RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPME1 (Homo sapiens)

Ensembl gene IDs: ENSG00000214517

Ensembl transcript IDs: ENST00000328257.13, ENST00000398427.6, ENST00000535205.5, ENST00000538501.5, ENST00000539021.1, ENST00000541340.5, ENST00000542710.3, ENST00000543525.3, ENST00000544401.2

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTGCTCTGTGGCAGGTGAGGGCGCAGGAGGCCCCTGGAGCAGCCTaGCCTCAGCCCAGGGCAGGTGCCCAGACATGTGGGAGTGGGACA +
Preference number: 1 (lower is better)
Translates to: VALWQVRAQEAPGAA*PQPRAGAQTCGSGT
Trigger: TGTCCCACTCCCACATGTCTGGGCACCTGCCCTGGGCTGAGGCCAGGCTGCTCCAGGGGCCTCCTGCGCCCTCACCTGCCACAGAGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp GGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATaGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTAT +
Preference number: 1 (lower is better)
Translates to: GVPVYREPVSHGWAG*RGDSGITVASGATY
Trigger: ATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp GTTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATaGCTGGGCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTC +
Preference number: 1 (lower is better)
Translates to: VGTSRGARLPGASVT*LGGMERRQWHHSGL
Trigger: GAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp GGGCTTCAGGACACTGCCCCTTCCTGCCCTTGGAAATGGCGTGCCTaGGCAATAGGGACAGGCCACAGTGCTGTGTCGAGGCAGCTGGAA +
Preference number: 1 (lower is better)
Translates to: GLQDTAPSCPWKWRA*AIGTGHSAVSRQLE
Trigger: TTCCAGCTGCCTCGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCAGGAAGGGGCAGTGTCCTGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR GCA 90 bp CTGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTaGTGTGTCGAGGCAGCTGGAAGAAGGCAAAGACTGGGGATGCCA +
Preference number: 1 (lower is better)
Translates to: LPLEMACLGNRDRPQ*CVEAAGRRQRLGMP
Trigger: TGGCATCCCCAGTCTTTGCCTTCTTCCAGCTGCCTCGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp TGGCTGGGCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTaGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTGG +
Preference number: 1 (lower is better)
Translates to: WLGGMERRQWHHSGL*CDVFTTELDVEEGW
Trigger: CCACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGCCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR TCA 90 bp TGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTaGTTTTCAGGCTCGTTTCTTGTGATGCTATCCACCACCACCGCT +
Preference number: 1 (lower is better)
Translates to: WALPDGRPCAWTGWT*FSGSFLVMLSTTTA
Trigger: AGCGGTGGTGGTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR GCA 90 bp CTGGGCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTaGGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTGGACA +
Preference number: 1 (lower is better)
Translates to: LGGMERRQWHHSGLW*DVFTTELDVEEGWT
Trigger: TGTCCACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp CAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTaGAAAGGTGGAGGGGGCTACACATCACCTAAGACAGTCACAGAA +
Preference number: 1 (lower is better)
Translates to: QTPDHAAGQGWEVVE*KGGGGYTSPKTVTE
Trigger: TTCTGTGACTGTCTTAGGTGATGTGTAGCCCCCTCCACCTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp GATGTATCGCCTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTaGAGGCTTTACCCTAGGCAACGCAGGGAGAGCAGGCAGGAGCTA +
Preference number: 1 (lower is better)
Translates to: DVSPDARKRGSVWQI*RLYPRQRRESRQEL
Trigger: TAGCTCCTGCCTGCTCTCCCTGCGTTGCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAGGCGATACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR TCA 90 bp CATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTaGTGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATC +
Preference number: 1 (lower is better)
Translates to: HVLGPAGPDFQARFL*CYPPPPLAMAKDGI
Trigger: GATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR GCA 90 bp ACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTaGCCCTTCCTGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGAC +
Preference number: 1 (lower is better)
Translates to: THHLRQSQKRWASGH*PFLPLEMACLGNRD
Trigger: GTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCAGGAAGGGGCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp CACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCTaGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTAC +
Preference number: 1 (lower is better)
Translates to: HHHRSLWLRMGSWPL*VFQTWKSTTGIKRY
Trigger: GTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTaGCCTCTCTGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATA +
Preference number: 1 (lower is better)
Translates to: DAIHHHRSLWLRMGS*PLWVFQTWKSTTGI
Trigger: TATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp TTCAGGCTCGTTTCTTGTGATGCTATCCACCACCACCGCTCGCTATaGCTAAGGATGGGATCTTGGCCTCTCTGGGTCTTCCAAACCTGG +
Preference number: 1 (lower is better)
Translates to: FRLVSCDAIHHHRSL*LRMGSWPLWVFQTW
Trigger: CCAGGTTTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATCACAAGAAACGAGCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp TTGAACTCAGATGTATCGCCTGATGCTAGGAAGAGGGGCTCAGTATaGCAAATCTGGAGGCTTTACCCTAGGCAACGCAGGGAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: LNSDVSPDARKRGSV*QIWRLYPRQRRESR
Trigger: CCTGCTCTCCCTGCGTTGCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAGGCGATACATCTGAGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp AAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTaGGCCATGCCAAGACAATCTCAAGGAATGGAGGTCCCTGAGCCT +
Preference number: 1 (lower is better)
Translates to: KIKTTPCIVHPMRQG*AMPRQSQGMEVPEP
Trigger: AGGCTCAGGGACCTCCATTCCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 90 bp CTATGGCTAAGGATGGGATCTTGGCCTCTCTGGGTCTTCCAAACCTaGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTGTTTTA +
Preference number: 1 (lower is better)
Translates to: LWLRMGSWPLWVFQT*KSTTGIKRYLTSVL
Trigger: TAAAACACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR TCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATAACAGAGCTCGATGTTaGGGAGGGGTGGACAGCAGG +
Preference number: 2 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDNRARC*GGVDSR
Trigger: CCTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTT...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR TCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGGCATTGTCCATCCCATaGGGCAGGGCTGGGCCATGC +
Preference number: 2 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKALSIP*GRAGPC
Trigger: GCATGGCCCAGCCCTGCCTCATGGGATGGACAATGC...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGTCAGCCCAGGGCAGGTaGCCAGACATGTGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKSAQGR*PDMWEW
Trigger: CCACTCCCACATGTCTGGGCACCTGCCCTGGGCTGA...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTTGGTACATCTCGGGGTaGCCGTCTACCGGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVWYISG*PSTGSQ
Trigger: CTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCA...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp TGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTGCTGTGTCGGAGGCAAGGGGGCACTaGACACCTCCAGGAACCAGT +
Preference number: 2 (lower is better)
Translates to: CPWKWRAWAIGTGHSAVSEARGH*TPPGTS
Trigger: ACTGGTTCCTGGAGGTGTGCAGTGCCCCCTTGCCTC...CGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTAGGGACAGGCCACAGTaGTGTGTCGAGGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSRDRPQ*CVEAAG
Trigger: TCCAGCTGCCTCGACACAGCACTGTGGCCTGTCCCT...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTACCTGGGTTGCTCTGTaGCAGGTGAGGGCGCAGGAG +
Preference number: 2 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVTWVAL*QVRAQE
Trigger: CTCCTGCGCCCTCACCTGCCACAGAGCAACCCAGGT...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTTGGGCTTCAGGACACTaGCCCTTCCTGCCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSWASGH*PFLPLE
Trigger: TTCCAAGGGCAGGAAGGGGCAGTGTCCTGAAGCCCA...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGTGGGCTCTCCCAGATaGGAGGCCATGTGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVVGSPR*EAMCLD
Trigger: GTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCAC...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp ATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAATCTCAAGGGGAGCCAGTGTCACATaGCTGGGCGGGATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: MHCPSHEAGLGHAKTISRGASVT*LGGMER
Trigger: CCTCTCCATCCCGCCCAGCCATGTGACACTGGCTCC...CCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTTGGGGAAGCCGATGTTaGTCAAGGGCCCTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIWGSRC*SRALEN
Trigger: GTTTTCCAGGGCCCTTGACCAACATCGGCTTCCCCA...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR TCA 90 bp TGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTGCTGTGTCGTGGACCGGCTGGACCTaGTTTTCAGGCTCGTTTCTT +
Preference number: 2 (lower is better)
Translates to: CPWKWRAWAIGTGHSAVSWTGWT*FSGSFL
Trigger: AAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCA...CGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTCTGTGTCGAGGCAGCTaGAAGAAGGCAAAGACTGGG +
Preference number: 2 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVLCRGS*KKAKTG
Trigger: CCCAGTCTTTGCCTTCTTCCAGCTGCCTCGACACAG...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR TCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTGCCTGGGAAGACATTTaGACTCAGATGTATCGCCTG +
Preference number: 2 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIAWEDI*TQMYRL
Trigger: CAGGCGATACATCTGAGTTCAAATGTCTTCCCAGGC...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGTGGTACATCTCGGGGTaGCCGTCTACCGGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWWYISG*PSTGSQ
Trigger: CTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCA...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGGGCAAAGACTGGGGATaGCAGGCTGTAATGTTTCTG +
Preference number: 2 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKGKDWG*QAVMFL
Trigger: CAGAAACATTACAGCCTGGCATCCCCAGTCTTTGCC...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCTGGGGAAGCCGATGTTaGTCAAGGGCCCTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLWGSRC*SRALEN
Trigger: GTTTTCCAGGGCCCTTGACCAACATCGGCTTCCCCA...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCGGAGCAGGGGAGCCCTaGACTGGGGAAGCCGATGTT +
Preference number: 2 (lower is better)
Translates to: GATHHLRQSQKRWASGHCGAGEP*TGEADV
Trigger: AACATCGGCTTCCCCAGTCCAGGGCTCCCCTGCTCC...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTCTAAGGATGGGATCTTaGCCTCTCTGGGTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSLRMGS*PLWVFQ
Trigger: TTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAG...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR TCA 90 bp CTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTGGAGGCTTTACCCTAGGCAACAGAGCTCGATGTTaGGGAGGGGTGGACAGCAGG +
Preference number: 2 (lower is better)
Translates to: LMLGRGAQYGKSGGFTLGNRARC*GGVDSR
Trigger: CCTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTT...GCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACACATCACAGTGGCCTCTaGTGCGACGTATTTACAACA +
Preference number: 2 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTHHSGL*CDVFTT
Trigger: TGTTGTAAATACGTCGCACCAGAGGCCACTGTGATG...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACCCAGTGTCACATGGCTaGGCGGGATGGAGAGGAGAC +
Preference number: 2 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHPVSHG*AGWRGD
Trigger: GTCTCCTCTCCATCCCGCCCAGCCATGTGACACTGG...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCGGAGCCAGTGTCACATaGCTGGGCGGGATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIGASVT*LGGMER
Trigger: CCTCTCCATCCCGCCCAGCCATGTGACACTGGCTCC...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGTTGGTCAAGGGCCCTaGAAAACAATGCTTTTGGCA +
Preference number: 2 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSVGQGP*KTMLLA
Trigger: TGCCAAAAGCATTGTTTTCCAGGGCCCTTGACCAAC...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTCTGGAAGAGTACGACTaGGATAAAACGGTACCTGAC +
Preference number: 2 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSLEEYD*DKTVPD
Trigger: GTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAG...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAGTGGGCTCTCCCAGATaGGAGGCCATGTGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAVGSPR*EAMCLD
Trigger: GTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCAC...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp ATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAATCTCAAGGACAGTGGCATCACAGTaGCCTCTGGTGCGACGTATT +
Preference number: 2 (lower is better)
Translates to: MHCPSHEAGLGHAKTISRTVASQ*PLVRRI
Trigger: AATACGTCGCACCAGAGGCCACTGTGATGCCACTGT...CCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGTGGAAATGGCGTGCCTaGGCAATAGGGACAGGCCAC +
Preference number: 2 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLWKWRA*AIGTGH
Trigger: GTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCA...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR TCA 90 bp TGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTGCTGTGTCGTGTTTCTGTGTGGAGTaGTGTGAAATCCACAAATGG +
Preference number: 2 (lower is better)
Translates to: CPWKWRAWAIGTGHSAVSCFCVE*CEIHKW
Trigger: CCATTTGTGGATTTCACATCACTCCACACAGAAACA...CGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACATGGAGAGGAGACAGTaGCATCACAGTGGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHMERRQ*HHSGLW
Trigger: CCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCAT...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR TCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTTTTTGGCAGAATACATaGAAAGGTTGGTACATCTCG +
