RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPM1D (Homo sapiens)

Ensembl gene IDs: ENSG00000170836

Ensembl transcript IDs: ENST00000305921.8, ENST00000392995.7, ENST00000590418.1, ENST00000629650.2

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTGCCATGTTGTaGGAGGCCCTCTGGAGGGGAACATGTGGCAACAAACTGAGGTCT +
Preference number: 1 (lower is better)
Translates to: ALRCCLLWGQITAML*EALWRGTCGNKLRS
Trigger: AGACCTCAGTTTGTTGCCACATGTTCCCCTCCAGAGGGCCTCTCACAACATGGCAGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR TCA 90 bp GAGGGGAACATGTGGCAACAAACTGAGGTCTCCTGCCAACAGCTGTaGGTCTTGCGGGAAGCAGATCTTCTAGCCCCAATGACACCTTCG +
Preference number: 1 (lower is better)
Translates to: EGNMWQQTEVSCQQL*VLREADLLAPMTPS
Trigger: CGAAGGTGTCATTGGGGCTAGAAGATCTGCTTCCCGCAAGACTCACAGCTGTTGGCAGGAGACCTCAGTTTGTTGCCACATGTTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR TCA 90 bp TTAACAGAGTTCTTTCGCTGTGAGGTTGTGGGGAGACTTGCAGGCTaGGCACCACTACTTCGACTTAAGCCATTTCGTCTATGCTTCTTC +
Preference number: 1 (lower is better)
Translates to: LTEFFRCEVVGRLAG*APLLRLKPFRLCFF
Trigger: GAAGAAGCATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCACAACCTCACAGCGAAAGAACTCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR TCA 90 bp CCAAAACCACGAGACTATCACCCAGCTAAACCACTCTCAGATTTCTaGGGCTCAGAAACTGGAGATAATATTTGTTGTTTTAAACTGCTA +
Preference number: 1 (lower is better)
Translates to: PKPRDYHPAKPLSDF*GSETGDNICCFKLL
Trigger: TAGCAGTTTAAAACAACAAATATTATCTCCAGTTTCTGAGCCTCAGAAATCTGAGAGTGGTTTAGCTGGGTGATAGTCTCGTGGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTAGCTACTCAGGAGGCTaGGGCAGGAGAATCGCAGGA +
Preference number: 2 (lower is better)
Translates to: HHGFFLALRCCLLWGQITSYSGG*GRRIAG
Trigger: TCCTGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCT...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR GCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCCAGAAGGCAGAGGTTaGAGGGAGCCGAGATCACAC +
Preference number: 2 (lower is better)
Translates to: HHGFFLALRCCLLWGQITPEGRG*REPRSH
Trigger: GTGTGATCTCGGCTCCCTGCAACCTCTGCCTTCTGG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCCACTCTCAGATTTCTaGGGCTCAGAAACTGGAGAT +
Preference number: 2 (lower is better)
Translates to: HHGFFLALRCCLLWGQITPLSDF*GSETGD
Trigger: ATCTCCAGTTTCTGAGCCTCAGAAATCTGAGAGTGG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATCCTGCCAACAGCTGTaGGTCTTGCGGGAAGCAGAT +
Preference number: 2 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVSCQQL*VLREAD
Trigger: ATCTGCTTCCCGCAAGACTCACAGCTGTTGGCAGGA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACATGTGGCAACAAACTaGGGTCTCCTGCCAACAGCT +
Preference number: 2 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVHVATN*GLLPTA
Trigger: AGCTGTTGGCAGGAGACCTCAGTTTGTTGCCACATG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCAGGAGGCTGAGACATaGAAATCACTTGAACTGAAA +
Preference number: 2 (lower is better)
Translates to: HHGFFLALRCCLLWGQITQEAET*KSLELK
Trigger: TTTCAGTTCAAGTGATTTTCATGTCTCAGCCTCCTG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATCATGACAGTGTTTGTTaGATTAGTAGGCACAAGGCC +
Preference number: 2 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYHDSVC*ISRHKA
Trigger: GGCCTTGTGCCTACTAATTCAACAAACACTGTCATG...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR TCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATGATCTTTTGAGGGTATaGCTACACCTTGGACATTCT +
Preference number: 2 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYDLLRV*LHLGHS
Trigger: AGAATGTCCAAGGTGTAGTCATACCCTCAAAAGATC...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCCGGGAGGCAGAGGTTaGAGTCAGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: SKENFTYFKQTREGSNYFPGGRG*SQPRSR
Trigger: GCGTGATCTCGGCTGACTGCAACCTCTGCCTCCCGG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAACTCACTGTAAAGCATaGTCATGGCACAACAGAATG +
Preference number: 2 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVTHCKA*SWHNRM
Trigger: CATTCTGTTGTGCCATGATCATGCTTTACAGTGAGT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAAGCATGACTGACATGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVSMTDM*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACATGTCAGTCATGCT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTAATAACCAGAATGTGTaGACATGGTTAAATAATGGC +
Preference number: 2 (lower is better)
Translates to: HHGFFLALRCCLLWGQITNNQNV*TWLNNG
Trigger: GCCATTATTTAACCATGTCCACACATTCTGGTTATT...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCCGAGATCACGCCACTaGACTCTAGCCTGGATGACA +
Preference number: 2 (lower is better)
Translates to: SKENFTYFKQTREGSNYFPRSRH*TLAWMT
Trigger: TGTCATCCAGGCTAGAGTGCAGTGGCGTGATCTCGG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR CAA 90 bp CTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAGTTGACTaGGTCTGTGTGACCAACAAAATACAGAATTGGTATGACACTTTC +
Preference number: 2 (lower is better)
Translates to: LEFMPCVGVSHVVVD*VCVTNKIQNWYDTF
Trigger: GAAAGTGTCATACCAATTCTGTATTTTGTTGGTCACACAGACCAAGTCAACTACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACTCATTAGAGCATTTTaGATTTCAGATTGGGAACAC +
Preference number: 2 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVLIRAF*ISDWEH
Trigger: GTGTTCCCAATCTGAAATTCAAAATGCTCTAATGAG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR CCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTTTCCAATTTTCTTCTaGCCCCTAAGTCTGCGTCGC +
Preference number: 2 (lower is better)
Translates to: SFPRCISANTNSFPVLMKFPIFF*PLSLRR
Trigger: GCGACGCAGACTTAGGGGCCAGAAGAAAATTGGAAA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR TCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTGGTTCTGGATCTTTTaGGGGTATGACTACACCTTG +
Preference number: 2 (lower is better)
Translates to: SFPRCISANTNSFPVLMKWFWIF*GYDYTL
Trigger: CAAGGTGTAGTCATACCCTCAAAAGATCCAGAACCA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAAACAAAATACAGAATTaGTATGACACTTTCAGAGGC +
Preference number: 2 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVNKIQN*YDTFRG
Trigger: GCCTCTGAAAGTGTCATACCAATTCTGTATTTTGTT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR CCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTCAGGGGGCCAGAATTaGACTCTTCTAATGTCCTTT +
Preference number: 2 (lower is better)
Translates to: SFPRCISANTNSFPVLMKSGGQN*TLLMSF
Trigger: AAAGGACATTAGAAGAGTCCAATTCTGGCCCCCTGA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTTAGTGCTGTACACATaGCTGGCATTCAGATTAGTA +
Preference number: 2 (lower is better)
Translates to: SFPRCISANTNSFPVLMKLVLYT*LAFRLV
Trigger: TACTAATCTGAATGCCAGCCATGTGTACAGCACTAA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTGGTATGACTACACCTTaGACATTCTCTCGAGCTATC +
Preference number: 2 (lower is better)
Translates to: SKENFTYFKQTREGSNYFGMTTP*TFSRAI
Trigger: GATAGCTCGAGAGAATGTCCAAGGTGTAGTCATACC...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGAGGCACAAGGCCAATTaGAAGGCTATTATTCAAAGA +
Preference number: 2 (lower is better)
Translates to: SFPRCISANTNSFPVLMKRHKAN*KAIIQR
Trigger: TCTTTGAATAATAGCCTTCCAATTGGCCTTGTGCCT...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTCTTGGGCTTTCATTTaGCCAGGAGTTGACATCTTC +
Preference number: 2 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSWAFI*PGVDIF
Trigger: GAAGATGTCAACTCCTGGCCAAATGAAAGCCCAAGA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR CAA 90 bp TTCAACATCGGCACCAAATTTAAAAAGCCCTCTTATATCCTAAGTTaGGAAAAACCTCATTTCCCAGATGCATTTCAGCAAACACAAACA +
Preference number: 2 (lower is better)
Translates to: FNIGTKFKKPSYILS*EKPHFPDAFQQTQT
Trigger: TGTTTGTGTTTGCTGAAATGCATCTGGGAAATGAGGTTTTTCCAAACTTAGGATATAAGAGGGCTTTTTAAATTTGGTGCCGATGTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTACCTCATTTCCCAGATaGATTTCAGCAAACACAAAC +
