RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPIH (Homo sapiens)

Ensembl gene IDs: ENSG00000171960

Ensembl transcript IDs: ENST00000372549.1, ENST00000372550.6, ENST00000436387.1, ENST00000440068.6, ENST00000676675.1, ENST00000677219.1, ENST00000677307.1, ENST00000677312.1, ENST00000677356.1, ENST00000677900.1, ENST00000677926.1, ENST00000678038.1, ENST00000678076.1, ENST00000678193.1, ENST00000678308.1, ENST00000678333.1, ENST00000678803.1, ENST00000679245.1

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTCCTGGCTGCCTGGCCTGGTCCCAGCAGAGAGTTACTCAGGCCTaGAGCCAGGTCTTTCTAGGGGGACTACTGAATGGAACTGTAGTC +
Preference number: 1 (lower is better)
Translates to: SPGCLAWSQQRVTQA*SQVFLGGLLNGTVV
Trigger: GACTACAGTTCCATTCAGTAGTCCCCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCTCTGCTGGGACCAGGCCAGGCAGCCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CCA 90 bp AATTGCAGTATCAGTTCTGATGAGAGGCATGACAGGTGTGTCTCCTaGCTGCCTGGCCTGGTCCCAGCAGAGAGTTACTCAGGCCTGGAG +
Preference number: 1 (lower is better)
Translates to: NCSISSDERHDRCVS*LPGLVPAESYSGLE
Trigger: CTCCAGGCCTGAGTAACTCTCTGCTGGGACCAGGCCAGGCAGCCAGGAGACACACCTGTCATGCCTCTCATCAGAACTGATACTGCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR GCA 90 bp CATGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTaGAGGCACAGACTGAAGTTTAACTGTGGGCCCTCAAGCAAAGTG +
Preference number: 1 (lower is better)
Translates to: HATPCSSGQWVLASY*RHRLKFNCGPSSKV
Trigger: CACTTTGCTTGAGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR CCA 90 bp GCTGCAATGCAAGCAGCTTTGCCTTTGTACTGGACTGGAATGGACTaGAGCCAGACATTCTCTCCACTCCTGGCCTTTTCAGCTGGCAGA +
Preference number: 1 (lower is better)
Translates to: AAMQAALPLYWTGMD*SQTFSPLLAFSAGR
Trigger: TCTGCCAGCTGAAAAGGCCAGGAGTGGAGAGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR GCA 90 bp ACACCCAGATACTATTGTCCCCCTCCTCTTGCCATTCCTCAAACATaGCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTG +
Preference number: 1 (lower is better)
Translates to: TPRYYCPPPLAIPQT*HTLLQWTMGTGIVL
Trigger: CAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTGAGGAATGGCAAGAGGAGGGGGACAATAGTATCTGGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR CCA 90 bp ACTTGGCTGCAATGCAAGCAGCTTTGCCTTTGTACTGGACTGGAATaGACTGGAGCCAGACATTCTCTCCACTCCTGGCCTTTTCAGCTG +
Preference number: 1 (lower is better)
Translates to: TWLQCKQLCLCTGLE*TGARHSLHSWPFQL
Trigger: CAGCTGAAAAGGCCAGGAGTGGAGAGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGCAGCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR GCA 90 bp GCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTaGAGTATCAGTTCTGATGAGAGGCATGACAGGTGTGTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: AFTYEASEYEVEAWN*SISSDERHDRCVSW
Trigger: CCAGGAGACACACCTGTCATGCCTCTCATCAGAACTGATACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CCA 90 bp TGTACTGGACTGGAATGGACTGGAGCCAGACATTCTCTCCACTCCTaGCCTTTTCAGCTGGCAGAGCTTCTGATTCAGTCTTTGTCTGGA +
Preference number: 1 (lower is better)
Translates to: CTGLEWTGARHSLHS*PFQLAELLIQSLSG
Trigger: TCCAGACAAAGACTGAATCAGAAGCTCTGCCAGCTGAAAAGGCCAGGAGTGGAGAGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR CCA 90 bp GTAAGACTTGGCTGCAATGCAAGCAGCTTTGCCTTTGTACTGGACTaGAATGGACTGGAGCCAGACATTCTCTCCACTCCTGGCCTTTTC +
Preference number: 1 (lower is better)
Translates to: VRLGCNASSFAFVLD*NGLEPDILSTPGLF
Trigger: GAAAAGGCCAGGAGTGGAGAGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGCAGCCAAGTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR GCA 90 bp TGGAACCTCTACGTGTGTAAGACTTGGCTGCAATGCAAGCAGCTTTaGCTTTGTACTGGACTGGAATGGACTGGAGCCAGACATTCTCTC +
Preference number: 1 (lower is better)
Translates to: WNLYVCKTWLQCKQL*LCTGLEWTGARHSL
Trigger: GAGAGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGCAGCCAAGTCTTACACACGTAGAGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR GCA 90 bp AGAGAACAGAGTAAGTACACCCAGATACTATTGTCCCCCTCCTCTTaGCATTCCTCAAACATGCCACACCTTGCTCCAGTGGACAATGGG +
Preference number: 1 (lower is better)
Translates to: REQSKYTQILLSPSS*HSSNMPHLAPVDNG
Trigger: CCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTGAGGAATGGCAAGAGGAGGGGGACAATAGTATCTGGGTGTACTTACTCTGTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR CCA 90 bp TGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTaGAATTGCAGTATCAGTTCTGATGAGAGGCATGACAGGTGTGTC +
Preference number: 1 (lower is better)
Translates to: CKAFTYEASEYEVEA*NCSISSDERHDRCV
Trigger: GACACACCTGTCATGCCTCTCATCAGAACTGATACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CCA 90 bp CTCTTGCCATTCCTCAAACATGCCACACCTTGCTCCAGTGGACAATaGGTACTGGCATCGTACTGCAGGCACAGACTGAAGTTTAACTGT +
Preference number: 1 (lower is better)
Translates to: LLPFLKHATPCSSGQ*VLASYCRHRLKFNC
Trigger: ACAGTTAAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTGAGGAATGGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR CCA 90 bp GCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTCGAGCAAGCTGATTCAGTCTTTGTC +
Preference number: 1 (lower is better)
Translates to: AGFGPRGKEKGKSTL*VYGLEVEQADSVFV
Trigger: GACAAAGACTGAATCAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677900.1
3UTR CCA 90 bp GCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTAAGAGAACAG +
Preference number: 1 (lower is better)
Translates to: AGFGPRGKEKGKSTL*VYGLEVEQAILREQ
Trigger: CTGTTCTCTTAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR CCA 90 bp GCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTGATTCAGTCT +
Preference number: 1 (lower is better)
Translates to: AGFGPRGKEKGKSTL*VYGLEVEQAILIQS
Trigger: AGACTGAATCAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678333.1
3UTR TCA 90 bp GCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACAGACTaGAGTTTAACTGTGGGCCCTCAAGCAAAGTGTATGAAAATGTAT +
Preference number: 1 (lower is better)
Translates to: APVDNGYWHRTAGTD*SLTVGPQAKCMKMY
Trigger: ATACATTTTCATACACTTTGCTTGAGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR GCA 90 bp TATTCCACTGAAGAGAATGGAACCTCTACGTGTGTAAGACTTGGCTaGAATGCAAGCAGCTTTGCCTTTGTACTGGACTGGAATGGACTG +
Preference number: 1 (lower is better)
Translates to: YSTEENGTSTCVRLG*NASSFAFVLDWNGL
Trigger: CAGTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGCAGCCAAGTCTTACACACGTAGAGGTTCCATTCTCTTCAGTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR TCA 90 bp TTACTAGTGATCACCTCTGGGAATGTCTTACTTTCCATGAGCTCCTaGAAGGAGACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTA +
Preference number: 1 (lower is better)
Translates to: LLVITSGNVLLSMSS*KETSFNSLSPSLQL
Trigger: TAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTCTCCTTTCAGGAGCTCATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR GCA 90 bp CCTAAGCTCTGTCATACCAGGCACTATGTTAGTCAGCATGATCCTTaGTTCAACAAGTTCTCAGTCCAGAGAAAAACAGACTTACATATT +
Preference number: 1 (lower is better)
Translates to: PKLCHTRHYVSQHDP*FNKFSVQRKTDLHI
Trigger: AATATGTAAGTCTGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTATGACAGAGCTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR CCA 90 bp CTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTaGGAATGTCTTACTTTCCATGAGCTCCTGATTCAGTCTTTGTCT +
Preference number: 1 (lower is better)
Translates to: LLILGNVTHITSDHL*ECLTFHELLIQSLS
Trigger: AGACAAAGACTGAATCAGGAGCTCATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677219.1
ENST00000678038.1
3UTR CCA 90 bp CTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTaGGAATGTCTTACTTTCCATGAGCTCCTGAAAGGAGACATCTTT +
Preference number: 1 (lower is better)
Translates to: LLILGNVTHITSDHL*ECLTFHELLKGDIF
Trigger: AAAGATGTCTCCTTTCAGGAGCTCATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR GCA 90 bp AAGTCTCTTTGCTATCTCTACTCTGCAGAAGTATTATCCACAGTCTaGTATATATCACTGCAGAGATTCCTGAAAGTCATTCAAAATAAA +
Preference number: 1 (lower is better)
Translates to: KSLCYLYSAEVLSTV*YISLQRFLKVIQNK
Trigger: TTTATTTTGAATGACTTTCAGGAATCTCTGCAGTGATATATAGCAGACTGTGGATAATACTTCTGCAGAGTAGAGATAGCAAAGAGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR-3UTR CCA 90 bp CTGGAAGATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTTGTCTCCTGGCTGCCTaGCCTGGTCCCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LEDARHSPMRPANMKSRPCLLAA*PGPSRE
Trigger: CTCTCTGCTGGGACCAGGCCAGGCAGCCAGGAGACA...AGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp AAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTGCAGTTGTCTCCTGGCTGCCTaGCCTGGTCCCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: KAFTYEASEYEVEAWNCSCLLAA*PGPSRE
Trigger: CTCTCTGCTGGGACCAGGCCAGGCAGCCAGGAGACA...ACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp TCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCGAGAGGCAATGGAAATaGGTGAGGAGGCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: SFNSLSPSLQLACCPAQSERQWK*VRRQEG
Trigger: CCCTTCTTGCCTCCTCACCCATTTCCATTGCCTCTC...GCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp TCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCAGAGTTACTCAGGCCTaGAGCCAGGTCTTTCTAGGG +
Preference number: 2 (lower is better)
Translates to: SFNSLSPSLQLACCPAQSRVTQA*SQVFLG
Trigger: CCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCT...GCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp TGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGCCACAGTGGAGAGATaGACCAAGTGCTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: WRSRTKSNPSSLQVSVPEATVER*TKCCGS
Trigger: GCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGC...CTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR GCA 90 bp TTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCAGGGTCGAGGCCTGGAATTaGAGTATCAGTTCTGATGAG +
Preference number: 2 (lower is better)
Translates to: FNSLSPSLQLACCPAQSRVEAWN*SISSDE
Trigger: CTCATCAGAACTGATACTGCAATTCCAGGCCTCGAC...CCTGCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR GCA 90 bp TCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGGTAAGCTGCATGGTGTaGCAGGACCTAAGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: SLQVSVPEVKRKGSPHSGVSCMV*QDLSSV
Trigger: GACAGAGCTTAGGTCCTGGCACACCATGCAGCTTAC...CCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CCA 90 bp ACCGTGCCCGGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAGCCTTTGTACTGGACTaGAATGGACTGGAGCCAGAC +
Preference number: 2 (lower is better)
Translates to: TVPGHSQLFSTLLILFSQAFVLD*NGLEPD
Trigger: GTCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGC...TTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCCGGGCACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR-3UTR TCA 90 bp GGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAAAGGGTAGAGCCACAGTGGAGAGATaGACCAAGTGCTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GHSQLFSTLLILFSQKGRATVER*TKCCGS
Trigger: GCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGC...TCTACCCTTTTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
3UTR-3UTR CCA 90 bp GCTCAGAGAAGGAAAGTGACTACTCCAAGGCCATACACGGAGGAACTGGGCTCATCACTACCCCTCACCTaGCTGGAAGTGATGGATTTC +
Preference number: 2 (lower is better)
Translates to: AQRRKVTTPRPYTEELGSSLPLT*LEVMDF
Trigger: GAAATCCATCACTTCCAGCCAGGTGAGGGGTAGTGA...TGAGCCCAGTTCCTCCGTGTATGGCCTTGGAGTAGTCACTTTCCTTCTCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp TCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCATTACGGGTAAGAAATaGGTCCATGTAGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: SFNSLSPSLQLACCPAQSITGKK*VHVGWK
Trigger: CTTCCAGCCTACATGGACTCATTTCTTACCCGTAAT...GCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp GGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAAAGGGTAGACTGTGGGCAGGCTCCTaGGAAGTGCTGATTCAGTCT +
Preference number: 2 (lower is better)
Translates to: GHSQLFSTLLILFSQKGRLWAGS*EVLIQS
Trigger: AGACTGAATCAGCACTTCCCAGGAGCCTGCCCACAG...TCTACCCTTTTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676675.1
3UTR-3UTR CCA 90 bp AAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTGCAGTGAGAGGCAATGGAAATaGGTGAGGAGGCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: KAFTYEASEYEVEAWNCSERQWK*VRRQEG
Trigger: CCCTTCTTGCCTCCTCACCCATTTCCATTGCCTCTC...ACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp AAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTGCAGTAGAGTTACTCAGGCCTaGAGCCAGGTCTTTCTAGGG +
Preference number: 2 (lower is better)
Translates to: KAFTYEASEYEVEAWNCSRVTQA*SQVFLG
Trigger: CCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCT...ACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp TTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCAGGTATGAAGTCGAGGCCTaGAATTGCAGTATCAGTTCT +
Preference number: 2 (lower is better)
Translates to: FNSLSPSLQLACCPAQSRYEVEA*NCSISS
Trigger: AGAACTGATACTGCAATTCCAGGCCTCGACTTCATA...CCTGCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CAA 90 bp GATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTaGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACAC +
Preference number: 2 (lower is better)
Translates to: DGSLWRSRTKSNPSS*QVSVPEVKRKGSPH
Trigger: GTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
3UTR-3UTR TCA 90 bp GAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAGCTGGCAGAGCTTCTaGTTCAGTCTTTGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: EVKRKGSPHSGFMALKSSSWQSF*FSLCLD
Trigger: GTCCAGACAAAGACTGAATCAGAAGCTCTGCCAGCT...GCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR-3UTR GCA 90 bp CGTGCCCGGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAAATGTGTAAGACTTGGCTaGAATGCAAGCAGCTTTGCC +
Preference number: 2 (lower is better)
Translates to: RARPLPAILYTPNPLFPKCVRLG*NASSFA
Trigger: GGCAAAGCTGCTTGCATTGCAGCCAAGTCTTACACA...TTTTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCCGGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR-3UTR CCA 90 bp ATTCTCACCATAGGTCAGACCTTTAGGTCCCCAGAGCAAAGTTGGGCAGTAAATATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: ILTIGQTFRSPEQSWAVNMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...ATTTACTGCCCAACTTTGCTCTGGGGACCTAAAGGTCTGACCTATGGTGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
3UTR-3UTR CCA 90 bp TTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTGTGGGCAGGCTCCTaGGAAGTGCTGGGAGGATTT +
Preference number: 2 (lower is better)
Translates to: FCQTLMALCGGPEQKAILLWAGS*EVLGGF
Trigger: AAATCCTCCCAGCACTTCCCAGGAGCCTGCCCACAG...AAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR-3UTR TCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGACTGGGATTACAGGAGTaGGCCACCTCCTGCCGGGCT +
Preference number: 2 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRLGLQE*ATSCRA
Trigger: AGCCCGGCAGGAGGTGGCTCACTCCTGTAATCCCAG...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp GCTCAGAGAAGGAAAGTGACTACTCCAAGGCCATACACGGAGGAACTGGGCTCAAATGGAACTGTAGTCTaGGAGTGCTGTTACAAACTG +
Preference number: 2 (lower is better)
Translates to: AQRRKVTTPRPYTEELGSNGTVV*ECCYKL
Trigger: CAGTTTGTAACAGCACTCTCAGACTACAGTTCCATT...TGAGCCCAGTTCCTCCGTGTATGGCCTTGGAGTAGTCACTTTCCTTCTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp ATACCAGGCACTATGTTAGTCAGCATGATCCTTGCTTCAACAAGTTCTCAGTCCATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: IPGTMLVSMILASTSSQSMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...GGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CCA 90 bp GATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTAGGGGGACTACTGAATaGAACTGTAGTCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: DARHSPMRPANMKSRPGIRGTTE*NCSLRV
Trigger: CACTCTCAGACTACAGTTCCATTCAGTAGTCCCCCT...AATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGACCACTGTTCGCCATaGAAAGCAGGCCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKDHCSP*KAGLEL
Trigger: CAGCTCCAGGCCTGCTTTCCATGGCGAACAGTGGTC...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677926.1
ENST00000678076.1
3UTR-3UTR CCA 90 bp GGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAACCTGGAAGAGGAGGTaGAGGGATCAGCAATGGATT +
Preference number: 2 (lower is better)
Translates to: GKEKGKSTLWVYGLEVEQTWKRR*RDQQWI
Trigger: AATCCATTGCTGATCCCTCCACCTCCTCTTCCAGGT...TTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000678193.1
3UTR-3UTR CCA 90 bp CCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCGTGGACAATGGGTACTaGCATCGTACTGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: PFCQTLMALCGGPEQKAIVDNGY*HRTAGT
Trigger: TGTGCCTGCAGTACGATGCCAGTACCCATTGTCCAC...GATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR GCA 90 bp CATGGCTTGACTGAAGTCACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTGCAATCCTTCTTCCTTaGAGGTTTCGGTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: HGLTEVTELDSDETSWSTAILLP*RFRSQR
Trigger: CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGC...AGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGTGACTTCAGTCAAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
