RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPIL6 (Homo sapiens)

Ensembl gene IDs: ENSG00000185250

Ensembl transcript IDs: ENST00000417394.6, ENST00000424445.6, ENST00000440797.6, ENST00000447468.7, ENST00000518648.1, ENST00000520723.5, ENST00000521072.7, ENST00000524031.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCTCCACATTCCAGACTGGATGAAGGGGAAGGGGCAGGACCACTaGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGC +
Preference number: 1 (lower is better)
Translates to: PLHIPDWMKGKGQDH*RSIPVPLARTISHG
Trigger: GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTCTGGAATGTGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR TCA 90 bp CAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTGGATaGAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCAC +
Preference number: 1 (lower is better)
Translates to: QDDSCSSSLSTFQTG*RGRGRTTGVLFLSH
Trigger: GTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR CCA 90 bp CCCTGGGGAAAGAACCAAATGAACACAGAATCTCTGCCCCACGCCTaGGAACTCTGCCTCAGTAGGTCAAGGACAAGGTCTGTTAGGTTA +
Preference number: 1 (lower is better)
Translates to: PWGKNQMNTESLPHA*ELCLSRSRTRSVRL
Trigger: TAACCTAACAGACCTTGTCCTTGACCTACTGAGGCAGAGTTCCCAGGCGTGGGGCAGAGATTCTGTGTTCATTTGGTTCTTTCCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR TCA 90 bp ATGGGGACTGGAACCAGTTCCTTATGTCTTGCAGTGATTCCCAGATaGCTAGTGCCCAGCTGTCTAAATGGGAACCCTGGGGAAAGAGCT +
Preference number: 1 (lower is better)
Translates to: MGTGTSSLCLAVIPR*LVPSCLNGNPGERA
Trigger: AGCTCTTTCCCCAGGGTTCCCATTTAGACAGCTGGGCACTAGTCATCTGGGAATCACTGCAAGACATAAGGAACTGGTTCCAGTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR TCA 90 bp ACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTaGGTACCACCCTTTCACAGTCTCTATGACAGAGACAGGAAAGGA +
Preference number: 1 (lower is better)
Translates to: TISHGHPWLQRSLGN*VPPFHSLYDRDRKG
Trigger: TCCTTTCCTGTCTCTGTCATAGAGACTGTGAAAGGGTGGTACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR TCA 90 bp GGCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTaGGAATGTAACATAGGCGGTCTGCTTCCTCCCATCCACCTCAGG +
Preference number: 1 (lower is better)
Translates to: GPRTHILNTMLLWVS*ECNIGGLLPPIHLR
Trigger: CCTGAGGTGGATGGGAGGAAGCAGACCGCCTATGTTACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR TCA 90 bp ACTGTTTCTCAGATGAAGGAATTGAGGCACAGAAAAGTTCTTGCCTaGGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCT +
Preference number: 1 (lower is better)
Translates to: TVSQMKELRHRKVLA*VCAAREWQSQDSGP
Trigger: AGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAACTTTTCTGTGCCTCAATTCCTTCATCTGAGAAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR GCA 90 bp CTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTaGAGTGATTCCCAGATGACTAGTGCCCAGCTGTCTAAATGGGAA +
Preference number: 1 (lower is better)
Translates to: LTTLHHGDWNQFLMS*SDSQMTSAQLSKWE
Trigger: TTCCCATTTAGACAGCTGGGCACTAGTCATCTGGGAATCACTGCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR CCA 90 bp ATAGCAGAGTCAAGCACTCTGCTGACTACATTACACCATGGGGACTaGAACCAGTTCCTTATGTCTTGCAGTGATTCCCAGATGACTAGT +
Preference number: 1 (lower is better)
Translates to: IAESSTLLTTLHHGD*NQFLMSCSDSQMTS
Trigger: ACTAGTCATCTGGGAATCACTGCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGTGCTTGACTCTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR GCA 90 bp AAGAACCAAATGAACACAGAATCTCTGCCCCACGCCTGGGAACTCTaGCTCAGTAGGTCAAGGACAAGGTCTGTTAGGTTACATTTTAAA +
Preference number: 1 (lower is better)
Translates to: KNQMNTESLPHAWEL*LSRSRTRSVRLHFK
Trigger: TTTAAAATGTAACCTAACAGACCTTGTCCTTGACCTACTGAGGCAGAGTTCCCAGGCGTGGGGCAGAGATTCTGTGTTCATTTGGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR TCA 90 bp CAAAAGCCACAAATTTTCTATCTAGATAAGGAGTTGCTTGCAGTGTaGTATAGAATTGTGACCCGTTGCTGTGACGGCCTTTGTTGGCCA +
Preference number: 1 (lower is better)
Translates to: QKPQIFYLDKELLAV*YRIVTRCCDGLCWP
Trigger: TGGCCAACAAAGGCCGTCACAGCAACGGGTCACAATTCTATATCACACTGCAAGCAACTCCTTATCTAGATAGAAAATTTGTGGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447468.7
3UTR-3UTR TCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCACATTCCAGACTGGATaGAGGGGAAGGGGCAGGACC +
Preference number: 2 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGTFQTG*RGRGRT
Trigger: GGTCCTGCCCCTTCCCCTTCATCCAGTCTGGAATGT...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR TCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGTGTGACCCGTTGCTGTaGCGGCCTTTGTTGGCCATT +
Preference number: 2 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLCDPLL*RPLLAI
Trigger: AATGGCCAACAAAGGCCGTCACAGCAACGGGTCACA...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447468.7
3UTR-3UTR TCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCAATCTCTTGATCTTGTaGTCCACCTGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPNLLIL*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACAAGATCAAGAGATT...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCGACAGGAAAGGAAGATaGGGAGGGATTGGGTGTAGA +
Preference number: 2 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGDRKGR*GGIGCR
Trigger: TCTACACCCAATCCCTCCCCATCTTCCTTTCCTGTC...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR CCA 90 bp GGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGTCTCATGGCCACCCGTaGCTGCAAAGGAGTCTAGGA +
Preference number: 2 (lower is better)
Translates to: GRTTGVLFLSHWPEPSLMSHGHP*LQRSLG
Trigger: TCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGA...CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR CCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCTATTCCTGTCCCACTaGCCAGAACCATCTCTCATG +
Preference number: 2 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGLFLSH*PEPSLM
Trigger: CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAG...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR TCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTAAGGCAGAGCTTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: FLPEFVQLGNGRARILALRQSLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAAGCTCTGCCT...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCAGAATTGTGACCCGTTaGTGTGACGGCCTTTGTTGG +
Preference number: 2 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPRIVTR*CDGLCW
Trigger: CCAACAAAGGCCGTCACAGCAACGGGTCACAATTCT...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447468.7
3UTR-3UTR CCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGCTATTCCTGTCCCACTaGCCAGAACCATCTCTCATG +
Preference number: 2 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLLFLSH*PEPSLM
Trigger: CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAG...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR TCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGGAGTTGCTTGCAGTGTaGTATAGAATTGTGACCCGT +
Preference number: 2 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQELLAV*YRIVTR
Trigger: ACGGGTCACAATTCTATATCACACTGCAAGCAACTC...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447468.7
3UTR-3UTR GCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGGGCATCTCGGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQGISAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATGCC...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAGTGAGCTACCACACCTaGCCTCAGCCTTTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARVSYHT*PQPFLY
Trigger: ATAAAGAAAAGGCTGAGGCCAGGTGTGGTAGCTCAC...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTAGCCCAGCTGTCTAAATaGGAACCCTGGGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: FLPEFVQLGNGRARILALAQLSK*EPWGKS
Trigger: GCTCTTTCCCCAGGGTTCCCATTTAGACAGCTGGGC...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAGCAACCTACAGTGTCTaGCACGGCTTTCAAATTACA +
Preference number: 2 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARATYSV*HGFQIT
Trigger: TGTAATTTGAAAGCCGTGGCAGACACTGTAGGTTGC...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR CCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTAAGGGGCAGGACCACTaGCGTTCTATTCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSKGQDH*RSIPVP
Trigger: TGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTT...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR CCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGACCATGTTGGCCAGGATaGTCTCAATCTCTTGATCTT +
Preference number: 2 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARPCWPG*SQSLDL
Trigger: AAGATCAAGAGATTGAGACCATCCTGGCCAACATGG...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTACACGCCTGGGAACCCTaGGGAAAGAACCAAATGAAC +
Preference number: 2 (lower is better)
Translates to: FLPEFVQLGNGRARILALHAWEP*GKNQMN
Trigger: GTTCATTTGGTTCTTTCCCCAGGGTTCCCAGGCGTG...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCTCTGTGCCCCACGCCTaGGAACCCTGGGGAAAGAAC +
Preference number: 2 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCSVPHA*EPWGKN
Trigger: GTTCTTTCCCCAGGGTTCCCAGGCGTGGGGCACAGA...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCACATTCCAGACTGGATaGAGGGGAAGGGGCAGGACC +
Preference number: 2 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCTFQTG*RGRGRT
Trigger: GGTCCTGCCCCTTCCCCTTCATCCAGTCTGGAATGT...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTAGGGGAAAGAGCTAAATaGACACAGAATCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: FLPEFVQLGNGRARILALGERAK*TQNLCP
Trigger: GGGGCACAGATTCTGTGTTCATTTAGCTCTTTCCCC...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAAAGGCAGAGCTTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: QLPGLILYYRFVSVATGERQSLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAAGCTCTGCCT...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp GGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCAACCTACAGTGTCTaGCACGGCTTTCAAATTACA +
Preference number: 2 (lower is better)
Translates to: GRTTGVLFLSHWPEPSLMATYSV*HGFQIT
Trigger: TGTAATTTGAAAGCCGTGGCAGACACTGTAGGTTGC...CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR CCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTAGACAGGAAAGGAAGATaGGGAGGGATTGGGTGTAGA +