Preference number: 2 (lower is better)
Translates to: SKENFTYFKQTREGSNYFTSFPR*ISANTN
Trigger: GTTTGTGTTTGCTGAAATGCATCTGGGAAATGAGGT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGCCTTTTAAAGTTTGTTaGAGGGGTTCTTTCAATTTC +
Preference number: 2 (lower is better)
Translates to: SFPRCISANTNSFPVLMKPFKVC*RGSFNF
Trigger: GAAATTGAAAGAACCCCTCCAACAAACTTTAAAAGG...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCACTTCCTTCTATGCTaGAGATTTAGTAAGCATATC +
Preference number: 2 (lower is better)
Translates to: SKENFTYFKQTREGSNYFHFLLC*RFSKHI
Trigger: GATATGCTTACTAAATCTTCAGCATAGAAGGAAGTG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
3UTR-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTAGCACCATCTGTTATTaGAATAGCAAGGAAAACTTC +
Preference number: 2 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSTICY*NSKENF
Trigger: GAAGTTTTCCTTGCTATTTCAATAACAGATGGTGCT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
3UTR-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTAGACTAACTGTAGCATaGCTCAACACTTCTATGAAA +
Preference number: 2 (lower is better)
Translates to: SKENFTYFKQTREGSNYFRLTVA*LNTSMK
Trigger: TTTCATAGAAGTGTTGAGCCATGCTACAGTTAGTCT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
3UTR GCA 72 bp TGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTaGCATGTTGTGAGAGGCCCTCTGGAGGGGAACATG +
Preference number: 3 (lower is better)
Translates to: CPPVLLALGTNN*HVVRGPLEGNM
Trigger: CATGTTCCCCTCCAGAGGGCCTCTCACAACATGGCAGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR CAA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTTGTAATCCCAGTACTTaGGGAGGTCGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: HHGFFLALRCCLLWGQITCNPST*GGRGGW
Trigger: CCACCCGCCTCGACCTCCCAAAGTACTGGGATTACA...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR TCA 72 bp ATGTGGCAACAAACTGAGGTCTCCTGCCAACAGCTGTaGGTCTTGCGGGAAGCAGATCTTCTAGCCCCAATG +
Preference number: 3 (lower is better)
Translates to: MWQQTEVSCQQL*VLREADLLAPM
Trigger: CATTGGGGCTAGAAGATCTGCTTCCCGCAAGACTCACAGCTGTTGGCAGGAGACCTCAGTTTGTTGCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR TCA 72 bp TGTTGCTTGCTCTGGGGACAAATAACTGCCATGTTGTaGGAGGCCCTCTGGAGGGGAACATGTGGCAACAAA +
Preference number: 3 (lower is better)
Translates to: CCLLWGQITAML*EALWRGTCGNK
Trigger: TTTGTTGCCACATGTTCCCCTCCAGAGGGCCTCTCACAACATGGCAGTTATTTGTCCCCAGAGCAAGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR CCA 72 bp TCTGAGAAGGCATTGCTACGAACCAGGGCAGGTATATaGTCCTTAGAATTCACCCTTGGCCATGGATCCTCC +
Preference number: 3 (lower is better)
Translates to: SEKALLRTRAGI*SLEFTLGHGSS
Trigger: GGAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGTAGCAATGCCTTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAATCATGGCTTCTTCCTaGCCCTCCGGTGTTGCTTGC +
Preference number: 3 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVIMASS*PSGVAC
Trigger: GCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGAT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR TCA 72 bp TTCTTTCGCTGTGAGGTTGTGGGGAGACTTGCAGGCTaGGCACCACTACTTCGACTTAAGCCATTTCGTCTA +
Preference number: 3 (lower is better)
Translates to: FFRCEVVGRLAG*APLLRLKPFRL
Trigger: TAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCACAACCTCACAGCGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATTCTGGGGAGAGAGATaGAGGCAGGAGAATCACTTG +
Preference number: 3 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVFWGER*RQENHL
Trigger: CAAGTGATTCTCCTGCCTCAATCTCTCTCCCCAGAA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAGAGATCAAGACCATCTaGGCCAACATGATGAAAACC +
Preference number: 3 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVEIKTI*ANMMKT
Trigger: GGTTTTCATCATGTTGGCCAAGATGGTCTTGATCTC...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR-3UTR CAA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTCTTTCGCTGTGAGGTaGTGGGGAGACTTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: SFPRCISANTNSFPVLMKSFAVR*WGDLQA
Trigger: AGCCTGCAAGTCTCCCCACAACCTCACAGCGAAAGA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR CCA 72 bp AGTGGTTCTGGATCTTTTGAGGGTATGACTACACCTTaGACATTCTCTCGAGCTATCTCAGCTGAAACCTCT +
Preference number: 3 (lower is better)
Translates to: SGSGSFEGMTTP*TFSRAISAETS
Trigger: AGAGGTTTCAGCTGAGATAGCTCGAGAGAATGTCCAAGGTGTAGTCATACCCTCAAAAGATCCAGAACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR-3UTR CAA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTTCTCTGAGAAGGCATaGCTACGAACCAGGGCAGGT +
Preference number: 3 (lower is better)
Translates to: SFPRCISANTNSFPVLMKFSEKA*LRTRAG
Trigger: ACCTGCCCTGGTTCGTAGCAATGCCTTCTCAGAGAA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR TCA 72 bp AATTTTCTTCAAGTGGTTCTGGATCTTTTGAGGGTATaGCTACACCTTGGACATTCTCTCGAGCTATCTCAG +
Preference number: 3 (lower is better)
Translates to: NFLQVVLDLLRV*LHLGHSLELSQ
Trigger: CTGAGATAGCTCGAGAGAATGTCCAAGGTGTAGTCATACCCTCAAAAGATCCAGAACCACTTGAAGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
3UTR TCA 72 bp CGAGACTATCACCCAGCTAAACCACTCTCAGATTTCTaGGGCTCAGAAACTGGAGATAATATTTGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: RDYHPAKPLSDF*GSETGDNICCF
Trigger: AAAACAACAAATATTATCTCCAGTTTCTGAGCCTCAGAAATCTGAGAGTGGTTTAGCTGGGTGATAGTCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCGCCTCCCGCCCGCCGTaGCCGTCGCACACGGCGAAA +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILASRPP*PSHTAK
Trigger: TTTCGCCGTGTGCGACGGGCACGGCGGGCGGGAGGC...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCTTGTCCGCGAGAGCTaGGCCGGAGCGCCGGAGCGA +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITLVRES*AGAPER
Trigger: TCGCTCCGGCGCTCCGGCCCAGCTCTCGCGGACAAG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCAGTACAGCCCCGCCATaGCCGGCTGGCCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILSTAPP*PAGRDP
Trigger: GGGATCCCGGCCAGCCGGCCATGGCGGGGCTGTACT...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTGGGGCGCGCGATGTCTaGACTTGTCCGCGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITGARDV*TCPREL
Trigger: CAGCTCTCGCGGACAAGTCCAGACATCGCGCGCCCC...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTGCTCGGAGCATACGCTaGCTCCAGCGGCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITARSIR*LQRPNA
Trigger: AGCATTGGGCCGCTGGAGGCAGCGTATGCTCCGAGC...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATTCGGGCTGCCACCGCTaGGCCTTTCCCCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYSGCHR*AFPRDF
Trigger: GAAGTCTCGGGGAAAGGCCCAGCGGTGGCAGCCCGA...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTTACTTCCTCCCGCCCTaGTCGGAGAAGACGCTCACT +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITYFLPP*SEKTLT
Trigger: AGTGAGCGTCTTCTCCGACCAGGGCGGGAGGAAGTA...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATCGGGCTGCCACCGCTaGGCCTTTCCCCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVSGCHR*AFPRDF
Trigger: GAAGTCTCGGGGAAAGGCCCAGCGGTGGCAGCCCGA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCTCCAAGAACCACCCCTaGGTCACCTACGTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILSKNHP*VTYVSY
Trigger: GTAGCTCACGTAGGTGACTCAGGGGTGGTTCTTGGA...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCGGGAGACTTGCAGGCTaGGCACCACTACTTCGACTT +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILGRLAG*APLLRL
Trigger: AAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCC...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCCGAGATCACGCCACTaGACTCTAGCCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITPRSRH*TLAWMT
Trigger: TGTCATCCAGGCTAGAGTGCAGTGGCGTGATCTCGG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCTTGGTCCTGGCACATTaGGATGGCATCTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILLVLAH*DGILWW