3UTR-3UTR TCA 90 bp CTGGAAGATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTTTTCCATTTGACAGATaGGGAAATGTGCTCAGAGAA +
Preference number: 2 (lower is better)
Translates to: LEDARHSPMRPANMKSRPFPFDR*GNVLRE
Trigger: TTCTCTGAGCACATTTCCTCATCTGTCAAATGGAAA...AGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp GGAGACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCTACAGTATTTCCATTTaGCAGATGAGGAAATGTGCT +
Preference number: 2 (lower is better)
Translates to: GDIFQFFVPLSAASMLPSYSISI*QMRKCA
Trigger: AGCACATTTCCTCATCTGTCAAATGGAAATACTGTA...GCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp CAGAGAGTTACTCAGGCCTGGAGCCAGGTCTTTCTAGGGGGACTACTGAATGGATACAGTATTTCCATTTaGCAGATGAGGAAATGTGCT +
Preference number: 2 (lower is better)
Translates to: QRVTQAWSQVFLGGLLNGYSISI*QMRKCA
Trigger: AGCACATTTCCTCATCTGTCAAATGGAAATACTGTA...TCCATTCAGTAGTCCCCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR GCA 90 bp AGGAACTGGAAGGGGACATCCCATATGAGACAATGCTCCCAGCTATTCTCTTTTGTACTGGCATCGTACTaGAGGCACAGACTGAAGTTT +
Preference number: 2 (lower is better)
Translates to: RNWKGTSHMRQCSQLFSFVLASY*RHRLKF
Trigger: AAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTAC...AAAAGAGAATAGCTGGGAGCATTGTCTCATATGGGATGTCCCCTTCCAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
3UTR-3UTR TCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGACTGGTCTCGAACTCCTaGGCTCAAGCTATCTGCCCT +
Preference number: 2 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRLVSNS*AQAICP
Trigger: AGGGCAGATAGCTTGAGCTCAGGAGTTCGAGACCAG...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp GATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 2 (lower is better)
Translates to: DARHSPMRPANMKSRPGITSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...AATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp GGAGACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCTACTCTTCTCATACTTaGCAATGTCACTCATATTAC +
Preference number: 2 (lower is better)
Translates to: GDIFQFFVPLSAASMLPSYSSHT*QCHSYY
Trigger: GTAATATGAGTGACATTGCCAAGTATGAGAAGAGTA...GCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp AGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCTTTCCACTAGACCATCACTACCCCTCACCTaGCTGGAAGTGATGGATTTC +
Preference number: 2 (lower is better)
Translates to: RNWAQSHVFKTKVLSTRPSLPLT*LEVMDF
Trigger: GAAATCCATCACTTCCAGCCAGGTGAGGGGTAGTGA...TGGTCTAGTGGAAAGAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp CTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACGAGAGGCAATGGAAATaGGTGAGGAGGCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: LPCTLLILGNVTHITSDHERQWK*VRRQEG
Trigger: CCCTTCTTGCCTCCTCACCCATTTCCATTGCCTCTC...GTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp TATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATAGCCACAGTGGAGAGATaGACCAAGTGCTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: YGQAYYLIYLPFTTPCIIATVER*TKCCGS
Trigger: GCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGC...TATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR TCA 90 bp AAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTGCAGTCTGTTACAAACTGCCTaGGTAGTTTTCACATTGATA +
Preference number: 2 (lower is better)
Translates to: KAFTYEASEYEVEAWNCSLLQTA*VVFTLI
Trigger: TATCAATGTGAAAACTACTCAGGCAGTTTGTAACAG...ACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp CTGGAAGATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTTACTCTTCTCATACTTaGCAATGTCACTCATATTAC +
Preference number: 2 (lower is better)
Translates to: LEDARHSPMRPANMKSRPYSSHT*QCHSYY
Trigger: GTAATATGAGTGACATTGCCAAGTATGAGAAGAGTA...AGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATCTTCCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAATTACGGGTAAGAAATaGGTCCATGTAGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKITGKK*VHVGWK
Trigger: CTTCCAGCCTACATGGACTCATTTCTTACCCGTAAT...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp TGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATAATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: WSSILSHLFALHNSMHYIMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...TATATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CCA 90 bp GGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATATATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: GQAYYLIYLPFTTPCIIYMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...ATATATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CCA 90 bp CTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTTTGGAAAGGGGAGTaGAATTGCAGGTGGGTATTG +
Preference number: 2 (lower is better)
Translates to: LPCTLLILGNVTHITSDHLWKGE*NCRWVL
Trigger: CAATACCCACCTGCAATTCCACTCCCCTTTCCAAAG...GTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp AGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCAAGAAGTCTGCAACTaGTTCAGTCTTTGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: RWVLSRGAFTLSVWCESFQEVCN*FSLCLD
Trigger: GTCCAGACAAAGACTGAATCAGTTGCAGACTTCTTG...AAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677926.1
3UTR-3UTR TCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAATTTCCATTTGACAGATaGGGAAATGTGCTCAGAGAA +
Preference number: 2 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKFPFDR*GNVLRE
Trigger: TTCTCTGAGCACATTTCCTCATCTGTCAAATGGAAA...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR GCA 90 bp GAATTAGACAGTGATGAGACTTCCTGGTCTACTTGGCTCCAAAGCCTTTGTCCTATACAGTATATTAAATaGCACAGTGGAGAGATGAAC +
Preference number: 2 (lower is better)
Translates to: ELDSDETSWSTWLQSLCPIQYIK*HSGEMN
Trigger: GTTCATCTCTCCACTGTGGCATTTAATATACTGTAT...AGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACTGTCTAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CCA 90 bp AGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCTTTCCACTAGACCAACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 2 (lower is better)
Translates to: RNWAQSHVFKTKVLSTRPTSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...TGGTCTAGTGGAAAGAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp AGTGCTGTTACAAACTGCCTGAGTAGTTTTCACATTGATACTTTGTACATTACATCACTACCCCTCACCTaGCTGGAAGTGATGGATTTC +
Preference number: 2 (lower is better)
Translates to: SAVTNCLSSFHIDTLYITSLPLT*LEVMDF
Trigger: GAAATCCATCACTTCCAGCCAGGTGAGGGGTAGTGA...TGTAATGTACAAAGTATCAATGTGAAAACTACTCAGGCAGTTTGTAACAGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCATGTCTTACTTTCCATaGGCTCCTGATTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: SLVLFSYLAMSLILLVITMSYFP*APDSVF
Trigger: AAAGACTGAATCAGGAGCTCATGGAAAGTAAGACAT...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677219.1
ENST00000678038.1
3UTR-3UTR TCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAATACAGTATTTCCATTTaGCAGATGAGGAAATGTGCT +
Preference number: 2 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKYSISI*QMRKCA
Trigger: AGCACATTTCCTCATCTGTCAAATGGAAATACTGTA...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR TCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGAAATGGAACTGTAGTCTaGGAGTGCTGTTACAAACTG +
Preference number: 2 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRNGTVV*ECCYKL
Trigger: CAGTTTGTAACAGCACTCTCAGACTACAGTTCCATT...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR GCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAAAGTGTCAAGAAGTCTaGAACTTTCAAATGGGAAAG +
Preference number: 2 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKKCQEV*NFQMGK
Trigger: CTTTCCCATTTGAAAGTTGCAGACTTCTTGACACTT...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp CTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 2 (lower is better)
Translates to: LPCTLLILGNVTHITSDHTSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...GTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp CTAACATTTATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATTGTACTGGACTGGAATaGACTGGAGCCAGACATTCT +
Preference number: 2 (lower is better)
Translates to: LTFMVKHTISFICPSQLHCTGLE*TGARHS
Trigger: AGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACA...ATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATAAATGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR-3UTR TCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGAATGTCTTACTTTCCATaGGCTCCTGATTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRMSYFP*APDSVF
Trigger: AAAGACTGAATCAGGAGCTCATGGAAAGTAAGACAT...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677219.1
3UTR-3UTR CCA 90 bp CTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACTACTTTTGGGACAATTaGGGAGGTTTGAAAATGTAC +
Preference number: 2 (lower is better)
Translates to: LPCTLLILGNVTHITSDHYFWDN*GGLKMY
Trigger: GTACATTTTCAAACCTCCCCAATTGTCCCAAAAGTA...GTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp TTCCTTGCTGAAATACTTAGGGGTAAAGTGTCAAGAAGTCTGCAACTTTCAAATACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 2 (lower is better)
Translates to: FLAEILRGKVSRSLQLSNTSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...ATTTGAAAGTTGCAGACTTCTTGACACTTTACCCCTAAGTATTTCAGCAAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp CTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACTACTCTTCTCATACTTaGCAATGTCACTCATATTAC +
Preference number: 2 (lower is better)
Translates to: LPCTLLILGNVTHITSDHYSSHT*QCHSYY
Trigger: GTAATATGAGTGACATTGCCAAGTATGAGAAGAGTA...GTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGATACTTTTGGGACAATTaGGGAGGTTTGAAAATGTAC +
Preference number: 2 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRYFWDN*GGLKMY
Trigger: GTACATTTTCAAACCTCCCCAATTGTCCCAAAAGTA...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR GCA 90 bp TTTATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTAATACAGTATATTAAATaGCACAGTGGAGAGATGAAC +
Preference number: 2 (lower is better)
Translates to: FMVKHTISFICPSQLHALIQYIK*HSGEMN
Trigger: GTTCATCTCTCCACTGTGGCATTTAATATACTGTAT...TAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR CCA 72 bp TGCCTGGCCTGGTCCCAGCAGAGAGTTACTCAGGCCTaGAGCCAGGTCTTTCTAGGGGGACTACTGAATGGA +
Preference number: 3 (lower is better)
Translates to: CLAWSQQRVTQA*SQVFLGGLLNG
Trigger: TCCATTCAGTAGTCCCCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCTCTGCTGGGACCAGGCCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR GCA 72 bp CCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTaGAGGCACAGACTGAAGTTTAACTGTGGGCCCTCA +
Preference number: 3 (lower is better)
Translates to: PCSSGQWVLASY*RHRLKFNCGPS
Trigger: TGAGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CAA 90 bp TCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGCAAACATGCCACACCTaGCTCCAGTGGACAATGGGT +
Preference number: 3 (lower is better)
Translates to: SLQVSVPEVKRKGSPHSGQTCHT*LQWTMG
Trigger: ACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTG...CCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR GCA 72 bp TACTATTGTCCCCCTCCTCTTGCCATTCCTCAAACATaGCACACCTTGCTCCAGTGGACAATGGGTACTGGC +
Preference number: 3 (lower is better)
Translates to: YYCPPPLAIPQT*HTLLQWTMGTG
Trigger: GCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTGAGGAATGGCAAGAGGAGGGGGACAATAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR CCA 72 bp GGCCTGGAGCCAGGTCTTTCTAGGGGGACTACTGAATaGAACTGTAGTCTGAGAGTGCTGTTACAAACTGCC +
Preference number: 3 (lower is better)
Translates to: GLEPGLSRGTTE*NCSLRVLLQTA
Trigger: GGCAGTTTGTAACAGCACTCTCAGACTACAGTTCCATTCAGTAGTCCCCCTAGAAAGACCTGGCTCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CAA 90 bp GGAGACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGAAAGGGGAGTGGAATaGCAGGTGGGTATTGTCAAG +
Preference number: 3 (lower is better)
Translates to: GDIFQFFVPLSAASMLPSERGVE*QVGIVK
Trigger: CTTGACAATACCCACCTGCAATTCCACTCCCCTTTC...GCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CCA 72 bp CAAGCAGCTTTGCCTTTGTACTGGACTGGAATGGACTaGAGCCAGACATTCTCTCCACTCCTGGCCTTTTCA +
Preference number: 3 (lower is better)
Translates to: QAALPLYWTGMD*SQTFSPLLAFS
Trigger: TGAAAAGGCCAGGAGTGGAGAGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR CCA 72 bp GACTTGGCTGCAATGCAAGCAGCTTTGCCTTTGTACTaGACTGGAATGGACTGGAGCCAGACATTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: DLAAMQAALPLY*TGMDWSQTFSP
Trigger: TGGAGAGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGCAGCCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR TCA 72 bp AGCGCAGAGCAGGCAGTGGTAATTACGGGTAAGAAATaGGTCCATGTAGGCTGGAAGATGCAAGGCATTCAC +
Preference number: 3 (lower is better)
Translates to: SAEQAVVITGKK*VHVGWKMQGIH
Trigger: GTGAATGCCTTGCATCTTCCAGCCTACATGGACTCATTTCTTACCCGTAATTACCACTGCCTGCTCTGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR TCA 72 bp GACAATGGGTACTGGCATCGTACTGCAGGCACAGACTaGAGTTTAACTGTGGGCCCTCAAGCAAAGTGTATG +
Preference number: 3 (lower is better)
Translates to: DNGYWHRTAGTD*SLTVGPQAKCM
Trigger: CATACACTTTGCTTGAGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTACCCATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR GCA 72 bp TACGTGTGTAAGACTTGGCTGCAATGCAAGCAGCTTTaGCTTTGTACTGGACTGGAATGGACTGGAGCCAGA +
Preference number: 3 (lower is better)
Translates to: YVCKTWLQCKQL*LCTGLEWTGAR
Trigger: TCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGCAGCCAAGTCTTACACACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR CCA 72 bp GGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTG +
Preference number: 3 (lower is better)
Translates to: GPRGKEKGKSTL*VYGLEVEQAIL
Trigger: CAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678333.1
3UTR CCA 72 bp GGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTCGAGCAAGCTGATTCA +
Preference number: 3 (lower is better)
Translates to: GPRGKEKGKSTL*VYGLEVEQADS
Trigger: TGAATCAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677900.1
3UTR GCA 72 bp TATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTaGAGTATCAGTTCTGATGAGAGGCATGACAGGTGT +
Preference number: 3 (lower is better)
Translates to: YEASEYEVEAWN*SISSDERHDRC
Trigger: ACACCTGTCATGCCTCTCATCAGAACTGATACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR GCA 72 bp GAATGGAACCTCTACGTGTGTAAGACTTGGCTGCAATaGAAGCAGCTTTGCCTTTGTACTGGACTGGAATGG +
Preference number: 3 (lower is better)
Translates to: EWNLYVCKTWLQ*KQLCLCTGLEW
Trigger: CCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGCAGCCAAGTCTTACACACGTAGAGGTTCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR CCA 72 bp TTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTaGAATTGCAGTATCAGTTCTGATGAGAGGCATGAC +
Preference number: 3 (lower is better)
Translates to: FTYEASEYEVEA*NCSISSDERHD
Trigger: GTCATGCCTCTCATCAGAACTGATACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CCA 72 bp GGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTA +
Preference number: 3 (lower is better)
Translates to: GPRGKEKGKSTL*VYGLEVEQAIL
Trigger: TAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CAA 90 bp GGAGACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCCTACAAAAGTTACTTTaGGGACAATTGGGGAGGTTT +
Preference number: 3 (lower is better)
Translates to: GDIFQFFVPLSAASMLPSLQKLL*GQLGRF
Trigger: AAACCTCCCCAATTGTCCCAAAAGTAACTTTTGTAG...GCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CAA 90 bp AGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAATCTGGGTTTATGGCCTaGAAGTCGAGCAAGCTGATT +
Preference number: 3 (lower is better)
Translates to: SLCPFCQTLMALCGGPEQSGFMA*KSSKLI
Trigger: AATCAGCTTGCTCGACTTCAAGGCCATAAACCCAGA...TTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677900.1
3UTR-3UTR CAA 90 bp TTCCTTGCTGAAATACTTAGGGGTAAAGTGTCAAGAAGTCTGCAACTTTCAAATAGCTATCTGCCCTCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: FLAEILRGKVSRSLQLSNSYLPS*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGAGGGCAGATAGCT...ATTTGAAAGTTGCAGACTTCTTGACACTTTACCCCTAAGTATTTCAGCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR-3UTR CAA 90 bp TTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTTACACCCAGATACTATaGTCCCCCTCCTCTTGCCAT +
Preference number: 3 (lower is better)
Translates to: FCQTLMALCGGPEQKAILYTQIL*SPSSCH
Trigger: ATGGCAAGAGGAGGGGGACAATAGTATCTGGGTGTA...AAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CAA 90 bp TGTAGGCTGGAAGATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGCTACAAAAGTTACTTTaGGGACAATTGGGGAGGTTT +
Preference number: 3 (lower is better)
Translates to: CRLEDARHSPMRPANMKSLQKLL*GQLGRF
Trigger: AAACCTCCCCAATTGTCCCAAAAGTAACTTTTGTAG...CGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATCTTCCAGCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR TCA 72 bp AGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTaGAGTCGAGCAAGCTATACTGATTCAGTCTTTGTC +
Preference number: 3 (lower is better)
Translates to: REREVHTLGLWP*SRASYTDSVFV
Trigger: GACAAAGACTGAATCAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678333.1
3UTR-3UTR CAA 90 bp GATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTGTACTCTTCTCATACTaGGCAATGTCACTCATATTA +
Preference number: 3 (lower is better)
Translates to: DARHSPMRPANMKSRPGIVLFSY*AMSLIL
Trigger: TAATATGAGTGACATTGCCAAGTATGAGAAGAGTAC...AATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CCA 72 bp ACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTTaGCTCCAAAGCCTTTGTCCTTTTTGTCAGACTCTG +
Preference number: 3 (lower is better)
Translates to: TELDSDETSWST*LQSLCPFCQTL
Trigger: CAGAGTCTGACAAAAAGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
3UTR GCA 72 bp TGTCATACCAGGCACTATGTTAGTCAGCATGATCCTTaGTTCAACAAGTTCTCAGTCCAGAGAAAAACAGAC +
Preference number: 3 (lower is better)
Translates to: CHTRHYVSQHDP*FNKFSVQRKTD
Trigger: GTCTGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
3UTR-3UTR CAA 90 bp AGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCTACAAAAGTTACTTTaGGGACAATTGGGGAGGTTT +
Preference number: 3 (lower is better)
Translates to: RWVLSRGAFTLSVWCESFLQKLL*GQLGRF
Trigger: AAACCTCCCCAATTGTCCCAAAAGTAACTTTTGTAG...AAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR GCA 72 bp TGCTATCTCTACTCTGCAGAAGTATTATCCACAGTCTaGTATATATCACTGCAGAGATTCCTGAAAGTCATT +
Preference number: 3 (lower is better)
Translates to: CYLYSAEVLSTV*YISLQRFLKVI
Trigger: AATGACTTTCAGGAATCTCTGCAGTGATATATAGCAGACTGTGGATAATACTTCTGCAGAGTAGAGATAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR TCA 72 bp TGGAACTGTAGTCTGAGAGTGCTGTTACAAACTGCCTaGGTAGTTTTCACATTGATACTTTGTACATTACAA +
Preference number: 3 (lower is better)
Translates to: WNCSLRVLLQTA*VVFTLILCTLQ
Trigger: TTGTAATGTACAAAGTATCAATGTGAAAACTACTCAGGCAGTTTGTAACAGCACTCTCAGACTACAGTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCTGTCTCCTGGCTGCCTaGCCTGGTCCCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SFNSLSPSLQLACCPAQSCLLAA*PGPSRE
Trigger: CTCTCTGCTGGGACCAGGCCAGGCAGCCAGGAGACA...GCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp GGAGACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCCTGGGATTACAGGAGTaGGCCACCTCCTGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GDIFQFFVPLSAASMLPSLGLQE*ATSCRA
Trigger: AGCCCGGCAGGAGGTGGCTCACTCCTGTAATCCCAG...GCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp ATCAGCAATGGATTCACACCTGATGTTAGCCACAGCTGTGGGCAGGCTCCTGGGGCCACAGTGGAGAGATaGACCAAGTGCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ISNGFTPDVSHSCGQAPGATVER*TKCCGS
Trigger: GCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGC...CCCAGGAGCCTGCCCACAGCTGTGGCTAACATCAGGTGTGAATCCATTGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000678193.1
CDS-3UTR TCA 90 bp AAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGACGGAGCAGGGGGCATaGTGGGCTGACCCACCACCC +
Preference number: 4 (lower is better)
Translates to: KQSFFLAGFGPRGKEKGKTEQGA*WADPPP
Trigger: GGGTGGTGGGTCAGCCCATCATGCCCCCTGCTCCGT...CTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679245.1
CDS-3UTR CCA 90 bp TGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACAGATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CHTLLQWTMGTGIVLQAQMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...CTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp ACCGTGCCCGGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAGCCACAGTGGAGAGATaGACCAAGTGCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TVPGHSQLFSTLLILFSQATVER*TKCCGS
Trigger: GCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGC...TTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCCGGGCACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR TCA 90 bp GCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATCCCAGTCCAAGACCATaGGGGCTTCACGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGFGPRGKEKGKSTLWVYPSPRP*GLHGAG
Trigger: CCCTGCTCCGTGAAGCCCTCATGGTCTTGGACTGGG...ATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679245.1
CDS-3UTR TCA 90 bp CTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTGAACTCCCGACCTTGTaGTCTCCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LAGFGPRGKEKGKSTLWVELPTL*SPCLSL
Trigger: GAGGCTGAGGCAGGGAGATCACAAGGTCGGGAGTTC...AACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR GCA 90 bp TCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTAGGGATGAGCCACCGTaGCCGGCCACTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SSLQVSVPEVKRKGSPHSRDEPP*PATPSY
Trigger: ATAGCTGGGAGTGGCCGGGCACGGTGGCTCATCCCT...AGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR GCA 90 bp GAGATGAACCAAGTGCTGTGGGAGCACCCACTGTCTGGGCTTAGACCTGATTCATCTCCGGTGCAGAACTaGCTAAAGTTCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: EMNQVLWEHPLSGLRPDSSPVQN*LKFSAV
Trigger: GACGGCCGAGAACTTTAGGCAGTTCTGCACCGGAGA...TGAATCAGGTCTAAGCCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372550.6
ENST00000679245.1
CDS-3UTR GCA 90 bp AAGGCCATACACGGAGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCGCTGACCCACCACCCTaGCGCTCGGTATCTCCCACC +
Preference number: 4 (lower is better)
Translates to: KAIHGGTGLNLMSSRLKFADPPP*RSVSPT
Trigger: GGTGGGAGATACCGAGCGGCAGGGTGGTGGGTCAGC...GAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCTCCGTGTATGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678308.1
CDS-3UTR GCA 90 bp AATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCAAGGGATGAGCCACCGTaGCCGGCCACTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: NPSSLQVSVPEVKRKGSPRDEPP*PATPSY
Trigger: ATAGCTGGGAGTGGCCGGGCACGGTGGCTCATCCCT...TGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR GCA 90 bp CTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTAGGGATGAGCCACCGTaGCCGGCCACTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LSVEVQNKKQSFFLAGFGRDEPP*PATPSY
Trigger: ATAGCTGGGAGTGGCCGGGCACGGTGGCTCATCCCT...ACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR CCA 90 bp TGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACAGGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: CHTLLQWTMGTGIVLQAQGKSTL*VYGLEV
Trigger: GACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCC...CTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCAGGTCACTACCCCTCACCTaGCTGGAAGTGATGGATTTC +
Preference number: 4 (lower is better)
Translates to: FNSLSPSLQLACCPAQSRSLPLT*LEVMDF
Trigger: GAAATCCATCACTTCCAGCCAGGTGAGGGGTAGTGA...CCTGCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp CAAAGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAAGAACTCCCGACCTTGTaGTCTCCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSLCPFCQTLMALCGGPEELPTL*SPCLSL
Trigger: GAGGCTGAGGCAGGGAGATCACAAGGTCGGGAGTTC...TTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR TCA 90 bp AACATGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCAGGGGACATCCCATATaGGACAATGCTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: NMPHLAPVDNGYWHRTAGRGHPI*DNAPSY
Trigger: ATAGCTGGGAGCATTGTCTCATATGGGATGTCCCCT...GCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR GCA 90 bp ATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGTGGGAGCACGCTGACCCACCACCCTaGCGCTCGGTATCTCCCACC +
Preference number: 4 (lower is better)
Translates to: IQYIKCHSGEMNQVLWEHADPPP*RSVSPT
Trigger: GGTGGGAGATACCGAGCGGCAGGGTGGTGGGTCAGC...GTGCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679245.1
CDS-3UTR GCA 90 bp GAGATGAACCAAGTGCTGTGGGAGCACCCACTGTCTGGGCTTAGACCTGATTCAGCCATTCCTCAAACATaGCACACCTTGCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EMNQVLWEHPLSGLRPDSAIPQT*HTLLQW
Trigger: CCACTGGAGCAAGGTGTGGCATGTTTGAGGAATGGC...TGAATCAGGTCTAAGCCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677312.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGACCACTGTTCGCCATaGAAAGCAGGCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WRSRTKSNPSSLQVSVPEDHCSP*KAGLEL
Trigger: CAGCTCCAGGCCTGCTTTCCATGGCGAACAGTGGTC...CTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCAGGCTTTGGAAAGGGGAGTaGAATTGCAGGTGGGTATTG +
Preference number: 4 (lower is better)
Translates to: FNSLSPSLQLACCPAQSRLWKGE*NCRWVL
Trigger: CAATACCCACCTGCAATTCCACTCCCCTTTCCAAAG...CCTGCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp CAGAGAGTTACTCAGGCCTGGAGCCAGGTCTTTCTAGGGGGACTACTGAATGGAGAGAGGCAATGGAAATaGGTGAGGAGGCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QRVTQAWSQVFLGGLLNGERQWK*VRRQEG
Trigger: CCCTTCTTGCCTCCTCACCCATTTCCATTGCCTCTC...TCCATTCAGTAGTCCCCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AACATGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACCTGGAAGAGGAGGTaGAGGGATCAGCAATGGATT +
Preference number: 4 (lower is better)
Translates to: NMPHLAPVDNGYWHRTAGTWKRR*RDQQWI
Trigger: AATCCATTGCTGATCCCTCCACCTCCTCTTCCAGGT...GCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000678193.1
CDS-3UTR CCA 90 bp AACATGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCGCTTTGCCTTTGTACTaGACTGGAATGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: NMPHLAPVDNGYWHRTAGALPLY*TGMDWS
Trigger: GCTCCAGTCCATTCCAGTCCAGTACAAAGGCAAAGC...GCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR TCA 90 bp TTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGGGGTTAACAGGACTTaGATTTGCCACCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: FGPRGKEKGKSTLWVYGLGVNRT*ICHRHG
Trigger: GCCATGGCGGTGGCAAATTCAAGTCCTGTTAACCCC...AAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR TCA 90 bp GTACTGGCATCGTACTGCAGGCACAGACTGAAGTTTAACTGTGGGCCCTCAAGCGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: VLASYCRHRLKFNCGPSSEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...GCTTGAGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp GACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: DIFQFFVPLSAASMLPSAEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...TGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGTGGGAGCACCCACTGGCCACAGTGGAGAGATaGACCAAGTGCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: YIKCHSGEMNQVLWEHPLATVER*TKCCGS
Trigger: GCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGC...CAGTGGGTGCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGCATTTAATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372550.6
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp AAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTGCAGTCTGGTCTCGAACTCCTaGGCTCAAGCTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: KAFTYEASEYEVEAWNCSLVSNS*AQAICP
Trigger: AGGGCAGATAGCTTGAGCTCAGGAGTTCGAGACCAG...ACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp TGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACAGATGTACTTTGTAAGCTaGATGGTGTGCCAGGACCTA +
Preference number: 4 (lower is better)
Translates to: CHTLLQWTMGTGIVLQAQMYFVS*MVCQDL
Trigger: TAGGTCCTGGCACACCATGCAGCTTACAAAGTACAT...CTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CTTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATACCAGGCACTATCAGAAGTCGGGAGCGTaGGATTCCGGCGAACCTAAA +
Preference number: 4 (lower is better)
Translates to: LCKLHGVPGPKLCHTRHYQKSGA*DSGEPK
Trigger: TTTAGGTTCGCCGGAATCCCACGCTCCCGACTTCTG...ATAGTGCCTGGTATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676675.1
CDS-3UTR CCA 90 bp TCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCAGGGGGACTACTGAATaGAACTGTAGTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SFNSLSPSLQLACCPAQSRGTTE*NCSLRV
Trigger: CACTCTCAGACTACAGTTCCATTCAGTAGTCCCCCT...GCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp GGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAAAGGGTAGACTGTGGGCAGGCTCCTaGGAAGTGCTGGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: GHSQLFSTLLILFSQKGRLWAGS*EVLGGF
Trigger: AAATCCTCCCAGCACTTCCCAGGAGCCTGCCCACAG...TCTACCCTTTTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR TCA 90 bp TCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACAGCTCCTGGGAAGTGCTaGTTCAGTCTTTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SFFLAGFGPRGKEKGKSTAPGKC*FSLCLD
Trigger: GTCCAGACAAAGACTGAATCAGCACTTCCCAGGAGC...TGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676675.1
CDS-3UTR TCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAACTGGGATTACAGGAGTaGGCCACCTCCTGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKLGLQE*ATSCRA
Trigger: AGCCCGGCAGGAGGTGGCTCACTCCTGTAATCCCAG...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp CTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTTCTCCGGTGCAGAACTaGCTAAAGTTCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LSVEVQNKKQSFFLAGFGSPVQN*LKFSAV
Trigger: GACGGCCGAGAACTTTAGGCAGTTCTGCACCGGAGA...ACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCAATGCGGCCAACTTCCTaGAATCAGCGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NPSSLQVSVPEVKRKGSPMRPTS*NQRESV
Trigger: GACACTCTCCCGCTGATTGCAGGAAGTTGGCCGCAT...TGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679245.1
CDS-3UTR GCA 90 bp TCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACAGCAATCCTTCTTCCTTaGAGGTTTCGGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SFFLAGFGPRGKEKGKSTAILLP*RFRSQR
Trigger: CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGC...TGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp TTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATACCAGGCACTATGGCAATCCTTCTTCCTTaGAGGTTTCGGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FVSCMVCQDLSSVIPGTMAILLP*RFRSQR
Trigger: CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGC...CATAGTGCCTGGTATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp TTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGCAATCCTTCTTCCTTaGAGGTTTCGGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FGPRGKEKGKSTLWVYGLAILLP*RFRSQR
Trigger: CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGC...AAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp GACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGTCGAGGCCTGGAATTaGAGTATCAGTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: DIFQFFVPLSAASMLPSAVEAWN*SISSDE
Trigger: CTCATCAGAACTGATACTGCAATTCCAGGCCTCGAC...TGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp TCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGTAAGCTGCATGGTGTaGCAGGACCTAAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SSLQVSVPEVKRKGSPHSVSCMV*QDLSSV
Trigger: GACAGAGCTTAGGTCCTGGCACACCATGCAGCTTAC...AGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AAGGGTAGAACAGGTCAGATTCTCACCATAGGTCAGACCTTTAGGTCCCCAGAGGCCATTCCTCAAACATaGCACACCTTGCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KGRTGQILTIGQTFRSPEAIPQT*HTLLQW
Trigger: CCACTGGAGCAAGGTGTGGCATGTTTGAGGAATGGC...CTCTGGGGACCTAAAGGTCTGACCTATGGTGAGAATCTGACCTGTTCTACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR CCA 90 bp GTACTGGCATCGTACTGCAGGCACAGACTGAAGTTTAACTGTGGGCCCTCAAGCAGTGATGAGACTTCCTaGTCTACTTGGCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VLASYCRHRLKFNCGPSSSDETS*STWLQS
Trigger: GCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACT...GCTTGAGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CAGAGAGTTACTCAGGCCTGGAGCCAGGTCTTTCTAGGGGGACTACTGAATGGAAGGGGGACTACTGAATaGAACTGTAGTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: QRVTQAWSQVFLGGLLNGRGTTE*NCSLRV
Trigger: CACTCTCAGACTACAGTTCCATTCAGTAGTCCCCCT...TCCATTCAGTAGTCCCCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp GATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTAGAGTTACTCAGGCCTaGAGCCAGGTCTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: DARHSPMRPANMKSRPGIRVTQA*SQVFLG
Trigger: CCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCT...AATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCTTTCCACTAGACCATGTCTCCTGGCTGCCTaGCCTGGTCCCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RNWAQSHVFKTKVLSTRPCLLAA*PGPSRE
Trigger: CTCTCTGCTGGGACCAGGCCAGGCAGCCAGGAGACA...TGGTCTAGTGGAAAGAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATACCAGGCACTATGGTGGACAATGGGTACTaGCATCGTACTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: FVSCMVCQDLSSVIPGTMVDNGY*HRTAGT
Trigger: TGTGCCTGCAGTACGATGCCAGTACCCATTGTCCAC...CATAGTGCCTGGTATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCGTGGACAATGGGTACTaGCATCGTACTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: LCGGPEQKAILLPCRFRSVDNGY*HRTAGT
Trigger: TGTGCCTGCAGTACGATGCCAGTACCCATTGTCCAC...GGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCACACCTTGCTCCAGTaGACAATGGGTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: LCGGPEQKAILLPCRFRSHTLLQ*TMGTGI
Trigger: GATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTG...GGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGCTATAACATGGAGGTCAGTGTaGGATGGGGAGGTAAGCACC +
Preference number: 4 (lower is better)
Translates to: EKGKSTLWVYGLEVEQAITWRSV*DGEVST