Preference number: 2 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIFWQNT*KGWYIS
Trigger: CGAGATGTACCAACCTTTTCATGTATTCTGCCAAAA...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGACAGTGGCATCACAGTaGCCTCTGGTGCGACGTATT +
Preference number: 2 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWTVASQ*PLVRRI
Trigger: AATACGTCGCACCAGAGGCCACTGTGATGCCACTGT...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAGGATCTTGGCCTCTCTaGGTCTTCCAAACCTGGAAG +
Preference number: 2 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAGSWPL*VFQTWK
Trigger: CTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCC...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGCACAGTGGCCTCTGGTaGGACGTATTTACAACAGAG +
Preference number: 2 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWHSGLW*DVFTTE
Trigger: CTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR GCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCGGCAAAGACTGGGGATaGCAGGCTGTAATGTTTCTG +
Preference number: 2 (lower is better)
Translates to: GATHHLRQSQKRWASGHCGKDWG*QAVMFL
Trigger: CAGAAACATTACAGCCTGGCATCCCCAGTCTTTGCC...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CAA 90 bp CAAGACAATCTCAAGGAATGGAGGTCCCTGAGCCTGGGAAGACATTaGAACTCAGATGTATCGCCTGATGCTAGGAAGAGGGGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: QDNLKEWRSLSLGRH*NSDVSPDARKRGSV
Trigger: TACTGAGCCCCTCTTCCTAGCATCAGGCGATACATCTGAGTTCAAATGTCTTCCCAGGCTCAGGGACCTCCATTCCTTGAGATTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR TCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCGCCTGGGAAGACATTTaGACTCAGATGTATCGCCTG +
Preference number: 2 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIAWEDI*TQMYRL
Trigger: CAGGCGATACATCTGAGTTCAAATGTCTTCCCAGGC...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGGTTGGTCAAGGGCCCTaGAAAACAATGCTTTTGGCA +
Preference number: 2 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLVGQGP*KTMLLA
Trigger: TGCCAAAAGCATTGTTTTCCAGGGCCCTTGACCAAC...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAAAGAGGGGCTCAGTATaGCAAATCTGGAGGCTTTAC +
Preference number: 2 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAKRGSV*QIWRLY
Trigger: GTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTT...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGTGGGTCTTCCAAACCTaGAAGAGTACGACTGGGATA +
Preference number: 2 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLWVFQT*KSTTGI
Trigger: TATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGTCAGTATGGCAAATCTaGAGGCTTTACCCTAGGCAA +
Preference number: 2 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWSVWQI*RLYPRQ
Trigger: TTGCCTAGGGTAAAGCCTCCAGATTTGCCATACTGA...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCTGGAAGAGTACGACTaGGATAAAACGGTACCTGAC +
Preference number: 2 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAILEEYD*DKTVPD
Trigger: GTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAG...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCTGGGTCTTCCAAACCTaGAAGAGTACGACTGGGATA +
Preference number: 2 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIWVFQT*KSTTGI
Trigger: TATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CCA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTTCAGTATGGCAAATCTaGAGGCTTTACCCTAGGCAA +
Preference number: 2 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSSVWQI*RLYPRQ
Trigger: TTGCCTAGGGTAAAGCCTCCAGATTTGCCATACTGA...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp GACACTGCCCCTTCCTGCCCTTGGAAATGGCGTGCCTaGGCAATAGGGACAGGCCACAGTGCTGTGTCGAGG +
Preference number: 3 (lower is better)
Translates to: DTAPSCPWKWRA*AIGTGHSAVSR
Trigger: CCTCGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCAGGAAGGGGCAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR GCA 72 bp TCAGGACACTGCCCCTTCCTGCCCTTGGAAATGGCGTaGCTGGGCAATAGGGACAGGCCACAGTGCTGTGTC +
Preference number: 3 (lower is better)
Translates to: SGHCPFLPLEMA*LGNRDRPQCCV
Trigger: GACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCAGGAAGGGGCAGTGTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp CAGACATGTGGGAGTGGGACAGTGGGCTCTCCCAGATaGGAGGCCATGTGCTTGGACCGGCTGGACCTGATT +
Preference number: 3 (lower is better)
Translates to: QTCGSGTVGSPR*EAMCLDRLDLI
Trigger: AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGTCCCACTCCCACATGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp TTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTaGGTTGCTCTGTGGCAGGTGAGGGCGCAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: LACGFVHGLYLT*VALWQVRAQEA
Trigger: GGCCTCCTGCGCCCTCACCTGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CAA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAGAATACATGAAAAGGTaGGTACATCTCGGGGTGCCC +
Preference number: 3 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTEYMKR*VHLGVP
Trigger: GGGCACCCCGAGATGTACCAACCTTTTCATGTATTC...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CAA 90 bp ATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAATCTCAAGGCTGGGGAAGCCGATGTaGGTCAAGGGCCCTGGAAAA +
Preference number: 3 (lower is better)
Translates to: MHCPSHEAGLGHAKTISRLGKPM*VKGPGK
Trigger: TTTTCCAGGGCCCTTGACCAACATCGGCTTCCCCAG...CCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR GCA 72 bp CTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTaGCCCTTCCTGCCCTTGGAAATGGCGTGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LRQSQKRWASGH*PFLPLEMACLG
Trigger: GCCCAGGCACGCCATTTCCAAGGGCAGGAAGGGGCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp CCTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTaGAGGCTTTACCCTAGGCAACGCAGGGAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: PDARKRGSVWQI*RLYPRQRRESR
Trigger: CCTGCTCTCCCTGCGTTGCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp CACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTaGCCTCTCTGGGTCTTCCAAACCTGGAAGAGTACG +
Preference number: 3 (lower is better)
Translates to: HHHRSLWLRMGS*PLWVFQTWKST
Trigger: CGTACTCTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CAA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAATACATGAAAAGGTaGGTACATCTCGGGGTGCCC +
Preference number: 3 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVEYMKR*VHLGVP
Trigger: GGGCACCCCGAGATGTACCAACCTTTTCATGTATTC...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR TCA 72 bp GGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTaGTGCTATCCACCACCACCGCTCGCTATGGCTAAG +
Preference number: 3 (lower is better)
Translates to: GPAGPDFQARFL*CYPPPPLAMAK
Trigger: CTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR TCA 72 bp CCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTaGTTTTCAGGCTCGTTTCTTGTGATGCTATCCACC +
Preference number: 3 (lower is better)
Translates to: PDGRPCAWTGWT*FSGSFLVMLST
Trigger: GGTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp GGCAGGGCTGGGCCATGCCAAGACAATCTCAAGGAATaGAGGTCCCTGAGCCTGGGAAGACATTTGAACTCA +
Preference number: 3 (lower is better)
Translates to: GRAGPCQDNLKE*RSLSLGRHLNS
Trigger: TGAGTTCAAATGTCTTCCCAGGCTCAGGGACCTCCATTCCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp GGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTaGTGCGACGTATTTACAACAGAGCTCGATGTTGAG +
Preference number: 3 (lower is better)
Translates to: GMERRQWHHSGL*CDVFTTELDVE
Trigger: CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp GATGTATCGCCTGATGCTAGGAAGAGGGGCTCAGTATaGCAAATCTGGAGGCTTTACCCTAGGCAACGCAGG +
Preference number: 3 (lower is better)
Translates to: DVSPDARKRGSV*QIWRLYPRQRR
Trigger: CCTGCGTTGCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAGGCGATACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp CGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCTaGGTCTTCCAAACCTGGAAGAGTACGACTGGGATA +
Preference number: 3 (lower is better)
Translates to: RSLWLRMGSWPL*VFQTWKSTTGI
Trigger: TATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp GTTTCTTGTGATGCTATCCACCACCACCGCTCGCTATaGCTAAGGATGGGATCTTGGCCTCTCTGGGTCTTC +
Preference number: 3 (lower is better)
Translates to: VSCDAIHHHRSL*LRMGSWPLWVF
Trigger: GAAGACCCAGAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATCACAAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp AGTGCTGTGTCGAGGCAGCTGGAAGAAGGCAAAGACTaGGGATGCCAGGCTGTAATGTTTCTGTGTGGAGTG +
Preference number: 3 (lower is better)
Translates to: SAVSRQLEEGKD*GCQAVMFLCGV
Trigger: CACTCCACACAGAAACATTACAGCCTGGCATCCCCAGTCTTTGCCTTCTTCCAGCTGCCTCGACACAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CAA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCAACAGAGCTCGATGTaGAGGAGGGGTGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIQQSSM*RRGGQQ
Trigger: CTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTTG...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR GCA 72 bp ATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTaGGACGTATTTACAACAGAGCTCGATGTTGAGGAG +
Preference number: 3 (lower is better)
Translates to: MERRQWHHSGLW*DVFTTELDVEE
Trigger: CTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CAA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTCAACAGAGCTCGATGTaGAGGAGGGGTGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSQQSSM*RRGGQQ
Trigger: CTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTTG...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp AGGATGGGATCTTGGCCTCTCTGGGTCTTCCAAACCTaGAAGAGTACGACTGGGATAAAACGGTACCTGACT +
Preference number: 3 (lower is better)
Translates to: RMGSWPLWVFQT*KSTTGIKRYLT
Trigger: AGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR-3UTR CAA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGAGCCTGGGAAGACATTaGAACTCAGATGTATCGCCT +
Preference number: 3 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWSLGRH*NSDVSP
Trigger: AGGCGATACATCTGAGTTCAAATGTCTTCCCAGGCT...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CCA 72 bp AACAATTCCATAGGCTTTGGCCTGTGGCTTTGTGCATaGGCTGTATTTAACCTGGGTTGCTCTGTGGCAGGT +
Preference number: 3 (lower is better)
Translates to: NNSIGFGLWLCA*AVFNLGCSVAG
Trigger: ACCTGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAAGCCTATGGAATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAGGCGCAGGAGGCCCCTaGAGCAGCCTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTGAGGP*SSLASA
Trigger: GGCTGAGGCCAGGCTGCTCCAGGGGCCTCCTGCGCC...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTATCTTGGCTCCGCTCTaGCTGCCCCCGCTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIILAPL*LPPLPG
Trigger: ACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGAT...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTTCTGACTGCCCCCGCTaGCGGGTAGAGGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLISDCPR*RVEVGE
Trigger: CTCGCCCACCTCTACCCGGCAGCGGGGGCAGTCAGA...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGCCAGACTCCGGACCATaGAGCAGGACAGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWAPDSGP*SRTGVG
Trigger: TCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGG...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATGGCCCATTCGCATCTTaGCTCCGCTCTGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDGPFAS*LRSDCP
Trigger: GGGGCAGTCAGAGCGGAGCCAAGATGCGAATGGGCC...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGAGCAGGGGAGCCCTaGACTGGGGAAGCCGATGTT +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWAGAGEP*TGEADV
Trigger: AACATCGGCTTCCCCAGTCCAGGGCTCCCCTGCTCC...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAGGCGGCCGAGGTaGATGCTCTTTTCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSGRRPR*MLFSRA
Trigger: GGCCCTCGAAAAGAGCATGCACCTCGGCCGCCTTCC...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTTGGTACATCTCGGGGTaGCCGTCTACCGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIWYISG*PSTGSQ
Trigger: CTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCA...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGACGCCCTGTCGCCTTTaGACAGCACCCAGCTACCCG +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKTPCRL*TAPSYP
Trigger: CGGGTAGCTGGGTGCTGTCCAAAGGCGACAGGGCGT...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328257.13
CDS-3UTR CCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGGGCCCATTCGCATCTTaGCTCCGCTCTGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKGPFAS*LRSDCP
Trigger: GGGGCAGTCAGAGCGGAGCCAAGATGCGAATGGGCC...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAGCCAGTGTCACATaGCTGGGCGGGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSGASVT*LGGMER
Trigger: CCTCTCCATCCCGCCCAGCCATGTGACACTGGCTCC...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTGCTGTGTCGAGCTTCGTCCCACGTTaGGTGTGGCCCAACCGGTCA +
Preference number: 4 (lower is better)
Translates to: CPWKWRAWAIGTGHSAVSSFVPR*VWPNRS
Trigger: TGACCGGTTGGGCCACACTCAACGTGGGACGAAGCT...CGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp CACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGATCTTGGCTCCGCTCTaGCTGCCCCCGCTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: HSGLWCDVFTTELDVEEGILAPL*LPPLPG
Trigger: ACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGAT...CCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp CACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTGGCTCCGCTCTGACTaGCCCCGCTGCCGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: HSGLWCDVFTTELDVEEGWLRSD*PRCRVE
