RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPOX (Homo sapiens)

Ensembl gene IDs: ENSG00000143224

Ensembl transcript IDs: ENST00000352210.9, ENST00000367999.9, ENST00000462866.5, ENST00000462977.1, ENST00000466452.1, ENST00000468968.6, ENST00000470607.5, ENST00000479246.5, ENST00000490768.1, ENST00000494216.1, ENST00000495483.5, ENST00000497522.5, ENST00000535223.5, ENST00000537523.5, ENST00000537829.1, ENST00000539753.5, ENST00000541818.1, ENST00000544598.5, ENST00000650741.1, ENST00000651150.1, ENST00000652100.1, ENST00000652103.1, ENST00000652182.1, ENST00000652297.1, ENST00000652473.1, ENST00000652729.1

Found 461 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCTCAGGCGCTGCTCCCTCACAAGCCCCCGGCCACGCGGTGTCTaGGACCGGGTGCCTAGTCAGCCCGGGTGGCTCCGCCCCGAGGCC +
Preference number: 1 (lower is better)
Translates to: RLRRCSLTSPRPRGV*DRVPSQPGWLRPEA
Trigger: GGCCTCGGGGCGGAGCCACCCGGGCTGACTAGGCACCCGGTCCCAGACACCGCGTGGCCGGGGGCTTGTGAGGGAGCAGCGCCTGAGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 90 bp CAGGGGGTCGCCTACAACGCGTTCCAGGTGGGCAGGCTCAGGCGCTaGTCCCTCACAAGCCCCCGGCCACGCGGTGTCTGGGACCGGGTG +
Preference number: 1 (lower is better)
Translates to: QGVAYNAFQVGRLRR*SLTSPRPRGVWDRV
Trigger: CACCCGGTCCCAGACACCGCGTGGCCGGGGGCTTGTGAGGGAGCAGCGCCTGAGCCTGCCCACCTGGAACGCGTTGTAGGCGACCCCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR TCA 90 bp CACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTGGGGTCCGCCCTGCCCCCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: HEVTTGSSAQPRPGE*VLSLAVGSALPPAA
Trigger: TGCTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR CCA 90 bp AGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTaGCGAATGAGTGCTGAGTCTGGCTGTGGGGTCCGCCCTGCCCCC +
Preference number: 1 (lower is better)
Translates to: RPPRSDHWLQRSAKA*RMSAESGCGVRPAP
Trigger: GGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR CCA 90 bp TGGGTAACGCCTGGAGACGAGCCTGAGCAGGGACGGGGTCCTAGGTaGAAGTATGGACGGGGGCCGGGCGGGCTCACGTTGCTAGTAGGT +
Preference number: 1 (lower is better)
Translates to: WVTPGDEPEQGRGPR*KYGRGPGGLTLLVG
Trigger: ACCTACTAGCAACGTGAGCCCGCCCGGCCCCCGTCCATACTTCCACCTAGGACCCCGTCCCTGCTCAGGCTCGTCTCCAGGCGTTACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 90 bp GGCGGTGACGACAGGCAGCAAAAGACCAGGTATGTGCGCTGGGAATaGGTCGACACGGAGGCCTGGGATAAAGGTTTGGGCATTCGAGAG +
Preference number: 1 (lower is better)
Translates to: GGDDRQQKTRYVRWE*VDTEAWDKGLGIRE
Trigger: CTCTCGAATGCCCAAACCTTTATCCCAGGCCTCCGTGTCGACGCATTCCCAGCGCACATACCTGGTCTTTTGCTGCCTGTCGTCACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 90 bp GAGACTGGGAAAGCAGGACCTGATGCTGAGCTCACGGCTGTTGCCTaGAAACACTCCACGGCAGAGACTGTCCATGGCTCAGGTCCAAGG +
Preference number: 1 (lower is better)
Translates to: ETGKAGPDAELTAVA*KHSTAETVHGSGPR
Trigger: CCTTGGACCTGAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651150.1
3UTR CCA 90 bp CCGGGCGGGCTCACGTTGCTAGTAGGTAGGGCAAAAGCAAGAGACTaGGATAGGATGGGCGTGCTCCGAAAGAGCTGGGTTTTAACCCCC +
Preference number: 1 (lower is better)
Translates to: PGGLTLLVGRAKARD*DRMGVLRKSWVLTP
Trigger: GGGGGTTAAAACCCAGCTCTTTCGGAGCACGCCCATCCTATCCCAGTCTCTTGCTTTTGCCCTACCTACTAGCAACGTGAGCCCGCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 90 bp TGGGGTGGCGGTGACGACAGGCAGCAAAAGACCAGGTATGTGCGCTaGGAATGCGTCGACACGGAGGCCTGGGATAAAGGTTTGGGCATT +
Preference number: 1 (lower is better)
Translates to: WGGGDDRQQKTRYVR*ECVDTEAWDKGLGI
Trigger: AATGCCCAAACCTTTATCCCAGGCCTCCGTGTCGACGCATTCCCAGCGCACATACCTGGTCTTTTGCTGCCTGTCGTCACCGCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR TCA 90 bp AGGTGGTCACGGTCCCTGCACCTGAGGAGTTGGCACCCAGGCACATaGAGAATAGAAGGAGCCTGTTTCCTACTTCGCCCTGGGTACTCC +
Preference number: 1 (lower is better)
Translates to: RWSRSLHLRSWHPGT*RIEGACFLLRPGYS
Trigger: GGAGTACCCAGGGCGAAGTAGGAAACAGGCTCCTTCTATTCTTCATGTGCCTGGGTGCCAACTCCTCAGGTGCAGGGACCGTGACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 90 bp GGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGC +
Preference number: 1 (lower is better)
Translates to: GSSSLSTEAGMALIT*SASRLLSLRDTFQR
Trigger: GCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR CCA 90 bp CCCAGGCACATGAAGAATAGAAGGAGCCTGTTTCCTACTTCGCCCTaGGTACTCCTTAGGCCACTCCACGGTCCTGTCATGACTCTGTCG +
Preference number: 1 (lower is better)
Translates to: PRHMKNRRSLFPTSP*VLLRPLHGPVMTLS
Trigger: CGACAGAGTCATGACAGGACCGTGGAGTGGCCTAAGGAGTACCCAGGGCGAAGTAGGAAACAGGCTCCTTCTATTCTTCATGTGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 90 bp AGTTGGGGATCAGCTGTTAGGTTCTGTGCCCAGGACACTGACTGCTaGCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTC +
Preference number: 1 (lower is better)
Translates to: SWGSAVRFCAQDTDC*LAPTLYTVINSNSL
Trigger: GAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGCACAGAACCTAACAGCTGATCCCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537829.1
3UTR GCA 90 bp GAGAGTTGGGGATCAGCTGTTAGGTTCTGTGCCCAGGACACTGACTaGTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCC +
Preference number: 1 (lower is better)
Translates to: ESWGSAVRFCAQDTD*CLAPTLYTVINSNS
Trigger: GGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGCACAGAACCTAACAGCTGATCCCCAACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537829.1
3UTR CCA 90 bp CAAAAGACCAGGTATGTGCGCTGGGAATGCGTCGACACGGAGGCCTaGGATAAAGGTTTGGGCATTCGAGAGAGTGAGAAGTTTTGGGTA +
Preference number: 1 (lower is better)
Translates to: QKTRYVRWECVDTEA*DKGLGIRESEKFWV
Trigger: TACCCAAAACTTCTCACTCTCTCGAATGCCCAAACCTTTATCCCAGGCCTCCGTGTCGACGCATTCCCAGCGCACATACCTGGTCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 90 bp CGCTTTTTATTTCCAGGCCTGCGGGATACAACGGGAATACAAAAATaGGCTAGAGCGGTCCGCAACGCTGTAGCCTGCGTAAGGAACAAT +
Preference number: 1 (lower is better)
Translates to: RFLFPGLRDTTGIQK*ARAVRNAVACVRNN
Trigger: ATTGTTCCTTACGCAGGCTACAGCGTTGCGGACCGCTCTAGCGCATTTTTGTATTCCCGTTGTATCCCGCAGGCCTGGAAATAAAAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR TCA 90 bp GCTGCTCCCTCACAAGCCCCCGGCCACGCGGTGTCTGGGACCGGGTGCCTAGTCCTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: AAPSQAPGHAVSGTGCLVLLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...GACTAGGCACCCGGTCCCAGACACCGCGTGGCCGGGGGCTTGTGAGGGAGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR CCA 90 bp AGCCCCCAGGTGGTCACGGTCCCTGCACCTGAGGAGTTGGCACCCAGGCACATGTTCTGGGCAGCTGGGTaGTCTCCCCGGACAGGCAGC +
Preference number: 2 (lower is better)
Translates to: SPQVVTVPAPEELAPRHMFWAAG*SPRTGS
Trigger: GCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAA...CATGTGCCTGGGTGCCAACTCCTCAGGTGCAGGGACCGTGACCACCTGGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR GCA 90 bp AGAGGACGCCACCCCCACCCTACTCTCCGCCGAGCTCCGGGGCTGTTCGCTTACCTCACGGCTGTTGCCTaGAAACACTCCACGGCAGAG +
Preference number: 2 (lower is better)
Translates to: RGRHPHPTLRRAPGLFAYLTAVA*KHSTAE
Trigger: CTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAG...GTAAGCGAACAGCCCCGGAGCTCGGCGGAGAGTAGGGTGGGGGTGGCGTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR CCA 90 bp TCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGCGATTCTGGGCAGCTGGGTaGTCTCCCCGGACAGGCAGC +
Preference number: 2 (lower is better)
Translates to: SRPPRSDHWLQRSAKAWRFWAAG*SPRTGS
Trigger: GCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAA...TCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495483.5
ENST00000651150.1
3UTR-3UTR TCA 90 bp CGGCTGTTGCCTGCAAACACTCCACGGCAGAGACTGTCCATGGCTCAGGTCCAACTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: RLLPANTPRQRLSMAQVQLLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...TTGGACCTGAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651150.1
3UTR-3UTR TCA 90 bp ACAGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCCTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCG +
Preference number: 2 (lower is better)
Translates to: TATDTAVMALRARARGAALANEC*VWLWGP
Trigger: CGGACCCCACAGCCAGACTCAGCACTCATTCGCCAG...GGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR TCA 90 bp TCCCCAGGGGGTCGCCTACAACGCGTTCCAGGTGGGCAGGCTCAGGCGCTGCTCGGGCATTCGAGAGAGTaGGAAGTTTTGGGTAACGCC +
Preference number: 2 (lower is better)
Translates to: SPGGRLQRVPGGQAQALLGHSRE*EVLGNA
Trigger: GGCGTTACCCAAAACTTCTCACTCTCTCGAATGCCC...GAGCAGCGCCTGAGCCTGCCCACCTGGAACGCGTTGTAGGCGACCCCCTGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR GCA 90 bp ACGGGAATACAAAAATGCGCTAGAGCGGTCCGCAACGCTGTAGCCTGCGTAAGGGGCAGGCTCAGGCGCTaGTCCCTCACAAGCCCCCGG +
Preference number: 2 (lower is better)
Translates to: TGIQKCARAVRNAVACVRGRLRR*SLTSPR
Trigger: CCGGGGGCTTGTGAGGGAGCAGCGCCTGAGCCTGCC...CCTTACGCAGGCTACAGCGTTGCGGACCGCTCTAGCGCATTTTTGTATTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR CCA 90 bp GAGACGAGCCTGAGCAGGGACGGGGTCCTAGGTGGAAGTATGGACGGGGGCCGGGCAAAAGCAAGAGACTaGGATAGGATGGGCGTGCTC +
Preference number: 2 (lower is better)
Translates to: ETSLSRDGVLGGSMDGGRAKARD*DRMGVL
Trigger: GAGCACGCCCATCCTATCCCAGTCTCTTGCTTTTGC...CCGGCCCCCGTCCATACTTCCACCTAGGACCCCGTCCCTGCTCAGGCTCGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR TCA 90 bp CCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: PGQADGLLGTADSPQLQTLLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...TGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp CCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTCCTGTTCTGGGCAGCTaGGTGGTCTCCCCGGACAGG +
Preference number: 2 (lower is better)
Translates to: PNPWTGRWAPWYCRFTTAPVLGS*VVSPDR
Trigger: CCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG...AGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495483.5
ENST00000651150.1
3UTR-3UTR CCA 90 bp CACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGGCAGGCCCAGTAATATaGAACGATGGGTTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: HCSDGTQGTSQRGSLSREAGPVI*NDGFAQ
Trigger: CTGAGCAAACCCATCGTTCCATATTACTGGGCCTGC...CTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GCAGGGGGTGCCACTGACACACTGGGAGAGGGCTCAGCCAACCACAAGGTGATACCCTGGACAGGCAGATaGGCTCCTTGGTACTGCAGA +
Preference number: 2 (lower is better)
Translates to: AGGATDTLGEGSANHKVIPWTGR*APWYCR
Trigger: TCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGG...TATCACCTTGTGGTTGGCTGAGCCCTCTCCCAGTGTGTCAGTGGCACCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR TCA 90 bp CCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: PGQADGLLGTADSPQLQTPRPGE*VLSLAV
Trigger: CACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGG...TGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp GTCCGCCCTGCCCCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 2 (lower is better)
Translates to: VRPAPSSRPSNMERWVCSGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...TGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGCAGGGCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR CAA 90 bp TTCGCTTACAGCCCCCAGGTGGTCACGGTCCCTGCACCTGAGGAGTaGGCACCCAGGCACATGAAGAATAGAAGGAGCCTGTTTCCTACT +
Preference number: 2 (lower is better)
Translates to: FAYSPQVVTVPAPEE*APRHMKNRRSLFPT
Trigger: AGTAGGAAACAGGCTCCTTCTATTCTTCATGTGCCTGGGTGCCAACTCCTCAGGTGCAGGGACCGTGACCACCTGGGGGCTGTAAGCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR TCA 90 bp AGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTCTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: SSCVDGPSSGSASPSVLILLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...AATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCAGCTCAAGTAATATGGAACGATaGGTTTGCTCAGCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: VMALRARARGAASAGSSSSNMER*VCSAWK
Trigger: CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACT...TGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GCAGGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCACCACGAAGTGACCACTaGCTCCAGCGCTCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: AGSSSLSTEAGMALITWSPRSDH*LQRSAK
Trigger: CTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGG...TGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR TCA 90 bp ACGGGAATACAAAAATGCGCTAGAGCGGTCCGCAACGCTGTAGCCTGCGTAAGGTCCACGGTCCTGTCATaGCTCTGTCGCCACTTCAAC +
Preference number: 2 (lower is better)
Translates to: TGIQKCARAVRNAVACVRSTVLS*LCRHFN
Trigger: GTTGAAGTGGCGACAGAGTCATGACAGGACCGTGGA...CCTTACGCAGGCTACAGCGTTGCGGACCGCTCTAGCGCATTTTTGTATTCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR GCA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTCAGGACACTGACTGCTaGCTGGCGCCCACTCTCTAT +
Preference number: 2 (lower is better)
Translates to: WTKQWLGISFSPNCVAAAQDTDC*LAPTLY
Trigger: ATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTG...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp TGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACTTCTCATCAGGCTCTTTaGCCCGGGGCTTGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: WTGRWAPWYCRFTTATDTSHQAL*PGAWSA
Trigger: AGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGA...AGTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651150.1
3UTR-3UTR CCA 90 bp TTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTACCTGTTCTGGGCAGCTaGGTGGTCTCCCCGGACAGG +
Preference number: 2 (lower is better)
Translates to: LCRWTKQWLGISFSPNCVPVLGS*VVSPDR
Trigger: CCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG...TACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495483.5
ENST00000651150.1
3UTR-3UTR CCA 90 bp TGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACTCGCTCAGCCAAGGCCTaGCGAATGAGTGCTGAGTCT +
Preference number: 2 (lower is better)
Translates to: WTGRWAPWYCRFTTATDTRSAKA*RMSAES
Trigger: AGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCG...AGTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCAGGCAGATGGGCTCCTTaGTACTGCAGATTCACCACA +
Preference number: 2 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPGRWAP*YCRFTT
Trigger: TGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCC...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp TGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCCGCAAATGTCCAAATCCCTaGACAGGCAGATGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: WLGISFSPNCVAAASWARKCPNP*TGRWAP
Trigger: AGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTT...GCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCACAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 2 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR TCA 90 bp CAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: QGKQLSHTRFPGLLDLLKPRPGE*VLSLAV
Trigger: CACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGG...CTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR TCA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCAGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 2 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPDSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp CCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 2 (lower is better)
Translates to: PNPWTGRWAPWYCRFTTAGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...AGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCATGGGCTCCTTGGTACTaGAGATTCACCACAGCTACA +
Preference number: 2 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPWAPWY*RFTTAT
Trigger: TGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCA...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp GACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATACAGGACACTGACTGCTaGCTGGCGCCCACTCTCTAT +
Preference number: 2 (lower is better)
Translates to: DCCLAPTLYTVINSNSLIQDTDC*LAPTLY
Trigger: ATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTG...TATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000652100.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp CTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACCGCTGGGCAAAACTGTaGACAGTCTCATCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: LDRQMGSLVLQIHHSYRHRWAKL*TVSSGS
Trigger: AGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCG...GTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651150.1
3UTR-3UTR CCA 90 bp CAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTC +
Preference number: 2 (lower is better)
Translates to: QGKQLSHTRFPGLLDLLKGPRRR*AKLCTV
Trigger: GACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACC...CTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650741.1
ENST00000651150.1
3UTR-3UTR CCA 90 bp CCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 2 (lower is better)
