RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPIG (Homo sapiens)

Ensembl gene IDs: ENSG00000138398

Ensembl transcript IDs: ENST00000260970.8, ENST00000414307.6, ENST00000417938.2, ENST00000433207.6, ENST00000448752.7, ENST00000462903.6, ENST00000466142.1, ENST00000676508.1, ENST00000676557.1, ENST00000676756.1, ENST00000677392.1, ENST00000677750.1, ENST00000678088.1, ENST00000678499.1, ENST00000678638.1, ENST00000678695.1, ENST00000678721.1, ENST00000679107.1, ENST00000679324.1

Found 542 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCAAAGACTTTGCACTTGCCCGAATCCACTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAGTTGTGCCAGTCAATGCTGTACTTC +
Preference number: 1 (lower is better)
Translates to: GQRLCTCPNPLKAVS*EAHYGQLCQSMLYF
Trigger: GAAGTACAGCATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR TCA 90 bp AAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTaGCTAAACAAATTAGGATGCTATTGGCTAATTGTTGCAACACAG +
Preference number: 1 (lower is better)
Translates to: KHKLLQQCIATIPNG*LNKLGCYWLIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
3UTR GCA 90 bp CTCAGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTaGAAACCTCTATTTATAACGCAATCAGAAAATCTATACAAGATG +
Preference number: 1 (lower is better)
Translates to: LRLLGPCFCVIKRNR*KPLFITQSENLYKM
Trigger: CATCTTGTATAGATTTTCTGATTGCGTTATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
3UTR GCA 90 bp ACTGAGAATCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATaGTGTATAACAGCAACTCAAGCTCAATCAGTACATCAACTGAAA +
Preference number: 1 (lower is better)
Translates to: TENHNLIFQGIVPVK*CITATQAQSVHQLK
Trigger: TTTCAGTTGATGTACTGATTGAGCTTGAGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGATTCTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCTGCATGCGCAGATCCTaGGGTACAGTTAATGCTGTT +
Preference number: 2 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKACMRRS*GTVNAV
Trigger: AACAGCATTAACTGTACCTCAGGATCTGCGCATGCA...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGGCATTGAGTAGCTACTaGATTTACCAAGAAGCTACC +
Preference number: 2 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQALSSY*IYQEAT
Trigger: GGTAGCTTCTTGGTAAATCCAGTAGCTACTCAATGC...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCAAGGAAAGGACCATTTaGGCCGTGTGCTATTCAGAT +
Preference number: 2 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAKERTI*AVCYSD
Trigger: ATCTGAATAGCACACGGCTCAAATGGTCCTTTCCTT...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGCAATTATCCCTAATGTaGGTTTGTGGTCAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQQLSLM*VCGQSL
Trigger: TAGAGACTGACCACAAACCCACATTAGGGATAATTG...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATTCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: YTIHSATATTTPNISILHSLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678721.1
3UTR-3UTR GCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACATGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 2 (lower is better)
Translates to: QISYGRYLKYLLVKANPTCYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAGTTGTGCCAGTCAATaGTGTACTTCCTGGGGGCTT +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQSCASQ*CTSWGL
Trigger: AAGCCCCCAGGAAGTACAGCATTGACTGGCACAACT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT +
Preference number: 2 (lower is better)
Translates to: QISYGRYLKYLLVKANPTIYGTP*FCCDLC
Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678721.1
3UTR-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCAAAGATGCATTTTCTTaGCATTTGGAACTCACAGCT +
Preference number: 2 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAKDAFS*HLELTA
Trigger: AGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTTT...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAACCGCAAAGCCGTCCATaGATCAGTATCACATTTGTG +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQPQSRP*ISITFV
Trigger: CACAAATGTGATACTGATGCATGGACGGCTTTGCGG...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAACACTATGGGCAGTTGTaGCAGTCAATGCTGTACTTC +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQHYGQL*QSMLYF
Trigger: GAAGTACAGCATTGACTGGCACAACTGCCCATAGTG...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAACAAAGACTTTGCACTTaGCCGAATCCACTGAAGGCA +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQQRLCT*PNPLKA
Trigger: TGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTG...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAGCATTGAGTAGCTACTaGATTTACCAAGAAGCTACC +
Preference number: 2 (lower is better)
Translates to: QISYGRYLKYLLVKANPTALSSY*IYQEAT
Trigger: GGTAGCTTCTTGGTAAATCCAGTAGCTACTCAATGC...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAG +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNLKAVS*EAHYGQ
Trigger: CTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678721.1
3UTR-3UTR TCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 2 (lower is better)
Translates to: QISYGRYLKYLLVKANPTTIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACATGGTATAAAACCACCTaGAGAGAAAGAAACCAGAGT +
Preference number: 2 (lower is better)
Translates to: QISYGRYLKYLLVKANPTWYKTT*RERNQS
Trigger: ACTCTGGTTTCTTTCTCTTCAGGTGGTTTTATACCA...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCTATTGGCTAATTGTTaGAACACAGTAATGCATACA +
Preference number: 2 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKALLANC*NTVMHT
Trigger: TGTATGCATTACTGTGTTGCAACAATTAGCCAATAG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCATAGTTCCTGTCAAATaGTGTATAACAGCAACTCAA +
Preference number: 2 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAIVPVK*CITATQ
Trigger: TTGAGTTGCTGTTATACAGCATTTGACAGGAACTAT...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 2 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNCGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQCGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 2 (lower is better)
Translates to: HNLIFQGIVPVKCCITATCGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNCYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCTCAGTATCACATTTGTaGAAAGGCAGATTTATCAGA +
Preference number: 2 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKASVSHL*KGRFIR
Trigger: TCTGATAAATCTGCCTTTGCACAAATGTGATACTGA...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCAAAGACTTTGCACTTaGCCGAATCCACTGAAGGCA +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNQRLCT*PNPLKA
Trigger: TGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTTGGGAAGCTCACTATaGGCAGTTGTGCCAGTCAAT +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNLGSSL*AVVPVN
Trigger: ATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATGGAACTCACAGCTATaGGAGTTAGAGAAGTCAGTT +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQWNSQL*ELEKSV
Trigger: AACTGACTTCTCTAACTCTCATAGCTGTGAGTTCCA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAAAAGATGCATTTTCTTaGCATTTGGAACTCACAGCT +
Preference number: 2 (lower is better)
Translates to: QISYGRYLKYLLVKANPTKDAFS*HLELTA
Trigger: AGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTTT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTTACACTATTCATTCTaGAACAGCTACCACAACGCC +
Preference number: 2 (lower is better)
Translates to: HNLIFQGIVPVKCCITATLHYSF*NSYHNA
Trigger: GGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAA...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTAAACGGTTTGCTAGCTaGATCTGTTTTCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAKRFAS*ICFLVF
Trigger: GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678721.1
3UTR-3UTR TCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 2 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNTIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATGGTATAAAACCACCTaGAGAGAAAGAAACCAGAGT +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQWYKTT*RERNQS
Trigger: ACTCTGGTTTCTTTCTCTTCAGGTGGTTTTATACCA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTGGTATAAAACCACCTaGAGAGAAAGAAACCAGAGT +
Preference number: 2 (lower is better)
Translates to: HNLIFQGIVPVKCCITATWYKTT*RERNQS
Trigger: ACTCTGGTTTCTTTCTCTTCAGGTGGTTTTATACCA...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 2 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 2 (lower is better)
Translates to: HNLIFQGIVPVKCCITATFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTTACACTATTCATTCTaGAACAGCTACCACAACGCC +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNLHYSF*NSYHNA
Trigger: GGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 2 (lower is better)
Translates to: QISYGRYLKYLLVKANPTKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATGCATTGAGTAGCTACTaGATTTACCAAGAAGCTACC +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNALSSY*IYQEAT
Trigger: GGTAGCTTCTTGGTAAATCCAGTAGCTACTCAATGC...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACCAATTATCCCTAATGTaGGTTTGTGGTCAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNQLSLM*VCGQSL
Trigger: TAGAGACTGACCACAAACCCACATTAGGGATAATTG...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 2 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678721.1
3UTR-3UTR TCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 2 (lower is better)
Translates to: YTIHSATATTTPNISILHTIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNTIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATTGGTATAAAACCACCTaGAGAGAAAGAAACCAGAGT +
Preference number: 2 (lower is better)
Translates to: YTIHSATATTTPNISILHWYKTT*RERNQS
Trigger: ACTCTGGTTTCTTTCTCTTCAGGTGGTTTTATACCA...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR TCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTGGTATAAAACCACCTaGAGAGAAAGAAACCAGAGT +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNWYKTT*RERNQS
Trigger: ACTCTGGTTTCTTTCTCTTCAGGTGGTTTTATACCA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 2 (lower is better)
Translates to: HNLIFQGIVPVKCCITATRNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQRNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAACAGAGATCCAATATGTaGCTATCCATAATGAAGAGT +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQQRSNM*LSIMKS
Trigger: ACTCTTCATTATGGATAGGCACATATTGGATCTCTG...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAAGCTTTTGCAACAATaGATTGCAACCATTCCAAAT +
Preference number: 2 (lower is better)
Translates to: MVITLFILQQLPQRQIYQKLLQQ*IATIPN
Trigger: ATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 2 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNRLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATAAAGATGCATTTTCTTaGCATTTGGAACTCACAGCT +