Trigger: CTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCA...CCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTAGATGGGAGGCCATGTaGTTGGACCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIRWEAM*LDRLDL
Trigger: CAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCT...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAGACACTGCCCCTTCCTaGCCTTGGAAATGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTDTAPS*PWKWRA
Trigger: GGCACGCCATTTCCAAGGGCAGGAAGGGGCAGTGTC...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATATGGAGAGGAGACAGTaGCATCACAGTGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDMERRQ*HHSGLW
Trigger: CCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCAT...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACACCAGACATGTGGGAGTaGGACAGTGGGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTPDMWE*DSGLSQ
Trigger: CTGGGAGAGCCCACTGTCCCACTCCCACATGTCTGG...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTCCAGACATGTGGGAGTaGGACAGTGGGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSPDMWE*DSGLSQ
Trigger: CTGGGAGAGCCCACTGTCCCACTCCCACATGTCTGG...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGAGGTGCCCAGACATGTaGGAGTGGGACAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKRCPDM*EWDSGL
Trigger: GAGCCCACTGTCCCACTCCCACATGTCTGGGCACCT...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAGGCGCAGGAGGCCCCTaGAGCAGCCTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAGAGGP*SSLASA
Trigger: GGCTGAGGCCAGGCTGCTCCAGGGGCCTCCTGCGCC...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGCTGTGTCGAGGCAGCTaGAAGAAGGCAAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWALCRGS*KKAKTG
Trigger: CCCAGTCTTTGCCTTCTTCCAGCTGCCTCGACACAG...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATTGGACCGGCTGGACCTaGTTTTCAGGCTCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDWTGWT*FSGSFL
Trigger: AAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCA...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATAATAAGAGCAAGTTCTaGGTCTCCGAGGGCAACCCC +
Preference number: 4 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDNKSKF*VSEGNP
Trigger: GGGGTTGCCCTCGGAGACTCAGAACTTGCTCTTATT...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398427.6
CDS-3UTR GCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCGGCGGCCGAGGTGCATaGTCTTTTCGAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLGGRGA*SFRGPT
Trigger: TGTCGGCCCTCGAAAAGAGCATGCACCTCGGCCGCC...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGTCTGACTGCCCCCGCTaGCGGGTAGAGGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: WRGDSGITVASGATYLQQSDCPR*RVEVGE
Trigger: CTCGCCCACCTCTACCCGGCAGCGGGGGCAGTCAGA...CTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCTCAGCCCAGGGCAGGTaGCCAGACATGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLSAQGR*PDMWEW
Trigger: CCACTCCCACATGTCTGGGCACCTGCCCTGGGCTGA...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTACTGCATGGCCACACTaGGGTAGGACCTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSTAWPH*GRTCIW
Trigger: CCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGT...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGTCCTCATGGACTGCATaGCCACACTGGGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKSSWTA*PHWGRT
Trigger: GGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGA...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGACAGTGGCATCACAGTaGCCTCTGGTGCGACGTATT +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWATVASQ*PLVRRI
Trigger: AATACGTCGCACCAGAGGCCACTGTGATGCCACTGT...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTGCTGTGTCGCAGGCTCGTTTCTTGTaGTGCTATCCACCACCACCG +
Preference number: 4 (lower is better)
Translates to: CPWKWRAWAIGTGHSAVSQARFL*CYPPPP
Trigger: CGGTGGTGGTGGATAGCATCACAAGAAACGAGCCTG...CGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAACATCGAGGGGAGGCTaGACGCACGTAGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTTSRGG*THVVKQ
Trigger: CTGTTTGACTACGTGCGTGCAGCCTCCCCTCGATGT...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGTGGCTCCGCTCTGACTaGCCCCGCTGCCGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLWLRSD*PRCRVE
Trigger: CTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCA...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGTCCACCGATGGGTTCTaGAAACCTGTGCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKSTDGF*KPVPDQ
Trigger: CTGATCCGGCACAGGTTTGCAGAACCCATCGGTGGA...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCAGGGACAGGCCACAGTaGTGTGTCGAGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLRDRPQ*CVEAAG
Trigger: TCCAGCTGCCTCGACACAGCACTGTGGCCTGTCCCT...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACCAGTGTCACATGGCTaGGCGGGATGGAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: AGWRGDSGITVASGATYLPVSHG*AGWRGD
Trigger: GTCTCCTCTCCATCCCGCCCAGCCATGTGACACTGG...TAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTCACCACCGCTCGCTATaGCTAAGGATGGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIHHRSL*LRMGSW
Trigger: CCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTG...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGATAGGCTTTGGCCTGTaGCTTTGTGCATGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWAIGFGL*LCAWAV
Trigger: TACAGCCCATGCACAAAGCCACAGGCCAAAGCCTAT...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATATAGGCTTTGGCCTGTaGCTTTGTGCATGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDIGFGL*LCAWAV
Trigger: TACAGCCCATGCACAAAGCCACAGGCCAAAGCCTAT...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATGAAGAAGGCAAAGACTaGGGATGCCAGGCTGTAATG +
Preference number: 4 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDEEGKD*GCQAVM
Trigger: CATTACAGCCTGGCATCCCCAGTCTTTGCCTTCTTC...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTCTGTGTCGAGGCAGCTaGAAGAAGGCAAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSLCRGS*KKAKTG
Trigger: CCCAGTCTTTGCCTTCTTCCAGCTGCCTCGACACAG...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTTGGAAATGGCGTGCCTaGGCAATAGGGACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVWKWRA*AIGTGH
Trigger: GTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCA...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGTGGGAGGTTGTTGAGTaGAAAGGTGGAGGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKWEVVE*KGGGGY
Trigger: GTAGCCCCCTCCACCTTTCCACTCAACAACCTCCCA...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCAACAGAGCTCGATGTTaGGGAGGGGTGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLNRARC*GGVDSR
Trigger: CCTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTT...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTGCATTGTCCATCCCATaGGGCAGGGCTGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGALSIP*GRAGPC
Trigger: GCATGGCCCAGCCCTGCCTCATGGGATGGACAATGC...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTTGGACCGGCTGGACCTaGTTTTCAGGCTCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSWTGWT*FSGSFL
Trigger: AAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCA...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGGGCGGCCGAGGTGCATaGTCTTTTCGAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: WRGDSGITVASGATYLQQGGRGA*SFRGPT
Trigger: TGTCGGCCCTCGAAAAGAGCATGCACCTCGGCCGCC...CTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGATCTGGAACTTCCCTTaGATCTGGCCAATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWAIWNFP*IWPMVR
Trigger: TCTGACCATTGGCCAGATGCAAGGGAAGTTCCAGAT...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGTTCTGCAAACCTGTaGCGGATCAGGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSGSANL*RIRKVA
Trigger: TGCCACTTTCCTGATCCGGCACAGGTTTGCAGAACC...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGGTATTTAACCTGGGTTaGTCTGTGGCAGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKVFNLG*SVAGEG
Trigger: GCCCTCACCTGCCACAGAGCAACCCAGGTTAAATAC...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCTGGGCTTCAGGACACTaGCCCTTCCTGCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLWASGH*PFLPLE
Trigger: TTCCAAGGGCAGGAAGGGGCAGTGTCCTGAAGCCCA...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCACTGCATGGCCACACTaGGGTAGGACCTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLTAWPH*GRTCIW
Trigger: CCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGT...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCTCCTCATGGACTGCATaGCCACACTGGGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLSSWTA*PHWGRT
Trigger: GGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGA...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGCCGGATCAGGAAAGTaGCAACAGCTTCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSAGSGK*QQLQLP
Trigger: AGGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGC...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTGCCGGATCAGGAAAGTaGCAACAGCTTCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIAGSGK*QQLQLP
Trigger: AGGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGC...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTATGGAGAGGAGACAGTaGCATCACAGTGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVMERRQ*HHSGLW
Trigger: CCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCAT...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTGGAGGCTTTACCCTAGGCGGAGCAGGGGAGCCCTaGACTGGGGAAGCCGATGTT +
Preference number: 4 (lower is better)
Translates to: LMLGRGAQYGKSGGFTLGGAGEP*TGEADV
Trigger: AACATCGGCTTCCCCAGTCCAGGGCTCCCCTGCTCC...GCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATAAGAGGGGCTCAGTATaGCAAATCTGGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDKRGSV*QIWRLY
Trigger: GTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTT...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAGGATCTTGGCCTCTCTaGGTCTTCCAAACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTGSWPL*VFQTWK
Trigger: CTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCC...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTAGCTTCGTCCCACGTTaGGTGTGGCCCAACCGGTCA +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGSFVPR*VWPNRS
Trigger: TGACCGGTTGGGCCACACTCAACGTGGGACGAAGCT...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTTGGTACCAGGTTGGATaGTGCTGTGTGGACTGCAAT +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSWYQVG*CCVDCN
Trigger: ATTGCAGTCCACACAGCATCATCCAACCTGGTACCA...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp CACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGAACAGAGCTCGATGTTaGGGAGGGGTGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSGLWCDVFTTELDVEEGNRARC*GGVDSR
Trigger: CCTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTT...CCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAGCATTGTCCATCCCATaGGGCAGGGCTGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAALSIP*GRAGPC
Trigger: GCATGGCCCAGCCCTGCCTCATGGGATGGACAATGC...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGTGGCTTCAACCACATTaGCAACGTCTTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWAWLQPH*QRLLPL
Trigger: CAATGGCAAAAGACGTTGGCAATGTGGTTGAAGCCA...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGGAGGCAAGGGGGCACTaGACACCTCCAGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: WRGDSGITVASGATYLQQEARGH*TPPGTS
Trigger: ACTGGTTCCTGGAGGTGTGCAGTGCCCCCTTGCCTC...CTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACCCAGACTCCGGACCATaGAGCAGGACAGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHPDSGP*SRTGVG
Trigger: TCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGG...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTTTGGATGATGCTGTGTaGACTGCAATAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLILDDAV*TAIAPP
Trigger: GGGTGGTGCTATTGCAGTCCACACAGCATCATCCAA...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGGCTTGGTACCAGGTTaGATGATGCTGTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVGLVPG*MMLCGL
Trigger: CAGTCCACACAGCATCATCCAACCTGGTACCAAGCC...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTCAGGGGCATCCTCATaGACTGCATGGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: HSGLWCDVFTTELDVEEGSGASS*TAWPHW
Trigger: CCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGA...CCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTCCAGGAAACACACACTaGAATCCACCGATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSPGNTH*NPPMGS
Trigger: AGAACCCATCGGTGGATTCCAGTGTGTGTTTCCTGG...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGGAGCCAGTGTCACATaGCTGGGCGGGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWGASVT*LGGMER
Trigger: CCTCTCCATCCCGCCCAGCCATGTGACACTGGCTCC...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGGATCTTGGCCTCTCTaGGTCTTCCAAACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVGSWPL*VFQTWK
Trigger: CTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCC...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTCTAAGGATGGGATCTTaGCCTCTCTGGGTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLILRMGS*PLWVFQ
Trigger: TTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAG...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACACCACCGCTCGCTATaGCTAAGGATGGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: AGWRGDSGITVASGATYLHHRSL*LRMGSW
Trigger: CCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTG...TAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAACCTGGGTTGCTCTGTaGCAGGTGAGGGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVATWVAL*QVRAQE
Trigger: CTCCTGCGCCCTCACCTGCCACAGAGCAACCCAGGT...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