Preference number: 2 (lower is better)
Translates to: FLPEFVQLGNGRARILALDRKGR*GGIGCR
Trigger: TCTACACCCAATCCCTCCCCATCTTCCTTTCCTGTC...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGACATTCCAGACTGGATaGAGGGGAAGGGGCAGGACC +
Preference number: 2 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQTFQTG*RGRGRT
Trigger: GGTCCTGCCCCTTCCCCTTCATCCAGTCTGGAATGT...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTTGTGATATAGAATTGTaGCCCGTTGCTGTGACGGCC +
Preference number: 2 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSCDIEL*PVAVTA
Trigger: GGCCGTCACAGCAACGGGTCACAATTCTATATCACA...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447468.7
3UTR-3UTR GCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAGCACTCTCAGCCGGGTaGGGTGGCTCACGCCTTTGT +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVALSAG*GGSRLC
Trigger: ACAAAGGCGTGAGCCACCGCACCCGGCTGAGAGTGC...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCTCTCATGGCCACCCGTaGCTGCAAAGGAGTCTAGGA +
Preference number: 2 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCSHGHP*LQRSLG
Trigger: TCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGA...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTATTCAAGAGATTCTTCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: FLPEFVQLGNGRARILALFKRFF*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGAAGAATCTCTTGAA...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTGCACTCTCAGCCGGGTaGGGTGGCTCACGCCTTTGT +
Preference number: 2 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVALSAG*GGSRLC
Trigger: ACAAAGGCGTGAGCCACCGCACCCGGCTGAGAGTGC...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGTCTCATGGCCACCCGTaGCTGCAAAGGAGTCTAGGA +
Preference number: 2 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQSHGHP*LQRSLG
Trigger: TCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGA...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCTCTACACATATGTATTaGTCTTTCATTCTGTGTTGG +
Preference number: 2 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGSTHMY*SFILCW
Trigger: CCAACACAGAATGAAAGACCAATACATATGTGTAGA...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447468.7
3UTR-3UTR TCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGAATCTCTTGATCTTGTaGTCCACCTGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQNLLIL*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACAAGATCAAGAGATT...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGGCAGTGATTCCCAGATaGCTAGTGCCCAGCTGTCTA +
Preference number: 2 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQAVIPR*LVPSCL
Trigger: TAGACAGCTGGGCACTAGTCATCTGGGAATCACTGC...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAACTATTCCTGTCCCACTaGCCAGAACCATCTCTCATG +
Preference number: 2 (lower is better)
Translates to: QLPGLILYYRFVSVATGELFLSH*PEPSLM
Trigger: CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAG...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTGTGAGCTACCACACCTaGCCTCAGCCTTTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTVSYHT*PQPFLY
Trigger: ATAAAGAAAAGGCTGAGGCCAGGTGTGGTAGCTCAC...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTAGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTRVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCT...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAGGCAGGAGAATGGCATaGATCAGGGAGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVGRRMA*IREAEL
Trigger: AAGCTCTGCCTCCCTGATTCATGCCATTCTCCTGCC...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAAAGGGGCAGGACCACTaGCGTTCTATTCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVKGQDH*RSIPVP
Trigger: TGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTT...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGATCAAGAGACTGGGGCTaGCATCTCTGCAGTACTTGG +
Preference number: 2 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRSRDWG*HLCSTW
Trigger: CCAAGTACTGCAGAGATGTCAGCCCCAGTCTCTTGA...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCGCAACCTACAGTGTCTaGCACGGCTTTCAAATTACA +
Preference number: 2 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCATYSV*HGFQIT
Trigger: TGTAATTTGAAAGCCGTGGCAGACACTGTAGGTTGC...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGGACTACATTACACCATaGGGACTGGAACCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQDYITP*GLEPVP
Trigger: AGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTC...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGATCCAATAACATCACATaGGTCAGCCACCACGGACAC +
Preference number: 2 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRSNNIT*VSHHGH
Trigger: GTGTCCGTGGTGGCTGACTCATGTGATGTTATTGGA...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTGGTGGTAACAGGAGCTaGGCAAGGTCACCAATAGCA +
Preference number: 2 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVGGNRS*ARSPIA
Trigger: TGCTATTGGTGACCTTGCTCAGCTCCTGTTACCACC...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGAACTGGGGAAAATGGGTaGAAGGTACACAGGACTGCT +
Preference number: 2 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRTGENG*KVHRTA
Trigger: AGCAGTCCTGTGTACCTTTCACCCATTTTCCCCAGT...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGCCATGTTGGCCAGGATaGTCTCAATCTCTTGATCTT +
Preference number: 2 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQPCWPG*SQSLDL
Trigger: AAGATCAAGAGATTGAGACCATCCTGGCCAACATGG...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAAGCCACTGGGGAAAATaGGTGAAAGGTACACAGGAC +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVSHWGK*VKGTQD
Trigger: GTCCTGTGTACCTTTCACCCATTTTCCCCAGTGGCT...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGAACTGTAAAGGGGTACTaGAAGGGGGTCTTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRTVKGY*KGVFEV
Trigger: CACCTCAAAGACCCCCTTCCAGTACCCCTTTACAGT...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR TCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGTCCTGGCTAACATGGTaGAATCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQSWLTW*NPISTK
Trigger: TTTAGTAGAGATGGGATTTCACCATGTTAGCCAGGA...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp TCAGTTGCCCAAAAGCCACAAATTTTCTATCTAGATAAGGAGTTGCTTGCAGTGTGTGACGGCCTTTGTTaGCCATTCCAAGTACTCCTC +
Preference number: 2 (lower is better)
Translates to: SVAQKPQIFYLDKELLAVCDGLC*PFQVLL
Trigger: GAGGAGTACTTGGAATGGCCAACAAAGGCCGTCACA...CACTGCAAGCAACTCCTTATCTAGATAGAAAATTTGTGGCTTTTGGGCAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447468.7
3UTR-3UTR GCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAATATCCATTAGAAGCCTaGCTCTTTAAGACTGATGTA +
Preference number: 2 (lower is better)
Translates to: QLPGLILYYRFVSVATGEYPLEA*LFKTDV
Trigger: TACATCAGTCTTAAAGAGGCAGGCTTCTAATGGATA...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTAGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVRVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCT...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTATTACACCATGGGGACTaGAACCAGTTCCTTATGTCT +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVLHHGD*NQFLMS
Trigger: AGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAA...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTACAGTTCCTTATGTCTTaGAGTGATTCCCAGATGACT +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVQFLMS*SDSQMT
Trigger: AGTCATCTGGGAATCACTGCAAGACATAAGGAACTG...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGACAGTTCCTTATGTCTTaGAGTGATTCCCAGATGACT +
Preference number: 2 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRQFLMS*SDSQMT
Trigger: AGTCATCTGGGAATCACTGCAAGACATAAGGAACTG...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTATTCATAGGGTTGGTATaGCTCAGAGAGATAAGGATG +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVFIGLV*LREIRM
Trigger: CATCCTTATCTCTCTGAGCCATACCAACCCTATGAA...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp CCACAAGTAACAAAATTCTCAACCAACAGTAACATAAACAACACAACACAGGGCAAGTGCATGCCACCATaGCCAGCTAATTTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: PQVTKFSTNSNINNTTQGKCMPP*PANFCS
Trigger: ACTACAGAAATTAGCTGGGCATGGTGGCATGCACTT...GCCCTGTGTTGTGTTGTTTATGTTACTGTTGGTTGAGAATTTTGTTACTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR GCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAAAAAGGAAAAGCAAATaGCAGTTGTCAGGAGTTAGG +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVKRKSK*QLSGVR
Trigger: CCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTT...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAATACTCATGATAAAATaGCATCACACACATTGTACC +
Preference number: 2 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVILMIK*HHTHCT
Trigger: GGTACAATGTGTGTGATGCCATTTTATCATGAGTAT...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR CAA 90 bp TGTTGGTTACATGAATATACTCATGATAAAATGGCATCACACACATaGTACCAATGTCAGCTGCCTGGTTTGATATTGTACTACCGTTTT +
Preference number: 2 (lower is better)
Translates to: CWLHEYTHDKMASHT*YQCQLPGLILYYRF
Trigger: AAAACGGTAGTACAATATCAAACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTATATTCATGTAACCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR CCA 72 bp AGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTaGCCAGAACCATCTCTCATGGCCACCCGTGGCTGC +
Preference number: 3 (lower is better)
Translates to: RGRTTGVLFLSH*PEPSLMATRGC
Trigger: GCAGCCACGGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR-3UTR CAA 90 bp GGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGAAGATGGGGAGGGATaGGGTGTAGATGAGGCAACC +
Preference number: 3 (lower is better)
Translates to: GRTTGVLFLSHWPEPSLMEDGEG*GVDEAT
Trigger: GGTTGCCTCATCTACACCCAATCCCTCCCCATCTTC...CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR CCA 72 bp ATTCCAGACTGGATGAAGGGGAAGGGGCAGGACCACTaGCGTTCTATTCCTGTCCCACTGGCCAGAACCATC +
Preference number: 3 (lower is better)
Translates to: IPDWMKGKGQDH*RSIPVPLARTI
Trigger: GATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR TCA 72 bp AGCTGTCTAAATGGGAACCCTGGGGAAAGAGCTAAATaGACACAGAATCTGTGCCCCACGCCTGGGAACCCT +