Preference number: 2 (lower is better)
Translates to: YTIHSATATTTPNISILHKDAFS*HLELTA
Trigger: AGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTTT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATAAAGATGCATTTTCTTaGCATTTGGAACTCACAGCT +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNKDAFS*HLELTA
Trigger: AGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTTT...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCTATTGGCTAATTGTTaGAACACAGTAATGCATACA +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNLLANC*NTVMHT
Trigger: TGTATGCATTACTGTGTTGCAACAATTAGCCAATAG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATATAGTTCCTGTCAAATaGTGTATAACAGCAACTCAA +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNIVPVK*CITATQ
Trigger: TTGAGTTGCTGTTATACAGCATTTGACAGGAACTAT...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTCAGTATCACATTTGTaGAAAGGCAGATTTATCAGA +
Preference number: 2 (lower is better)
Translates to: DACADPEVQLMLFNHFKNSVSHL*KGRFIR
Trigger: TCTGATAAATCTGCCTTTGCACAAATGTGATACTGA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 2 (lower is better)
Translates to: YTIHSATATTTPNISILHKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR CCA 72 bp CTTTGCACTTGCCCGAATCCACTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAGTTGTGCCAGTCAATG +
Preference number: 3 (lower is better)
Translates to: LCTCPNPLKAVS*EAHYGQLCQSM
Trigger: CATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAGTGGATTCGGGCAAGTGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQTSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678721.1
3UTR-3UTR CAA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGCTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQLCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678721.1
3UTR GCA 72 bp CCTCTTTGTCACACAATAGGCCAAAGACTTTGCACTTaGCCGAATCCACTGAAGGCAGTTAGTTGGGAAGCT +
Preference number: 3 (lower is better)
Translates to: PLCHTIGQRLCT*PNPLKAVSWEA
Trigger: AGCTTCCCAACTAACTGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTGGCCTATTGTGTGACAAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGTACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 3 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGCAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 3 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 3 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCTTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 3 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATGCTCACTATGGGCAGTaGTGCCAGTCAATGCTGTAC +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNAHYGQ*CQSMLY
Trigger: GTACAGCATTGACTGGCACAACTGCCCATAGTGAGC...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCCAAAGACTTTGCACTaGCCCGAATCCACTGAAGGC +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNPKTLH*PESTEG
Trigger: GCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTGG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR GCA 72 bp GCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATaGATCAGTATCACATTTGTGCAAAGGCAGATTTAT +
Preference number: 3 (lower is better)
Translates to: AQISKVIPQSRP*ISITFVQRQIY
Trigger: ATAAATCTGCCTTTGCACAAATGTGATACTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACATACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 3 (lower is better)
Translates to: QISYGRYLKYLLVKANPTYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCATGGAGTTGCTCTTTaGATAACCCAAACAGAATAT +
Preference number: 3 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAHGVAL*ITQTEY
Trigger: ATATTCTGTTTGGGTTATCAAAAGAGCAACTCCATG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAATAGGCCAAAGACTTaGCACTTGCCCGAATCCACT +
Preference number: 3 (lower is better)
Translates to: MVITLFILQQLPQRQIYQNRPKT*HLPEST
Trigger: AGTGGATTCGGGCAAGTGCAAAGTCTTTGGCCTATT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAAAGGAAAGGACCATTaGAGCCGTGTGCTATTCAGA +
Preference number: 3 (lower is better)
Translates to: MVITLFILQQLPQRQIYQKGKDH*SRVLFR
Trigger: TCTGAATAGCACACGGCTCAAATGGTCCTTTCCTTT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACAAAGGAAAGGACCATTaGAGCCGTGTGCTATTCAGA +
Preference number: 3 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNKGKDH*SRVLFR
Trigger: TCTGAATAGCACACGGCTCAAATGGTCCTTTCCTTT...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAGCATTTTCTTGCCATTaGGAACTCACAGCTATGAGA +
Preference number: 3 (lower is better)
Translates to: MVITLFILQQLPQRQIYQAFSCH*ELTAMR
Trigger: TCTCATAGCTGTGAGTTCCAAATGGCAAGAAAATGC...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 3 (lower is better)
Translates to: HNLIFQGIVPVKCCITATYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAACTCCCTACTCCAACCTaGTTGACGGAATTTTCTTAT +
Preference number: 3 (lower is better)
Translates to: MVITLFILQQLPQRQIYQLPTPT*LTEFSY
Trigger: ATAAGAAAATTCCGTCAACAAGGTTGGAGTAGGGAG...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCCAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 3 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 3 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 3 (lower is better)
Translates to: YTIHSATATTTPNISILHEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCTCCCTACTCCAACCTaGTTGACGGAATTTTCTTAT +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNLPTPT*LTEFSY
Trigger: ATAAGAAAATTCCGTCAACAAGGTTGGAGTAGGGAG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATAGAGCGGCCACAATTTaGTACATCCCACATACAAAT +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNRAATI*YIPHTN
Trigger: ATTTGTATGTGGGATGTACAAAATTGTGGCCGCTCT...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR GCA 72 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATaGTGTATAACAGCAACTCAAGCTCAATCAGTACAT +
Preference number: 3 (lower is better)
Translates to: HNLIFQGIVPVK*CITATQAQSVH
Trigger: ATGTACTGATTGAGCTTGAGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR CCA 72 bp TTGCTTTATTCAGTACAAATAGCATTGAGTAGCTACTaGATTTACCAAGAAGCTACCTTGGTAACAGAGTTG +
Preference number: 3 (lower is better)
Translates to: LLYSVQIALSSY*IYQEATLVTEL
Trigger: CAACTCTGTTACCAAGGTAGCTTCTTGGTAAATCCAGTAGCTACTCAATGCTATTTGTACTGAATAAAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAATAACGTTATATAGCTaGGGCACTCAGACTCAATTA +
Preference number: 3 (lower is better)
Translates to: MVITLFILQQLPQRQIYQITLYS*GTQTQL
Trigger: TAATTGAGTCTGAGTGCCCAAGCTATATAACGTTAT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTATAACGTTATATAGCTaGGGCACTCAGACTCAATTA +
Preference number: 3 (lower is better)
Translates to: HNLIFQGIVPVKCCITATITLYS*GTQTQL
Trigger: TAATTGAGTCTGAGTGCCCAAGCTATATAACGTTAT...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTCATGGAGTTGCTCTTTaGATAACCCAAACAGAATAT +
Preference number: 3 (lower is better)
Translates to: HNLIFQGIVPVKCCITATHGVAL*ITQTEY
Trigger: ATATTCTGTTTGGGTTATCAAAAGAGCAACTCCATG...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATGCATCAGTATCACATTaGTGCAAAGGCAGATTTATC +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNASVSH*CKGRFI
Trigger: GATAAATCTGCCTTTGCACAAATGTGATACTGATGC...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCCTACTCCAACCTTGTaGACGGAATTTTCTTATTCA +
Preference number: 3 (lower is better)
Translates to: DACADPEVQLMLFNHFKNPTPTL*TEFSYS
Trigger: TGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAGG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCGAGGAGTTGGTTTCGTaGTTCTTTTGGAAATCATCA +
Preference number: 3 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSEELVS*FFWKSS
Trigger: TGATGATTTCCAAAAGAACAACGAAACCAACTCCTC...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678721.1
3UTR-3UTR CAA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATCAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 3 (lower is better)
Translates to: YTIHSATATTTPNISILHQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
3UTR GCA 72 bp TCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTaGAACAATGCATTGCAACCATTCCAAATGGCTGAC +
Preference number: 3 (lower is better)
Translates to: SKVTLIMRNTSF*NNALQPFQMAD
Trigger: GTCAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
3UTR TCA 72 bp AAGATGCATTTTCTTGCCATTTGGAACTCACAGCTATaGGAGTTAGAGAAGTCAGTTCAATTAAAACAAACA +
Preference number: 3 (lower is better)
Translates to: KMHFLAIWNSQL*ELEKSVQLKQT
Trigger: TGTTTGTTTTAATTGAACTGACTTCTCTAACTCTCATAGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTGGGGAGGGCGGGGGCTaGCAGAGGAAGGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAGEGGG*QRKDRP
Trigger: GGGACGGTCCTTCCTCTGCCAGCCCCCGCCCTCCCC...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR CCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAAGGTGTGCGCCTGAGTaGGGAGGGCGGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QISYGRYLKYLLVKANPTRCAPE*GGRGLA
Trigger: TGCCAGCCCCCGCCCTCCCCACTCAGGCGCACACCT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGCCCCGGGGCTCGACTaGAAGCCTTCTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAAPGLD*KPSPSA
Trigger: TGCAGAAGGAGAAGGCTTGCAGTCGAGCCCCGGGGC...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACGGGGAGGGCGGGGGCTaGCAGAGGAAGGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNGEGGG*QRKDRP
Trigger: GGGACGGTCCTTCCTCTGCCAGCCCCCGCCCTCCCC...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGTCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQSLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAAGGTGTGCGCCTGAGTaGGGAGGGCGGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIRCAPE*GGRGLA
Trigger: TGCCAGCCCCCGCCCTCCCCACTCAGGCGCACACCT...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAGCCCCGGGGCTCGACTaGAAGCCTTCTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLAPGLD*KPSPSA
Trigger: TGCAGAAGGAGAAGGCTTGCAGTCGAGCCCCGGGGC...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCTCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKASLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGAGTTGTGCCAGTCAATaGTGTACTTCCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQSCASQ*CTSWGL
Trigger: AAGCCCCCAGGAAGTACAGCATTGACTGGCACAACT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGTGTGCTCCACTTACCTaGACCGGTAGAGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQCAPLT*TGRVFL
Trigger: GAGGAAAACTCTACCGGTGCAGGTAAGTGGAGCACA...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676756.1
ENST00000678721.1
CDS-3UTR CCA 90 bp ACAGTGATTGCCAAGAAACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCCACAACTCAGTCCTaGCATGGAGAGACAGCGTCG +
