST00000437004.6, ENST00000450142.7, ENST00000546369.5, ENST00000546762.5, ENST00000547131.1, ENST00000547253.5, ENST00000547330.5, ENST00000548318.1, ENST00000548908.3, ENST00000550001.1, ENST00000550007.1, ENST00000550107.5, ENST00000550299.5, ENST00000550351.5, ENST00000550510.5, ENST00000550903.5, ENST00000551191.1, ENST00000551781.2, ENST00000552892.1, ENST00000553081.5, ENST00000634739.1, ENST00000650220.1

Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATaGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTGCT +
Preference number: 1 (lower is better)
Translates to: TVSKDSSQTSSDCQL*STGLLICAIPLLAA
Trigger: AGCAGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR GCA 90 bp CCGAAAATGACAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTaGCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTA +
Preference number: 1 (lower is better)
Translates to: PKMTVSKDSSQTSSD*QLWSTGLLICAIPL
Trigger: TAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTGTCATTTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR TCA 90 bp ACACAAAAGTATTTATGTACAACTAAGGCTTACTGGTTAAATATCTaGGGCATATCTGGCCTTGAACACTTTCCTTATATGCTGGAGCTG +
Preference number: 1 (lower is better)
Translates to: TQKYLCTTKAYWLNI*GISGLEHFPYMLEL
Trigger: CAGCTCCAGCATATAAGGAAAGTGTTCAAGGCCAGATATGCCTCAGATATTTAACCAGTAAGCCTTAGTTGTACATAAATACTTTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
3UTR-3UTR TCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCAC +
Preference number: 2 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGFPDFQ*LPIMVH
Trigger: GTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGCAGACTTCCAGTGACTaGCAATTATGGTCCACTGGG +
Preference number: 2 (lower is better)
Translates to: QSPRILPRLPVTANYGPLQTSSD*QLWSTG
Trigger: CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR GCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCCAGACTTCCAGTGACTaGCAATTATGGTCCACTGGG +
Preference number: 2 (lower is better)
Translates to: LDKRAFGRISENDSLQGFQTSSD*QLWSTG
Trigger: CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR TCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCAC +
Preference number: 2 (lower is better)
Translates to: ILDKRAFGRISENDSLQGFPDFQ*LPIMVH
Trigger: GTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAA...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR TCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCAC +
Preference number: 2 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPFPDFQ*LPIMVH
Trigger: GTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR TCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCAC +
Preference number: 2 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAFPDFQ*LPIMVH
Trigger: GTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
3UTR-3UTR GCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTGGGTTACTAATATGTaGAATTCCATTACTTGCTGC +
Preference number: 2 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGWVTNM*NSITCC
Trigger: GCAGCAAGTAATGGAATTGCACATATTAGTAACCCA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR CCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGCCAATTATGGTCCACTaGGTTACTAATATGTGCAAT +
Preference number: 2 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGPIMVH*VTNMCN
Trigger: ATTGCACATATTAGTAACCCAGTGGACCATAATTGG...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR GCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTGGGTTACTAATATGTaGAATTCCATTACTTGCTGC +
Preference number: 2 (lower is better)
Translates to: PRILPRLPVTANYGPLGYWVTNM*NSITCC
Trigger: GCAGCAAGTAATGGAATTGCACATATTAGTAACCCA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR TCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCACAGGATATCCGAAAATaGCAGTCTCCAAGGATTCTT +
Preference number: 2 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAQDIRK*QSPRIL
Trigger: AAGAATCCTTGGAGACTGTCATTTTCGGATATCCTG...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
3UTR-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATGGGTTACTAATATGTaGAATTCCATTACTTGCTGC +
Preference number: 2 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPWVTNM*NSITCC
Trigger: GCAGCAAGTAATGGAATTGCACATATTAGTAACCCA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR CCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGACCAATTATGGTCCACTaGGTTACTAATATGTGCAAT +
Preference number: 2 (lower is better)
Translates to: ILDKRAFGRISENDSLQGPIMVH*VTNMCN
Trigger: ATTGCACATATTAGTAACCCAGTGGACCATAATTGG...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR CCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTAGTGACTGCCAATTATaGTCCACTGGGTTACTAATA +
Preference number: 2 (lower is better)
Translates to: GRQHSISLIHDNNHRRASSDCQL*STGLLI
Trigger: TATTAGTAACCCAGTGGACCATAATTGGCAGTCACT...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
3UTR-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAAACATAGAAGACTCTaGCACATGAAGAGTTTAGAA +
Preference number: 2 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAKHRRL*HMKSLE
Trigger: TTCTAAACTCTTCATGTGGCAGAGTCTTCTATGTTT...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
3UTR-3UTR CCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAACTTTCCTTATATGCTaGAGCTGTAAACAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: GGRQHSISLIHDNNHRRATFLIC*SCKQVF
Trigger: GAAAACTTGTTTACAGCTCCAGCATATAAGGAAAGT...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
3UTR-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTAACACTTTCCTTATATaGTGGAGCTGTAAACAAGTT +
Preference number: 2 (lower is better)
Translates to: GRQHSISLIHDNNHRRASNTFLI*WSCKQV
Trigger: AACTTGTTTACAGCTCCAGCATATAAGGAAAGTGTT...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
3UTR-3UTR CCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCCAATTATGGTCCACTaGGTTACTAATATGTGCAAT +
Preference number: 2 (lower is better)
Translates to: ETKILDKRAFGRISENDSPIMVH*VTNMCN
Trigger: ATTGCACATATTAGTAACCCAGTGGACCATAATTGG...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR CCA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCCCAATTATGGTCCACTaGGTTACTAATATGTGCAAT +
Preference number: 2 (lower is better)
Translates to: GNNSAFNINSRVNSANDFPIMVH*VTNMCN
Trigger: ATTGCACATATTAGTAACCCAGTGGACCATAATTGG...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
3UTR GCA 72 bp ACAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTaGCAATTATGGTCCACTGGGTTACTAATATGTGCA +
Preference number: 3 (lower is better)
Translates to: TVSKDSSQTSSD*QLWSTGLLICA
Trigger: TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR TCA 72 bp AATGACAGTCTCCAAGGATTCTTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCACTGGGTTACTAATATG +
Preference number: 3 (lower is better)
Translates to: NDSLQGFFPDFQ*LPIMVHWVTNM
Trigger: CATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAGAGGCATATCTGGCCTaGAACACTTTCCTTATATGC +
Preference number: 3 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAEAYLA*NTFLIC
Trigger: GCATATAAGGAAAGTGTTCAAGGCCAGATATGCCTC...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
3UTR TCA 72 bp GGCTTACTGGTTAAATATCTGAGGCATATCTGGCCTTaGACACTTTCCTTATATGCTGGAGCTGTAAACAAG +
Preference number: 3 (lower is better)
Translates to: GLLVKYLRHIWP*TLSLYAGAVNK
Trigger: CTTGTTTACAGCTCCAGCATATAAGGAAAGTGTTCAAGGCCAGATATGCCTCAGATATTTAACCAGTAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
3UTR TCA 72 bp AGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTaGTGTAGAACTGGTTTCATATCTTTTCTGAAAGAT +
Preference number: 3 (lower is better)
Translates to: RATQQGIISITS*CRTGFISFLKD
Trigger: ATCTTTCAGAAAAGATATGAAACCAGTTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
3UTR CCA 72 bp AAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATaGTCCACTGGGTTACTAATATGTGCAATTCCATTA +
Preference number: 3 (lower is better)
Translates to: KDSSQTSSDCQL*STGLLICAIPL
Trigger: TAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
3UTR GCA 72 bp TCTGAGGCATATCTGGCCTTGAACACTTTCCTTATATaGTGGAGCTGTAAACAAGTTTTCTCAGTCATTAAA +
Preference number: 3 (lower is better)
Translates to: SEAYLALNTFLI*WSCKQVFSVIK
Trigger: TTTAATGACTGAGAAAACTTGTTTACAGCTCCAGCATATAAGGAAAGTGTTCAAGGCCAGATATGCCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
3UTR TCA 72 bp TATTTATGTACAACTAAGGCTTACTGGTTAAATATCTaGGGCATATCTGGCCTTGAACACTTTCCTTATATG +
Preference number: 3 (lower is better)
Translates to: YLCTTKAYWLNI*GISGLEHFPYM
Trigger: CATATAAGGAAAGTGTTCAAGGCCAGATATGCCTCAGATATTTAACCAGTAAGCCTTAGTTGTACATAAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACCCACATTGGCGTAATTaGTGTCGGCGCCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYPHWRN*CRRRGA
Trigger: TGCACCGCGGCGCCGACATCAATTACGCCAATGTGG...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGCTTCATCCCCTCTCCTaGCGCCGGGTCTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLLHPLS*RRVWKG
Trigger: TCCTTTCCAGACCCGGCGGCAGGAGAGGGGATGAAG...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR CCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGGGCCAGAGGAGGGCTaGGAACCCGGAGCCGACGCT +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGGPEEG*EPGADA
Trigger: AGCGTCGGCTCCGGGTTCCCAGCCCTCCTCTGGCCC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCGCGGTGCAGCAGCTTaGGGACCTCGTCCGTGTCGC +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIRGAAA*GPRPCR
Trigger: GCGACACGGACGAGGTCCTCAAGCTGCTGCACCGCG...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAATGTCGGCGCCGCGGTaGAGCAGCTTGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIMSAPR*SSLRTS
Trigger: CGAGGTCCTCAAGCTGCTGCACCGCGGCGCCGACAT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTGTTGTCCTGTCGGGCTaGGGGCTCCCGGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVVVLSG*GLPGIR
Trigger: CCGGATTCCCGGGAGCCCCCAGCCCGACAGGACAAC...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR CCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGTTGTCCTGTCGGGCTaGGGGCTCCCGGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGVVLSG*GLPGIR
Trigger: CCGGATTCCCGGGAGCCCCCAGCCCGACAGGACAAC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR CCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGTTCACCTTGGTCTTCTaGCGCTTCACCACCGGAGGC +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLFTLVF*RFTTGG
Trigger: GCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAA...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTCATCAATGCAAGCCTaGTGCAGGGCAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGSSMQA*CRAVSP
Trigger: CGGACTCACTGCCCTGCACCAGGCTTGCATTGATGA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTCGCGGTGCAGCAGCTTaGGGACCTCGTCCGTGTCGC +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLARGAAA*GPRPCR
Trigger: GCGACACGGACGAGGTCCTCAAGCTGCTGCACCGCG...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGGAAAGCAGGCTTTTCTaGAGCCCAGCTGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGESRLF*SPAAEV
Trigger: TACCTCTGCAGCTGGGCTTCAGAAAAGCCTGCTTTC...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTATGTCGGCGCCGCGGTaGAGCAGCTTGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVMSAPR*SSLRTS
Trigger: CGAGGTCCTCAAGCTGCTGCACCGCGGCGCCGACAT...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACCGTCGAACTTCACCTTaGTCTTCTGGCGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYRRTSP*SSGASP
Trigger: TGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACG...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCGCGGTGCAGCAGCTTaGGGACCTCGTCCGTGTCGC +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSRGAAA*GPRPCR
Trigger: GCGACACGGACGAGGTCCTCAAGCTGCTGCACCGCG...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCACCACATTGGCGTAATTaGTGTCGGCGCCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPPHWRN*CRRRGA
Trigger: TGCACCGCGGCGCCGACATCAATTACGCCAATGTGG...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTTCTGAAGCCCAGCTaGAGAGGTAACTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGFLKPS*RGNCWC
Trigger: ACACCAACAGTTACCTCTGCAGCTGGGCTTCAGAAA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACCAGACTTCCAGTGACTaGCAATTATGGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYQTSSD*QLWSTG
Trigger: CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCCTTCATCCCCTCTCCTaGCGCCGGGTCTTCTTATCG +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFLHPLS*RRVFLS
Trigger: CGATAAGAAGACCCGGCGGCAGGAGAGGGGATGAAG...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450142.7
CDS-3UTR CCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATCCGGAGGCCAGCAGTaGAACCGCAAGGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPSGGQQ*NRKALQ
Trigger: CTGTAGAGCCTTGCGGTTCCACTGCTGGCCTCCGGA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR CCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTCCTGCCGCCGGGTCTaGAAAGGAGGAAGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLASCRRV*KGGSGE
Trigger: TTCCCCGCTTCCTCCTTTCCAGACCCGGCGGCAGGA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR CCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTTCACCTTGGTCTTCTaGCGCTTCACCACCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFFTLVF*RFTTGG
Trigger: GCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGAAGAGGAGGAAAGTCTaGGACTTGAAGCTGAACGTG +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGKRRKV*DLKLNV
Trigger: CACGTTCAGCTTCAAGTCCCAGACTTTCCTCCTCTT...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGATGTAGGTGTTGCTTaGCCTGATGACACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLDVGVA*PDDTVG
Trigger: ACCTACTGTGTCATCAGGTCAAGCAACACCTACATC...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTCTTCATCCCCTCTCCTaGCGCCGGGTCTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLALHPLS*RRVWKG