Translates to: PNPWTGRWAPWYCRFTTAMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...AGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GCAGCCTCAGCAGGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 2 (lower is better)
Translates to: AASAGSSSLSTEAGMALIMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...TATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp ATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACGGCAGATGGGCTCCTTaGTACTGCAGATTCACCACA +
Preference number: 2 (lower is better)
Translates to: MSKSLDRQMGSLVLQIHHGRWAP*YCRFTT
Trigger: TGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCC...GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp CTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGCCCAGGACACTGACTaGTGCCTGGCGCCCACTCTC +
Preference number: 2 (lower is better)
Translates to: LVFASDLVYTGECSSCVDAQDTD*CLAPTL
Trigger: GAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGC...ATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp ATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACGCAGGCCCAGTAATATaGAACGATGGGTTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: MSKSLDRQMGSLVLQIHHAGPVI*NDGFAQ
Trigger: CTGAGCAAACCCATCGTTCCATATTACTGGGCCTGC...GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCCAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 2 (lower is better)
Translates to: VYWGMQFLCRWTKQWLGIQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...GATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR TCA 90 bp TCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 2 (lower is better)
Translates to: SKSLDRQMGSLVLQIHHSSSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...GCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR TCA 90 bp GCAGCCTCAGCAGGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATATCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 2 (lower is better)
Translates to: AASAGSSSLSTEAGMALISSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...TATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp AGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTG +
Preference number: 2 (lower is better)
Translates to: SSSLSTEAGMALITWSASMERWV*SAWKRL
Trigger: CAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCAT...GGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp ACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTG +
Preference number: 2 (lower is better)
Translates to: TDCCLAPTLYTVINSNSLMERWV*SAWKRL
Trigger: CAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCAT...GAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652473.1
3UTR-3UTR GCA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCAGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 2 (lower is better)
Translates to: AQGKQLSHTRFPGLLDLLMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...CAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 2 (lower is better)
Translates to: VYWGMQFLCRWTKQWLGIMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...GATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp TGCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTCAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 2 (lower is better)
Translates to: CSGKATESYTIPRTPGSSQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...AGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCAAACAGCTCCTACAATaGAGCACAGAGGAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: ECSSCVDGPSSGSASPSVKQLLQ*STEEPS
Trigger: AGAGGGCTCCTCTGTGCTCCATTGTAGGAGCTGTTT...GACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652100.1
3UTR-3UTR GCA 90 bp GAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGGCACCAAATGTGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 2 (lower is better)
Translates to: ESYTIPRTPGSSEDGTKCGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...ACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp GGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 2 (lower is better)
Translates to: GKQLSHTRFPGLLDLLKMGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...CATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR TCA 90 bp GACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATATCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 2 (lower is better)
Translates to: DCCLAPTLYTVINSNSLISSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...TATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp TGCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTG +
Preference number: 2 (lower is better)
Translates to: CSGKATESYTIPRTPGSSMERWV*SAWKRL
Trigger: CAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCAT...AGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp GGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGTGGGCTCCTTGGTACTaGAGATTCACCACAGCTACA +
Preference number: 2 (lower is better)
Translates to: GKQLSHTRFPGLLDLLKMWAPWY*RFTTAT
Trigger: TGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCA...CATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp ACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGGCACCAAATGTCCAAATCATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 2 (lower is better)
Translates to: TRFPGLLDLLKMAPNVQIMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...GATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGAAATGTCCAAATCCCTaGACAGGCAGATGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: GKQLSHTRFPGLLDLLKMKCPNP*TGRWAP
Trigger: AGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTT...CATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR GCA 90 bp AGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: RWTKQWLGISFSPNCVAAVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...AGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp CTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATACACTGACTGCTGCCTaGCGCCCACTCTCTATACAG +
Preference number: 2 (lower is better)
Translates to: LVFASDLVYTGECSSCVDTLTAA*RPLSIQ
Trigger: CTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGT...ATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
3UTR-3UTR CCA 90 bp GACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATATTCATGAATGAGAGTTaGGGATCAGCTGTTAGGTTC +
Preference number: 2 (lower is better)
Translates to: DCCLAPTLYTVINSNSLIFMNES*GSAVRF
Trigger: GAACCTAACAGCTGATCCCCAACTCTCATTCATGAA...TATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537829.1
3UTR-3UTR TCA 90 bp TTTATTTTCATGAATGAGAGTTGGGGATCAGCTGTTAGGTTCTGTGCCCAGGACCAGGAATTGCCTAGCTaGCTCTGGAAGGAAAGGATG +
Preference number: 2 (lower is better)
Translates to: FIFMNESWGSAVRFCAQDQELPS*LWKERM
Trigger: CATCCTTTCCTTCCAGAGTCAGCTAGGCAATTCCTG...GTCCTGGGCACAGAACCTAACAGCTGATCCCCAACTCTCATTCATGAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537829.1
3UTR-3UTR GCA 90 bp AGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: SSCVDGPSSGSASPSVLIVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...AATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR TCA 90 bp ACTCTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTATCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 2 (lower is better)
Translates to: TLVFASDLVYTGECSSCVSSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...TACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
3UTR GCA 72 bp TCACAAGCCCCCGGCCACGCGGTGTCTGGGACCGGGTaGCTAGTCAGCCCGGGTGGCTCCGCCCCGAGGCCC +
Preference number: 3 (lower is better)
Translates to: SQAPGHAVSGTG*LVSPGGSAPRP
Trigger: GGGCCTCGGGGCGGAGCCACCCGGGCTGACTAGGCACCCGGTCCCAGACACCGCGTGGCCGGGGGCTTGTGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 72 bp CGCTGCTCCCTCACAAGCCCCCGGCCACGCGGTGTCTaGGACCGGGTGCCTAGTCAGCCCGGGTGGCTCCGC +
Preference number: 3 (lower is better)
Translates to: RCSLTSPRPRGV*DRVPSQPGWLR
Trigger: GCGGAGCCACCCGGGCTGACTAGGCACCCGGTCCCAGACACCGCGTGGCCGGGGGCTTGTGAGGGAGCAGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 72 bp CGCAGCGCCCGCTTCCAAGATGGCGGCAGCGATGCCTaGCCGGCTGTTGGGGTGGCGGTGACGACAGGCAGC +
Preference number: 3 (lower is better)
Translates to: RSARFQDGGSDA*PAVGVAVTTGS
Trigger: GCTGCCTGTCGTCACCGCCACCCCAACAGCCGGGCAGGCATCGCTGCCGCCATCTTGGAAGCGGGCGCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 72 bp CCGCTCCCCAGGGGGTCGCCTACAACGCGTTCCAGGTaGGCAGGCTCAGGCGCTGCTCCCTCACAAGCCCCC +
Preference number: 3 (lower is better)
Translates to: PLPRGSPTTRSR*AGSGAAPSQAP
Trigger: GGGGGCTTGTGAGGGAGCAGCGCCTGAGCCTGCCCACCTGGAACGCGTTGTAGGCGACCCCCTGGGGAGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 72 bp GCCTACAACGCGTTCCAGGTGGGCAGGCTCAGGCGCTaGTCCCTCACAAGCCCCCGGCCACGCGGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: AYNAFQVGRLRR*SLTSPRPRGVW
Trigger: CCAGACACCGCGTGGCCGGGGGCTTGTGAGGGAGCAGCGCCTGAGCCTGCCCACCTGGAACGCGTTGTAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR TCA 72 bp GCTCCAGCGCTCAGCCAAGGCCTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCGCCCTGCCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: APALSQGLANEC*VWLWGPPCPQQ
Trigger: CTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR CCA 72 bp CCTGGAGACGAGCCTGAGCAGGGACGGGGTCCTAGGTaGAAGTATGGACGGGGGCCGGGCGGGCTCACGTTG +
Preference number: 3 (lower is better)
Translates to: PGDEPEQGRGPR*KYGRGPGGLTL
Trigger: CAACGTGAGCCCGCCCGGCCCCCGTCCATACTTCCACCTAGGACCCCGTCCCTGCTCAGGCTCGTCTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 72 bp GCCGAGCTCCGGGGCTGTTCGCTTACAGCCCCCAGGTaGTCACGGTCCCTGCACCTGAGGAGTTGGCACCCA +
Preference number: 3 (lower is better)
Translates to: AELRGCSLTAPR*SRSLHLRSWHP
Trigger: TGGGTGCCAACTCCTCAGGTGCAGGGACCGTGACCACCTGGGGGCTGTAAGCGAACAGCCCCGGAGCTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR CAA 90 bp AGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGCGAATGCTGAGCTCACGGCTGTaGCCTGCAAACACTCCACGG +
Preference number: 3 (lower is better)
Translates to: RPPRSDHWLQRSAKAWRMLSSRL*PANTPR
Trigger: CCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAG...CATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR CCA 72 bp CTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCTaGAGGCTGAGCCCACAGACCGGCTGGCCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: LSLRDTFQRPSA*RLSPQTGWPLR
Trigger: TCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR GCA 72 bp GTGGCGGTGACGACAGGCAGCAAAAGACCAGGTATGTaGGCTGGGAATGCGTCGACACGGAGGCCTGGGATA +
Preference number: 3 (lower is better)
Translates to: VAVTTGSKRPGM*AGNASTRRPGI
Trigger: TATCCCAGGCCTCCGTGTCGACGCATTCCCAGCGCACATACCTGGTCTTTTGCTGCCTGTCGTCACCGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR TCA 72 bp GGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTaGATCCAAGCCAAGCTCAGAAACCTGCTCTCCACA +
Preference number: 3 (lower is better)
Translates to: GSWVVSPDRQHF*IQAKLRNLLST
Trigger: TGTGGAGAGCAGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR CAA 90 bp CCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTCTGAGCTCACGGCTGTaGCCTGCAAACACTCCACGG +
Preference number: 3 (lower is better)
Translates to: PNPWTGRWAPWYCRFTTALSSRL*PANTPR
Trigger: CCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAG...AGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR TCA 72 bp GTCAGCGGAGCACCAGAAACCGGCTCACTAGCCTCCTaGTCAGTCTCGGCCCAGAGGAAAATGAAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: VSGAPETGSLAS*SVSAQRKMKGL
Trigger: CAAGCCCTTCATTTTCCTCTGGGCCGAGACTGATCAGGAGGCTAGTGAGCCGGTTTCTGGTGCTCCGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 72 bp GACAGGCAGCAAAAGACCAGGTATGTGCGCTGGGAATaGGTCGACACGGAGGCCTGGGATAAAGGTTTGGGC +
Preference number: 3 (lower is better)
Translates to: DRQQKTRYVRWE*VDTEAWDKGLG
Trigger: GCCCAAACCTTTATCCCAGGCCTCCGTGTCGACGCATTCCCAGCGCACATACCTGGTCTTTTGCTGCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 72 bp GGTGACGACAGGCAGCAAAAGACCAGGTATGTGCGCTaGGAATGCGTCGACACGGAGGCCTGGGATAAAGGT +
Preference number: 3 (lower is better)
Translates to: GDDRQQKTRYVR*ECVDTEAWDKG
Trigger: ACCTTTATCCCAGGCCTCCGTGTCGACGCATTCCCAGCGCACATACCTGGTCTTTTGCTGCCTGTCGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR TCA 72 bp CGGTCCCTGCACCTGAGGAGTTGGCACCCAGGCACATaGAGAATAGAAGGAGCCTGTTTCCTACTTCGCCCT +
Preference number: 3 (lower is better)
Translates to: RSLHLRSWHPGT*RIEGACFLLRP
Trigger: AGGGCGAAGTAGGAAACAGGCTCCTTCTATTCTTCATGTGCCTGGGTGCCAACTCCTCAGGTGCAGGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR GCA 72 bp AAAGCAGGACCTGATGCTGAGCTCACGGCTGTTGCCTaGAAACACTCCACGGCAGAGACTGTCCATGGCTCA +
Preference number: 3 (lower is better)
Translates to: KAGPDAELTAVA*KHSTAETVHGS
Trigger: TGAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651150.1
3UTR-3UTR CAA 90 bp GTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCCTGAGCTCACGGCTGTaGCCTGCAAACACTCCACGG +
Preference number: 3 (lower is better)
Translates to: VYWGMQFLCRWTKQWLGILSSRL*PANTPR
Trigger: CCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAG...GATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR CAA 90 bp ACATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTTGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 3 (lower is better)
Translates to: TSLDLHEVTTGSSAQPRPWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...AGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR GCA 72 bp CCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTGGGAAAGCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: PSSRPSNMERWV*SAWKRLGKQDL
Trigger: CAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR GCA 72 bp TTTCCAGGCCTGCGGGATACAACGGGAATACAAAAATaGGCTAGAGCGGTCCGCAACGCTGTAGCCTGCGTA +
Preference number: 3 (lower is better)
Translates to: FPGLRDTTGIQK*ARAVRNAVACV
Trigger: TACGCAGGCTACAGCGTTGCGGACCGCTCTAGCGCATTTTTGTATTCCCGTTGTATCCCGCAGGCCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 72 bp AGGTATGTGCGCTGGGAATGCGTCGACACGGAGGCCTaGGATAAAGGTTTGGGCATTCGAGAGAGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: RYVRWECVDTEA*DKGLGIRESEK
Trigger: CTTCTCACTCTCTCGAATGCCCAAACCTTTATCCCAGGCCTCCGTGTCGACGCATTCCCAGCGCACATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR CAA 90 bp ATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGGCAGATGGGCTCCTaGGTACTGCAGATTCACCAC +
Preference number: 3 (lower is better)
Translates to: MSKSLDRQMGSLVLQIHHRQMGS*VLQIHH
Trigger: GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCT...GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CAA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTTCCTGGGCCCGCTGTaGAAACAGCTCCTACAATGG +
Preference number: 3 (lower is better)
Translates to: WTKQWLGISFSPNCVAAAFLGPL*KQLLQW
Trigger: CCATTGTAGGAGCTGTTTCAACAGCGGGCCCAGGAA...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652100.1
3UTR CCA 72 bp CTCACGTTGCTAGTAGGTAGGGCAAAAGCAAGAGACTaGGATAGGATGGGCGTGCTCCGAAAGAGCTGGGTT +
Preference number: 3 (lower is better)
Translates to: LTLLVGRAKARD*DRMGVLRKSWV
Trigger: AACCCAGCTCTTTCGGAGCACGCCCATCCTATCCCAGTCTCTTGCTTTTGCCCTACCTACTAGCAACGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 72 bp ATGAAGAATAGAAGGAGCCTGTTTCCTACTTCGCCCTaGGTACTCCTTAGGCCACTCCACGGTCCTGTCATG +
Preference number: 3 (lower is better)
Translates to: MKNRRSLFPTSP*VLLRPLHGPVM
Trigger: CATGACAGGACCGTGGAGTGGCCTAAGGAGTACCCAGGGCGAAGTAGGAAACAGGCTCCTTCTATTCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CCA 72 bp CTGTTAGGTTCTGTGCCCAGGACACTGACTGCTGCCTaGCGCCCACTCTCTATACAGTCATTAACAGCAACT +
Preference number: 3 (lower is better)
Translates to: LLGSVPRTLTAA*RPLSIQSLTAT
Trigger: AGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGCACAGAACCTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537829.1
ENST00000652473.1
3UTR-3UTR CAA 90 bp CTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGATGGGTTTGCTCAGCTaGGAAGAGACTGGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: LSTEAGMALITWSASRLLMGLLS*EETGKA
Trigger: TGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCAT...CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR-3UTR CAA 90 bp CTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 3 (lower is better)
Translates to: LTAAWRPLSIQSLTATPSWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...TGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
3UTR-3UTR CAA 90 bp GACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATATGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 3 (lower is better)
Translates to: DCCLAPTLYTVINSNSLIWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...TATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