Preference number: 4 (lower is better)
Translates to: TVIAKKHGRQERPRSHFIPTTQS*HGETAS
Trigger: CGACGCTGTCTCTCCATGCCAGGACTGAGTTGTGGG...TATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTTTCTTGGCAATCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414307.6
CDS-3UTR TCA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCTCTGTCATGGGTTCTTaGTCGCACTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EYPYLRKRFASCICFLVFSVMGS*SHSSAS
Trigger: AGAAGCAGAAGAGTGCGATCAAGAACCCATGACAGA...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678721.1
CDS-3UTR TCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCTTGCCCGAATCCACTaGAGGCAGTTAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKALARIH*RQLVGK
Trigger: CTTCCCAACTAACTGCCTTCAGTGGATTCGGGCAAG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGCTCTCTGCATCTCTTaGCTCCAATGTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAALCIS*LQCGGV
Trigger: GACTCCTCCACATTGGAGGCAAGAGATGCAGAGAGC...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCTGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: EYPYLRKRFASCICFLVFCYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678721.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGCAAAGACTTTGCACTTaGCCGAATCCACTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQQRLCT*PNPLKA
Trigger: TGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTG...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACACTGGGTCCGGTCCTTTaGAGCGCTTCAAATCTACCG +
Preference number: 4 (lower is better)
Translates to: QISYGRYLKYLLVKANPTLGPVL*SASNLP
Trigger: CGGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAG...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000678088.1
ENST00000678721.1
CDS-3UTR TCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACATCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: QISYGRYLKYLLVKANPTSLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLSLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGAAGGAAAGGACCATTTaGGCCGTGTGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQKERTI*AVCYSD
Trigger: ATCTGAATAGCACACGGCTCAAATGGTCCTTTCCTT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCGTAATCCCAGCACTTTaGGGGGCGAAGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGVIPAL*GAKGGG
Trigger: TCCTCCTCCCTTCGCCCCTCAAAGTGCTGGGATTAC...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448752.7
CDS-3UTR TCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTGGCAAAATGCGTCAGTaGGGGAGGTGTGCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVGKMRQ*GRCAPE
Trigger: CTCAGGCGCACACCTCCCTCACTGACGCATTTTGCC...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQIYGTP*FCCDLC
Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCAGTTGTGCCAGTCAATaGTGTACTTCCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKASCASQ*CTSWGL
Trigger: AAGCCCCCAGGAAGTACAGCATTGACTGGCACAACT...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCAGGCCGCAGTCGCTaGCGCCATGTTACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGSGRSR*RHVTAC
Trigger: ACAAGCTGTAACATGGCGGCAGCGACTGCGGCCTGA...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678499.1
ENST00000678638.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAG +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKALKAVS*EAHYGQ
Trigger: CTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp AAGAAACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATGTAACTCAGTCCTGGCATaGAGAGACAGCGTCGCACCG +
Preference number: 4 (lower is better)
Translates to: KKHGRQERPRSHFIPCKCNSVLA*RDSVAP
Trigger: CGGTGCGACGCTGTCTCTCCATGCCAGGACTGAGTT...ACATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414307.6
CDS-3UTR CCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCTCAGGGACTTCCTCTaGGCCCAAGCAGCCCCGATA +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVLRDFL*AQAAPI
Trigger: TATCGGGGCTGCTTGGGCCCAGAGGAAGTCCCTGAG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679107.1
CDS-3UTR TCA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: EYPYLRKRFASCICFLVFTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417938.2
ENST00000678721.1
CDS-3UTR TCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTTCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMASLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGTGGAACTCACAGCTATaGGAGTTAGAGAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQWNSQL*ELEKSV
Trigger: AACTGACTTCTCTAACTCTCATAGCTGTGAGTTCCA...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAGGCAAAATGCGTCAGTaGGGGAGGTGTGCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKGKMRQ*GRCAPE
Trigger: CTCAGGCGCACACCTCCCTCACTGACGCATTTTGCC...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAGCTCTCTGCATCTCTTaGCTCCAATGTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLALCIS*LQCGGV
Trigger: GACTCCTCCACATTGGAGGCAAGAGATGCAGAGAGC...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGTTACACTATTCATTCTaGAACAGCTACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQLHYSF*NSYHNA
Trigger: GGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAA...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCTTACACTATTCATTCTaGAACAGCTACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: EYPYLRKRFASCICFLVFLHYSF*NSYHNA
Trigger: GGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAA...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678721.1
CDS-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCACTATGGGCAGTTGTaGCAGTCAATGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAHYGQL*QSMLYF
Trigger: GAAGTACAGCATTGACTGGCACAACTGCCCATAGTG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCAAAGACTTTGCACTTaGCCGAATCCACTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAQRLCT*PNPLKA
Trigger: TGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTCAGGCCGCAGTCGCTaGCGCCATGTTACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVSGRSR*RHVTAC
Trigger: ACAAGCTGTAACATGGCGGCAGCGACTGCGGCCTGA...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000678499.1
ENST00000678638.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAACAGCGGCAAAGGCACTaGTGCGGTCCTCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKQRQRH*CGPQGL
Trigger: AAGTCCCTGAGGACCGCAGCAGTGCCTTTGCCGCTG...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTGCTTGTGCGGCAAAATaGGTCAGTGAGGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAACAAK*VSEGGV
Trigger: CACACCTCCCTCACTGACGCATTTTGCCGCACAAGC...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCCCACAACTCAGTCCTaGCATGGAGAGACAGCGTCG +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVPTTQS*HGETAS
Trigger: CGACGCTGTCTCTCCATGCCAGGACTGAGTTGTGGG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000678088.1
CDS-3UTR CCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTCCCACAACTCAGTCCTaGCATGGAGAGACAGCGTCG +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATPTTQS*HGETAS
Trigger: CGACGCTGTCTCTCCATGCCAGGACTGAGTTGTGGG...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000678088.1
CDS-3UTR CCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTAACTCAGTCCTGGCATaGAGAGACAGCGTCGCACCG +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATNSVLA*RDSVAP
Trigger: CGGTGCGACGCTGTCTCTCCATGCCAGGACTGAGTT...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676508.1
ENST00000678088.1
CDS-3UTR CCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTAACTCAGTCCTGGCATaGAGAGACAGCGTCGCACCG +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVNSVLA*RDSVAP
Trigger: CGGTGCGACGCTGTCTCTCCATGCCAGGACTGAGTT...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433207.6
ENST00000676508.1
ENST00000678088.1
CDS-3UTR TCA 90 bp ACATACAGAAGCTGCTTAAGAAAGAGAATATATAATTCAATGCCTGCATCTCCCCTGGGTCCGGTCCTTTaGAGCGCTTCAAATCTACCG +
Preference number: 4 (lower is better)
Translates to: TYRSCLRKRIYNSMPASPLGPVL*SASNLP
Trigger: CGGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAG...GGGAGATGCAGGCATTGAATTATATATTCTCTTTCTTAAGCAGCTTCTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR TCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVSLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCAAACGGTTTGCTAGCTaGATCTGTTTTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: EYPYLRKRFASCICFLVFKRFAS*ICFLVF
Trigger: GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTT...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000417938.2
ENST00000678721.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCGCTCTCTGCATCTCTTaGCTCCAATGTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGALCIS*LQCGGV
Trigger: GACTCCTCCACATTGGAGGCAAGAGATGCAGAGAGC...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATGTGCTCCACTTACCTaGACCGGTAGAGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLCAPLT*TGRVFL
Trigger: GAGGAAAACTCTACCGGTGCAGGTAAGTGGAGCACA...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676756.1
ENST00000678721.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCATCAGGCCGCAGTCGCTaGCGCCATGTTACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPSGRSR*RHVTAC
Trigger: ACAAGCTGTAACATGGCGGCAGCGACTGCGGCCTGA...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678499.1
ENST00000678638.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATCCCACAACTCAGTCCTaGCATGGAGAGACAGCGTCG +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHPTTQS*HGETAS
Trigger: CGACGCTGTCTCTCCATGCCAGGACTGAGTTGTGGG...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000678088.1
CDS-3UTR CCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCAACTCAGTCCTGGCATaGAGAGACAGCGTCGCACCG +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFNSVLA*RDSVAP
Trigger: CGGTGCGACGCTGTCTCTCCATGCCAGGACTGAGTT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433207.6
ENST00000676508.1
ENST00000678088.1
CDS-3UTR TCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCCTGGGTCCGGTCCTTTaGAGCGCTTCAAATCTACCG +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCLGPVL*SASNLP
Trigger: CGGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAG...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000678088.1
ENST00000678721.1
CDS-3UTR TCA 90 bp AAATCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCCTGGGTCCGGTCCTTTaGAGCGCTTCAAATCTACCG +
Preference number: 4 (lower is better)
Translates to: KSIHISWIFCWEVPTYRSLGPVL*SASNLP