Trigger: CCACCACAAGATGCCATCTCAATGTGCCAGGACCAA...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTGGCACTAGTGTTATCTaGTCGGAGCATACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITGTSVI*SEHTLP
Trigger: AGGCAGCGTATGCTCCGAGCAGATAACACTAGTGCC...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATGGTTGTGGGGAGACTTaGAGGCTGAGCACCACTACT +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYGCGET*RLSTTT
Trigger: AGTAGTGGTGCTCAGCCTGCAAGTCTCCCCACAACC...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCTGGAGGGGAACATGTaGCAACAAACTGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITLEGNM*QQTEVS
Trigger: GGAGACCTCAGTTTGTTGCCACATGTTCCCCTCCAG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTTTCCACATGGCAAGGTaGCAAGCGAGAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITFHMAR*QARKPL
Trigger: CAAAGGCTTTCTCGCTTGTCACCTTGCCATGTGGAA...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCCTAACAGGTCCATTGTaGGTGAGTCGAGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILLTGPL*VSRGRF
Trigger: GAAACGACCTCGACTCACTCACAATGGACCTGTTAG...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCAGCCTCCTTCCAGATaGCACTTAAAAATGCCCACC +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITQPPSR*HLKMPT
Trigger: GGTGGGCATTTTTAAGTGTCATCTGGAAGGAGGCTG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTGCCTCCCGCCCGCCGTaGCCGTCGCACACGGCGAAA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFASRPP*PSHTAK
Trigger: TTTCGCCGTGTGCGACGGGCACGGCGGGCGGGAGGC...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCTCCCGGGCAAACTGTaGCGCCTCCCGCCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFLPGKL*RLPPAV
Trigger: CACGGCGGGCGGGAGGCGGCACAGTTTGCCCGGGAG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR GCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTTCTCTGAGAAGGCATTaGTACGAACCAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITSLRRH*YEPGQV
Trigger: TACCTGCCCTGGTTCGTAGCAATGCCTTCTCAGAGA...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAACTGGCAGTTGTCCCTaGTGTGCTAGGAAGACCCGT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVTGSCP*CARKTR
Trigger: ACGGGTCTTCCTAGCACATCAGGGACAACTGCCAGT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCCTGAGTCACCTACGTaGGCTACATACATCTTCATG +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITPESPT*ATYIFM
Trigger: CATGAAGATGTATGTAGCTCACGTAGGTGACTCAGG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCCCTGAGTCACCTACGTaGGCTACATACATCTTCATG +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILPESPT*ATYIFM
Trigger: CATGAAGATGTATGTAGCTCACGTAGGTGACTCAGG...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAATAACTGCCATGTTGTaGGAGGCCCTCTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVITAML*EALWRG
Trigger: TCCCCTCCAGAGGGCCTCTCACAACATGGCAGTTAT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTGAGGTGAAACCCTTCTaGTTCTTGATGAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITEVKPF*FLMKPH
Trigger: GTGGGGTTTCATCAAGAAGCAGAAGGGTTTCACCTC...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCGAGGTGAAACCCTTCTaGTTCTTGATGAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILEVKPF*FLMKPH
Trigger: GTGGGGTTTCATCAAGAAGCAGAAGGGTTTCACCTC...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAGGTTGTGGGGAGACTTaGAGGCTGAGCACCACTACT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVGCGET*RLSTTT
Trigger: AGTAGTGGTGCTCAGCCTGCAAGTCTCCCCACAACC...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTAGTACAGCCCCGCCATaGCCGGCTGGCCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSTAPP*PAGRDP
Trigger: GGGATCCCGGCCAGCCGGCCATGGCGGGGCTGTACT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCCAGTTTCTTCCACATaGCAAGGTGACAAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITPVSST*QGDKRE
Trigger: TTCTCGCTTGTCACCTTGCCATGTGGAAGAAACTGG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATGGAAGTTCTGGCTTATaGTCCTGTGTCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYGSSGL*SCVTST
Trigger: TGTGGAGGTGACACAGGACCATAAGCCAGAACTTCC...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCTTCCTTGGGAAGTTCTaGCTTATGGTCCTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILFLGKF*LMVLCH
Trigger: GTGACACAGGACCATAAGCCAGAACTTCCCAAGGAA...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCCTGGCACATTGAGATaGCATCTTGTGGTGGAATCA +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITPGTLR*HLVVES
Trigger: TGATTCCACCACAAGATGCCATCTCAATGTGCCAGG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCCCTGGCACATTGAGATaGCATCTTGTGGTGGAATCA +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILPGTLR*HLVVES
Trigger: TGATTCCACCACAAGATGCCATCTCAATGTGCCAGG...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTTTCTCCTCTTGGTCCTaGCACATTGAGATGGCATCT +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITFSSWS*HIEMAS
Trigger: AGATGCCATCTCAATGTGCCAGGACCAAGAGGAGAA...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTTTTCCAATTTTCTTCTaGCCCCTAAGTCTGCGTCGC +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITFPIFF*PLSLRR
Trigger: GCGACGCAGACTTAGGGGCCAGAAGAAAATTGGAAA...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATCCTTCGGGTCATCCTaGATTCCAAGAACCACCCCT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVSFGSS*IPRTTP
Trigger: AGGGGTGGTTCTTGGAATTCAGGATGACCCGAAGGA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATCACCTCCACAGCTCTaGCAAAGTCATCCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVSPPQL*QSHPSG
Trigger: ACCCGAAGGATGACTTTGTCAGAGCTGTGGAGGTGA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTTTGGTAAAGTTTCCCTaGTTGTCCACTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITLVKFP*LSTSGE
Trigger: CTCTCCAGAAGTGGACAATCAGGGAAACTTTACCAA...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCCCACAAATCACCAAGTaGTCTTGCTACTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILPQITK*SCYCQK
Trigger: TTTCTGGCAGTAGCAAGAGCACTTGGTGATTTGTGG...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACTTGCCCTCCGGTGTTaGTTGCTCTGGGGACAAATA +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVLALRC*LLWGQI
Trigger: TATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATCCAGTTTCTTCCACATaGCAAGGTGACAAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYPVSST*QGDKRE
Trigger: TTCTCGCTTGTCACCTTGCCATGTGGAAGAAACTGG...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATTTCTCCTCTTGGTCCTaGCACATTGAGATGGCATCT +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYFSSWS*HIEMAS
Trigger: AGATGCCATCTCAATGTGCCAGGACCAAGAGGAGAA...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTACCAGGGCAGGTATATaGTCCTTAGAATTCACCCTT +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITTRAGI*SLEFTL
Trigger: AAGGGTGAATTCTAAGGACCATATACCTGCCCTGGT...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCACCAGGGCAGGTATATaGTCCTTAGAATTCACCCTT +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILTRAGI*SLEFTL
Trigger: AAGGGTGAATTCTAAGGACCATATACCTGCCCTGGT...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAGGCTCCACAACGATTTaGGTAACGTCCTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVGSTTI*VTSSMY
Trigger: GTACATGGAGGACGTTACTCAAATCGTTGTGGAGCC...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACTAACAGGTCCATTGTaGGTGAGTCGAGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVLTGPL*VSRGRF
Trigger: GAAACGACCTCGACTCACTCACAATGGACCTGTTAG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATTTGGTAAAGTTTCCCTaGTTGTCCACTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYLVKFP*LSTSGE
Trigger: CTCTCCAGAAGTGGACAATCAGGGAAACTTTACCAA...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTGATCTTTTGAGGGTATaGCTACACCTTGGACATTCT +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITDLLRV*LHLGHS