3UTR CCA 72 bp TCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACC +
Preference number: 3 (lower is better)
Translates to: SLSTEAGMALIT*SASRLLSLRDT
Trigger: GGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR-3UTR CAA 90 bp AGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTTATGGAACGATGGGTTaGCTCAGCTTGGAAGAGACT +
Preference number: 3 (lower is better)
Translates to: RWTKQWLGISFSPNCVAAYGTMG*LSLEET
Trigger: AGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATA...AGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
3UTR CCA 72 bp TGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCA +
Preference number: 3 (lower is better)
Translates to: WGMQFLCRWTKQ*LGISFSPNCVA
Trigger: TGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
3UTR CCA 72 bp AACTGGTTCTTGGTCTTGTGTAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCA +
Preference number: 3 (lower is better)
Translates to: NWFLVLCRWTKQ*LGISFSPNCVA
Trigger: TGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGACCAAGAACCAGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR-3UTR CAA 90 bp ACTCTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAAGGCAGATGGGCTCCTaGGTACTGCAGATTCACCAC +
Preference number: 3 (lower is better)
Translates to: TLVFASDLVYTGECSSCVRQMGS*VLQIHH
Trigger: GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCT...TACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR TCA 72 bp GTCAGGAATTGCCTAGCTGACTCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGAATGCAGTTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: VRNCLADSSFCQ*PSVYWGMQFLC
Trigger: ACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGAGTCAGCTAGGCAATTCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCACCCCGCCGGCGCTCTaGTGGGTGCAGATAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TAVMALRARARGAASAGSTPPAL*WVQIRA
Trigger: GGCCCTTATCTGCACCCAGCAGAGCGCCGGCGGGGT...GCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CGCCACCCCCACCCTACTCTCCGCCGAGCTCCGGGGCTGTTCGCTTACAGCCCCTATGTGCGCTGGGAATaGGTCGACACGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RHPHPTLRRAPGLFAYSPYVRWE*VDTEAW
Trigger: CCAGGCCTCCGTGTCGACGCATTCCCAGCGCACATA...GGGGCTGTAAGCGAACAGCCCCGGAGCTCGGCGGAGAGTAGGGTGGGGGTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp AGAGGAACCTGTTCTGGGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTGTGGCGGCCAAGCCGCTaGTGCCTCCGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: RGTCSGQLGGLPGQAALLWRPSR*CLRPAR
Trigger: TCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCA...CAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495483.5
ENST00000651150.1
CDS-3UTR CCA 90 bp ACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCCCTGTTCTGGGCAGCTaGGTGGTCTCCCCGGACAGG +
Preference number: 4 (lower is better)
Translates to: TAVMALRARARGAASAGSPVLGS*VVSPDR
Trigger: CCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG...GCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGGGACGGGGTCCTAGGTaGAAGTATGGACGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: HCSDGTQGTSQRGSLSREGRGPR*KYGRGP
Trigger: CGGCCCCCGTCCATACTTCCACCTAGGACCCCGTCC...CTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp CGCCACCCCCACCCTACTCTCCGCCGAGCTCCGGGGCTGTTCGCTTACAGCCCCACCAGGTATGTGCGCTaGGAATGCGTCGACACGGAG +
Preference number: 4 (lower is better)
Translates to: RHPHPTLRRAPGLFAYSPTRYVR*ECVDTE
Trigger: CTCCGTGTCGACGCATTCCCAGCGCACATACCTGGT...GGGGCTGTAAGCGAACAGCCCCGGAGCTCGGCGGAGAGTAGGGTGGGGGTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp GTCCGCCCTGCCCCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCATGGCGGCCAAGCCGCTaGTGCCTCCGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: VRPAPSSRPSNMERWVCSWRPSR*CLRPAR
Trigger: TCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCA...TGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGCAGGGCGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGTGGCGGCCAAGCCGCTaGTGCCTCCGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: ISRPPRSDHWLQRSAKAWWRPSR*CLRPAR
Trigger: TCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCA...CCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGCGACTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRPPRSDHWLQRSAKAWRLLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...TCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AGCCCCCAGGTGGTCACGGTCCCTGCACCTGAGGAGTTGGCACCCAGGCACATGCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPQVVTVPAPEELAPRHMPRPGE*VLSLAV
Trigger: CACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGG...CATGTGCCTGGGTGCCAACTCCTCAGGTGCAGGGACCGTGACCACCTGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp GTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCAGCTCAGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: VMALRARARGAASAGSSSGPRRR*AKLCTV
Trigger: GACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACC...TGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCCGCCTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WLGISFSPNCVAAASWARLLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...GCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCGGCTCACTAGCCTCCTaGTCAGTCTCGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SYRHCSDGTQGTSQRGSLGSLAS*SVSAQR
Trigger: CCTCTGGGCCGAGACTGATCAGGAGGCTAGTGAGCC...GAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp GGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCTACCCCGCCGGCGCTCTaGTGGGTGCAGATAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GQPPDCCPLEIPSSALLPTPPAL*WVQIRA
Trigger: GGCCCTTATCTGCACCCAGCAGAGCGCCGGCGGGGT...AGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TCAGGTGGGTTTCAAGGGCCTGAGGCAACATCTCTAGACCTCCACGAAGTGACCCCACGGTCCGGCCCATaGGGAAACCCCGCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SGGFQGPEATSLDLHEVTPRSGP*GNPAGA
Trigger: AGCGCCGGCGGGGTTTCCGCATGGGCCGGACCGTGG...GGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp CCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACAGGCGGCAGCGATGCCTaGCCGGCTGTTGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PGQADGLLGTADSPQLQTGGSDA*PAVGVA
Trigger: CGCCACCCCAACAGCCGGGCAGGCATCGCTGCCGCC...TGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp GTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCAGCTCACGCTCAGCCAAGGCCTaGCGAATGAGTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VMALRARARGAASAGSSSRSAKA*RMSAES
Trigger: AGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCG...TGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGCCACGAAGTGACCACTaGCTCCAGCGCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RHCSDGTQGTSQRGSLSRPRSDH*LQRSAK
Trigger: CTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGG...CCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGCGCCCGCTTCCAAGATGGCGGCAGCGATGCCTGCCCGGCTGTTGGGGTGGCGATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: SARFQDGGSDACPAVGVAMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...CGCCACCCCAACAGCCGGGCAGGCATCGCTGCCGCCATCTTGGAAGCGGGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp GTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCAGCTCACCCTGGACAGGCAGATaGGCTCCTTGGTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VMALRARARGAASAGSSSPWTGR*APWYCR
Trigger: TCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGG...TGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CCTGAGGCAACATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCGGCCACGCGGTGTCTaGGACCGGGTGCCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: PEATSLDLHEVTTGSSAQRPRGV*DRVPSQ
Trigger: CTGACTAGGCACCCGGTCCCAGACACCGCGTGGCCG...CTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp GCAGGGGGTGCCACTGACACACTGGGAGAGGGCTCAGCCAACCACAAGGTGATACTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: AGGATDTLGEGSANHKVILANEC*VWLWGP
Trigger: CGGACCCCACAGCCAGACTCAGCACTCATTCGCCAG...TATCACCTTGTGGTTGGCTGAGCCCTCTCCCAGTGTGTCAGTGGCACCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp ATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGCTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ISRPPRSDHWLQRSAKAWLANEC*VWLWGP
Trigger: CGGACCCCACAGCCAGACTCAGCACTCATTCGCCAG...CCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SYRHCSDGTQGTSQRGSLPRPGE*VLSLAV
Trigger: CACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGG...GAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCACCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ATDTAVMALRARARGAASPRPGE*VLSLAV
Trigger: CACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGG...TGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCACTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPLLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTACCCCGCCGGCGCTCTaGTGGGTGCAGATAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TWSASRLLSLRDTFQRPSTPPAL*WVQIRA
Trigger: GGCCCTTATCTGCACCCAGCAGAGCGCCGGCGGGGT...AGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ACATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTAGATGGCGGCAGCGATaGCTGCCCGGCTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TSLDLHEVTTGSSAQPRPRWRQR*LPGCWG
Trigger: ACCCCAACAGCCGGGCAGGCATCGCTGCCGCCATCT...AGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp TGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCTTCTGGGCAGCTGGGTaGTCTCCCCGGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: WSASRLLSLRDTFQRPSAFWAAG*SPRTGS
Trigger: GCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAA...GGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGCGCTCAGCCAAGGCCTaGCGAATGAGTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RHCSDGTQGTSQRGSLSRRSAKA*RMSAES
Trigger: AGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCG...CCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGAGGAACCTGTTCTGGGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTGCCACGAAGTGACCACTaGCTCCAGCGCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RGTCSGQLGGLPGQAALLPRSDH*LQRSAK
Trigger: CTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGG...CAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495483.5
ENST00000651150.1
CDS-3UTR TCA 90 bp ATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTGGCGGAGTAGCCCCCTaGGGCCAGTGGGTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ITWSASRLLSLRDTFQRPGGVAP*GQWVGH
Trigger: ATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCC...AGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CCTGAGGCAACATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PEATSLDLHEVTTGSSAQLANEC*VWLWGP
Trigger: CGGACCCCACAGCCAGACTCAGCACTCATTCGCCAG...CTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AGAGGAACCTGTTCTGGGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTGCAGGGAGCAGCTCACTaGGCACTGAAGCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: RGTCSGQLGGLPGQAALLQGAAH*ALKLEW
Trigger: CCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTG...CAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495483.5
ENST00000651150.1
CDS-3UTR TCA 90 bp GCCCCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAGCTTGGAAGCACGGTCCCTGCACCTaGGGAGTTGGCACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: APSSRPSNMERWVCSAWKHGPCT*GVGTQA
Trigger: TGCCTGGGTGCCAACTCCTCAGGTGCAGGGACCGTG...CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp CCTGGAGACGAGCCTGAGCAGGGACGGGGTCCTAGGTGGAAGTATGGACGGGGGCTGAGGGGCAGGAAATaGAATCCCACTAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PGDEPEQGRGPRWKYGRGLRGRK*NPTSSL
Trigger: CAGACTGCTAGTGGGATTTCATTTCCTGCCCCTCAG...CCCCCGTCCATACTTCCACCTAGGACCCCGTCCCTGCTCAGGCTCGTCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp ACAGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCCTCACGGCTGTTGCCTaGAAACACTCCACGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TATDTAVMALRARARGAALTAVA*KHSTAE
Trigger: CTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAG...GGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCAGCTCAGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 4 (lower is better)
Translates to: VMALRARARGAASAGSSSGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...TGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACGGCAGGCTCAGGCGCTaGTCCCTCACAAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: MSKSLDRQMGSLVLQIHHGRLRR*SLTSPR
Trigger: CCGGGGGCTTGTGAGGGAGCAGCGCCTGAGCCTGCC...GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp AGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGCCAAGCTCAGAAACCTaGTCTCCACATGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RHCSDGTQGTSQRGSLSRPSSET*SPHAQE
Trigger: CTCCTGGGCATGTGGAGAGCAGGTTTCTGAGCTTGG...CCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651150.1
CDS-3UTR CCA 90 bp ACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTCCTGTTCTGGGCAGCTaGGTGGTCTCCCCGGACAGG +
Preference number: 4 (lower is better)
Translates to: TWSASRLLSLRDTFQRPSPVLGS*VVSPDR
Trigger: CCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG...AGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CGCTCAGCCAAGGCCTGGCGAATGAGTGCTGAGTCTGGCTGTGGGGTCCGCCCTGGCAGATGGGCTCCTTaGTACTGCAGATTCACCACA +
Preference number: 4 (lower is better)
Translates to: RSAKAWRMSAESGCGVRPGRWAP*YCRFTT
Trigger: TGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCC...AGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TAVMALRARARGAASAGSRWTKQ*LGISFS
Trigger: ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT...GCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: DTAVMALRARARGAASAGRWTKQ*LGISFS
Trigger: ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT...CCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGCCCCCAGGTGGTCACGGTCCCTGCACCTGAGGAGTTGGCACCCAGGCACATGTTGGTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SPQVVTVPAPEELAPRHMLVLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGACCAA...CATGTGCCTGGGTGCCAACTCCTCAGGTGCAGGGACCGTGACCACCTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp TGGCTCCAGCGCTCAGCCAAGGCCTGGCGAATGAGTGCTGAGTCTGGCTGTGGGGAGACTGGGATAGGATaGGCGTGCTCCGAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: WLQRSAKAWRMSAESGCGETGIG*ACSERA
Trigger: AGCTCTTTCGGAGCACGCCCATCCTATCCCAGTCTC...CCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp CTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCGGCGGAGTAGCCCCCTaGGGCCAGTGGGTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LITWSASRLLSLRDTFQRGGVAP*GQWVGH
Trigger: ATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCC...GCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGTGGGTTTCAAGGGCCTaGGGCAACATCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: RHCSDGTQGTSQRGSLSRWVSRA*GNISRP
Trigger: AGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCA...CCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGCTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSTEAGMALITWSASRLLLLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: DTAVMALRARARGAASAGDSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...CCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAGCTTGGAAGAGAACCCCGCCGGCGCTCTaGTGGGTGCAGATAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSSRPSNMERWVCSAWKRTPPAL*WVQIRA
Trigger: GGCCCTTATCTGCACCCAGCAGAGCGCCGGCGGGGT...TCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GTGCCCAGGACACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCCCAGGACACTGACTaGTGCCTGGCGCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: VPRTLTAAWRPLSIQSLTAQDTD*CLAPTL
Trigger: GAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGC...TGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACAGCCCAGGACACTGACTaGTGCCTGGCGCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: PGQADGLLGTADSPQLQTAQDTD*CLAPTL
Trigger: GAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGC...TGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652473.1
CDS-3UTR GCA 90 bp CTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGGTGTCTGGGACCGGGTaGCTAGTCAGCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSTEAGMALITWSASRLLVSGTG*LVSPGG
Trigger: GCCACCCGGGCTGACTAGGCACCCGGTCCCAGACAC...CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp GCAGCCTCAGCAGGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATACCTGTTCTGGGCAGCTaGGTGGTCTCCCCGGACAGG +
Preference number: 4 (lower is better)
Translates to: AASAGSSSLSTEAGMALIPVLGS*VVSPDR