Preference number: 3 (lower is better)
Translates to: SCLNGNPGERAK*TQNLCPTPGNP
Trigger: AGGGTTCCCAGGCGTGGGGCACAGATTCTGTGTTCATTTAGCTCTTTCCCCAGGGTTCCCATTTAGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CAA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTGAAGATGGGGAGGGATaGGGTGTAGATGAGGCAACC +
Preference number: 3 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTEDGEG*GVDEAT
Trigger: GGTTGCCTCATCTACACCCAATCCCTCCCCATCTTC...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
3UTR TCA 72 bp GGAACCAGTTCCTTATGTCTTGCAGTGATTCCCAGATaGCTAGTGCCCAGCTGTCTAAATGGGAACCCTGGG +
Preference number: 3 (lower is better)
Translates to: GTSSLCLAVIPR*LVPSCLNGNPG
Trigger: CCCAGGGTTCCCATTTAGACAGCTGGGCACTAGTCATCTGGGAATCACTGCAAGACATAAGGAACTGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR GCA 72 bp ATGAACACAGAATCTCTGCCCCACGCCTGGGAACTCTaGCTCAGTAGGTCAAGGACAAGGTCTGTTAGGTTA +
Preference number: 3 (lower is better)
Translates to: MNTESLPHAWEL*LSRSRTRSVRL
Trigger: TAACCTAACAGACCTTGTCCTTGACCTACTGAGGCAGAGTTCCCAGGCGTGGGGCAGAGATTCTGTGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR CCA 72 bp AAGAACCAAATGAACACAGAATCTCTGCCCCACGCCTaGGAACTCTGCCTCAGTAGGTCAAGGACAAGGTCT +
Preference number: 3 (lower is better)
Translates to: KNQMNTESLPHA*ELCLSRSRTRS
Trigger: AGACCTTGTCCTTGACCTACTGAGGCAGAGTTCCCAGGCGTGGGGCAGAGATTCTGTGTTCATTTGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR GCA 72 bp TTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTaGAGTGATTCCCAGATGACTAGTGCCCAGCTGTCT +
Preference number: 3 (lower is better)
Translates to: LHHGDWNQFLMS*SDSQMTSAQLS
Trigger: AGACAGCTGGGCACTAGTCATCTGGGAATCACTGCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CAA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAGTCCAGAGTAGGTGGTaGCTGGTATTGGTCCCGCAG +
Preference number: 3 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVVQSRW*LVLVPQ
Trigger: CTGCGGGACCAATACCAGCAACCACCTACTCTGGAC...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CAA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTGAAGATGGGGAGGGATaGGGTGTAGATGAGGCAACC +
Preference number: 3 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVEDGEG*GVDEAT
Trigger: GGTTGCCTCATCTACACCCAATCCCTCCCCATCTTC...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CAA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAAAAGGAGTCTAGGAAATaGAGTACCACCCTTTCACAG +
Preference number: 3 (lower is better)
Translates to: QLPGLILYYRFVSVATGEKESRK*STTLSQ
Trigger: CTGTGAAAGGGTGGTACTCAATTTCCTAGACTCCTT...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR TCA 72 bp ACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTaGGAATGTAACATAGGCGGTCTGCTTCCTCCCATC +
Preference number: 3 (lower is better)
Translates to: THILNTMLLWVS*ECNIGGLLPPI
Trigger: GATGGGAGGAAGCAGACCGCCTATGTTACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CAA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCCCAGGTGATATGAGCTaGAGAACTTTAGATTACAGA +
Preference number: 3 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCPGDMS*RTLDYR
Trigger: TCTGTAATCTAAAGTTCTCAAGCTCATATCACCTGG...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR-3UTR CAA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAAGCCTACGCCTACTTTaGGCAAGCCTCATATCCATT +
Preference number: 3 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVSLRLL*ASLISI
Trigger: AATGGATATGAGGCTTGCCAAAAGTAGGCGTAGGCT...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR TCA 72 bp CAAATTTTCTATCTAGATAAGGAGTTGCTTGCAGTGTaGTATAGAATTGTGACCCGTTGCTGTGACGGCCTT +
Preference number: 3 (lower is better)
Translates to: QIFYLDKELLAV*YRIVTRCCDGL
Trigger: AAGGCCGTCACAGCAACGGGTCACAATTCTATATCACACTGCAAGCAACTCCTTATCTAGATAGAAAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447468.7
3UTR-3UTR CAA 90 bp CCACAAGTAACAAAATTCTCAACCAACAGTAACATAAACAACACAACACAGGGCAAGGAGTCTAGGAAATaGAGTACCACCCTTTCACAG +
Preference number: 3 (lower is better)
Translates to: PQVTKFSTNSNINNTTQGKESRK*STTLSQ
Trigger: CTGTGAAAGGGTGGTACTCAATTTCCTAGACTCCTT...GCCCTGTGTTGTGTTGTTTATGTTACTGTTGGTTGAGAATTTTGTTACTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR GCA 72 bp GCCTACTTTTGGCAAGCCTCATATCCATTAGAAGCCTaGCTCTTTAAGACTGATGTAAATAGAGATTGTTCT +
Preference number: 3 (lower is better)
Translates to: AYFWQASYPLEA*LFKTDVNRDCS
Trigger: AGAACAATCTCTATTTACATCAGTCTTAAAGAGGCAGGCTTCTAATGGATATGAGGCTTGCCAAAAGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR CCA 72 bp TATAGTGTTGGTTACATGAATATACTCATGATAAAATaGCATCACACACATTGTACCAATGTCAGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: YSVGYMNILMIK*HHTHCTNVSCL
Trigger: CAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTATATTCATGTAACCAACACTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGCCCACCACCTTCACCTaGAGCGGCCGCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQPTTFT*SGRSGS
Trigger: GCTGCCGGAGCGGCCGCTGCAGGTGAAGGTGGTGGG...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCCCACCACCTTCACCTaGAGCGGCCGCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGPTTFT*SGRSGS
Trigger: GCTGCCGGAGCGGCCGCTGCAGGTGAAGGTGGTGGG...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCGTCGAGGGCGGCCCGTaGCGGCTGGGCCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGVEGGP*RLGLSS
Trigger: TGAGGAAAGGCCCAGCCGCCACGGGCCGCCCTCGAC...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR GCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAGGCATCTCGGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARGISAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATGCC...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCGGCCCTTACCGAGCCTaGGCGCCCGGATTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGGPYRA*APGFRQ
Trigger: CTGCCGAAATCCGGGCGCCCAGGCTCGGTAAGGGCC...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTAGGCGGCCCGCCTGATTaGGAACAGCCGGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: FLPEFVQLGNGRARILALGGPPD*EQPAGC
Trigger: GCAACCGGCCGGCTGTTCCCAATCAGGCGGGCCGCC...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCCAGGCTGGAGTGCAGTaGCGGCATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPQAGVQ*RHLGSL
Trigger: CAGTGAGCCGAGATGCCGCCACTGCACTCCAGCCTG...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCTCTCTGCCCCACGCCTaGGAACTCTGCCTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGSLPHA*ELCLSR
Trigger: CCTACTGAGGCAGAGTTCCCAGGCGTGGGGCAGAGA...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTCCCGGGGACGCCCGGTaGCCCCAAACACTGCGCGTC +
Preference number: 4 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTPGDAR*PQTLRV
Trigger: GACGCGCAGTGTTTGGGGTCACCGGGCGTCCCCGGG...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR GCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTGAACAGCCGGCCGGTTaGCGGGGGAACGCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSEQPAG*RGNAGV
Trigger: GACTCCCGCGTTCCCCCGGCAACCGGCCGGCTGTTC...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR GCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCGCACTCTCAGCCGGGTaGGGTGGCTCACGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGALSAG*GGSRLC
Trigger: ACAAAGGCGTGAGCCACCGCACCCGGCTGAGAGTGC...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCTCTGTGCCCCACGCCTaGGAACCCTGGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPSVPHA*EPWGKN
Trigger: GTTCTTTCCCCAGGGTTCCCAGGCGTGGGGCACAGA...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAGAAAGTTGGGGCAGCTaGAGAGCCCCACCACCTTCA +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARESWGS*RAPPPS
Trigger: TGAAGGTGGTGGGGCTCTTCAGCTGCCCCAACTTTC...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGTGTGACCCGTTGCTGTaGCGGCCTTTGTTGGCCATT +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQCDPLL*RPLLAI
Trigger: AATGGCCAACAAAGGCCGTCACAGCAACGGGTCACA...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTCCCACCACCTTCACCTaGAGCGGCCGCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTPTTFT*SGRSGS
Trigger: GCTGCCGGAGCGGCCGCTGCAGGTGAAGGTGGTGGG...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTAGGTGACCCCAAACACTaGGCGTCGCTCCGGCAACCG +
Preference number: 4 (lower is better)
Translates to: FLPEFVQLGNGRARILALGDPKH*ASLRQP
Trigger: CGGTTGCCGGAGCGACGCGCAGTGTTTGGGGTCACC...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTAGAAGAAGGAACGGTCTaGGGAGAAGGCGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FLPEFVQLGNGRARILALEEGTV*GEGAAG
Trigger: GCCGGCGGCGCCTTCTCCCCAGACCGTTCCTTCTTC...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCAAGGGGCAGGACCACTaGCGTTCTATTCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGKGQDH*RSIPVP
Trigger: TGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTT...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGATGTGACCCGTTGCTGTaGCGGCCTTTGTTGGCCATT +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARCDPLL*RPLLAI
Trigger: AATGGCCAACAAAGGCCGTCACAGCAACGGGTCACA...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCACATTCCAGACTGGATaGAGGGGAAGGGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGTFQTG*RGRGRT
Trigger: GGTCCTGCCCCTTCCCCTTCATCCAGTCTGGAATGT...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAGGCAGGAGAATGGCATaGATCAGGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARGRRMA*IREAEL
Trigger: AAGCTCTGCCTCCCTGATTCATGCCATTCTCCTGCC...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCTCGTGGGCCCATTTCTaGAGATCCAATGCATCACCC +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGSWAHF*RSNASP
Trigger: GGGTGATGCATTGGATCTGCAGAAATGGGCCCACGA...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCCAACTTTGCGCCTGTTaGTGGGCCGCCGGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCQLCAC*WAAGAR
Trigger: CCGCGCGCCGGCGGCCCAGCAACAGGCGCAAAGTTG...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR GCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTGGCATCTCGGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSGISAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATGCC...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGTCTCATGGCCACCCGTaGCTGCAAAGGAGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLSHGHP*LQRSLG