Trigger: AGAATGTCCAAGGTGTAGTCATACCCTCAAAAGATC...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCGATCTTTTGAGGGTATaGCTACACCTTGGACATTCT +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILDLLRV*LHLGHS
Trigger: AGAATGTCCAAGGTGTAGTCATACCCTCAAAAGATC...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATTGGTTCTGGATCTTTTaGGGGTATGACTACACCTTG +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYWFWIF*GYDYTL
Trigger: CAAGGTGTAGTCATACCCTCAAAAGATCCAGAACCA...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTAGCATGACTGACATGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITSMTDM*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACATGTCAGTCATGCT...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACTCCCACGTTGTAGTTaGCTTGGTCTGTGTGACCAA +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVLPRCS*LGLCDQ
Trigger: TTGGTCACACAGACCAAGTCAACTACAACGTGGGAG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCGCACAAGATTGTCCATaGTCACCCATCAGGTATTTT +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILAQDCP*SPIRYF
Trigger: AAAATACCTGATGGGTGAGCATGGACAATCTTGTGC...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACCTCCAGCGGCCCAATaGTCGATTCACAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVPPAAQ*SIHKHF
Trigger: AAAATGCTTGTGAATCGAGCATTGGGCCGCTGGAGG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACCACTCTCAGATTTCTaGGGCTCAGAAACTGGAGAT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVPLSDF*GSETGD
Trigger: ATCTCCAGTTTCTGAGCCTCAGAAATCTGAGAGTGG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp TTTATTAGTGCTGTACACATGGCTGGCATTCAGATTAGTATTGATGTAAAGATGGCTCGGAGCATACGCTaGCTCCAGCGGCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: FISAVHMAGIQISIDVKMARSIR*LQRPNA
Trigger: AGCATTGGGCCGCTGGAGGCAGCGTATGCTCCGAGC...CATCTTTACATCAATACTAATCTGAATGCCAGCCATGTGTACAGCACTAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAACCCGTCATAGTCTTTaGCCATTCCGCCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVTRHSL*PFRQFL
Trigger: AAGAAACTGGCGGAATGGCCAAAGACTATGACGGGT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATTCCTTGGGAAGTTCTaGCTTATGGTCCTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVFLGKF*LMVLCH
Trigger: GTGACACAGGACCATAAGCCAGAACTTCCCAAGGAA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATTTCGTTCTCTTTCCTTaGGAAGTTCTGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYFVLFP*EVLAYG
Trigger: ACCATAAGCCAGAACTTCCCAAGGAAAGAGAACGAA...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCTTAGTGCTGTACACATaGCTGGCATTCAGATTAGTA +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILLVLYT*LAFRLV
Trigger: TACTAATCTGAATGCCAGCCATGTGTACAGCACTAA...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATGGTTCTGGATCTTTTaGGGGTATGACTACACCTTG +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVWFWIF*GYDYTL
Trigger: CAAGGTGTAGTCATACCCTCAAAAGATCCAGAACCA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACATGACAGTGTTTGTTaGATTAGTAGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVHDSVC*ISRHKA
Trigger: GGCCTTGTGCCTACTAATTCAACAAACACTGTCATG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCTCATTAGAGCATTTTaGATTTCAGATTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITLIRAF*ISDWEH
Trigger: GTGTTCCCAATCTGAAATTCAAAATGCTCTAATGAG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGATGAAACCCCACAAGTaGTCCCGGGCAAACTGTGCC +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKMKPHK*SRANCA
Trigger: GGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCAT...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAAAGTGCTCTTGCTACTaGCAGAAAAGGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVKCSCY*QKRNLV
Trigger: GACCAGATTCCTTTTCTGGCAGTAGCAAGAGCACTT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTAGACTAACTGTAGCATaGCTCAACACTTCTATGAAA +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITRLTVA*LNTSMK
Trigger: TTTCATAGAAGTGTTGAGCCATGCTACAGTTAGTCT...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCAGACTAACTGTAGCATaGCTCAACACTTCTATGAAA +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILRLTVA*LNTSMK
Trigger: TTTCATAGAAGTGTTGAGCCATGCTACAGTTAGTCT...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATCACTTCCTTCTATGCTaGAGATTTAGTAAGCATATC +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYHFLLC*RFSKHI
Trigger: GATATGCTTACTAAATCTTCAGCATAGAAGGAAGTG...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp TGGGGAGACTTGCAGGCTGAGCACCACTACTTCGACTTAAGCCATTTCGTCTATAGCACCATCTGTTATTaGAATAGCAAGGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: WGDLQAEHHYFDLSHFVYSTICY*NSKENF
Trigger: GAAGTTTTCCTTGCTATTTCAATAACAGATGGTGCT...ATAGACGAAATGGCTTAAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGGGCACTAGTGTTATCTaGTCGGAGCATACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKGTSVI*SEHTLP
Trigger: AGGCAGCGTATGCTCCGAGCAGATAACACTAGTGCC...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATTCGTTCTCTTTCCTTaGGAAGTTCTGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVFVLFP*EVLAYG
Trigger: ACCATAAGCCAGAACTTCCCAAGGAAAGAGAACGAA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCCTTTTAAAGTTTGTTaGAGGGGTTCTTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITPFKVC*RGSFNF
Trigger: GAAATTGAAAGAACCCCTCCAACAAACTTTAAAAGG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCCCTTTTAAAGTTTGTTaGAGGGGTTCTTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILPFKVC*RGSFNF
Trigger: GAAATTGAAAGAACCCCTCCAACAAACTTTAAAAGG...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCAGAATGTGTGGACATaGTTAAATAATGGCATAGTT +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITQNVWT*LNNGIV
Trigger: AACTATGCCATTATTTAACCATGTCCACACATTCTG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CCA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTAACAAAATACAGAATTaGTATGACACTTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HHGFFLALRCCLLWGQITNKIQN*YDTFRG
Trigger: GCCTCTGAAAGTGTCATACCAATTCTGTATTTTGTT...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTTCCACATGGCAAGGTaGCAAGCGAGAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKFHMAR*QARKPL
Trigger: CAAAGGCTTTCTCGCTTGTCACCTTGCCATGTGGAA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTCCAAGAACCACCCCTaGGTCACCTACGTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSKNHP*VTYVSY
Trigger: GTAGCTCACGTAGGTGACTCAGGGGTGGTTCTTGGA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR TCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGCAGGTCCATTGTGAGTaGGTCGAGGTCGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKQVHCE*VEVVSK
Trigger: TTTGGAAACGACCTCGACTCACTCACAATGGACCTG...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTGGGAGACTTGCAGGCTaGGCACCACTACTTCGACTT +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFGRLAG*APLLRL
Trigger: AAGTCGAAGTAGTGGTGCTCAGCCTGCAAGTCTCCC...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTATGAAACCCCACAAGTaGTCCCGGGCAAACTGTGCC +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFMKPHK*SRANCA
Trigger: GGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCAT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR GCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGCCTCCAGCGGCCCAATaGTCGATTCACAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKPPAAQ*SIHKHF
Trigger: AAAATGCTTGTGAATCGAGCATTGGGCCGCTGGAGG...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACTGATTGTCCACTTCTaGAGAGATGCAGATTACTAT +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVLIVHF*RDADYY
Trigger: ATAGTAATCTGCATCTCTCCAGAAGTGGACAATCAG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
3UTR CAA 72 bp ATGCCTTGTGTAGGAGTCTCCCACGTTGTAGTTGACTaGGTCTGTGTGACCAACAAAATACAGAATTGGTAT +
Preference number: 4 (lower is better)
Translates to: MPCVGVSHVVVD*VCVTNKIQNWY