Trigger: TCCTTTCCAGACCCGGCGGCAGGAGAGGGGATGAAG...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATCAATGCAAGCCTGGTaGAGGGCAGTGAGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRASMQAW*RAVSPS
Trigger: GGACGGACTCACTGCCCTGCACCAGGCTTGCATTGA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACAGCTGCAACGTGAAGTaGTGTACCTCCAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYSCNVK*CTSRFC
Trigger: GCAAAATCTGGAGGTACAGCACTTCACGTTGCAGCT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGATAGCCTTTAGCAGCTaGAACGTGAAGTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLIAFSS*NVKCCT
Trigger: GGTACAGCACTTCACGTTGCAGCTGCTAAAGGCTAT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTTTACCCCAATGAGCTaGAGCATGAAGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYFTPMS*SMKRCP
Trigger: TGGACACCTCTTCATGCTGCAGCTCATTGGGGTAAA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGAACAGGAATGGTCACTaGCGTAGGAACACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLNRNGH*RRNTVL
Trigger: AAGGACAGTGTTCCTACGGCAGTGACCATTCCTGTT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATATCTCCTTCACTGTTaGCAGCCCCTACATGTGCTC +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAYLLHC*QPLHVL
Trigger: GAGCACATGTAGGGGCTGTCAACAGTGAAGGAGATA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGCGGACATCATTTATATaGCCACTATTTAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGRTSFI*PLFSHC
Trigger: GCAGTGGCTAAATAGTGGTCATATAAATGATGTCCG...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTTTGGCCCACTTTGTTaGCCATCTCCATATCACACA +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYFGPLC*PSPYHT
Trigger: TGTGTGATATGGAGATGGTCAACAAAGTGGGCCAAA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGCAGGATATCCGAAAATaGCAGTCTCCAAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGQDIRK*QSPRIL
Trigger: AAGAATCCTTGGAGACTGTCATTTTCGGATATCCTG...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCCGTCGAACTTCACCTTaGTCTTCTGGCGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFRRTSP*SSGASP
Trigger: TGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACG...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATCATCAATGCAAGCCTaGTGCAGGGCAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPSSMQA*CRAVSP
Trigger: CGGACTCACTGCCCTGCACCAGGCTTGCATTGATGA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATTAGCAGCTGCAACGTaGAGTGCTGTACCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLILAAAT*SAVPPD
Trigger: ATCTGGAGGTACAGCACTTCACGTTGCAGCTGCTAA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGGTATCTTTTTCTTTCTaGCCCTCTTTAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGVSFSF*PSLDAV
Trigger: CACAGCATCTAAAGAGGGTCAGAAAGAAAAAGATAC...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGAAAGCAGGCTTTTCTaGAGCCCAGCTGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGESRLF*SPAAEV
Trigger: TACCTCTGCAGCTGGGCTTCAGAAAAGCCTGCTTTC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAGCTTTGTGTGCCTGCTaGGGAAGAACCCGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIALCAC*GRTRCN
Trigger: ATTACAACGGGTTCTTCCTCAGCAGGCACACAAAGC...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTTGGCCTGTTTAGTTaGCTTGAAGCATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGFGLFS*LEAYSE
Trigger: TTCACTGTATGCTTCAAGTCAACTAAACAGGCCAAA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACGGTCTGGTAACATTTTaGGCTCTTCTTCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYGLVTF*ALLPFQ
Trigger: CTGAAATGGAAGAAGAGCTCAAAATGTTACCAGACC...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIFPDFQ*LPIMVH
Trigger: GTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFFPDFQ*LPIMVH
Trigger: GTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACCAGGATATCCGAAAATaGCAGTCTCCAAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYQDIRK*QSPRIL
Trigger: AAGAATCCTTGGAGACTGTCATTTTCGGATATCCTG...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGAGGCATATCTGGCCTTaGACACTTTCCTTATATGCT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLRHIWP*TLSLYA
Trigger: AGCATATAAGGAAAGTGTTCAAGGCCAGATATGCCT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTACTGGTTAAATATCTaGGGCATATCTGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGYWLNI*GISGLE
Trigger: TTCAAGGCCAGATATGCCTCAGATATTTAACCAGTA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGGTCTTCTGTGAGAGCTaGAAGTTTTTGTTGACACAA +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGVFCES*KFLLTQ
Trigger: TTGTGTCAACAAAAACTTTCAGCTCTCACAGAAGAC...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTGTACCTCCAGATTTTaGATGCCGGACATCATTTAT +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGCTSRF*MPDIIY
Trigger: ATAAATGATGTCCGGCATGCAAAATCTGGAGGTACA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATAGCCTTTAGCAGCTaGAACGTGAAGTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAIAFSS*NVKCCT
Trigger: GGTACAGCACTTCACGTTGCAGCTGCTAAAGGCTAT...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATGTGATTTCAGCAAGTaGACCATAGCTGCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICACDFSK*TIAARL
Trigger: AAGACGGGCAGCTATGGTGCACTTGCTGAAATCACA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTGGAGTAGCCTACTCTaGATTAGCAGACATTTGAAA +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGWSSLL*ISRHLK
Trigger: TTTCAAATGTCTGCTAATGCAGAGTAGGCTACTCCA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTCCGGAGGCCAGCAGTaGAACCGCAAGGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSSGGQQ*NRKALQ
Trigger: CTGTAGAGCCTTGCGGTTCCACTGCTGGCCTCCGGA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR CCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTCATCAATGCAAGCCTaGTGCAGGGCAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASSSMQA*CRAVSP
Trigger: CGGACTCACTGCCCTGCACCAGGCTTGCATTGATGA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACCAATGTCAGATGTACTaGCTAGTCGTCTTGGTATTG +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYQCQMY*LVVLVL
Trigger: CAATACCAAGACGACTAGCCAGTACATCTGACATTG...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTCTTCTTTTCTCTCTTaGTCGTCGTCGTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYSSFLS*SSSFSD
Trigger: ATCAGAGAACGACGACGACCAAGAGAGAAAAGAAGA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACAATCTTTCTTGTCTCTaGGTGGCCTTTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYNLSCL*VAFSNC
Trigger: ACAGTTGGAAAAGGCCACCCAGAGACAAGAAAGATT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000450142.7
ENST00000634739.1
CDS-3UTR CCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGAGTGACTGCCAATTATaGTCCACTGGGTTACTAATA +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGSDCQL*STGLLI
Trigger: TATTAGTAACCCAGTGGACCATAATTGGCAGTCACT...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTGTTGTATCCTGTACTaGAGAGCTCTGGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFCCILY*RALGGL
Trigger: AAGGCCACCCAGAGCTCTCCAGTACAGGATACAACA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546762.5
CDS-3UTR TCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATTAGCAGCTGCAACGTaGAGTGCTGTACCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRALAAAT*SAVPPD
Trigger: ATCTGGAGGTACAGCACTTCACGTTGCAGCTGCTAA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTTTAGCAGCTGCAACGTaGAGTGCTGTACCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAILAAAT*SAVPPD
Trigger: ATCTGGAGGTACAGCACTTCACGTTGCAGCTGCTAA...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAGGTAACTGTTGGTGTTaGTGTGGTGCTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIGNCWC*CGAWNT
Trigger: AGTGTTCCAAGCACCACATCAACACCAACAGTTACC...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGCTTTGTGTGCCTGCTaGGGAAGAACCCGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGALCAC*GRTRCN
Trigger: ATTACAACGGGTTCTTCCTCAGCAGGCACACAAAGC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGCCCACAAACGATTTaGGGTACTGCTTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRASPQTI*GTALCA
Trigger: GGCACACAAAGCAGTACCTCAAATCGTTTGTGGGCT...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTAGCCCACAAACGATTTaGGGTACTGCTTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAISPQTI*GTALCA
Trigger: GGCACACAAAGCAGTACCTCAAATCGTTTGTGGGCT...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTTTGGCCTGTTTAGTTaGCTTGAAGCATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYFGLFS*LEAYSE
Trigger: TTCACTGTATGCTTCAAGTCAACTAAACAGGCCAAA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGTCCCTCTTCTGTGTCTaGTTGTTGTTCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLSLFCV*LLFLFI
Trigger: AATGAACAAGAACAACAATCAGACACAGAAGAGGGA...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACATATCGATCACCAGCTaGTGTAGAACTGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYISITS*CRTGFI
Trigger: TATGAAACCAGTTCTACATCAGCTGGTGATCGATAT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCACAACATTGTCATCAATaGAAGCCTGGTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAQHCHQ*KPGAGQ
Trigger: CTGCCCTGCACCAGGCTTGCATTGATGACAATGTTG...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGTGTACCTCCAGATTTTaGATGCCGGACATCATTTAT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLCTSRF*MPDIIY
Trigger: ATAAATGATGTCCGGCATGCAAAATCTGGAGGTACA...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAAGCTGCAACGTGAAGTaGTGTACCTCCAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLISCNVK*CTSRFC
Trigger: GCAAAATCTGGAGGTACAGCACTTCACGTTGCAGCT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATTTACCCCAATGAGCTaGAGCATGAAGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIFTPMS*SMKRCP
Trigger: TGGACACCTCTTCATGCTGCAGCTCATTGGGGTAAA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAGGTTGTGGTAGAAGCTaGAGCATTTACAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAGCGRS*SIYNSW
Trigger: CCAACTGTTGTAAATGCTGCAGCTTCTACCACAACC...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGCCTTTTCTAGCCTGCTaGTGTAAGGTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLPFLAC*CKVFFL
Trigger: AAGAAAGAAAACCTTACAGCAGCAGGCTAGAAAAGG...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACCATCCTTTTCTAGCCTaGTGCTGTAAGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYHPFLA*CCKVFF
Trigger: AAAGAAAACCTTACAGCAGCAGGCTAGAAAAGGATG...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGCATCCTTTTCTAGCCTaGTGCTGTAAGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLHPFLA*CCKVFF
Trigger: AAAGAAAACCTTACAGCAGCAGGCTAGAAAAGGATG...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGACAGACTTCCAGTGACTaGCAATTATGGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGQTSSD*QLWSTG
Trigger: CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTTCACCTTGGTCTTCTaGCGCTTCACCACCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSFTLVF*RFTTGG
Trigger: GCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTCGTCGAACTTCACCTTaGTCTTCTGGCGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLARRTSP*SSGASP
Trigger: TGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACG...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAAAGAGGAGGAAAGTCTaGGACTTGAAGCTGAACGTG +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIKRRKV*DLKLNV
Trigger: CACGTTCAGCTTCAAGTCCCAGACTTTCCTCCTCTT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGCTTTTGTTATTCCTCTaGAGTAAGCAGAAGTTATGC +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGLLLFL*SKQKLC
Trigger: GCATAACTTCTGCTTACTCCAGAGGAATAACAAAAG...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp GAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTAGAACTGGTTTCATCTTCTTTTCTCTCTTaGTCGTCGTCGTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ERPSKESYRSPADVELVSSSFLS*SSSFSD
Trigger: ATCAGAGAACGACGACGACCAAGAGAGAAAAGAAGA...TGAAACCAGTTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CCA 90 bp AACTGTATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTCATCCTTTAGCCTCTaGTTGTCTGCTTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: NCMIQSDPARNHIDHQLMSSFSL*LSAFRS
Trigger: AGACCTAAAAGCAGACAACCAGAGGCTAAAGGATGA...CATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACGTCAAGCATGCCATGTaGTGGTCTAAAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYVKHAM*WSKNQN
Trigger: GTTTTGATTTTTAGACCACCACATGGCATGCTTGAC...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTATCTCCTTCACTGTTaGCAGCCCCTACATGTGCTC +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAYLLHC*QPLHVL
Trigger: GAGCACATGTAGGGGCTGTCAACAGTGAAGGAGATA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATTTGGCCCACTTTGTTaGCCATCTCCATATCACACA +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIFGPLC*PSPYHT
Trigger: TGTGTGATATGGAGATGGTCAACAAAGTGGGCCAAA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAATCTGTTTCAGCTTCTaGTTCCGAGTCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIICFSF*FRVIFL
Trigger: GAGGAAGATGACTCGGAATCAGAAGCTGAAACAGAT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCATCTGTTTCAGCTTCTaGTTCCGAGTCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFICFSF*FRVIFL
Trigger: GAGGAAGATGACTCGGAATCAGAAGCTGAAACAGAT...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTGATGTAGGTGTTGCTTaGCCTGATGACACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIDVGVA*PDDTVG
Trigger: ACCTACTGTGTCATCAGGTCAAGCAACACCTACATC...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGATGTAGGTGTTGCTTaGCCTGATGACACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGDVGVA*PDDTVG
Trigger: ACCTACTGTGTCATCAGGTCAAGCAACACCTACATC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGAAACTTTTTAATAGGTaGTGTAGGTGTTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLKLFNR*CRCCLT
Trigger: GGTCAAGCAACACCTACATCACCTATTAAAAAGTTT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTGGTAACTGTTGGTGTTaGTGTGGTGCTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVGNCWC*CGAWNT
Trigger: AGTGTTCCAAGCACCACATCAACACCAACAGTTACC...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTGGTAACTGTTGGTGTTaGTGTGGTGCTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIGNCWC*CGAWNT