Trigger: TCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGA...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCTCTCATGGCCACCCGTaGCTGCAAAGGAGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPSHGHP*LQRSLG
Trigger: TCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGA...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCAAGGGGCAGGACCACTaGCGTTCTATTCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPKGQDH*RSIPVP
Trigger: TGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTT...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAGCTGAGGCAGGAGAATaGCATGAATCAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARAEAGE*HESGRQ
Trigger: CTGCCTCCCTGATTCATGCCATTCTCCTGCCTCAGC...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAGAGTCGGGCCCGACCTaGGCCACGCGGGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIESGPT*ATRAWC
Trigger: GCACCAAGCCCGCGTGGCTCAGGTCGGGCCCGACTC...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR TCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAGGTTGGCGGCCCGCCTaGTTGGGAACAGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIGWRPA*LGTAGR
Trigger: CCGGCCGGCTGTTCCCAATCAGGCGGGCCGCCAACC...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR TCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCTGTGATATAGAATTGTaGCCCGTTGCTGTGACGGCC +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGCDIEL*PVAVTA
Trigger: GGCCGTCACAGCAACGGGTCACAATTCTATATCACA...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGAATCTCTTGATCTTGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLNLLIL*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACAAGATCAAGAGATT...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGTCAAGAGACTGGGGCTaGCATCTCTGCAGTACTTGG +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLSRDWG*HLCSTW
Trigger: CCAAGTACTGCAGAGATGTCAGCCCCAGTCTCTTGA...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCTCCAATAACATCACATaGGTCAGCCACCACGGACAC +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGSNNIT*VSHHGH
Trigger: GTGTCCGTGGTGGCTGACTCATGTGATGTTATTGGA...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGGGGGAAAGAGCTAAATaGACACAGAATCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQGERAK*TQNLCP
Trigger: GGGGCACAGATTCTGTGTTCATTTAGCTCTTTCCCC...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCGGGGAAAGAGCTAAATaGACACAGAATCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGGERAK*TQNLCP
Trigger: GGGGCACAGATTCTGTGTTCATTTAGCTCTTTCCCC...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGGTGGTAACAGGAGCTaGGCAAGGTCACCAATAGCA +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLGGNRS*ARSPIA
Trigger: TGCTATTGGTGACCTTGCTCAGCTCCTGTTACCACC...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCGGCAGGAGAATGGCATaGATCAGGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGGRRMA*IREAEL
Trigger: AAGCTCTGCCTCCCTGATTCATGCCATTCTCCTGCC...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGTCGTGGGCCCATTTCTaGAGATCCAATGCATCACCC +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLSWAHF*RSNASP
Trigger: GGGTGATGCATTGGATCTGCAGAAATGGGCCCACGA...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGGACAGGAAAGGAAGATaGGGAGGGATTGGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQDRKGR*GGIGCR
Trigger: TCTACACCCAATCCCTCCCCATCTTCCTTTCCTGTC...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGCTATTCCTGTCCCACTaGCCAGAACCATCTCTCATG +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQLFLSH*PEPSLM
Trigger: CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAG...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGAAGTCCAGAGTAGGTaGTTGCTGGTATTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLEVQSR*LLVLVP
Trigger: CGGGACCAATACCAGCAACCACCTACTCTGGACTTC...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCCACGCCTGGGAACCCTaGGGAAAGAACCAAATGAAC +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPHAWEP*GKNQMN
Trigger: GTTCATTTGGTTCTTTCCCCAGGGTTCCCAGGCGTG...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp GGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCCAGCTGTCTAAATaGGAACCCTGGGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GRTTGVLFLSHWPEPSLMAQLSK*EPWGKS
Trigger: GCTCTTTCCCCAGGGTTCCCATTTAGACAGCTGGGC...CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCAATCTCTTGATCTTGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGNLLIL*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACAAGATCAAGAGATT...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCGCAGTGATTCCCAGATaGCTAGTGCCCAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGAVIPR*LVPSCL
Trigger: TAGACAGCTGGGCACTAGTCATCTGGGAATCACTGC...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCTGGAAGGGGGTCTTTaGGGTGCTGGAAAGGTTCTA +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGLEGGL*GAGKVL
Trigger: TAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAG...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCTGTGACGGCCTTTGTTaGCCATTCCAAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPCDGLC*PFQVLL
Trigger: GAGGAGTACTTGGAATGGCCAACAAAGGCCGTCACA...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGATGTGACGGCCTTTGTTaGCCATTCCAAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARCDGLC*PFQVLL
Trigger: GAGGAGTACTTGGAATGGCCAACAAAGGCCGTCACA...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGACAGGAAAGGAAGATaGGGAGGGATTGGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLDRKGR*GGIGCR
Trigger: TCTACACCCAATCCCTCCCCATCTTCCTTTCCTGTC...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGACTATTCCTGTCCCACTaGCCAGAACCATCTCTCATG +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARLFLSH*PEPSLM
Trigger: CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAG...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCTCCAATAACATCACATaGGTCAGCCACCACGGACAC +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGSNNIT*VSHHGH
Trigger: GTGTCCGTGGTGGCTGACTCATGTGATGTTATTGGA...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCTTGCTCTGGGTCAGTTaGGAATGTAACATAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPLLWVS*ECNIGG
Trigger: ACCGCCTATGTTACATTCTCAACTGACCCAGAGCAA...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCAGAATTGTGACCCGTTaGTGTGACGGCCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGRIVTR*CDGLCW
Trigger: CCAACAAAGGCCGTCACAGCAACGGGTCACAATTCT...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCGCAACCTACAGTGTCTaGCACGGCTTTCAAATTACA +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGATYSV*HGFQIT
Trigger: TGTAATTTGAAAGCCGTGGCAGACACTGTAGGTTGC...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp GGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGTGTGACGGCCTTTGTTaGCCATTCCAAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: GRTTGVLFLSHWPEPSLMCDGLC*PFQVLL
Trigger: GAGGAGTACTTGGAATGGCCAACAAAGGCCGTCACA...CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCGACAGGAAAGGAAGATaGGGAGGGATTGGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGDRKGR*GGIGCR
Trigger: TCTACACCCAATCCCTCCCCATCTTCCTTTCCTGTC...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGCCATGTTGGCCAGGATaGTCTCAATCTCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQPCWPG*SQSLDL
Trigger: AAGATCAAGAGATTGAGACCATCCTGGCCAACATGG...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCTTACACCATGGGGACTaGAACCAGTTCCTTATGTCT +
Preference number: 4 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGLHHGD*NQFLMS
Trigger: AGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAA...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTGAAAGTTGGGGCAGCTaGAGAGCCCCACCACCTTCA +
Preference number: 4 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTESWGS*RAPPPS
Trigger: TGAAGGTGGTGGGGCTCTTCAGCTGCCCCAACTTTC...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGATTTCTGCAGATCCAATaGATCACCCAGAAACTGACC +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARFLQIQ*ITQKLT
Trigger: GGTCAGTTTCTGGGTGATGCATTGGATCTGCAGAAA...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGGAGTGCGTCATAAAGTaGAGAGGGTTTAATGTCAAC +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQECVIK*RGFNVN
Trigger: GTTGACATTAAACCCTCTGCACTTTATGACGCACTC...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGACGTTGAGAAAACCCTaGTTTTCCTGTGCACAAGAC +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLTLRKP*FSCAQD
Trigger: GTCTTGTGCACAGGAAAAGCAGGGTTTTCTCAACGT...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATACCTGTGCGCGCCGCCTaGGAAGAAGGAACGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIPVRAA*EEGTVW
Trigger: CCAGACCGTTCCTTCTTCGCAGGCGGCGCGCACAGG...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR GCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCGCAACCTACAGTGTCTaGCACGGCTTTCAAATTACA +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPATYSV*HGFQIT
Trigger: TGTAATTTGAAAGCCGTGGCAGACACTGTAGGTTGC...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGGCACTCTCAGCCGGGTaGGGTGGCTCACGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQALSAG*GGSRLC
Trigger: ACAAAGGCGTGAGCCACCGCACCCGGCTGAGAGTGC...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp GGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGTGAGCTACCACACCTaGCCTCAGCCTTTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GRTTGVLFLSHWPEPSLMVSYHT*PQPFLY
Trigger: ATAAAGAAAAGGCTGAGGCCAGGTGTGGTAGCTCAC...CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCAGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGRVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCT...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAATCTCTGCCCCACGCCTaGGAACTCTGCCTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: QLPGLILYYRFVSVATGESLPHA*ELCLSR