Trigger: ATACCAATTCTGTATTTTGTTGGTCACACAGACCAAGTCAACTACAACGTGGGAGACTCCTACACAAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp TTTATTAGTGCTGTACACATGGCTGGCATTCAGATTAGTATTGATGTAAAGATGTCCTTCGGGTCATCCTaGATTCCAAGAACCACCCCT +
Preference number: 4 (lower is better)
Translates to: FISAVHMAGIQISIDVKMSFGSS*IPRTTP
Trigger: AGGGGTGGTTCTTGGAATTCAGGATGACCCGAAGGA...CATCTTTACATCAATACTAATCTGAATGCCAGCCATGTGTACAGCACTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp TTTATTAGTGCTGTACACATGGCTGGCATTCAGATTAGTATTGATGTAAAGATGTCACCTCCACAGCTCTaGCAAAGTCATCCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: FISAVHMAGIQISIDVKMSPPQL*QSHPSG
Trigger: ACCCGAAGGATGACTTTGTCAGAGCTGTGGAGGTGA...CATCTTTACATCAATACTAATCTGAATGCCAGCCATGTGTACAGCACTAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTGTGTCTGGTTCAGGTaGCACCACAAATTCACCACT +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKCVWFR*HHKFTT
Trigger: AGTGGTGAATTTGTGGTGTCACCTGAACCAGACACA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTTGGTCCTGGCACATTaGGATGGCATCTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFLVLAH*DGILWW
Trigger: CCACCACAAGATGCCATCTCAATGTGCCAGGACCAA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTAGAGTTCTTTCGCTGTaGGGTTGTGGGGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFRVLSL*GCGETC
Trigger: GCAAGTCTCCCCACAACCTCACAGCGAAAGAACTCT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR TCA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACACTTCCTTCTATGCTaGAGATTTAGTAAGCATATC +
Preference number: 4 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVHFLLC*RFSKHI
Trigger: GATATGCTTACTAAATCTTCAGCATAGAAGGAAGTG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCATGTGGCAACAAACTaGGGTCTCCTGCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFHVATN*GLLPTA
Trigger: AGCTGTTGGCAGGAGACCTCAGTTTGTTGCCACATG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTAAGCGAGAAAGCCTTTaGGGATGGCAGCGCAAACCT +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFKRESL*GWQRKP
Trigger: AGGTTTGCGCTGCCATCCGCAAAGGCTTTCTCGCTT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR GCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGAAGCCATTTCGTCTATaGTTCTTCATCAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKKPFRL*FFIRGP
Trigger: TGGCCCCCTGATGAAGAAGCATAGACGAAATGGCTT...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTCATGGCTTCTTCCTTaGCCTCCGGTGTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSWLLP*PPVLLA
Trigger: AGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTGGCTCCACAACGATTTaGGTAACGTCCTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFGSTTI*VTSSMY
Trigger: GTACATGGAGGACGTTACTCAAATCGTTGTGGAGCC...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCAGGTCCATTGTGAGTaGGTCGAGGTCGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFQVHCE*VEVVSK
Trigger: TTTGGAAACGACCTCGACTCACTCACAATGGACCTG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR TCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGCATGACAGTGTTTGTTaGATTAGTAGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKHDSVC*ISRHKA
Trigger: GGCCTTGTGCCTACTAATTCAACAAACACTGTCATG...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGAAGTGCTCTTGCTACTaGCAGAAAAGGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKKCSCY*QKRNLV
Trigger: GACCAGATTCCTTTTCTGGCAGTAGCAAGAGCACTT...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTCTCTGAGAAGGCATTaGTACGAACCAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSLRRH*YEPGQV
Trigger: TACCTGCCCTGGTTCGTAGCAATGCCTTCTCAGAGA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTGGAAGTTCTGGCTTATaGTCCTGTGTCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFGSSGL*SCVTST
Trigger: TGTGGAGGTGACACAGGACCATAAGCCAGAACTTCC...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGGGTATGACTACACCTTaGACATTCTCTCGAGCTATC +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKGMTTP*TFSRAI
Trigger: GATAGCTCGAGAGAATGTCCAAGGTGTAGTCATACC...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGAAAATCCTTGACTGGTaGTGTAGAACATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKKILDW*CRTWGR
Trigger: CCTTCCCCATGTTCTACACCACCAGTCAAGGATTTT...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR TCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTGTGTCTGGTTCAGGTaGCACCACAAATTCACCACT +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFCVWFR*HHKFTT
Trigger: AGTGGTGAATTTGTGGTGTCACCTGAACCAGACACA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR TCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGTGGATCCTCCTCCAGTaGCTTTTTATTAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKWILLQ*LFISAV
Trigger: TACAGCACTAATAAAAAGTCACTGGAGGAGGATCCA...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGATCACCAAGTGCTCTTaGTACTGCCAGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKITKCS*YCQKRN
Trigger: ATTCCTTTTCTGGCAGTAGCAAGAGCACTTGGTGAT...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTAAGCCATTTCGTCTATaGTTCTTCATCAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFKPFRL*FFIRGP
Trigger: TGGCCCCCTGATGAAGAAGCATAGACGAAATGGCTT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CCA 90 bp TTTATTAGTGCTGTACACATGGCTGGCATTCAGATTAGTATTGATGTAAAGATGACCCGTCATAGTCTTTaGCCATTCCGCCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FISAVHMAGIQISIDVKMTRHSL*PFRQFL
Trigger: AAGAAACTGGCGGAATGGCCAAAGACTATGACGGGT...CATCTTTACATCAATACTAATCTGAATGCCAGCCATGTGTACAGCACTAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTGGTGGTGTAGAACATaGGGAAGGAGTCATCACACA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFWWCRT*GRSHHT
Trigger: TGTGTGATGACTCCTTCCCCATGTTCTACACCACCA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCCACAAATCACCAAGTaGTCTTGCTACTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFPQITK*SCYCQK
Trigger: TTTCTGGCAGTAGCAAGAGCACTTGGTGATTTGTGG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CCA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGCTGATTGTCCACTTCTaGAGAGATGCAGATTACTAT +
Preference number: 4 (lower is better)
Translates to: SFPRCISANTNSFPVLMKLIVHF*RDADYY
Trigger: ATAGTAATCTGCATCTCTCCAGAAGTGGACAATCAG...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp TTTATTAGTGCTGTACACATGGCTGGCATTCAGATTAGTATTGATGTAAAGATGTCTTGGGCTTTCATTTaGCCAGGAGTTGACATCTTC +
Preference number: 4 (lower is better)
Translates to: FISAVHMAGIQISIDVKMSWAFI*PGVDIF
Trigger: GAAGATGTCAACTCCTGGCCAAATGAAAGCCCAAGA...CATCTTTACATCAATACTAATCTGAATGCCAGCCATGTGTACAGCACTAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTCAGGGGGCCAGAATTaGACTCTTCTAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSGGQN*TLLMSF
Trigger: AAAGGACATTAGAAGAGTCCAATTCTGGCCCCCTGA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTCCAAAATCCTTGACTaGTGGTGTAGAACATGGGGA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSKILD*WCRTWG
Trigger: TCCCCATGTTCTACACCACCAGTCAAGGATTTTGGA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTATCACCAAGTGCTCTTaGTACTGCCAGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFITKCS*YCQKRN
Trigger: ATTCCTTTTCTGGCAGTAGCAAGAGCACTTGGTGAT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR GCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTGCACAAGATTGTCCATaGTCACCCATCAGGTATTTT +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFAQDCP*SPIRYF
Trigger: AAAATACCTGATGGGTGAGCATGGACAATCTTGTGC...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
3UTR CAA 72 bp GGCACCAAATTTAAAAAGCCCTCTTATATCCTAAGTTaGGAAAAACCTCATTTCCCAGATGCATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GTKFKKPSYILS*EKPHFPDAFQQ