Trigger: CCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG...TATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: WSASRLLSLRDTFQRPSAGPRRR*AKLCTV
Trigger: GACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACC...GGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GTCCGCCCTGCCCCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCACCCTGGACAGGCAGATaGGCTCCTTGGTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VRPAPSSRPSNMERWVCSPWTGR*APWYCR
Trigger: TCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGG...TGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGCAGGGCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGCAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: RHCSDGTQGTSQRGSLSRQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...CCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCGTGCCACTGACACACTaGGAGAGGGCTCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: WSASRLLSLRDTFQRPSAVPLTH*ERAQPT
Trigger: GGTTGGCTGAGCCCTCTCCCAGTGTGTCAGTGGCAC...GGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
3UTR CAA 72 bp AGGTGGAAGTATGGACGGGGGCCGGGCGGGCTCACGTaGCTAGTAGGTAGGGCAAAAGCAAGAGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: RWKYGRGPGGLT*LVGRAKARDWD
Trigger: ATCCCAGTCTCTTGCTTTTGCCCTACCTACTAGCAACGTGAGCCCGCCCGGCCCCCGTCCATACTTCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp ATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCTGGCGGCCAAGCCGCTaGTGCCTCCGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: MALITWSASRLLSLRDTFWRPSR*CLRPAR
Trigger: TCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCA...GAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTGGCGGAGTAGCCCCCTaGGGCCAGTGGGTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GMQFLCRWTKQWLGISFSGGVAP*GQWVGH
Trigger: ATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCC...ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTCTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ITWSASRLLSLRDTFQRPLANEC*VWLWGP
Trigger: CGGACCCCACAGCCAGACTCAGCACTCATTCGCCAG...AGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VQIPGQADGLLGTADSPQLANEC*VWLWGP
Trigger: CGGACCCCACAGCCAGACTCAGCACTCATTCGCCAG...CTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TWSASRLLSLRDTFQRPSPRPGE*VLSLAV
Trigger: CACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGG...AGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CCAAATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACGCCCCTCTAGGTaGGCCCTTCCAGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: PNVQIPGQADGLLGTADSPRPSR*ALPATP
Trigger: AGGGGTGGCTGGAAGGGCTCACCTAGAGGGGCGTGG...TGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp GGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCTTCTCATCAGGCTCTTTaGCCCGGGGCTTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GQPPDCCPLEIPSSALLPSHQAL*PGAWSA
Trigger: AGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGA...AGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp AGAGGAACCTGTTCTGGGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTGCGCTGGGCAAAACTGTaGACAGTCTCATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RGTCSGQLGGLPGQAALLRWAKL*TVSSGS
Trigger: AGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCG...CAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651150.1
CDS-3UTR GCA 90 bp GCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCACGCTGGGCAAAACTGTaGACAGTCTCATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ATDTAVMALRARARGAASRWAKL*TVSSGS
Trigger: AGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCG...TGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CCTGAGGCAACATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCAGGACACTGACTGCTaGCTGGCGCCCACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PEATSLDLHEVTTGSSAQQDTDC*LAPTLY
Trigger: ATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTG...CTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652473.1
CDS-3UTR CCA 90 bp ATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACCCGCCGGCGCTCTGCTaGGTGCAGATAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: MSKSLDRQMGSLVLQIHHPPALC*VQIRAT
Trigger: TGTGGCCCTTATCTGCACCCAGCAGAGCGCCGGCGG...GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGCCGCCGGCGCTCTGCTaGGTGCAGATAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: KQWLGISFSPNCVAAASWPPALC*VQIRAT
Trigger: TGTGGCCCTTATCTGCACCCAGCAGAGCGCCGGCGG...CCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGAGGCCCGCCGGCGCTCTGCTaGGTGCAGATAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: CLAPTLYTVINSNSLIGGPPALC*VQIRAT
Trigger: TGTGGCCCTTATCTGCACCCAGCAGAGCGCCGGCGG...GCCTCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: TWSASRLLSLRDTFQRPSGPRRR*AKLCTV
Trigger: GACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACC...AGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCCGCTCAGCCAAGGCCTaGCGAATGAGTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: WSASRLLSLRDTFQRPSARSAKA*RMSAES
Trigger: AGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCG...GGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCCGCCGCTCAGCCAAGGCCTaGCGAATGAGTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: WLGISFSPNCVAAASWARRSAKA*RMSAES
Trigger: AGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCG...GCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGCGGCAGATGGGCTCCTTaGTACTGCAGATTCACCACA +
Preference number: 4 (lower is better)
Translates to: SLDLHEVTTGSSAQPRPGGRWAP*YCRFTT
Trigger: TGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCC...GCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CCGGGGCTTGGTCAGCTCCCTCAGCCCAGCCCAAAACAGAGGTTTGGAGAAGGGCAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PGLGQLPQPSPKQRFGEGQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...CCCTTCTCCAAACCTCTGTTTTGGGCTGGGCTGAGGGAGCTGACCAAGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651150.1
CDS-3UTR CCA 90 bp ACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCATTTCCTACTTCGCCCTaGGTACTCCTTAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: TDTAVMALRARARGAASAFPTSP*VLLRPL
Trigger: GAGTGGCCTAAGGAGTACCCAGGGCGAAGTAGGAAA...TGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp AGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCGCAAAAGCAAGAGACTaGGATAGGATGGGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SYRHCSDGTQGTSQRGSLAKARD*DRMGVL
Trigger: GAGCACGCCCATCCTATCCCAGTCTCTTGCTTTTGC...GAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp CGCTCAGCCAAGGCCTGGCGAATGAGTGCTGAGTCTGGCTGTGGGGTCCGCCCTCCTGGGATAAAGGTTTaGGCATTCGAGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RSAKAWRMSAESGCGVRPPGIKV*AFERVR
Trigger: TCTCACTCTCTCGAATGCCCAAACCTTTATCCCAGG...AGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp GGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCTAGTACGCCTGAGTTCTaGGGTGCTCTGCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: GQPPDCCPLEIPSSALLPSTPEF*GALLAT
Trigger: TGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACT...AGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCTTCTGCCTGGAGGCTaGGCCCACAGACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: MALITWSASRLLSLRDTFLLPGG*AHRPAG
Trigger: GCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAG...GAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCACTCAGGGAAAGCAACTaGGTCATACACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: ATDTAVMALRARARGAASLRESN*VIHDSQ
Trigger: CTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAG...TGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GGCAACATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGTCCACGGTCCTGTCATaGCTCTGTCGCCACTTCAAC +
Preference number: 4 (lower is better)
Translates to: GNISRPPRSDHWLQRSAKSTVLS*LCRHFN
Trigger: GTTGAAGTGGCGACAGAGTCATGACAGGACCGTGGA...CTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp GGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCTCTGAGGTGCTCTGCTTaGCACACCTCTGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GQPPDCCPLEIPSSALLPLRCSA*HTSVGQ
Trigger: TTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAG...AGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GTCCGCCCTGCCCCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAAGTTCTGAGGTGCTCTaGTTGCCACACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VRPAPSSRPSNMERWVCSSSEVL*LPHLCR
Trigger: CCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACT...TGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGCAGGGCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTCTCCCAGACGCTCACTaGTCTCCACTAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: TWSASRLLSLRDTFQRPSLPDAH*SPLGPP
Trigger: AGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAG...AGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GCCCCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAGCTTGGAAGTCTCATCAGGCTCTTTaGCCCGGGGCTTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: APSSRPSNMERWVCSAWKSHQAL*PGAWSA
Trigger: AGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGA...CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCTGGAGGCTGAGCCCAGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 4 (lower is better)
Translates to: LLSLRDTFQRPSAWRLSPGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...TGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTGCCCAGGACACTGACTaGTGCCTGGCGCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: GMQFLCRWTKQWLGISFSAQDTD*CLAPTL
Trigger: GAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGC...ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
CDS-3UTR GCA 90 bp AGCCCCCAGGTGGTCACGGTCCCTGCACCTGAGGAGTTGGCACCCAGGCACATGAAGGGCTTGAGCTTCTaGTTTTACAAATCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SPQVVTVPAPEELAPRHMKGLSF*FYKSEG
Trigger: CCCCTCAGATTTGTAAAAGCAGAAGCTCAAGCCCTT...CATGTGCCTGGGTGCCAACTCCTCAGGTGCAGGGACCGTGACCACCTGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp GGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCCCGCCGGCGCTCTGCTaGGTGCAGATAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GMALITWSASRLLSLRDTPPALC*VQIRAT
Trigger: TGTGGCCCTTATCTGCACCCAGCAGAGCGCCGGCGG...GGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTCCTGTTCTGGGCAGCTaGGTGGTCTCCCCGGACAGG +
Preference number: 4 (lower is better)
Translates to: RWTKQWLGISFSPNCVAAPVLGS*VVSPDR
Trigger: CCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG...AGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAAAATGTCCAAATCCCTaGACAGGCAGATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ATDTAVMALRARARGAASKCPNP*TGRWAP
Trigger: AGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTT...TGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACCTTACAGCCCCCAGGTaGTCACGGTCCCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: MSKSLDRQMGSLVLQIHHLTAPR*SRSLHL
Trigger: CAGGTGCAGGGACCGTGACCACCTGGGGGCTGTAAG...GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp TGCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTTGCCTGCCCGGCTGTTaGGGTGGCGGTGACGACAGG +
Preference number: 4 (lower is better)
Translates to: CSGKATESYTIPRTPGSSCLPGC*GGGDDR
Trigger: CCTGTCGTCACCGCCACCCCAACAGCCGGGCAGGCA...AGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp TGCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTCGCCCGCTTCCAAGATaGCGGCAGCGATGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CSGKATESYTIPRTPGSSRPLPR*RQRCLP
Trigger: GGGCAGGCATCGCTGCCGCCATCTTGGAAGCGGGCG...AGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTACAACGCGTTCCAGGTaGGCAGGCTCAGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: WTKQWLGISFSPNCVAAATTRSR*AGSGAA
Trigger: AGCAGCGCCTGAGCCTGCCCACCTGGAACGCGTTGT...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp AGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTTGGCGGCCAAGCCGCTaGTGCCTCCGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: SDLVYTGECSSCVDGPSSWRPSR*CLRPAR
Trigger: TCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCA...ACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GCAGCCTCAGCAGGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATACAGGGAGCAGCTCACTaGGCACTGAAGCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: AASAGSSSLSTEAGMALIQGAAH*ALKLEW
Trigger: CCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTG...TATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCCAGGGAGCAGCTCACTaGGCACTGAAGCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: SKSLDRQMGSLVLQIHHSQGAAH*ALKLEW
Trigger: CCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTG...GCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GTGCCCAGGACACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACACTACAGACACTGCAGTaGTGGCACTCAGGGCACGAG +
Preference number: 4 (lower is better)
Translates to: VPRTLTAAWRPLSIQSLTLQTLQ*WHSGHE
Trigger: CTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAG...TGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537829.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACTGCAGTaGTGGCACTCAGGGCACGAG +
Preference number: 4 (lower is better)
Translates to: VQIPGQADGLLGTADSPQLQTLQ*WHSGHE
Trigger: CTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAG...CTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GCAGGGGGTGCCACTGACACACTGGGAGAGGGCTCAGCCAACCACAAGGTGATACTCAGGGAAAGCAACTaGGTCATACACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: AGGATDTLGEGSANHKVILRESN*VIHDSQ
Trigger: CTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAG...TATCACCTTGTGGTTGGCTGAGCCCTCTCCCAGTGTGTCAGTGGCACCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp TGCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTTGCAGGGGGTGCCACTaGCACACTGGGAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: CSGKATESYTIPRTPGSSCRGCH*HTGRGL
Trigger: GAGCCCTCTCCCAGTGTGTCAGTGGCACCCCCTGCA...AGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp GCCCAGGACACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCCTGAGGTGCTCTGCTTaGCACACCTCTGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: AQDTDCCLAPTLYTVINSLRCSA*HTSVGQ
Trigger: TTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAG...GCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652473.1
CDS-3UTR GCA 90 bp CTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACCTCCCAGACGCTCACTaGTCTCCACTAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: LDRQMGSLVLQIHHSYRHLPDAH*SPLGPP
Trigger: AGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAG...GTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTCTCACGGCTGTTGCCTaGAAACACTCCACGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PNPWTGRWAPWYCRFTTALTAVA*KHSTAE
Trigger: CTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAG...AGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp AGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: SYRHCSDGTQGTSQRGSLMERWV*SAWKRL
Trigger: CAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCAT...GAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCCGCGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 4 (lower is better)
Translates to: WLGISFSPNCVAAASWARGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...GCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: HCSDGTQGTSQRGSLSREVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...CTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCAGGGATAGGATGGGCGTaGTCCGAAAGAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPGIGWA*SERAGF
Trigger: AAACCCAGCTCTTTCGGAGCACGCCCATCCTATCCC...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp CTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCAACCTGCTCTCCACATaGCCAGGAGCAAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LITWSASRLLSLRDTFQRNLLST*PGARSG
Trigger: CCCGGACCTTGCTCCTGGGCATGTGGAGAGCAGGTT...GCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651150.1
CDS-3UTR CCA 90 bp ATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCCTGTTCTGGGCAGCTaGGTGGTCTCCCCGGACAGG +
Preference number: 4 (lower is better)
Translates to: MALITWSASRLLSLRDTFPVLGS*VVSPDR
Trigger: CCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG...GAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACCCACGAAGTGACCACTaGCTCCAGCGCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: MSKSLDRQMGSLVLQIHHPRSDH*LQRSAK