Trigger: GGTGCTTACCTCCCCATCCCACACTGACCTCCATGT...TATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR TCA 90 bp ATGTACTTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATACCAGGCGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: MYFVSCMVCQDLSSVIPGEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...GCCTGGTATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp TTCCTTGCTGAAATACTTAGGGGTAAAGTGTCAAGAAGTCTGCAACTTTCAAATACGGAGCAGGGGGCATaGTGGGCTGACCCACCACCC +
Preference number: 4 (lower is better)
Translates to: FLAEILRGKVSRSLQLSNTEQGA*WADPPP
Trigger: GGGTGGTGGGTCAGCCCATCATGCCCCCTGCTCCGT...ATTTGAAAGTTGCAGACTTCTTGACACTTTACCCCTAAGTATTTCAGCAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678308.1
CDS-3UTR TCA 90 bp CTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCCCAGTCCAAGACCATaGGGGCTTCACGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPCTLLILGNVTHITSDHPSPRP*GLHGAG
Trigger: CCCTGCTCCGTGAAGCCCTCATGGTCTTGGACTGGG...GTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678308.1
CDS-3UTR TCA 90 bp TCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTCTTTTTGTCAGACTCTaGTGGCTCTCTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSLQVSVPEVKRKGSPHSLFVRL*WLSVEV
Trigger: GACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAG...AGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp CCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCCTGGGATTACAGGAGTaGGCCACCTCCTGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PCTLLILGNVTHITSDHLLGLQE*ATSCRA
Trigger: AGCCCGGCAGGAGGTGGCTCACTCCTGTAATCCCAG...GAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp AAGGCCATACACGGAGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCCTGGTCTCGAACTCCTaGGCTCAAGCTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: KAIHGGTGLNLMSSRLKFLVSNS*AQAICP
Trigger: AGGGCAGATAGCTTGAGCTCAGGAGTTCGAGACCAG...GAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCTCCGTGTATGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp GGAGACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCATTACGGGTAAGAAATaGGTCCATGTAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GDIFQFFVPLSAASMLPSITGKK*VHVGWK
Trigger: CTTCCAGCCTACATGGACTCATTTCTTACCCGTAAT...GCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp AAGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAACTGCAGGCACAGACTaGAGTTTAACTGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KPLSFLSDSDGSLWRSRTTAGTD*SLTVGP
Trigger: AGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGT...TGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp GGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAACTGCAGGCACAGACTaGAGTTTAACTGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GKEKGKSTLWVYGLEVEQTAGTD*SLTVGP
Trigger: AGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGT...TTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp CTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTACTGCAGGCACAGACTaGAGTTTAACTGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSVEVQNKKQSFFLAGFGTAGTD*SLTVGP
Trigger: AGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGT...ACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp TGGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTAAGAGAACAGAGTAAGTACGAACTCCCGACCTTGTaGTCTCCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WVYGLEVEQAILREQSKYELPTL*SPCLSL
Trigger: GAGGCTGAGGCAGGGAGATCACAAGGTCGGGAGTTC...GTACTTACTCTGTTCTCTTAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR TCA 90 bp TTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTAGGGGACATCCCATATaGGACAATGCTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: FGPRGKEKGKSTLWVYGLRGHPI*DNAPSY
Trigger: ATAGCTGGGAGCATTGTCTCATATGGGATGTCCCCT...AAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR GCA 90 bp GTGATGGATTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTAGCTGACCCACCACCCTaGCGCTCGGTATCTCCCACC +
Preference number: 4 (lower is better)
Translates to: VMDFSLVLFSYLAMSLILADPPP*RSVSPT
Trigger: GGTGGGAGATACCGAGCGGCAGGGTGGTGGGTCAGC...TAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAATCCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678308.1
CDS-3UTR GCA 90 bp GTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGGCAATCCTTCTTCCTTaGAGGTTTCGGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VKRKGSPHSGFMALKSSKAILLP*RFRSQR
Trigger: CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGC...CTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp GATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTGCAATCCTTCTTCCTTaGAGGTTTCGGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DGSLWRSRTKSNPSSLQVAILLP*RFRSQR
Trigger: CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGC...AACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAGCAATCCTTCTTCCTTaGAGGTTTCGGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLCPFCQTLMALCGGPEQAILLP*RFRSQR
Trigger: CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGC...TTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGCTAGTAAGCTGCATGGTGTaGCAGGACCTAAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KRKGSPHSGFMALKSSKLVSCMV*QDLSSV
Trigger: GACAGAGCTTAGGTCCTGGCACACCATGCAGCTTAC...TAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp ACTGAAGAGAATGGAACCTCTACGTGTGTAAGACTTGGCTGCAATGCAAGCAGCGTAAGCTGCATGGTGTaGCAGGACCTAAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TEENGTSTCVRLGCNASSVSCMV*QDLSSV
Trigger: GACAGAGCTTAGGTCCTGGCACACCATGCAGCTTAC...GCTGCTTGCATTGCAGCCAAGTCTTACACACGTAGAGGTTCCATTCTCTTCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR GCA 90 bp GCCCGGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAAAGGGATGTACTTTGTAAGCTaGATGGTGTGCCAGGACCTA +
Preference number: 4 (lower is better)
Translates to: ARPLPAILYTPNPLFPKGMYFVS*MVCQDL
Trigger: TAGGTCCTGGCACACCATGCAGCTTACAAAGTACAT...CCCTTTTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR GCA 90 bp TCCCAAAAGGGTAGAACAGGTCAGATTCTCACCATAGGTCAGACCTTTAGGTCCGCCATTCCTCAAACATaGCACACCTTGCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SQKGRTGQILTIGQTFRSAIPQT*HTLLQW
Trigger: CCACTGGAGCAAGGTGTGGCATGTTTGAGGAATGGC...GGACCTAAAGGTCTGACCTATGGTGAGAATCTGACCTGTTCTACCCTTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR CCA 90 bp TTGACTGAAGTCACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTTGGCTCGACCACTGTTCGCCATaGAAAGCAGGCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LTEVTELDSDETSWSTWLDHCSP*KAGLEL
Trigger: CAGCTCCAGGCCTGCTTTCCATGGCGAACAGTGGTC...GAGCCAAGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGTGACTTCAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATGACCACTGTTCGCCATaGAAAGCAGGCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SFLSDSDGSLWRSRTKSNDHCSP*KAGLEL
Trigger: CAGCTCCAGGCCTGCTTTCCATGGCGAACAGTGGTC...ATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCAGAAGTCGGGAGCGTaGGATTCCGGCGAACCTAAA +
Preference number: 4 (lower is better)
Translates to: PFCQTLMALCGGPEQKAIQKSGA*DSGEPK
Trigger: TTTAGGTTCGCCGGAATCCCACGCTCCCGACTTCTG...GATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677900.1
CDS-3UTR CCA 90 bp ATGTACTTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATACCAGGCGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: MYFVSCMVCQDLSSVIPGGKSTL*VYGLEV
Trigger: GACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCC...GCCTGGTATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAAGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GCTCCAAAGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCTCTGATGGCTCTCTGTaGAGGTCCAGAACAAAAAGC +
Preference number: 4 (lower is better)
Translates to: APKPLSFLSDSDGSLWRSSDGSL*RSRTKS
Trigger: GCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA...GGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCTTTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTCTGATGGCTCTCTGTaGAGGTCCAGAACAAAAAGC +
Preference number: 4 (lower is better)
Translates to: LAGFGPRGKEKGKSTLWVSDGSL*RSRTKS
Trigger: GCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA...AACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTGTGGACAATGGGTACTaGCATCGTACTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: QTLMALCGGPEQKAILLPVDNGY*HRTAGT
Trigger: TGTGCCTGCAGTACGATGCCAGTACCCATTGTCCAC...AGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp AGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTGCTCCAGTGGACAATaGGTACTGGCATCGTACTGC +
Preference number: 4 (lower is better)
Translates to: RKGSPHSGFMALKSSKLYCSSGQ*VLASYC
Trigger: GCAGTACGATGCCAGTACCCATTGTCCACTGGAGCA...GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAATGCTCCAGTGGACAATaGGTACTGGCATCGTACTGC +
Preference number: 4 (lower is better)
Translates to: GKEKGKSTLWVYGLEVEQCSSGQ*VLASYC
Trigger: GCAGTACGATGCCAGTACCCATTGTCCACTGGAGCA...TTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAAAGGGTAGAGCACCTCAGAGGAACTaGAAGGGGACATCCCATATG +
Preference number: 4 (lower is better)
Translates to: GHSQLFSTLLILFSQKGRAPQRN*KGTSHM
Trigger: CATATGGGATGTCCCCTTCCAGTTCCTCTGAGGTGC...TCTACCCTTTTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR CCA 90 bp GGACCTAAGCTCTGTCATACCAGGCACTATGTTAGTCAGCATGATCCTTGCTTCGCACCTCAGAGGAACTaGAAGGGGACATCCCATATG +
Preference number: 4 (lower is better)
Translates to: GPKLCHTRHYVSQHDPCFAPQRN*KGTSHM
Trigger: CATATGGGATGTCCCCTTCCAGTTCCTCTGAGGTGC...GAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTATGACAGAGCTTAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR CCA 90 bp CAGACCTTTAGGTCCCCAGAGCAAAGTTGGGCAGTAAATTACAAAAGAACCAGGGAGGTCAGTGTGGGATaGGGAGGTAAGCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: QTFRSPEQSWAVNYKRTREVSVG*GGKHLR
Trigger: TCTGAGGTGCTTACCTCCCCATCCCACACTGACCTC...CCTGGTTCTTTTGTAATTTACTGCCCAACTTTGCTCTGGGGACCTAAAGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR CCA 90 bp GTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGGCCTTTGTACTGGACTaGAATGGACTGGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VKRKGSPHSGFMALKSSKAFVLD*NGLEPD
Trigger: GTCTGGCTCCAGTCCATTCCAGTCCAGTACAAAGGC...CTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR CAA 72 bp TTCCTGGTCTACTTGGCTCCAAAGCCTTTGTCCTTTTaGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLVYLAPKPLSF*SDSDGSLWRSR
Trigger: TCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp AGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SLCPFCQTLMALCGGPEQEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...TTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp AACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGCCACAGTGGAGAGATaGACCAAGTGCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NKKQSFFLAGFGPRGKEKATVER*TKCCGS
Trigger: GCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGC...TTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp AGTGCTGTTACAAACTGCCTGAGTAGTTTTCACATTGATACTTTGTACATTACAACGGAGCAGGGGGCATaGTGGGCTGACCCACCACCC +
Preference number: 4 (lower is better)
Translates to: SAVTNCLSSFHIDTLYITTEQGA*WADPPP
Trigger: GGGTGGTGGGTCAGCCCATCATGCCCCCTGCTCCGT...TGTAATGTACAAAGTATCAATGTGAAAACTACTCAGGCAGTTTGTAACAGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678308.1
CDS-3UTR TCA 90 bp TACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTGGGAATGTCTTACTTCCCAGTCCAAGACCATaGGGGCTTCACGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YLAMSLILLVITSGNVLLPSPRP*GLHGAG
Trigger: CCCTGCTCCGTGAAGCCCTCATGGTCTTGGACTGGG...AAGTAAGACATTCCCAGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678308.1
CDS-3UTR TCA 90 bp CTTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATACCAGGCACTATCTGGGTTTATGGCCTTaGAGTCGAGCAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: LCKLHGVPGPKLCHTRHYLGLWP*SRASYT
Trigger: AGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAG...ATAGTGCCTGGTATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp GGTCCCAAGGGGTTTCATGGCTTGACTGAAGTCACAGAATTAGACAGTGATGAGCTTTTTGTCAGACTCTaGTGGCTCTCTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GPKGFHGLTEVTELDSDELFVRL*WLSVEV
Trigger: GACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAG...CTCATCACTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTTGGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp AAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGCTTTTTGTCAGACTCTaGTGGCTCTCTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KQSFFLAGFGPRGKEKGKLFVRL*WLSVEV
Trigger: GACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAG...CTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp CAAGTGCTGTGGGAGCACCCACTGTCTGGGCTTAGACCTGATTCAGTCTTTGTCGTTTCATGGCTTGACTaGAGTCACAGAATTAGACAG +
Preference number: 4 (lower is better)
Translates to: QVLWEHPLSGLRPDSVFVVSWLD*SHRIRQ
Trigger: CTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAAC...GACAAAGACTGAATCAGGTCTAAGCCCAGACAGTGGGTGCTCCCACAGCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677312.1
ENST00000679245.1
CDS-3UTR TCA 90 bp GATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTAGCTGGCAGAGCTTCTaGTTCAGTCTTTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: DGSLWRSRTKSNPSSLQVSWQSF*FSLCLD
Trigger: GTCCAGACAAAGACTGAATCAGAAGCTCTGCCAGCT...AACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR GCA 90 bp TCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACAAAACATGCCACACCTTaGTCCAGTGGACAATGGGTA +
Preference number: 4 (lower is better)
Translates to: SFFLAGFGPRGKEKGKSTKHATP*SSGQWV
Trigger: TACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTT...TGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GAGCAAGCTATACTAAGAGAACAGAGTAAGTACACCCAGATACTATTGTCCCCCATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EQAILREQSKYTQILLSPMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...GGGGGACAATAGTATCTGGGTGTACTTACTCTGTTCTCTTAGTATAGCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CTAAGCTCTGTCATACCAGGCACTATGTTAGTCAGCATGATCCTTGCTTCAACAATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSVIPGTMLVSMILASTMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...TGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTATGACAGAGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GKEKGKSTLWVYGLEVEQGKSTL*VYGLEV
Trigger: GACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCC...TTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATTCTGATGGCTCTCTGTaGAGGTCCAGAACAAAAAGC +
Preference number: 4 (lower is better)
Translates to: AGFGPRGKEKGKSTLWVYSDGSL*RSRTKS
Trigger: GCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA...ATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCTCTGATGGCTCTCTGTaGAGGTCCAGAACAAAAAGC +
Preference number: 4 (lower is better)
Translates to: LCGGPEQKAILLPCRFRSSDGSL*RSRTKS
Trigger: GCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA...GGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGACTTCCTGGTCTACTTaGCTCCAAAGCCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ALCGGPEQKAILLPCRFRTSWST*LQSLCP
Trigger: AGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGT...CCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CAGATTCTCACCATAGGTCAGACCTTTAGGTCCCCAGAGCAAAGTTGGGCAGTAAGTGATGAGACTTCCTaGTCTACTTGGCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: QILTIGQTFRSPEQSWAVSDETS*STWLQS
Trigger: GCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACT...TACTGCCCAACTTTGCTCTGGGGACCTAAAGGTCTGACCTATGGTGAGAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR CCA 90 bp TGTAGGCTGGAAGATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGCTTTGGAAAGGGGAGTaGAATTGCAGGTGGGTATTG +
Preference number: 4 (lower is better)
Translates to: CRLEDARHSPMRPANMKSLWKGE*NCRWVL
Trigger: CAATACCCACCTGCAATTCCACTCCCCTTTCCAAAG...CGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATCTTCCAGCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AAGGCCATACACGGAGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCAGAGTTACTCAGGCCTaGAGCCAGGTCTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: KAIHGGTGLNLMSSRLKFRVTQA*SQVFLG
Trigger: CCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCT...GAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCTCCGTGTATGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp GACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCATATGAAGTCGAGGCCTaGAATTGCAGTATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DIFQFFVPLSAASMLPSAYEVEA*NCSISS
Trigger: AGAACTGATACTGCAATTCCAGGCCTCGACTTCATA...TGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SFNSLSPSLQLACCPAQSTSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...GCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGACCTGGAAGAGGAGGTaGAGGGATCAGCAATGGATT +
Preference number: 4 (lower is better)
Translates to: SDGSLWRSRTKSNPSSLQTWKRR*RDQQWI