Trigger: CCTACTGAGGCAGAGTTCCCAGGCGTGGGGCAGAGA...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCGACTACATTACACCATaGGGACTGGAACCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGDYITP*GLEPVP
Trigger: AGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTC...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCTACGCCTACTTTTaGCAAGCCTCATATCCATTA +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLAYAYF*QASYPL
Trigger: TAATGGATATGAGGCTTGCCAAAAGTAGGCGTAGGC...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp GTGACCCGTTGCTGTGACGGCCTTTGTTGGCCATTCCAAGTACTCCTCTTTTATTGTGACCCGTTGCTGTaGCGGCCTTTGTTGGCCATT +
Preference number: 4 (lower is better)
Translates to: VTRCCDGLCWPFQVLLFYCDPLL*RPLLAI
Trigger: AATGGCCAACAAAGGCCGTCACAGCAACGGGTCACA...ATAAAAGAGGAGTACTTGGAATGGCCAACAAAGGCCGTCACAGCAACGGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447468.7
CDS-3UTR TCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCGAGTTGCTTGCAGTGTaGTATAGAATTGTGACCCGT +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGELLAV*YRIVTR
Trigger: ACGGGTCACAATTCTATATCACACTGCAAGCAACTC...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTCTGGAAGGGGGTCTTTaGGGTGCTGGAAAGGTTCTA +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSLEGGL*GAGKVL
Trigger: TAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAG...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp GGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGTTTCTGCAGATCCAATaGATCACCCAGAAACTGACC +
Preference number: 4 (lower is better)
Translates to: GRTTGVLFLSHWPEPSLMFLQIQ*ITQKLT
Trigger: GGTCAGTTTCTGGGTGATGCATTGGATCTGCAGAAA...CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTACTTGGTGCCCACCTGTaGGCGCCGCCTGCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVLGAHL*APPAKK
Trigger: CTTCTTCGCAGGCGGCGCGCACAGGTGGGCACCAAG...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR GCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCAGGGGGTCTTTGAGGTaGTGGAAAGGTTCTATATTT +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPRGSLR*WKGSIF
Trigger: AAATATAGAACCTTTCCAGCACCTCAAAGACCCCCT...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAAAAGGAAAAGCAAATaGCAGTTGTCAGGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQKRKSK*QLSGVR
Trigger: CCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTT...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTCCGAGATCACGCCATTaGACTCCAGCATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTPRSRH*TPAWVT
Trigger: TGTCACCCATGCTGGAGTGCAATGGCGTGATCTCGG...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447468.7
CDS-3UTR CCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGAGCGGCCCGTGGCGGCTaGGCCTTTCCTCAACTTTGC +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRAARGG*AFPQLC
Trigger: GCAAAGTTGAGGAAAGGCCCAGCCGCCACGGGCCGC...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CCA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTAAGGGGCAGGACCACTaGCGTTCTATTCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTKGQDH*RSIPVP
Trigger: TGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTT...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGCCTGTGCACAAGACCTaGAAATTTTTACATGTTTTG +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQPVHKT*KFLHVL
Trigger: CAAAACATGTAAAAATTTTCAGGTCTTGTGCACAGG...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp GATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGTATCCATTAGAAGCCTaGCTCTTTAAGACTGATGTA +
Preference number: 4 (lower is better)
Translates to: DEGEGAGPLAFYSCPTGQYPLEA*LFKTDV
Trigger: TACATCAGTCTTAAAGAGGCAGGCTTCTAATGGATA...CTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGACAGGCTGGAGTGCAGTaGCGGCATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRQAGVQ*RHLGSL
Trigger: CAGTGAGCCGAGATGCCGCCACTGCACTCCAGCCTG...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCTTCATAGGGTTGGTATaGCTCAGAGAGATAAGGATG +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGFIGLV*LREIRM
Trigger: CATCCTTATCTCTCTGAGCCATACCAACCCTATGAA...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTAGCCACTGGGGAAAATaGGTGAAAGGTACACAGGAC +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSSHWGK*VKGTQD
Trigger: GTCCTGTGTACCTTTCACCCATTTTCCCCAGTGGCT...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAACCCAGGTTTCATTTTTaGGTTCCTCAGCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: QLPGLILYYRFVSVATGEPRFHF*VPQRRS
Trigger: AGAGCGCCGCTGAGGAACTCAAAAATGAAACCTGGG...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR TCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGCCTGTGCACAAGACCTaGAAATTTTTACATGTTTTG +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLPVHKT*KFLHVL
Trigger: CAAAACATGTAAAAATTTTCAGGTCTTGTGCACAGG...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR TCA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTAGAGTTGCTTGCAGTGTaGTATAGAATTGTGACCCGT +
Preference number: 4 (lower is better)
Translates to: FLPEFVQLGNGRARILALELLAV*YRIVTR
Trigger: ACGGGTCACAATTCTATATCACACTGCAAGCAACTC...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCTCGTGGGCCCATTTCTaGAGATCCAATGCATCACCC +
Preference number: 4 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCSWAHF*RSNASP
Trigger: GGGTGATGCATTGGATCTGCAGAAATGGGCCCACGA...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCTATCCATTAGAAGCCTaGCTCTTTAAGACTGATGTA +
Preference number: 4 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPYPLEA*LFKTDV
Trigger: TACATCAGTCTTAAAGAGGCAGGCTTCTAATGGATA...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGATTCATCTTCAAATGTTaGACCATAAATCGACTCTCC +
Preference number: 4 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARFIFKC*TINRLS
Trigger: GGAGAGTCGATTTATGGTCCAACATTTGAAGATGAA...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTGTGAGCTACCACACCTaGCCTCAGCCTTTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSVSYHT*PQPFLY
Trigger: ATAAAGAAAAGGCTGAGGCCAGGTGTGGTAGCTCAC...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTAGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSRVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACCCT...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGAGAAAGTTGGGGCAGCTaGAGAGCCCCACCACCTTCA +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRESWGS*RAPPPS
Trigger: TGAAGGTGGTGGGGCTCTTCAGCTGCCCCAACTTTC...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTAGTCTTATGCCACGTTaGGAAAACCCTGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSSLMPR*ENPAFP
Trigger: AGGAAAAGCAGGGTTTTCTCAACGTGGCATAAGACT...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCACTTCTCCCTGCGACTaGGGATCTTCAACCTCAACT +
Preference number: 4 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCTSPCD*GSSTST
Trigger: AGTTGAGGTTGAAGATCCGCAGTCGCAGGGAGAAGT...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CCA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGTCTACACATATGTATTaGTCTTTCATTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLSTHMY*SFILCW
Trigger: CCAACACAGAATGAAAGACCAATACATATGTGTAGA...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAAACTGTAAAGGGGTACTaGAAGGGGGTCTTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: QLPGLILYYRFVSVATGETVKGY*KGVFEV
Trigger: CACCTCAAAGACCCCCTTCCAGTACCCCTTTACAGT...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATACAGAGGGCAGGGGAGTaGGTTGACTGTAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIQRAGE*VDCKGV
Trigger: TACCCCTTTACAGTCAACCCACTCCCCTGCCCTCTG...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTACATTCCAGACTGGATaGAGGGGAAGGGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVTFQTG*RGRGRT
Trigger: GGTCCTGCCCCTTCCCCTTCATCCAGTCTGGAATGT...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAGGTGGTAACAGGAGCTaGGCAAGGTCACCAATAGCA +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIGGNRS*ARSPIA
Trigger: TGCTATTGGTGACCTTGCTCAGCTCCTGTTACCACC...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGACTGGGGAAAATGGGTaGAAGGTACACAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQTGENG*KVHRTA
Trigger: AGCAGTCCTGTGTACCTTTCACCCATTTTCCCCAGT...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CCACAAGTAACAAAATTCTCAACCAACAGTAACATAAACAACACAACACAGGGCGCCTTTCCTCAACTTTaGGCCTGTTGCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PQVTKFSTNSNINNTTQGAFPQL*ACCWAA
Trigger: GGCGGCCCAGCAACAGGCGCAAAGTTGAGGAAAGGC...GCCCTGTGTTGTGTTGTTTATGTTACTGTTGGTTGAGAATTTTGTTACTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR GCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTCAGTTCCTTATGTCTTaGAGTGATTCCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSQFLMS*SDSQMT
Trigger: AGTCATCTGGGAATCACTGCAAGACATAAGGAACTG...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTAGGGGGTCTTTGAGGTaGTGGAAAGGTTCTATATTT +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSRGSLR*WKGSIF
Trigger: AAATATAGAACCTTTCCAGCACCTCAAAGACCCCCT...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCTCTACACATATGTATTaGTCTTTCATTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QDHWRSIPVPLARTISHGSTHMY*SFILCW
Trigger: CCAACACAGAATGAAAGACCAATACATATGTGTAGA...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAGAAGTCCAGAGTAGGTaGTTGCTGGTATTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIEVQSR*LLVLVP
Trigger: CGGGACCAATACCAGCAACCACCTACTCTGGACTTC...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTTGTAATGTAGTCTTATaGCACGTTGAGAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSCNVVL*HVEKTL
Trigger: CAGGGTTTTCTCAACGTGGCATAAGACTACATTACA...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR GCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAAGAATTGTGACCCGTTaGTGTGACGGCCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIRIVTR*CDGLCW
Trigger: CCAACAAAGGCCGTCACAGCAACGGGTCACAATTCT...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAAGCAACCTACAGTGTCTaGCACGGCTTTCAAATTACA +
Preference number: 4 (lower is better)
Translates to: QLPGLILYYRFVSVATGEATYSV*HGFQIT
Trigger: TGTAATTTGAAAGCCGTGGCAGACACTGTAGGTTGC...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAATTACACCATGGGGACTaGAACCAGTTCCTTATGTCT +