Trigger: CGGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAG...GCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR TCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAACTGGGTCCGGTCCTTTaGAGCGCTTCAAATCTACCG +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKLGPVL*SASNLP
Trigger: CGGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAG...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000678088.1
ENST00000678721.1
CDS-3UTR TCA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCTTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: EYPYLRKRFASCICFLVFLVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417938.2
CDS-3UTR TCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACATCTGTCATGGGTTCTTaGTCGCACTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QISYGRYLKYLLVKANPTSVMGS*SHSSAS
Trigger: AGAAGCAGAAGAGTGCGATCAAGAACCCATGACAGA...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCTCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCSLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTCTCTCTCGGCTTCGTaGCCGTCCTCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSSLSAS*PSSSPV
Trigger: TACAGGAGAAGAGGACGGTCACGAAGCCGAGAGAGA...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTCTTGCCCGAATCCACTaGAGGCAGTTAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATLARIH*RQLVGK
Trigger: CTTCCCAACTAACTGCCTTCAGTGGATTCGGGCAAG...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGCTACTCCAACCTTGTTaGCGGAATTTTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQLLQPC*RNFLIH
Trigger: ATGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAG...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGTTCACTCTCACTAGATaGACTCTTCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQFTLTR*TLLAFL
Trigger: AAGAAAAGCAAGAAGAGTGCATCTAGTGAGAGTGAA...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260970.8
ENST00000676756.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACGCTCTCTGCATCTCTTaGCTCCAATGTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNALCIS*LQCGGV
Trigger: GACTCCTCCACATTGGAGGCAAGAGATGCAGAGAGC...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQRNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGAAAGATGCATTTTCTTaGCATTTGGAACTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQKDAFS*HLELTA
Trigger: AGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTTT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAGTTGTGCCAGTCAATaGTGTACTTCCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGSCASQ*CTSWGL
Trigger: AAGCCCCCAGGAAGTACAGCATTGACTGGCACAACT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTAGTTGTGCCAGTCAATaGTGTACTTCCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMASCASQ*CTSWGL
Trigger: AAGCCCCCAGGAAGTACAGCATTGACTGGCACAACT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCGCTTGTGCGGCAAAATaGGTCAGTGAGGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSACAAK*VSEGGV
Trigger: CACACCTCCCTCACTGACGCATTTTGCCGCACAAGC...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678499.1
ENST00000679107.1
CDS-3UTR CCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: EYPYLRKRFASCICFLVFAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000417938.2
ENST00000678721.1
CDS-3UTR CCA 90 bp CCAAGAAACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PRNTGDKKDLDPILYHVNRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...ATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGAGTTCGATAACGCCTTaGTCCTCTTCCTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQSSITP*SSSFNF
Trigger: AAAATTAAAGGAAGAGGACCAAGGCGTTATCGAACT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTGGGAAGCTCACTATaGGCAGTTGTGCCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLLGSSL*AVVPVN
Trigger: ATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAA...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAG +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMALKAVS*EAHYGQ
Trigger: CTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAG...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ACAGTGATTGCCAAGAAACACGGGAGACAAGAAAGACCTCGATCCCATTTTATAACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: TVIAKKHGRQERPRSHFITLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...TATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTTTCTTGGCAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR TCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCTGTCATGGGTTCTTaGTCGCACTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGSVMGS*SHSSAS
Trigger: AGAAGCAGAAGAGTGCGATCAAGAACCCATGACAGA...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAAAGGAAAGGACCATTTaGGCCGTGTGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLKERTI*AVCYSD
Trigger: ATCTGAATAGCACACGGCTCAAATGGTCCTTTCCTT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAACTTGCCCGAATCCACTaGAGGCAGTTAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKLARIH*RQLVGK
Trigger: CTTCCCAACTAACTGCCTTCAGTGGATTCGGGCAAG...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCTTGCCCGAATCCACTaGAGGCAGTTAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: DACADPEVQLMLFNHFKNLARIH*RQLVGK
Trigger: CTTCCCAACTAACTGCCTTCAGTGGATTCGGGCAAG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCACTTGCCCGAATCCACTaGAGGCAGTTAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPLARIH*RQLVGK
Trigger: CTTCCCAACTAACTGCCTTCAGTGGATTCGGGCAAG...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCGCTCTCTGCATCTCTTaGCTCCAATGTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCALCIS*LQCGGV
Trigger: GACTCCTCCACATTGGAGGCAAGAGATGCAGAGAGC...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAGCTCTCTGCATCTCTTaGCTCCAATGTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPALCIS*LQCGGV
Trigger: GACTCCTCCACATTGGAGGCAAGAGATGCAGAGAGC...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCGCTCTCTGCATCTCTTaGCTCCAATGTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSALCIS*LQCGGV
Trigger: GACTCCTCCACATTGGAGGCAAGAGATGCAGAGAGC...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLIYGTP*FCCDLC
Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCTTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACATGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 4 (lower is better)
Translates to: QISYGRYLKYLLVKANPTCGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGCYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGTCAGTATCACATTTGTaGAAAGGCAGATTTATCAGA +
Preference number: 4 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQSVSHL*KGRFIR
Trigger: TCTGATAAATCTGCCTTTGCACAAATGTGATACTGA...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCCGCAAAGCCGTCCATaGATCAGTATCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAPQSRP*ISITFV
Trigger: CACAAATGTGATACTGATGCATGGACGGCTTTGCGG...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTAGTTGTGCCAGTCAATaGTGTACTTCCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATSCASQ*CTSWGL
Trigger: AAGCCCCCAGGAAGTACAGCATTGACTGGCACAACT...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCACTATGGGCAGTTGTaGCAGTCAATGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAHYGQL*QSMLYF
Trigger: GAAGTACAGCATTGACTGGCACAACTGCCCATAGTG...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCCAAAGACTTTGCACTTaGCCGAATCCACTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGQRLCT*PNPLKA
Trigger: TGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTG...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCAAAGACTTTGCACTTaGCCGAATCCACTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAQRLCT*PNPLKA
Trigger: TGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTG...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACAGAAGCTGCTTAAGAAAGAGAATATATAATTCAATGCCTGCATCTCCCCTATGTGCTCCACTTACCTaGACCGGTAGAGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: YRSCLRKRIYNSMPASPLCAPLT*TGRVFL
Trigger: GAGGAAAACTCTACCGGTGCAGGTAAGTGGAGCACA...TAGGGGAGATGCAGGCATTGAATTATATATTCTCTTTCTTAAGCAGCTTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462903.6
CDS-3UTR CCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp AAGAAACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATGTAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KKHGRQERPRSHFIPCKCRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...ACATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMARLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATACTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFILKAVS*EAHYGQ
Trigger: CTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAG...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: QISYGRYLKYLLVKANPTTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260970.8
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCTTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKALVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTCTGTCATGGGTTCTTaGTCGCACTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVSVMGS*SHSSAS
Trigger: AGAAGCAGAAGAGTGCGATCAAGAACCCATGACAGA...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATCTGTCATGGGTTCTTaGTCGCACTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQSVMGS*SHSSAS
Trigger: AGAAGCAGAAGAGTGCGATCAAGAACCCATGACAGA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTCTGTCATGGGTTCTTaGTCGCACTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATSVMGS*SHSSAS
Trigger: AGAAGCAGAAGAGTGCGATCAAGAACCCATGACAGA...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATATGCATGCGCAGATCCTaGGGTACAGTTAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFICMRRS*GTVNAV
Trigger: AACAGCATTAACTGTACCTCAGGATCTGCGCATGCA...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATGCATGCGCAGATCCTaGGGTACAGTTAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQCMRRS*GTVNAV
Trigger: AACAGCATTAACTGTACCTCAGGATCTGCGCATGCA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTGCATGCGCAGATCCTaGGGTACAGTTAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNCMRRS*GTVNAV
Trigger: AACAGCATTAACTGTACCTCAGGATCTGCGCATGCA...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAIYGTP*FCCDLC
Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGIYGTP*FCCDLC
Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKARNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTTGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMACGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGCGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATATGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFICYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCCGCAAAGCCGTCCATaGATCAGTATCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVPQSRP*ISITFV