Trigger: AATCCATTGCTGATCCCTCCACCTCCTCTTCCAGGT...CTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000678193.1
CDS-3UTR CCA 90 bp AAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGACACACCTTGCTCCAGTaGACAATGGGTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: KSNPSSLQVSVPEVKRKGHTLLQ*TMGTGI
Trigger: GATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTG...TCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTTGTACTGGACTGGAATaGACTGGAGCCAGACATTCT +
Preference number: 4 (lower is better)
Translates to: LQVSVPEVKRKGSPHSGFCTGLE*TGARHS
Trigger: AGAATGTCTGGCTCCAGTCCATTCCAGTCCAGTACA...AAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
3UTR CAA 72 bp CTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTaGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LWRSRTKSNPSS*QVSVPEVKRKG
Trigger: TCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp CCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: PFCQTLMALCGGPEQKAIEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...GATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp GATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTCTGGGTTTATGGCCTTaGAGTCGAGCAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: DGSLWRSRTKSNPSSLQVLGLWP*SRASYT
Trigger: AGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAG...AACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp CCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTTTTGTCAGACTCTaGTGGCTCTCTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PFCQTLMALCGGPEQKAILFVRL*WLSVEV
Trigger: GACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAG...GATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp CCCAAGGGGTTTCATGGCTTGACTGAAGTCACAGAATTAGACAGTGATGAGACTCTTTTTGTCAGACTCTaGTGGCTCTCTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PKGFHGLTEVTELDSDETLFVRL*WLSVEV
Trigger: GACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAG...AGTCTCATCACTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp GGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGGTTTCATGGCTTGACTaGAGTCACAGAATTAGACAG +
Preference number: 4 (lower is better)
Translates to: GGPEQKAILLPCRFRSQRVSWLD*SHRIRQ
Trigger: CTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAAC...CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAATCTCCGGTGCAGAACTaGCTAAAGTTCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKSPVQN*LKFSAV
Trigger: GACGGCCGAGAACTTTAGGCAGTTCTGCACCGGAGA...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAATGCGGCCAACTTCCTaGAATCAGCGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKMRPTS*NQRESV
Trigger: GACACTCTCCCGCTGATTGCAGGAAGTTGGCCGCAT...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678308.1
CDS-3UTR GCA 90 bp AACATGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACTATCTCATTTATTTaGCCTTCACAACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: NMPHLAPVDNGYWHRTAGTISFI*PSQLHA
Trigger: TGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGT...GCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp ACTGAAGAGAATGGAACCTCTACGTGTGTAAGACTTGGCTGCAATGCAAGCAGCGTACTGGCATCGTACTaGAGGCACAGACTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TEENGTSTCVRLGCNASSVLASY*RHRLKF
Trigger: AAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTAC...GCTGCTTGCATTGCAGCCAAGTCTTACACACGTAGAGGTTCCATTCTCTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR GCA 90 bp AAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGGTACTGGCATCGTACTaGAGGCACAGACTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: KQSFFLAGFGPRGKEKGKVLASY*RHRLKF
Trigger: AAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTAC...CTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp GCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATTTCAAGCAATTCTCCTaGTTCAACCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AGFGPRGKEKGKSTLWVYFKQFS*FNLLSS
Trigger: GCTACTCAGGAGGTTGAAGCAGGAGAATTGCTTGAA...ATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR CCA 90 bp CAGACCTTTAGGTCCCCAGAGCAAAGTTGGGCAGTAAATTACAAAAGAACCAGGGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QTFRSPEQSWAVNYKRTRGKSTL*VYGLEV
Trigger: GACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCC...CCTGGTTCTTTTGTAATTTACTGCCCAACTTTGCTCTGGGGACCTAAAGGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR CCA 90 bp CCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PFCQTLMALCGGPEQKAIGKSTL*VYGLEV
Trigger: GACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCC...GATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp AGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGCTATACACTTCCTGGTCTACTTaGCTCCAAAGCCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RKGSPHSGFMALKSSKLYTSWST*LQSLCP
Trigger: AGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGT...GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTACTTCCTGGTCTACTTaGCTCCAAAGCCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QTLMALCGGPEQKAILLPTSWST*LQSLCP
Trigger: AGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGT...AGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGAGTGATGAGACTTCCTaGTCTACTTGGCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SDGSLWRSRTKSNPSSLQSDETS*STWLQS
Trigger: GCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACT...CTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCAGGTACTCTTCTCATACTTaGCAATGTCACTCATATTAC +
Preference number: 4 (lower is better)
Translates to: FNSLSPSLQLACCPAQSRYSSHT*QCHSYY
Trigger: GTAATATGAGTGACATTGCCAAGTATGAGAAGAGTA...CCTGCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AGCTCTGTCATACCAGGCACTATGTTAGTCAGCATGATCCTTGCTTCAACAAGTTGCTCCAGTGGACAATaGGTACTGGCATCGTACTGC +
Preference number: 4 (lower is better)
Translates to: SSVIPGTMLVSMILASTSCSSGQ*VLASYC
Trigger: GCAGTACGATGCCAGTACCCATTGTCCACTGGAGCA...ACTTGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTATGACAGAGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GCTATACTAAGAGAACAGAGTAAGTACACCCAGATACTATTGTCCCCCTCCTCTCACACCTTGCTCCAGTaGACAATGGGTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: AILREQSKYTQILLSPSSHTLLQ*TMGTGI
Trigger: GATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTG...AGAGGAGGGGGACAATAGTATCTGGGTGTACTTACTCTGTTCTCTTAGTATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCATTCTCTCCACTCCTaGCCTTTTCAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FCQTLMALCGGPEQKAILHSLHS*PFQLAE
Trigger: CTCTGCCAGCTGAAAAGGCCAGGAGTGGAGAGAATG...AAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CCA 90 bp AGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGCTATACGCTCCTGGGAAGTGCTaGGAGGATTTAGGATTAGTT +
Preference number: 4 (lower is better)
Translates to: RKGSPHSGFMALKSSKLYAPGKC*EDLGLV
Trigger: AACTAATCCTAAATCCTCCCAGCACTTCCCAGGAGC...GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR TCA 90 bp TTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: FCQTLMALCGGPEQKAILEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...AAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp GTCACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTTGGCTCCAAAGCCTTCTGGGTTTATGGCCTTaGAGTCGAGCAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: VTELDSDETSWSTWLQSLLGLWP*SRASYT
Trigger: AGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAG...AAGGCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp ATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGTGGGAGCACCTTTTTGTCAGACTCTaGTGGCTCTCTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: IQYIKCHSGEMNQVLWEHLFVRL*WLSVEV
Trigger: GACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAG...GTGCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp AAGGGTAGAACAGGTCAGATTCTCACCATAGGTCAGACCTTTAGGTCCCCAGAGGTTTCATGGCTTGACTaGAGTCACAGAATTAGACAG +
Preference number: 4 (lower is better)
Translates to: KGRTGQILTIGQTFRSPEVSWLD*SHRIRQ
Trigger: CTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAAC...CTCTGGGGACCTAAAGGTCTGACCTATGGTGAGAATCTGACCTGTTCTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR TCA 90 bp GCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGGTTTCATGGCTTGACTaGAGTCACAGAATTAGACAG +
Preference number: 4 (lower is better)
Translates to: ALCGGPEQKAILLPCRFRVSWLD*SHRIRQ
Trigger: CTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAAC...CCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp TGTATAAATGTACTTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATACTGCAGGCACAGACTaGAGTTTAACTGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CINVLCKLHGVPGPKLCHTAGTD*SLTVGP
Trigger: AGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGT...ATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAAGTACATTTATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp CTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACTCTCCGGTGCAGAACTaGCTAAAGTTCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LPCTLLILGNVTHITSDHSPVQN*LKFSAV
Trigger: GACGGCCGAGAACTTTAGGCAGTTCTGCACCGGAGA...GTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp GGAGGGATCAGCAATGGATTCACACCTGATGTTAGCCACAGCTGTGGGCAGGCTATACAGTATATTAAATaGCACAGTGGAGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: GGISNGFTPDVSHSCGQAIQYIK*HSGEMN
Trigger: GTTCATCTCTCCACTGTGGCATTTAATATACTGTAT...AGCCTGCCCACAGCTGTGGCTAACATCAGGTGTGAATCCATTGCTGATCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000678193.1
CDS-3UTR GCA 90 bp GTGCTGTGGGAGCACCCACTGTCTGGGCTTAGACCTGATTCAGTCTTTGTCTGGATACAGTATATTAAATaGCACAGTGGAGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: VLWEHPLSGLRPDSVFVWIQYIK*HSGEMN
Trigger: GTTCATCTCTCCACTGTGGCATTTAATATACTGTAT...CCAGACAAAGACTGAATCAGGTCTAAGCCCAGACAGTGGGTGCTCCCACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372550.6
ENST00000677312.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGTAAGCTGCATGGTGTaGCAGGACCTAAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: NKKQSFFLAGFGPRGKEKVSCMV*QDLSSV
Trigger: GACAGAGCTTAGGTCCTGGCACACCATGCAGCTTAC...TTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AAGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAATGTACTTTGTAAGCTaGATGGTGTGCCAGGACCTA +
Preference number: 4 (lower is better)
Translates to: KPLSFLSDSDGSLWRSRTMYFVS*MVCQDL
Trigger: TAGGTCCTGGCACACCATGCAGCTTACAAAGTACAT...TGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp CAGACCTTTAGGTCCCCAGAGCAAAGTTGGGCAGTAAATTACAAAAGAACCAGGGTACTGGCATCGTACTaGAGGCACAGACTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: QTFRSPEQSWAVNYKRTRVLASY*RHRLKF
Trigger: AAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTAC...CCTGGTTCTTTTGTAATTTACTGCCCAACTTTGCTCTGGGGACCTAAAGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR GCA 90 bp AGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTTCAAGCAATTCTCCTaGTTCAACCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RKGSPHSGFMALKSSKLYFKQFS*FNLLSS
Trigger: GCTACTCAGGAGGTTGAAGCAGGAGAATTGCTTGAA...GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR GCA 90 bp AGAGAACAGAGTAAGTACACCCAGATACTATTGTCCCCCTCCTCTTGCCATTCCCAATGCAAGCAGCTTTaGCTTTGTACTGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: REQSKYTQILLSPSSCHSQCKQL*LCTGLE
Trigger: TTCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTG...GGAATGGCAAGAGGAGGGGGACAATAGTATCTGGGTGTACTTACTCTGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CCA 90 bp GGCATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGGACCACTGTTCGCCATaGAAAGCAGGCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GIFVIQYIKCHSGEMNQVDHCSP*KAGLEL
Trigger: CAGCTCCAGGCCTGCTTTCCATGGCGAACAGTGGTC...CACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTATCACAAATATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372550.6
CDS-3UTR CCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGAGACCACTGTTCGCCATaGAAAGCAGGCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRDHCSP*KAGLEL
Trigger: CAGCTCCAGGCCTGCTTTCCATGGCGAACAGTGGTC...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAACTTCCTGGTCTACTTaGCTCCAAAGCCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KSNPSSLQVSVPEVKRKGTSWST*LQSLCP
Trigger: AGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGT...TCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp ATTCTCACCATAGGTCAGACCTTTAGGTCCCCAGAGCAAAGTTGGGCAGTAAATAGTGATGAGACTTCCTaGTCTACTTGGCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ILTIGQTFRSPEQSWAVNSDETS*STWLQS
Trigger: GCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACT...ATTTACTGCCCAACTTTGCTCTGGGGACCTAAAGGTCTGACCTATGGTGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR CCA 90 bp AAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTGATGAGACTTCCTaGTCTACTTGGCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KSNPSSLQVSVPEVKRKGSDETS*STWLQS
Trigger: GCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACT...TCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp GGAGACATCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCTACTTTTGGGACAATTaGGGAGGTTTGAAAATGTAC +
Preference number: 4 (lower is better)
Translates to: GDIFQFFVPLSAASMLPSYFWDN*GGLKMY
Trigger: GTACATTTTCAAACCTCCCCAATTGTCCCAAAAGTA...GCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGATGTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp GCTCAGAGAAGGAAAGTGACTACTCCAAGGCCATACACGGAGGAACTGGGCTCATACTTTTGGGACAATTaGGGAGGTTTGAAAATGTAC +
Preference number: 4 (lower is better)
Translates to: AQRRKVTTPRPYTEELGSYFWDN*GGLKMY
Trigger: GTACATTTTCAAACCTCCCCAATTGTCCCAAAAGTA...TGAGCCCAGTTCCTCCGTGTATGGCCTTGGAGTAGTCACTTTCCTTCTCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CAA 72 bp GACCTTTGGAAAGGGGAGTGGAATTGCAGGTGGGTATaGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: DLWKGEWNCRWV*SRGAFTLSVWC
Trigger: ACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAATTCCACTCCCCTTTCCAAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CAA 72 bp AAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTaGAAGTCGAGCAAGCTGATTCAGTCTTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: KRKGSPHSGFMA*KSSKLIQSLSG
Trigger: TCCAGACAAAGACTGAATCAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677900.1
CDS-3UTR TCA 90 bp AGGGAAGGCATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACGGGGTTAACAGGACTTaGATTTGCCACCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: REGIFVIQYIKCHSGEMNGVNRT*ICHRHG
Trigger: GCCATGGCGGTGGCAAATTCAAGTCCTGTTAACCCC...GTTCATCTCTCCACTGTGGCATTTAATATACTGTATCACAAATATGCCTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372550.6
CDS-3UTR TCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGAGGGGTTAACAGGACTTaGATTTGCCACCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRGVNRT*ICHRHG
Trigger: GCCATGGCGGTGGCAAATTCAAGTCCTGTTAACCCC...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677926.1
ENST00000678803.1
CDS-3UTR TCA 90 bp CTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTGGGGTTAACAGGACTTaGATTTGCCACCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LVLFSYLAMSLILLVITSGVNRT*ICHRHG
Trigger: GCCATGGCGGTGGCAAATTCAAGTCCTGTTAACCCC...AGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678038.1
ENST00000678803.1
CDS-3UTR TCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp GTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGGTTTCATGGCTTGACTaGAGTCACAGAATTAGACAG +
Preference number: 4 (lower is better)
Translates to: VKRKGSPHSGFMALKSSKVSWLD*SHRIRQ
Trigger: CTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAAC...CTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp TACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTGGGAATGTCTTACTTCTGGTCTCGAACTCCTaGGCTCAAGCTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: YLAMSLILLVITSGNVLLLVSNS*AQAICP
Trigger: AGGGCAGATAGCTTGAGCTCAGGAGTTCGAGACCAG...AAGTAAGACATTCCCAGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp CTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTCTGGTCTCGAACTCCTaGGCTCAAGCTATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LVLFSYLAMSLILLVITSLVSNS*AQAICP
Trigger: AGGGCAGATAGCTTGAGCTCAGGAGTTCGAGACCAG...AGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp CTGGAAGATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTTACAGTATTTCCATTTaGCAGATGAGGAAATGTGCT +
Preference number: 4 (lower is better)
Translates to: LEDARHSPMRPANMKSRPYSISI*QMRKCA
Trigger: AGCACATTTCCTCATCTGTCAAATGGAAATACTGTA...AGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp TCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGATACAGTATATTAAATaGCACAGTGGAGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: SLQVSVPEVKRKGSPHSGIQYIK*HSGEMN
Trigger: GTTCATCTCTCCACTGTGGCATTTAATATACTGTAT...CCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGAATGCGGCCAACTTCCTaGAATCAGCGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRMRPTS*NQRESV