Trigger: AGTGTTCCAAGCACCACATCAACACCAACAGTTACC...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTGCTTTGTGTGCCTGCTaGGGAAGAACCCGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAALCAC*GRTRCN
Trigger: ATTACAACGGGTTCTTCCTCAGCAGGCACACAAAGC...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTAGCCCACAAACGATTTaGGGTACTGCTTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASSPQTI*GTALCA
Trigger: GGCACACAAAGCAGTACCTCAAATCGTTTGTGGGCT...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTGTCACTCCCTGTGTTaGTCTTCTAGATTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFCHSLC*SSRLSC
Trigger: GCAAGACAATCTAGAAGATCAACACAGGGAGTGACA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTAGAACTGGTTTCATTTGGCCTGTTTAGTTaGCTTGAAGCATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: ERPSKESYRSPADVELVSFGLFS*LEAYSE
Trigger: TTCACTGTATGCTTCAAGTCAACTAAACAGGCCAAA...TGAAACCAGTTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR TCA 90 bp AACTGTATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTCCCTCTTCTGTGTCTaGTTGTTGTTCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: NCMIQSDPARNHIDHQLMSLFCV*LLFLFI
Trigger: AATGAACAAGAACAACAATCAGACACAGAAGAGGGA...CATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR TCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTTCCATTTCCAACAGTaGTCTATCAGCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYFHFQQ*SISKSF
Trigger: GAAAGATTTGCTGATAGATCACTGTTGGAAATGGAA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASFPDFQ*LPIMVH
Trigger: GTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAAGGCATATCTGGCCTTaGACACTTTCCTTATATGCT +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICARHIWP*TLSLYA
Trigger: AGCATATAAGGAAAGTGTTCAAGGCCAGATATGCCT...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACATATTGCACAAACAGTaGAAGCATATGTTCCACCAA +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYILHKQ*KHMFHQ
Trigger: TTGGTGGAACATATGCTTTCACTGTTTGTGCAATAT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGATTTATTCAAATGGCTaGACTGTTCAGTGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLIYSNG*TVQWLR
Trigger: CCTTAACCACTGAACAGTTCAGCCATTTGAATAAAT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTCAACATTGTCATCAATaGAAGCCTGGTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASQHCHQ*KPGAGQ
Trigger: CTGCCCTGCACCAGGCTTGCATTGATGACAATGTTG...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCGACAGCCCCTACATGTaGTCCTTGACCAATCAAAAA +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFDSPYM*SLTNQK
Trigger: TTTTTGATTGGTCAAGGAGCACATGTAGGGGCTGTC...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATTCTTCCTTTCGAGCTaGTTCTATATCAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAFFLSS*FYINPL
Trigger: CAAGGGGTTGATATAGAAGCAGCTCGAAAGGAAGAA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCACCACTATTTAGCCACTaGCTGGCATCTCTAAGCATG +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAPLFSH*LASLSM
Trigger: CATGCTTAGAGATGCCAGGCAGTGGCTAAATAGTGG...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTAGCTGCAACGTGAAGTaGTGTACCTCCAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAISCNVK*CTSRFC
Trigger: GCAAAATCTGGAGGTACAGCACTTCACGTTGCAGCT...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTTACCCCAATGAGCTaGAGCATGAAGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPFTPMS*SMKRCP
Trigger: TGGACACCTCTTCATGCTGCAGCTCATTGGGGTAAA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATGTGATTTCAGCAAGTaGACCATAGCTGCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRACDFSK*TIAARL
Trigger: AAGACGGGCAGCTATGGTGCACTTGCTGAAATCACA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATGTGATTTCAGCAAGTaGACCATAGCTGCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPCDFSK*TIAARL
Trigger: AAGACGGGCAGCTATGGTGCACTTGCTGAAATCACA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTTCTGAAGCCCAGCTaGAGAGGTAACTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPFLKPS*RGNCWC
Trigger: ACACCAACAGTTACCTCTGCAGCTGGGCTTCAGAAA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTAGAACTGGTTTCACCTTTTCTAGCCTGCTaGTGTAAGGTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ERPSKESYRSPADVELVSPFLAC*CKVFFL
Trigger: AAGAAAGAAAACCTTACAGCAGCAGGCTAGAAAAGG...TGAAACCAGTTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGTGGGTTACTAATATGTaGAATTCCATTACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLWVTNM*NSITCC
Trigger: GCAGCAAGTAATGGAATTGCACATATTAGTAACCCA...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGAATCTTCTCAGCAGCTaGATTAACATGAAACAATGG +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLNLLSS*INMKQW
Trigger: CCATTGTTTCATGTTAATGCAGCTGCTGAGAAGATT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAAAGAGGAGGAAAGTCTaGGACTTGAAGCTGAACGTG +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPKRRKV*DLKLNV
Trigger: CACGTTCAGCTTCAAGTCCCAGACTTTCCTCCTCTT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCACAATGTCAGATGTACTaGCTAGTCGTCTTGGTATTG +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAQCQMY*LVVLVL
Trigger: CAATACCAAGACGACTAGCCAGTACATCTGACATTG...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACCTTTTGTTATTCCTCTaGAGTAAGCAGAAGTTATGC +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYLLLFL*SKQKLC
Trigger: GCATAACTTCTGCTTACTCCAGAGGAATAACAAAAG...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATCTTCTTTTCTCTCTTaGTCGTCGTCGTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICASSFLS*SSSFSD
Trigger: ATCAGAGAACGACGACGACCAAGAGAGAAAAGAAGA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp TATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTAGAAAATCTTTCTTGTCTCTaGGTGGCCTTTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: YDPERPSKESYRSPADVENLSCL*VAFSNC
Trigger: ACAGTTGGAAAAGGCCACCCAGAGACAAGAAAGATT...TTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CCA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTTTTAACACTATCATaGAGTAGCCTACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGFLTLS*SSLLCI
Trigger: AATGCAGAGTAGGCTACTCCATGATAGTGTTAAAAA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCACTGGAGAGCTCTGGGTaGCCTTTTCCAACTGTAATT +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPLESSG*PFPTVI
Trigger: AATTACAGTTGGAAAAGGCCACCCAGAGCTCTCCAG...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546762.5
CDS-3UTR TCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATTTGGCCCACTTTGTTaGCCATCTCCATATCACACA +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAFGPLC*PSPYHT
Trigger: TGTGTGATATGGAGATGGTCAACAAAGTGGGCCAAA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTGAAAGCAGGCTTTTCTaGAGCCCAGCTGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSESRLF*SPAAEV
Trigger: TACCTCTGCAGCTGGGCTTCAGAAAAGCCTGCTTTC...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTTGTCACTCCCTGTGTTaGTCTTCTAGATTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVCHSLC*SSRLSC
Trigger: GCAAGACAATCTAGAAGATCAACACAGGGAGTGACA...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATCCCTCTTCTGTGTCTaGTTGTTGTTCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICASLFCV*LLFLFI
Trigger: AATGAACAAGAACAACAATCAGACACAGAAGAGGGA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCGGTCTGGTAACATTTTaGGCTCTTCTTCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFGLVTF*ALLPFQ
Trigger: CTGAAATGGAAGAAGAGCTCAAAATGTTACCAGACC...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATACAGGATATCCGAAAATaGCAGTCTCCAAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIQDIRK*QSPRIL
Trigger: AAGAATCCTTGGAGACTGTCATTTTCGGATATCCTG...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAAGGCATATCTGGCCTTaGACACTTTCCTTATATGCT +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIRHIWP*TLSLYA
Trigger: AGCATATAAGGAAAGTGTTCAAGGCCAGATATGCCT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAGACAGCCCCTACATGTaGTCCTTGACCAATCAAAAA +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPDSPYM*SLTNQK
Trigger: TTTTTGATTGGTCAAGGAGCACATGTAGGGGCTGTC...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGACAGCCCCTACATGTaGTCCTTGACCAATCAAAAA +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGDSPYM*SLTNQK
Trigger: TTTTTGATTGGTCAAGGAGCACATGTAGGGGCTGTC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTCCACTATTTAGCCACTaGCTGGCATCTCTAAGCATG +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASPLFSH*LASLSM
Trigger: CATGCTTAGAGATGCCAGGCAGTGGCTAAATAGTGG...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACAGATTCAATACGGGATaGATTTTTCTCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYRFNTG*IFLWFN
Trigger: ATTGAACCAGAGAAAAATGCATCCCGTATTGAATCT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCAACAGCTACAGGAGCTaGTTGTGTACTAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFNSYRS*LCTRSV
Trigger: AACACTTCTAGTACACAAGCAGCTCCTGTAGCTGTT...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCACTGACCCTCTTTAGATaGTGTGATTTCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPLTLFR*CDFSKC
Trigger: GCACTTGCTGAAATCACAGCATCTAAAGAGGGTCAG...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATCTTGGTATTGTAGGTaGAACATATGCAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICASWYCR*NICKPS
Trigger: ACTAGGCTTGCATATGTTGCACCTACAATACCAAGA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTAACAGGAATGGTCACTaGCGTAGGAACACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASNRNGH*RRNTVL
Trigger: AAGGACAGTGTTCCTACGGCAGTGACCATTCCTGTT...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAGGTTGTGGTAGAAGCTaGAGCATTTACAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAGCGRS*SIYNSW
Trigger: CCAACTGTTGTAAATGCTGCAGCTTCTACCACAACC...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGTCTTCTAGATTGTCTTaGTTGTCTAGATCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLSSRLS*LSRSCF
Trigger: AAAGCAAGATCTAGACAAGCAAGACAATCTAGAAGA...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCACCTTTTCTAGCCTGCTaGTGTAAGGTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAPFLAC*CKVFFL
Trigger: AAGAAAGAAAACCTTACAGCAGCAGGCTAGAAAAGG...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCACATCCTTTTCTAGCCTaGTGCTGTAAGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAHPFLA*CCKVFF
Trigger: AAAGAAAACCTTACAGCAGCAGGCTAGAAAAGGATG...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp CTAAGTAACTGTATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGCATCCTTTTCTAGCCTaGTGCTGTAAGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSNCMIQSDPARNHIDHQHPFLA*CCKVFF
Trigger: AAAGAAAACCTTACAGCAGCAGGCTAGAAAAGGATG...CTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATACAGTTACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR GCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGAAACATAGAAGACTCTaGCACATGAAGAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLKHRRL*HMKSLE
Trigger: TTCTAAACTCTTCATGTGGCAGAGTCTTCTATGTTT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACAAGGAGACAGTTATGTaGCAGAAAGATGTAGTATTT +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYKETVM*QKDVVF
Trigger: AAATACTACATCTTTCTGGCACATAACTGTCTCCTT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATTGCAACTAGTTTCATaGAGAAACAAGGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICALQLVS*RNKVCS
Trigger: TGAGCAGACCTTGTTTCTGCATGAAACTAGTTGCAA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR GCA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCGAATGTTTCTATGAGTaGGGGCCAGAGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNNSAFNINSRVNSANDFECFYE*GPEEGW
Trigger: CCAGCCCTCCTCTGGCCCGCACTCATAGAAACATTC...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450142.7
CDS-3UTR CCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTCCCGTTTTTCACTATaGAGCAGATTTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYSRFSL*SRFCFF
Trigger: AAAGAAACAAAATCTGCTCCATAGTGAAAAACGGGA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp TATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTAGAAGTGAAGAGGATGGAGTaGTTGAACTTGAAGTTGATA +
Preference number: 4 (lower is better)
Translates to: YDPERPSKESYRSPADVEVKRME*LNLKLI
Trigger: TATCAACTTCAAGTTCAACCACTCCATCCTCTTCAC...TTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTCTTCTTTTCTCTCTTaGTCGTCGTCGTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFSSFLS*SSSFSD
Trigger: ATCAGAGAACGACGACGACCAAGAGAGAAAAGAAGA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCAATCTTTCTTGTCTCTaGGTGGCCTTTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFNLSCL*VAFSNC
Trigger: ACAGTTGGAAAAGGCCACCCAGAGACAAGAAAGATT...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000450142.7
ENST00000634739.1
CDS-3UTR CCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATCATCCTTTAGCCTCTaGTTGTCTGCTTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLISSFSL*LSAFRS
Trigger: AGACCTAAAAGCAGACAACCAGAGGCTAAAGGATGA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTCATCCTTTAGCCTCTaGTTGTCTGCTTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFSSFSL*LSAFRS
Trigger: AGACCTAAAAGCAGACAACCAGAGGCTAAAGGATGA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACACTTTCCTTATATGCTaGAGCTGTAAACAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: PRILPRLPVTANYGPLGYTFLIC*SCKQVF
Trigger: GAAAACTTGTTTACAGCTCCAGCATATAAGGAAAGT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGACTTTCCTTATATGCTaGAGCTGTAAACAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLTFLIC*SCKQVF
Trigger: GAAAACTTGTTTACAGCTCCAGCATATAAGGAAAGT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGTTTTTAACACTATCATaGAGTAGCCTACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: QSPRILPRLPVTANYGPLFLTLS*SSLLCI
Trigger: AATGCAGAGTAGGCTACTCCATGATAGTGTTAAAAA...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTATCTCCTTCACTGTTaGCAGCCCCTACATGTGCTC +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSYLLHC*QPLHVL