Trigger: CACAAATGTGATACTGATGCATGGACGGCTTTGCGG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAAGTTGTGCCAGTCAATaGTGTACTTCCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKSCASQ*CTSWGL
Trigger: AAGCCCCCAGGAAGTACAGCATTGACTGGCACAACT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCACTATGGGCAGTTGTaGCAGTCAATGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVHYGQL*QSMLYF
Trigger: GAAGTACAGCATTGACTGGCACAACTGCCCATAGTG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACCACTATGGGCAGTTGTaGCAGTCAATGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNHYGQL*QSMLYF
Trigger: GAAGTACAGCATTGACTGGCACAACTGCCCATAGTG...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACCAAAGACTTTGCACTTaGCCGAATCCACTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNQRLCT*PNPLKA
Trigger: TGCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTG...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATAGTTTTCCTCTTCTCTaGGTCCGGTCCTTTGAAGCG +
Preference number: 4 (lower is better)
Translates to: DACADPEVQLMLFNHFKNSFPLL*VRSFEA
Trigger: CGCTTCAAAGGACCGGACCCAGAGAAGAGGAAAACT...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678721.1
CDS-3UTR CCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAGCATTGAGTAGCTACTaGATTTACCAAGAAGCTACC +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLALSSY*IYQEAT
Trigger: GGTAGCTTCTTGGTAAATCCAGTAGCTACTCAATGC...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATTGGGAAGCTCACTATaGGCAGTTGTGCCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQLGSSL*AVVPVN
Trigger: ATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTGGGAAGCTCACTATaGGCAGTTGTGCCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNLGSSL*AVVPVN
Trigger: ATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAA...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTTGGGAAGCTCACTATaGGCAGTTGTGCCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATLGSSL*AVVPVN
Trigger: ATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAA...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCCTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCLKAVS*EAHYGQ
Trigger: CTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAG...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATCTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAG +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHLKAVS*EAHYGQ
Trigger: CTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAG...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCTGAAGGCAGTTAGTTaGGAAGCTCACTATGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFLKAVS*EAHYGQ
Trigger: CTGCCCATAGTGAGCTTCCCAACTAACTGCCTTCAG...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCACTCCTGAAATCACGGTaGTTCACACCCGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPLLKSR*FTPVIP
Trigger: TGGGATTACGGGTGTGAACCACCGTGATTTCAGGAG...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448752.7
CDS-3UTR TCA 90 bp ACAGTGATTGCCAAGAAACACGGGAGACAAGAAAGACCTCGATCCCATTTTATATTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: TVIAKKHGRQERPRSHFILVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...TATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTTTCTTGGCAATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR TCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTCTGTCATGGGTTCTTaGTCGCACTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSSVMGS*SHSSAS
Trigger: AGAAGCAGAAGAGTGCGATCAAGAACCCATGACAGA...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATTCTGTCATGGGTTCTTaGTCGCACTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHSVMGS*SHSSAS
Trigger: AGAAGCAGAAGAGTGCGATCAAGAACCCATGACAGA...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLTIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTGGAACTCACAGCTATaGGAGTTAGAGAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGWNSQL*ELEKSV
Trigger: AACTGACTTCTCTAACTCTCATAGCTGTGAGTTCCA...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTGCATGCGCAGATCCTaGGGTACAGTTAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: DACADPEVQLMLFNHFKNCMRRS*GTVNAV
Trigger: AACAGCATTAACTGTACCTCAGGATCTGCGCATGCA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCTGCATGCGCAGATCCTaGGGTACAGTTAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCCMRRS*GTVNAV
Trigger: AACAGCATTAACTGTACCTCAGGATCTGCGCATGCA...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAAGGAAAGGACCATTTaGGCCGTGTGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQKERTI*AVCYSD
Trigger: ATCTGAATAGCACACGGCTCAAATGGTCCTTTCCTT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACAAGGAAAGGACCATTTaGGCCGTGTGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNKERTI*AVCYSD
Trigger: ATCTGAATAGCACACGGCTCAAATGGTCCTTTCCTT...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAAAGGAAAGGACCATTTaGGCCGTGTGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIKERTI*AVCYSD
Trigger: ATCTGAATAGCACACGGCTCAAATGGTCCTTTCCTT...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAAAACGGTTTGCTAGCTaGATCTGTTTTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLKRFAS*ICFLVF
Trigger: GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIIYGTP*FCCDLC
Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKARLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCTGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFCYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCTGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCCYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSCYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAATGCTATTCAGATGCATaGGCAGATCCTGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKCYSDA*ADPEVQ
Trigger: CTGTACCTCAGGATCTGCGCATGCATCTGAATAGCA...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCCGCAAAGCCGTCCATaGATCAGTATCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: DACADPEVQLMLFNHFKNPQSRP*ISITFV
Trigger: CACAAATGTGATACTGATGCATGGACGGCTTTGCGG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCCCGCAAAGCCGTCCATaGATCAGTATCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCPQSRP*ISITFV
Trigger: CACAAATGTGATACTGATGCATGGACGGCTTTGCGG...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCCCGCAAAGCCGTCCATaGATCAGTATCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSPQSRP*ISITFV
Trigger: CACAAATGTGATACTGATGCATGGACGGCTTTGCGG...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCACCGCAAAGCCGTCCATaGATCAGTATCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPPQSRP*ISITFV
Trigger: CACAAATGTGATACTGATGCATGGACGGCTTTGCGG...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCACTATGGGCAGTTGTaGCAGTCAATGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFHYGQL*QSMLYF
Trigger: GAAGTACAGCATTGACTGGCACAACTGCCCATAGTG...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCACACTATGGGCAGTTGTaGCAGTCAATGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPHYGQL*QSMLYF
Trigger: GAAGTACAGCATTGACTGGCACAACTGCCCATAGTG...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPRLGVR*ITLSFP
Trigger: AGGGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCATTGGGAAGCTCACTATaGGCAGTTGTGCCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPLGSSL*AVVPVN
Trigger: ATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAA...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAATTGGGAAGCTCACTATaGGCAGTTGTGCCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKLGSSL*AVVPVN
Trigger: ATTGACTGGCACAACTGCCCATAGTGAGCTTCCCAA...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TACAGAAGCTGCTTAAGAAAGAGAATATATAATTCAATGCCTGCATCTCCCCTAACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: YRSCLRKRIYNSMPASPLTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...TAGGGGAGATGCAGGCATTGAATTATATATTCTCTTTCTTAAGCAGCTTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR TCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260970.8
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLLVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGTIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMATIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTGGAACTCACAGCTATaGGAGTTAGAGAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVWNSQL*ELEKSV
Trigger: AACTGACTTCTCTAACTCTCATAGCTGTGAGTTCCA...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATAAGGAAAGGACCATTTaGGCCGTGTGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHKERTI*AVCYSD
Trigger: ATCTGAATAGCACACGGCTCAAATGGTCCTTTCCTT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAAAGGAAAGGACCATTTaGGCCGTGTGCTATTCAGAT +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKKERTI*AVCYSD
Trigger: ATCTGAATAGCACACGGCTCAAATGGTCCTTTCCTT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACACTACTCCAACCTTGTTaGCGGAATTTTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: QISYGRYLKYLLVKANPTLLQPC*RNFLIH
Trigger: ATGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAG...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TTTAACAAGAATAGAGATACAGTGATTGCCAAGAAACACGGGAGACAAGAAAGAAGAATAGAGATACAGTaGTTGCCAAGAAACACGGGA +
Preference number: 4 (lower is better)
Translates to: FNKNRDTVIAKKHGRQERRIEIQ*LPRNTG
Trigger: TCCCGTGTTTCTTGGCAATCACTGTATCTCTATTCT...TCTTTCTTGTCTCCCGTGTTTCTTGGCAATCACTGTATCTCTATTCTTGTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462903.6
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTCACTCTCACTAGATaGACTCTTCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLFTLTR*TLLAFL
Trigger: AAGAAAAGCAAGAAGAGTGCATCTAGTGAGAGTGAA...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676756.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHIYGTP*FCCDLC
Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFIYGTP*FCCDLC
Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAAAAGATGCATTTTCTTaGCATTTGGAACTCACAGCT +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLKDAFS*HLELTA
Trigger: AGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTTT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 4 (lower is better)
Translates to: DACADPEVQLMLFNHFKNCGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCTGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFCGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTGCGGAGCATGGAGTTaGTCTTTTGATAACCCAAAC +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSCGAWS*SFDNPN