Trigger: GACACTCTCCCGCTGATTGCAGGAAGTTGGCCGCAT...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678308.1
CDS-3UTR GCA 90 bp CGTGCCCGGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAAAACTATCTCATTTATTTaGCCTTCACAACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: RARPLPAILYTPNPLFPKTISFI*PSQLHA
Trigger: TGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGT...TTTTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCCGGGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR GCA 90 bp GGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGACTATCTCATTTATTTaGCCTTCACAACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: GGPEQKAILLPCRFRSQRTISFI*PSQLHA
Trigger: TGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGT...CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp ATTCTCACCATAGGTCAGACCTTTAGGTCCCCAGAGCAAAGTTGGGCAGTAAATATGTACTTTGTAAGCTaGATGGTGTGCCAGGACCTA +
Preference number: 4 (lower is better)
Translates to: ILTIGQTFRSPEQSWAVNMYFVS*MVCQDL
Trigger: TAGGTCCTGGCACACCATGCAGCTTACAAAGTACAT...ATTTACTGCCCAACTTTGCTCTGGGGACCTAAAGGTCTGACCTATGGTGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR GCA 90 bp ATACCAGGCACTATGTTAGTCAGCATGATCCTTGCTTCAACAAGTTCTCAGTCCAAACATGCCACACCTTaGTCCAGTGGACAATGGGTA +
Preference number: 4 (lower is better)
Translates to: IPGTMLVSMILASTSSQSKHATP*SSGQWV
Trigger: TACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTT...GGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AGCTCTGTCATACCAGGCACTATGTTAGTCAGCATGATCCTTGCTTCAACAAGTTGTGTAAGACTTGGCTaGAATGCAAGCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SSVIPGTMLVSMILASTSCVRLG*NASSFA
Trigger: GGCAAAGCTGCTTGCATTGCAGCCAAGTCTTACACA...ACTTGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTATGACAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CCA 90 bp AGGGAAGGCATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAGAAGTCGGGAGCGTaGGATTCCGGCGAACCTAAA +
Preference number: 4 (lower is better)
Translates to: REGIFVIQYIKCHSGEMNQKSGA*DSGEPK
Trigger: TTTAGGTTCGCCGGAATCCCACGCTCCCGACTTCTG...GTTCATCTCTCCACTGTGGCATTTAATATACTGTATCACAAATATGCCTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372550.6
CDS-3UTR CCA 90 bp CTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTCAGAAGTCGGGAGCGTaGGATTCCGGCGAACCTAAA +
Preference number: 4 (lower is better)
Translates to: LVLFSYLAMSLILLVITSQKSGA*DSGEPK
Trigger: TTTAGGTTCGCCGGAATCCCACGCTCCCGACTTCTG...AGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678038.1
CDS-3UTR CCA 90 bp AGAAGAAGGGAAGGCATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RRREGIFVIQYIKCHSGEMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...CTCTCCACTGTGGCATTTAATATACTGTATCACAAATATGCCTTCCCTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372550.6
CDS-3UTR CCA 90 bp TGGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTAAGAGAACAGAGTAAGTACGGGAAGTCCACACTCTaGGTTTATGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: WVYGLEVEQAILREQSKYGKSTL*VYGLEV
Trigger: GACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCC...GTACTTACTCTGTTCTCTTAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp ACCTTTAGGTCCCCAGAGCAAAGTTGGGCAGTAAATTACAAAAGAACCAGGAAGTCTGATGGCTCTCTGTaGAGGTCCAGAACAAAAAGC +
Preference number: 4 (lower is better)
Translates to: TFRSPEQSWAVNYKRTRKSDGSL*RSRTKS
Trigger: GCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA...CTTCCTGGTTCTTTTGTAATTTACTGCCCAACTTTGCTCTGGGGACCTAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR CCA 90 bp GCTATACTAAGAGAACAGAGTAAGTACACCCAGATACTATTGTCCCCCTCCTCTTCTGATGGCTCTCTGTaGAGGTCCAGAACAAAAAGC +
Preference number: 4 (lower is better)
Translates to: AILREQSKYTQILLSPSSSDGSL*RSRTKS
Trigger: GCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA...AGAGGAGGGGGACAATAGTATCTGGGTGTACTTACTCTGTTCTCTTAGTATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCAGAGTTACTCAGGCCTaGAGCCAGGTCTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: PCTLLILGNVTHITSDHLRVTQA*SQVFLG
Trigger: CCCTAGAAAGACCTGGCTCCAGGCCTGAGTAACTCT...GAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTGAGAGGCAATGGAAATaGGTGAGGAGGCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RWVLSRGAFTLSVWCESFERQWK*VRRQEG
Trigger: CCCTTCTTGCCTCCTCACCCATTTCCATTGCCTCTC...AAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCGAGAGGCAATGGAAATaGGTGAGGAGGCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLVLFSYLAMSLILLVITERQWK*VRRQEG
Trigger: CCCTTCTTGCCTCCTCACCCATTTCCATTGCCTCTC...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TATGTTAGTCAGCATGATCCTTGCTTCAACAAGTTCTCAGTCCAGAGAAAAACAGAGGTCAGTGTGGGATaGGGAGGTAAGCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: YVSQHDPCFNKFSVQRKTEVSVG*GGKHLR
Trigger: TCTGAGGTGCTTACCTCCCCATCCCACACTGACCTC...TGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR TCA 90 bp GGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATATGCCACAGTGGAGAGATaGACCAAGTGCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GQAYYLIYLPFTTPCIIYATVER*TKCCGS
Trigger: GCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGC...ATATATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp GGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGACTATCTCATTTATTTaGCCTTCACAACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: GSLWRSRTKSNPSSLQVSTISFI*PSQLHA
Trigger: TGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGT...CGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR GCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTCGAGGCCTGGAATTaGAGTATCAGTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKVEAWN*SISSDE
Trigger: CTCATCAGAACTGATACTGCAATTCCAGGCCTCGAC...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp TGGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTAAGAGAACAGAGTAAGTACGTACTGGCATCGTACTaGAGGCACAGACTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: WVYGLEVEQAILREQSKYVLASY*RHRLKF
Trigger: AAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTAC...GTACTTACTCTGTTCTCTTAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp CTAAGCTCTGTCATACCAGGCACTATGTTAGTCAGCATGATCCTTGCTTCAACATTCAAGCAATTCTCCTaGTTCAACCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LSSVIPGTMLVSMILASTFKQFS*FNLLSS
Trigger: GCTACTCAGGAGGTTGAAGCAGGAGAATTGCTTGAA...TGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTATGACAGAGCTTAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR GCA 90 bp ACAGGTCAGATTCTCACCATAGGTCAGACCTTTAGGTCCCCAGAGCAAAGTTGGGTATTATCCACAGTCTaGTATATATCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TGQILTIGQTFRSPEQSWVLSTV*YISLQR
Trigger: TCTCTGCAGTGATATATAGCAGACTGTGGATAATAC...CCAACTTTGCTCTGGGGACCTAAAGGTCTGACCTATGGTGAGAATCTGACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CCA 90 bp ACATTTATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCACTGTGGGCAGGCTCCTaGGAAGTGCTGATTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TFMVKHTISFICPSQLHALWAGS*EVLIQS
Trigger: AGACTGAATCAGCACTTCCCAGGAGCCTGCCCACAG...TGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676675.1
CDS-3UTR CCA 90 bp GATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTTACTTTTGGGACAATTaGGGAGGTTTGAAAATGTAC +
Preference number: 4 (lower is better)
Translates to: DARHSPMRPANMKSRPGIYFWDN*GGLKMY
Trigger: GTACATTTTCAAACCTCCCCAATTGTCCCAAAAGTA...AATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCACTACCCCTCACCTaGCTGGAAGTGATGGATTTC +
Preference number: 4 (lower is better)
Translates to: SLVLFSYLAMSLILLVITSLPLT*LEVMDF
Trigger: GAAATCCATCACTTCCAGCCAGGTGAGGGGTAGTGA...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTTCACTACCCCTCACCTaGCTGGAAGTGATGGATTTC +
Preference number: 4 (lower is better)
Translates to: RWVLSRGAFTLSVWCESFSLPLT*LEVMDF
Trigger: GAAATCCATCACTTCCAGCCAGGTGAGGGGTAGTGA...AAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp CCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCGAAGAAGGGAAGGCCTaGCTGGAAGTGATGGATTTC +
Preference number: 4 (lower is better)
Translates to: PCTLLILGNVTHITSDHLEEGKA*LEVMDF
Trigger: GAAATCCATCACTTCCAGCCAGGCCTTCCCTTCTTC...GAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678038.1
CDS-3UTR TCA 90 bp TGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATAGGGGTTAACAGGACTTaGATTTGCCACCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: WSSILSHLFALHNSMHYIGVNRT*ICHRHG
Trigger: GCCATGGCGGTGGCAAATTCAAGTCCTGTTAACCCC...TATATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR TCA 90 bp AGAAGGGAAGGCATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: RREGIFVIQYIKCHSGEMEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...CATCTCTCCACTGTGGCATTTAATATACTGTATCACAAATATGCCTTCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372550.6
CDS-3UTR TCA 90 bp GTGATGGATTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTAGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: VMDFSLVLFSYLAMSLILEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...TAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAATCCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTGGGAATGTCTTACTTGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: YLAMSLILLVITSGNVLLEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...AAGTAAGACATTCCCAGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TATGTTAGTCAGCATGATCCTTGCTTCAACAAGTTCTCAGTCCAGAGAAAAACAGAACCCCATCTTTCCTaGATTCTCCGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: YVSQHDPCFNKFSVQRKTEPHLS*ILRCRT
Trigger: AGTTCTGCACCGGAGAATTCAGGAAAGATGGGGTTC...TGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp TTAGTCAGCATGATCCTTGCTTCAACAAGTTCTCAGTCCAGAGAAAAACAGACTCTGGGTTTATGGCCTTaGAGTCGAGCAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: LVSMILASTSSQSREKQTLGLWP*SRASYT
Trigger: AGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAG...AGTCTGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR TCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAACAAGAAGTCTGCAACTaGTTCAGTCTTTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKQEVCN*FSLCLD
Trigger: GTCCAGACAAAGACTGAATCAGTTGCAGACTTCTTG...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677926.1
CDS-3UTR GCA 90 bp CTTGCTTCAACAAGTTCTCAGTCCAGAGAAAAACAGACTTACATATTTGTGATATCTCCGGTGCAGAACTaGCTAAAGTTCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LASTSSQSREKQTYIFVISPVQN*LKFSAV
Trigger: GACGGCCGAGAACTTTAGGCAGTTCTGCACCGGAGA...TATCACAAATATGTAAGTCTGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGACTATCTCATTTATTTaGCCTTCACAACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: KQSFFLAGFGPRGKEKGKTISFI*PSQLHA
Trigger: TGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGT...CTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATAATGAACCAAGTGCTGTaGGAGCACCCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: YGQAYYLIYLPFTTPCIIMNQVL*EHPLSG
Trigger: CCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCAT...TATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp AAGGCCATACACGGAGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KAIHGGTGLNLMSSRLKFTSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...GAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCTCCGTGTATGGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp CATTTATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATGTGGACAATGGGTACTaGCATCGTACTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: HLWSSILSHLFALHNSMHVDNGY*HRTAGT
Trigger: TGTGCCTGCAGTACGATGCCAGTACCCATTGTCCAC...ATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR CCA 90 bp TGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATAACATGGAGGTCAGTGTaGGATGGGGAGGTAAGCACC +
Preference number: 4 (lower is better)
Translates to: WSSILSHLFALHNSMHYITWRSV*DGEVST
Trigger: GGTGCTTACCTCCCCATCCCACACTGACCTCCATGT...TATATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR CCA 90 bp ATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGAGGGAAGGCCTACAATaGCAGAGACATGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: IFVIQYIKCHSGEMNQVLREGLQ*QRHGGQ
Trigger: CTGACCTCCATGTCTCTGCCATTGTAGGCCTTCCCT...CAGCACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTATCACAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR TCA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAAAAGACACACTTACCTaGTTCAGTCTTTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKKDTLT*FSLCLD
Trigger: GTCCAGACAAAGACTGAATCAGGTAAGTGTGTCTTT...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp GGCCATACACGGAGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCTTCTGTTACAAACTGCCTaGGTAGTTTTCACATTGATA +
Preference number: 4 (lower is better)
Translates to: GHTRRNWAQSHVFKTKVLLLQTA*VVFTLI
Trigger: TATCAATGTGAAAACTACTCAGGCAGTTTGTAACAG...AAGAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCTCCGTGTATGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp AAGGCCATACACGGAGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCCTGTTACAAACTGCCTaGGTAGTTTTCACATTGATA +
Preference number: 4 (lower is better)
Translates to: KAIHGGTGLNLMSSRLKFLLQTA*VVFTLI
Trigger: TATCAATGTGAAAACTACTCAGGCAGTTTGTAACAG...GAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCTCCGTGTATGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp CTTGCTTCAACAAGTTCTCAGTCCAGAGAAAAACAGACTTACATATTTGTGATAGCCATTCCTCAAACATaGCACACCTTGCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LASTSSQSREKQTYIFVIAIPQT*HTLLQW
Trigger: CCACTGGAGCAAGGTGTGGCATGTTTGAGGAATGGC...TATCACAAATATGTAAGTCTGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp TTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTTCCCATATGAGACAATaGTCCCAGCTATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FCQTLMALCGGPEQKAILSHMRQ*SQLFSF
Trigger: AAAAGAGAATAGCTGGGAGCATTGTCTCATATGGGA...AAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR GCA 90 bp AGCTCTGTCATACCAGGCACTATGTTAGTCAGCATGATCCTTGCTTCAACAAGTTCCCATATGAGACAATaGTCCCAGCTATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SSVIPGTMLVSMILASTSSHMRQ*SQLFSF
Trigger: AAAAGAGAATAGCTGGGAGCATTGTCTCATATGGGA...ACTTGTTGAAGCAAGGATCATGCTGACTAACATAGTGCCTGGTATGACAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR GCA 90 bp TTAGTCAGCATGATCCTTGCTTCAACAAGTTCTCAGTCCAGAGAAAAACAGACTAAGACTTGGCTGCAATaGAAGCAGCTTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LVSMILASTSSQSREKQTKTWLQ*KQLCLC
Trigger: ACAAAGGCAAAGCTGCTTGCATTGCAGCCAAGTCTT...AGTCTGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CCA 90 bp TATGTTAGTCAGCATGATCCTTGCTTCAACAAGTTCTCAGTCCAGAGAAAAACAACTTCCTGGTCTACTTaGCTCCAAAGCCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: YVSQHDPCFNKFSVQRKTTSWST*LQSLCP
Trigger: AGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGT...TGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTGGGAATGTCTTACTTCTTTGGAAAGGGGAGTaGAATTGCAGGTGGGTATTG +
Preference number: 4 (lower is better)
Translates to: YLAMSLILLVITSGNVLLLWKGE*NCRWVL
Trigger: CAATACCCACCTGCAATTCCACTCCCCTTTCCAAAG...AAGTAAGACATTCCCAGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGACTTTGGAAAGGGGAGTaGAATTGCAGGTGGGTATTG +
Preference number: 4 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRLWKGE*NCRWVL
Trigger: CAATACCCACCTGCAATTCCACTCCCCTTTCCAAAG...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp CTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTAGGGGGACTACTGAATaGAACTGTAGTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LVLFSYLAMSLILLVITSRGTTE*NCSLRV
Trigger: CACTCTCAGACTACAGTTCCATTCAGTAGTCCCCCT...AGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATTCACTACCCCTCACCTaGCTGGAAGTGATGGATTTC +
Preference number: 4 (lower is better)
Translates to: FLPCTLLILGNVTHITSDSLPLT*LEVMDF
Trigger: GAAATCCATCACTTCCAGCCAGGTGAGGGGTAGTGA...ATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp CTAACATTTATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATAGGGAAGGCCTACAATaGCAGAGACATGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LTFMVKHTISFICPSQLHREGLQ*QRHGGQ
Trigger: CTGACCTCCATGTCTCTGCCATTGTAGGCCTTCCCT...ATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATAAATGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676675.1
ENST00000677312.1
CDS-3UTR TCA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCAATGGAACTGTAGTCTaGGAGTGCTGTTACAAACTG +
Preference number: 4 (lower is better)
Translates to: SLVLFSYLAMSLILLVITNGTVV*ECCYKL
Trigger: CAGTTTGTAACAGCACTCTCAGACTACAGTTCCATT...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCATTACGGGTAAGAAATaGGTCCATGTAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FSLVLFSYLAMSLILLVIITGKK*VHVGWK
Trigger: CTTCCAGCCTACATGGACTCATTTCTTACCCGTAAT...GATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp ATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGTGGGAGCACACTATCTCATTTATTTaGCCTTCACAACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: IQYIKCHSGEMNQVLWEHTISFI*PSQLHA