3UTR CAA 72 bp CCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTaGGCCTCTCTGGGTCTTCCAAACCTGGAAGAGTAC +
Preference number: 4 (lower is better)
Translates to: PPPPLAMAKDGI*ASLGLPNLEEY
Trigger: GTACTCTTCCAGGTTTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGCCTGGGAAGACATTTaGACTCAGATGTATCGCCTG +
Preference number: 4 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVAWEDI*TQMYRL
Trigger: CAGGCGATACATCTGAGTTCAAATGTCTTCCCAGGC...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGATTGCCAACGTCTTTTaGCATTGTTTCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWAIANVF*HCFCRQ
Trigger: CTGTCTGCAGAAACAATGGCAAAAGACGTTGGCAAT...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACAGATGGGAGGCCATGTaGTTGGACCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHRWEAM*LDRLDL
Trigger: CAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCT...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCGAGGCAAGGGGGCACTaGACACCTCCAGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: GATHHLRQSQKRWASGHCEARGH*TPPGTS
Trigger: ACTGGTTCCTGGAGGTGTGCAGTGCCCCCTTGCCTC...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGAGGGACAGGCCACAGTaGTGTGTCGAGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVERDRPQ*CVEAAG
Trigger: TCCAGCTGCCTCGACACAGCACTGTGGCCTGTCCCT...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACGACACTGCCCCTTCCTaGCCTTGGAAATGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHDTAPS*PWKWRA
Trigger: GGCACGCCATTTCCAAGGGCAGGAAGGGGCAGTGTC...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAGAAGGTCCCCATACATaGCTTCAACCACATTGCCAA +
Preference number: 4 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTEGPHT*LQPHCQ
Trigger: TTGGCAATGTGGTTGAAGCCATGTATGGGGACCTTC...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGCTCCAGGTGTATGGATaGTCTTTCTTGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKLQVYG*SFLVSM
Trigger: CATGGAGACCAAGAAAGACCATCCATACACCTGGAG...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328257.13
CDS-3UTR CCA 90 bp TTGGTACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGCTTGCATCTGGCCAATaGTCAGATCTTTATCCAATC +
Preference number: 4 (lower is better)
Translates to: LVHLGVPVYREPVSHGWALASGQ*SDLYPI
Trigger: GATTGGATAAAGATCTGACCATTGGCCAGATGCAAG...CGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTGGAGGCTTTACCCTAGGCTCAGGGGCATCCTCATaGACTGCATGGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: LMLGRGAQYGKSGGFTLGSGASS*TAWPHW
Trigger: CCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGA...GCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTCATCACAGTGGCCTCTaGTGCGACGTATTTACAACA +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSHHSGL*CDVFTT
Trigger: TGTTGTAAATACGTCGCACCAGAGGCCACTGTGATG...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAATCTCAAGGTGGGGAAGCCGATGTTaGTCAAGGGCCCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: MHCPSHEAGLGHAKTISRWGSRC*SRALEN
Trigger: GTTTTCCAGGGCCCTTGACCAACATCGGCTTCCCCA...CCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTCTAAGGATGGGATCTTaGCCTCTCTGGGTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVLRMGS*PLWVFQ
Trigger: TTGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAG...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGGTGGGCTCTCCCAGATaGGAGGCCATGTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLVGSPR*EAMCLD
Trigger: GTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCAC...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGAGGTGCCCAGACATGTaGGAGTGGGACAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVERCPDM*EWDSGL
Trigger: GAGCCCACTGTCCCACTCCCACATGTCTGGGCACCT...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTTCCTGCCCTTGGAAATaGCGTGCCTGGGCAATAGGG +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGSCPWK*RAWAIG
Trigger: CCCTATTGCCCAGGCACGCCATTTCCAAGGGCAGGA...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATTGGTCTTTCTTGGTCTaGAGGAATAAGAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDWSFLV*RNKSKF
Trigger: GAACTTGCTCTTATTCCTCCAGACCAAGAAAGACCA...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398427.6
CDS-3UTR TCA 90 bp ACAGTGGGCTCTCCCAGATGGGAGGCCATGTGCTTGGACCGGCTGGACCTGATTATGGACTCAAAATACTaGCTCCAAGGAACAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TVGSPRWEAMCLDRLDLIMDSKY*LQGTGE
Trigger: TTCCCCTGTTCCTTGGAGTCAGTATTTTGAGTCCAT...AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTCAGGACTGGACCCTCTaGACCACTCTTGTAGACTCG +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGQDWTL*TTLVDS
Trigger: CGAGTCTACAAGAGTGGTTCAGAGGGTCCAGTCCTG...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTTTCCTTCACACTGTTTaGCTTGGCCAACCATTGAGA +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSFLHTV*LGQPLR
Trigger: TCTCAATGGTTGGCCAAGTCAAACAGTGTGAAGGAA...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTTCAGCCCAGGGCAGGTaGCCAGACATGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSSAQGR*PDMWEW
Trigger: CCACTCCCACATGTCTGGGCACCTGCCCTGGGCTGA...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTAGGCAAAGACTGGGGATaGCAGGCTGTAATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGWRGDSGITVASGATYLGKDWG*QAVMFL
Trigger: CAGAAACATTACAGCCTGGCATCCCCAGTCTTTGCC...TAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGCCCTTGGAAATGGCGTaGCTGGGCAATAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWPLEMA*LGNRDR
Trigger: CCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGG...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCCCTTGGAAATGGCGTaGCTGGGCAATAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLPLEMA*LGNRDR
Trigger: CCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGG...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGTGGGCTTCAGGACACTaGCCCTTCCTGCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEWASGH*PFLPLE
Trigger: TTCCAAGGGCAGGAAGGGGCAGTGTCCTGAAGCCCA...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCTTGGATGATGCTGTGTaGACTGCAATAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLLDDAV*TAIAPP
Trigger: GGGTGGTGCTATTGCAGTCCACACAGCATCATCCAA...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGTCCAGATTTCGAATCTaGCCACTCTTCACACTCCAT +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKSRFRI*PLFTLH
Trigger: ATGGAGTGTGAAGAGTGGCCAGATTCGAAATCTGGA...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCCAGTGTCACATGGCTaGGCGGGATGGAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIPVSHG*AGWRGD
Trigger: GTCTCCTCTCCATCCCGCCCAGCCATGTGACACTGG...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTCTGGAAGAGTACGACTaGGATAAAACGGTACCTGAC +
Preference number: 4 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVLEEYD*DKTVPD
Trigger: GTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAG...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTACCTGGGTTGCTCTGTaGCAGGTGAGGGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSTWVAL*QVRAQE
Trigger: CTCCTGCGCCCTCACCTGCCACAGAGCAACCCAGGT...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCATCCTGCCCTTGGAAATaGCGTGCCTGGGCAATAGGG +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVASCPWK*RAWAIG
Trigger: CCCTATTGCCCAGGCACGCCATTTCCAAGGGCAGGA...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTTGGGAGGTTGTTGAGTaGAAAGGTGGAGGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGWEVVE*KGGGGY
Trigger: GTAGCCCCCTCCACCTTTCCACTCAACAACCTCCCA...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGCAGGACTGGACCCTCTaGACCACTCTTGTAGACTCG +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEQDWTL*TTLVDS
Trigger: CGAGTCTACAAGAGTGGTTCAGAGGGTCCAGTCCTG...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCACAGGCTCGTTTCTTGTaGTGCTATCCACCACCACCG +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAQARFL*CYPPPP
Trigger: CGGTGGTGGTGGATAGCATCACAAGAAACGAGCCTG...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGACATCGAGGGGAGGCTaGACGCACGTAGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVETSRGG*THVVKQ
Trigger: CTGTTTGACTACGTGCGTGCAGCCTCCCCTCGATGT...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTGCTGTGTCGATTGCCAACGTCTTTTaGCATTGTTTCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: CPWKWRAWAIGTGHSAVSIANVF*HCFCRQ
Trigger: CTGTCTGCAGAAACAATGGCAAAAGACGTTGGCAAT...CGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGCCCCGTAAGAAATTCTaGATGCTATTAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKPRKKF*MLLSAS
Trigger: GGATGCACTTAATAGCATGCAGAATTTCTTACGGGG...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCTCCACCGATGGGTTCTaGAAACCTGTGCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: GATHHLRQSQKRWASGHCSTDGF*KPVPDQ
Trigger: CTGATCCGGCACAGGTTTGCAGAACCCATCGGTGGA...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCATAAAGACCACCCCATaGATTGTCCATCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLIKTTP*IVHPMR
Trigger: CCTCATGGGATGGACAATGCATGGGGTGGTCTTTAT...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAAATTCTCCAGGTGTATaGATGGTCTTTCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTNSPGV*MVFLGL
Trigger: GAGACCAAGAAAGACCATCCATACACCTGGAGAATT...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328257.13
CDS-3UTR CCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTACAGTGGCATCACAGTaGCCTCTGGTGCGACGTATT +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGTVASQ*PLVRRI
Trigger: AATACGTCGCACCAGAGGCCACTGTGATGCCACTGT...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCGTTGGTCAAGGGCCCTaGAAAACAATGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLVGQGP*KTMLLA
Trigger: TGCCAAAAGCATTGTTTTCCAGGGCCCTTGACCAAC...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGTGGGGAAGCCGATGTTaGTCAAGGGCCCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLWGSRC*SRALEN
Trigger: GTTTTCCAGGGCCCTTGACCAACATCGGCTTCCCCA...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTGGAGGCTTTACCCTAGGCGACAATCTCAAGGAATaGAGGTCCCTGAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LMLGRGAQYGKSGGFTLGDNLKE*RSLSLG
Trigger: TCCCAGGCTCAGGGACCTCCATTCCTTGAGATTGTC...GCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCCTGGAAGAGTACGACTaGGATAAAACGGTACCTGAC +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLLEEYD*DKTVPD
Trigger: GTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAG...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTGTGGGCTCTCCCAGATaGGAGGCCATGTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSVGSPR*EAMCLD
Trigger: GTCCAAGCACATGGCCTCCCATCTGGGAGAGCCCAC...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCCTGTGGCTTTGTGCATaGGCTGTATTTAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLLWLCA*AVFNLG
Trigger: ACCCAGGTTAAATACAGCCCATGCACAAAGCCACAG...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCTGGAAATGGCGTGCCTaGGCAATAGGGACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIWKWRA*AIGTGH
Trigger: GTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCA...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCAGCAGGACAGGGGTaGGAGGTTGTTGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWAAGQG*EVVEWK
Trigger: TTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGC...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGCTACAATCCTACACTaGACTCTACTAATAATCGCT +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSATILH*TLLIIA
Trigger: AGCGATTATTAGTAGAGTTCAGTGTAGGATTGTAGC...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp GCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTAACCTTTGTTTCACCATaGCTTCGCAGATCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: AGWRGDSGITVASGATYLTFVSP*LRRSKA
Trigger: AGCTTTGGATCTGCGAAGTCATGGTGAAACAAAGGT...TAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACATTTTGGCAGAATACATaGAAAGGTTGGTACATCTCG +
Preference number: 4 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTFWQNT*KGWYIS
Trigger: CGAGATGTACCAACCTTTTCATGTATTCTGCCAAAA...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTGCCTGGGAAGACATTTaGACTCAGATGTATCGCCTG +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGAWEDI*TQMYRL
Trigger: CAGGCGATACATCTGAGTTCAAATGTCTTCCCAGGC...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTCACAGTGGCCTCTGGTaGGACGTATTTACAACAGAG +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGHSGLW*DVFTTE
Trigger: CTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGTATTTAACCTGGGTTaGTCTGTGGCAGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEVFNLG*SVAGEG
Trigger: GCCCTCACCTGCCACAGAGCAACCCAGGTTAAATAC...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTCTTCTACATCTTCCATaGACTCAAAATACTGACTCC +
Preference number: 4 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSLLHLP*TQNTDS
Trigger: GGAGTCAGTATTTTGAGTCCATGGAAGATGTAGAAG...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCGGCTTGGTACCAGGTTaGATGATGCTGTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: GATHHLRQSQKRWASGHCGLVPG*MMLCGL
Trigger: CAGTCCACACAGCATCATCCAACCTGGTACCAAGCC...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCGGTAGGACCTGCATCTaGAACTTCCCTTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GATHHLRQSQKRWASGHCGRTCI*NFPCIW
Trigger: CCAGATGCAAGGGAAGTTCCAGATGCAGGTCCTACC...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAGGTAGGACCTGCATCTaGAACTTCCCTTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAGRTCI*NFPCIW
Trigger: CCAGATGCAAGGGAAGTTCCAGATGCAGGTCCTACC...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACACTGGAATCCACCGATaGGTTCTGCAAACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHTGIHR*VLQTCA