Trigger: TTGCTGAAATGCATCTGGGAAATGAGGTTTTTCCAAACTTAGGATATAAGAGGGCTTTTTAAATTTGGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CCA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTAGGCACAAGGCCAATTaGAAGGCTATTATTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SKENFTYFKQTREGSNYFRHKAN*KAIIQR
Trigger: TCTTTGAATAATAGCCTTCCAATTGGCCTTGTGCCT...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS TCA 90 bp TCGCCGCCGGGAAGGGCGGCCGGCGACGGCCGCGGAGGCAACGGCTaGGACAGCGACCGCCGCGGCGAGGGCTTTTCTTCAGCCGTCGGT +
Preference number: 5 (lower is better)
Translates to: SPPGRAAGDGRGGNG*DSDRRGEGFSSAVG
Trigger: ACCGACGGCTGAAGAAAAGCCCTCGCCGCGGCGGTCGCTGTCTCAGCCGTTGCCTCCGCGGCCGTCGCCGGCCGCCCTTCCCGGCGGCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CCA 90 bp GAGAAGACGCTCACTCCCAGCGAGTACAGCCCCGCCATGGCCGGCTaGCCGGGATCCCGCCGGTCCCACGCAGCCCGCCGAATCCGGCGG +
Preference number: 5 (lower is better)
Translates to: EKTLTPSEYSPAMAG*PGSRRSHAARRIRR
Trigger: CCGCCGGATTCGGCGGGCTGCGTGGGACCGGCGGGATCCCGGCCAGCCGGCCATGGCGGGGCTGTACTCGCTGGGAGTGAGCGTCTTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CCA 90 bp CCTGGTCGGAGAAGACGCTCACTCCCAGCGAGTACAGCCCCGCCATaGCCGGCTGGCCGGGATCCCGCCGGTCCCACGCAGCCCGCCGAA +
Preference number: 5 (lower is better)
Translates to: PGRRRRSLPASTAPP*PAGRDPAGPTQPAE
Trigger: TTCGGCGGGCTGCGTGGGACCGGCGGGATCCCGGCCAGCCGGCCATGGCGGGGCTGTACTCGCTGGGAGTGAGCGTCTTCTCCGACCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 90 bp CTTCTGCTTCTTGATGAAACCCCACAAGTGCTCCCGGGCAAACTGTaGCGCCTCCCGCCCGCCGTGCCCGTCGCACACGGCGAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: LLLLDETPQVLPGKL*RLPPAVPVAHGEKG
Trigger: GCCTTTTTCGCCGTGTGCGACGGGCACGGCGGGCGGGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 90 bp TCGGACGAGGTGAAACCCTTCTGCTTCTTGATGAAACCCCACAAGTaGTCCCGGGCAAACTGTGCCGCCTCCCGCCCGCCGTGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: SDEVKPFCFLMKPHK*SRANCAASRPPCPS
Trigger: CGACGGGCACGGCGGGCGGGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAGGGTTTCACCTCGTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS TCA 90 bp GGCGAGGGCTTTTCTTCAGCCGTCGGTTCGGGCTCCACAACGATTTaGGTAACGTCCTCCATGTACTTCCTCCCGCCCTGGTCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GEGFSSAVGSGSTTI*VTSSMYFLPPWSEK
Trigger: CTTCTCCGACCAGGGCGGGAGGAAGTACATGGAGGACGTTACTCAAATCGTTGTGGAGCCCGAACCGACGGCTGAAGAAAAGCCCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 90 bp ATGGCAGCGCAAACCTTAGCCGGCTCGGACGAGGTGAAACCCTTCTaGTTCTTGATGAAACCCCACAAGTGCTCCCGGGCAAACTGTGCC +
Preference number: 5 (lower is better)
Translates to: MAAQTLAGSDEVKPF*FLMKPHKCSRANCA
Trigger: GGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAGGGTTTCACCTCGTCCGAGCCGGCTAAGGTTTGCGCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAGCGCGATGTCTGGACTaGTCCGCGAGAGCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVARCLD*SARAGP
Trigger: CGGCCCAGCTCTCGCGGACAAGTCCAGACATCGCGC...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCAGGTTGTGGGGAGACTaGCAGGCTGAGCACCACTAC +
Preference number: 5 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILRLWGD*QAEHHY
Trigger: GTAGTGGTGCTCAGCCTGCAAGTCTCCCCACAACCT...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS TCA 90 bp GTCATAGTCTTTGGCCATTCCGCCAGTTTCTTCCACATGGCAAGGTaGCAAGCGAGAAAGCCTTTGCGGATGGCAGCGCAAACCTTAGCC +
Preference number: 5 (lower is better)
Translates to: VIVFGHSASFFHMAR*QARKPLRMAAQTLA
Trigger: GGCTAAGGTTTGCGCTGCCATCCGCAAAGGCTTTCTCGCTTGTCACCTTGCCATGTGGAAGAAACTGGCGGAATGGCCAAAGACTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 90 bp GTCCACTTCTGGAGAGATGCAGATTACTATGGCACTAGTGTTATCTaGTCGGAGCATACGCTGCCTCCAGCGGCCCAATGCTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: VHFWRDADYYGTSVI*SEHTLPPAAQCSIH
Trigger: GTGAATCGAGCATTGGGCCGCTGGAGGCAGCGTATGCTCCGAGCAGATAACACTAGTGCCATAGTAATCTGCATCTCTCCAGAAGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS-3UTR CAA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCCTCGCCGGCCAACTATaGTTTATCTTCGACGACGCC +
Preference number: 5 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILLAGQL*FIFDDA
Trigger: GGCGTCGTCGAAGATAAACAATAGTTGGCCGGCGAG...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS TCA 90 bp CCTTGGGAAGTTCTGGCTTATGGTCCTGTGTCACCTCCACAGCTCTaGCAAAGTCATCCTTCGGGTCATCCTGAATTCCAAGAACCACCC +
Preference number: 5 (lower is better)
Translates to: PWEVLAYGPVSPPQL*QSHPSGHPEFQEPP
Trigger: GGGTGGTTCTTGGAATTCAGGATGACCCGAAGGATGACTTTGTCAGAGCTGTGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS GCA 90 bp ACTAGTGTTATCTGCTCGGAGCATACGCTGCCTCCAGCGGCCCAATaGTCGATTCACAAGCATTTTGGCACAAGATTGTCCATGCTCACC +
Preference number: 5 (lower is better)
Translates to: TSVICSEHTLPPAAQ*SIHKHFGTRLSMLT
Trigger: GGTGAGCATGGACAATCTTGTGCCAAAATGCTTGTGAATCGAGCATTGGGCCGCTGGAGGCAGCGTATGCTCCGAGCAGATAACACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS-3UTR CAA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCTTGGTCCTGGCACATaGAGATGGCATCTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: HHGFFLALRCCLLWGQITLGPGT*RWHLVV
Trigger: CACCACAAGATGCCATCTCAATGTGCCAGGACCAAG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS CCA 90 bp CCAAGTCCTTCGATTCGTTCTCTTTCCTTGGGAAGTTCTGGCTTATaGTCCTGTGTCACCTCCACAGCTCTGACAAAGTCATCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: PSPSIRSLSLGSSGL*SCVTSTALTKSSFG
Trigger: CCCGAAGGATGACTTTGTCAGAGCTGTGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAGGAAAGAGAACGAATCGAAGGACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS-3UTR CAA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTGGGCTCCACAACGATTaGAGTAACGTCCTCCATGTA +
Preference number: 5 (lower is better)
Translates to: HHGFFLALRCCLLWGQITGLHND*SNVLHV
Trigger: TACATGGAGGACGTTACTCAAATCGTTGTGGAGCCC...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCCAAGAGTGTGGACACTaGTGTCTGGTTCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILQECGH*CLVQVT
Trigger: TGTCACCTGAACCAGACACAAGTGTCCACACTCTTG...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAAGGTTGTGGGGAGACTaGCAGGCTGAGCACCACTAC +
Preference number: 5 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVRLWGD*QAEHHY
Trigger: GTAGTGGTGCTCAGCCTGCAAGTCTCCCCACAACCT...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCCTAGAATTCATGCCTaGTGTAGGAGTCTCCCACGT +
Preference number: 5 (lower is better)
Translates to: HHGFFLALRCCLLWGQITPRIHA*CRSLPR
Trigger: ACGTGGGAGACTCCTACACAAGGCATGAATTCTAGG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS GCA 90 bp ATGCAGATTACTATGGCACTAGTGTTATCTGCTCGGAGCATACGCTaGCTCCAGCGGCCCAATGCTCGATTCACAAGCATTTTGGCACAA +
Preference number: 5 (lower is better)
Translates to: MQITMALVLSARSIR*LQRPNARFTSILAQ
Trigger: TTGTGCCAAAATGCTTGTGAATCGAGCATTGGGCCGCTGGAGGCAGCGTATGCTCCGAGCAGATAACACTAGTGCCATAGTAATCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CCA 90 bp ACTCCCACCAAGTCCTTCGATTCGTTCTCTTTCCTTGGGAAGTTCTaGCTTATGGTCCTGTGTCACCTCCACAGCTCTGACAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: TPTKSFDSFSFLGKF*LMVLCHLHSSDKVI
Trigger: GATGACTTTGTCAGAGCTGTGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAGGAAAGAGAACGAATCGAAGGACTTGGTGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS TCA 90 bp GACAAAGTCATCCTTCGGGTCATCCTGAATTCCAAGAACCACCCCTaGGTCACCTACGTGAGCTACATACATCTTCATGCCCCGAATGAT +
Preference number: 5 (lower is better)
Translates to: DKVILRVILNSKNHP*VTYVSYIHLHAPND
Trigger: ATCATTCGGGGCATGAAGATGTATGTAGCTCACGTAGGTGACTCAGGGGTGGTTCTTGGAATTCAGGATGACCCGAAGGATGACTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS-3UTR CAA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTAATCACCAAGTGCTCTaGCTACTGCCAGAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: HHGFFLALRCCLLWGQITNHQVL*LLPEKE