Trigger: GAGCACATGTAGGGGCTGTCAACAGTGAAGGAGATA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAGTATCTTTTTCTTTCTaGCCCTCTTTAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIVSFSF*PSLDAV
Trigger: CACAGCATCTAAAGAGGGTCAGAAAGAAAAAGATAC...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAATATCGATCACCAGCTaGTGTAGAACTGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIISITS*CRTGFI
Trigger: TATGAAACCAGTTCTACATCAGCTGGTGATCGATAT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTGGTCTGGTAACATTTTaGGCTCTTCTTCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIGLVTF*ALLPFQ
Trigger: CTGAAATGGAAGAAGAGCTCAAAATGTTACCAGACC...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAGGTCTGGTAACATTTTaGGCTCTTCTTCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPGLVTF*ALLPFQ
Trigger: CTGAAATGGAAGAAGAGCTCAAAATGTTACCAGACC...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTTCCCAGACTTCCAGTaGCTGCCAATTATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSFPDFQ*LPIMVH
Trigger: GTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTCAGGATATCCGAAAATaGCAGTCTCCAAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVQDIRK*QSPRIL
Trigger: AAGAATCCTTGGAGACTGTCATTTTCGGATATCCTG...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGGCATATCTGGCCTTaGACACTTTCCTTATATGCT +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRARHIWP*TLSLYA
Trigger: AGCATATAAGGAAAGTGTTCAAGGCCAGATATGCCT...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCGTCTTCTGTGAGAGCTaGAAGTTTTTGTTGACACAA +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFVFCES*KFLLTQ
Trigger: TTGTGTCAACAAAAACTTTCAGCTCTCACAGAAGAC...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCAACATTGTCATCAATaGAAGCCTGGTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSQHCHQ*KPGAGQ
Trigger: CTGCCCTGCACCAGGCTTGCATTGATGACAATGTTG...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAAACAGCTACAGGAGCTaGTTGTGTACTAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPNSYRS*LCTRSV
Trigger: AACACTTCTAGTACACAAGCAGCTCCTGTAGCTGTT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTAACAGCTACAGGAGCTaGTTGTGTACTAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVNSYRS*LCTRSV
Trigger: AACACTTCTAGTACACAAGCAGCTCCTGTAGCTGTT...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTCTGACCCTCTTTAGATaGTGTGATTTCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLALTLFR*CDFSKC
Trigger: GCACTTGCTGAAATCACAGCATCTAAAGAGGGTCAG...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTCTGACCCTCTTTAGATaGTGTGATTTCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASLTLFR*CDFSKC
Trigger: GCACTTGCTGAAATCACAGCATCTAAAGAGGGTCAG...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATACCTTTTCTAGCCTGCTaGTGTAAGGTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIPFLAC*CKVFFL
Trigger: AAGAAAGAAAACCTTACAGCAGCAGGCTAGAAAAGG...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCCATCCTTTTCTAGCCTaGTGCTGTAAGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFHPFLA*CCKVFF
Trigger: AAAGAAAACCTTACAGCAGCAGGCTAGAAAAGGATG...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATGGGTTACTAATATGTaGAATTCCATTACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAWVTNM*NSITCC
Trigger: GCAGCAAGTAATGGAATTGCACATATTAGTAACCCA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCAGACTTCCAGTGACTaGCAATTATGGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSQTSSD*QLWSTG
Trigger: CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGAGGACTTAAAATCCTaGTTACCAAAACACCCTTCC +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGEDLKS*LPKHPS
Trigger: GGAAGGGTGTTTTGGTAAGCAGGATTTTAAGTCCTC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAGAGGACTTAAAATCCTaGTTACCAAAACACCCTTCC +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAEDLKS*LPKHPS
Trigger: GGAAGGGTGTTTTGGTAAGCAGGATTTTAAGTCCTC...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR GCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTTGCAACTAGTTTCATaGAGAAACAAGGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFLQLVS*RNKVCS
Trigger: TGAGCAGACCTTGTTTCTGCATGAAACTAGTTGCAA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR GCA 90 bp TATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTAGAAATCTTTTCTGAAAGATaGCATTGGCTCTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: YDPERPSKESYRSPADVEIFSER*HWLCIS
Trigger: TGAAATGCAGAGCCAATGGCATCTTTCAGAAAAGAT...TTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTTCTTCTTTTCTCTCTTaGTCGTCGTCGTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVSSFLS*SSSFSD
Trigger: ATCAGAGAACGACGACGACCAAGAGAGAAAAGAAGA...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTTCATCCTTTAGCCTCTaGTTGTCTGCTTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAISSFSL*LSAFRS
Trigger: AGACCTAAAAGCAGACAACCAGAGGCTAAAGGATGA...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAAGTGACTGCCAATTATaGTCCACTGGGTTACTAATA +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLISDCQL*STGLLI
Trigger: TATTAGTAACCCAGTGGACCATAATTGGCAGTCACT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCGTCAAGCATGCCATGTaGTGGTCTAAAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFVKHAM*WSKNQN
Trigger: GTTTTGATTTTTAGACCACCACATGGCATGCTTGAC...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTGTACTGGAGAGCTCTaGGTGGCCTTTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSCTGEL*VAFSNC
Trigger: ACAGTTGGAAAAGGCCACCCAGAGCTCTCCAGTACA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546762.5
CDS-3UTR TCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTCGGACATCATTTATATaGCCACTATTTAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLARTSFI*PLFSHC
Trigger: GCAGTGGCTAAATAGTGGTCATATAAATGATGTCCG...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTTGGCCTGTTTAGTTaGCTTGAAGCATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGFGLFS*LEAYSE
Trigger: TTCACTGTATGCTTCAAGTCAACTAAACAGGCCAAA...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATCCCTCTTCTGTGTCTaGTTGTTGTTCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGSLFCV*LLFLFI
Trigger: AATGAACAAGAACAACAATCAGACACAGAAGAGGGA...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAATATCGATCACCAGCTaGTGTAGAACTGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAISITS*CRTGFI
Trigger: TATGAAACCAGTTCTACATCAGCTGGTGATCGATAT...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTTCCATTTCCAACAGTaGTCTATCAGCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFFHFQQ*SISKSF
Trigger: GAAAGATTTGCTGATAGATCACTGTTGGAAATGGAA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATTCCATTTCCAACAGTaGTCTATCAGCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIFHFQQ*SISKSF
Trigger: GAAAGATTTGCTGATAGATCACTGTTGGAAATGGAA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATACTGGTTAAATATCTaGGGCATATCTGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGYWLNI*GISGLE
Trigger: TTCAAGGCCAGATATGCCTCAGATATTTAACCAGTA...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAGTCTTCTGTGAGAGCTaGAAGTTTTTGTTGACACAA +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPVFCES*KFLLTQ
Trigger: TTGTGTCAACAAAAACTTTCAGCTCTCACAGAAGAC...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCATTTATTCAAATGGCTaGACTGTTCAGTGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFIYSNG*TVQWLR
Trigger: CCTTAACCACTGAACAGTTCAGCCATTTGAATAAAT...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTTCTTCCTTTCGAGCTaGTTCTATATCAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAFFLSS*FYINPL
Trigger: CAAGGGGTTGATATAGAAGCAGCTCGAAAGGAAGAA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATGTAGGTGCAACATATaGAAGCCTAGTTCCTTTACT +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRACRCNI*KPSSFT
Trigger: AGTAAAGGAACTAGGCTTGCATATGTTGCACCTACA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATGTAGGTGCAACATATaGAAGCCTAGTTCCTTTACT +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGCRCNI*KPSSFT
Trigger: AGTAAAGGAACTAGGCTTGCATATGTTGCACCTACA...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATCTTGGTATTGTAGGTaGAACATATGCAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGSWYCR*NICKPS
Trigger: ACTAGGCTTGCATATGTTGCACCTACAATACCAAGA...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTAACAGGAATGGTCACTaGCGTAGGAACACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSNRNGH*RRNTVL
Trigger: AAGGACAGTGTTCCTACGGCAGTGACCATTCCTGTT...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCACATCCTTTTCTAGCCTaGTGCTGTAAGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPHPFLA*CCKVFF
Trigger: AAAGAAAACCTTACAGCAGCAGGCTAGAAAAGGATG...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATGGAGTAGCCTACTCTaGATTAGCAGACATTTGAAA +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPWSSLL*ISRHLK
Trigger: TTTCAAATGTCTGCTAATGCAGAGTAGGCTACTCCA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATTGCATTTACAGATGTaGATGTACAATGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLILHLQM*MYNAVQ
Trigger: TTGCACAGCATTGTACATGCACATCTGTAAATGCAA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR CCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGTGAAGAGGATGGAGTaGTTGAACTTGAAGTTGATA +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGVKRME*LNLKLI
Trigger: TATCAACTTCAAGTTCAACCACTCCATCCTCTTCAC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTGTGAAGAGGATGGAGTaGTTGAACTTGAAGTTGATA +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVVKRME*LNLKLI
Trigger: TATCAACTTCAAGTTCAACCACTCCATCCTCTTCAC...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATACCAATTATGGTCCACTaGGTTACTAATATGTGCAAT +
Preference number: 4 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIPIMVH*VTNMCN
Trigger: ATTGCACATATTAGTAACCCAGTGGACCATAATTGG...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTGTCAAGCATGCCATGTaGTGGTCTAAAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVVKHAM*WSKNQN
Trigger: GTTTTGATTTTTAGACCACCACATGGCATGCTTGAC...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTAAACTTTTTAATAGGTaGTGTAGGTGTTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIKLFNR*CRCCLT
Trigger: GGTCAAGCAACACCTACATCACCTATTAAAAAGTTT...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTAAACTTTTTAATAGGTaGTGTAGGTGTTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVKLFNR*CRCCLT
Trigger: GGTCAAGCAACACCTACATCACCTATTAAAAAGTTT...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTGTTTTCTCAGCTTCTTaGAGATCAGTTAATGTCACT +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIVFSAS*RSVNVT
Trigger: AGTGACATTAACTGATCTTCAAGAAGCTGAGAAAAC...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTGTTTTCTCAGCTTCTTaGAGATCAGTTAATGTCACT +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVVFSAS*RSVNVT
Trigger: AGTGACATTAACTGATCTTCAAGAAGCTGAGAAAAC...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTTTGGCCTGTTTAGTTaGCTTGAAGCATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAFGLFS*LEAYSE
Trigger: TTCACTGTATGCTTCAAGTCAACTAAACAGGCCAAA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTCCCTCTTCTGTGTCTaGTTGTTGTTCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLASLFCV*LLFLFI
Trigger: AATGAACAAGAACAACAATCAGACACAGAAGAGGGA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATTCCATTTCCAACAGTaGTCTATCAGCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAFHFQQ*SISKSF
Trigger: GAAAGATTTGCTGATAGATCACTGTTGGAAATGGAA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTCCATTTCCAACAGTaGTCTATCAGCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPFHFQQ*SISKSF
Trigger: GAAAGATTTGCTGATAGATCACTGTTGGAAATGGAA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTACTGGTTAAATATCTaGGGCATATCTGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASYWLNI*GISGLE
Trigger: TTCAAGGCCAGATATGCCTCAGATATTTAACCAGTA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTATTTATTCAAATGGCTaGACTGTTCAGTGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: VDASSHGNNSAFNINSRVIYSNG*TVQWLR
Trigger: CCTTAACCACTGAACAGTTCAGCCATTTGAATAAAT...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTGTACCTCCAGATTTTaGATGCCGGACATCATTTAT +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASCTSRF*MPDIIY
Trigger: ATAAATGATGTCCGGCATGCAAAATCTGGAGGTACA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTCCTTTTCTAGCCTGCTaGTGTAAGGTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASPFLAC*CKVFFL
Trigger: AAGAAAGAAAACCTTACAGCAGCAGGCTAGAAAAGG...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAAATCTTCTCAGCAGCTaGATTAACATGAAACAATGG +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPNLLSS*INMKQW
Trigger: CCATTGTTTCATGTTAATGCAGCTGCTGAGAAGATT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR GCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCAACACTTTCCTTATATaGTGGAGCTGTAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFNTFLI*WSCKQV
Trigger: AACTTGTTTACAGCTCCAGCATATAAGGAAAGTGTT...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR GCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTGGAGTAGCCTACTCTaGATTAGCAGACATTTGAAA +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAWSSLL*ISRHLK
Trigger: TTTCAAATGTCTGCTAATGCAGAGTAGGCTACTCCA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCTCCCGTTTTTCACTATaGAGCAGATTTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LDKRAFGRISENDSLQGFSRFSL*SRFCFF
Trigger: AAAGAAACAAAATCTGCTCCATAGTGAAAAACGGGA...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTGTGAAGAGGATGGAGTaGTTGAACTTGAAGTTGATA +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAVKRME*LNLKLI
Trigger: TATCAACTTCAAGTTCAACCACTCCATCCTCTTCAC...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTAGTGACTGCCAATTATaGTCCACTGGGTTACTAATA +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLASDCQL*STGLLI