Trigger: GGCACAGGTTTGCAGAACCCATCGGTGGATTCCAGT...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCACTGGAATCCACCGATaGGTTCTGCAAACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GATHHLRQSQKRWASGHCTGIHR*VLQTCA
Trigger: GGCACAGGTTTGCAGAACCCATCGGTGGATTCCAGT...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGGGCTGTATTTAACCTaGGTTGCTCTGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWGLYLT*VALWQV
Trigger: CACCTGCCACAGAGCAACCCAGGTTAAATACAGCCC...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCGGGCTGTATTTAACCTaGGTTGCTCTGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GATHHLRQSQKRWASGHCGLYLT*VALWQV
Trigger: CACCTGCCACAGAGCAACCCAGGTTAAATACAGCCC...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGGAAGAAGGCAAAGACTaGGGATGCCAGGCTGTAATG +
Preference number: 4 (lower is better)
Translates to: WRGDSGITVASGATYLQQEEGKD*GCQAVM
Trigger: CATTACAGCCTGGCATCCCCAGTCTTTGCCTTCTTC...CTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCACAGTCACAGAAAAGATaGGCTTCAGGACACTGCCCC +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAQSQKR*ASGHCP
Trigger: GGGGCAGTGTCCTGAAGCCCATCTTTTCTGTGACTG...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCAGTCACAGAAAAGATaGGCTTCAGGACACTGCCCC +
Preference number: 4 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLQSQKR*ASGHCP
Trigger: GGGGCAGTGTCCTGAAGCCCATCTTTTCTGTGACTG...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCGCAGCAGGACAGGGGTaGGAGGTTGTTGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIAAGQG*EVVEWK
Trigger: TTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGC...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGTGGTACCAGGTTGGATaGTGCTGTGTGGACTGCAAT +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEWYQVG*CCVDCN
Trigger: ATTGCAGTCCACACAGCATCATCCAACCTGGTACCA...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp ATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAATCTCAAGGTTCCTTCACACTGTTTaGCTTGGCCAACCATTGAGA +
Preference number: 4 (lower is better)
Translates to: MHCPSHEAGLGHAKTISRFLHTV*LGQPLR
Trigger: TCTCAATGGTTGGCCAAGTCAAACAGTGTGAAGGAA...CCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTGCTGTGTCGTTCCACTATAGATTTTaGGCCTTCTGGACTTGTAAT +
Preference number: 4 (lower is better)
Translates to: CPWKWRAWAIGTGHSAVSFHYRF*AFWTCN
Trigger: ATTACAAGTCCAGAAGGCTCAAAATCTATAGTGGAA...CGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCGGTTCTGCAAACCTGTaGCGGATCAGGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIGSANL*RIRKVA
Trigger: TGCCACTTTCCTGATCCGGCACAGGTTTGCAGAACC...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAGGCAAAGACTGGGGATaGCAGGCTGTAATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAGKDWG*QAVMFL
Trigger: CAGAAACATTACAGCCTGGCATCCCCAGTCTTTGCC...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCCAGGAAACACACACTaGAATCCACCGATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLPGNTH*NPPMGS
Trigger: AGAACCCATCGGTGGATTCCAGTGTGTGTTTCCTGG...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAATCTCAAGGTCAGTATGGCAAATCTaGAGGCTTTACCCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: MHCPSHEAGLGHAKTISRSVWQI*RLYPRQ
Trigger: TTGCCTAGGGTAAAGCCTCCAGATTTGCCATACTGA...CCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCGACAATCTCAAGGAATaGAGGTCCCTGAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIDNLKE*RSLSLG
Trigger: TCCCAGGCTCAGGGACCTCCATTCCTTGAGATTGTC...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTTGGGTCTTCCAAACCTaGAAGAGTACGACTGGGATA +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGWVFQT*KSTTGI
Trigger: TATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTACCTTTGTTTCACCATaGCTTCGCAGATCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGTFVSP*LRRSKA
Trigger: AGCTTTGGATCTGCGAAGTCATGGTGAAACAAAGGT...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGATCTGGAACTTCCCTTaGATCTGGCCAATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWIWNFP*IWPMVR
Trigger: TCTGACCATTGGCCAGATGCAAGGGAAGTTCCAGAT...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAATAAAGACCACCCCATaGATTGTCCATCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAIKTTP*IVHPMR
Trigger: CCTCATGGGATGGACAATGCATGGGGTGGTCTTTAT...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAGAAGGTCCCCATACATaGCTTCAACCACATTGCCAA +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAEGPHT*LQPHCQ
Trigger: TTGGCAATGTGGTTGAAGCCATGTATGGGGACCTTC...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGTCACACTGTTTGACTTaGCCAACCATTGAGACACGG +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWSHCLT*PTIETR
Trigger: CCGTGTCTCAATGGTTGGCCAAGTCAAACAGTGTGA...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCATCACAGTGGCCTCTaGTGCGACGTATTTACAACA +
Preference number: 4 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLHHSGL*CDVFTT
Trigger: TGTTGTAAATACGTCGCACCAGAGGCCACTGTGATG...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGTGGGTCTTCCAAACCTaGAAGAGTACGACTGGGATA +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWWVFQT*KSTTGI
Trigger: TATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCCTGTGGCTTTGTGCATaGGCTGTATTTAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: GATHHLRQSQKRWASGHCLWLCA*AVFNLG
Trigger: ACCCAGGTTAAATACAGCCCATGCACAAAGCCACAG...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCTCCAGGTGTATGGATaGTCTTTCTTGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAILQVYG*SFLVWR
Trigger: CCTCCAGACCAAGAAAGACCATCCATACACCTGGAG...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398427.6
3UTR CAA 72 bp TGTGAAATCCACAAATGGCAAAGAGAAGCTGTAGGTTaGAAGAGGCAAGGGGGCACTGCACACCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: CEIHKWQREAVG*KRQGGTAHLQE
Trigger: TTCCTGGAGGTGTGCAGTGCCCCCTTGCCTCTTCAAACCTACAGCTTCTCTTTGCCATTTGTGGATTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACTGGCTTCAACCACATTaGCAACGTCTTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHWLQPH*QRLLPL
Trigger: CAATGGCAAAAGACGTTGGCAATGTGGTTGAAGCCA...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTCTGCATGCTATTAAGTaGATCCATAGCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGLHAIK*IHSCTF
Trigger: GAAGGTACAGCTATGGATGCACTTAATAGCATGCAG...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp CTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTGGAGGCTTTACCCTAGGCCCCCGTAAGAAATTCTaGATGCTATTAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: LMLGRGAQYGKSGGFTLGPRKKF*MLLSAS
Trigger: GGATGCACTTAATAGCATGCAGAATTTCTTACGGGG...GCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp CACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGCTTCTACATCTTCCATaGACTCAAAATACTGACTCC +
Preference number: 4 (lower is better)
Translates to: HSGLWCDVFTTELDVEEGLLHLP*TQNTDS
Trigger: GGAGTCAGTATTTTGAGTCCATGGAAGATGTAGAAG...CCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCTCACACTGTTTGACTTaGCCAACCATTGAGACACGG +
Preference number: 4 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAISHCLT*PTIETR
Trigger: CCGTGTCTCAATGGTTGGCCAAGTCAAACAGTGTGA...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTATGGATGGTCTTTCTTaGTCTCCATGTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGMDGLS*SPCHLP
Trigger: AGGAAGATGACATGGAGACCAAGAAAGACCATCCAT...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328257.13
CDS-3UTR CCA 90 bp CTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTGGAGGCTTTACCCTAGGCAACTTCCCTTGCATCTaGCCAATGGTCAGATCTTTA +
Preference number: 4 (lower is better)
Translates to: LMLGRGAQYGKSGGFTLGNFPCI*PMVRSL
Trigger: TAAAGATCTGACCATTGGCCAGATGCAAGGGAAGTT...GCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCATCAGTATGGCAAATCTaGAGGCTTTACCCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVASVWQI*RLYPRQ
Trigger: TTGCCTAGGGTAAAGCCTCCAGATTTGCCATACTGA...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp CTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTGGAGGCTTTACCCTAGGCGCTACAATCCTACACTaGACTCTACTAATAATCGCT +
Preference number: 4 (lower is better)
Translates to: LMLGRGAQYGKSGGFTLGATILH*TLLIIA
Trigger: AGCGATTATTAGTAGAGTTCAGTGTAGGATTGTAGC...GCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGTGTTTCTGTGTGGAGTaGTGTGAAATCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWCFCVE*CEIHKW
Trigger: CCATTTGTGGATTTCACATCACTCCACACAGAAACA...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGCTGCATGCTATTAAGTaGATCCATAGCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWLHAIK*IHSCTF
Trigger: GAAGGTACAGCTATGGATGCACTTAATAGCATGCAG...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACCTTGCATCTGGCCAATaGTCAGATCTTTATCCAATC +
Preference number: 4 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHLASGQ*SDLYPI
Trigger: GATTGGATAAAGATCTGACCATTGGCCAGATGCAAG...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCAACTTCCCTTGCATCTaGCCAATGGTCAGATCTTTA +
Preference number: 4 (lower is better)
Translates to: GATHHLRQSQKRWASGHCNFPCI*PMVRSL
Trigger: TAAAGATCTGACCATTGGCCAGATGCAAGGGAAGTT...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTGTTGGTCAAGGGCCCTaGAAAACAATGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSVGQGP*KTMLLA
Trigger: TGCCAAAAGCATTGTTTTCCAGGGCCCTTGACCAAC...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTAAGAGGGGCTCAGTATaGCAAATCTGGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSKRGSV*QIWRLY
Trigger: GTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTT...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGATGGATGGTCTTTCTTaGTCTGGAGGAATAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLMDGLS*SGGIRA
Trigger: TGCTCTTATTCCTCCAGACCAAGAAAGACCATCCAT...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398427.6
CDS-3UTR CCA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACAATTCTCCAGGTGTATaGATGGTCTTTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHNSPGV*MVFLGL
Trigger: CAGACCAAGAAAGACCATCCATACACCTGGAGAATT...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398427.6
CDS-3UTR TCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGTTTTGGCAGAATACATaGAAAGGTTGGTACATCTCG +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEFWQNT*KGWYIS
Trigger: CGAGATGTACCAACCTTTTCATGTATTCTGCCAAAA...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp TGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGCTCGAAAAGTATCCTTaGCAGTTTCATTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: WRGDSGITVASGATYLQQLEKYP*QFHSLL
Trigger: AAGTAGAGAATGAAACTGGCAAGGATACTTTTCGAG...CTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR GCA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTCTCGAAAAGTATCCTTaGCAGTTTCATTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: TVASGATYLQQSSMLRRGLEKYP*QFHSLL
Trigger: AAGTAGAGAATGAAACTGGCAAGGATACTTTTCGAG...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CCA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTTCCAGATTTCGAATCTaGCCACTCTTCACACTCCAT +
Preference number: 4 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSSRFRI*PLFTLH
Trigger: ATGGAGTGTGAAGAGTGGCCAGATTCGAAATCTGGA...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGTTCCACTATAGATTTTaGGCCTTCTGGACTTGTAAT +
Preference number: 4 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEFHYRF*AFWTCN
Trigger: ATTACAAGTCCAGAAGGCTCAAAATCTATAGTGGAA...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR TCA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTTGTTTCTGTGTGGAGTaGTGTGAAATCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSCFCVE*CEIHKW
Trigger: CCATTTGTGGATTTCACATCACTCCACACAGAAACA...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS GCA 90 bp TTCCAGGGCCCATTCGCATCTTGGCTCCGCTCTGACTGCCCCCGCTaGCGGGTAGAGGTGGGCGAGAGGGAAGGCGGCCGAGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: FQGPFASWLRSDCPR*RVEVGEREGGRGAC
Trigger: GCATGCACCTCGGCCGCCTTCCCTCTCGCCCACCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGAATGGGCCCTGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS GCA 90 bp CCCGCTTTCTTCCAGGGCCCATTCGCATCTTGGCTCCGCTCTGACTaGCCCCGCTGCCGGGTAGAGGTGGGCGAGAGGGAAGGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: PAFFQGPFASWLRSD*PRCRVEVGEREGGR
Trigger: TCGGCCGCCTTCCCTCTCGCCCACCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGAATGGGCCCTGGAAGAAAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS TCA 90 bp AAGTCCCGCTTTCTTCCAGGGCCCATTCGCATCTTGGCTCCGCTCTaGCTGCCCCCGCTGCCGGGTAGAGGTGGGCGAGAGGGAAGGCGG +
Preference number: 5 (lower is better)
Translates to: KSRFLPGPIRILAPL*LPPLPGRGGREGRR
Trigger: CCGCCTTCCCTCTCGCCCACCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGAATGGGCCCTGGAAGAAAGCGGGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS-3UTR CAA 90 bp GTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTTGGGAGGCCATGTGCTaGGACCGGCTGGACCTGATT +
Preference number: 5 (lower is better)
Translates to: VGPRLRTMQQDRGGRLLSWEAMC*DRLDLI
Trigger: AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCA...ACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp ATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACAATCTCAAGGTGCCCCTTCCTGCCCTaGGAAATGGCGTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: MHCPSHEAGLGHAKTISRCPFLP*EMACLG
Trigger: GCCCAGGCACGCCATTTCCAAGGGCAGGAAGGGGCA...CCTTGAGATTGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS CCA 90 bp CTGAGCACCAGACTCACCTTGTCAGGGGCATCCTCATGGACTGCATaGCCACACTGGGGTAGGACCTGCATCTGGAACTTCCCTTGCATC +
Preference number: 5 (lower is better)