Trigger: TTCCTTTTCTGGCAGTAGCAAGAGCACTTGGTGATT...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATTCTCTGAGAAGGCATaGCTACGAACCAGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVFSEKA*LRTRAG
Trigger: ACCTGCCCTGGTTCGTAGCAATGCCTTCTCAGAGAA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp ACGAACCAGGGCAGGTATATGGTCCTTAGAATTCACCCTTGGCCATGGATCCTCGGTTCTTTCAATTTCTaGGGCTTTCATTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TNQGRYMVLRIHPWPWILGSFNF*GFHLAR
Trigger: CCTGGCCAAATGAAAGCCCAAGAAATTGAAAGAACC...GAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCTGCCCTGGTTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTACAAGAGTGTGGACACTaGTGTCTGGTTCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVQECGH*CLVQVT
Trigger: TGTCACCTGAACCAGACACAAGTGTCCACACTCTTG...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp CATCATGGCTTCTTCCTTGCCCTCCGGTGTTGCTTGCTCTGGGGACAAATAACTCATCACACAGGTTTCTaGACTATTATAGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: HHGFFLALRCCLLWGQITHHTGF*TIIGRA
Trigger: AGCCCTTCCTATAATAGTCAAGAAACCTGTGTGATG...AGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTATCCTCCTCCAGTGACTaGACTGGTGGTGTAGAACAT +
Preference number: 5 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVSSSSD*TGGVEH
Trigger: ATGTTCTACACCACCAGTCAAGTCACTGGAGGAGGA...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS TCA 90 bp AAAGGAATCTGGTCAATAACTGTGCTCCTTCTAACAGGTCCATTGTaGGTGAGTCGAGGTCGTTTCCAAACTACACGATTCACCCCAGAC +
Preference number: 5 (lower is better)
Translates to: KGIWSITVLLLTGPL*VSRGRFQTTRFTPD
Trigger: GTCTGGGGTGAATCGTGTAGTTTGGAAACGACCTCGACTCACTCACAATGGACCTGTTAGAAGGAGCACAGTTATTGACCAGATTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS TCA 90 bp GTGCTTCTGAGGGTCAAGAGTGTGGACACTTGTGTCTGGTTCAGGTaGCACCACAAATTCACCACTGAAGAAATCATAGCTCCACAAATC +
Preference number: 5 (lower is better)
Translates to: VLLRVKSVDTCVWFR*HHKFTTEEIIAPQI
Trigger: GATTTGTGGAGCTATGATTTCTTCAGTGGTGAATTTGTGGTGTCACCTGAACCAGACACAAGTGTCCACACTCTTGACCCTCAGAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS-3UTR CAA 90 bp AAAAATGCCCACCTCCTAGAATTCATGCCTTGTGTAGGAGTCTCCCACGTTGTAGGTTCTTTCAATTTCTaGGGCTTTCATTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KNAHLLEFMPCVGVSHVVGSFNF*GFHLAR
Trigger: CCTGGCCAAATGAAAGCCCAAGAAATTGAAAGAACC...TACAACGTGGGAGACTCCTACACAAGGCATGAATTCTAGGAGGTGGGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCCCAGAAGGCAGAGGTaGCAGGGAGCCGAGATCACA +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFPRRQR*QGAEIT
Trigger: TGTGATCTCGGCTCCCTGCAACCTCTGCCTTCTGGG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS TCA 90 bp ATATTCCAAAGTCCATCACTCCCCAATATAATATACTTGTGCTTCTaGGGGTCAAGAGTGTGGACACTTGTGTCTGGTTCAGGTGACACC +
Preference number: 5 (lower is better)
Translates to: IFQSPSLPNIIYLCF*GSRVWTLVSGSGDT
Trigger: GGTGTCACCTGAACCAGACACAAGTGTCCACACTCTTGACCCTCAGAAGCACAAGTATATTATATTGGGGAGTGATGGACTTTGGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCAAGCGAGAAAGCCTTaGCGGATGGCAGCGCAAACC +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFQARKP*RMAAQT
Trigger: GGTTTGCGCTGCCATCCGCAAAGGCTTTCTCGCTTG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CAA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGCTTGGTCCTGGCACATaGAGATGGCATCTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SFPRCISANTNSFPVLMKLGPGT*RWHLVV
Trigger: CACCACAAGATGCCATCTCAATGTGCCAGGACCAAG...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTGTAATCCCAGTACTTaGGGAGGTCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFCNPST*GGRGGW
Trigger: CCACCCGCCTCGACCTCCCAAAGTACTGGGATTACA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCTCGCCGGCCAACTATaGTTTATCTTCGACGACGCC +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFLAGQL*FIFDDA
Trigger: GGCGTCGTCGAAGATAAACAATAGTTGGCCGGCGAG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTCTTTCGCTGTGAGGTaGTGGGGAGACTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSFAVR*WGDLQA
Trigger: AGCCTGCAAGTCTCCCCACAACCTCACAGCGAAAGA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS TCA 90 bp TCAGTCAGGTTCAGGTATAACTCATCTTCATTGGTAAAGTTTCCCTaGTTGTCCACTTCTGGAGAGATGCAGATTACTATGGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: SVRFRYNSSSLVKFP*LSTSGEMQITMALV
Trigger: CACTAGTGCCATAGTAATCTGCATCTCTCCAGAAGTGGACAATCAGGGAAACTTTACCAATGAAGATGAGTTATACCTGAACCTGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTGGGCTCCACAACGATTaGAGTAACGTCCTCCATGTA +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFGLHND*SNVLHV
Trigger: TACATGGAGGACGTTACTCAAATCGTTGTGGAGCCC...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTCGATTCACCCCAGACTaGTTCATTACACTCCCACCA +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFRFTPD*FITLPP
Trigger: TGGTGGGAGTGTAATGAACAAGTCTGGGGTGAATCG...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305921.8
ENST00000392995.7
CDS-3UTR CAA 90 bp TTTATTAGTGCTGTACACATGGCTGGCATTCAGATTAGTATTGATGTAAAGATGCGATTCACCCCAGACTaGTTCATTACACTCCCACCA +
Preference number: 5 (lower is better)
Translates to: FISAVHMAGIQISIDVKMRFTPD*FITLPP
Trigger: TGGTGGGAGTGTAATGAACAAGTCTGGGGTGAATCG...CATCTTTACATCAATACTAATCTGAATGCCAGCCATGTGTACAGCACTAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CAA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGAATCACCAAGTGCTCTaGCTACTGCCAGAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: SFPRCISANTNSFPVLMKNHQVL*LLPEKE
Trigger: TTCCTTTTCTGGCAGTAGCAAGAGCACTTGGTGATT...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTTCTGGGGAGAGAGATaGAGGCAGGAGAATCACTTG +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFFWGER*RQENHL
Trigger: CAAGTGATTCTCCTGCCTCAATCTCTCTCCCCAGAA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000305921.8
CDS-3UTR CAA 90 bp TCATTTCCCAGATGCATTTCAGCAAACACAAACAGTTTTCCTGTGTTGATGAAGCATCACACAGGTTTCTaGACTATTATAGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: SFPRCISANTNSFPVLMKHHTGF*TIIGRA
Trigger: AGCCCTTCCTATAATAGTCAAGAAACCTGTGTGATG...CTTCATCAACACAGGAAAACTGTTTGTGTTTGCTGAAATGCATCTGGGAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS-3UTR CAA 90 bp AGCAAGGAAAACTTCACATATTTTAAGCAAACACGAGAAGGGAGTAACTACTTTTCAAATCCAAAATCCTaGACTGGTGGTGTAGAACAT +
Preference number: 5 (lower is better)
Translates to: SKENFTYFKQTREGSNYFSNPKS*TGGVEH
Trigger: ATGTTCTACACCACCAGTCAAGGATTTTGGATTTGA...AAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTTTCCTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000392995.7
CDS CCA 72 bp CTCACTCCCAGCGAGTACAGCCCCGCCATGGCCGGCTaGCCGGGATCCCGCCGGTCCCACGCAGCCCGCCGA +
Preference number: 6 (lower is better)
Translates to: LTPSEYSPAMAG*PGSRRSHAARR
Trigger: TCGGCGGGCTGCGTGGGACCGGCGGGATCCCGGCCAGCCGGCCATGGCGGGGCTGTACTCGCTGGGAGTGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CCA 72 bp CGGGAGAGGGTCGCGAGCCTCTCGGGCTGCCACCGCTaGGCCTTTCCCCGAGACTTCGCCGCCGGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RERVASLSGCHR*AFPRDFAAGKG
Trigger: GCCCTTCCCGGCGGCGAAGTCTCGGGGAAAGGCCCAGCGGTGGCAGCCCGAGAGGCTCGCGACCCTCTCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CCA 72 bp AGAAGACGCTCACTCCCAGCGAGTACAGCCCCGCCATaGCCGGCTGGCCGGGATCCCGCCGGTCCCACGCAG +
Preference number: 6 (lower is better)
Translates to: RRRSLPASTAPP*PAGRDPAGPTQ
Trigger: CTGCGTGGGACCGGCGGGATCCCGGCCAGCCGGCCATGGCGGGGCTGTACTCGCTGGGAGTGAGCGTCTTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 72 bp CTTGATGAAACCCCACAAGTGCTCCCGGGCAAACTGTaGCGCCTCCCGCCCGCCGTGCCCGTCGCACACGGC +
Preference number: 6 (lower is better)
Translates to: LDETPQVLPGKL*RLPPAVPVAHG
Trigger: GCCGTGTGCGACGGGCACGGCGGGCGGGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 72 bp GTGAAACCCTTCTGCTTCTTGATGAAACCCCACAAGTaGTCCCGGGCAAACTGTGCCGCCTCCCGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: VKPFCFLMKPHK*SRANCAASRPP