Trigger: CTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGG...GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GTGCCCAGGACACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACACCCTGGACAGGCAGATaGGCTCCTTGGTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VPRTLTAAWRPLSIQSLTPWTGR*APWYCR
Trigger: TCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGG...TGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537829.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACCCCTGGACAGGCAGATaGGCTCCTTGGTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LDRQMGSLVLQIHHSYRHPWTGR*APWYCR
Trigger: TCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGG...GTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CTGCTTCCTGGGCCCGCTGTTGAAACAGCTCCTACAATGGAGCACAGAGGAGCCAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LLPGPAVETAPTMEHRGARWTKQ*LGISFS
Trigger: ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT...GGCTCCTCTGTGCTCCATTGTAGGAGCTGTTTCAACAGCGGGCCCAGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652100.1
3UTR CAA 72 bp AGCGGTCCGCAACGCTGTAGCCTGCGTAAGGAACAATaGATACTAAGTGGCACTAGGCTGCAGGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGPQRCSLRKEQ*ILSGTRLQGVP
Trigger: TGGCACCCCCTGCAGCCTAGTGCCACTTAGTATCAATTGTTCCTTACGCAGGCTACAGCGTTGCGGACCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp ATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCGGCGGGCAGTACGCCTaGGTTCTGAGGTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MALITWSASRLLSLRDTFGGQYA*VLRCSA
Trigger: AGCAGAGCACCTCAGAACTCAGGCGTACTGCCCGCC...GAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GMALITWSASRLLSLRDTPRPGE*VLSLAV
Trigger: CACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGG...GGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCCTACAGACACTGCAGTaGTGGCACTCAGGGCACGAG +
Preference number: 4 (lower is better)
Translates to: SSSLSTEAGMALITWSASLQTLQ*WHSGHE
Trigger: CTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAG...GGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: WSASRLLSLRDTFQRPSADSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...GGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ACAGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: TATDTAVMALRARARGAASSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...GGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GCAGCCTCAGCAGGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATACTGAGGTGCTCTGCTTaGCACACCTCTGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: AASAGSSSLSTEAGMALILRCSA*HTSVGQ
Trigger: TTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAG...TATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ATTCACCACAGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGAGTTCTGAGGTGCTCTaGTTGCCACACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: IHHSYRHCSDGTQGTSQRSSEVL*LPHLCR
Trigger: CCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACT...CCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCTCTCATCAGGCTCTTTaGCCCGGGGCTTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LITWSASRLLSLRDTFQRSHQAL*PGAWSA
Trigger: AGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGA...GCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTCGCTGGGCAAAACTGTaGACAGTCTCATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TWSASRLLSLRDTFQRPSRWAKL*TVSSGS
Trigger: AGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCG...AGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CCACGTAGAGGAACCTGTTCTGGGCAGCTGGGTGGTCTCCCCGGACAGGCAGCAGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: PRRGTCSGQLGGLPGQAAVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...TGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCTCTACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651150.1
CDS-3UTR GCA 90 bp ACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCCAGGACACTGACTGCTaGCTGGCGCCCACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: TDCCLAPTLYTVINSNSLQDTDC*LAPTLY
Trigger: ATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTG...GAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGCCTAACCTGCTCTCCACATaGCCTCAGAAGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GQPPDCCPLEIPSSALLPNLLST*PQKRRN
Trigger: GTTTCTCCTCTTCTGAGGGCATGTGGAGAGCAGGTT...AGGCAGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCAGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCA +
Preference number: 4 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPGQPPD*CPLEIP
Trigger: TGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539753.5
CDS-3UTR CCA 90 bp GTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: VYWGMQFLCRWTKQWLGIGPRRR*AKLCTV
Trigger: GACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACC...GATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: RWTKQWLGISFSPNCVAAGPRRR*AKLCTV
Trigger: GACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACC...AGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCCGCGCAGGCCCAGTAATATaGAACGATGGGTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: WLGISFSPNCVAAASWARAGPVI*NDGFAQ
Trigger: CTGAGCAAACCCATCGTTCCATATTACTGGGCCTGC...GCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCCCACGAAGTGACCACTaGCTCCAGCGCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GMALITWSASRLLSLRDTPRSDH*LQRSAK
Trigger: CTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGG...GGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCCCCTGGACAGGCAGATaGGCTCCTTGGTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: WGMQFLCRWTKQWLGISFPWTGR*APWYCR
Trigger: TCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGG...GAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GCAGCCTCAGCAGGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAACACTGACTGCTGCCTaGCGCCCACTCTCTATACAG +
Preference number: 4 (lower is better)
Translates to: AASAGSSSLSTEAGMALITLTAA*RPLSIQ
Trigger: CTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGT...TATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652473.1
CDS-3UTR TCA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTAGTACGCCTGAGTTCTaGGGTGCTCTGCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: WTKQWLGISFSPNCVAAASTPEF*GALLAT
Trigger: TGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACT...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YTGECSSCVDGPSSGSASPRPGE*VLSLAV
Trigger: CACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGG...AGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTGGGTTTCAAGGGCCTaGGGCAACATCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: ITWSASRLLSLRDTFQRPWVSRA*GNISRP
Trigger: AGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCA...AGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACTGGGTTTCAAGGGCCTaGGGCAACATCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: LDRQMGSLVLQIHHSYRHWVSRA*GNISRP
Trigger: AGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCA...GTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACATGGGTTTCAAGGGCCTaGGGCAACATCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: PGQADGLLGTADSPQLQTWVSRA*GNISRP
Trigger: AGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCA...TGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCAGGGAGCAGCTCACTaGGCACTGAAGCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: SLSTEAGMALITWSASRLQGAAH*ALKLEW
Trigger: CCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTG...CAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GGACTCCTGGATCTTCTGAAGATGGCACCAAATGTCCAAATCCCTGGACAGGCACTACAGACACTGCAGTaGTGGCACTCAGGGCACGAG +
Preference number: 4 (lower is better)
Translates to: GLLDLLKMAPNVQIPGQALQTLQ*WHSGHE
Trigger: CTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAG...TGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGTGGCACCCAGGCACATaGAGAATAGAAGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VQIPGQADGLLGTADSPQWHPGT*RIEGAC
Trigger: ACAGGCTCCTTCTATTCTTCATGTGCCTGGGTGCCA...CTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp ATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCTGTTGGGGTGGCGGTaGCGACAGGCAGCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: MALITWSASRLLSLRDTFLLGWR*RQAAKD
Trigger: GTCTTTTGCTGCCTGTCGTCACCGCCACCCCAACAG...GAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp CCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTAGTTCTGAGGTGCTCTaGTTGCCACACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PNPWTGRWAPWYCRFTTASSEVL*LPHLCR
Trigger: CCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACT...AGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGAACCCCGCCGGCGCTCTaGTGGGTGCAGATAAGGGCC +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGTPPAL*WVQIRA
Trigger: GGCCCTTATCTGCACCCAGCAGAGCGCCGGCGGGGT...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp AGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTCTCCCAGACGCTCACTaGTCTCCACTAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: RWTKQWLGISFSPNCVAALPDAH*SPLGPP
Trigger: AGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAG...AGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGACTCCCAGACGCTCACTaGTCTCCACTAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: CCLAPTLYTVINSNSLIGLPDAH*SPLGPP
Trigger: AGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAG...TCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCTCTCATCAGGCTCTTTaGCCCGGGGCTTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: ECSSCVDGPSSGSASPSVSHQAL*PGAWSA
Trigger: AGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGA...GACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGCTCACGGCTGTTGCCTaGAAACACTCCACGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AQGKQLSHTRFPGLLDLLLTAVA*KHSTAE
Trigger: CTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAG...CAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCTGGGCTCCTTGGTACTaGAGATTCACCACAGCTACA +
Preference number: 4 (lower is better)
Translates to: QWLGISFSPNCVAAASWAWAPWY*RFTTAT
Trigger: TGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCA...GGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCCAGGACACTGACTGCTaGCTGGCGCCCACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: VYWGMQFLCRWTKQWLGIQDTDC*LAPTLY
Trigger: ATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTG...GATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CAGCTGCTTCCTGGGCCCGCTGTTGAAACAGCTCCTGAGATAAGACACAGCCACGCAGGCCCAGTAATATaGAACGATGGGTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QLLPGPAVETAPEIRHSHAGPVI*NDGFAQ
Trigger: CTGAGCAAACCCATCGTTCCATATTACTGGGCCTGC...GTGGCTGTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGAAGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGCCACGAAGTGACCACTaGCTCCAGCGCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SCVDGPSSGSASPSVLIVPRSDH*LQRSAK
Trigger: CTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGG...CACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: QWLGISFSPNCVAAASWAMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...GGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000495483.5
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: TWSASRLLSLRDTFQRPSMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...AGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GTGCCCAGGACACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACACAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VPRTLTAAWRPLSIQSLTQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...TGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCACACTGACTGCTGCCTaGCGCCCACTCTCTATACAG +
Preference number: 4 (lower is better)
Translates to: TDCCLAPTLYTVINSNSLTLTAA*RPLSIQ
Trigger: CTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGT...GAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGAAGTACGCCTGAGTTCTaGGGTGCTCTGCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: CCLAPTLYTVINSNSLIGSTPEF*GALLAT
Trigger: TGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACT...TCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGCGGAGTAGCCCCCTaGGGCCAGTGGGTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LVFASDLVYTGECSSCVDGGVAP*GQWVGH
Trigger: ATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCC...ATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ACGGGAATACAAAAATGCGCTAGAGCGGTCCGCAACGCTGTAGCCTGCGTAAGGCAGCTCACTGAGCACTaGAGCTGGAATGGCACTAAT +
Preference number: 4 (lower is better)
Translates to: TGIQKCARAVRNAVACVRQLTEH*SWNGTN
Trigger: ATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTG...CCTTACGCAGGCTACAGCGTTGCGGACCGCTCTAGCGCATTTTTGTATTCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp CTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACCAGCTCACTGAGCACTaGAGCTGGAATGGCACTAAT +
Preference number: 4 (lower is better)
Translates to: LDRQMGSLVLQIHHSYRHQLTEH*SWNGTN
Trigger: ATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTG...GTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACACTGGGCATTCGAGAGAGTaGGAAGTTTTGGGTAACGCC +
Preference number: 4 (lower is better)
Translates to: WTGRWAPWYCRFTTATDTGHSRE*EVLGNA
Trigger: GGCGTTACCCAAAACTTCTCACTCTCTCGAATGCCC...AGTGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp GAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCTCCTGGGCCCGCTGTTaGAACAGCTCCTACAATGGA +
Preference number: 4 (lower is better)
Translates to: ECSSCVDGPSSGSASPSVSWARC*NSSYNG
Trigger: TCCATTGTAGGAGCTGTTTCAACAGCGGGCCCAGGA...GACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652100.1
CDS-3UTR GCA 90 bp GGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCTGAGGTGCTCTGCTTaGCACACCTCTGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GMQFLCRWTKQWLGISFSLRCSA*HTSVGQ
Trigger: TTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAG...ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CCAAATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACTGAGGTGCTCTGCTTaGCACACCTCTGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PNVQIPGQADGLLGTADSLRCSA*HTSVGQ
Trigger: TTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAG...TGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCAGTTCTGAGGTGCTCTaGTTGCCACACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LITWSASRLLSLRDTFQRSSEVL*LPHLCR
Trigger: CCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACT...GCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTCGCTGGGCAAAACTGTaGACAGTCTCATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WTKQWLGISFSPNCVAAARWAKL*TVSSGS
Trigger: AGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCG...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TGCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTCTCACGGCTGTTGCCTaGAAACACTCCACGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CSGKATESYTIPRTPGSSLTAVA*KHSTAE
Trigger: CTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAG...AGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGCTCACGGCTGTTGCCTaGAAACACTCCACGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGKQLSHTRFPGLLDLLKLTAVA*KHSTAE
Trigger: CTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAG...CTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 4 (lower is better)
Translates to: LITWSASRLLSLRDTFQRGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...GCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 4 (lower is better)
Translates to: WGMQFLCRWTKQWLGISFGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...GAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCGGTCAGCCTCCAGACTaGTGTCCCTTAGAGATACCT +
Preference number: 4 (lower is better)
Translates to: TDCCLAPTLYTVINSNSLGQPPD*CPLEIP
Trigger: AGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACC...GAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652473.1
CDS-3UTR GCA 90 bp GTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGTGGGCTCCTTGGTACTaGAGATTCACCACAGCTACA +
Preference number: 4 (lower is better)
Translates to: VQIPGQADGLLGTADSPQWAPWY*RFTTAT
Trigger: TGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCA...CTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCATCCCACTAGCAGTCTaGGTAGTGGAGTTGAACCCT +
Preference number: 4 (lower is better)
Translates to: SKSLDRQMGSLVLQIHHSIPLAV*VVELNP
Trigger: AGGGTTCAACTCCACTACGCAGACTGCTAGTGGGAT...GCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp CAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGCGCTCAGCCAAGGCCTaGCGAATGAGTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QGKQLSHTRFPGLLDLLKRSAKA*RMSAES