Translates to: LSTRLTLSGASSWTA*PHWGRTCIWNFPCI
Trigger: GATGCAAGGGAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTGAGTCTGGTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS-3UTR CAA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCCAACAGAGCTCGATGTaGAGGAGGGGTGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLQQSSM*RRGGQQ
Trigger: CTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTTG...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCCTGGGGAAGCCGATGTaGGTCAAGGGCCCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLLGKPM*VKGPGK
Trigger: TTTTCCAGGGCCCTTGACCAACATCGGCTTCCCCAG...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATAGCCTGGGAAGACATTaGAACTCAGATGTATCGCCT +
Preference number: 5 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDSLGRH*NSDVSP
Trigger: AGGCGATACATCTGAGTTCAAATGTCTTCCCAGGCT...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGAGAGAAGCTGTAGGTTaGAAGAGGCAAGGGGGCACT +
Preference number: 5 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKREAVG*KRQGGT
Trigger: AGTGCCCCCTTGCCTCTTCAAACCTACAGCTTCTCT...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGTGCCCCTTCCTGCCCTaGGAAATGGCGTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: WHHSGLWCDVFTTELDVECPFLP*EMACLG
Trigger: GCCCAGGCACGCCATTTCCAAGGGCAGGAAGGGGCA...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS CCA 90 bp TCAGCTACCTTGTCAGGGGCATCCTCATGGACTGCATGGCCACACTaGGGTAGGACCTGCATCTGGAACTTCCCTTGCATCTGGCCAATG +
Preference number: 5 (lower is better)
Translates to: SATLSGASSWTAWPH*GRTCIWNFPCIWPM
Trigger: CATTGGCCAGATGCAAGGGAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000535205.5
ENST00000538501.5
ENST00000543525.3
CDS CCA 90 bp GCAACAGCTTCAGCTACCTTGTCAGGGGCATCCTCATGGACTGCATaGCCACACTGGGGTAGGACCTGCATCTGGAACTTCCCTTGCATC +
Preference number: 5 (lower is better)
Translates to: ATASATLSGASSWTA*PHWGRTCIWNFPCI
Trigger: GATGCAAGGGAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTAGCTGAAGCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000535205.5
ENST00000538501.5
ENST00000543525.3
CDS CCA 90 bp AGACTCACCTTGTCAGGGGCATCCTCATGGACTGCATGGCCACACTaGGGTAGGACCTGCATCTGGAACTTCCCTTGCATCTGGCCAATG +
Preference number: 5 (lower is better)
Translates to: RLTLSGASSWTAWPH*GRTCIWNFPCIWPM
Trigger: CATTGGCCAGATGCAAGGGAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS-3UTR CAA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTACAGACCCAAGAGGCTaGGTACCAGGTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVTDPRG*VPGWMM
Trigger: CATCATCCAACCTGGTACCAAGCCTCTTGGGTCTGT...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATATTCCTTCACACTGTTaGACTTGGCCAACCATTGAG +
Preference number: 5 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDIPSHC*TWPTIE
Trigger: CTCAATGGTTGGCCAAGTCAAACAGTGTGAAGGAAT...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TACATCTCGGGGTGCCCGTCTACCGGGAGCCAGTGTCACATGGCTGGGCGGGATCAACTAAGAAAGAGATaGGATAAGCCTCGGAACCAG +
Preference number: 5 (lower is better)
Translates to: YISGCPSTGSQCHMAGRDQLRKR*DKPRNQ
Trigger: CTGGTTCCGAGGCTTATCCAATCTCTTTCTTAGTTG...ATCCCGCCCAGCCATGTGACACTGGCTCCCGGTAGACGGGCACCCCGAGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TGCCCTTGGAAATGGCGTGCCTGGGCAATAGGGACAGGCCACAGTGCTGTGTCGGAATACATGAAAAGGTaGGTACATCTCGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: CPWKWRAWAIGTGHSAVSEYMKR*VHLGVP
Trigger: GGGCACCCCGAGATGTACCAACCTTTTCATGTATTC...CGACACAGCACTGTGGCCTGTCCCTATTGCCCAGGCACGCCATTTCCAAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp GCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTAGCTAAGGATGGGATCTaGGCCTCTCTGGGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: AGWRGDSGITVASGATYLAKDGI*ASLGLP
Trigger: TGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGC...TAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGTGGGAGGCCATGTGCTaGGACCGGCTGGACCTGATT +
Preference number: 5 (lower is better)
Translates to: WRGDSGITVASGATYLQQWEAMC*DRLDLI
Trigger: AATCAGGTCCAGCCGGTCCAAGCACATGGCCTCCCA...CTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp CAAAGTAGGTCCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTAGAGAAGCTGTAGGTTaGAAGAGGCAAGGGGGCACT +
Preference number: 5 (lower is better)
Translates to: QSRSQTPDHAAGQGWEVVREAVG*KRQGGT
Trigger: AGTGCCCCCTTGCCTCTTCAAACCTACAGCTTCTCT...AACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGGACCTACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS GCA 90 bp GGAGAGCTGGTGGAACTGCATCTGCATAGGCTCCACAGCAGCTGCTaGAGGCAATGCAGGCTGAGACTCAGAGACTTGTCTTCTGTGACA +
Preference number: 5 (lower is better)
Translates to: GELVELHLHRLHSSC*RQCRLRLRDLSSVT
Trigger: TGTCACAGAAGACAAGTCTCTGAGTCTCAGCCTGCATTGCCTGCAGCAGCTGCTGTGGAGCCTATGCAGATGCAGTTCCACCAGCTCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CCA 90 bp GCATCCTCATGGACTGCATGGCCACACTGGGGTAGGACCTGCATCTaGAACTTCCCTGGAGAGGAATCAAAGCAAGGCAACTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: ASSWTAWPHWGRTCI*NFPGEESKQGNFSD
Trigger: GTCGCTGAAGTTGCCTTGCTTTGATTCCTCTCCAGGGAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 90 bp TCAGCTACCTTGTCAGGGGCATCCTCATGGACTGCATGGCCACACTaGGGTAGGACCTGCATCTGGAACTTCCCTGGAGAGGAATCAAAG +
Preference number: 5 (lower is better)
Translates to: SATLSGASSWTAWPH*GRTCIWNFPGEESK
Trigger: CTTTGATTCCTCTCCAGGGAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 90 bp TTACAGTCACTGAGCACCAGACTCACCTTGTCAGGGGCATCCTCATaGACTGCATGGCCACACTGGGGTAGGACCTGCATCTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LQSLSTRLTLSGASS*TAWPHWGRTCIWNF
Trigger: GAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTGAGTCTGGTGCTCAGTGACTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS-3UTR CAA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTGACGCCCTGTCGCCTTaGGACAGCACCCAGCTACCC +
Preference number: 5 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSDALSP*DSTQLP
Trigger: GGGTAGCTGGGTGCTGTCCAAAGGCGACAGGGCGTC...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328257.13
CDS-3UTR CAA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGAAGCTTCGTCCCACGTaGAGTGTGGCCCAACCGGTC +
Preference number: 5 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEKLRPT*SVAQPV
Trigger: GACCGGTTGGGCCACACTCAACGTGGGACGAAGCTT...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS GCA 90 bp GTGGAACTGCATCTGCATAGGCTCCACAGCAGCTGCTGCAGGCAATaGAGGCTGAGACTCAGAGACTTGTCTTCTGTGACATCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: VELHLHRLHSSCCRQ*RLRLRDLSSVTSRV
Trigger: AACCCTGGATGTCACAGAAGACAAGTCTCTGAGTCTCAGCCTGCATTGCCTGCAGCAGCTGCTGTGGAGCCTATGCAGATGCAGTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS-3UTR CAA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCAAGCTTCGTCCCACGTaGAGTGTGGCCCAACCGGTC +
Preference number: 5 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIKLRPT*SVAQPV
Trigger: GACCGGTTGGGCCACACTCAACGTGGGACGAAGCTT...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp CCCAGACTCCGGACCATGCAGCAGGACAGGGGTGGGAGGTTGTTGAGTGGAAAGATTCCTTCACACTGTTaGACTTGGCCAACCATTGAG +
Preference number: 5 (lower is better)
Translates to: PRLRTMQQDRGGRLLSGKIPSHC*TWPTIE
Trigger: CTCAATGGTTGGCCAAGTCAAACAGTGTGAAGGAAT...CTTTCCACTCAACAACCTCCCACCCCTGTCCTGCTGCATGGTCCGGAGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp GACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCCATGCCAAGACACAACTAAGAAAGAGATaGGATAAGCCTCGGAACCAG +
Preference number: 5 (lower is better)
Translates to: DHPMHCPSHEAGLGHAKTQLRKR*DKPRNQ
Trigger: CTGGTTCCGAGGCTTATCCAATCTCTTTCTTAGTTG...TGTCTTGGCATGGCCCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp ACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTACAGCTTCAGCTACCTaGTCAGGGGCATCCTCATGG +
Preference number: 5 (lower is better)
Translates to: TVASGATYLQQSSMLRRGTASAT*SGASSW
Trigger: CCATGAGGATGCCCCTGACAAGGTAGCTGAAGCTGT...ACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGCAACAGAGCTCGATGTaGAGGAGGGGTGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWQQSSM*RRGGQQ
Trigger: CTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTTG...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCACTGGGGAAGCCGATGTaGGTCAAGGGCCCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVALGKPM*VKGPGK
Trigger: TTTTCCAGGGCCCTTGACCAACATCGGCTTCCCCAG...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS TCA 90 bp TCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTaGGGAGGGGTGGACAGCAGGTCACTAACAGCCAGGAAACACACA +
Preference number: 5 (lower is better)
Translates to: SQWPLVRRIYNRARC*GGVDSRSLTARKHT
Trigger: TGTGTGTTTCCTGGCTGTTAGTGACCTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000539021.1
ENST00000541340.5
ENST00000543525.3
CDS GCA 90 bp CCAGGAAACACACACTGGAATCCACCGATGGGTTCTGCAAACCTGTaGCGGATCAGGAAAGTGGCAACAGCTTCAGCTACCTGGAAATGG +
Preference number: 5 (lower is better)
Translates to: PGNTHWNPPMGSANL*RIRKVATASATWKW
Trigger: CCATTTCCAGGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGCACAGGTTTGCAGAACCCATCGGTGGATTCCAGTGTGTGTTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CCA 90 bp GGAATCCACCGATGGGTTCTGCAAACCTGTGCCGGATCAGGAAAGTaGCAACAGCTTCAGCTACCTGGAAATGGGAGAGATATTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GIHRWVLQTCAGSGK*QQLQLPGNGRDIPG
Trigger: GCCTGGAATATCTCTCCCATTTCCAGGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGCACAGGTTTGCAGAACCCATCGGTGGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS-3UTR CAA 90 bp CACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGGCATTCTCCAGAGACTaGAAGGTTTTAGGACGACCC +
Preference number: 5 (lower is better)
Translates to: HSGLWCDVFTTELDVEEGAFSRD*KVLGRP
Trigger: GGGTCGTCCTAAAACCTTCAAGTCTCTGGAGAATGC...CCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCAACAGCTTCAGCTACCTaGTCAGGGGCATCCTCATGG +
Preference number: 5 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVATASAT*SGASSW
Trigger: CCATGAGGATGCCCCTGACAAGGTAGCTGAAGCTGT...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGCTAAGGATGGGATCTaGGCCTCTCTGGGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEAKDGI*ASLGLP
Trigger: TGGAAGACCCAGAGAGGCCAAGATCCCATCCTTAGC...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS TCA 90 bp CCCAGTCCATGTCAACTGCCTTCAGGCAGTCTCAGGGGCCATATCTaGTTCTTCTGTCTGCCCAGCATCATGCATAGGTCTTGCACAGAA +
Preference number: 5 (lower is better)
Translates to: PSPCQLPSGSLRGHI*FFCLPSIMHRSCTE
Trigger: TTCTGTGCAAGACCTATGCATGATGCTGGGCAGACAGAAGAATCAGATATGGCCCCTGAGACTGCCTGAAGGCAGTTGACATGGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS-3UTR CAA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCCATTGCCAACGTCTTTaGCCATTGTTTCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLHCQRL*PLFLQT
Trigger: TGTCTGCAGAAACAATGGCAAAAGACGTTGGCAATG...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp GGGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGACAGACCCAAGAGGCTaGGTACCAGGTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: GGYTSPKTVTEKMGFRTLTDPRG*VPGWMM
Trigger: CATCATCCAACCTGGTACCAAGCCTCTTGGGTCTGT...CAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TTTGGCCTGTGGCTTTGTGCATGGGCTGTATTTAACCTGGGTTGCTCTGTGGCACATCTGGAACTTCCCTaGCATCTGGCCAATGGTCAG +
Preference number: 5 (lower is better)
Translates to: FGLWLCAWAVFNLGCSVAHLELP*HLANGQ
Trigger: CTGACCATTGGCCAGATGCAAGGGAAGTTCCAGATG...TGCCACAGAGCAACCCAGGTTAAATACAGCCCATGCACAAAGCCACAGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCCACCATCTGGAACTTCCCTaGCATCTGGCCAATGGTCAG +
Preference number: 5 (lower is better)
Translates to: CLDRLDLIFRLVSCDAIHHLELP*HLANGQ
Trigger: CTGACCATTGGCCAGATGCAAGGGAAGTTCCAGATG...GTGGATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp GCGGGATGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTATATGGATGGTCTTTCTaGGTCTGGAGGAATAAGAGC +
Preference number: 5 (lower is better)
Translates to: AGWRGDSGITVASGATYLYGWSF*VWRNKS
Trigger: GCTCTTATTCCTCCAGACCAAGAAAGACCATCCATA...TAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCATCCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398427.6
CDS-3UTR CAA 90 bp AAGGGAAAAATAAAGACCACCCCATGCATTGTCCATCCCATGAGGCAGGGCTGGGCATTCTCCAGAGACTaGAAGGTTTTAGGACGACCC +
Preference number: 5 (lower is better)
Translates to: KGKIKTTPCIVHPMRQGWAFSRD*KVLGRP
Trigger: GGGTCGTCCTAAAACCTTCAAGTCTCTGGAGAATGC...CCAGCCCTGCCTCATGGGATGGACAATGCATGGGGTGGTCTTTATTTTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS TCA 90 bp GGCAGAATGACCTCCTCCATGCAGAAGGAGCAGGACTGGACCCTCTaGACCACTCTTGTAGACTCGAAAAGTATCCTTGCCAGTTTCATT +
Preference number: 5 (lower is better)
Translates to: GRMTSSMQKEQDWTL*TTLVDSKSILASFI
Trigger: AATGAAACTGGCAAGGATACTTTTCGAGTCTACAAGAGTGGTTCAGAGGGTCCAGTCCTGCTCCTTCTGCATGGAGGAGGTCATTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS CCA 90 bp GTGGACTGCAATAGCACCACCCATGCTATGTCCAATCAGCATAATTaGAGGAGGAAGGTCCCCATACATGGCTTCAACCACATTGCCAAC +
Preference number: 5 (lower is better)
Translates to: VDCNSTTHAMSNQHN*RRKVPIHGFNHIAN
Trigger: GTTGGCAATGTGGTTGAAGCCATGTATGGGGACCTTCCTCCTCCAATTATGCTGATTGGACATAGCATGGGTGGTGCTATTGCAGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp GATGCTATCCACCACCACCGCTCGCTATGGCTAAGGATGGGATCTTGGCCTCTCACTCGAAAAGTATCCTaGCCAGTTTCATTCTCTACT +
Preference number: 5 (lower is better)
Translates to: DAIHHHRSLWLRMGSWPLTRKVS*PVSFST
Trigger: AGTAGAGAATGAAACTGGCAAGGATACTTTTCGAGT...GAGAGGCCAAGATCCCATCCTTAGCCATAGCGAGCGGTGGTGGTGGATAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGATGGCTTCAACCACATaGCCAACGTCTTTTGCCATT +