Preference number: 4 (lower is better)
Translates to: QLPGLILYYRFVSVATGELHHGD*NQFLMS
Trigger: AGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAA...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTGCTGAGGCAGGAGAATaGCATGAATCAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVAEAGE*HESGRQ
Trigger: CTGCCTCCCTGATTCATGCCATTCTCCTGCCTCAGC...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAACTGTAAAGGGGTACTaGAAGGGGGTCTTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSITVKGY*KGVFEV
Trigger: CACCTCAAAGACCCCCTTCCAGTACCCCTTTACAGT...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTCAGAGGGCAGGGGAGTaGGTTGACTGTAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVQRAGE*VDCKGV
Trigger: TACCCCTTTACAGTCAACCCACTCCCCTGCCCTCTG...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp GTGACCCGTTGCTGTGACGGCCTTTGTTGGCCATTCCAAGTACTCCTCTTTTATTCCGTCTTCAAATGTTaGACCATAAATCGACTCTCC +
Preference number: 4 (lower is better)
Translates to: VTRCCDGLCWPFQVLLFYSVFKC*TINRLS
Trigger: GGAGAGTCGATTTATGGTCCAACATTTGAAGACGGA...ATAAAAGAGGAGTACTTGGAATGGCCAACAAAGGCCGTCACAGCAACGGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447468.7
CDS-3UTR TCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGATGTGATATAGAATTGTaGCCCGTTGCTGTGACGGCC +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRCDIEL*PVAVTA
Trigger: GGCCGTCACAGCAACGGGTCACAATTCTATATCACA...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTTCAAGAGACTGGGGCTaGCATCTCTGCAGTACTTGG +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVSRDWG*HLCSTW
Trigger: CCAAGTACTGCAGAGATGTCAGCCCCAGTCTCTTGA...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTGCAGTGATTCCCAGATaGCTAGTGCCCAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVAVIPR*LVPSCL
Trigger: TAGACAGCTGGGCACTAGTCATCTGGGAATCACTGC...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTTGTAATGTAGTCTTATaGCACGTTGAGAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTCNVVL*HVEKTL
Trigger: CAGGGTTTTCTCAACGTGGCATAAGACTACATTACA...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGACTATTCCTGTCCCACTaGCCAGAACCATCTCTCATG +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRLFLSH*PEPSLM
Trigger: CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAG...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTCACGCCTGGGAACCCTaGGGAAAGAACCAAATGAAC +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVHAWEP*GKNQMN
Trigger: GTTCATTTGGTTCTTTCCCCAGGGTTCCCAGGCGTG...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGGCCTACGCCTACTTTTaGCAAGCCTCATATCCATTA +
Preference number: 4 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQAYAYF*QASYPL
Trigger: TAATGGATATGAGGCTTGCCAAAAGTAGGCGTAGGC...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
3UTR CAA 72 bp CACACATTGTACCAATGTCAGCTGCCTGGTTTGATATaGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: HTLYQCQLPGLI*YYRFVSVATGE
Trigger: TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTGACATTGGTACAATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGATTGCTCTGGGTCAGTTaGGAATGTAACATAGGCGGT +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRLLWVS*ECNIGG
Trigger: ACCGCCTATGTTACATTCTCAACTGACCCAGAGCAA...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCTGTAATGTAGTCTTATaGCACGTTGAGAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCCNVVL*HVEKTL
Trigger: CAGGGTTTTCTCAACGTGGCATAAGACTACATTACA...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTAGAATTGTGACCCGTTaGTGTGACGGCCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVRIVTR*CDGLCW
Trigger: CCAACAAAGGCCGTCACAGCAACGGGTCACAATTCT...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCAAAAGGAAAAGCAAATaGCAGTTGTCAGGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCKRKSK*QLSGVR
Trigger: CCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTT...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGTTCATAGGGTTGGTATaGCTCAGAGAGATAAGGATG +
Preference number: 4 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQFIGLV*LREIRM
Trigger: CATCCTTATCTCTCTGAGCCATACCAACCCTATGAA...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTATACTCATGATAAAATaGCATCACACACATTGTACC +
Preference number: 4 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSILMIK*HHTHCT
Trigger: GGTACAATGTGTGTGATGCCATTTTATCATGAGTAT...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CCACAAGTAACAAAATTCTCAACCAACAGTAACATAAACAACACAACACAGGGCACTGGGGAAAATGGGTaGAAGGTACACAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PQVTKFSTNSNINNTTQGTGENG*KVHRTA
Trigger: AGCAGTCCTGTGTACCTTTCACCCATTTTCCCCAGT...GCCCTGTGTTGTGTTGTTTATGTTACTGTTGGTTGAGAATTTTGTTACTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAGAGTGCGTCATAAAGTaGAGAGGGTTTAATGTCAAC +
Preference number: 4 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIECVIK*RGFNVN
Trigger: GTTGACATTAAACCCTCTGCACTTTATGACGCACTC...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAACGTTGAGAAAACCCTaGTTTTCCTGTGCACAAGAC +
Preference number: 4 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVTLRKP*FSCAQD
Trigger: GTCTTGTGCACAGGAAAAGCAGGGTTTTCTCAACGT...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGAAAGTGCATGCCACCATaGCCAGCTAATTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRKCMPP*PANFCS
Trigger: ACTACAGAAATTAGCTGGGCATGGTGGCATGCACTT...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTATTCAAGAGATTCTTCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVFKRFF*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGAAGAATCTCTTGAA...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAATTCTTAACACTATGTTaGTCTGGGTCAGTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: QLPGLILYYRFVSVATGEFLTLC*SGSVEN
Trigger: ATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAA...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCTTCATCTTCAAATGTTaGACCATAAATCGACTCTCC +
Preference number: 4 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCFIFKC*TINRLS
Trigger: GGAGAGTCGATTTATGGTCCAACATTTGAAGATGAA...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CCACAAGTAACAAAATTCTCAACCAACAGTAACATAAACAACACAACACAGGGCCGGAAAAATCCTCAGTaGGTGCGTCATAAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PQVTKFSTNSNINNTTQGRKNPQ*VRHKVQ
Trigger: CTGCACTTTATGACGCACTCACTGAGGATTTTTCCG...GCCCTGTGTTGTGTTGTTTATGTTACTGTTGGTTGAGAATTTTGTTACTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp TCAGTTGCCCAAAAGCCACAAATTTTCTATCTAGATAAGGAGTTGCTTGCAGTGAGTCTTATGCCACGTTaGGAAAACCCTGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SVAQKPQIFYLDKELLAVSLMPR*ENPAFP
Trigger: AGGAAAAGCAGGGTTTTCTCAACGTGGCATAAGACT...CACTGCAAGCAACTCCTTATCTAGATAGAAAATTTGTGGCTTTTGGGCAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000447468.7
CDS-3UTR TCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTAGTCTTATGCCACGTTaGGAAAACCCTGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVSLMPR*ENPAFP
Trigger: AGGAAAAGCAGGGTTTTCTCAACGTGGCATAAGACT...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGAGAGTGCGTCATAAAGTaGAGAGGGTTTAATGTCAAC +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRECVIK*RGFNVN
Trigger: GTTGACATTAAACCCTCTGCACTTTATGACGCACTC...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTTTCAAGAGATTCTTCTaGCTCAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVFKRFF*LSFPSS
Trigger: GCTACTTGGGAAGCTGAGGCAGAAGAATCTCTTGAA...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp ATTAAAAGGAAAAGCAAATGCCAGTTGTCAGGAGTTAGGGATGGCAGAGGGCAGTTCTTAACACTATGTTaGTCTGGGTCAGTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: IKRKSKCQLSGVRDGRGQFLTLC*SGSVEN
Trigger: ATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAA...CTGCCCTCTGCCATCCCTAACTCCTGACAACTGGCATTTGCTTTTCCTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCATACTCATGATAAAATaGCATCACACACATTGTACC +
Preference number: 4 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCILMIK*HHTHCT
Trigger: GGTACAATGTGTGTGATGCCATTTTATCATGAGTAT...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CCA 90 bp CCACAAGTAACAAAATTCTCAACCAACAGTAACATAAACAACACAACACAGGGCCCATGTTGGCCAGGATaGTCTCAATCTCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: PQVTKFSTNSNINNTTQGPCWPG*SQSLDL
Trigger: AAGATCAAGAGATTGAGACCATCCTGGCCAACATGG...GCCCTGTGTTGTGTTGTTTATGTTACTGTTGGTTGAGAATTTTGTTACTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR TCA 90 bp CAATCTTATGTGGTAGGTACCACTGTTTCTCAGATGAAGGAATTGAGGCACAGACCTGTGCACAAGACCTaGAAATTTTTACATGTTTTG +
Preference number: 4 (lower is better)
Translates to: QSYVVGTTVSQMKELRHRPVHKT*KFLHVL
Trigger: CAAAACATGTAAAAATTTTCAGGTCTTGTGCACAGG...TCTGTGCCTCAATTCCTTCATCTGAGAAACAGTGGTACCTACCACATAAGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp CCACAAGTAACAAAATTCTCAACCAACAGTAACATAAACAACACAACACAGGGCCAGTTCCTTATGTCTTaGAGTGATTCCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: PQVTKFSTNSNINNTTQGQFLMS*SDSQMT
Trigger: AGTCATCTGGGAATCACTGCAAGACATAAGGAACTG...GCCCTGTGTTGTGTTGTTTATGTTACTGTTGGTTGAGAATTTTGTTACTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR GCA 90 bp TCAGTTGCCCAAAAGCCACAAATTTTCTATCTAGATAAGGAGTTGCTTGCAGTGAAAAACACGAAATCATaGTTGGTGTCTCTTAAGAAC +
Preference number: 4 (lower is better)
Translates to: SVAQKPQIFYLDKELLAVKNTKS*LVSLKN
Trigger: GTTCTTAAGAGACACCAAGCATGATTTCGTGTTTTT...CACTGCAAGCAACTCCTTATCTAGATAGAAAATTTGTGGCTTTTGGGCAACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447468.7
CDS-3UTR GCA 90 bp CCACAAGTAACAAAATTCTCAACCAACAGTAACATAAACAACACAACACAGGGCAAAAACACGAAATCATaGTTGGTGTCTCTTAAGAAC +
Preference number: 4 (lower is better)
Translates to: PQVTKFSTNSNINNTTQGKNTKS*LVSLKN
Trigger: GTTCTTAAGAGACACCAAGCATGATTTCGTGTTTTT...GCCCTGTGTTGTGTTGTTTATGTTACTGTTGGTTGAGAATTTTGTTACTTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS GCA 90 bp GGCGGGTCGAGGGCGGCCCGTGGCGGCTGGGCCTTTCCTCAACTTTaGGCCTGTTGCTGGGCCGCCGGCGCGCGGGCGGCCGCGACCGCC +
Preference number: 5 (lower is better)