Trigger: AGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCG...CTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGACTGTCCATGGCTAGAGACGCCACCTTAAGGGTGAGACTAGGACTCAGGTCCATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: RLSMARDATLRVRLGLRSMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...GGACCTGAGTCCTAGTCTCACCCTTAAGGTGGCGTCTCTAGCCATGGACAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650741.1
CDS-3UTR CCA 90 bp TGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCGGCAGATGGGCTCCTTaGTACTGCAGATTCACCACA +
Preference number: 4 (lower is better)
Translates to: WGMQFLCRWTKQWLGISFGRWAP*YCRFTT
Trigger: TGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCC...GAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGAGGCGGCAGATGGGCTCCTTaGTACTGCAGATTCACCACA +
Preference number: 4 (lower is better)
Translates to: CLAPTLYTVINSNSLIGGGRWAP*YCRFTT
Trigger: TGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCC...GCCTCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TCAGGTGGGTTTCAAGGGCCTGAGGCAACATCTCTAGACCTCCACGAAGTGACCAAATGTCCAAATCCCTaGACAGGCAGATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGGFQGPEATSLDLHEVTKCPNP*TGRWAP
Trigger: AGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTT...GGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCAAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LTAAWRPLSIQSLTATPSRWTKQ*LGISFS
Trigger: ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT...TGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTCAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: WTKQWLGISFSPNCVAAAQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GCAGGGAGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCACAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: AGSSSLSTEAGMALITWSQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...TGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
3UTR CAA 72 bp TGGGAATGCGTCGACACGGAGGCCTGGGATAAAGGTTaGGGCATTCGAGAGAGTGAGAAGTTTTGGGTAACG +
Preference number: 4 (lower is better)
Translates to: WECVDTEAWDKG*GIRESEKFWVT
Trigger: CGTTACCCAAAACTTCTCACTCTCTCGAATGCCCAAACCTTTATCCCAGGCCTCCGTGTCGACGCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGLANEC*VWLWGP
Trigger: CGGACCCCACAGCCAGACTCAGCACTCATTCGCCAG...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GGACTCCTGGATCTTCTGAAGATGGCACCAAATGTCCAAATCCCTGGACAGGCATGGGTTTCAAGGGCCTaGGGCAACATCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: GLLDLLKMAPNVQIPGQAWVSRA*GNISRP
Trigger: AGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCA...TGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CAGGACACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACCAGCTCACTGAGCACTaGAGCTGGAATGGCACTAAT +
Preference number: 4 (lower is better)
Translates to: QDTDCCLAPTLYTVINSNQLTEH*SWNGTN
Trigger: ATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTG...GTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537829.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGCAGCTCACTGAGCACTaGAGCTGGAATGGCACTAAT +
Preference number: 4 (lower is better)
Translates to: LSTEAGMALITWSASRLLQLTEH*SWNGTN
Trigger: ATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTG...CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGCTACAGACACTGCAGTaGTGGCACTCAGGGCACGAG +
Preference number: 4 (lower is better)
Translates to: GKQLSHTRFPGLLDLLKMLQTLQ*WHSGHE
Trigger: CTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAG...CATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGAGGCGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: CLAPTLYTVINSNSLIGGDSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...GCCTCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537829.1
ENST00000651150.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTCTCAGGGAAAGCAACTaGGTCATACACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: TGECSSCVDGPSSGSASPLRESN*VIHDSQ
Trigger: CTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAG...AGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGCTCAGGGAAAGCAACTaGGTCATACACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSTEAGMALITWSASRLLLRESN*VIHDSQ
Trigger: CTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAG...CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCACCACAGCTACAGACAATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: PGQADGLLGTADSPQLQTMERWV*SAWKRL
Trigger: CAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCAT...TGTCTGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATGGGCTCCTTGGTACTaGAGATTCACCACAGCTACA +
Preference number: 4 (lower is better)
Translates to: LTAAWRPLSIQSLTATPSWAPWY*RFTTAT
Trigger: TGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCA...TGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537829.1
ENST00000652473.1
CDS-3UTR GCA 90 bp ACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTGGGCTCCTTGGTACTaGAGATTCACCACAGCTACA +
Preference number: 4 (lower is better)
Translates to: TGECSSCVDGPSSGSASPWAPWY*RFTTAT
Trigger: TGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCA...AGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTGGGCTCCTTGGTACTaGAGATTCACCACAGCTACA +
Preference number: 4 (lower is better)
Translates to: WTKQWLGISFSPNCVAAAWAPWY*RFTTAT
Trigger: TGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCA...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCAAAAGACCAGGTATGTaGGCTGGGAATGCGTCGACA +
Preference number: 4 (lower is better)
Translates to: LITWSASRLLSLRDTFQRKRPGM*AGNAST
Trigger: TGTCGACGCATTCCCAGCGCACATACCTGGTCTTTT...GCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp TGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCCGCAGTAATATGGAACGATaGGTTTGCTCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: WLGISFSPNCVAAASWARSNMER*VCSAWK
Trigger: CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACT...GCGGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCACCACGAAGTGACCACTaGCTCCAGCGCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: FASDLVYTGECSSCVDGPPRSDH*LQRSAK
Trigger: CTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGG...TGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: LITWSASRLLSLRDTFQRMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...GCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470607.5
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: WGMQFLCRWTKQWLGISFMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...GAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: WTKQWLGISFSPNCVAAAMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000495483.5
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CCAAATGTCCAAATCCCTGGACAGGCAGATGGGCTCCTTGGTACTGCAGATTCAGGCAGATGGGCTCCTTaGTACTGCAGATTCACCACA +
Preference number: 4 (lower is better)
Translates to: PNVQIPGQADGLLGTADSGRWAP*YCRFTT
Trigger: TGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCC...TGAATCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGGCACCAAATGTCCCTGGACAGGCAGATaGGCTCCTTGGTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: ESYTIPRTPGSSEDGTKCPWTGR*APWYCR
Trigger: TCTGCAGTACCAAGGAGCCCATCTGCCTGTCCAGGG...ACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCAAAATGTCCAAATCCCTaGACAGGCAGATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTAAWRPLSIQSLTATPSKCPNP*TGRWAP
Trigger: AGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTT...TGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537829.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGAAATGTCCAAATCCCTaGACAGGCAGATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KQWLGISFSPNCVAAASWKCPNP*TGRWAP
Trigger: AGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTT...CCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp CCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAGCTTGGAAGAGAAAATGTCCAAATCCCTaGACAGGCAGATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSSRPSNMERWVCSAWKRKCPNP*TGRWAP
Trigger: AGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTT...TCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SLSTEAGMALITWSASRLRWTKQ*LGISFS
Trigger: ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT...CAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ATTCACCACAGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGTGTCGCCACTTCAACTaGTTCTTGGTCTTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: IHHSYRHCSDGTQGTSQRCRHFN*FLVLCR
Trigger: TCTACACAAGACCAAGAACCAGTTGAAGTGGCGACA...CCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp GCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGGTCGACACGGAGGCCTaGGATAAAGGTTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: AQGKQLSHTRFPGLLDLLVDTEA*DKGLGI
Trigger: AATGCCCAAACCTTTATCCCAGGCCTCCGTGTCGAC...CAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR TCA 90 bp GCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: AQGKQLSHTRFPGLLDLLDSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...CAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGAGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: CCLAPTLYTVINSNSLIGDSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...TCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537829.1
ENST00000651150.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATACTCAGGGAAAGCAACTaGGTCATACACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: DCCLAPTLYTVINSNSLILRESN*VIHDSQ
Trigger: CTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAG...TATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ACACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCCCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLTAAWRPLSIQSLTATPPSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGG...GGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537829.1
CDS-3UTR TCA 90 bp TGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGACAGGAATTGCCTAGCTaGCTCTGGAAGGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: CCLAPTLYTVINSNSLIGQELPS*LWKERM
Trigger: CATCCTTTCCTTCCAGAGTCAGCTAGGCAATTCCTG...TCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537829.1
CDS-3UTR TCA 90 bp CAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCAAATGTCCAAATCCCTaGAGCTGGAATGGCACTAAT +
Preference number: 4 (lower is better)
Translates to: QWLGISFSPNCVAAASWAKCPNP*SWNGTN
Trigger: ATTAGTGCCATTCCAGCTTCAGGGATTTGGACATTT...GGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539753.5
ENST00000652100.1
CDS-3UTR GCA 90 bp TTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCATCTCATCAGGCTCTTTaGCCCGGGGCTTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FASDLVYTGECSSCVDGPSHQAL*PGAWSA
Trigger: AGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGA...TGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGCGCTGGGCAAAACTGTaGACAGTCTCATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SCVDGPSSGSASPSVLIVRWAKL*TVSSGS
Trigger: AGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCG...CACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GCCCAGGACACTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: AQDTDCCLAPTLYTVINSVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...GCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537829.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR GCA 90 bp CAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: QWLGISFSPNCVAAASWAVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...GGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GCCCCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAGCTTGGAAGAGTAATATGGAACGATaGGTTTGCTCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: APSSRPSNMERWVCSAWKSNMER*VCSAWK
Trigger: CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACT...CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGGCAGGCCCAGTAATATaGAACGATGGGTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLSTEAGMALITWSASRLAGPVI*NDGFAQ
Trigger: CTGAGCAAACCCATCGTTCCATATTACTGGGCCTGC...CAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTAGTACGCCTGAGTTCTaGGGTGCTCTGCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: SDLVYTGECSSCVDGPSSSTPEF*GALLAT
Trigger: TGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACT...ACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TTTATTTTCATGAATGAGAGTTGGGGATCAGCTGTTAGGTTCTGTGCCCAGGACCAGGGAGCAGCTCACTaGGCACTGAAGCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: FIFMNESWGSAVRFCAQDQGAAH*ALKLEW
Trigger: CCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCTG...GTCCTGGGCACAGAACCTAACAGCTGATCCCCAACTCTCATTCATGAAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537829.1
CDS-3UTR TCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACTACAGACACTGCAGTaGTGGCACTCAGGGCACGAG +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGLQTLQ*WHSGHE
Trigger: CTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAG...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: YTGECSSCVDGPSSGSASDSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...AGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGTCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: KQWLGISFSPNCVAAASWSSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...CCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp AGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTAGTTCTGAGGTGCTCTaGTTGCCACACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SSCVDGPSSGSASPSVLISSEVL*LPHLCR
Trigger: CCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACT...AATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACTCCCAGACGCTCACTaGTCTCCACTAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGLPDAH*SPLGPP
Trigger: AGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAG...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539753.5
ENST00000651150.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: SLSTEAGMALITWSASRLMERWV*SAWKRL
Trigger: CAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCAT...CAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp TGCTCAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGCAGGCCCAGTAATATaGAACGATGGGTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: CSGKATESYTIPRTPGSSAGPVI*NDGFAQ
Trigger: CTGAGCAAACCCATCGTTCCATATTACTGGGCCTGC...AGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCAAATGTCCAAATCCCTaGACAGGCAGATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: MALITWSASRLLSLRDTFKCPNP*TGRWAP
Trigger: AGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTT...GAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp AGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTACACTGACTGCTGCCTaGCGCCCACTCTCTATACAG +
Preference number: 4 (lower is better)
Translates to: SDLVYTGECSSCVDGPSSTLTAA*RPLSIQ
Trigger: CTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGT...ACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652100.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGGCACCAAATGTGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: ESYTIPRTPGSSEDGTKCDSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...ACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GGACTCCTGGATCTTCTGAAGATGGCACCAAATGTCCAAATCCCTGGACAGGCATCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: GLLDLLKMAPNVQIPGQASSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...TGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: VYWGMQFLCRWTKQWLGISSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...GATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAAAATGTCCAAATCCCTaGAGCTGGAATGGCACTAAT +
Preference number: 4 (lower is better)
Translates to: GECSSCVDGPSSGSASPSKCPNP*SWNGTN
Trigger: ATTAGTGCCATTCCAGCTTCAGGGATTTGGACATTT...TGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539753.5
ENST00000652100.1
CDS-3UTR GCA 90 bp GAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGGCACCAAATGTTGGGCTCCTTGGTACTaGAGATTCACCACAGCTACA +
Preference number: 4 (lower is better)
Translates to: ESYTIPRTPGSSEDGTKCWAPWY*RFTTAT
Trigger: TGTAGCTGTGGTGAATCTGCAGTACCAAGGAGCCCA...ACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: WTKQWLGISFSPNCVAAAVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGATGACGGGAATACAAAAATaGGCTAGAGCGGTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: GKQLSHTRFPGLLDLLKMTGIQK*ARAVRN