Trigger: GTTTGGGTTATCAAAAGAGCAACTCCATGCTCCGCA...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTACAGAGATCCAATATGTaGCTATCCATAATGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLQRSNM*LSIMKS
Trigger: ACTCTTCATTATGGATAGGCACATATTGGATCTCTG...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAAGTTCGATAACGCCTTaGTCCTCTTCCTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLSSITP*SSSFNF
Trigger: AAAATTAAAGGAAGAGGACCAAGGCGTTATCGAACT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTGCATTGAGTAGCTACTaGATTTACCAAGAAGCTACC +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVALSSY*IYQEAT
Trigger: GGTAGCTTCTTGGTAAATCCAGTAGCTACTCAATGC...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCAATTATCCCTAATGTaGGTTTGTGGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAQLSLM*VCGQSL
Trigger: TAGAGACTGACCACAAACCCACATTAGGGATAATTG...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCACTCTTCCAGCAGGTTaGTTGTTAATGGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCTLPAG*LLMAMS
Trigger: TGACATTGCCATTAACAATCAACCTGCTGGAAGAGT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTGGAACTCACAGCTATaGGAGTTAGAGAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSWNSQL*ELEKSV
Trigger: AACTGACTTCTCTAACTCTCATAGCTGTGAGTTCCA...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATATGGTATAAAACCACCTaGAGAGAAAGAAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIWYKTT*RERNQS
Trigger: ACTCTGGTTTCTTTCTCTTCAGGTGGTTTTATACCA...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTGGTATAAAACCACCTaGAGAGAAAGAAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNWYKTT*RERNQS
Trigger: ACTCTGGTTTCTTTCTCTTCAGGTGGTTTTATACCA...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCTACTCCAACCTTGTTaGCGGAATTTTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMALLQPC*RNFLIH
Trigger: ATGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAG...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTTTCACTCTCACTAGATaGACTCTTCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAFTLTR*TLLAFL
Trigger: AAGAAAAGCAAGAAGAGTGCATCTAGTGAGAGTGAA...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTACTATTGGCTAATTGTTaGAACACAGTAATGCATACA +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLLLANC*NTVMHT
Trigger: TGTATGCATTACTGTGTTGCAACAATTAGCCAATAG...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATATTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGRNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMARNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: QISYGRYLKYLLVKANPTRLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAATAGTTCCTGTCAAATaGTGTATAACAGCAACTCAA +
Preference number: 4 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLIVPVK*CITATQ
Trigger: TTGAGTTGCTGTTATACAGCATTTGACAGGAACTAT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAAAGATGCATTTTCTTaGCATTTGGAACTCACAGCT +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGKDAFS*HLELTA
Trigger: AGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTTT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATTTACACTATTCATTCTaGAACAGCTACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHLHYSF*NSYHNA
Trigger: GGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAA...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCATTACACTATTCATTCTaGAACAGCTACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPLHYSF*NSYHNA
Trigger: GGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAA...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAATTACACTATTCATTCTaGAACAGCTACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKLHYSF*NSYHNA
Trigger: GGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAA...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCTGCGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: SIHISWIFCWEVPTYRSCAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...GCAGCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAGTTCGATAACGCCTTaGTCCTCTTCCTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGSSITP*SSSFNF
Trigger: AAAATTAAAGGAAGAGGACCAAGGCGTTATCGAACT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATGCATTGAGTAGCTACTaGATTTACCAAGAAGCTACC +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHALSSY*IYQEAT
Trigger: GGTAGCTTCTTGGTAAATCCAGTAGCTACTCAATGC...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTCAATTATCCCTAATGTaGGTTTGTGGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATQLSLM*VCGQSL
Trigger: TAGAGACTGACCACAAACCCACATTAGGGATAATTG...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVLVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATATTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFILVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKTIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCACCATTCCAAATGGCTaGCTAAACAAATTAGGATGC +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFTIPNG*LNKLGC
Trigger: GCATCCTAATTTGTTTAGTCAGCCATTTGGAATGGT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCTGGTATAAAACCACCTaGAGAGAAAGAAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFWYKTT*RERNQS
Trigger: ACTCTGGTTTCTTTCTCTTCAGGTGGTTTTATACCA...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTCTACTCCAACCTTGTTaGCGGAATTTTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATLLQPC*RNFLIH
Trigger: ATGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAG...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCTACTCCAACCTTGTTaGCGGAATTTTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVLLQPC*RNFLIH
Trigger: ATGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AAATCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCAAACGGTTTGCTAGCTaGATCTGTTTTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: KSIHISWIFCWEVPTYRSKRFAS*ICFLVF
Trigger: GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTT...GCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR GCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCAAACGGTTTGCTAGCTaGATCTGTTTTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCKRFAS*ICFLVF
Trigger: GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATTCACTCTCACTAGATaGACTCTTCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQFTLTR*TLLAFL
Trigger: AAGAAAAGCAAGAAGAGTGCATCTAGTGAGAGTGAA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260970.8
ENST00000676756.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCTGTTCACTCTCACTAGATaGACTCTTCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IYSYLMDFLLGSTNIQKLFTLTR*TLLAFL
Trigger: AAGAAAAGCAAGAAGAGTGCATCTAGTGAGAGTGAA...CAGCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR GCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCTTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATTTTGCAACAATGCATTaGAACCATTCCAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHFATMH*NHSKWL
Trigger: CAGCCATTTGGAATGGTTGCAATGCATTGTTGCAAA...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVRNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGRLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAAAAGATGCATTTTCTTaGCATTTGGAACTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIKDAFS*HLELTA
Trigger: AGCTGTGAGTTCCAAATGGCAAGAAAATGCATCTTT...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCAGTATCACATTTGTaGAAAGGCAGATTTATCAGA +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGSVSHL*KGRFIR
Trigger: TCTGATAAATCTGCCTTTGCACAAATGTGATACTGA...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTTCAGTATCACATTTGTaGAAAGGCAGATTTATCAGA +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMASVSHL*KGRFIR
Trigger: TCTGATAAATCTGCCTTTGCACAAATGTGATACTGA...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTCAGAGATCCAATATGTaGCTATCCATAATGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATQRSNM*LSIMKS
Trigger: ACTCTTCATTATGGATAGGCACATATTGGATCTCTG...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACCAGAGATCCAATATGTaGCTATCCATAATGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNQRSNM*LSIMKS
Trigger: ACTCTTCATTATGGATAGGCACATATTGGATCTCTG...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCAGAGATCCAATATGTaGCTATCCATAATGAAGAGT +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVQRSNM*LSIMKS
Trigger: ACTCTTCATTATGGATAGGCACATATTGGATCTCTG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp AACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATGTAAAAGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: NTGDKKDLDPILYHVNVKAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...TTTTACATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTAGTTCGATAACGCCTTaGTCCTCTTCCTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: HNLIFQGIVPVKCCITATSSITP*SSSFNF
Trigger: AAAATTAAAGGAAGAGGACCAAGGCGTTATCGAACT...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTAGTTCGATAACGCCTTaGTCCTCTTCCTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVSSITP*SSSFNF
Trigger: AAAATTAAAGGAAGAGGACCAAGGCGTTATCGAACT...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAATTATCCCTAATGTaGGTTTGTGGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFQLSLM*VCGQSL
Trigger: TAGAGACTGACCACAAACCCACATTAGGGATAATTG...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCCAATTATCCCTAATGTaGGTTTGTGGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSQLSLM*VCGQSL
Trigger: TAGAGACTGACCACAAACCCACATTAGGGATAATTG...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAATTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKLVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000679107.1
CDS-3UTR TCA 90 bp GTACCAACATACAGAAGCTGCTTAAGAAAGAGAATATATAATTCAATGCCTGCATTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: VPTYRSCLRKRIYNSMPALVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...TGCAGGCATTGAATTATATATTCTCTTTCTTAAGCAGCTTCTGTATGTTGGTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR TCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATTTGGTTTCGTTGTTATaGAGAACTGTGAACCATTTG +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHLVSLL*RTVNHL
Trigger: CAAATGGTTCACAGTTCTTCATAACAACGAAACCAA...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000679107.1
CDS-3UTR TCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCCTACTCCAACCTTGTTaGCGGAATTTTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCLLQPC*RNFLIH
Trigger: ATGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAG...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR TCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAACTACTCCAACCTTGTTaGCGGAATTTTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKLLQPC*RNFLIH