Translates to: GGSRAARGGWAFPQL*ACCWAAGARAAATA
Trigger: GGCGGTCGCGGCCGCCCGCGCGCCGGCGGCCCAGCAACAGGCGCAAAGTTGAGGAAAGGCCCAGCCGCCACGGGCCGCCCTCGACCCGCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS TCA 90 bp AACAGCCGGCCGGTTGCCGGGGGAACGCGGGAGTCGGGCCCGACCTaGGCCACGCGGGCTTGGTGCCCACCTGTGCGCGCCGCCTGCGAA +
Preference number: 5 (lower is better)
Translates to: NSRPVAGGTRESGPT*ATRAWCPPVRAACE
Trigger: TTCGCAGGCGGCGCGCACAGGTGGGCACCAAGCCCGCGTGGCTCAGGTCGGGCCCGACTCCCGCGTTCCCCCGGCAACCGGCCGGCTGTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS GCA 90 bp CCTTTCCGGGTTGGCGGCCCGCCTGATTGGGAACAGCCGGCCGGTTaGCGGGGGAACGCGGGAGTCGGGCCCGACCTGAGCCACGCGGGC +
Preference number: 5 (lower is better)
Translates to: PFRVGGPPDWEQPAG*RGNAGVGPDLSHAG
Trigger: GCCCGCGTGGCTCAGGTCGGGCCCGACTCCCGCGTTCCCCCGGCAACCGGCCGGCTGTTCCCAATCAGGCGGGCCGCCAACCCGGAAAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS GCA 90 bp GGGAGTCGGGCCCGACCTGAGCCACGCGGGCTTGGTGCCCACCTGTaGGCGCCGCCTGCGAAGAAGGAACGGTCTGGGGAGAAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GSRARPEPRGLGAHL*APPAKKERSGEKAP
Trigger: CGGCGCCTTCTCCCCAGACCGTTCCTTCTTCGCAGGCGGCGCGCACAGGTGGGCACCAAGCCCGCGTGGCTCAGGTCGGGCCCGACTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS CCA 90 bp GCTCTCCGGACCCCCAGGGTCCTAGCGCGCGGCCCTTACCGAGCCTaGGCGCCCGGATTTCGGCAGCGGATCGCCTTTCCGGGTTGGCGG +
Preference number: 5 (lower is better)
Translates to: ALRTPRVLARGPYRA*APGFRQRIAFPGWR
Trigger: CCGCCAACCCGGAAAGGCGATCCGCTGCCGAAATCCGGGCGCCCAGGCTCGGTAAGGGCCGCGCGCTAGGACCCTGGGGGTCCGGAGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS CCA 90 bp GATTTCGGCAGCGGATCGCCTTTCCGGGTTGGCGGCCCGCCTGATTaGGAACAGCCGGCCGGTTGCCGGGGGAACGCGGGAGTCGGGCCC +
Preference number: 5 (lower is better)
Translates to: DFGSGSPFRVGGPPD*EQPAGCRGNAGVGP
Trigger: GGGCCCGACTCCCGCGTTCCCCCGGCAACCGGCCGGCTGTTCCCAATCAGGCGGGCCGCCAACCCGGAAAGGCGATCCGCTGCCGAAATC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS TCA 90 bp TCAGATTCTCAGCGGCGCTCTTCGCAATCTGAAAGTTGGGGCAGCTaGAGAGCCCCACCACCTTCACCTGCAGCGGCCGCTCCGGCAGCG +
Preference number: 5 (lower is better)
Translates to: SDSQRRSSQSESWGS*RAPPPSPAAAAPAA
Trigger: CGCTGCCGGAGCGGCCGCTGCAGGTGAAGGTGGTGGGGCTCTTCAGCTGCCCCAACTTTCAGATTGCGAAGAGCGCCGCTGAGAATCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440797.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CAA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGATCGCCTTTCCGGGTaGGCGGCCCGCCTGATTGGG +
Preference number: 5 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLDRLSG*AARLIG
Trigger: CCCAATCAGGCGGGCCGCCAACCCGGAAAGGCGATC...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CAA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTACTGAGCCACGCGGGCTaGGTGCCCACCTGTGCGCGC +
Preference number: 5 (lower is better)
Translates to: FLPEFVQLGNGRARILALLSHAG*VPTCAR
Trigger: GCGCGCACAGGTGGGCACCAAGCCCGCGTGGCTCAG...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CAA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTATCAACTTTGCGCCTGTaGCTGGGCCGCCGGCGCGCG +
Preference number: 5 (lower is better)
Translates to: FLPEFVQLGNGRARILALSTLRL*LGRRRA
Trigger: CGCGCGCCGGCGGCCCAGCAACAGGCGCAAAGTTGA...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CAA 90 bp CTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCGTCCAGAGTAGGTGGTaGCTGGTATTGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: LDEGEGAGPLAFYSCPTGVQSRW*LVLVPQ
Trigger: CTGCGGGACCAATACCAGCAACCACCTACTCTGGAC...GCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp GGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGTCCAGAGTAGGTGGTaGCTGGTATTGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: GRTTGVLFLSHWPEPSLMVQSRW*LVLVPQ
Trigger: CTGCGGGACCAATACCAGCAACCACCTACTCTGGAC...CATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCACTGGAAGGGGGTCTTaGAGGTGCTGGAAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPTGRGS*RCWKGS
Trigger: AGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGT...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp CAGAACCATCTCTCATGGCCACCCGTGGCTGCAAAGGAGTCTAGGAAATTGAGTGCCGAGATCACGCCATaGCACTCCAGCATGGGTGAC +
Preference number: 5 (lower is better)
Translates to: QNHLSWPPVAAKESRKLSAEITP*HSSMGD
Trigger: GTCACCCATGCTGGAGTGCAATGGCGTGATCTCGGC...ACTCAATTTCCTAGACTCCTTTGCAGCCACGGGTGGCCATGAGAGATGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447468.7
CDS-3UTR CAA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTGGAACAGCCGGCCGGTaGCCGGGGGAACGCGGGAGT +
Preference number: 5 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVGTAGR*PGERGS
Trigger: ACTCCCGCGTTCCCCCGGCAACCGGCCGGCTGTTCC...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CAA 90 bp GACTGGATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGGCACAGAAAAGTTCTaGCCTGAGTTTGTGCAGCTA +
Preference number: 5 (lower is better)
Translates to: DWMKGKGQDHWRSIPVPLGTEKF*PEFVQL
Trigger: TAGCTGCACAAACTCAGGCAAGAACTTTTCTGTGCC...CAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCATCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGACTCCGTCTTCAAATGTaGGACCATAAATCGACTCTC +
Preference number: 5 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARLRLQM*DHKSTL
Trigger: GAGAGTCGATTTATGGTCCAACATTTGAAGACGGAG...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447468.7
CDS-3UTR CAA 90 bp CAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCAAGGAGTCTAGGAAATaGAGTACCACCCTTTCACAG +
Preference number: 5 (lower is better)
Translates to: QDHWRSIPVPLARTISHGKESRK*STTLSQ
Trigger: CTGTGAAAGGGTGGTACTCAATTTCCTAGACTCCTT...GCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CAA 90 bp TTCTTGCCTGAGTTTGTGCAGCTAGGGAATGGCAGAGCCAGGATTCTGGCCCTACACTATATCCCCTCCTaGTATCCAGCCATTCTGTAC +
Preference number: 5 (lower is better)
Translates to: FLPEFVQLGNGRARILALHYIPS*YPAILY
Trigger: GTACAGAATGGCTGGATACAAGGAGGGGATATAGTG...TAGGGCCAGAATCCTGGCTCTGCCATTCCCTAGCTGCACAAACTCAGGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp ATGAAGGGGAAGGGGCAGGACCACTGGCGTTCTATTCCTGTCCCACTGGCCAGACCAGGTGATATGAGCTaGAGAACTTTAGATTACAGA +
Preference number: 5 (lower is better)
Translates to: MKGKGQDHWRSIPVPLARPGDMS*RTLDYR
Trigger: TCTGTAATCTAAAGTTCTCAAGCTCATATCACCTGG...TCTGGCCAGTGGGACAGGAATAGAACGCCAGTGGTCCTGCCCCTTCCCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCTCTCAGATGAAGGAATaGAGGCACAGAAAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPSQMKE*RHRKVL
Trigger: AAGAACTTTTCTGTGCCTCAATTCCTTCATCTGAGA...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCTCCCAGGTTTCATTTTaGAGTTCCTCAGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCSQVSF*SSSAAL
Trigger: GAGCGCCGCTGAGGAACTCAAAAATGAAACCTGGGA...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424445.6
CDS-3UTR CAA 90 bp CCACTGGCGTTCTATTCCTGTCCCACTGGCCAGAACCATCTCTCATGGCCACCCTTTCATCTTCAAATGTaGGACCATAAATCGACTCTC +
Preference number: 5 (lower is better)
Translates to: PLAFYSCPTGQNHLSWPPFHLQM*DHKSTL
Trigger: GAGAGTCGATTTATGGTCCAACATTTGAAGATGAAA...GGGTGGCCATGAGAGATGGTTCTGGCCAGTGGGACAGGAATAGAACGCCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAGAAGATGGGGAGGGATaGGGTGTAGATGAGGCAACC +
Preference number: 5 (lower is better)
Translates to: GYWKGVFEVLERFYIFSIEDGEG*GVDEAT
Trigger: GGTTGCCTCATCTACACCCAATCCCTCCCCATCTTC...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTAGCCTACGCCTACTTTaGGCAAGCCTCATATCCATT +
Preference number: 5 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTSLRLL*ASLISI
Trigger: AATGGATATGAGGCTTGCCAAAAGTAGGCGTAGGCT...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTGGCACAGAAAAGTTCTaGCCTGAGTTTGTGCAGCTA +
Preference number: 5 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTGTEKF*PEFVQL
Trigger: TAGCTGCACAAACTCAGGCAAGAACTTTTCTGTGCC...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTAGAAGATGGGGAGGGATaGGGTGTAGATGAGGCAACC +
Preference number: 5 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVEDGEG*GVDEAT
Trigger: GGTTGCCTCATCTACACCCAATCCCTCCCCATCTTC...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAAAGCCTACGCCTACTTTaGGCAAGCCTCATATCCATT +
Preference number: 5 (lower is better)
Translates to: QLPGLILYYRFVSVATGESLRLL*ASLISI
Trigger: AATGGATATGAGGCTTGCCAAAAGTAGGCGTAGGCT...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp GGGTACTGGAAGGGGGTCTTTGAGGTGCTGGAAAGGTTCTATATTTTCTCTATAACTGGAAGGGGGTCTTaGAGGTGCTGGAAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: GYWKGVFEVLERFYIFSITGRGS*RCWKGS
Trigger: AGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGT...TATAGAGAAAATATAGAACCTTTCCAGCACCTCAAAGACCCCCTTCCAGTACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp TCAGTTGCCCAAAAGCCACAAATTTTCTATCTAGATAAGGAGTTGCTTGCAGTGGAAGATGGGGAGGGATaGGGTGTAGATGAGGCAACC +
Preference number: 5 (lower is better)
Translates to: SVAQKPQIFYLDKELLAVEDGEG*GVDEAT
Trigger: GGTTGCCTCATCTACACCCAATCCCTCCCCATCTTC...CACTGCAAGCAACTCCTTATCTAGATAGAAAATTTGTGGCTTTTGGGCAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447468.7
CDS-3UTR CAA 90 bp ACTCTGCTGACTACATTACACCATGGGGACTGGAACCAGTTCCTTATGTCTTGCAAGGAGTCTAGGAAATaGAGTACCACCCTTTCACAG +
Preference number: 5 (lower is better)
Translates to: TLLTTLHHGDWNQFLMSCKESRK*STTLSQ
Trigger: CTGTGAAAGGGTGGTACTCAATTTCCTAGACTCCTT...GCAAGACATAAGGAACTGGTTCCAGTCCCCATGGTGTAATGTAGTCAGCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS GCA 90 bp GTCAACTATATCCCACACCTCGTGGGCCCATTTCTGCAGATCCAATaGATCACCCAGAAACTGACCATTAACAAAAGAAATCACAGAGGA +
Preference number: 5 (lower is better)
Translates to: VNYIPHLVGPFLQIQ*ITQKLTINKRNHRG
Trigger: TCCTCTGTGATTTCTTTTGTTAATGGTCAGTTTCTGGGTGATGCATTGGATCTGCAGAAATGGGCCCACGAGGTGTGGGATATAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417394.6
ENST00000424445.6
ENST00000440797.6
ENST00000447468.7
ENST00000518648.1
ENST00000520723.5
ENST00000521072.7
CDS CCA 90 bp GTATCCTGGATAATTTTGATGCCATTCCCAACAGTTCCATCTGCATaGGAGCCTGTCCTTCAAATGTTGGACCATAAATCGACTCTCCAT +
Preference number: 5 (lower is better)
Translates to: VSWIILMPFPTVPSA*EPVLQMLDHKSTLH