Preference number: 5 (lower is better)
Translates to: WRGDSGITVASGATYLQQMASTT*PTSFAI
Trigger: AATGGCAAAAGACGTTGGCAATGTGGTTGAAGCCAT...CTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp CTGATGCTAGGAAGAGGGGCTCAGTATGGCAAATCTGGAGGCTTTACCCTAGGCATGGCTTCAACCACATaGCCAACGTCTTTTGCCATT +
Preference number: 5 (lower is better)
Translates to: LMLGRGAQYGKSGGFTLGMASTT*PTSFAI
Trigger: AATGGCAAAAGACGTTGGCAATGTGGTTGAAGCCAT...GCCTAGGGTAAAGCCTCCAGATTTGCCATACTGAGCCCCTCTTCCTAGCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp ATGTGCTTGGACCGGCTGGACCTGATTTTCAGGCTCGTTTCTTGTGATGCTATCGAATACATGAAAAGGTaGGTACATCTCGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: MCLDRLDLIFRLVSCDAIEYMKR*VHLGVP
Trigger: GGGCACCCCGAGATGTACCAACCTTTTCATGTATTC...GATAGCATCACAAGAAACGAGCCTGAAAATCAGGTCCAGCCGGTCCAAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS TCA 90 bp GTGTATGGATGGTCTTTCTTGGTCTGGAGGAATAAGAGCAAGTTCTaGGTCTCCGAGGGCAACCCCTCCATGTCATCTTCCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: VYGWSFLVWRNKSKF*VSEGNPSMSSSFFL
Trigger: GAGGAAAAAGGAAGATGACATGGAGGGGTTGCCCTCGGAGACTCAGAACTTGCTCTTATTCCTCCAGACCAAGAAAGACCATCCATACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398427.6
CDS GCA 90 bp CAGGATTGTCTGATTCCAAGGCTGGTGATCAACAATGATTTCAAATaGTATCCCAGTCCATGTCAACTGCCTTCAGGCAGTCTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: QDCLIPRLVINNDFK*YPSPCQLPSGSLRG
Trigger: GCCCCTGAGACTGCCTGAAGGCAGTTGACATGGACTGGGATAGCATTTGAAATCATTGTTGATCACCAGCCTTGGAATCAGACAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS GCA 90 bp AGTAGCTCCTCAGCACATATACACAAAACCAATACCATAAGCAGCTaGCAGGGAGAAGTTGGAGAGCTGGTGGAACTGCATCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: SSSSAHIHKTNTISS*QGEVGELVELHLHR
Trigger: CCTATGCAGATGCAGTTCCACCAGCTCTCCAACTTCTCCCTGGCAGCTGCTTATGGTATTGGTTTTGTGTATATGTGCTGAGGAGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS-3UTR CAA 90 bp TGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGCATTGCCAACGTCTTTaGCCATTGTTTCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: WHHSGLWCDVFTTELDVEHCQRL*PLFLQT
Trigger: TGTCTGCAGAAACAATGGCAAAAGACGTTGGCAATG...CTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp CACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTGAGGAGGGGTCTTCCTTTTTCCTCTaGCTTATAGACTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: HSGLWCDVFTTELDVEEGSSFFL*LIDSLP
Trigger: AGGAAGTGAGTCTATAAGCAAGAGGAAAAAGGAAGA...CCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TGGAGAGGAGACAGTGGCATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGTCTTCCTTTTTCCTCTaGCTTATAGACTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: WRGDSGITVASGATYLQQSSFFL*LIDSLP
Trigger: AGGAAGTGAGTCTATAAGCAAGAGGAAAAAGGAAGA...CTGTTGTAAATACGTCGCACCAGAGGCCACTGTGATGCCACTGTCTCCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS TCA 90 bp AGTAACCTGCCCAAGGCCACTTCATTAATTAGTGGAGGAATAAGATaGTCCCATTTAGTAAAGTCCATCCTGTGCCCCTCCTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SNLPKATSLISGGIR*SHLVKSILCPSSCS
Trigger: ACTGCAGGAGGAGGGGCACAGGATGGACTTTACTAAATGGGATCATCTTATTCCTCCACTAATTAATGAAGTGGCCTTGGGCAGGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS-3UTR CAA 90 bp GGGGCTACACATCACCTAAGACAGTCACAGAAAAGATGGGCTTCAGGACACTGCACTCGAAAAGTATCCTaGCCAGTTTCATTCTCTACT +
Preference number: 5 (lower is better)
Translates to: GATHHLRQSQKRWASGHCTRKVS*PVSFST
Trigger: AGTAGAGAATGAAACTGGCAAGGATACTTTTCGAGT...GCAGTGTCCTGAAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGTGTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS-3UTR CAA 90 bp TGGGTCTTCCAAACCTGGAAGAGTACGACTGGGATAAAACGGTACCTGACTAGTTATGGATGGTCTTTCTaGGTCTCCATGTCATCTTCC +
Preference number: 5 (lower is better)
Translates to: WVFQTWKSTTGIKRYLTSYGWSF*VSMSSS
Trigger: GGAAGATGACATGGAGACCAAGAAAGACCATCCATA...ACTAGTCAGGTACCGTTTTATCCCAGTCGTACTCTTCCAGGTTTGGAAGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328257.13
CDS TCA 90 bp GATTCAAACCCAGGATTGTCTGATTCCAAGGCTGGTGATCAACAATaGTTTCAAATGCTATCCCAGTCCATGTCAACTGCCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: DSNPGLSDSKAGDQQ*FQMLSQSMSTAFRQ
Trigger: CTGCCTGAAGGCAGTTGACATGGACTGGGATAGCATTTGAAATCATTGTTGATCACCAGCCTTGGAATCAGACAATCCTGGGTTTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 90 bp TTCATAACTAAGTCAGTTGGTTTGAACACAGTGCTGGCAAAGCTGTaGTTTGGAATCTATGCAGCCTTAGCCATTTCCCTTTGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: FITKSVGLNTVLAKL*FGIYAALAISLCSV
Trigger: CACAGAACAAAGGGAAATGGCTAAGGCTGCATAGATTCCAAACCACAGCTTTGCCAGCACTGTGTTCAAACCAACTGACTTAGTTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 90 bp GTTAGATCAGCTCTGATGACTAGGGACGCATTTGTCCTTCCTCTTTaGAAGAGTAGGTATAATCAGAGAGAACTCACATACACCAACAAC +
Preference number: 5 (lower is better)
Translates to: VRSALMTRDAFVLPL*KSRYNQRELTYTNN
Trigger: GTTGTTGGTGTATGTGAGTTCTCTCTGATTATACCTACTCTTCCAAAGAGGAAGGACAAATGCGTCCCTAGTCATCAGAGCTGATCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS GCA 90 bp TTCTCCAGAGACTTGAAGGTTTTAGGACGACCCCGTAAGAAATTCTaGATGCTATTAAGTGCATCCATAGCTGTACCTTCTACAACATCA +
Preference number: 5 (lower is better)
Translates to: FSRDLKVLGRPRKKF*MLLSASIAVPSTTS
Trigger: TGATGTTGTAGAAGGTACAGCTATGGATGCACTTAATAGCATGCAGAATTTCTTACGGGGTCGTCCTAAAACCTTCAAGTCTCTGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS TCA 90 bp CTCATCTTCTTCTTCTTCCTCTATGATTCCTTCCACTATAGATTTTaGGCCTTCTGGACTTGTAATTCCTTCACACTGTTTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LIFFFFLYDSFHYRF*AFWTCNSFTLFDLA
Trigger: GGCCAAGTCAAACAGTGTGAAGGAATTACAAGTCCAGAAGGCTCAAAATCTATAGTGGAAGGAATCATAGAGGAAGAAGAAGAAGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000535205.5
ENST00000543525.3
CDS TCA 90 bp TCATGCATAGGTCTTGCACAGAAAGGGTGCCTAGGAAAGGTTTCTTaGATTGAACTTAAGTGTCTTAGATTCAATTTCATGGCACTCATG +
Preference number: 5 (lower is better)
Translates to: SCIGLAQKGCLGKVS*IELKCLRFNFMALM
Trigger: CATGAGTGCCATGAAATTGAATCTAAGACACTTAAGTTCAATTCAAGAAACCTTTCCTAGGCACCCTTTCTGTGCAAGACCTATGCATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS TCA 90 bp TGTAAGCTCGTAACTAATGCGACAATGATTGAGAATGAACAGCGATaGCTGATAAAGAAGATCCCTAAGGAGACTAAAGGATATGAGACC +
Preference number: 5 (lower is better)
Translates to: CKLVTNATMIENEQR*LIKKIPKETKGYET
Trigger: GGTCTCATATCCTTTAGTCTCCTTAGGGATCTTCTTTATCAGTCATCGCTGTTCATTCTCAATCATTGTCGCATTAGTTACGAGCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS TCA 90 bp ACACATAAAATAACATGTTCATGGGTAATCCTCATGATTATTCTATaGGGTGGGAATATTTCCAAACTCTTCTCTCCCATTGCACAGATT +
Preference number: 5 (lower is better)
Translates to: THKITCSWVILMIIL*GGNISKLFSPIAQI
Trigger: AATCTGTGCAATGGGAGAGAAGAGTTTGGAAATATTCCCACCTCATAGAATAATCATGAGGATTACCCATGAACATGTTATTTTATGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CAA 90 bp GCCCAACCGGTCACGACTCGCTCCCCTAACGACGCCCTGTCGCCTTaGGACAGCACCCAGCTACCCGTAGCACCGCCTACCGCCCACCGG +
Preference number: 6 (lower is better)
Translates to: AQPVTTRSPNDALSP*DSTQLPVAPPTAHR
Trigger: CCGGTGGGCGGTAGGCGGTGCTACGGGTAGCTGGGTGCTGTCCAAAGGCGACAGGGCGTCGTTAGGGGAGCGAGTCGTGACCGGTTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542710.3
CDS GCA 72 bp CCATTCGCATCTTGGCTCCGCTCTGACTGCCCCCGCTaGCGGGTAGAGGTGGGCGAGAGGGAAGGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: PFASWLRSDCPR*RVEVGEREGGR
Trigger: TCGGCCGCCTTCCCTCTCGCCCACCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGAATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS GCA 72 bp CCGGGTAGAGGTGGGCGAGAGGGAAGGCGGCCGAGGTaGATGCTCTTTTCGAGGGCCGACATCGAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: PGRGGREGRRPR*MLFSRADIEGR
Trigger: CCTCCCCTCGATGTCGGCCCTCGAAAAGAGCATGCACCTCGGCCGCCTTCCCTCTCGCCCACCTCTACCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS GCA 72 bp TTCCAGGGCCCATTCGCATCTTGGCTCCGCTCTGACTaGCCCCGCTGCCGGGTAGAGGTGGGCGAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: FQGPFASWLRSD*PRCRVEVGERE
Trigger: TTCCCTCTCGCCCACCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGAATGGGCCCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS TCA 72 bp TTTCTTCCAGGGCCCATTCGCATCTTGGCTCCGCTCTaGCTGCCCCCGCTGCCGGGTAGAGGTGGGCGAGAG +
Preference number: 6 (lower is better)
Translates to: FLPGPIRILAPL*LPPLPGRGGRE
Trigger: CTCTCGCCCACCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGAATGGGCCCTGGAAGAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS CAA 72 bp GTCACGACTCGCTCCCCTAACGACGCCCTGTCGCCTTaGGACAGCACCCAGCTACCCGTAGCACCGCCTACC +
Preference number: 6 (lower is better)
Translates to: VTTRSPNDALSP*DSTQLPVAPPT
Trigger: GGTAGGCGGTGCTACGGGTAGCTGGGTGCTGTCCAAAGGCGACAGGGCGTCGTTAGGGGAGCGAGTCGTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542710.3
CDS CCA 72 bp AAAAGTCCCGCTTTCTTCCAGGGCCCATTCGCATCTTaGCTCCGCTCTGACTGCCCCCGCTGCCGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: KSPAFFQGPFAS*LRSDCPRCRVE
Trigger: CTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGAATGGGCCCTGGAAGAAAGCGGGACTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS GCA 72 bp GCAGCTGCCAGGGAGAAGTTGGAGAGCTGGTGGAACTaGATCTGCATAGGCTCCACAGCAGCTGCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: AAAREKLESWWN*ICIGSTAAAAG
Trigger: GCCTGCAGCAGCTGCTGTGGAGCCTATGCAGATGCAGTTCCACCAGCTCTCCAACTTCTCCCTGGCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CCA 72 bp CTGAGCACCAGACTCACCTTGTCAGGGGCATCCTCATaGACTGCATGGCCACACTGGGGTAGGACCTGCATC +
Preference number: 6 (lower is better)
Translates to: LSTRLTLSGASS*TAWPHWGRTCI
Trigger: GATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTGAGTCTGGTGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS GCA 72 bp GCCAGGGAGAAGTTGGAGAGCTGGTGGAACTGCATCTaGATAGGCTCCACAGCAGCTGCTGCAGGCAATGCA +
Preference number: 6 (lower is better)
Translates to: AREKLESWWNCI*IGSTAAAAGNA
Trigger: TGCATTGCCTGCAGCAGCTGCTGTGGAGCCTATGCAGATGCAGTTCCACCAGCTCTCCAACTTCTCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CCA 72 bp GCAACAGCTTCAGCTACCTTGTCAGGGGCATCCTCATaGACTGCATGGCCACACTGGGGTAGGACCTGCATC +
Preference number: 6 (lower is better)
Translates to: ATASATLSGASS*TAWPHWGRTCI
Trigger: GATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTAGCTGAAGCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000535205.5
ENST00000538501.5
ENST00000539021.1
ENST00000543525.3
CDS CCA 72 bp AGACTCACCTTGTCAGGGGCATCCTCATGGACTGCATaGCCACACTGGGGTAGGACCTGCATCTGGAACTTC +
Preference number: 6 (lower is better)
Translates to: RLTLSGASSWTA*PHWGRTCIWNF
Trigger: GAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS TCA 72 bp CCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTTaGGGAGGGGTGGACAGCAGGTCACTAACAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PLVRRIYNRARC*GGVDSRSLTAR
Trigger: CCTGGCTGTTAGTGACCTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000539021.1
ENST00000541340.5
ENST00000543525.3
CDS GCA 72 bp GCCAGGAAACACACACTGGAATCCACCGATGGGTTCTaGAAACCTGTGCCGGATCAGGAAAGTGGCAACAGC +
Preference number: 6 (lower is better)
Translates to: ARKHTLESTDGF*KPVPDQESGNS
Trigger: GCTGTTGCCACTTTCCTGATCCGGCACAGGTTTGCAGAACCCATCGGTGGATTCCAGTGTGTGTTTCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000538501.5
ENST00000539021.1
ENST00000541340.5
ENST00000543525.3
CDS CCA 72 bp CGATGGGTTCTGCAAACCTGTGCCGGATCAGGAAAGTaGCAACAGCTTCAGCTACCTTGTCAGGGGCATCCT +
Preference number: 6 (lower is better)
Translates to: RWVLQTCAGSGK*QQLQLPCQGHP
Trigger: AGGATGCCCCTGACAAGGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGCACAGGTTTGCAGAACCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000538501.5
ENST00000539021.1
ENST00000543525.3
CDS CCA 72 bp TGGACTGCATGGCCACACTGGGGTAGGACCTGCATCTaGAACTTCCCTGGAGAGGAATCAAAGCAAGGCAAC +
Preference number: 6 (lower is better)
Translates to: WTAWPHWGRTCI*NFPGEESKQGN
Trigger: GTTGCCTTGCTTTGATTCCTCTCCAGGGAAGTTCCAGATGCAGGTCCTACCCCAGTGTGGCCATGCAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CAA 72 bp GCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTaGAGGAGGGGTGGACAGCAGGTCACTAACAGCCAG +
Preference number: 6 (lower is better)
Translates to: ASGATYLQQSSM*RRGGQQVTNSQ
Trigger: CTGGCTGTTAGTGACCTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000539021.1
ENST00000541340.5
ENST00000543525.3
CDS CAA 72 bp TACGGTGCCCTCATCCCACCCACAGGTCTGAGTGGCTaGAAATTAAAAGGACCTAGGCCCTCCCTAGCAGAG +
Preference number: 6 (lower is better)
Translates to: YGALIPPTGLSG*KLKGPRPSLAE
Trigger: CTCTGCTAGGGAGGGCCTAGGTCCTTTTAATTTCAAGCCACTCAGACCTGTGGGTGGGATGAGGGCACCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CAA 90 bp GTTAGGCTCTACGGTGCCCTCATCCCACCCACAGGTCTGAGTGGCTaGAAATTAAAAGGACCTAGGCCCTCCCTAGCAGAGCTAGAAGAC +
Preference number: 6 (lower is better)
Translates to: VRLYGALIPPTGLSG*KLKGPRPSLAELED
Trigger: GTCTTCTAGCTCTGCTAGGGAGGGCCTAGGTCCTTTTAATTTCAAGCCACTCAGACCTGTGGGTGGGATGAGGGCACCGTAGAGCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS GCA 72 bp ACACACTGGAATCCACCGATGGGTTCTGCAAACCTGTaGCGGATCAGGAAAGTGGCAACAGCTTCAGCTACC +
Preference number: 6 (lower is better)
Translates to: THWNPPMGSANL*RIRKVATASAT
Trigger: GGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGCACAGGTTTGCAGAACCCATCGGTGGATTCCAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000538501.5
ENST00000539021.1
ENST00000541340.5
ENST00000543525.3
CDS CAA 90 bp ATCACAGTGGCCTCTGGTGCGACGTATTTACAACAGAGCTCGATGTaGAGGAGGGGTGGACAGCAGGTCACTAACAGCCAGGAAACACAC +
Preference number: 6 (lower is better)
Translates to: ITVASGATYLQQSSM*RRGGQQVTNSQETH