Trigger: GTTGCGGACCGCTCTAGCGCATTTTTGTATTCCCGT...CATCTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR GCA 90 bp AGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTTTTTATTTCCAGGCCTaGGGGATACAACGGGAATAC +
Preference number: 4 (lower is better)
Translates to: RWTKQWLGISFSPNCVAAFYFQA*GIQREY
Trigger: GTATTCCCGTTGTATCCCGCAGGCCTGGAAATAAAA...AGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp TGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTAATATGGAACGATaGGTTTGCTCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: WGMQFLCRWTKQWLGISFSNMER*VCSAWK
Trigger: CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACT...GAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ATTTTCATGAATGAGAGTTGGGGATCAGCTGTTAGGTTCTGTGCCCAGGACACTGGCAGATGGGCTCCTTaGTACTGCAGATTCACCACA +
Preference number: 4 (lower is better)
Translates to: IFMNESWGSAVRFCAQDTGRWAP*YCRFTT
Trigger: TGTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCC...AGTGTCCTGGGCACAGAACCTAACAGCTGATCCCCAACTCTCATTCATGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537829.1
CDS-3UTR CCA 90 bp CTGACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATTCATGAATGAGAGTTaGGGATCAGCTGTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: LTAAWRPLSIQSLTATPSFMNES*GSAVRF
Trigger: GAACCTAACAGCTGATCCCCAACTCTCATTCATGAA...TGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537829.1
CDS-3UTR TCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGATGGGTTTCAAGGGCCTaGGGCAACATCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGWVSRA*GNISRP
Trigger: AGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCA...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp AGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGACTCCTGGATCTTCTaGAGATGGCACCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: SDLVYTGECSSCVDGPSSDSWIF*RWHQMS
Trigger: GGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTC...ACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCACTCAGGGAAAGCAACTaGGTCATACACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: FASDLVYTGECSSCVDGPLRESN*VIHDSQ
Trigger: CTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAG...TGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp AGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: SSCVDGPSSGSASPSVLIMERWV*SAWKRL
Trigger: CAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCAT...AATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GGACTCCTGGATCTTCTGAAGATGGCACCAAATGTCCAAATCCCTGGACAGGCAAGTAATATGGAACGATaGGTTTGCTCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLLDLLKMAPNVQIPGQASNMER*VCSAWK
Trigger: CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACT...TGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTAGTAATATGGAACGATaGGTTTGCTCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GMQFLCRWTKQWLGISFSSNMER*VCSAWK
Trigger: CTTCCAAGCTGAGCAAACCCATCGTTCCATATTACT...ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACTCAGGGAAAGCAACTaGGTCATACACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGLRESN*VIHDSQ
Trigger: CTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAG...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp ATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCTGCTTTTACAAATCTaGGGGGCAGGAAATGAAATC +
Preference number: 4 (lower is better)
Translates to: MALITWSASRLLSLRDTFLLLQI*GAGNEI
Trigger: GATTTCATTTCCTGCCCCTCAGATTTGTAAAAGCAG...GAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CCA 90 bp CTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LVFASDLVYTGECSSCVDRWTKQ*LGISFS
Trigger: ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT...ATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ACTCTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAAGATGGACCAAGCAGTaGCTCGGCATCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TLVFASDLVYTGECSSCVRWTKQ*LGISFS
Trigger: ACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCT...TACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ACTCTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTACAGTTCTTGTGTAGATaGACCAAGCAGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: TLVFASDLVYTGECSSCVQFLCR*TKQWLG
Trigger: GCCGAGCCACTGCTTGGTCCATCTACACAAGAACTG...TACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGAAAACAGCTCCTACAATaGAGCACAGAGGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGKQLLQ*STEEPS
Trigger: AGAGGGCTCCTCTGTGCTCCATTGTAGGAGCTGTTT...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652100.1
CDS-3UTR TCA 90 bp ACTCTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTACAGCTCACTGAGCACTaGAGCTGGAATGGCACTAAT +
Preference number: 4 (lower is better)
Translates to: TLVFASDLVYTGECSSCVQLTEH*SWNGTN
Trigger: ATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTG...TACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp CTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATCTCAGGGAAAGCAACTaGGTCATACACGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVFASDLVYTGECSSCVDLRESN*VIHDSQ
Trigger: CTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAG...ATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR TCA 90 bp TTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCATCTAGTTTTTGCCAGTaGCCTAGTGTATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: FASDLVYTGECSSCVDGPSSFCQ*PSVYWG
Trigger: TCCCCAGTATACACTAGGTCACTGGCAAAAACTAGA...TGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp GTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGAATGGAACGATGGGTTTaGTCAGCTTGGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: VFASDLVYTGECSSCVDGMERWV*SAWKRL
Trigger: CAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCAT...TCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CCA 90 bp ACTCTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: TLVFASDLVYTGECSSCVMALIT*SASRLL
Trigger: CAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCAT...TACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR GCA 90 bp TTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAGTGTATACTGGGGAATaGAGTTCTTGTGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: FASDLVYTGECSSCVDGPVYTGE*SSCVDG
Trigger: TCCATCTACACAAGAACTGCATTCCCCAGTATACAC...TGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp CGCCACCCCCACCCTACTCTCCGCCGAGCTCCGGGGCTGTTCGCTTACAGCCCCGTCTGCGTAGTGGAGTaGAACCCTAGCACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RHPHPTLRRAPGLFAYSPVCVVE*NPSTRS
Trigger: GGAGCGGGTGCTAGGGTTCAACTCCACTACGCAGAC...GGGGCTGTAAGCGAACAGCCCCGGAGCTCGGCGGAGAGTAGGGTGGGGGTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS TCA 90 bp CCTCGCTATCGGCCCTCGCAGGGCTCGGGCGGCGGGCAGTACGCCTaGGTTCTGAGGTGCTCTGCTTGCCACACCTCTGTAGGCCAACAA +
Preference number: 5 (lower is better)
Translates to: PRYRPSQGSGGGQYA*VLRCSACHTSVGQQ
Trigger: TTGTTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACTGCCCGCCGCCCGAGCCCTGCGAGGGCCGATAGCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000468968.6
ENST00000470607.5
ENST00000479246.5
ENST00000495483.5
ENST00000497522.5
ENST00000539753.5
ENST00000544598.5
ENST00000651150.1
ENST00000652182.1
ENST00000652473.1
CDS TCA 90 bp CACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTGGGGTCCGCCCTCAGGTCCAAGGCG +
Preference number: 5 (lower is better)
Translates to: HEVTTGSSAQPRPGE*VLSLAVGSALRSKA
Trigger: CGCCTTGGACCTGAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470607.5
CDS CCA 90 bp AGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTaGCGAATGAGTGCTGAGTCTGGCTGTGGGGTCCGCCCTCAGGTC +
Preference number: 5 (lower is better)
Translates to: RPPRSDHWLQRSAKA*RMSAESGCGVRPQV
Trigger: GACCTGAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470607.5
CDS-3UTR CAA 90 bp GACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGCTGAGCTCACGGCTGTaGCCTGCAAACACTCCACGG +
Preference number: 5 (lower is better)
Translates to: DTAVMALRARARGAASAGLSSRL*PANTPR
Trigger: CCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAG...CCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS TCA 90 bp CCTGTTCTGGGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTaGATCCAAGCCAAGCTCAGAAACCAGGAGCAAGGTCCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PVLGSWVVSPDRQHF*IQAKLRNQEQGPGP
Trigger: GGGGCCCGGACCTTGCTCCTGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000470607.5
ENST00000652182.1
ENST00000652473.1
ENST00000652729.1
CDS TCA 90 bp TCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCAGCTCACTaGGCACTAGAGATCAGGCAGAGGCCTGACTCAGAAGGCATTCCC +
Preference number: 5 (lower is better)
Translates to: SGHEPEGQPQQGAAH*ALEIRQRPDSEGIP
Trigger: GGGAATGCCTTCTGAGTCAGGCCTCTGCCTGATCTCTAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541818.1
CDS CCA 90 bp TCATTACACTCCAGGGGTTCCCCTACCTTCCAGCGCCCTTCTGCCTaGAGGCTGAGCCCACAGACCGGCTGGCCTCTGAGAACACTGACC +
Preference number: 5 (lower is better)
Translates to: SLHSRGSPTFQRPSA*RLSPQTGWPLRTLT
Trigger: GGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTAGGGGAACCCCTGGAGTGTAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462977.1
ENST00000494216.1
CDS-3UTR CAA 90 bp ACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCACTGAGCTCACGGCTGTaGCCTGCAAACACTCCACGG +
Preference number: 5 (lower is better)
Translates to: TDTAVMALRARARGAASALSSRL*PANTPR
Trigger: CCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAG...TGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS GCA 90 bp GCAGGGCTCGGGCGGCGGGCAGTACGCCTGAGTTCTGAGGTGCTCTaGTTGCCACACCTCTGTAGGCCAACAAGTGCTTCAAATCCGCTA +
Preference number: 5 (lower is better)
Translates to: AGLGRRAVRLSSEVL*LPHLCRPTSASNPL
Trigger: TAGCGGATTTGAAGCACTTGTTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACTGCCCGCCGCCCGAGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000470607.5
ENST00000479246.5
ENST00000497522.5
ENST00000539753.5
ENST00000651150.1
ENST00000652182.1
ENST00000652473.1
CDS CCA 90 bp AGGGAGCTCTGCAGCTGGTTTAGGAGGGAAGAGGTTTGGGGCCTCTaGGCAAGTGTCACCTCAGGTCCAAGGCGGCGCTGGGCAAAACTG +
Preference number: 5 (lower is better)
Translates to: RELCSWFRREEVWGL*ASVTSGPRRRWAKL
Trigger: CAGTTTTGCCCAGCGCCGCCTTGGACCTGAGGTGACACTTGCCCAGAGGCCCCAAACCTCTTCCCTCCTAAACCAGCTGCAGAGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490768.1
CDS TCA 90 bp CCTGTTCTGGGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTaGATCCAAGCCAAGCTCAGAAACCTGCTCTCCACATGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: PVLGSWVVSPDRQHF*IQAKLRNLLSTCPQ
Trigger: CTGAGGGCATGTGGAGAGCAGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000468968.6
ENST00000479246.5
ENST00000490768.1
ENST00000495483.5
CDS TCA 90 bp CCTGTTCTGGGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTaGATCCAAGCCAAGCTCAGAAACCTGCTCTCCACATGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PVLGSWVVSPDRQHF*IQAKLRNLLSTCPG
Trigger: TCCTGGGCATGTGGAGAGCAGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651150.1
CDS-3UTR CAA 90 bp ACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTCTGTCTCATCAGGCTCTTaGCCCCGGGGCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: TWSASRLLSLRDTFQRPSVSSGS*PRGLVS
Trigger: GCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGAC...AGAAGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp ACATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTCTGAGCTCACGGCTGTaGCCTGCAAACACTCCACGG +
Preference number: 5 (lower is better)
Translates to: TSLDLHEVTTGSSAQPRPLSSRL*PANTPR
Trigger: CCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAG...AGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CAA 90 bp ACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGGGCAGCCTCAGCAGGGAGCTGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: TAVMALRARARGAASAGSWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...GCTCCCTGCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp CAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCCTGAGCTCACGGCTGTaGCCTGCAAACACTCCACGG +
Preference number: 5 (lower is better)
Translates to: QWLGISFSPNCVAAASWALSSRL*PANTPR
Trigger: CCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAG...GGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp ATTCACCACAGCTACAGACACTGCAGTGATGGCACTCAGGGCACGAGCCAGAGGCCGGGCGGGCTCACGTaGCTAGTAGGTAGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: IHHSYRHCSDGTQGTSQRPGGLT*LVGRAK
Trigger: TTTTGCCCTACCTACTAGCAACGTGAGCCCGCCCGG...CCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CAA 90 bp AGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCGTCTCATCAGGCTCTTaGCCCCGGGGCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SSSLSTEAGMALITWSASVSSGS*PRGLVS
Trigger: GCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGAC...GGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp GGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCGTCTCATCAGGCTCTTaGCCCCGGGGCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: GMALITWSASRLLSLRDTVSSGS*PRGLVS
Trigger: GCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGAC...GGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470607.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp CCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAGCTTGGAAGAGACTGAGCTCACGGCTGTaGCCTGCAAACACTCCACGG +
Preference number: 5 (lower is better)
Translates to: PSSRPSNMERWVCSAWKRLSSRL*PANTPR
Trigger: CCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAG...TCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CAA 90 bp ATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGTATGGAACGATGGGTTaGCTCAGCTTGGAAGAGACT +
Preference number: 5 (lower is better)
Translates to: ISRPPRSDHWLQRSAKAWYGTMG*LSLEET
Trigger: AGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATA...CCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CAA 90 bp AGCAGCTCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGGCAGATGGGCTCCTaGGTACTGCAGATTCACCAC +
Preference number: 5 (lower is better)
Translates to: SSSLSTEAGMALITWSASRQMGS*VLQIHH
Trigger: GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCT...GGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp GGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAAGGCAGATGGGCTCCTaGGTACTGCAGATTCACCAC +
Preference number: 5 (lower is better)
Translates to: GECSSCVDGPSSGSASPSRQMGS*VLQIHH
Trigger: GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCT...TGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp CCTGAGGCAACATCTCTAGACCTCCACGAAGTGACCACTGGCTCCAGCGCTCAGCACTTCAACTGGTTCTaGGTCTTGTGTAGATGGACC +
Preference number: 5 (lower is better)
Translates to: PEATSLDLHEVTTGSSAQHFNWF*VLCRWT
Trigger: GGTCCATCTACACAAGACCAAGAACCAGTTGAAGTG...CTGAGCGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS GCA 90 bp CCCCGGACAGGCAGCACTTCTGAATCCAAGCCAAGCTCAGAAACCTaGTCTCCACATGCCCTCAGAAGAGGAGAAACTAAGGGAAGATCT +
Preference number: 5 (lower is better)
Translates to: PRTGSTSESKPSSET*SPHALRRGETKGRS
Trigger: AGATCTTCCCTTAGTTTCTCCTCTTCTGAGGGCATGTGGAGAGCAGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468968.6
ENST00000479246.5
ENST00000490768.1
CDS-3UTR CAA 90 bp AGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGTCTCATCAGGCTCTTaGCCCCGGGGCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SDLVYTGECSSCVDGPSSVSSGS*PRGLVS
Trigger: GCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGAC...ACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp GCCTCCAGTGTCTGTAACCAGGAACCTCCCAGCATCACAGTCACTCTGAGGCCATATGGAACGATGGGTTaGCTCAGCTTGGAAGAGACT +
Preference number: 5 (lower is better)
Translates to: ASSVCNQEPPSITVTLRPYGTMG*LSLEET
Trigger: AGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATA...TGGCCTCAGAGTGACTGTGATGCTGGGAGGTTCCTGGTTACAGACACTGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp GAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCAGGCAGATGGGCTCCTaGGTACTGCAGATTCACCAC +
Preference number: 5 (lower is better)
Translates to: ECSSCVDGPSSGSASPSVRQMGS*VLQIHH
Trigger: GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCT...GACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp CAGTGGCTCGGCATCTCCTTCAGTCCTAATTGTGTAGCAGCTGCTTCCTGGGCCAACTGGTTCTTGGTCTaGTGTAGATGGACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: QWLGISFSPNCVAAASWANWFLV*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGACCAAGAACCAGTT...GGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CAA 90 bp GGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAATGGGTTTGCTCAGCTaGGAAGAGACTGGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: GECSSCVDGPSSGSASPSMGLLS*EETGKA