Trigger: TATTAGTAACCCAGTGGACCATAATTGGCAGTCACT...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR TCA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCATCTGTTTCAGCTTCTaGTTCCGAGTCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GNNSAFNINSRVNSANDFICFSF*FRVIFL
Trigger: GAGGAAGATGACTCGGAATCAGAAGCTGAAACAGAT...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTGTTTTCTCAGCTTCTTaGAGATCAGTTAATGTCACT +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASVFSAS*RSVNVT
Trigger: AGTGACATTAACTGATCTTCAAGAAGCTGAGAAAAC...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCAGGATATCCGAAAATaGCAGTCTCCAAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSQDIRK*QSPRIL
Trigger: AAGAATCCTTGGAGACTGTCATTTTCGGATATCCTG...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTTCTTCTAGATTGTCTTaGTTGTCTAGATCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAISSRLS*LSRSCF
Trigger: AAAGCAAGATCTAGACAAGCAAGACAATCTAGAAGA...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTGGGTTACTAATATGTaGAATTCCATTACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASWVTNM*NSITCC
Trigger: GCAGCAAGTAATGGAATTGCACATATTAGTAACCCA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTAACACTTTCCTTATATaGTGGAGCTGTAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: QTSSDCQLWSTGLLICAINTFLI*WSCKQV
Trigger: AACTTGTTTACAGCTCCAGCATATAAGGAAAGTGTT...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAACACTTTCCTTATATaGTGGAGCTGTAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRANTFLI*WSCKQV
Trigger: AACTTGTTTACAGCTCCAGCATATAAGGAAAGTGTT...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAAACACTTTCCTTATATaGTGGAGCTGTAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPNTFLI*WSCKQV
Trigger: AACTTGTTTACAGCTCCAGCATATAAGGAAAGTGTT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR GCA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAAAACATAGAAGACTCTaGCACATGAAGAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPKHRRL*HMKSLE
Trigger: TTCTAAACTCTTCATGTGGCAGAGTCTTCTATGTTT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATGCAGAAACAAGGTCTaGTCAATACTACCAATAAAA +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRACRNKV*SILPIK
Trigger: TTTTATTGGTAGTATTGAGCAGACCTTGTTTCTGCA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR GCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTTGCATTTACAGATGTaGATGTACAATGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLALHLQM*MYNAVQ
Trigger: TTGCACAGCATTGTACATGCACATCTGTAAATGCAA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR CCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCAATGTCAGATGTACTaGCTAGTCGTCTTGGTATTG +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSQCQMY*LVVLVL
Trigger: CAATACCAAGACGACTAGCCAGTACATCTGACATTG...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTCTTTTGTTATTCCTCTaGAGTAAGCAGAAGTTATGC +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASLLLFL*SKQKLC
Trigger: GCATAACTTCTGCTTACTCCAGAGGAATAACAAAAG...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTCATCCTTTAGCCTCTaGTTGTCTGCTTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSSSFSL*LSAFRS
Trigger: AGACCTAAAAGCAGACAACCAGAGGCTAAAGGATGA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTCCAATTATGGTCCACTaGGTTACTAATATGTGCAAT +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAPIMVH*VTNMCN
Trigger: ATTGCACATATTAGTAACCCAGTGGACCATAATTGG...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGACTCCACATAAGACCATaGAAATTCTCAATATTCAGA +
Preference number: 4 (lower is better)
Translates to: ILDKRAFGRISENDSLQGLHIRP*KFSIFR
Trigger: TCTGAATATTGAGAATTTCCATGGTCTTATGTGGAG...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR CCA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCACTCCACATAAGACCATaGAAATTCTCAATATTCAGA +
Preference number: 4 (lower is better)
Translates to: GGRQHSISLIHDNNHRRALHIRP*KFSIFR
Trigger: TCTGAATATTGAGAATTTCCATGGTCTTATGTGGAG...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000450142.7
CDS-3UTR TCA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCCGGACATCATTTATATaGCCACTATTTAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GNNSAFNINSRVNSANDFRTSFI*PLFSHC
Trigger: GCAGTGGCTAAATAGTGGTCATATAAATGATGTCCG...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTATATCGATCACCAGCTaGTGTAGAACTGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSISITS*CRTGFI
Trigger: TATGAAACCAGTTCTACATCAGCTGGTGATCGATAT...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR TCA 90 bp TCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCATGTAGCTGTGCCGGTCTGGTAACATTTTaGGCTCTTCTTCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: SNCNLRSVSSIFVSCSCAGLVTF*ALLPFQ
Trigger: CTGAAATGGAAGAAGAGCTCAAAATGTTACCAGACC...GGCACAGCTACATGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR GCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTAGATTCAATACGGGATaGATTTTTCTCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASRFNTG*IFLWFN
Trigger: ATTGAACCAGAGAAAAATGCATCCCGTATTGAATCT...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTCTTGGTATTGTAGGTaGAACATATGCAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSSWYCR*NICKPS
Trigger: ACTAGGCTTGCATATGTTGCACCTACAATACCAAGA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTCTTCTAGATTGTCTTaGTTGTCTAGATCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLASSRLS*LSRSCF
Trigger: AAAGCAAGATCTAGACAAGCAAGACAATCTAGAAGA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCCTTTTCTAGCCTGCTaGTGTAAGGTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSPFLAC*CKVFFL
Trigger: AAGAAAGAAAACCTTACAGCAGCAGGCTAGAAAAGG...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR GCA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTAAGGAGACAGTTATGTaGCAGAAAGATGTAGTATTT +
Preference number: 4 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAKETVM*QKDVVF
Trigger: AAATACTACATCTTTCTGGCACATAACTGTCTCCTT...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTAGTGACTGCCAATTATaGTCCACTGGGTTACTAATA +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSSDCQL*STGLLI
Trigger: TATTAGTAACCCAGTGGACCATAATTGGCAGTCACT...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CCA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTTTTTAACACTATCATaGAGTAGCCTACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: GRQHSISLIHDNNHRRASFLTLS*SSLLCI
Trigger: AATGCAGAGTAGGCTACTCCATGATAGTGTTAAAAA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCGTATCTTTTTCTTTCTaGCCCTCTTTAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: GNNSAFNINSRVNSANDFVSFSF*PSLDAV
Trigger: CACAGCATCTAAAGAGGGTCAGAAAGAAAAAGATAC...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR TCA 90 bp TGGGTGGCCTTTTCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCAATATCGATCACCAGCTaGTGTAGAACTGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: WVAFSNCNLRSVSSIFVSISITS*CRTGFI
Trigger: TATGAAACCAGTTCTACATCAGCTGGTGATCGATAT...TGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGAAAAGGCCACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR TCA 90 bp TCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCATGTAGCTGTGCCTTCCATTTCCAACAGTaGTCTATCAGCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: SNCNLRSVSSIFVSCSCAFHFQQ*SISKSF
Trigger: GAAAGATTTGCTGATAGATCACTGTTGGAAATGGAA...GGCACAGCTACATGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR TCA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCATATTGCACAAACAGTaGAAGCATATGTTCCACCAA +
Preference number: 4 (lower is better)
Translates to: GNNSAFNINSRVNSANDFILHKQ*KHMFHQ
Trigger: TTGGTGGAACATATGCTTTCACTGTTTGTGCAATAT...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTAGATTCAATACGGGATaGATTTTTCTCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: ETKILDKRAFGRISENDSRFNTG*IFLWFN
Trigger: ATTGAACCAGAGAAAAATGCATCCCGTATTGAATCT...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR GCA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCAATCTTCTCAGCAGCTaGATTAACATGAAACAATGG +
Preference number: 4 (lower is better)
Translates to: GNNSAFNINSRVNSANDFNLLSS*INMKQW
Trigger: CCATTGTTTCATGTTAATGCAGCTGCTGAGAAGATT...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CCA 90 bp TGGGTGGCCTTTTCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCACTTTTGTTATTCCTCTaGAGTAAGCAGAAGTTATGC +
Preference number: 4 (lower is better)
Translates to: WVAFSNCNLRSVSSIFVSLLLFL*SKQKLC
Trigger: GCATAACTTCTGCTTACTCCAGAGGAATAACAAAAG...TGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGAAAAGGCCACCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CCA 90 bp TGGGTGGCCTTTTCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCATCTGAAAGATGCCATTaGCTCTGCATTTCAATTCAA +
Preference number: 4 (lower is better)
Translates to: WVAFSNCNLRSVSSIFVSSERCH*LCISIQ
Trigger: TTGAATTGAAATGCAGAGCCAATGGCATCTTTCAGA...TGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGAAAAGGCCACCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS GCA 90 bp TCCGTCTCGGAGCCGATCCAGCGTTTCAGCTGCTCGTTCCGCTTCTaGTTCGCGTCCGCCATCTTCATCCCCTCTCCTGCCGCCGGGTCT +
Preference number: 5 (lower is better)
Translates to: SVSEPIQRFSCSFRF*FASAIFIPSPAAGS
Trigger: AGACCCGGCGGCAGGAGAGGGGATGAAGATGGCGGACGCGAAGCAGAAGCGGAACGAGCAGCTGAAACGCTGGATCGGCTCCGAGACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
CDS CCA 90 bp GCAGCCAGGAAGACGGCGCCATCGTCGAACTTCACCTTGGTCTTCTaGCGCTTCACCACCGGAGGCTCGAGGTCCGTCTCGGAGCCGATC +
Preference number: 5 (lower is better)
Translates to: AARKTAPSSNFTLVF*RFTTGGSRSVSEPI
Trigger: GATCGGCTCCGAGACGGACCTCGAGCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGATGGCGCCGTCTTCCTGGCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
ENST00000550107.5
CDS GCA 90 bp ACCGGAGGCTCGAGGTCCGTCTCGGAGCCGATCCAGCGTTTCAGCTaGTCGTTCCGCTTCTGCTTCGCGTCCGCCATCTTCATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: TGGSRSVSEPIQRFS*SFRFCFASAIFIPS
Trigger: AGAGGGGATGAAGATGGCGGACGCGAAGCAGAAGCGGAACGAGCAGCTGAAACGCTGGATCGGCTCCGAGACGGACCTCGAGCCTCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
CDS CCA 90 bp TGGAGCAAGCAGCCAGGAAGACGGCGCCATCGTCGAACTTCACCTTaGTCTTCTGGCGCTTCACCACCGGAGGCTCGAGGTCCGTCTCGG +
Preference number: 5 (lower is better)
Translates to: WSKQPGRRRHRRTSP*SSGASPPEARGPSR
Trigger: CCGAGACGGACCTCGAGCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGATGGCGCCGTCTTCCTGGCTGCTTGCTCCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
ENST00000550107.5
CDS CCA 90 bp CAGGGGGTGTGTGAATGTTTCTATGAGTGCGGGCCAGAGGAGGGCTaGGAACCCGGAGCCGACGCTCGAGACTTCCAGTATCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: QGVCECFYECGPEEG*EPGADARDFQYPTE
Trigger: CTCTGTGGGATACTGGAAGTCTCGAGCGTCGGCTCCGGGTTCCCAGCCCTCCTCTGGCCCGCACTCATAGAAACATTCACACACCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450142.7
ENST00000547330.5
CDS-3UTR CAA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACAGCGGGGAAGGAAGGTaGTCCTGTCGGGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: PRILPRLPVTANYGPLGYSGEGR*SCRAGG
Trigger: GCCCCCAGCCCGACAGGACAACCTTCCTTCCCCGCT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR CAA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATACCGCGGTGCAGCAGCTaGAGGACCTCGTCCGTGTCG +
Preference number: 5 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIPRCSS*RTSSVS
Trigger: CGACACGGACGAGGTCCTCAAGCTGCTGCACCGCGG...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAAGCGGGGAAGGAAGGTaGTCCTGTCGGGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPSGEGR*SCRAGG
Trigger: GCCCCCAGCCCGACAGGACAACCTTCCTTCCCCGCT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261207.9
ENST00000437004.6
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCACCGCGGTGCAGCAGCTaGAGGACCTCGTCCGTGTCG +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPPRCSS*RTSSVS
Trigger: CGACACGGACGAGGTCCTCAAGCTGCTGCACCGCGG...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS GCA 90 bp GGAGACAGTGCCAGCAGTAGTTGTAGTCAGGGTTGTGGTAGAAGCTaGAGCATTTACAACAGTTGGAGCAACAGGAATGGTCACTGCCGT +
Preference number: 5 (lower is better)
Translates to: GDSASSSCSQGCGRS*SIYNSWSNRNGHCR
Trigger: ACGGCAGTGACCATTCCTGTTGCTCCAACTGTTGTAAATGCTGCAGCTTCTACCACAACCCTGACTACAACTACTGCTGGCACTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000550007.1
ENST00000550107.5
ENST00000553081.5
ENST00000650220.1
CDS GCA 90 bp TCACCCTTACTGGGCACAAGAACAATGCCAGTTTTGCGCAAGCCCTaGCTCCATGATGCAGGATCTACTGATTCCACCACAGGCATGATA +
Preference number: 5 (lower is better)
Translates to: SPLLGTRTMPVLRKP*LHDAGSTDSTTGMI
Trigger: TATCATGCCTGTGGTGGAATCAGTAGATCCTGCATCATGGAGGCAGGGCTTGCGCAAAACTGGCATTGTTCTTGTGCCCAGTAAGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650220.1
CDS-3UTR CAA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGCCCTACATGTGCTCCTaGACCAATCAAAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGPYMCS*TNQKLC
Trigger: GCAGAGTTTTTGATTGGTCAAGGAGCACATGTAGGG...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGTATCTCCTTCACTGTaGACAGCCCCTACATGTGCT +
Preference number: 5 (lower is better)
Translates to: QSPRILPRLPVTANYGPLVSPSL*TAPTCA
Trigger: AGCACATGTAGGGGCTGTCAACAGTGAAGGAGATAC...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACGAAGTAGCTCTTCCATaGCCTCCTCCTCCGCAATAT +
Preference number: 5 (lower is better)
Translates to: PRILPRLPVTANYGPLGYEVALP*PPPPQY
Trigger: ATATTGCGGAGGAGGAGGCAATGGAAGAGCTACTTC...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGCAGCCCACAAACGATTaGAGGTACTGCTTTGTGTGC +
Preference number: 5 (lower is better)
Translates to: QSPRILPRLPVTANYGPLQPTND*RYCFVC
Trigger: GCACACAAAGCAGTACCTCAAATCGTTTGTGGGCTG...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTCCTTTAGCCTCTGGTaGTCTGCTTTTAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGSFSLW*SAFRSG
Trigger: ACCAGACCTAAAAGCAGACAACCAGAGGCTAAAGGA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CAA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCCCGCGGTGCAGCAGCTaGAGGACCTCGTCCGTGTCG +
Preference number: 5 (lower is better)