Trigger: ATGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAG...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AAATCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCTTCACTCTCACTAGATaGACTCTTCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KSIHISWIFCWEVPTYRSFTLTR*TLLAFL
Trigger: AAGAAAAGCAAGAAGAGTGCATCTAGTGAGAGTGAA...GCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAATTCACTCTCACTAGATaGACTCTTCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKFTLTR*TLLAFL
Trigger: AAGAAAAGCAAGAAGAGTGCATCTAGTGAGAGTGAA...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCATTCACTCTCACTAGATaGACTCTTCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPFTLTR*TLLAFL
Trigger: AAGAAAAGCAAGAAGAGTGCATCTAGTGAGAGTGAA...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCTATTGGCTAATTGTTaGAACACAGTAATGCATACA +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVLLANC*NTVMHT
Trigger: TGTATGCATTACTGTGTTGCAACAATTAGCCAATAG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAAAGCTTTTGCAACAATaGATTGCAACCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIKLLQQ*IATIPN
Trigger: ATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTT...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFRNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSRNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCAGAAACACAAGCTTTTaGAACAATGCATTGCAACCA +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCRNTSF*NNALQP
Trigger: TGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIRLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAATAGTTCCTGTCAAATaGTGTATAACAGCAACTCAA +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQIVPVK*CITATQ
Trigger: TTGAGTTGCTGTTATACAGCATTTGACAGGAACTAT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATCAGTATCACATTTGTaGAAAGGCAGATTTATCAGA +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQSVSHL*KGRFIR
Trigger: TCTGATAAATCTGCCTTTGCACAAATGTGATACTGA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAACAGAGATCCAATATGTaGCTATCCATAATGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKQRSNM*LSIMKS
Trigger: ACTCTTCATTATGGATAGGCACATATTGGATCTCTG...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCGCTGCATCTGTTTTCTaGTTTTCAATCTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCAASVF*FSISLT
Trigger: TGTAAGAGAGATTGAAAACCAGAAAACAGATGCAGC...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCAGTTCGATAACGCCTTaGTCCTCTTCCTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCSSITP*SSSFNF
Trigger: AAAATTAAAGGAAGAGGACCAAGGCGTTATCGAACT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCAGTTCGATAACGCCTTaGTCCTCTTCCTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSSSITP*SSSFNF
Trigger: AAAATTAAAGGAAGAGGACCAAGGCGTTATCGAACT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: MVITLFILQQLPQRQIYQKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATCTATTGGCTAATTGTTaGAACACAGTAATGCATACA +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHLLANC*NTVMHT
Trigger: TGTATGCATTACTGTGTTGCAACAATTAGCCAATAG...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCTATTGGCTAATTGTTaGAACACAGTAATGCATACA +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFLLANC*NTVMHT
Trigger: TGTATGCATTACTGTGTTGCAACAATTAGCCAATAG...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCCTATTGGCTAATTGTTaGAACACAGTAATGCATACA +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCLLANC*NTVMHT
Trigger: TGTATGCATTACTGTGTTGCAACAATTAGCCAATAG...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCCTATTGGCTAATTGTTaGAACACAGTAATGCATACA +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSLLANC*NTVMHT
Trigger: TGTATGCATTACTGTGTTGCAACAATTAGCCAATAG...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAAAGCTTTTGCAACAATaGATTGCAACCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKKLLQQ*IATIPN
Trigger: ATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCAAGCTTTTGCAACAATaGATTGCAACCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSKLLQQ*IATIPN
Trigger: ATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCAAGCTTTTGCAACAATaGATTGCAACCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCKLLQQ*IATIPN
Trigger: ATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAAGCTTTTGCAACAATaGATTGCAACCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPKLLQQ*IATIPN
Trigger: ATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: YTIHSATATTTPNISILHRLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPRLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFRLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAAGGTTATTAGGACCCTaGTTCTGTGTAATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKRLLGP*FCVIKR
Trigger: TCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCATAGTTCCTGTCAAATaGTGTATAACAGCAACTCAA +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSIVPVK*CITATQ
Trigger: TTGAGTTGCTGTTATACAGCATTTGACAGGAACTAT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAATAGTTCCTGTCAAATaGTGTATAACAGCAACTCAA +
Preference number: 4 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPIVPVK*CITATQ
Trigger: TTGAGTTGCTGTTATACAGCATTTGACAGGAACTAT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR GCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAATCAGTATCACATTTGTaGAAAGGCAGATTTATCAGA +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKSVSHL*KGRFIR
Trigger: TCTGATAAATCTGCCTTTGCACAAATGTGATACTGA...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CCA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAAAATTAGGATGCTATTaGCTAATTGTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKKLGCY*LIVATQ
Trigger: CTGTGTTGCAACAATTAGCCAATAGCATCCTAATTT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS GCA 90 bp GGCTCGACTGCAAGCCTTCTCCTTCTGCAACAGCGGCAAAGGCACTaGTGCGGTCCTCAGGGACTTCCTCTGGGCCCAAGCAGCCCCGAT +
Preference number: 5 (lower is better)
Translates to: GSTASLLLLQQRQRH*CGPQGLPLGPSSPD
Trigger: ATCGGGGCTGCTTGGGCCCAGAGGAAGTCCCTGAGGACCGCAGCAGTGCCTTTGCCGCTGTTGCAGAAGGAGAAGGCTTGCAGTCGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679107.1
CDS GCA 90 bp TCGACTGCAAGCCTTCTCCTTCTGCAACAGCGGCAAAGGCACTGCTaGGGTCCTCAGGGACTTCCTCTGGGCCCAAGCAGCCCCGATACC +
Preference number: 5 (lower is better)
Translates to: STASLLLLQQRQRHC*GPQGLPLGPSSPDT
Trigger: GGTATCGGGGCTGCTTGGGCCCAGAGGAAGTCCCTGAGGACCGCAGCAGTGCCTTTGCCGCTGTTGCAGAAGGAGAAGGCTTGCAGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679107.1
CDS CCA 90 bp TGCAACAGCGGCAAAGGCACTGCTGCGGTCCTCAGGGACTTCCTCTaGGCCCAAGCAGCCCCGATACCTCGAGGGAAAGACGGTAAACCC +
Preference number: 5 (lower is better)
Translates to: CNSGKGTAAVLRDFL*AQAAPIPRGKDGKP
Trigger: GGGTTTACCGTCTTTCCCTCGAGGTATCGGGGCTGCTTGGGCCCAGAGGAAGTCCCTGAGGACCGCAGCAGTGCCTTTGCCGCTGTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679107.1
CDS-3UTR CAA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGGCTCACTATGGGCAGTaGTGCCAGTCAATGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQAHYGQ*CQSMLY
Trigger: GTACAGCATTGACTGGCACAACTGCCCATAGTGAGC...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: EYPYLRKRFASCICFLVFTSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417938.2
ENST00000678721.1
CDS-3UTR CAA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCAATAGGCCAAAGACTTaGCACTTGCCCGAATCCACT +
Preference number: 5 (lower is better)
Translates to: EYPYLRKRFASCICFLVFNRPKT*HLPEST
Trigger: AGTGGATTCGGGCAAGTGCAAAGTCTTTGGCCTATT...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678721.1
CDS-3UTR CAA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: EYPYLRKRFASCICFLVFRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417938.2
ENST00000678721.1
CDS-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKATSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKALCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCAAAGGAAAGGACCATTaGAGCCGTGTGCTATTCAGA +
Preference number: 5 (lower is better)
Translates to: EYPYLRKRFASCICFLVFKGKDH*SRVLFR
Trigger: TCTGAATAGCACACGGCTCAAATGGTCCTTTCCTTT...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678721.1
CDS-3UTR CAA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260970.8
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: EYPYLRKRFASCICFLVFNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417938.2
ENST00000678721.1
CDS-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACACCAAAGACTTTGCACTaGCCCGAATCCACTGAAGGC +
Preference number: 5 (lower is better)
Translates to: QISYGRYLKYLLVKANPTPKTLH*PESTEG
Trigger: GCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTGG...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTACCAAAGACTTTGCACTaGCCCGAATCCACTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLPKTLH*PESTEG
Trigger: GCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTGG...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCTGCTCTGGGTCCGGTCCTTaGAAGCGCTTCAAATCTACC +
Preference number: 5 (lower is better)
Translates to: SIHISWIFCWEVPTYRSCSGSGP*KRFKST
Trigger: GGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAGA...GCAGCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTACTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLLCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGTCCATGCATCAGGCATCAGTATCACATTaGTGCAAAGGCAGATTTATC +
Preference number: 5 (lower is better)
Translates to: LPLGTNIKGHSAKPSMHQASVSH*CKGRFI
Trigger: GATAAATCTGCCTTTGCACAAATGTGATACTGATGC...CTGATGCATGGACGGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GAGTATCCGTACCTCCGCAAACGGTTTGCTAGCTGCATCTGTTTTCTGGTTTTCGAGGAGTTGGTTTCGTaGTTCTTTTGGAAATCATCA +
Preference number: 5 (lower is better)
Translates to: EYPYLRKRFASCICFLVFEELVS*FFWKSS
Trigger: TGATGATTTCCAAAAGAACAACGAAACCAACTCCTC...GAAAACCAGAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGTACGGATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678721.1
CDS-3UTR CAA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: IMRNTSFCNNALQPFQMATSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTCTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: IMRNTSFCNNALQPFQMALCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCCTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGLCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCGCATTTTCTTGCCATTaGGAACTCACAGCTATGAGA +
Preference number: 5 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAAFSCH*ELTAMR
Trigger: TCTCATAGCTGTGAGTTCCAAATGGCAAGAAAATGC...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAGCTCACTATGGGCAGTaGTGCCAGTCAATGCTGTAC +