Trigger: TGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCAT...TGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp ATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCTTCCAGCGCCCTTATGGAACGATGGGTTaGCTCAGCTTGGAAGAGACT +
Preference number: 5 (lower is better)
Translates to: ITWSASRLLSLRDTFQRPYGTMG*LSLEET
Trigger: AGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATA...AGGGCGCTGGAAGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp CAGGGAAAGCAACTGAGTCATACACGATTCCCAGGACTCCTGGATCTTCTGAAGAGGCAGATGGGCTCCTaGGTACTGCAGATTCACCAC +
Preference number: 5 (lower is better)
Translates to: QGKQLSHTRFPGLLDLLKRQMGS*VLQIHH
Trigger: GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCT...CTTCAGAAGATCCAGGAGTCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp TGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCTGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: WGMQFLCRWTKQWLGISFWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...GAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp CCCAGCAGCAGGCCCAGTAATATGGAACGATGGGTTTGCTCAGCTTGGAAGAGATGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: PSSRPSNMERWVCSAWKRWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...TCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGCCTGCTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CAA 90 bp GGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCGCCTGGGATAAAGGTTaGGGCATTCGAGAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: GMALITWSASRLLSLRDTAWDKG*GIRESE
Trigger: CTCACTCTCTCGAATGCCCAAACCTTTATCCCAGGC...GGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS TCA 90 bp ACTCTCAGTTTCCCAGGCACCCATGTGGCCGGGGAGACTGTGTACTaGCCCAGGATGAAGAGATTGGGTGACTATGTAGACTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: TLSFPGTHVAGETVY*PRMKRLGDYVDFTK
Trigger: TTTTGTGAAGTCTACATAGTCACCCAATCTCTTCATCCTGGGTCAGTACACAGTCTCCCCGGCCACATGGGTGCCTGGGAAACTGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462977.1
ENST00000494216.1
ENST00000541818.1
CDS CCA 90 bp GCACCAAATGTCCAAATCCCTGAAGCTGGAATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACCAGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: APNVQIPEAGMALIT*SASRLLSLRDTRSK
Trigger: CTTGCTCCTGGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGGGATTTGGACATTTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539753.5
CDS-3UTR CAA 90 bp CTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGTCTCATCAGGCTCTTaGCCCCGGGGCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LVFASDLVYTGECSSCVDVSSGS*PRGLVS
Trigger: GCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGAC...ATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp GGACTCCTGGATCTTCTGAAGATGGCACCAAATGTCCAAATCCCTGGACAGGCAATGGGTTTGCTCAGCTaGGAAGAGACTGGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: GLLDLLKMAPNVQIPGQAMGLLS*EETGKA
Trigger: TGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCAT...TGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495483.5
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp TGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGAATGGGTTTGCTCAGCTaGGAAGAGACTGGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: CCLAPTLYTVINSNSLIGMGLLS*EETGKA
Trigger: TGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCAT...TCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CAA 90 bp TGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGAGGCTATGGAACGATGGGTTaGCTCAGCTTGGAAGAGACT +
Preference number: 5 (lower is better)
Translates to: CLAPTLYTVINSNSLIGGYGTMG*LSLEET
Trigger: AGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATA...GCCTCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651150.1
ENST00000652473.1
CDS-3UTR CAA 90 bp TGCTGCCTGGCGCCCACTCTCTATACAGTCATTAACAGCAACTCCCTCATAGGATGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: CCLAPTLYTVINSNSLIGWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...TCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537829.1
ENST00000651150.1
ENST00000652100.1
ENST00000652473.1
CDS-3UTR CAA 90 bp TCACTGAGCACTGAAGCTGGAATGGCACTAATAACGTGGTCAGCCTCCAGACTGTGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: SLSTEAGMALITWSASRLWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...CAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp AGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTTTCCTGGGCCCGCTGTaGAAACAGCTCCTACAATGG +
Preference number: 5 (lower is better)
Translates to: SSCVDGPSSGSASPSVLIFLGPL*KQLLQW
Trigger: CCATTGTAGGAGCTGTTTCAACAGCGGGCCCAGGAA...AATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652100.1
CDS TCA 90 bp GATAGGGTTTGGGTTGGGGGACATTCCCACTGTGACGGATGGAAATaGAGGCCTTCACTCCCAATAATGAGTTTTGGGAATTATGAGGGG +
Preference number: 5 (lower is better)
Translates to: DRVWVGGHSHCDGWK*RPSLPIMSFGNYEG
Trigger: CCCCTCATAATTCCCAAAACTCATTATTGGGAGTGAAGGCCTTCATTTCCATCCGTCACAGTGGGAATGTCCCCCAACCCAAACCCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490768.1
CDS-3UTR CAA 90 bp AGTTCTTGTGTAGATGGACCAAGCAGTGGCTCGGCATCTCCTTCAGTCCTAATTATGGGTTTGCTCAGCTaGGAAGAGACTGGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: SSCVDGPSSGSASPSVLIMGLLS*EETGKA
Trigger: TGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCAT...AATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp TTTATTTTCATGAATGAGAGTTGGGGATCAGCTGTTAGGTTCTGTGCCCAGGACAGGCAGATGGGCTCCTaGGTACTGCAGATTCACCAC +
Preference number: 5 (lower is better)
Translates to: FIFMNESWGSAVRFCAQDRQMGS*VLQIHH
Trigger: GTGGTGAATCTGCAGTACCAAGGAGCCCATCTGCCT...GTCCTGGGCACAGAACCTAACAGCTGATCCCCAACTCTCATTCATGAAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537829.1
CDS-3UTR CAA 90 bp GGACTCCTGGATCTTCTGAAGATGGCACCAAATGTCCAAATCCCTGGACAGGCACTGCGTAAGGAACAATaGATACTAAGTGGCACTAGG +
Preference number: 5 (lower is better)
Translates to: GLLDLLKMAPNVQIPGQALRKEQ*ILSGTR
Trigger: CCTAGTGCCACTTAGTATCAATTGTTCCTTACGCAG...TGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495483.5
CDS-3UTR CAA 90 bp AGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATGGACCAAGCAGTTGGGGAATGCAGTTCTaGTGTAGATGGACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: SDLVYTGECSSCVDGPSSWGMQF*CRWTKQ
Trigger: CTGCTTGGTCCATCTACACAAGAACTGCATTCCCCA...ACTGCTTGGTCCATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000539753.5
ENST00000650741.1
ENST00000651150.1
ENST00000652100.1
ENST00000652297.1
ENST00000652473.1
CDS-3UTR CAA 90 bp CTAGTTTTTGCCAGTGACCTAGTGTATACTGGGGAATGCAGTTCTTGTGTAGATTATGGAACGATGGGTTaGCTCAGCTTGGAAGAGACT +
Preference number: 5 (lower is better)
Translates to: LVFASDLVYTGECSSCVDYGTMG*LSLEET
Trigger: AGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATA...ATCTACACAAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000650741.1
ENST00000651150.1
ENST00000652297.1
ENST00000652473.1
CDS TCA 72 bp GGGCCCGGCTCAGGTGGTAACTGGCGGCCAAGCCGCTaGTGCCTCCGCCCAGCACGACCACGGTCCGGCCCA +
Preference number: 6 (lower is better)
Translates to: GPGSGGNWRPSR*CLRPARPRSGP
Trigger: TGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000462866.5
ENST00000468968.6
ENST00000470607.5
ENST00000479246.5
ENST00000490768.1
ENST00000495483.5
ENST00000497522.5
ENST00000535223.5
ENST00000539753.5
ENST00000544598.5
ENST00000651150.1
ENST00000652182.1
ENST00000652473.1
ENST00000652729.1
CDS CCA 72 bp GGTCCGGCCCATGCGGAAACCCCGCCGGCGCTCTGCTaGGTGCAGATAAGGGCCACACCCTCGCTATCGGCC +
Preference number: 6 (lower is better)
Translates to: GPAHAETPPALC*VQIRATPSLSA
Trigger: GGCCGATAGCGAGGGTGTGGCCCTTATCTGCACCCAGCAGAGCGCCGGCGGGGTTTCCGCATGGGCCGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352210.9
ENST00000495483.5
CDS GCA 72 bp CACGGTCCGGCCCATGCGGAAACCCCGCCGGCGCTCTaGTGGGTGCAGATAAGGGCCACACCCTCGCTATCG +
Preference number: 6 (lower is better)
Translates to: HGPAHAETPPAL*WVQIRATPSLS
Trigger: CGATAGCGAGGGTGTGGCCCTTATCTGCACCCAGCAGAGCGCCGGCGGGGTTTCCGCATGGGCCGGACCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352210.9
ENST00000495483.5
CDS TCA 72 bp GCTCCAGCGCTCAGCCAAGGCCTGGCGAATGAGTGCTaGGTCTGGCTGTGGGGTCCGCCCTCAGGTCCAAGG +
Preference number: 6 (lower is better)
Translates to: APALSQGLANEC*VWLWGPPSGPR
Trigger: CCTTGGACCTGAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470607.5
CDS TCA 72 bp ACCACTGGCTCCAGCGCTCAGCCAAGGCCTGGCGAATaGGTGCTGAGTCTGGCTGTGGGGTCCGCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: TTGSSAQPRPGE*VLSLAVGSALR
Trigger: CCTGAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470607.5
CDS CCA 72 bp TCCAGGGGTTCCCCTACCTTCCAGCGCCCTTCTGCCTaGAGGCTGAGCCCACAGACCGGCTGGCCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: SRGSPTFQRPSA*RLSPQTGWPLR
Trigger: TCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTAGGGGAACCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462977.1
ENST00000494216.1
CDS CCA 72 bp TGGCTGTGGGGTCCGCCCTCAGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTCTCATCAGGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: WLWGPPSGPRRR*AKLCTVSSGSL
Trigger: CAAAGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACCTGAGGGCGGACCCCACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470607.5
CDS CCA 72 bp TGCAGCTGGTTTAGGAGGGAAGAGGTTTGGGGCCTCTaGGCAAGTGTCACCTCAGGTCCAAGGCGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: CSWFRREEVWGL*ASVTSGPRRRW
Trigger: CCAGCGCCGCCTTGGACCTGAGGTGACACTTGCCCAGAGGCCCCAAACCTCTTCCCTCCTAAACCAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490768.1
CDS CCA 72 bp TGTTGCCTGCAAACACTCCACGGCAGAGACTGTCCATaGCTAGAGACGCCACCAGGAGCAAGGTCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: CCLQTLHGRDCP*LETPPGARSGP
Trigger: GGGCCCGGACCTTGCTCCTGGTGGCGTCTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652103.1
CDS CAA 90 bp GGGCTCGGGCGGCGGGCAGTACGCCTGAGTTCTGAGGTGCTCTGCTaGCCACACCTCTGTAGGCCAACAAGTGCTTCAAATCCGCTACTC +
Preference number: 6 (lower is better)
Translates to: GLGRRAVRLSSEVLC*PHLCRPTSASNPLL
Trigger: GAGTAGCGGATTTGAAGCACTTGTTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACTGCCCGCCGCCCGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000470607.5
ENST00000479246.5
ENST00000497522.5
ENST00000539753.5
ENST00000651150.1
ENST00000652182.1
CDS TCA 72 bp GAGCCAGAGGGGCAGCCTCAGCAGGGAGCAGCTCACTaGGCACTAGAGATCAGGCAGAGGCCTGACTCAGAA +
Preference number: 6 (lower is better)
Translates to: EPEGQPQQGAAH*ALEIRQRPDSE
Trigger: TTCTGAGTCAGGCCTCTGCCTGATCTCTAGTGCTCAGTGAGCTGCTCCCTGCTGAGGCTGCCCCTCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541818.1
CDS GCA 72 bp GGGCGGCGGGCAGTACGCCTGAGTTCTGAGGTGCTCTaGTTGCCACACCTCTGTAGGCCAACAAGTGCTTCA +
Preference number: 6 (lower is better)
Translates to: GRRAVRLSSEVL*LPHLCRPTSAS
Trigger: TGAAGCACTTGTTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACTGCCCGCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000470607.5
ENST00000479246.5
ENST00000497522.5
ENST00000539753.5
ENST00000544598.5
ENST00000651150.1
ENST00000652182.1
ENST00000652473.1
CDS GCA 72 bp GGCAGCACTTCTGAATCCAAGCCAAGCTCAGAAACCTaGTCTCCACATGCCCAGGAGCAAGGTCCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GSTSESKPSSET*SPHAQEQGPGP
Trigger: GGGGCCCGGACCTTGCTCCTGGGCATGTGGAGAGCAGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651150.1
CDS CCA 72 bp ACCAAATGTCCAAATCCCTTCCAGCGCCCTTCTGCCTaGAGGCTGAGCCCACAGACCGGCTGGCCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: TKCPNPFQRPSA*RLSPQTGWPLR
Trigger: TCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGGATTTGGACATTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537523.5
CDS TCA 72 bp GGCAGCTGGGTGGTCTCCCCGGACAGGCAGCACTTCTaGATCCAAGCCAAGCTCAGAAACCAGGAGCAAGGT +
Preference number: 6 (lower is better)
Translates to: GSWVVSPDRQHF*IQAKLRNQEQG
Trigger: ACCTTGCTCCTGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000470607.5
ENST00000652182.1
ENST00000652473.1
ENST00000652729.1
CDS CCA 72 bp ATGGCTAGAGACGCCACCTCAGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTCTCATCAGGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: MARDATSGPRRR*AKLCTVSSGSL
Trigger: CAAAGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACCTGAGGTGGCGTCTCTAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000479246.5
ENST00000652182.1
CDS CCA 72 bp CTCTGGGCAAGTGTCACCTCAGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTCTCATCAGGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LWASVTSGPRRR*AKLCTVSSGSL
Trigger: CAAAGAGCCTGATGAGACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACCTGAGGTGACACTTGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490768.1
CDS CAA 72 bp CGGCGGGCAGTACGCCTGAGTTCTGAGGTGCTCTGCTaGCCACACCTCTGTAGGCCAACAAGTGCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: RRAVRLSSEVLC*PHLCRPTSASN
Trigger: ATTTGAAGCACTTGTTGGCCTACAGAGGTGTGGCAAGCAGAGCACCTCAGAACTCAGGCGTACTGCCCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000352210.9
ENST00000367999.9
ENST00000470607.5
ENST00000479246.5
ENST00000497522.5
ENST00000539753.5
ENST00000544598.5
ENST00000651150.1
ENST00000652182.1
ENST00000652473.1
CDS TCA 72 bp TTCCCAGGCACCCATGTGGCCGGGGAGACTGTGTACTaGCCCAGGATGAAGAGATTGGGTGACTATGTAGAC +
Preference number: 6 (lower is better)
Translates to: FPGTHVAGETVY*PRMKRLGDYVD
Trigger: GTCTACATAGTCACCCAATCTCTTCATCCTGGGTCAGTACACAGTCTCCCCGGCCACATGGGTGCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462977.1
ENST00000494216.1
ENST00000541818.1
CDS CAA 90 bp CACAGCCCCTATTTGGTAGGGAATGAGGGTGGGATAGGGTTTGGGTaGGGGGACATTCCCACTGTGACGGATGGAAATGAAGGCCTTCAC +
Preference number: 6 (lower is better)
Translates to: HSPYLVGNEGGIGFG*GDIPTVTDGNEGLH
Trigger: GTGAAGGCCTTCATTTCCATCCGTCACAGTGGGAATGTCCCCCAACCCAAACCCTATCCCACCCTCATTCCCTACCAAATAGGGGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462977.1
ENST00000490768.1
CDS TCA 72 bp AGCAGCTCACTGAGCACTAGAGATCAGGCAGAGGCCTaGCTCAGAAGGCATTCCCATTACAGTTGTCAGTCC +
Preference number: 6 (lower is better)
Translates to: SSSLSTRDQAEA*LRRHSHYSCQS
Trigger: GGACTGACAACTGTAATGGGAATGCCTTCTGAGTCAGGCCTCTGCCTGATCTCTAGTGCTCAGTGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541818.1
CDS GCA 72 bp GGCAGCACTTCTGAATCCAAGCCAAGCTCAGAAACCTaGTCTCCACATGCCCTCAGAAGAGGAGAAACTAAG +
Preference number: 6 (lower is better)
Translates to: GSTSESKPSSET*SPHALRRGETK
Trigger: CTTAGTTTCTCCTCTTCTGAGGGCATGTGGAGAGCAGGTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468968.6
ENST00000479246.5
ENST00000490768.1
CDS CCA 72 bp GTCCAAATCCCTGAAGCTGGAATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACC +
Preference number: 6 (lower is better)
Translates to: VQIPEAGMALIT*SASRLLSLRDT
Trigger: GGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGGGATTTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539753.5
CDS CAA 72 bp TATTTGGTAGGGAATGAGGGTGGGATAGGGTTTGGGTaGGGGGACATTCCCACTGTGACGGATGGAAATGAA +
Preference number: 6 (lower is better)
Translates to: YLVGNEGGIGFG*GDIPTVTDGNE
Trigger: TTCATTTCCATCCGTCACAGTGGGAATGTCCCCCAACCCAAACCCTATCCCACCCTCATTCCCTACCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462977.1
ENST00000490768.1
CDS TCA 72 bp TGGGTTGGGGGACATTCCCACTGTGACGGATGGAAATaGAGGCCTTCACTCCCAATAATGAGTTTTGGGAAT +
Preference number: 6 (lower is better)
Translates to: WVGGHSHCDGWK*RPSLPIMSFGN
Trigger: ATTCCCAAAACTCATTATTGGGAGTGAAGGCCTTCATTTCCATCCGTCACAGTGGGAATGTCCCCCAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462977.1
ENST00000490768.1
CDS CCA 72 bp ATTCCATTACCTGAAGCTGGAATGGCACTAATAACGTaGTCAGCCTCCAGACTGCTGTCCCTTAGAGATACC +
Preference number: 6 (lower is better)
Translates to: IPLPEAGMALIT*SASRLLSLRDT
Trigger: GGTATCTCTAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGGTAATGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462977.1
ENST00000541818.1
CDS CCA 72 bp GGATCTTCTGAAGATGGCACCAAATGTCCAAATCCCTaGAGAGAAGGACATTCATGCGTCAGAAGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: GSSEDGTKCPNP*REGHSCVRRKG
Trigger: CCCTTTCCTTCTGACGCATGAATGTCCTTCTCTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466452.1
CDS CAA 72 bp CTCAGAAGGCATTCCCATTACAGTTGTCAGTCCTCTTaGGGATTAGACTCCCATAGAGATGACCAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LRRHSHYSCQSS*GLDSHRDDQFR
Trigger: CCTGAACTGGTCATCTCTATGGGAGTCTAATCCCAAAGAGGACTGACAACTGTAATGGGAATGCCTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541818.1