Trigger: GTGTGTTTCCTGGCTGTTAGTGACCTGCTGTCCACCCCTCCTCAACATCGAGCTCTGTTGTAAATACGTCGCACCAGAGGCCACTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000539021.1
ENST00000541340.5
ENST00000543525.3
CDS TCA 72 bp ACCTCCTCCATGCAGAAGGAGCAGGACTGGACCCTCTaGACCACTCTTGTAGACTCGAAAAGTATCCTTGCC +
Preference number: 6 (lower is better)
Translates to: TSSMQKEQDWTL*TTLVDSKSILA
Trigger: GGCAAGGATACTTTTCGAGTCTACAAGAGTGGTTCAGAGGGTCCAGTCCTGCTCCTTCTGCATGGAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000542710.3
ENST00000544401.2
CDS TCA 72 bp TGTCAACTGCCTTCAGGCAGTCTCAGGGGCCATATCTaGTTCTTCTGTCTGCCCAGCATCATGCATAGGTCT +
Preference number: 6 (lower is better)
Translates to: CQLPSGSLRGHI*FFCLPSIMHRS
Trigger: AGACCTATGCATGATGCTGGGCAGACAGAAGAATCAGATATGGCCCCTGAGACTGCCTGAAGGCAGTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS TCA 72 bp TCTCCAAGGGCTGGTTTCCAGTTCTTGCACCAATACTaGCCCATAGAAAGGGAGCAACCACTTCCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: SPRAGFQFLHQY*PIEREQPLPQA
Trigger: TGCCTGAGGAAGTGGTTGCTCCCTTTCTATGGGTCAGTATTGGTGCAAGAACTGGAAACCAGCCCTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CAA 90 bp CTCCACAGCAGCTGCTGCAGGCAATGCAGGCTGAGACTCAGAGACTaGTCTTCTGTGACATCCAGGGTTATTCTCACAGTTGTCCTTTTA +
Preference number: 6 (lower is better)
Translates to: LHSSCCRQCRLRLRD*SSVTSRVILTVVLL
Trigger: TAAAAGGACAACTGTGAGAATAACCCTGGATGTCACAGAAGACAAGTCTCTGAGTCTCAGCCTGCATTGCCTGCAGCAGCTGCTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS TCA 72 bp CCAGGGTTATTCTCACAGTTGTCCTTTTACAGTCACTaGGCACCAGACTCACCTTGTCAGGGGCATCCTCAT +
Preference number: 6 (lower is better)
Translates to: PGLFSQLSFYSH*APDSPCQGHPH
Trigger: ATGAGGATGCCCCTGACAAGGTGAGTCTGGTGCTCAGTGACTGTAAAAGGACAACTGTGAGAATAACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CAA 72 bp AGCTGCTGCAGGCAATGCAGGCTGAGACTCAGAGACTaGTCTTCTGTGACATCCAGGGTTATTCTCACAGTT +
Preference number: 6 (lower is better)
Translates to: SCCRQCRLRLRD*SSVTSRVILTV
Trigger: AACTGTGAGAATAACCCTGGATGTCACAGAAGACAAGTCTCTGAGTCTCAGCCTGCATTGCCTGCAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS TCA 72 bp TGTAATTCCTTCACACTGTTTGACTTGGCCAACCATTaGGACACGGGCAGACTCCAGATTTCGAATCTGGCC +
Preference number: 6 (lower is better)
Translates to: CNSFTLFDLANH*DTGRLQISNLA
Trigger: GGCCAGATTCGAAATCTGGAGTCTGCCCGTGTCTCAATGGTTGGCCAAGTCAAACAGTGTGAAGGAATTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000535205.5
ENST00000543525.3
CDS CCA 72 bp ACCATTGAGACACGGGCAGACTCCAGATTTCGAATCTaGCCACTCTTCACACTCCATTCAATAGCATTCTCC +
Preference number: 6 (lower is better)
Translates to: TIETRADSRFRI*PLFTLHSIAFS
Trigger: GGAGAATGCTATTGAATGGAGTGTGAAGAGTGGCCAGATTCGAAATCTGGAGTCTGCCCGTGTCTCAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000543525.3
CDS CCA 72 bp GGACCTGCATCTGGAACTTCCCTTGCATCTGGCCAATaGTCAGATCTTTATCCAATCTATCAACACCAGCCA +
Preference number: 6 (lower is better)
Translates to: GPASGTSLASGQ*SDLYPIYQHQP
Trigger: TGGCTGGTGTTGATAGATTGGATAAAGATCTGACCATTGGCCAGATGCAAGGGAAGTTCCAGATGCAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000535205.5
ENST00000538501.5
ENST00000541340.5
ENST00000543525.3
CDS TCA 72 bp CTACATAGGCTAGGACTGGATCTCAGGAGAGAGGGGTaGGGTGGATGTTTAGCTTTGGGAGTCATCAATATA +
Preference number: 6 (lower is better)
Translates to: LHRLGLDLRREG*GGCLALGVINI
Trigger: TATATTGATGACTCCCAAAGCTAAACATCCACCTCACCCCTCTCTCCTGAGATCCAGTCCTAGCCTATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS GCA 72 bp GAACACAGTGCTGGCAAAGCTGTGGTTTGGAATCTATaGAGCCTTAGCCATTTCCCTTTGTTCTGTGGAATG +
Preference number: 6 (lower is better)
Translates to: EHSAGKAVVWNL*SLSHFPLFCGM
Trigger: CATTCCACAGAACAAAGGGAAATGGCTAAGGCTGCATAGATTCCAAACCACAGCTTTGCCAGCACTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS GCA 72 bp TCAGCACATATACACAAAACCAATACCATAAGCAGCTaGCAGGGAGAAGTTGGAGAGCTGGTGGAACTGCAT +
Preference number: 6 (lower is better)
Translates to: SAHIHKTNTISS*QGEVGELVELH
Trigger: ATGCAGTTCCACCAGCTCTCCAACTTCTCCCTGGCAGCTGCTTATGGTATTGGTTTTGTGTATATGTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CCA 72 bp CGTGAAGGGCTTATGTGTGCCCTCAGAGTTACAGAATaGTGTTTTCTCACAGGAGGAGCCCATATTAATTCC +
Preference number: 6 (lower is better)
Translates to: REGLMCALRVTE*CFLTGGAHINS
Trigger: GGAATTAATATGGGCTCCTCCTGTGAGAAAACACCATTCTGTAACTCTGAGGGCACACATAAGCCCTTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541340.5
CDS CAA 90 bp GATTGGATAAGCCTCGGAACCAGCCGTCCCAGTATTTTTCTGTTTTaGCCAGTTCAATTCTCCAGGTGTATGGATGGTCTTTCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: DWISLGTSRPSIFLF*PVQFSRCMDGLSWS
Trigger: AGACCAAGAAAGACCATCCATACACCTGGAGAATTGAACTGGCAAAAACAGAAAAATACTGGGACGGCTGGTTCCGAGGCTTATCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000535205.5
ENST00000538501.5
ENST00000541340.5
ENST00000543525.3
CDS TCA 72 bp CCAGGATTGTCTGATTCCAAGGCTGGTGATCAACAATaGTTTCAAATGCTATCCCAGTCCATGTCAACTGCC +
Preference number: 6 (lower is better)
Translates to: PGLSDSKAGDQQ*FQMLSQSMSTA
Trigger: GGCAGTTGACATGGACTGGGATAGCATTTGAAATCATTGTTGATCACCAGCCTTGGAATCAGACAATCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS TCA 72 bp CCCAAGGCCACTTCATTAATTAGTGGAGGAATAAGATaGTCCCATTTAGTAAAGTCCATCCTGTGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: PKATSLISGGIR*SHLVKSILCPS
Trigger: GGAGGGGCACAGGATGGACTTTACTAAATGGGATCATCTTATTCCTCCACTAATTAATGAAGTGGCCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS GCA 72 bp ACAATGATTTCAAATGCTATCCCAGTCCATGTCAACTaGCTTCAGGCAGTCTCAGGGGCCATATCTGATTCT +
Preference number: 6 (lower is better)
Translates to: TMISNAIPVHVN*LQAVSGAISDS
Trigger: AGAATCAGATATGGCCCCTGAGACTGCCTGAAGGCAGTTGACATGGACTGGGATAGCATTTGAAATCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS GCA 72 bp CTGATTCCAAGGCTGGTGATCAACAATGATTTCAAATaGTATCCCAGTCCATGTCAACTGCCTTCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: LIPRLVINNDFK*YPSPCQLPSGS
Trigger: ACTGCCTGAAGGCAGTTGACATGGACTGGGATAGCATTTGAAATCATTGTTGATCACCAGCCTTGGAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 72 bp AGTTGGTTTGAACACAGTGCTGGCAAAGCTGTGGTTTaGAATCTATGCAGCCTTAGCCATTTCCCTTTGTTC +
Preference number: 6 (lower is better)
Translates to: SWFEHSAGKAVV*NLCSLSHFPLF
Trigger: GAACAAAGGGAAATGGCTAAGGCTGCATAGATTCCAAACCACAGCTTTGCCAGCACTGTGTTCAAACCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 72 bp AAGTCAGTTGGTTTGAACACAGTGCTGGCAAAGCTGTaGTTTGGAATCTATGCAGCCTTAGCCATTTCCCTT +
Preference number: 6 (lower is better)
Translates to: KSVGLNTVLAKL*FGIYAALAISL
Trigger: AAGGGAAATGGCTAAGGCTGCATAGATTCCAAACCACAGCTTTGCCAGCACTGTGTTCAAACCAACTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CAA 90 bp GGCAAAGCTGTGGTTTGGAATCTATGCAGCCTTAGCCATTTCCCTTaGTTCTGTGGAATGTTCCTTATCCTCGCCATTTACTCTCTATAC +
Preference number: 6 (lower is better)
Translates to: GKAVVWNLCSLSHFP*FCGMFLILAIYSLY
Trigger: GTATAGAGAGTAAATGGCGAGGATAAGGAACATTCCACAGAACAAAGGGAAATGGCTAAGGCTGCATAGATTCCAAACCACAGCTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS GCA 72 bp GACTTGAAGGTTTTAGGACGACCCCGTAAGAAATTCTaGATGCTATTAAGTGCATCCATAGCTGTACCTGGA +
Preference number: 6 (lower is better)
Translates to: DLKVLGRPRKKF*MLLSASIAVPG
Trigger: TCCAGGTACAGCTATGGATGCACTTAATAGCATGCAGAATTTCTTACGGGGTCGTCCTAAAACCTTCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543525.3
CDS CCA 72 bp GCTCTGATGACTAGGGACGCATTTGTCCTTCCTCTTTaGAAGAGTAGGTATAATCAGAGAGAACTCACATAC +
Preference number: 6 (lower is better)
Translates to: ALMTRDAFVLPL*KSRYNQRELTY
Trigger: GTATGTGAGTTCTCTCTGATTATACCTACTCTTCCAAAGAGGAAGGACAAATGCGTCCCTAGTCATCAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CAA 72 bp CTCTTCACACTCCATTCAATAGCATTCTCCAGAGACTaGAAGGTTTTAGGACGACCCCGTAAGAAATTCTGC +
Preference number: 6 (lower is better)
Translates to: LFTLHSIAFSRD*KVLGRPRKKFC
Trigger: GCAGAATTTCTTACGGGGTCGTCCTAAAACCTTCAAGTCTCTGGAGAATGCTATTGAATGGAGTGTGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000543525.3
CDS CAA 72 bp TATGAGGTGGGAATATTTCCAAACTCTTCTCTCCCATaGCACAGATTAGGAGCCTTAGGTTCAGAGAGCCTA +
Preference number: 6 (lower is better)
Translates to: YEVGIFPNSSLP*HRLGALGSESL
Trigger: TAGGCTCTCTGAACCTAAGGCTCCTAATCTGTGCAATGGGAGAGAAGAGTTTGGAAATATTCCCACCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CAA 90 bp ATCTGGCCACTCTTCACACTCCATTCAATAGCATTCTCCAGAGACTaGAAGGTTTTAGGACGACCCCGTAAGAAATTCTGCATGCTATTA +
Preference number: 6 (lower is better)
Translates to: IWPLFTLHSIAFSRD*KVLGRPRKKFCMLL
Trigger: TAATAGCATGCAGAATTTCTTACGGGGTCGTCCTAAAACCTTCAAGTCTCTGGAGAATGCTATTGAATGGAGTGTGAAGAGTGGCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328257.13
ENST00000398427.6
ENST00000543525.3
CDS GCA 72 bp GACTTGAAGGTTTTAGGACGACCCCGTAAGAAATTCTaGATGCTATTAAGTGCATCCATAGCTGTACCTTCT +
Preference number: 6 (lower is better)
Translates to: DLKVLGRPRKKF*MLLSASIAVPS
Trigger: AGAAGGTACAGCTATGGATGCACTTAATAGCATGCAGAATTTCTTACGGGGTCGTCCTAAAACCTTCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328257.13
ENST00000398427.6
CDS CCA 72 bp TCTGTTTTTGCCAGTTCAATTCTCCAGGTGTATGGATaGTCTTTCTTGGTCTGGAGGAATAAGAGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: SVFASSILQVYG*SFLVWRNKSKF
Trigger: GAACTTGCTCTTATTCCTCCAGACCAAGAAAGACCATCCATACACCTGGAGAATTGAACTGGCAAAAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398427.6
CDS CAA 90 bp CCATTTCCAACCTCACCTCAATACTCTGGACCCAATTATCAAGTCTaGCTGAGGATGGTAATACAAGTAATTGTAACCTTGCGCCAATCA +
Preference number: 6 (lower is better)
Translates to: PFPTSPQYSGPNYQV*LRMVIQVIVTLRQS
Trigger: TGATTGGCGCAAGGTTACAATTACTTGTATTACCATCCTCAGCAAGACTTGATAATTGGGTCCAGAGTATTGAGGTGAGGTTGGAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 72 bp TCTGTTTTTGCCAGTTCAATTCTCCAGGTGTATGGATaGTCTTTCTTGGTCTCCATGTCATCTTCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: SVFASSILQVYG*SFLVSMSSSFF
Trigger: GAAAAAGGAAGATGACATGGAGACCAAGAAAGACCATCCATACACCTGGAGAATTGAACTGGCAAAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000535205.5
ENST00000538501.5
ENST00000541340.5
ENST00000543525.3
CDS CCA 72 bp CCAGGAGTGTGTCATTTCCATAAGAACAGGGGACAATaGTGTTATTACTTGCTCTATATCCCTAATAAGACC +
Preference number: 6 (lower is better)
Translates to: PGVCHFHKNRGQ*CYYLLYIPNKT
Trigger: GGTCTTATTAGGGATATAGAGCAAGTAATAACACCATTGTCCCCTGTTCTTATGGAAATGACACACTCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 72 bp AATGGGCTTGAAAGTTCTTCTGGTCATTACATCCTGTaGTTCTTACCCCAGTTACGCAGGATTCAAAAGTTT +
Preference number: 6 (lower is better)
Translates to: NGLESSSGHYIL*FLPQLRRIQKF
Trigger: AAACTTTTGAATCCTGCGTAACTGGGGTAAGAACCACAGGATGTAATGACCAGAAGAACTTTCAAGCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 72 bp ATGCAGCATGTCATTCCTATGATAAAACTGGCTACATaGGGCTGTAAGAGCATAAGAAAGGGAACTTCACAA +
Preference number: 6 (lower is better)
Translates to: MQHVIPMIKLAT*GCKSIRKGTSQ
Trigger: TTGTGAAGTTCCCTTTCTTATGCTCTTACAGCCCCATGTAGCCAGTTTTATCATAGGAATGACATGCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CAA 72 bp CTAAAACTTAACAATCATCCTGGTAGGAGGATAGAATaGTGCATTTCCAGGGCTGTGGAAAATCATGGCCAA +
Preference number: 6 (lower is better)
Translates to: LKLNNHPGRRIE*CISRAVENHGQ
Trigger: TTGGCCATGATTTTCCACAGCCCTGGAAATGCACAATTCTATCCTCCTACCAGGATGATTGTTAAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538501.5
ENST00000541340.5
CDS CAA 72 bp GTAGTTTTCCAGGATTTCATAACTAAGTCAGTTGGTTaGAACACAGTGCTGGCAAAGCTGTGGTTTGGAATC +
Preference number: 6 (lower is better)
Translates to: VVFQDFITKSVG*NTVLAKLWFGI
Trigger: GATTCCAAACCACAGCTTTGCCAGCACTGTGTTCAAACCAACTGACTTAGTTATGAAATCCTGGAAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CAA 90 bp TATGGATGGTCTTTCTTGGTCTCCATGTCATCTTCCTTTTTCCTCTaGCTTATAGACTCACTTCCTTCCTCATCTTCTTCTTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: YGWSFLVSMSSSFFL*LIDSLPSSSSSSSS
Trigger: AGAGGAAGAAGAAGAAGATGAGGAAGGAAGTGAGTCTATAAGCAAGAGGAAAAAGGAAGATGACATGGAGACCAAGAAAGACCATCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000535205.5
ENST00000538501.5
ENST00000541340.5
ENST00000543525.3
CDS CAA 90 bp TCTGTTTTTGCCAGTTCAATTCTCCAGGTGTATGGATGGTCTTTCTaGGTCTCCATGTCATCTTCCTTTTTCCTCTTGCTTATAGACTCA +
Preference number: 6 (lower is better)
Translates to: SVFASSILQVYGWSF*VSMSSSFFLLLIDS
Trigger: TGAGTCTATAAGCAAGAGGAAAAAGGAAGATGACATGGAGACCAAGAAAGACCATCCATACACCTGGAGAATTGAACTGGCAAAAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328257.13
ENST00000535205.5
ENST00000538501.5
ENST00000541340.5
ENST00000543525.3
CDS CAA 72 bp ACCTCACCTCAATACTCTGGACCCAATTATCAAGTCTaGCTGAGGATGGTAATACAAGTAATTGTAACCTTG +
Preference number: 6 (lower is better)
Translates to: TSPQYSGPNYQV*LRMVIQVIVTL
Trigger: CAAGGTTACAATTACTTGTATTACCATCCTCAGCAAGACTTGATAATTGGGTCCAGAGTATTGAGGTGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS TCA 72 bp GTAACTAATGCGACAATGATTGAGAATGAACAGCGATaGCTGATAAAGAAGATCCCTAAGGAGACTAAAGGA +
Preference number: 6 (lower is better)
Translates to: VTNATMIENEQR*LIKKIPKETKG
Trigger: TCCTTTAGTCTCCTTAGGGATCTTCTTTATCAGTCATCGCTGTTCATTCTCAATCATTGTCGCATTAGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS CCA 72 bp ATGTTCATGGGTAATCCTCATGATTATTCTATGAGGTaGGAATATTTCCAAACTCTTCTCTCCCATTGCACA +
Preference number: 6 (lower is better)
Translates to: MFMGNPHDYSMR*EYFQTLLSHCT
Trigger: TGTGCAATGGGAGAGAAGAGTTTGGAAATATTCCCACCTCATAGAATAATCATGAGGATTACCCATGAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1
CDS TCA 72 bp ATAACATGTTCATGGGTAATCCTCATGATTATTCTATaGGGTGGGAATATTTCCAAACTCTTCTCTCCCATT +
Preference number: 6 (lower is better)
Translates to: ITCSWVILMIIL*GGNISKLFSPI
Trigger: AATGGGAGAGAAGAGTTTGGAAATATTCCCACCTCATAGAATAATCATGAGGATTACCCATGAACATGTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539021.1