Trigger: CGGCGGGCGGGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAGGGTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CAA 90 bp GCGCAAACCTTAGCCGGCTCGGACGAGGTGAAACCCTTCTGCTTCTaGATGAAACCCCACAAGTGCTCCCGGGCAAACTGTGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: AQTLAGSDEVKPFCF*MKPHKCSRANCAAS
Trigger: GGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAGGGTTTCACCTCGTCCGAGCCGGCTAAGGTTTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CAA 90 bp CGGCGAGGGCTTTTCTTCAGCCGTCGGTTCGGGCTCCACAACGATTaGAGTAACGTCCTCCATGTACTTCCTCCCGCCCTGGTCGGAGAA +
Preference number: 6 (lower is better)
Translates to: RRGLFFSRRFGLHND*SNVLHVLPPALVGE
Trigger: TTCTCCGACCAGGGCGGGAGGAAGTACATGGAGGACGTTACTCAAATCGTTGTGGAGCCCGAACCGACGGCTGAAGAAAAGCCCTCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 72 bp CAAACCTTAGCCGGCTCGGACGAGGTGAAACCCTTCTaGTTCTTGATGAAACCCCACAAGTGCTCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: QTLAGSDEVKPF*FLMKPHKCSRA
Trigger: TGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAGGGTTTCACCTCGTCCGAGCCGGCTAAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS TCA 72 bp TTTTCTTCAGCCGTCGGTTCGGGCTCCACAACGATTTaGGTAACGTCCTCCATGTACTTCCTCCCGCCCTGG +
Preference number: 6 (lower is better)
Translates to: FSSAVGSGSTTI*VTSSMYFLPPW
Trigger: CCAGGGCGGGAGGAAGTACATGGAGGACGTTACTCAAATCGTTGTGGAGCCCGAACCGACGGCTGAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CAA 72 bp CTTTTCTTCAGCCGTCGGTTCGGGCTCCACAACGATTaGAGTAACGTCCTCCATGTACTTCCTCCCGCCCTG +
Preference number: 6 (lower is better)
Translates to: LFFSRRFGLHND*SNVLHVLPPAL
Trigger: CAGGGCGGGAGGAAGTACATGGAGGACGTTACTCAAATCGTTGTGGAGCCCGAACCGACGGCTGAAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CAA 72 bp TTAGCCGGCTCGGACGAGGTGAAACCCTTCTGCTTCTaGATGAAACCCCACAAGTGCTCCCGGGCAAACTGT +
Preference number: 6 (lower is better)
Translates to: LAGSDEVKPFCF*MKPHKCSRANC
Trigger: ACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAGGGTTTCACCTCGTCCGAGCCGGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS TCA 72 bp TTTGGCCATTCCGCCAGTTTCTTCCACATGGCAAGGTaGCAAGCGAGAAAGCCTTTGCGGATGGCAGCGCAA +
Preference number: 6 (lower is better)
Translates to: FGHSASFFHMAR*QARKPLRMAAQ
Trigger: TTGCGCTGCCATCCGCAAAGGCTTTCTCGCTTGTCACCTTGCCATGTGGAAGAAACTGGCGGAATGGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 72 bp ATCTGCTCGGAGCATACGCTGCCTCCAGCGGCCCAATaGTCGATTCACAAGCATTTTGGCACAAGATTGTCC +
Preference number: 6 (lower is better)
Translates to: ICSEHTLPPAAQ*SIHKHFGTRLS
Trigger: GGACAATCTTGTGCCAAAATGCTTGTGAATCGAGCATTGGGCCGCTGGAGGCAGCGTATGCTCCGAGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 72 bp TGGAGAGATGCAGATTACTATGGCACTAGTGTTATCTaGTCGGAGCATACGCTGCCTCCAGCGGCCCAATGC +
Preference number: 6 (lower is better)
Translates to: WRDADYYGTSVI*SEHTLPPAAQC
Trigger: GCATTGGGCCGCTGGAGGCAGCGTATGCTCCGAGCAGATAACACTAGTGCCATAGTAATCTGCATCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS GCA 72 bp ACTATGGCACTAGTGTTATCTGCTCGGAGCATACGCTaGCTCCAGCGGCCCAATGCTCGATTCACAAGCATT +
Preference number: 6 (lower is better)
Translates to: TMALVLSARSIR*LQRPNARFTSI
Trigger: AATGCTTGTGAATCGAGCATTGGGCCGCTGGAGGCAGCGTATGCTCCGAGCAGATAACACTAGTGCCATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CCA 72 bp CACTCCCACCAAGTCCTTCGATTCGTTCTCTTTCCTTaGGAAGTTCTGGCTTATGGTCCTGTGTCACCTCCA +
Preference number: 6 (lower is better)
Translates to: HSHQVLRFVLFP*EVLAYGPVSPP
Trigger: TGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAGGAAAGAGAACGAATCGAAGGACTTGGTGGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS CCA 72 bp GCCTCCAGCGGCCCAATGCTCGATTCACAAGCATTTTaGCACAAGATTGTCCATGCTCACCCATCAGGTATT +
Preference number: 6 (lower is better)
Translates to: ASSGPMLDSQAF*HKIVHAHPSGI
Trigger: AATACCTGATGGGTGAGCATGGACAATCTTGTGCCAAAATGCTTGTGAATCGAGCATTGGGCCGCTGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS TCA 72 bp ATCCTTCGGGTCATCCTGAATTCCAAGAACCACCCCTaGGTCACCTACGTGAGCTACATACATCTTCATGCC +
Preference number: 6 (lower is better)
Translates to: ILRVILNSKNHP*VTYVSYIHLHA
Trigger: GGCATGAAGATGTATGTAGCTCACGTAGGTGACTCAGGGGTGGTTCTTGGAATTCAGGATGACCCGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS TCA 72 bp GTTCTGGCTTATGGTCCTGTGTCACCTCCACAGCTCTaGCAAAGTCATCCTTCGGGTCATCCTGAATTCCAA +
Preference number: 6 (lower is better)
Translates to: VLAYGPVSPPQL*QSHPSGHPEFQ
Trigger: TTGGAATTCAGGATGACCCGAAGGATGACTTTGTCAGAGCTGTGGAGGTGACACAGGACCATAAGCCAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS CAA 90 bp TTGTTCATTACACTCCCACCAAGTCCTTCGATTCGTTCTCTTTCCTaGGGAAGTTCTGGCTTATGGTCCTGTGTCACCTCCACAGCTCTG +
Preference number: 6 (lower is better)
Translates to: LFITLPPSPSIRSLS*GSSGLWSCVTSTAL
Trigger: CAGAGCTGTGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAGGAAAGAGAACGAATCGAAGGACTTGGTGGGAGTGTAATGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS CCA 72 bp TCGATTCGTTCTCTTTCCTTGGGAAGTTCTGGCTTATaGTCCTGTGTCACCTCCACAGCTCTGACAAAGTCA +
Preference number: 6 (lower is better)
Translates to: SIRSLSLGSSGL*SCVTSTALTKS
Trigger: TGACTTTGTCAGAGCTGTGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAGGAAAGAGAACGAATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS CAA 72 bp TATACTTGTGCTTCTGAGGGTCAAGAGTGTGGACACTaGTGTCTGGTTCAGGTGACACCACAAATTCACCAC +
Preference number: 6 (lower is better)
Translates to: YTCASEGQECGH*CLVQVTPQIHH
Trigger: GTGGTGAATTTGTGGTGTCACCTGAACCAGACACAAGTGTCCACACTCTTGACCCTCAGAAGCACAAGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS TCA 72 bp TGGTCAATAACTGTGCTCCTTCTAACAGGTCCATTGTaGGTGAGTCGAGGTCGTTTCCAAACTACACGATTC +
Preference number: 6 (lower is better)
Translates to: WSITVLLLTGPL*VSRGRFQTTRF
Trigger: GAATCGTGTAGTTTGGAAACGACCTCGACTCACTCACAATGGACCTGTTAGAAGGAGCACAGTTATTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000590418.1
ENST00000629650.2
CDS CCA 72 bp TCACCAAGTGCTCTTGCTACTGCCAGAAAAGGAATCTaGTCAATAACTGTGCTCCTTCTAACAGGTCCATTG +
Preference number: 6 (lower is better)
Translates to: SPSALATARKGI*SITVLLLTGPL
Trigger: CAATGGACCTGTTAGAAGGAGCACAGTTATTGACCAGATTCCTTTTCTGGCAGTAGCAAGAGCACTTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CAA 72 bp TGTAGAACATGGGGAAGGAGTCATCACACAGGTTTCTaGACTATTATAGGAAGGGCTGTCAGTCAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: CRTWGRSHHTGF*TIIGRAVSQVQ
Trigger: CTGAACCTGACTGACAGCCCTTCCTATAATAGTCAAGAAACCTGTGTGATGACTCCTTCCCCATGTTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS TCA 72 bp AGTCCATCACTCCCCAATATAATATACTTGTGCTTCTaGGGGTCAAGAGTGTGGACACTTGTGTCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: SPSLPNIIYLCF*GSRVWTLVSGS
Trigger: TGAACCAGACACAAGTGTCCACACTCTTGACCCTCAGAAGCACAAGTATATTATATTGGGGAGTGATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS CCA 72 bp TTCAAATCCAAAATCCTTGACTGGTGGTGTAGAACATaGGGAAGGAGTCATCACACAGGTTTCTTGACTATT +
Preference number: 6 (lower is better)
Translates to: FKSKILDWWCRT*GRSHHTGFLTI
Trigger: AATAGTCAAGAAACCTGTGTGATGACTCCTTCCCCATGTTCTACACCACCAGTCAAGGATTTTGGATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392995.7
ENST00000629650.2
CDS CCA 72 bp ATCTTCATTGGTAAAGTTTCCCTGATTGTCCACTTCTaGAGAGATGCAGATTACTATGGCACTAGTGTTATC +
Preference number: 6 (lower is better)
Translates to: IFIGKVSLIVHF*RDADYYGTSVI
Trigger: GATAACACTAGTGCCATAGTAATCTGCATCTCTCCAGAAGTGGACAATCAGGGAAACTTTACCAATGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2
CDS TCA 72 bp TTCAGGTATAACTCATCTTCATTGGTAAAGTTTCCCTaGTTGTCCACTTCTGGAGAGATGCAGATTACTATG +
Preference number: 6 (lower is better)
Translates to: FRYNSSSLVKFP*LSTSGEMQITM
Trigger: CATAGTAATCTGCATCTCTCCAGAAGTGGACAATCAGGGAAACTTTACCAATGAAGATGAGTTATACCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305921.8
ENST00000392995.7
ENST00000629650.2