Trigger: ATGGAGAGTCGATTTATGGTCCAACATTTGAAGGACAGGCTCCCATGCAGATGGAACTGTTGGGAATGGCATCAAAATTATCCAGGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524031.1
CDS-3UTR CAA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTAACACGAAATCATGCTaGGTGTCTCTTAAGAACTTA +
Preference number: 5 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTNTKSC*VSLKNL
Trigger: TAAGTTCTTAAGAGACACCAAGCATGATTTCGTGTT...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424445.6
ENST00000447468.7
ENST00000521072.7
CDS-3UTR CAA 90 bp TCTTTATGGCCACAAGATGACAGCTGTAGCTCCAGCCTCTCCACATTCCAGACTCTGCATCATTCCTATTaGGTTACTTACCAAGTTTCT +
Preference number: 5 (lower is better)
Translates to: SLWPQDDSCSSSLSTFQTLHHSY*VTYQVS
Trigger: AGAAACTTGGTAAGTAACCAAATAGGAATGATGCAG...AGTCTGGAATGTGGAGAGGCTGGAGCTACAGCTGTCATCTTGTGGCCATAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAACCAGGTGATATGAGCTaGAGAACTTTAGATTACAGA +
Preference number: 5 (lower is better)
Translates to: QLPGLILYYRFVSVATGEPGDMS*RTLDYR
Trigger: TCTGTAATCTAAAGTTCTCAAGCTCATATCACCTGG...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp CAGCTGCCTGGTTTGATATTGTACTACCGTTTTGTAAGCGTAGCCACTGGGGAAAACACGAAATCATGCTaGGTGTCTCTTAAGAACTTA +
Preference number: 5 (lower is better)
Translates to: QLPGLILYYRFVSVATGENTKSC*VSLKNL
Trigger: TAAGTTCTTAAGAGACACCAAGCATGATTTCGTGTT...TTCCCCAGTGGCTACGCTTACAAAACGGTAGTACAATATCAAACCAGGCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTAAGGAGTCTAGGAAATaGAGTACCACCCTTTCACAG +
Preference number: 5 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVKESRK*STTLSQ
Trigger: CTGTGAAAGGGTGGTACTCAATTTCCTAGACTCCTT...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp GCCCTAGAACACACATTCTTAACACTATGTTGCTCTGGGTCAGTTGAGAATGTATTTCATCTTCAAATGTaGGACCATAAATCGACTCTC +
Preference number: 5 (lower is better)
Translates to: ALEHTFLTLCCSGSVENVFHLQM*DHKSTL
Trigger: GAGAGTCGATTTATGGTCCAACATTTGAAGATGAAA...TACATTCTCAACTGACCCAGAGCAACATAGTGTTAAGAATGTGTGTTCTAGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTTCTCAGATGAAGGAATaGAGGCACAGAAAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVSQMKE*RHRKVL
Trigger: AAGAACTTTTCTGTGCCTCAATTCCTTCATCTGAGA...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTAACACGAAATCATGCTaGGTGTCTCTTAAGAACTTA +
Preference number: 5 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVNTKSC*VSLKNL
Trigger: TAAGTTCTTAAGAGACACCAAGCATGATTTCGTGTT...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS-3UTR CAA 90 bp ATACTCATGATAAAATGGCATCACACACATTGTACCAATGTCAGCTGCCTGGTTCTGCATCATTCCTATTaGGTTACTTACCAAGTTTCT +
Preference number: 5 (lower is better)
Translates to: ILMIKWHHTHCTNVSCLVLHHSY*VTYQVS
Trigger: AGAAACTTGGTAAGTAACCAAATAGGAATGATGCAG...AACCAGGCAGCTGACATTGGTACAATGTGTGTGATGCCATTTTATCATGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000521072.7
CDS CAA 90 bp GGGCGGGTCGAGGGCGGCCCGTGGCGGCTGGGCCTTTCCTCAACTTaGCGCCTGTTGCTGGGCCGCCGGCGCGCGGGCGGCCGCGACCGC +
Preference number: 6 (lower is better)
Translates to: GRVEGGPWRLGLSST*RLLLGRRRAGGRDR
Trigger: GCGGTCGCGGCCGCCCGCGCGCCGGCGGCCCAGCAACAGGCGCAAAGTTGAGGAAAGGCCCAGCCGCCACGGGCCGCCCTCGACCCGCCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS TCA 72 bp CCGGTTGCCGGGGGAACGCGGGAGTCGGGCCCGACCTaGGCCACGCGGGCTTGGTGCCCACCTGTGCGCGCC +
Preference number: 6 (lower is better)
Translates to: PVAGGTRESGPT*ATRAWCPPVRA
Trigger: GGCGCGCACAGGTGGGCACCAAGCCCGCGTGGCTCAGGTCGGGCCCGACTCCCGCGTTCCCCCGGCAACCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS GCA 72 bp AGGGCGGCCCGTGGCGGCTGGGCCTTTCCTCAACTTTaGGCCTGTTGCTGGGCCGCCGGCGCGCGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RAARGGWAFPQL*ACCWAAGARAA
Trigger: GGCCGCCCGCGCGCCGGCGGCCCAGCAACAGGCGCAAAGTTGAGGAAAGGCCCAGCCGCCACGGGCCGCCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS CAA 72 bp GAGGGCGGCCCGTGGCGGCTGGGCCTTTCCTCAACTTaGCGCCTGTTGCTGGGCCGCCGGCGCGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: EGGPWRLGLSST*RLLLGRRRAGG
Trigger: GCCGCCCGCGCGCCGGCGGCCCAGCAACAGGCGCAAAGTTGAGGAAAGGCCCAGCCGCCACGGGCCGCCCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS TCA 72 bp TGCGGCCTTGCCATGGCCGCGCCCGGGGACGCCCGGTaGCCCCAAACACTGCGCGTCGCTCCGGCAACCGCG +
Preference number: 6 (lower is better)
Translates to: CGLAMAAPGDAR*PQTLRVAPATA
Trigger: CGCGGTTGCCGGAGCGACGCGCAGTGTTTGGGGTCACCGGGCGTCCCCGGGCGCGGCCATGGCAAGGCCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS CCA 72 bp CCACCTGTGCGCGCCGCCTGCGAAGAAGGAACGGTCTaGGGAGAAGGCGCCGCCGGCCGCCCCCGTCCCCAC +
Preference number: 6 (lower is better)
Translates to: PPVRAACEEGTV*GEGAAGRPRPH
Trigger: GTGGGGACGGGGGCGGCCGGCGGCGCCTTCTCCCCAGACCGTTCCTTCTTCGCAGGCGGCGCGCACAGGTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS GCA 72 bp GTTGGCGGCCCGCCTGATTGGGAACAGCCGGCCGGTTaGCGGGGGAACGCGGGAGTCGGGCCCGACCTGAGC +
Preference number: 6 (lower is better)
Translates to: VGGPPDWEQPAG*RGNAGVGPDLS
Trigger: GCTCAGGTCGGGCCCGACTCCCGCGTTCCCCCGGCAACCGGCCGGCTGTTCCCAATCAGGCGGGCCGCCAAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS CAA 72 bp AACGCGGGAGTCGGGCCCGACCTGAGCCACGCGGGCTaGGTGCCCACCTGTGCGCGCCGCCTGCGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: NAGVGPDLSHAG*VPTCARRLRRR
Trigger: CCTTCTTCGCAGGCGGCGCGCACAGGTGGGCACCAAGCCCGCGTGGCTCAGGTCGGGCCCGACTCCCGCGTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS CAA 90 bp CCGAGCCTGGGCGCCCGGATTTCGGCAGCGGATCGCCTTTCCGGGTaGGCGGCCCGCCTGATTGGGAACAGCCGGCCGGTTGCCGGGGGA +
Preference number: 6 (lower is better)
Translates to: PSLGARISAADRLSG*AARLIGNSRPVAGG
Trigger: TCCCCCGGCAACCGGCCGGCTGTTCCCAATCAGGCGGGCCGCCAACCCGGAAAGGCGATCCGCTGCCGAAATCCGGGCGCCCAGGCTCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS GCA 72 bp GCCCGACCTGAGCCACGCGGGCTTGGTGCCCACCTGTaGGCGCCGCCTGCGAAGAAGGAACGGTCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: ARPEPRGLGAHL*APPAKKERSGE
Trigger: CTCCCCAGACCGTTCCTTCTTCGCAGGCGGCGCGCACAGGTGGGCACCAAGCCCGCGTGGCTCAGGTCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS CCA 72 bp AGCGGATCGCCTTTCCGGGTTGGCGGCCCGCCTGATTaGGAACAGCCGGCCGGTTGCCGGGGGAACGCGGGA +
Preference number: 6 (lower is better)
Translates to: SGSPFRVGGPPD*EQPAGCRGNAG
Trigger: TCCCGCGTTCCCCCGGCAACCGGCCGGCTGTTCCCAATCAGGCGGGCCGCCAACCCGGAAAGGCGATCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS CCA 72 bp ACCCCCAGGGTCCTAGCGCGCGGCCCTTACCGAGCCTaGGCGCCCGGATTTCGGCAGCGGATCGCCTTTCCG +
Preference number: 6 (lower is better)
Translates to: TPRVLARGPYRA*APGFRQRIAFP
Trigger: CGGAAAGGCGATCCGCTGCCGAAATCCGGGCGCCCAGGCTCGGTAAGGGCCGCGCGCTAGGACCCTGGGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS GCA 72 bp AAGTTGGGGCAGCTGAAGAGCCCCACCACCTTCACCTaGAGCGGCCGCTCCGGCAGCGACGGCGAGCCGCAC +
Preference number: 6 (lower is better)
Translates to: KLGQLKSPTTFT*SGRSGSDGEPH
Trigger: GTGCGGCTCGCCGTCGCTGCCGGAGCGGCCGCTGCAGGTGAAGGTGGTGGGGCTCTTCAGCTGCCCCAACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417394.6
ENST00000424445.6
ENST00000440797.6
ENST00000447468.7
ENST00000521072.7
CDS CAA 72 bp GGCGCCCGGATTTCGGCAGCGGATCGCCTTTCCGGGTaGGCGGCCCGCCTGATTGGGAACAGCCGGCCGGTT +
Preference number: 6 (lower is better)
Translates to: GARISAADRLSG*AARLIGNSRPV
Trigger: AACCGGCCGGCTGTTCCCAATCAGGCGGGCCGCCAACCCGGAAAGGCGATCCGCTGCCGAAATCCGGGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424445.6
ENST00000440797.6
CDS TCA 72 bp CAGCGGCGCTCTTCGCAATCTGAAAGTTGGGGCAGCTaGAGAGCCCCACCACCTTCACCTGCAGCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: QRRSSQSESWGS*RAPPPSPAAAA
Trigger: AGCGGCCGCTGCAGGTGAAGGTGGTGGGGCTCTTCAGCTGCCCCAACTTTCAGATTGCGAAGAGCGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417394.6
ENST00000424445.6
ENST00000440797.6
ENST00000447468.7
ENST00000521072.7
CDS TCA 72 bp TTATTCTTCAGATTCTCAGCGGCGCTCTTCGCAATCTaGAAGTTGGGGCAGCTGAAGAGCCCCACCACCTTC +
Preference number: 6 (lower is better)
Translates to: LFFRFSAALFAI*KLGQLKSPTTF
Trigger: GAAGGTGGTGGGGCTCTTCAGCTGCCCCAACTTTCAGATTGCGAAGAGCGCCGCTGAGAATCTGAAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440797.6
ENST00000447468.7
ENST00000521072.7
CDS CCA 72 bp GCAGAGGGTTTAATGTCAACTATATCCCACACCTCGTaGGCCCATTTCTGCAGATCCAATGCATCACCCAGA +
Preference number: 6 (lower is better)
Translates to: AEGLMSTISHTS*AHFCRSNASPR
Trigger: TCTGGGTGATGCATTGGATCTGCAGAAATGGGCCCACGAGGTGTGGGATATAGTTGACATTAAACCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000417394.6
ENST00000424445.6
ENST00000440797.6
ENST00000447468.7
ENST00000518648.1
ENST00000520723.5
ENST00000521072.7
ENST00000524031.1
CDS CAA 90 bp CCATTCCCAACAGTTCCATCTGCATGGGAGCCTGTCCTTCAAATGTaGGACCATAAATCGACTCTCCATTATCTCCTTTTCCATACACTA +
Preference number: 6 (lower is better)
Translates to: PFPTVPSAWEPVLQM*DHKSTLHYLLFHTL
Trigger: TAGTGTATGGAAAAGGAGATAATGGAGAGTCGATTTATGGTCCAACATTTGAAGGACAGGCTCCCATGCAGATGGAACTGTTGGGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524031.1
CDS GCA 72 bp CTTAGCGGAAAAATCCTCAGTGAGTGCGTCATAAAGTaGAGAGGGTTTAATGTCAACTATATCCCACACCTC +
Preference number: 6 (lower is better)
Translates to: LSGKILSECVIK*RGFNVNYIPHL
Trigger: GAGGTGTGGGATATAGTTGACATTAAACCCTCTGCACTTTATGACGCACTCACTGAGGATTTTTCCGCTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000417394.6
ENST00000424445.6
ENST00000440797.6
ENST00000447468.7
ENST00000518648.1
ENST00000520723.5
ENST00000521072.7
ENST00000524031.1
CDS CCA 72 bp TCCTATTCCCTCTTTGTCATGATTGTCCCTGTATCCTaGATAATTTTGATGCCATTCCCAACAGTTCCATCT +
Preference number: 6 (lower is better)
Translates to: SYSLFVMIVPVS*IILMPFPTVPS
Trigger: AGATGGAACTGTTGGGAATGGCATCAAAATTATCCAGGATACAGGGACAATCATGACAAAGAGGGAATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524031.1
CDS TCA 72 bp AGAGGAACTAATATAGGATCTTCAAATTTGGATGGATaGTTATTCTTCAGATTCTCAGCGGCGCTCTTCGCA +
Preference number: 6 (lower is better)
Translates to: RGTNIGSSNLDG*LFFRFSAALFA
Trigger: TGCGAAGAGCGCCGCTGAGAATCTGAAGAATAATCATCCATCCAAATTTGAAGATCCTATATTAGTTCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440797.6
ENST00000447468.7
ENST00000521072.7