Translates to: GNNSAFNINSRVNSANDFPRCSS*RTSSVS
Trigger: CGACACGGACGAGGTCCTCAAGCTGCTGCACCGCGG...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGGAGGCATATCTGGCCTaGAACACTTTCCTTATATGC +
Preference number: 5 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGEAYLA*NTFLIC
Trigger: GCATATAAGGAAAGTGTTCAAGGCCAGATATGCCTC...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS CCA 90 bp AGTTGTAGTCAGGGTTGTGGTAGAAGCTGCAGCATTTACAACAGTTaGAGCAACAGGAATGGTCACTGCCGTAGGAACACTGTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SCSQGCGRSCSIYNS*SNRNGHCRRNTVLF
Trigger: GAAAAGGACAGTGTTCCTACGGCAGTGACCATTCCTGTTGCTCCAACTGTTGTAAATGCTGCAGCTTCTACCACAACCCTGACTACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000550007.1
ENST00000550107.5
ENST00000553081.5
ENST00000650220.1
CDS-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATCGTCGAACTTCACCTaGGTCTTCTGGCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: GGRQHSISLIHDNNHRRASSNFT*VFWRFT
Trigger: GGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAGTATCTCCTTCACTGTaGACAGCCCCTACATGTGCT +
Preference number: 5 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAVSPSL*TAPTCA
Trigger: AGCACATGTAGGGGCTGTCAACAGTGAAGGAGATAC...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGCTGTACCTCCAGATTTaGCATGCCGGACATCATTTA +
Preference number: 5 (lower is better)
Translates to: QSPRILPRLPVTANYGPLLYLQI*HAGHHL
Trigger: TAAATGATGTCCGGCATGCAAAATCTGGAGGTACAG...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTACATCAAAGGCTGTTaGGCCCACTTTGTTGACCAT +
Preference number: 5 (lower is better)
Translates to: PRILPRLPVTANYGPLGYYIKGC*AHFVDH
Trigger: ATGGTCAACAAAGTGGGCCAAACAGCCTTTGATGTA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGATCAGCAAATCTTTCTaGTCTCTGGGTGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QSPRILPRLPVTANYGPLISKSF*SLGGLF
Trigger: GAAAAGGCCACCCAGAGACAAGAAAGATTTGCTGAT...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000450142.7
ENST00000634739.1
CDS-3UTR CAA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTCTTTCTTGTCTCTGTaGTATCCTGTACTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: PRILPRLPVTANYGPLGYSFLSL*YPVLES
Trigger: GCTCTCCAGTACAGGATACAACAGAGACAAGAAAGA...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546762.5
CDS GCA 90 bp AGAAGCTGCAGCATTTACAACAGTTGGAGCAACAGGAATGGTCACTaGCGTAGGAACACTGTCCTTTTCTTTCTCAGTACTATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RSCSIYNSWSNRNGH*RRNTVLFFLSTILS
Trigger: GCTGAGGATAGTACTGAGAAAGAAAAGGACAGTGTTCCTACGGCAGTGACCATTCCTGTTGCTCCAACTGTTGTAAATGCTGCAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000550007.1
ENST00000550107.5
ENST00000553081.5
ENST00000650220.1
CDS-3UTR CAA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTCGTCGAACTTCACCTaGGTCTTCTGGCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: GRQHSISLIHDNNHRRASSSNFT*VFWRFT
Trigger: GGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCAGCTACAGGAGCTGCTaGTGTACTAGAAGTGTTGGC +
Preference number: 5 (lower is better)
Translates to: LDKRAFGRISENDSLQGFSYRSC*CTRSVG
Trigger: GCCAACACTTCTAGTACACAAGCAGCTCCTGTAGCT...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATACAGCCCACAAACGATTaGAGGTACTGCTTTGTGTGC +
Preference number: 5 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIQPTND*RYCFVC
Trigger: GCACACAAAGCAGTACCTCAAATCGTTTGTGGGCTG...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGAGATCTTGCTTTTCTTaGGGATTCAGACTCTTCATC +
Preference number: 5 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGRSCFS*GFRLFI
Trigger: GATGAAGAGTCTGAATCCCAAAGAAAAGCAAGATCT...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGTGGTTGAACTTGAAGTaGATACTGGCCTATAACGCT +
Preference number: 5 (lower is better)
Translates to: QSPRILPRLPVTANYGPLWLNLK*ILAYNA
Trigger: AGCGTTATAGGCCAGTATCAACTTCAAGTTCAACCA...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp TATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTAGAATCCTTTAGCCTCTGGTaGTCTGCTTTTAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: YDPERPSKESYRSPADVESFSLW*SAFRSG
Trigger: ACCAGACCTAAAAGCAGACAACCAGAGGCTAAAGGA...TTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CAA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTGTATCTCCTTCACTGTaGACAGCCCCTACATGTGCT +
Preference number: 5 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIVSPSL*TAPTCA
Trigger: AGCACATGTAGGGGCTGTCAACAGTGAAGGAGATAC...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAGAAGTAGCTCTTCCATaGCCTCCTCCTCCGCAATAT +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPEVALP*PPPPQY
Trigger: ATATTGCGGAGGAGGAGGCAATGGAAGAGCTACTTC...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAGAAGTAGCTCTTCCATaGCCTCCTCCTCCGCAATAT +
Preference number: 5 (lower is better)
Translates to: ILDKRAFGRISENDSLQGEVALP*PPPPQY
Trigger: ATATTGCGGAGGAGGAGGCAATGGAAGAGCTACTTC...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAGTTTGGCCCACTTTGTaGACCATCTCCATATCACAC +
Preference number: 5 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIVWPTL*TISISH
Trigger: GTGTGATATGGAGATGGTCAACAAAGTGGGCCAAAC...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGACTATGGAGCAGATTTaGTTTCTTTTGCAACTCTTC +
Preference number: 5 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGTMEQI*FLLQLF
Trigger: GAAGAGTTGCAAAAGAAACAAAATCTGCTCCATAGT...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTCATCAACCTTTTCTaGTTCCAGAGATTCAATACG +
Preference number: 5 (lower is better)
Translates to: VSKDSSQTSSDCQLWSTGFINLF*FQRFNT
Trigger: CGTATTGAATCTCTGGAACAAGAAAAGGTTGATGAA...CCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAAGCTACAGGAGCTGCTaGTGTACTAGAAGTGTTGGC +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPSYRSC*CTRSVG
Trigger: GCCAACACTTCTAGTACACAAGCAGCTCCTGTAGCT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTAGCTACAGGAGCTGCTaGTGTACTAGAAGTGTTGGC +
Preference number: 5 (lower is better)
Translates to: QTSSDCQLWSTGLLICAISYRSC*CTRSVG
Trigger: GCCAACACTTCTAGTACACAAGCAGCTCCTGTAGCT...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCACAGCCCACAAACGATTaGAGGTACTGCTTTGTGTGC +
Preference number: 5 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAQPTND*RYCFVC
Trigger: GCACACAAAGCAGTACCTCAAATCGTTTGTGGGCTG...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATCAGCAAATCTTTCTaGTCTCTGGGTGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAISKSF*SLGGLF
Trigger: GAAAAGGCCACCCAGAGACAAGAAAGATTTGCTGAT...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000450142.7
ENST00000634739.1
CDS-3UTR CAA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAGAGGCATATCTGGCCTaGAACACTTTCCTTATATGC +
Preference number: 5 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAEAYLA*NTFLIC
Trigger: GCATATAAGGAAAGTGTTCAAGGCCAGATATGCCTC...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS TCA 90 bp GTAGCTGTGGTTGGAAACTTTTTAATAGGTGATGTAGGTGTTGCTTaGCCTGATGACACAGTAGGTGTTGTAACAGCTACAGGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VAVVGNFLIGDVGVA*PDDTVGVVTATGAA
Trigger: AGCAGCTCCTGTAGCTGTTACAACACCTACTGTGTCATCAGGTCAAGCAACACCTACATCACCTATTAAAAAGTTTCCAACCACAGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547131.1
ENST00000547330.5
ENST00000550107.5
CDS TCA 90 bp AAGCAGGCTTTTCTGAAGCCCAGCTGCAGAGGTAACTGTTGGTGTTaGTGTGGTGCTTGGAACACTAGAACTAATCAAATCATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: KQAFLKPSCRGNCWC*CGAWNTRTNQIILS
Trigger: AGACAAGATGATTTGATTAGTTCTAGTGTTCCAAGCACCACATCAACACCAACAGTTACCTCTGCAGCTGGGCTTCAGAAAAGCCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547330.5
ENST00000650220.1
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTCCCTACATGTGCTCCTaGACCAATCAAAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVPYMCS*TNQKLC
Trigger: GCAGAGTTTTTGATTGGTCAAGGAGCACATGTAGGG...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCACCCTACATGTGCTCCTaGACCAATCAAAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAPYMCS*TNQKLC
Trigger: GCAGAGTTTTTGATTGGTCAAGGAGCACATGTAGGG...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CAGTCTCCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGTCCATATCACACAGATaGTCCACTAAAATTCGACAT +
Preference number: 5 (lower is better)
Translates to: QSPRILPRLPVTANYGPLSISHR*STKIRH
Trigger: ATGTCGAATTTTAGTGGACAATCTGTGTGATATGGA...CAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAGCTGTTTGGCCCACTTaGTTGACCATCTCCATATCA +
Preference number: 5 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAAVWPT*LTISIS
Trigger: TGATATGGAGATGGTCAACAAAGTGGGCCAAACAGC...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTGCTGTTTGGCCCACTTaGTTGACCATCTCCATATCA +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVAVWPT*LTISIS
Trigger: TGATATGGAGATGGTCAACAAAGTGGGCCAAACAGC...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTGTCCTAACCTCCAAGTaGCAGGAGACTCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVVLTSK*QETHLF
Trigger: GAAAAGATGAGTCTCCTGCAACTTGGAGGTTAGGAC...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAGTCCTAACCTCCAAGTaGCAGGAGACTCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPVLTSK*QETHLF
Trigger: GAAAAGATGAGTCTCCTGCAACTTGGAGGTTAGGAC...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CCAAGGATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACACTAATCAAATCATCTaGTCTTCTACCAAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: PRILPRLPVTANYGPLGYTNQII*SSTKGA
Trigger: TGCTCCTTTGGTAGAAGACAAGATGATTTGATTAGT...GTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATCCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp TATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTGATGTAGAATGGTTGAACTTGAAGTaGATACTGGCCTATAACGCT +
Preference number: 5 (lower is better)
Translates to: YDPERPSKESYRSPADVEWLNLK*ILAYNA
Trigger: AGCGTTATAGGCCAGTATCAACTTCAAGTTCAACCA...TTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CAA 90 bp CTAAGTAACTGTATGATCCAGAGCGACCCAGCAAGGAATCATATCGATCACCAGATGGAGTGGTTGAACTaGAAGTTGATACTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: LSNCMIQSDPARNHIDHQMEWLN*KLILAY
Trigger: ATAGGCCAGTATCAACTTCAAGTTCAACCACTCCAT...CTGGTGATCGATATGATTCCTTGCTGGGTCGCTCTGGATCATACAGTTACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CAA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCATCAGCAAATCTTTCTaGTCTCTGGGTGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LDKRAFGRISENDSLQGFISKSF*SLGGLF
Trigger: GAAAAGGCCACCCAGAGACAAGAAAGATTTGCTGAT...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000450142.7
ENST00000634739.1
CDS-3UTR CAA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTTCCTTTAGCCTCTGGTaGTCTGCTTTTAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: QTSSDCQLWSTGLLICAISFSLW*SAFRSG
Trigger: ACCAGACCTAAAAGCAGACAACCAGAGGCTAAAGGA...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATCCTTTAGCCTCTGGTaGTCTGCTTTTAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: GGRQHSISLIHDNNHRRASFSLW*SAFRSG
Trigger: ACCAGACCTAAAAGCAGACAACCAGAGGCTAAAGGA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAGAGGCATATCTGGCCTaGAACACTTTCCTTATATGC +
Preference number: 5 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIEAYLA*NTFLIC
Trigger: GCATATAAGGAAAGTGTTCAAGGCCAGATATGCCTC...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS TCA 90 bp TGGTCAGATTCCAGGACCTTGATTGAAATATATTCATCAGCAGGTTaGATGACTCTGTATCCATGCAGCCAGACCAGTAAACTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: WSDSRTLIEIYSSAG*MTLYPCSQTSKLAF
Trigger: AAAGGCCAGTTTACTGGTCTGGCTGCATGGATACAGAGTCATTCAACCTGCTGATGAATATATTTCAATCAAGGTCCTGGAATCTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547253.5
CDS-3UTR CAA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCTCGTCGAACTTCACCTaGGTCTTCTGGCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: GNNSAFNINSRVNSANDFSSNFT*VFWRFT
Trigger: GGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGA...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCACTGTACCTCCAGATTTaGCATGCCGGACATCATTTA +
Preference number: 5 (lower is better)
Translates to: GGRQHSISLIHDNNHRRALYLQI*HAGHHL
Trigger: TAAATGATGTCCGGCATGCAAAATCTGGAGGTACAG...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTGTTTGGCCCACTTTGTaGACCATCTCCATATCACAC +
Preference number: 5 (lower is better)
Translates to: GRQHSISLIHDNNHRRASVWPTL*TISISH
Trigger: GTGTGATATGGAGATGGTCAACAAAGTGGGCCAAAC...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTTACATCAAAGGCTGTTaGGCCCACTTTGTTGACCAT +
Preference number: 5 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIYIKGC*AHFVDH
Trigger: ATGGTCAACAAAGTGGGCCAAACAGCCTTTGATGTA...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGTACTAGAAGTGTaGGCATTAGTTACAGAAGCC +
Preference number: 5 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLICVLEV*ALVTEA
Trigger: GGCTTCTGTAACTAATGCCAACACTTCTAGTACACA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTGTCCTAACCTCCAAGTaGCAGGAGACTCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: GRQHSISLIHDNNHRRASVLTSK*QETHLF
Trigger: GAAAAGATGAGTCTCCTGCAACTTGGAGGTTAGGAC...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAAAGAGGATGGAGTGGTaGAACTTGAAGTTGATACTG +
Preference number: 5 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIKRMEW*NLKLIL
Trigger: CAGTATCAACTTCAAGTTCAACCACTCCATCCTCTT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGCCTACAAGACTATTaGGCCTGTTTAGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLICLQDY*ACLVDL
Trigger: CAAGTCAACTAAACAGGCCAAATAGTCTTGTAGGCA...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAAGGTCTGGTAACATTTaGAGCTCTTCTTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: SQTSSDCQLWSTGLLICARSGNI*SSSSIS
Trigger: TGAAATGGAAGAAGAGCTCAAAATGTTACCAGACCT...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CAA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTCCTTTAGCCTCTGGTaGTCTGCTTTTAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: GRQHSISLIHDNNHRRASSFSLW*SAFRSG