Trigger: TGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGT...GTGCTCCCACAGCACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp TTCCTTGCTGAAATACTTAGGGGTAAAGTGTCAAGAAGTCTGCAACTTTCAAATGTCGAGGCCTGGAATTaGAGTATCAGTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: FLAEILRGKVSRSLQLSNVEAWN*SISSDE
Trigger: CTCATCAGAACTGATACTGCAATTCCAGGCCTCGAC...ATTTGAAAGTTGCAGACTTCTTGACACTTTACCCCTAAGTATTTCAGCAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp ATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGAAACATGCCACACCTTaGTCCAGTGGACAATGGGTA +
Preference number: 4 (lower is better)
Translates to: IFVIQYIKCHSGEMNQVLKHATP*SSGQWV
Trigger: TACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTT...CAGCACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTATCACAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp ATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGAGTGATGAGACTTCCTaGTCTACTTGGCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: IFVIQYIKCHSGEMNQVLSDETS*STWLQS
Trigger: GCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACT...CAGCACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTATCACAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp CCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTATGAAGTCGAGGCCTaGAATTGCAGTATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PCTLLILGNVTHITSDHLYEVEA*NCSISS
Trigger: AGAACTGATACTGCAATTCCAGGCCTCGACTTCATA...GAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTTATGAAGTCGAGGCCTaGAATTGCAGTATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RWVLSRGAFTLSVWCESFYEVEA*NCSISS
Trigger: AGAACTGATACTGCAATTCCAGGCCTCGACTTCATA...AAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TTTATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATGGACTGGAATGGACTaGAGCCAGACATTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FMVKHTISFICPSQLHALWTGMD*SQTFSP
Trigger: TGGAGAGAATGTCTGGCTCCAGTCCATTCCAGTCCA...TAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR TCA 90 bp ATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATCTGGGTTTATGGCCTTaGAGTCGAGCAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: MVKHTISFICPSQLHALYLGLWP*SRASYT
Trigger: AGTATAGCTTGCTCGACTTCAAGGCCATAAACCCAG...ATATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp TTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCAAAGACACACTTACCTaGTTCAGTCTTTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: FSLVLFSYLAMSLILLVIKDTLT*FSLCLD
Trigger: GTCCAGACAAAGACTGAATCAGGTAAGTGTGTCTTT...GATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCAATGGAACTGTAGTCTaGGAGTGCTGTTACAAACTG +
Preference number: 4 (lower is better)
Translates to: FSLVLFSYLAMSLILLVINGTVV*ECCYKL
Trigger: CAGTTTGTAACAGCACTCTCAGACTACAGTTCCATT...GATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp GTGATGGATTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTAAATGGAACTGTAGTCTaGGAGTGCTGTTACAAACTG +
Preference number: 4 (lower is better)
Translates to: VMDFSLVLFSYLAMSLILNGTVV*ECCYKL
Trigger: CAGTTTGTAACAGCACTCTCAGACTACAGTTCCATT...TAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAATCCATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATATTACGGGTAAGAAATaGGTCCATGTAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FLPCTLLILGNVTHITSDITGKK*VHVGWK
Trigger: CTTCCAGCCTACATGGACTCATTTCTTACCCGTAAT...ATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp GTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGCTGTGGGAGATACAGTATATTAAATaGCACAGTGGAGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: VIQYIKCHSGEMNQVLWEIQYIK*HSGEMN
Trigger: GTTCATCTCTCCACTGTGGCATTTAATATACTGTAT...CTCCCACAGCACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372550.6
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR GCA 90 bp AGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCTTTCCACTAGACCAAAGTGTCAAGAAGTCTaGAACTTTCAAATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RNWAQSHVFKTKVLSTRPKCQEV*NFQMGK
Trigger: CTTTCCCATTTGAAAGTTGCAGACTTCTTGACACTT...TGGTCTAGTGGAAAGAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp TGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATAAAACATGCCACACCTTaGTCCAGTGGACAATGGGTA +
Preference number: 4 (lower is better)
Translates to: WSSILSHLFALHNSMHYIKHATP*SSGQWV
Trigger: TACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTT...TATATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TTTATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTAACTTCCTGGTCTACTTaGCTCCAAAGCCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: FMVKHTISFICPSQLHALTSWST*LQSLCP
Trigger: AGGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGT...TAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CCA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SLVLFSYLAMSLILLVITTSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGATTTCCATTTGACAGATaGGGAAATGTGCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRFPFDR*GNVLRE
Trigger: TTCTCTGAGCACATTTCCTCATCTGTCAAATGGAAA...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTGGGAATGTCTTACTTTTTCCATTTGACAGATaGGGAAATGTGCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: YLAMSLILLVITSGNVLLFPFDR*GNVLRE
Trigger: TTCTCTGAGCACATTTCCTCATCTGTCAAATGGAAA...AAGTAAGACATTCCCAGAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTACAGTATTTCCATTTaGCAGATGAGGAAATGTGCT +
Preference number: 4 (lower is better)
Translates to: SLVLFSYLAMSLILLVITYSISI*QMRKCA
Trigger: AGCACATTTCCTCATCTGTCAAATGGAAATACTGTA...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCATGTCTTACTTTCCATaGGCTCCTGATTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FSLVLFSYLAMSLILLVIMSYFP*APDSVF
Trigger: AAAGACTGAATCAGGAGCTCATGGAAAGTAAGACAT...GATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677219.1
ENST00000678038.1
CDS-3UTR GCA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCAAGTGTCAAGAAGTCTaGAACTTTCAAATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLVLFSYLAMSLILLVITKCQEV*NFQMGK
Trigger: CTTTCCCATTTGAAAGTTGCAGACTTCTTGACACTT...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp AGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTAAGTGTCAAGAAGTCTaGAACTTTCAAATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RWVLSRGAFTLSVWCESFKCQEV*NFQMGK
Trigger: CTTTCCCATTTGAAAGTTGCAGACTTCTTGACACTT...AAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTTACTTTTGGGACAATTaGGGAGGTTTGAAAATGTAC +
Preference number: 4 (lower is better)
Translates to: RWVLSRGAFTLSVWCESFYFWDN*GGLKMY
Trigger: GTACATTTTCAAACCTCCCCAATTGTCCCAAAAGTA...AAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp GTGATGGATTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTAACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VMDFSLVLFSYLAMSLILTSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...TAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAATCCATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp GGCATATTTGTGATACAGTATATTAAATGCCACAGTGGAGAGATGAACCAAGTGGGGAAGGCATATTTGTaGTACAGTATATTAAATGCC +
Preference number: 4 (lower is better)
Translates to: GIFVIQYIKCHSGEMNQVGKAYL*YSILNA
Trigger: GGCATTTAATATACTGTATCACAAATATGCCTTCCC...CACTTGGTTCATCTCTCCACTGTGGCATTTAATATACTGTATCACAAATATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372550.6
CDS-3UTR TCA 90 bp GGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATATGTTTCATGGCTTGACTaGAGTCACAGAATTAGACAG +
Preference number: 4 (lower is better)
Translates to: GQAYYLIYLPFTTPCIIYVSWLD*SHRIRQ
Trigger: CTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAAC...ATATATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR TCA 90 bp TTCCTTGCTGAAATACTTAGGGGTAAAGTGTCAAGAAGTCTGCAACTTTCAAATTTTCCATTTGACAGATaGGGAAATGTGCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FLAEILRGKVSRSLQLSNFPFDR*GNVLRE
Trigger: TTCTCTGAGCACATTTCCTCATCTGTCAAATGGAAA...ATTTGAAAGTTGCAGACTTCTTGACACTTTACCCCTAAGTATTTCAGCAAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR TCA 90 bp TTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCCTGTTACAAACTGCCTaGGTAGTTTTCACATTGATA +
Preference number: 4 (lower is better)
Translates to: FSLVLFSYLAMSLILLVILLQTA*VVFTLI
Trigger: TATCAATGTGAAAACTACTCAGGCAGTTTGTAACAG...GATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR GCA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGAAAGTGTCAAGAAGTCTaGAACTTTCAAATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRKCQEV*NFQMGK
Trigger: CTTTCCCATTTGAAAGTTGCAGACTTCTTGACACTT...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTTACTCTTCTCATACTTaGCAATGTCACTCATATTAC +
Preference number: 4 (lower is better)
Translates to: RWVLSRGAFTLSVWCESFYSSHT*QCHSYY
Trigger: GTAATATGAGTGACATTGCCAAGTATGAGAAGAGTA...AAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTACTCTTCTCATACTTaGCAATGTCACTCATATTAC +
Preference number: 4 (lower is better)
Translates to: SLVLFSYLAMSLILLVITYSSHT*QCHSYY
Trigger: GTAATATGAGTGACATTGCCAAGTATGAGAAGAGTA...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATTACTTTTGGGACAATTaGGGAGGTTTGAAAATGTAC +
Preference number: 4 (lower is better)
Translates to: FLPCTLLILGNVTHITSDYFWDN*GGLKMY
Trigger: GTACATTTTCAAACCTCCCCAATTGTCCCAAAAGTA...ATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp AGTGCTGTTACAAACTGCCTGAGTAGTTTTCACATTGATACTTTGTACATTACAACTAGTGATCACCTCTaGGAATGTCTTACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SAVTNCLSSFHIDTLYITTSDHL*ECLTFH
Trigger: ATGGAAAGTAAGACATTCCCAGAGGTGATCACTAGT...TGTAATGTACAAAGTATCAATGTGAAAACTACTCAGGCAGTTTGTAACAGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCTACTCTTCTCATACTTaGCAATGTCACTCATATTAC +
Preference number: 4 (lower is better)
Translates to: FSLVLFSYLAMSLILLVIYSSHT*QCHSYY
Trigger: GTAATATGAGTGACATTGCCAAGTATGAGAAGAGTA...GATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CCA 90 bp TTCCTTGCTGAAATACTTAGGGGTAAAGTGTCAAGAAGTCTGCAACTTTCAAATTACTCTTCTCATACTTaGCAATGTCACTCATATTAC +
Preference number: 4 (lower is better)
Translates to: FLAEILRGKVSRSLQLSNYSSHT*QCHSYY
Trigger: GTAATATGAGTGACATTGCCAAGTATGAGAAGAGTA...ATTTGAAAGTTGCAGACTTCTTGACACTTTACCCCTAAGTATTTCAGCAAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
3UTR CAA 72 bp AAATCTTGCCAACACATCCAGATCTACCTCTTTATTTaGTTAAGGCTGTATAGTATTCCACTGAAGAGAATG +
Preference number: 4 (lower is better)
Translates to: KSCQHIQIYLFI*LRLYSIPLKRM
Trigger: CATTCTCTTCAGTGGAATACTATACAGCCTTAACAAAATAAAGAGGTAGATCTGGATGTGTTGGCAAGATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS TCA 90 bp GAAGGCCCAGTCCAAGACCATGAGGGCTTCACGGAGCAGGGGGCATaGTGGGCTGACCCACCACCCTGCCGCTCGGTATCTCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: EGPVQDHEGFTEQGA*WADPPPCRSVSPTS
Trigger: GGAGGTGGGAGATACCGAGCGGCAGGGTGGTGGGTCAGCCCATCATGCCCCCTGCTCCGTGAAGCCCTCATGGTCTTGGACTGGGCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372549.1
ENST00000677356.1
ENST00000678076.1
ENST00000678308.1
ENST00000679245.1
CDS GCA 90 bp CACTTTCTGGCTGGCTTCCCGAGTCCGCTCTCTCTGGGTGAGTTCTaGCTGCCTAGCCCCGAGCAGTTTCCCTTCGGCGCAGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: HFLAGFPSPLSLGEF*LPSPEQFPFGAGVG
Trigger: GCCCACACCTGCGCCGAAGGGAAACTGCTCGGGGCTAGGCAGGCAGAACTCACCCAGAGAGAGCGGACTCGGGAAGCCAGCCAGAAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440068.6
CDS GCA 90 bp CCAGCAATCATTCAAGGCCAGCAGGTGGTTCACCGATACCCTCACTaGAGCCCCAGAACACCCCTCTGGAGCAGGCAAAGAAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: PAIIQGQQVVHRYPH*SPRTPLWSRQRSQT
Trigger: TGTTTGACTTCTTTGCCTGCTCCAGAGGGGTGTTCTGGGGCTGCAGTGAGGGTATCGGTGAACCACCTGCTGGCCTTGAATGATTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372549.1
ENST00000436387.1
ENST00000677307.1
CDS-3UTR CAA 90 bp TGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACAGGACTTCCTGGTCTACTaGGCTCCAAAGCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: CHTLLQWTMGTGIVLQAQDFLVY*APKPLS
Trigger: GGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGTC...CTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CAA 90 bp AAGGCCATACACGGAGGAACTGGGCTCAATCTCATGTCTTCAAGACTAAAGTTCCGGGATCTCACCAGGTaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: KAIHGGTGLNLMSSRLKFRDLTR*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAACCTGGTGAGATCCCG...GAACTTTAGTCTTGAAGACATGAGATTGAGCCCAGTTCCTCCGTGTATGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678076.1
ENST00000678803.1
CDS-3UTR CAA 90 bp GCCCGGCCACTCCCAGCTATTCTCTACACTCCTAATCCTCTTTTCCCAAAAGGGCAAACATGCCACACCTaGCTCCAGTGGACAATGGGT +
Preference number: 5 (lower is better)
Translates to: ARPLPAILYTPNPLFPKGQTCHT*LQWTMG
Trigger: ACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTG...CCCTTTTGGGAAAAGAGGATTAGGAGTGTAGAGAATAGCTGGGAGTGGCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR CAA 90 bp GCTCCAAAGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCGACTTCCTGGTCTACTaGGCTCCAAAGCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: APKPLSFLSDSDGSLWRSDFLVY*APKPLS
Trigger: GGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGTC...GGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCTTTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACAGACTGAAGTTCAAACATGCCACACCTaGCTCCAGTGGACAATGGGT +
Preference number: 5 (lower is better)
Translates to: LLQWTMGTGIVLQAQTEVQTCHT*LQWTMG
Trigger: ACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTG...AACTTCAGTCTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CAA 90 bp GAGATGAACCAAGTGCTGTGGGAGCACCCACTGTCTGGGCTTAGACCTGATTCATACACCCAGATACTATaGTCCCCCTCCTCTTGCCAT +
Preference number: 5 (lower is better)
Translates to: EMNQVLWEHPLSGLRPDSYTQIL*SPSSCH
Trigger: ATGGCAAGAGGAGGGGGACAATAGTATCTGGGTGTA...TGAATCAGGTCTAAGCCCAGACAGTGGGTGCTCCCACAGCACTTGGTTCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677312.1
ENST00000679245.1
CDS-3UTR CAA 90 bp GCCAGACATTCTCTCCACTCCTGGCCTTTTCAGCTGGCAGAGCTTCTGATTCAGTACACCCAGATACTATaGTCCCCCTCCTCTTGCCAT +
Preference number: 5 (lower is better)
Translates to: ARHSLHSWPFQLAELLIQYTQIL*SPSSCH
Trigger: ATGGCAAGAGGAGGGGGACAATAGTATCTGGGTGTA...CTGAATCAGAAGCTCTGCCAGCTGAAAAGGCCAGGAGTGGAGAGAATGTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CAA 90 bp GTACTGGCATCGTACTGCAGGCACAGACTGAAGTTTAACTGTGGGCCCTCAAGCTCTGGGTTTATGGCCTaGAAGTCGAGCAAGCTATAC +
Preference number: 5 (lower is better)
Translates to: VLASYCRHRLKFNCGPSSSGFMA*KSSKLY
Trigger: GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGA...GCTTGAGGGCCCACAGTTAAACTTCAGTCTGTGCCTGCAGTACGATGCCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTAGCAATCCTTCTTCCTaGCAGGTTTCGGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LQVSVPEVKRKGSPHSGFSNPSS*QVSVPE
Trigger: CTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCT...AAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp GCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGAGCAATCCTTCTTCCTaGCAGGTTTCGGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: ALCGGPEQKAILLPCRFRSNPSS*QVSVPE
Trigger: CTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCT...CCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TGCCACACCTTGCTCCAGTGGACAATGGGTACTGGCATCGTACTGCAGGCACAGAAGGGGTTTCATGGCTaGACTGAAGTCACAGAATTA +
Preference number: 5 (lower is better)
Translates to: CHTLLQWTMGTGIVLQAQKGFHG*TEVTEL
Trigger: TAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTT...CTGTGCCTGCAGTACGATGCCAGTACCCATTGTCCACTGGAGCAAGGTGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CAA 90 bp CTGGAAGATGCAAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGAAAGGGGAGTGGAATaGCAGGTGGGTATTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LEDARHSPMRPANMKSRPERGVE*QVGIVK
Trigger: CTTGACAATACCCACCTGCAATTCCACTCCCCTTTC...AGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTTGCATCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp ATTGCAGGTGGGTATTGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAACGGGATCTCACCAGGTaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: IAGGYCQEGLSLYLFGVKRDLTR*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAACCTGGTGAGATCCCG...TTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACAATACCCACCTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678803.1
CDS-3UTR CAA 90 bp AAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGAGCAATCCTTCTTCCTaGCAGGTTTCGGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: KQSFFLAGFGPRGKEKGKSNPSS*QVSVPE
Trigger: CTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCT...CTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp ACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGCTGATTCAGTCTTTGTCTGGAGCAATCCTTCTTCCTaGCAGGTTTCGGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TLWVYGLEVEQADSVFVWSNPSS*QVSVPE