Trigger: ACCAGACCTAAAAGCAGACAACCAGAGGCTAAAGGA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTACATCAAAGGCTGTTaGGCCCACTTTGTTGACCAT +
Preference number: 5 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAYIKGC*AHFVDH
Trigger: ATGGTCAACAAAGTGGGCCAAACAGCCTTTGATGTA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATGTGTACTAGAAGTGTaGGCATTAGTTACAGAAGCC +
Preference number: 5 (lower is better)
Translates to: ILDKRAFGRISENDSLQGCVLEV*ALVTEA
Trigger: GGCTTCTGTAACTAATGCCAACACTTCTAGTACACA...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCATCTAGATTGTCTTGCTaGTCTAGATCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SQTSSDCQLWSTGLLICASRLSC*SRSCFS
Trigger: AGAAAAGCAAGATCTAGACAAGCAAGACAATCTAGA...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAAACGACTTCTTCCTATaGTTTTCTCAGCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: SQTSSDCQLWSTGLLICANDFFL*FSQLLE
Trigger: TTCAAGAAGCTGAGAAAACAATAGGAAGAAGTCGTT...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCATGGTTGAACTTGAAGTaGATACTGGCCTATAACGCT +
Preference number: 5 (lower is better)
Translates to: GGRQHSISLIHDNNHRRAWLNLK*ILAYNA
Trigger: AGCGTTATAGGCCAGTATCAACTTCAAGTTCAACCA...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAATGGAGTGGTTGAACTaGAAGTTGATACTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPMEWLN*KLILAY
Trigger: ATAGGCCAGTATCAACTTCAAGTTCAACCACTCCAT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTATGGAGTGGTTGAACTaGAAGTTGATACTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVMEWLN*KLILAY
Trigger: ATAGGCCAGTATCAACTTCAAGTTCAACCACTCCAT...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAATGGAGTGGTTGAACTaGAAGTTGATACTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: ILDKRAFGRISENDSLQGMEWLN*KLILAY
Trigger: ATAGGCCAGTATCAACTTCAAGTTCAACCACTCCAT...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAAAGAGGATGGAGTGGTaGAACTTGAAGTTGATACTG +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPKRMEW*NLKLIL
Trigger: CAGTATCAACTTCAAGTTCAACCACTCCATCCTCTT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTTGCCTACAAGACTATTaGGCCTGTTTAGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVCLQDY*ACLVDL
Trigger: CAAGTCAACTAAACAGGCCAAATAGTCTTGTAGGCA...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GATTCTTCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATAAGGTCTGGTAACATTTaGAGCTCTTCTTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: DSSQTSSDCQLWSTGLLIRSGNI*SSSSIS
Trigger: TGAAATGGAAGAAGAGCTCAAAATGTTACCAGACCT...TATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGAAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CAA 90 bp TCCCAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATCAGCAAATCTTTCTaGTCTCTGTTGTATCCTGTA +
Preference number: 5 (lower is better)
Translates to: SQTSSDCQLWSTGLLICAISKSF*SLLYPV
Trigger: TACAGGATACAACAGAGACAAGAAAGATTTGCTGAT...TGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546762.5
CDS TCA 90 bp TCCGTGAGATTTTCTGCCCATCACTCTCTCTTGCATTCCCAAAAATaGGACGGAGTACCAGCTGTATTTATCATTATACTTCTACATTGC +
Preference number: 5 (lower is better)
Translates to: SVRFSAHHSLLHSQK*DGVPAVFIIILLHC
Trigger: GCAATGTAGAAGTATAATGATAAATACAGCTGGTACTCCGTCTCATTTTTGGGAATGCAAGAGAGAGTGATGGGCAGAAAATCTCACGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548908.3
CDS GCA 90 bp AGTGTTCTTAGCATACGAAAAATCTTACAATGGCCTATAAGGCACTaGATGATCTGGTCTCAGCCTATACAACTGCTGCCTCAAATGAAT +
Preference number: 5 (lower is better)
Translates to: SVLSIRKILQWPIRH*MIWSQPIQLLPQMN
Trigger: ATTCATTTGAGGCAGCAGTTGTATAGGCTGAGACCAGATCATGCAGTGCCTTATAGGCCATTGTAAGATTTTTCGTATGCTAAGAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548908.3
CDS CCA 90 bp AGCATACGAAAAATCTTACAATGGCCTATAAGGCACTGCATGATCTaGTCTCAGCCTATACAACTGCTGCCTCAAATGAATATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SIRKILQWPIRHCMI*SQPIQLLPQMNISS
Trigger: GGAAGAAATATTCATTTGAGGCAGCAGTTGTATAGGCTGAGACCAGATCATGCAGTGCCTTATAGGCCATTGTAAGATTTTTCGTATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548908.3
CDS-3UTR CAA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTGTTTGGCCCACTTTGTaGACCATCTCCATATCACAC +
Preference number: 5 (lower is better)
Translates to: ETKILDKRAFGRISENDSVWPTL*TISISH
Trigger: GTGTGATATGGAGATGGTCAACAAAGTGGGCCAAAC...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCAATTAGTGGAGATTTCTaGTCCCGTTTTTCACTATGG +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPISGDF*SRFSLW
Trigger: CCATAGTGAAAAACGGGACAAGAAATCTCCACTAAT...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTTGTGTACTAGAAGTGTaGGCATTAGTTACAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GRQHSISLIHDNNHRRASCVLEV*ALVTEA
Trigger: GGCTTCTGTAACTAATGCCAACACTTCTAGTACACA...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp CTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATTCACTAATCAAATCATCTaGTCTTCTACCAAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LDKRAFGRISENDSLQGFTNQII*SSTKGA
Trigger: TGCTCCTTTGGTAGAAGACAAGATGATTTGATTAGT...GAATCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTAGATCTTGCTTTTCTTaGGGATTCAGACTCTTCATC +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVRSCFS*GFRLFI
Trigger: GATGAAGAGTCTGAATCCCAAAGAAAAGCAAGATCT...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTAAGAGGATGGAGTGGTaGAACTTGAAGTTGATACTG +
Preference number: 5 (lower is better)
Translates to: GRQHSISLIHDNNHRRASKRMEW*NLKLIL
Trigger: CAGTATCAACTTCAAGTTCAACCACTCCATCCTCTT...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTTGCCTACAAGACTATTaGGCCTGTTTAGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: DCQLWSTGLLICAIPLLACLQDY*ACLVDL
Trigger: CAAGTCAACTAAACAGGCCAAATAGTCTTGTAGGCA...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTAGGTCTGGTAACATTTaGAGCTCTTCTTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIRSGNI*SSSSIS
Trigger: TGAAATGGAAGAAGAGCTCAAAATGTTACCAGACCT...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CAA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTCCTTTAGCCTCTGGTaGTCTGCTTTTAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: ETKILDKRAFGRISENDSSFSLW*SAFRSG
Trigger: ACCAGACCTAAAAGCAGACAACCAGAGGCTAAAGGA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CAA 90 bp CAGACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTTTCTATATCAACCCCTaGCCGATTAACTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: QTSSDCQLWSTGLLICAIFYINP*PINFIL
Trigger: CAAAATGAAGTTAATCGGCAAGGGGTTGATATAGAA...AATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTTTCTATATCAACCCCTaGCCGATTAACTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVFYINP*PINFIL
Trigger: CAAAATGAAGTTAATCGGCAAGGGGTTGATATAGAA...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTTCCATATCACACAGATaGTCCACTAAAATTCGACAT +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVSISHR*STKIRH
Trigger: ATGTCGAATTTTAGTGGACAATCTGTGTGATATGGA...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGATCCATATCACACAGATaGTCCACTAAAATTCGACAT +
Preference number: 5 (lower is better)
Translates to: ILDKRAFGRISENDSLQGSISHR*STKIRH
Trigger: ATGTCGAATTTTAGTGGACAATCTGTGTGATATGGA...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTCTCCAAGGAACTATGGAGCAGATTTaGTTTCTTTTGCAACTCTTC +
Preference number: 5 (lower is better)
Translates to: ILDKRAFGRISENDSLQGTMEQI*FLLQLF
Trigger: GAAGAGTTGCAAAAGAAACAAAATCTGCTCCATAGT...TCCTTGGAGACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTATTAGTGGAGATTTCTaGTCCCGTTTTTCACTATGG +
Preference number: 5 (lower is better)
Translates to: DCQLWSTGLLICAIPLLAISGDF*SRFSLW
Trigger: CCATAGTGAAAAACGGGACAAGAAATCTCCACTAAT...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GTCGATGCCTCTTCACATGGCAATAACAGTGCATTTAACATTAACTCACGGGTTTTCATCAACCTTTTCTaGTTCCAGAGATTCAATACG +
Preference number: 5 (lower is better)
Translates to: VDASSHGNNSAFNINSRVFINLF*FQRFNT
Trigger: CGTATTGAATCTCTGGAACAAGAAAAGGTTGATGAA...AACCCGTGAGTTAATGTTAAATGCACTGTTATTGCCATGTGAAGAGGCATCGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTAGATCTTGCTTTTCTTaGGGATTCAGACTCTTCATC +
Preference number: 5 (lower is better)
Translates to: GRQHSISLIHDNNHRRASRSCFS*GFRLFI
Trigger: GATGAAGAGTCTGAATCCCAAAGAAAAGCAAGATCT...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp ACTTCCAGTGACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATCTAGATTGTCTTGCTaGTCTAGATCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TSSDCQLWSTGLLICAIPSRLSC*SRSCFS
Trigger: AGAAAAGCAAGATCTAGACAAGCAAGACAATCTAGA...TGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTCACTGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGTGGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAACGACTTCTTCCTATaGTTTTCTCAGCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: GGRQHSISLIHDNNHRRANDFFL*FSQLLE
Trigger: TTCAAGAAGCTGAGAAAACAATAGGAAGAAGTCGTT...TGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS GCA 90 bp CTTGTTTCAAAGAGTGACAGGCAAAGCCAACACACAACACATTATTaGAGTGTACTGTTTTATTCTCCCTTAAATGATAAGCATTCTGGG +
Preference number: 5 (lower is better)
Translates to: LVSKSDRQSQHTTHY*SVLFYSPLNDKHSG
Trigger: CCCAGAATGCTTATCATTTAAGGGAGAATAAAACAGTACACTGCAATAATGTGTTGTGTGTTGGCTTTGCCTGTCACTCTTTGAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548908.3
ENST00000552892.1
CDS-3UTR CAA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCCTGTACCTCCAGATTTaGCATGCCGGACATCATTTA +
Preference number: 5 (lower is better)
Translates to: GNNSAFNINSRVNSANDFLYLQI*HAGHHL
Trigger: TAAATGATGTCCGGCATGCAAAATCTGGAGGTACAG...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GACTGCCAATTATGGTCCACTGGGTTACTAATATGTGCAATTCCATTACTTGCTACTAATCAAATCATCTaGTCTTCTACCAAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: DCQLWSTGLLICAIPLLATNQII*SSTKGA
Trigger: TGCTCCTTTGGTAGAAGACAAGATGATTTGATTAGT...AGCAAGTAATGGAATTGCACATATTAGTAACCCAGTGGACCATAATTGGCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGGAGACAACACAGCATTAGCCTAATACATGACAATAATCACAGAAGAGCAAGTAACGACTTCTTCCTATaGTTTTCTCAGCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: GRQHSISLIHDNNHRRASNDFFL*FSQLLE
Trigger: TTCAAGAAGCTGAGAAAACAATAGGAAGAAGTCGTT...ACTTGCTCTTCTGTGATTATTGTCATGTATTAGGCTAATGCTGTGTTGTCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTGGTTGAACTTGAAGTaGATACTGGCCTATAACGCT +
Preference number: 5 (lower is better)
Translates to: ETKILDKRAFGRISENDSWLNLK*ILAYNA
Trigger: AGCGTTATAGGCCAGTATCAACTTCAAGTTCAACCA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTATGGAGTGGTTGAACTaGAAGTTGATACTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: ETKILDKRAFGRISENDSMEWLN*KLILAY
Trigger: ATAGGCCAGTATCAACTTCAAGTTCAACCACTCCAT...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTGCCTACAAGACTATTaGGCCTGTTTAGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: ETKILDKRAFGRISENDSCLQDY*ACLVDL
Trigger: CAAGTCAACTAAACAGGCCAAATAGTCTTGTAGGCA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
CDS-3UTR CAA 90 bp TGGGTGGCCTTTTCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCAATCAGCAAATCTTTCTaGTCTCTGGGTGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: WVAFSNCNLRSVSSIFVSISKSF*SLGGLF
Trigger: GAAAAGGCCACCCAGAGACAAGAAAGATTTGCTGAT...TGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGAAAAGGCCACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CAA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCAAGAGGATGGAGTGGTaGAACTTGAAGTTGATACTG +
Preference number: 5 (lower is better)
Translates to: GNNSAFNINSRVNSANDFKRMEW*NLKLIL
Trigger: CAGTATCAACTTCAAGTTCAACCACTCCATCCTCTT...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp TCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCATGTAGCTGTGCCAAGAGGATGGAGTGGTaGAACTTGAAGTTGATACTG +
Preference number: 5 (lower is better)
Translates to: SNCNLRSVSSIFVSCSCAKRMEW*NLKLIL
Trigger: CAGTATCAACTTCAAGTTCAACCACTCCATCCTCTT...GGCACAGCTACATGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CAA 90 bp TCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCATGTAGCTGTGCCTGCCTACAAGACTATTaGGCCTGTTTAGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: SNCNLRSVSSIFVSCSCACLQDY*ACLVDL
Trigger: CAAGTCAACTAAACAGGCCAAATAGTCTTGTAGGCA...GGCACAGCTACATGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS-3UTR CAA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTAGGTCTGGTAACATTTaGAGCTCTTCTTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: ETKILDKRAFGRISENDSRSGNI*SSSSIS
Trigger: TGAAATGGAAGAAGAGCTCAAAATGTTACCAGACCT...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546762.5
ENST00000634739.1
CDS-3UTR CAA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTTCTATATCAACCCCTaGCCGATTAACTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: ETKILDKRAFGRISENDSFYINP*PINFIL
Trigger: CAAAATGAAGTTAATCGGCAAGGGGTTGATATAGAA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GAAACAAAAATTCTAGATAAGAGGGCATTTGGCAGGATATCCGAAAATGACAGTTTCATCAACCTTTTCTaGTTCCAGAGATTCAATACG +
Preference number: 5 (lower is better)
Translates to: ETKILDKRAFGRISENDSFINLF*FQRFNT
Trigger: CGTATTGAATCTCTGGAACAAGAAAAGGTTGATGAA...ACTGTCATTTTCGGATATCCTGCCAAATGCCCTCTTATCTAGAATTTTTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp TGGGTGGCCTTTTCCAACTGTAATTTAAGATCTGTTAGTTCCATATTTGTATCAAGGTCTGGTAACATTTaGAGCTCTTCTTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: WVAFSNCNLRSVSSIFVSRSGNI*SSSSIS
Trigger: TGAAATGGAAGAAGAGCTCAAAATGTTACCAGACCT...TGATACAAATATGGAACTAACAGATCTTAAATTACAGTTGGAAAAGGCCACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS TCA 90 bp GGTATTTACCTGAGTTTCTTTCTTATTGGATCCCTCTTCTGTGTCTaGTTGTTGTTCTTGTTCATTTTCATCACTATCTTGTGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GIYLSFFLIGSLFCV*LLFLFIFITILCPK
Trigger: TTTTGGACACAAGATAGTGATGAAAATGAACAAGAACAACAATCAGACACAGAAGAGGGATCCAATAAGAAAGAAACTCAGGTAAATACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551781.2
CDS-3UTR CAA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCACTATGGAGCAGATTTaGTTTCTTTTGCAACTCTTC +
Preference number: 5 (lower is better)
Translates to: GNNSAFNINSRVNSANDFTMEQI*FLLQLF
Trigger: GAAGAGTTGCAAAAGAAACAAAATCTGCTCCATAGT...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS-3UTR CAA 90 bp GGCAATAACAGTGCATTTAACATTAACTCACGGGTTAATTCTGCAAATGATTTCTCTAGATTGTCTTGCTaGTCTAGATCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: GNNSAFNINSRVNSANDFSRLSC*SRSCFS
Trigger: AGAAAAGCAAGATCTAGACAAGCAAGACAATCTAGA...GAAATCATTTGCAGAATTAACCCGTGAGTTAATGTTAAATGCACTGTTATTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
CDS CAA 72 bp GCAGCCAGGAAGACGGCGCCATCGTCGAACTTCACCTaGGTCTTCTGGCGCTTCACCACCGGAGGCTCGAGG +
Preference number: 6 (lower is better)
Translates to: AARKTAPSSNFT*VFWRFTTGGSR
Trigger: CCTCGAGCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGATGGCGCCGTCTTCCTGGCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
ENST00000550107.5
CDS CAA 90 bp CTGGAGCAAGCAGCCAGGAAGACGGCGCCATCGTCGAACTTCACCTaGGTCTTCTGGCGCTTCACCACCGGAGGCTCGAGGTCCGTCTCG +
Preference number: 6 (lower is better)
Translates to: LEQAARKTAPSSNFT*VFWRFTTGGSRSVS
Trigger: CGAGACGGACCTCGAGCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGATGGCGCCGTCTTCCTGGCTGCTTGCTCCAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
ENST00000550107.5
CDS GCA 72 bp GAGCCGATCCAGCGTTTCAGCTGCTCGTTCCGCTTCTaGTTCGCGTCCGCCATCTTCATCCCCTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: EPIQRFSCSFRF*FASAIFIPSPA
Trigger: GGCAGGAGAGGGGATGAAGATGGCGGACGCGAAGCAGAAGCGGAACGAGCAGCTGAAACGCTGGATCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
CDS GCA 72 bp TCGAGGTCCGTCTCGGAGCCGATCCAGCGTTTCAGCTaGTCGTTCCGCTTCTGCTTCGCGTCCGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: SRSVSEPIQRFS*SFRFCFASAIF
Trigger: GAAGATGGCGGACGCGAAGCAGAAGCGGAACGAGCAGCTGAAACGCTGGATCGGCTCCGAGACGGACCTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
ENST00000550107.5
CDS CCA 72 bp AAGACGGCGCCATCGTCGAACTTCACCTTGGTCTTCTaGCGCTTCACCACCGGAGGCTCGAGGTCCGTCTCG +
Preference number: 6 (lower is better)
Translates to: KTAPSSNFTLVF*RFTTGGSRSVS
Trigger: CGAGACGGACCTCGAGCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGATGGCGCCGTCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
ENST00000550107.5
CDS CCA 72 bp CAGCCAGGAAGACGGCGCCATCGTCGAACTTCACCTTaGTCTTCTGGCGCTTCACCACCGGAGGCTCGAGGT +
Preference number: 6 (lower is better)
Translates to: QPGRRRHRRTSP*SSGASPPEARG
Trigger: ACCTCGAGCCTCCGGTGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGATGGCGCCGTCTTCCTGGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000547330.5
ENST00000550107.5
CDS GCA 72 bp CTGGGCACAAGAACAATGCCAGTTTTGCGCAAGCCCTaGCTCCATGATGCAGGATCTACTGATTCCACCACA +
Preference number: 6 (lower is better)
Translates to: LGTRTMPVLRKP*LHDAGSTDSTT
Trigger: TGTGGTGGAATCAGTAGATCCTGCATCATGGAGGCAGGGCTTGCGCAAAACTGGCATTGTTCTTGTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650220.1
CDS GCA 72 bp TTTCACCCTTACTGGGCACAAGAACAATGCCAGTTTTaGGCAAGCCCTGCCTCCATGATGCAGGATCTACTG +
Preference number: 6 (lower is better)
Translates to: FHPYWAQEQCQF*ASPASMMQDLL
Trigger: CAGTAGATCCTGCATCATGGAGGCAGGGCTTGCGCAAAACTGGCATTGTTCTTGTGCCCAGTAAGGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650220.1
CDS CAA 72 bp TTTTCACCCTTACTGGGCACAAGAACAATGCCAGTTTaGCGCAAGCCCTGCCTCCATGATGCAGGATCTACT +
Preference number: 6 (lower is better)
Translates to: FSPLLGTRTMPV*RKPCLHDAGST
Trigger: AGTAGATCCTGCATCATGGAGGCAGGGCTTGCGCAAAACTGGCATTGTTCTTGTGCCCAGTAAGGGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650220.1
CDS TCA 72 bp TGCACAGCAACTGCAGCTAGGGCTAAGGAGTCACTGTaGTCTTTATTTGGAGTCCGTGAGATTTTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: CTATAARAKESL*SLFGVREIFCP
Trigger: TGGGCAGAAAATCTCACGGACTCCAAATAAAGATCACAGTGACTCCTTAGCCCTAGCTGCAGTTGCTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548908.3
ENST00000550351.5
CDS CAA 72 bp CTGCAGCTAGGGCTAAGGAGTCACTGTGATCTTTATTaGGAGTCCGTGAGATTTTCTGCCCATCACTCTCTC +
Preference number: 6 (lower is better)
Translates to: LQLGLRSHCDLY*ESVRFSAHHSL
Trigger: GAGAGAGTGATGGGCAGAAAATCTCACGGACTCCAAATAAAGATCACAGTGACTCCTTAGCCCTAGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548908.3
ENST00000550351.5
CDS CAA 90 bp AACATAGATTTTTCACCCTTACTGGGCACAAGAACAATGCCAGTTTaGCGCAAGCCCTGCCTCCATGATGCAGGATCTACTGATTCCACC +
Preference number: 6 (lower is better)
Translates to: NIDFSPLLGTRTMPV*RKPCLHDAGSTDST
Trigger: GGTGGAATCAGTAGATCCTGCATCATGGAGGCAGGGCTTGCGCAAAACTGGCATTGTTCTTGTGCCCAGTAAGGGTGAAAAATCTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650220.1
CDS GCA 72 bp AACTTCCGTATAGCCTTTAGCAGCTGCAACGTGAAGTaGTGTACCTCCAGATTTTGCATGCCGGACATCATT +
Preference number: 6 (lower is better)
Translates to: NFRIAFSSCNVK*CTSRFCMPDII
Trigger: AATGATGTCCGGCATGCAAAATCTGGAGGTACAGCACTTCACGTTGCAGCTGCTAAAGGCTATACGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547330.5
ENST00000548318.1
ENST00000550107.5
ENST00000550510.5
ENST00000551191.1
CDS GCA 72 bp TTATGCTCTGCAGACTTCGGGTTCAGTTCCCACCTCTaGCTGTTGACACTCTGCAATATCAAGATATCCACA +
Preference number: 6 (lower is better)
Translates to: LCSADFGFSSHL*LLTLCNIKIST
Trigger: TGTGGATATCTTGATATTGCAGAGTGTCAACAGGCAGAGGTGGGAACTGAACCCGAAGTCTGCAGAGCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548318.1
CDS GCA 72 bp AAGATTCAGTTATCTGATAAAGAGGGACCACATACCTaGACAGCAACTGCAGCTAGGGCTAAGGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: KIQLSDKEGPHT*TATAARAKESL
Trigger: CAGTGACTCCTTAGCCCTAGCTGCAGTTGCTGTGCAGGTATGTGGTCCCTCTTTATCAGATAACTGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550351.5
CDS TCA 72 bp CCTCCGCAATATCTAAAGGTGTATCTCCTTCACTGTTaGCAGCCCCTACATGTGCTCCTTGACCAATCAAAA +
Preference number: 6 (lower is better)
Translates to: PPQYLKVYLLHC*QPLHVLLDQSK
Trigger: TTTTGATTGGTCAAGGAGCACATGTAGGGGCTGTCAACAGTGAAGGAGATACACCTTTAGATATTGCGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547330.5
ENST00000548318.1
ENST00000550107.5
ENST00000550510.5
CDS CCA 72 bp CTTCCCAGTGTTCTTAGCATACGAAAAATCTTACAATaGCCTATAAGGCACTGCATGATCTGGTCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: LPSVLSIRKILQ*PIRHCMIWSQP
Trigger: AGGCTGAGACCAGATCATGCAGTGCCTTATAGGCCATTGTAAGATTTTTCGTATGCTAAGAACACTGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548908.3
CDS CAA 72 bp GTAACAGCTACAGGAGCTGCTTGTGTACTAGAAGTGTaGGCATTAGTTACAGAAGCCAGGGGTTTTGTCTTA +
Preference number: 6 (lower is better)
Translates to: VTATGAACVLEV*ALVTEARGFVL
Trigger: TAAGACAAAACCCCTGGCTTCTGTAACTAATGCCAACACTTCTAGTACACAAGCAGCTCCTGTAGCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547131.1
ENST00000547330.5
ENST00000550107.5
ENST00000650220.1
CDS TCA 72 bp AGAGCGACCCAGCAAGGAATCATATCGATCACCAGCTaGTGTAGAACTGGTTTCATATCTAGAAATGGAATC +
Preference number: 6 (lower is better)
Translates to: RATQQGIISITS*CRTGFISRNGI
Trigger: GATTCCATTTCTAGATATGAAACCAGTTCTACATCAGCTGGTGATCGATATGATTCCTTGCTGGGTCGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000546762.5
ENST00000548908.3
ENST00000550107.5
ENST00000550299.5
CDS GCA 72 bp CTGGTTAGGTCATACCGCCCAGAAGATACTGACTCTTaGCGGTCACCTTTCAGATACAAACCATTTAAATTT +
Preference number: 6 (lower is better)
Translates to: LVRSYRPEDTDS*RSPFRYKPFKF
Trigger: AAATTTAAATGGTTTGTATCTGAAAGGTGACCGGCAAGAGTCAGTATCTTCTGGGCGGTATGACCTAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552892.1
CDS CAA 72 bp TGGCCCACTTTGTTGACCATCTCCATATCACACAGATaGTCCACTAAAATTCGACATGCTTCTTCTTTACCC +
Preference number: 6 (lower is better)
Translates to: WPTLLTISISHR*STKIRHASSLP
Trigger: GGGTAAAGAAGAAGCATGTCGAATTTTAGTGGACAATCTGTGTGATATGGAGATGGTCAACAAAGTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547330.5
ENST00000550107.5
CDS TCA 72 bp TCCAGGACCTTGATTGAAATATATTCATCAGCAGGTTaGATGACTCTGTATCCATGCAGCCAGACCAGTAAA +
Preference number: 6 (lower is better)
Translates to: SRTLIEIYSSAG*MTLYPCSQTSK
Trigger: TTTACTGGTCTGGCTGCATGGATACAGAGTCATTCAACCTGCTGATGAATATATTTCAATCAAGGTCCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547253.5
CDS TCA 72 bp ATTACTGGTCTTACAGGGCTAGAAATGGAATCCGTCTaGGTTTCTTTCTTATTGGATCCCTCTTCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: ITGLTGLEMESV*VSFLLDPSSVS
Trigger: AGACACAGAAGAGGGATCCAATAAGAAAGAAACTCAGACGGATTCCATTTCTAGCCCTGTAAGACCAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550903.5
CDS GCA 72 bp ATCTCTAAGCATGATCCGTTCTTCTTCCTTTCGAGCTaGTTCTATATCAACCCCTTGCCGATTAACTTCATT +
Preference number: 6 (lower is better)
Translates to: ISKHDPFFFLSS*FYINPLPINFI
Trigger: AATGAAGTTAATCGGCAAGGGGTTGATATAGAAGCAGCTCGAAAGGAAGAAGAACGGATCATGCTTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547330.5
ENST00000548318.1
ENST00000550107.5
ENST00000550510.5
CDS CAA 72 bp CCTACCACTTTGTTGACCATCTCCATATCACACAGATaGTCCACTAAAATTCGACATGCTTCTTCTTTACCC +
Preference number: 6 (lower is better)
Translates to: PTTLLTISISHR*STKIRHASSLP
Trigger: GGGTAAAGAAGAAGCATGTCGAATTTTAGTGGACAATCTGTGTGATATGGAGATGGTCAACAAAGTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551191.1
CDS CAA 72 bp TGGAGCACTTTGTTGACCATCTCCATATCACACAGATaGTCCACTAAAATTCGACATGCTTCTTCTTTACCC +
Preference number: 6 (lower is better)
Translates to: WSTLLTISISHR*STKIRHASSLP
Trigger: GGGTAAAGAAGAAGCATGTCGAATTTTAGTGGACAATCTGTGTGATATGGAGATGGTCAACAAAGTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550510.5
CDS TCA 72 bp GTTGGAAACTTTTTAATAGGTGATGTAGGTGTTGCTTaGCCTGATGACACAGTAGGTGTTGTAACAGCTACA +
Preference number: 6 (lower is better)
Translates to: VGNFLIGDVGVA*PDDTVGVVTAT
Trigger: TGTAGCTGTTACAACACCTACTGTGTCATCAGGTCAAGCAACACCTACATCACCTATTAAAAAGTTTCCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547131.1
ENST00000547330.5
ENST00000550107.5
CDS TCA 72 bp TGCCCGTTAACTATTAGTAATCCTTCCGTTTTTGGCTaGAACCACACTTCCTTTGGAAATCAATCCACTTTC +
Preference number: 6 (lower is better)
Translates to: CPLTISNPSVFG*NHTSFGNQSTF
Trigger: GAAAGTGGATTGATTTCCAAAGGAAGTGTGGTTTCAGCCAAAAACGGAAGGATTACTAATAGTTAACGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548908.3
CDS TCA 72 bp TTATCTGCATTTGACAAGCAGAAAAAGGAGGTTAGGTaGGCTTGTCAGAGTATGAATGTGTCTGCATCATGT +
Preference number: 6 (lower is better)
Translates to: LSAFDKQKKEVR*ACQSMNVSASC
Trigger: ACATGATGCAGACACATTCATACTCTGACAAGCTCACCTAACCTCCTTTTTCTGCTTGTCAAATGCAGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552892.1
CDS TCA 72 bp GAAGTTATGCCTACAAGACTATTTGGCCTGTTTAGTTaGCTTGAAGCATACAGTGAACTGCTCATAGTAGAA +
Preference number: 6 (lower is better)
Translates to: EVMPTRLFGLFS*LEAYSELLIVE
Trigger: TTCTACTATGAGCAGTTCACTGTATGCTTCAAGTCAACTAAACAGGCCAAATAGTCTTGTAGGCATAACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000546762.5
ENST00000550107.5
ENST00000550903.5
ENST00000551781.2
CDS TCA 72 bp TTTTCTGCCCATCACTCTCTCTTGCATTCCCAAAAATaGGACGGAGTACCAGCTGTATTTATCATTATACTT +
Preference number: 6 (lower is better)
Translates to: FSAHHSLLHSQK*DGVPAVFIIIL
Trigger: AAGTATAATGATAAATACAGCTGGTACTCCGTCTCATTTTTGGGAATGCAAGAGAGAGTGATGGGCAGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548908.3
ENST00000550351.5
CDS GCA 72 bp TTTTCGTCTTTCTTAACACTCCTTCTTCCTTATCCCTaGTTTACTACTTCCACCATAATTCTGGCTATGATC +
Preference number: 6 (lower is better)
Translates to: FSSFLTLLLPYP*FTTSTIILAMI
Trigger: GATCATAGCCAGAATTATGGTGGAAGTAGTAAAGCAGGGATAAGGAAGAAGGAGTGTTAAGAAAGACGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548908.3
CDS CAA 72 bp TTTCTTTCTCAGTACTATCCTCAGCCCACAAACGATTaGAGGTACTATAGCATCATAAGCAGCAACACAAAA +
Preference number: 6 (lower is better)
Translates to: FLSQYYPQPTND*RYYSIISSNTK
Trigger: TTTTGTGTTGCTGCTTATGATGCTATAGTACCTCAAATCGTTTGTGGGCTGAGGATAGTACTGAGAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550007.1
CDS TCA 72 bp AAATCATACTTTTTAATAGGTGATGTAGGTGTTGCTTaGCCTGATGACACAGTAGGTGTTGTAACAGCTACA +
Preference number: 6 (lower is better)
Translates to: KSYFLIGDVGVA*PDDTVGVVTAT
Trigger: TGTAGCTGTTACAACACCTACTGTGTCATCAGGTCAAGCAACACCTACATCACCTATTAAAAAGTATGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650220.1
CDS CAA 72 bp TGTGGTGCTTGGAACACTAGAACTAATCAAATCATCTaGTCTTCTACCAAAGGAGCAACTTTTATGATACGT +
Preference number: 6 (lower is better)
Translates to: CGAWNTRTNQII*SSTKGATFMIR
Trigger: ACGTATCATAAAAGTTGCTCCTTTGGTAGAAGACAAGATGATTTGATTAGTTCTAGTGTTCCAAGCACCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547330.5
ENST00000650220.1
CDS CAA 90 bp TGCAGTGAATGTAATAGAAAAGCAACTGCAGCGTTTATTTTAAACTaGTTTCAAAGAGTGACAGGCAAAGCCAACACACAACACATTATT +
Preference number: 6 (lower is better)
Translates to: CSECNRKATAAFILN*FQRVTGKANTQHII
Trigger: AATAATGTGTTGTGTGTTGGCTTTGCCTGTCACTCTTTGAAACAAGTTTAAAATAAACGCTGCAGTTGCTTTTCTATTACATTCACTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548908.3
ENST00000552892.1
CDS CAA 72 bp TCCATATTTGCTGTTGATTCAATTAGTGGAGATTTCTaGTCCCGTTTTTCACTATGGAGCAGATTTTGTTTC +
Preference number: 6 (lower is better)
Translates to: SIFAVDSISGDF*SRFSLWSRFCF
Trigger: GAAACAAAATCTGCTCCATAGTGAAAAACGGGACAAGAAATCTCCACTAATTGAATCAACAGCAAATATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547330.5
ENST00000550107.5
CDS CAA 72 bp TTGAACGCTCCTTTCCAGCTCAATCATAGCAATGACTaGAGATACTTAAATGTAAAATCATCTTGGATGACT +
Preference number: 6 (lower is better)
Translates to: LNAPFQLNHSND*RYLNVKSSWMT
Trigger: AGTCATCCAAGATGATTTTACATTTAAGTATCTCAAGTCATTGCTATGATTGAGCTGGAAAGGAGCGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548908.3
CDS CAA 72 bp GATCATCTTCCCATTTTCTCCTTGTATATGAACTACTaGTTCGCAAACTTGAAGAATCTCTGTTTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: DHLPIFSLYMNY*FANLKNLCFLS
Trigger: AGAAAGAAAACAGAGATTCTTCAAGTTTGCGAACAAGTAGTTCATATACAAGGAGAAAATGGGAAGATGATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261207.9
ENST00000437004.6
ENST00000450142.7
ENST00000546369.5
ENST00000547131.1
ENST00000547330.5
ENST00000550001.1
ENST00000550107.5
ENST00000553081.5
ENST00000650220.1