Trigger: CTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCT...CCAGACAAAGACTGAATCAGCTTGCTCGACTTCAAGGCCATAAACCCAGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677900.1
CDS-3UTR CAA 90 bp CAAAGCCTTTGTCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAAAGCAATCCTTCTTCCTaGCAGGTTTCGGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: QSLCPFCQTLMALCGGPESNPSS*QVSVPE
Trigger: CTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCT...TTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGACAAAGGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp CTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTGACTTCCTGGTCTACTaGGCTCCAAAGCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: LSVEVQNKKQSFFLAGFGDFLVY*APKPLS
Trigger: GGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGTC...ACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp AATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCAGACTTCCTGGTCTACTaGGCTCCAAAGCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: NPSSLQVSVPEVKRKGSPDFLVY*APKPLS
Trigger: GGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGTC...TGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp AAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGGACTTCCTGGTCTACTaGGCTCCAAAGCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: KQSFFLAGFGPRGKEKGKDFLVY*APKPLS
Trigger: GGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGTC...CTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp AAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTGCAGTGAAAGGGGAGTGGAATaGCAGGTGGGTATTGTCAAG +
Preference number: 5 (lower is better)
Translates to: KAFTYEASEYEVEAWNCSERGVE*QVGIVK
Trigger: CTTGACAATACCCACCTGCAATTCCACTCCCCTTTC...ACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp GTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGAGCAAGCAAACATGCCACACCTaGCTCCAGTGGACAATGGGT +
Preference number: 5 (lower is better)
Translates to: VKRKGSPHSGFMALKSSKQTCHT*LQWTMG
Trigger: ACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTG...CTTGCTCGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CAA 90 bp GGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTCTGGGTTTATGGCCTaGAAGTCGAGCAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: GGPEQKAILLPCRFRSQRSGFMA*KSSKLI
Trigger: AATCAGCTTGCTCGACTTCAAGGCCATAAACCCAGA...CCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677900.1
CDS-3UTR CAA 90 bp CCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGGCCTTGAAGTCGTCTGGGTTTATGGCCTaGAAGTCGAGCAAGCTATAC +
Preference number: 5 (lower is better)
Translates to: PEVKRKGSPHSGFMALKSSGFMA*KSSKLY
Trigger: GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGA...CGACTTCAAGGCCATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCCGGGATCTCACCAGGTaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: FSLVLFSYLAMSLILLVIRDLTR*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAACCTGGTGAGATCCCG...GATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678803.1
CDS-3UTR CAA 90 bp AAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGCAAGCAGCTTTGCCTTaGTACTGGACTGGAATGGAC +
Preference number: 5 (lower is better)
Translates to: KQSFFLAGFGPRGKEKGKQAALP*YWTGMD
Trigger: GTCCATTCCAGTCCAGTACAAAGGCAAAGCTGCTTG...CTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CAA 90 bp TTGACTGAAGTCACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTTGGCTCAGCAATCCTTCTTCCTaGCAGGTTTCGGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LTEVTELDSDETSWSTWLSNPSS*QVSVPE
Trigger: CTCTGGGACCGAAACCTGCAAGGAAGAAGGATTGCT...GAGCCAAGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGTGACTTCAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp GGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGTTGGCTCCAAAGCCTTaGTCCTTTTTGTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: GSLWRSRTKSNPSSLQVSLAPKP*SFLSDS
Trigger: AGAGTCTGACAAAAAGGACAAAGGCTTTGGAGCCAA...CGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTTTGGCTCCAAAGCCTTaGTCCTTTTTGTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: SSLQVSVPEVKRKGSPHSLAPKP*SFLSDS
Trigger: AGAGTCTGACAAAAAGGACAAAGGCTTTGGAGCCAA...AGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp CTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTCCTTGGCTCCAAAGCCTTaGTCCTTTTTGTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: LCGGPEQKAILLPCRFRSLAPKP*SFLSDS
Trigger: AGAGTCTGACAAAAAGGACAAAGGCTTTGGAGCCAA...GGACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTGACTTCCTGGTCTACTaGGCTCCAAAGCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: FLSDSDGSLWRSRTKSNPDFLVY*APKPLS
Trigger: GGACAAAGGCTTTGGAGCCAAGTAGACCAGGAAGTC...AGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp GCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTATGTCCCCAGAGCAAAGTaGGGCAGTAAATTACAAAAG +
Preference number: 5 (lower is better)
Translates to: AGFGPRGKEKGKSTLWVYVPRAK*GSKLQK
Trigger: CTTTTGTAATTTACTGCCCAACTTTGCTCTGGGGAC...ATAAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR CAA 90 bp GCTCAGAGAAGGAAAGTGACTACTCCAAGGCCATACACGGAGGAACTGGGCTCACTACAAAAGTTACTTTaGGGACAATTGGGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: AQRRKVTTPRPYTEELGSLQKLL*GQLGRF
Trigger: AAACCTCCCCAATTGTCCCAAAAGTAACTTTTGTAG...TGAGCCCAGTTCCTCCGTGTATGGCCTTGGAGTAGTCACTTTCCTTCTCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp TCTTTCAATTCTTTGTCCCCCTCTCTGCAGCTAGCATGCTGCCCAGCGCAGAGCGTACTCTTCTCATACTaGGCAATGTCACTCATATTA +
Preference number: 5 (lower is better)
Translates to: SFNSLSPSLQLACCPAQSVLFSY*AMSLIL
Trigger: TAATATGAGTGACATTGCCAAGTATGAGAAGAGTAC...GCTCTGCGCTGGGCAGCATGCTAGCTGCAGAGAGGGGGACAAAGAATTGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS TCA 90 bp TTGGAACCCCATCTTTCCTATAACCGAAAAGAAAGAGACTTGGAGTaGCAGCAGGTAGCACAAGGCCTTTCCAGTTTACCATGCACTGGA +
Preference number: 5 (lower is better)
Translates to: LEPHLSYNRKERDLE*QQVAQGLSSLPCTG
Trigger: TCCAGTGCATGGTAAACTGGAAAGGCCTTGTGCTACCTGCTGTCACTCCAAGTCTCTTTCTTTTCGGTTATAGGAAAGATGGGGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436387.1
CDS-3UTR CAA 90 bp GTCACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTTGGCTCCAAAGCCTTTCTGGGTTTATGGCCTaGAAGTCGAGCAAGCTATAC +
Preference number: 5 (lower is better)
Translates to: VTELDSDETSWSTWLQSLSGFMA*KSSKLY
Trigger: GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGA...AAGGCTTTGGAGCCAAGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp GGTCCCAAGGGGTTTCATGGCTTGACTGAAGTCACAGAATTAGACAGTGATGAGTTGGCTCCAAAGCCTTaGTCCTTTTTGTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: GPKGFHGLTEVTELDSDELAPKP*SFLSDS
Trigger: AGAGTCTGACAAAAAGGACAAAGGCTTTGGAGCCAA...CTCATCACTGTCTAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTTGGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCACACTCTGGGTTTAAGGGGTTTCATGGCTaGACTGAAGTCACAGAATTA +
Preference number: 5 (lower is better)
Translates to: LQVSVPEVKRKGSPHSGFKGFHG*TEVTEL
Trigger: TAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTT...AAACCCAGAGTGTGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp CTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTTCGGTGTCCCCAGAGCAAAGTaGGGCAGTAAATTACAAAAG +
Preference number: 5 (lower is better)
Translates to: LSVEVQNKKQSFFLAGFGVPRAK*GSKLQK
Trigger: CTTTTGTAATTTACTGCCCAACTTTGCTCTGGGGAC...ACCGAAACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR CAA 90 bp CATGGCTTGACTGAAGTCACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTTACACCCAGATACTATaGTCCCCCTCCTCTTGCCAT +
Preference number: 5 (lower is better)
Translates to: HGLTEVTELDSDETSWSTYTQIL*SPSSCH
Trigger: ATGGCAAGAGGAGGGGGACAATAGTATCTGGGTGTA...AGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGTGACTTCAGTCAAGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTGACTGAAGTCACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTTGGCTCTACACCCAGATACTATaGTCCCCCTCCTCTTGCCAT +
Preference number: 5 (lower is better)
Translates to: LTEVTELDSDETSWSTWLYTQIL*SPSSCH
Trigger: ATGGCAAGAGGAGGGGGACAATAGTATCTGGGTGTA...GAGCCAAGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGTGACTTCAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS CCA 90 bp TGGTTGACAGACATAAAGAAGGCAAATAAACTAGGGACAGACCCTTaGGGCATTACCTTCTATCACTGTCACCAGCAATCATTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: WLTDIKKANKLGTDP*GITFYHCHQQSFKA
Trigger: GGCCTTGAATGATTGCTGGTGACAGTGATAGAAGGTAATGCCCCAAGGGTCTGTCCCTAGTTTATTTGCCTTCTTTATGTCTGTCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436387.1
CDS-3UTR CAA 90 bp TTGACTGAAGTCACAGAATTAGACAGTGATGAGACTTCCTGGTCTACTTGGCTCTCTGGGTTTATGGCCTaGAAGTCGAGCAAGCTATAC +
Preference number: 5 (lower is better)
Translates to: LTEVTELDSDETSWSTWLSGFMA*KSSKLY
Trigger: GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGA...GAGCCAAGTAGACCAGGAAGTCTCATCACTGTCTAATTCTGTGACTTCAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTTGGCTCCAAAGCCTTaGTCCTTTTTGTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: LSDSDGSLWRSRTKSNPSLAPKP*SFLSDS
Trigger: AGAGTCTGACAAAAAGGACAAAGGCTTTGGAGCCAA...AGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp GATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGGTTAAGGGGTTTCATGGCTaGACTGAAGTCACAGAATTA +
Preference number: 5 (lower is better)
Translates to: DGSLWRSRTKSNPSSLQVKGFHG*TEVTEL
Trigger: TAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTT...AACCTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp AATCCTTCTTCCTTGCAGGTTTCGGTCCCAGAGGTAAAGAGAAAGGGAAGTCCAAAGGGGTTTCATGGCTaGACTGAAGTCACAGAATTA +
Preference number: 5 (lower is better)
Translates to: NPSSLQVSVPEVKRKGSPKGFHG*TEVTEL
Trigger: TAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTT...TGGACTTCCCTTTCTCTTTACCTCTGGGACCGAAACCTGCAAGGAAGAAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATCCTTCTTCCTTGCAGAAGGGGTTTCATGGCTaGACTGAAGTCACAGAATTA +
Preference number: 5 (lower is better)
Translates to: SDGSLWRSRTKSNPSSLQKGFHG*TEVTEL
Trigger: TAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTT...CTGCAAGGAAGAAGGATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp AAGGCATTCACCTATGAGGCCAGCGAATATGAAGTCGAGGCCTGGAATTGCAGTCTACAAAAGTTACTTTaGGGACAATTGGGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: KAFTYEASEYEVEAWNCSLQKLL*GQLGRF
Trigger: AAACCTCCCCAATTGTCCCAAAAGTAACTTTTGTAG...ACTGCAATTCCAGGCCTCGACTTCATATTCGCTGGCCTCATAGGTGAATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp TTAGTCAGCATGATCCTTGCTTCAACAAGTTCTCAGTCCAGAGAAAAACAGACTCAAACATGCCACACCTaGCTCCAGTGGACAATGGGT +
Preference number: 5 (lower is better)
Translates to: LVSMILASTSSQSREKQTQTCHT*LQWTMG
Trigger: ACCCATTGTCCACTGGAGCAAGGTGTGGCATGTTTG...AGTCTGTTTTTCTCTGGACTGAGAACTTGTTGAAGCAAGGATCATGCTGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATACCAGGCACTATGCTTACCTTAGAAATCTaGCCAACACATCCAGATCTA +
Preference number: 5 (lower is better)
Translates to: FVSCMVCQDLSSVIPGTMLTLEI*PTHPDL
Trigger: TAGATCTGGATGTGTTGGCAAGATTTCTAAGGTAAG...CATAGTGCCTGGTATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CAA 90 bp TCCTTTTTGTCAGACTCTGATGGCTCTCTGTGGAGGTCCAGAACAAAAAGCAATTTGGCTCCAAAGCCTTaGTCCTTTTTGTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: SFLSDSDGSLWRSRTKSNLAPKP*SFLSDS
Trigger: AGAGTCTGACAAAAAGGACAAAGGCTTTGGAGCCAA...ATTGCTTTTTGTTCTGGACCTCCACAGAGAGCCATCAGAGTCTGACAAAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000677900.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TGGGTTTATGGCCTTGAAGTCGAGCAAGCTATACTAAGAGAACAGAGTAAGTACGTCCCCAGAGCAAAGTaGGGCAGTAAATTACAAAAG +
Preference number: 5 (lower is better)
Translates to: WVYGLEVEQAILREQSKYVPRAK*GSKLQK
Trigger: CTTTTGTAATTTACTGCCCAACTTTGCTCTGGGGAC...GTACTTACTCTGTTCTCTTAGTATAGCTTGCTCGACTTCAAGGCCATAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
CDS-3UTR CAA 90 bp GTGATGGATTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTAGAAAGGGGAGTGGAATaGCAGGTGGGTATTGTCAAG +
Preference number: 5 (lower is better)
Translates to: VMDFSLVLFSYLAMSLILERGVE*QVGIVK
Trigger: CTTGACAATACCCACCTGCAATTCCACTCCCCTTTC...TAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAATCCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGAGAAAGGGGAGTGGAATaGCAGGTGGGTATTGTCAAG +
Preference number: 5 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRERGVE*QVGIVK
Trigger: CTTGACAATACCCACCTGCAATTCCACTCCCCTTTC...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000677926.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp TGTATAAATGTACTTTGTAAGCTGCATGGTGTGCCAGGACCTAAGCTCTGTCATAAGGGGTTTCATGGCTaGACTGAAGTCACAGAATTA +
Preference number: 5 (lower is better)
Translates to: CINVLCKLHGVPGPKLCHKGFHG*TEVTEL
Trigger: TAATTCTGTGACTTCAGTCAAGCCATGAAACCCCTT...ATGACAGAGCTTAGGTCCTGGCACACCATGCAGCTTACAAAGTACATTTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000679245.1
CDS-3UTR CAA 90 bp TTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATGAAAGGGGAGTGGAATaGCAGGTGGGTATTGTCAAG +
Preference number: 5 (lower is better)
Translates to: FLPCTLLILGNVTHITSDERGVE*QVGIVK
Trigger: CTTGACAATACCCACCTGCAATTCCACTCCCCTTTC...ATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp CTAACATTTATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCAATGCAAGCAGCTTaGCCTTTGTACTGGACTGGA +
Preference number: 5 (lower is better)
Translates to: LTFMVKHTISFICPSQLHAMQAA*PLYWTG
Trigger: TCCAGTCCAGTACAAAGGCAAAGCTGCTTGCATTGC...ATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATAAATGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678193.1
CDS-3UTR CAA 90 bp TATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATATCTGGGTTTATGGCCTaGAAGTCGAGCAAGCTATAC +
Preference number: 5 (lower is better)
Translates to: YGQAYYLIYLPFTTPCIISGFMA*KSSKLY
Trigger: GTATAGCTTGCTCGACTTCAAGGCCATAAACCCAGA...TATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
ENST00000679245.1
CDS-3UTR CAA 90 bp CCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCCTACAAAAGTTACTTTaGGGACAATTGGGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: PCTLLILGNVTHITSDHLLQKLL*GQLGRF
Trigger: AAACCTCCCCAATTGTCCCAAAAGTAACTTTTGTAG...GAGGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp TATGGTCAAGCATACTATCTCATTTATTTGCCCTTCACAACTCCATGCATTATAGTCCCCAGAGCAAAGTaGGGCAGTAAATTACAAAAG +
Preference number: 5 (lower is better)
Translates to: YGQAYYLIYLPFTTPCIIVPRAK*GSKLQK
Trigger: CTTTTGTAATTTACTGCCCAACTTTGCTCTGGGGAC...TATAATGCATGGAGTTGTGAAGGGCAAATAAATGAGATAGTATGCTTGACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676675.1
ENST00000677312.1
ENST00000678193.1
ENST00000678333.1
CDS-3UTR CAA 90 bp TCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCGTACTCTTCTCATACTaGGCAATGTCACTCATATTA +
Preference number: 5 (lower is better)
Translates to: SLVLFSYLAMSLILLVITVLFSY*AMSLIL
Trigger: TAATATGAGTGACATTGCCAAGTATGAGAAGAGTAC...GGTGATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp TTTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCTACAAAAGTTACTTTaGGGACAATTGGGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: FLPCTLLILGNVTHITSDLQKLL*GQLGRF
Trigger: AAACCTCCCCAATTGTCCCAAAAGTAACTTTTGTAG...ATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp TTCTCCCTTGTACTCTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCGTACTCTTCTCATACTaGGCAATGTCACTCATATTA +
Preference number: 5 (lower is better)
Translates to: FSLVLFSYLAMSLILLVIVLFSY*AMSLIL
Trigger: TAATATGAGTGACATTGCCAAGTATGAGAAGAGTAC...GATCACTAGTAATATGAGTGACATTGCCAAGTATGAGAAGAGTACAAGGGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000677219.1
ENST00000678038.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS-3UTR CAA 90 bp TGTCAAGAGGGGCTTTCACTTTATCTGTTTGGTGTGAAAGTTTTCACAATGAGAGTACTCTTCTCATACTaGGCAATGTCACTCATATTA +
Preference number: 5 (lower is better)
Translates to: CQEGLSLYLFGVKVFTMRVLFSY*AMSLIL
Trigger: TAATATGAGTGACATTGCCAAGTATGAGAAGAGTAC...TCTCATTGTGAAAACTTTCACACCAAACAGATAAAGTGAAAGCCCCTCTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677219.1
ENST00000678076.1
ENST00000678308.1
ENST00000678803.1
CDS CCA 72 bp GCCATGGCTCCGACCCGGAAGCAGAAGTCGGGAGCGTaGGATTCCGGCGAACCTAAAGCCCGGTCCGCGGAT +
Preference number: 6 (lower is better)
Translates to: AMAPTRKQKSGA*DSGEPKARSAD
Trigger: ATCCGCGGACCGGGCTTTAGGTTCGCCGGAATCCCACGCTCCCGACTTCTGCTTCCGGGTCGGAGCCATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372550.6
ENST00000676675.1
ENST00000677900.1
ENST00000678038.1
CDS CCA 72 bp CGGCAGGTCGGTAGGTTCGGGTGCAATTTCACTTTCTaGCTGGCTTCCCGAGTCCGCTCTCTCTGGGTGAGT +
Preference number: 6 (lower is better)
Translates to: RQVGRFGCNFTF*LASRVRSLWVS
Trigger: ACTCACCCAGAGAGAGCGGACTCGGGAAGCCAGCCAGAAAGTGAAATTGCACCCGAACCTACCGACCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440068.6