Preference number: 5 (lower is better)
Translates to: MVITLFILQQLPQRQIYQAHYGQ*CQSMLY
Trigger: GTACAGCATTGACTGGCACAACTGCCCATAGTGAGC...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACGCTCACTATGGGCAGTaGTGCCAGTCAATGCTGTAC +
Preference number: 5 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNAHYGQ*CQSMLY
Trigger: GTACAGCATTGACTGGCACAACTGCCCATAGTGAGC...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTGCTCACTATGGGCAGTaGTGCCAGTCAATGCTGTAC +
Preference number: 5 (lower is better)
Translates to: HNLIFQGIVPVKCCITATAHYGQ*CQSMLY
Trigger: GTACAGCATTGACTGGCACAACTGCCCATAGTGAGC...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAAATAGGCCAAAGACTTaGCACTTGCCCGAATCCACT +
Preference number: 5 (lower is better)
Translates to: QISYGRYLKYLLVKANPTNRPKT*HLPEST
Trigger: AGTGGATTCGGGCAAGTGCAAAGTCTTTGGCCTATT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAAATAGGCCAAAGACTTaGCACTTGCCCGAATCCACT +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLNRPKT*HLPEST
Trigger: AGTGGATTCGGGCAAGTGCAAAGTCTTTGGCCTATT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCTCCCTACTCCAACCTaGTTGACGGAATTTTCTTAT +
Preference number: 5 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKALPTPT*LTEFSY
Trigger: ATAAGAAAATTCCGTCAACAAGGTTGGAGTAGGGAG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCTCTGGGTCCGGTCCTTaGAAGCGCTTCAAATCTACC +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFSGSGP*KRFKST
Trigger: GGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAGA...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000678088.1
ENST00000678721.1
CDS-3UTR CAA 90 bp AAATCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCTCTGGGTCCGGTCCTTaGAAGCGCTTCAAATCTACC +
Preference number: 5 (lower is better)
Translates to: KSIHISWIFCWEVPTYRSSGSGP*KRFKST
Trigger: GGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAGA...GCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTCTGGGTCCGGTCCTTaGAAGCGCTTCAAATCTACC +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSSGSGP*KRFKST
Trigger: GGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAGA...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000678088.1
ENST00000678721.1
CDS-3UTR CAA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATTCTGGGTCCGGTCCTTaGAAGCGCTTCAAATCTACC +
Preference number: 5 (lower is better)
Translates to: YTIHSATATTTPNISILHSGSGP*KRFKST
Trigger: GGTAGATTTGAAGCGCTTCAAAGGACCGGACCCAGA...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000678088.1
ENST00000678721.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: QISYGRYLKYLLVKANPTVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCTGACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: IYSYLMDFLLGSTNIQKLTSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...CAGCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp TTTAACAAGAATAGAGATACAGTGATTGCCAAGAAACACGGGAGACAAGAAAGAACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: FNKNRDTVIAKKHGRQERTSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...TCTTTCTTGTCTCCCGTGTTTCTTGGCAATCACTGTATCTCTATTCTTGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462903.6
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFITSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNTSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVLCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAGCTCACTATGGGCAGTaGTGCCAGTCAATGCTGTAC +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKAHYGQ*CQSMLY
Trigger: GTACAGCATTGACTGGCACAACTGCCCATAGTGAGC...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATCCAAAGACTTTGCACTaGCCCGAATCCACTGAAGGC +
Preference number: 5 (lower is better)
Translates to: YTIHSATATTTPNISILHPKTLH*PESTEG
Trigger: GCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTGG...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCCAAAGACTTTGCACTaGCCCGAATCCACTGAAGGC +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFPKTLH*PESTEG
Trigger: GCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTGG...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCCCAAAGACTTTGCACTaGCCCGAATCCACTGAAGGC +
Preference number: 5 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCPKTLH*PESTEG
Trigger: GCCTTCAGTGGATTCGGGCAAGTGCAAAGTCTTTGG...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCCCTACTCCAACCTTGTaGACGGAATTTTCTTATTCA +
Preference number: 5 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAPTPTL*TEFSYS
Trigger: TGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAGG...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: IMRNTSFCNNALQPFQMARTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AAGAAACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATGTAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: KKHGRQERPRSHFIPCKCRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...ACATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKTSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSTSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAACCTCCGCAAACGGTTaGCTAGCTGCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPTSANG*LAASVF
Trigger: GAAAACAGATGCAGCTAGCAAACCGTTTGCGGAGGT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATCTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: DACADPEVQLMLFNHFKNLCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCCTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSLCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCCTCTGTCATGGGTTCTaGATCGCACTCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCLCHGF*IALFCF
Trigger: GAAGCAGAAGAGTGCGATCAAGAACCCATGACAGAG...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 5 (lower is better)
Translates to: QISYGRYLKYLLVKANPTEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAGCATTTTCTTGCCATTaGGAACTCACAGCTATGAGA +
Preference number: 5 (lower is better)
Translates to: QISYGRYLKYLLVKANPTAFSCH*ELTAMR
Trigger: TCTCATAGCTGTGAGTTCCAAATGGCAAGAAAATGC...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCAAAGGAAAGGACCATTaGAGCCGTGTGCTATTCAGA +
Preference number: 5 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGKGKDH*SRVLFR
Trigger: TCTGAATAGCACACGGCTCAAATGGTCCTTTCCTTT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTTAGCTCCATACCTTCCACTAGGCACAAATATCAAAGGTCATTCCGCAAAGCCTATCAGATAAATTCTTaGCAACTTCTGAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: FSSIPSTRHKYQRSFRKAYQINS*QLLRAS
Trigger: TGAAGCCCTCAGAAGTTGCAAAGAATTTATCTGATA...GGCTTTGCGGAATGACCTTTGATATTTGTGCCTAGTGGAAGGTATGGAGCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACACTCCCTACTCCAACCTaGTTGACGGAATTTTCTTAT +
Preference number: 5 (lower is better)
Translates to: QISYGRYLKYLLVKANPTLPTPT*LTEFSY
Trigger: ATAAGAAAATTCCGTCAACAAGGTTGGAGTAGGGAG...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAAGAGCGGCCACAATTTaGTACATCCCACATACAAAT +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLRAATI*YIPHTN
Trigger: ATTTGTATGTGGGATGTACAAAATTGTGGCCGCTCT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AAGAAACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATGTAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: KKHGRQERPRSHFIPCKCNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...ACATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp ATCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCTGGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: IYSYLMDFLLGSTNIQKLVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...CAGCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp AACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATGTAAAAGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: NTGDKKDLDPILYHVNVKVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...TTTTACATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: HNLIFQGIVPVKCCITATVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: MVITLFILQQLPQRQIYQVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATGTAAAAAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: NTGDKKDLDPILYHVNVKRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...TTTTACATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 5 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 5 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: MVITLFILQQLPQRQIYQIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTAAAGGAAAGGACCATTaGAGCCGTGTGCTATTCAGA +
Preference number: 5 (lower is better)
Translates to: HNLIFQGIVPVKCCITATKGKDH*SRVLFR
Trigger: TCTGAATAGCACACGGCTCAAATGGTCCTTTCCTTT...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTAAAGGAAAGGACCATTaGAGCCGTGTGCTATTCAGA +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVKGKDH*SRVLFR
Trigger: TCTGAATAGCACACGGCTCAAATGGTCCTTTCCTTT...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAGCATCAGTATCACATTaGTGCAAAGGCAGATTTATC +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLASVSH*CKGRFI
Trigger: GATAAATCTGCCTTTGCACAAATGTGATACTGATGC...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATAATAGGCCAAAGACTTaGCACTTGCCCGAATCCACT +
Preference number: 5 (lower is better)
Translates to: YTIHSATATTTPNISILHNRPKT*HLPEST
Trigger: AGTGGATTCGGGCAAGTGCAAAGTCTTTGGCCTATT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATAGGCCAAAGACTTaGCACTTGCCCGAATCCACT +
Preference number: 5 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPNRPKT*HLPEST
Trigger: AGTGGATTCGGGCAAGTGCAAAGTCTTTGGCCTATT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCAATAGGCCAAAGACTTaGCACTTGCCCGAATCCACT +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSNRPKT*HLPEST
Trigger: AGTGGATTCGGGCAAGTGCAAAGTCTTTGGCCTATT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTACCTACTCCAACCTTGTaGACGGAATTTTCTTATTCA +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLPTPTL*TEFSYS
Trigger: TGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAGG...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TCTATTCATATCTCATGGATTTTCTGTTGGGAAGTACCAACATACAGAAGCTGCCTCATGGATTTTCTGTaGGGAAGTACCAACATACAG +
Preference number: 5 (lower is better)
Translates to: SIHISWIFCWEVPTYRSCLMDFL*GSTNIQ
Trigger: CTGTATGTTGGTACTTCCCAACAGAAAATCCATGAG...GCAGCTTCTGTATGTTGGTACTTCCCAACAGAAAATCCATGAGATATGAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp AACACGGGAGACAAGAAAGACCTCGATCCCATTTTATACCATGTAAATGTAAAAAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: NTGDKKDLDPILYHVNVKNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...TTTTACATTTACATGGTATAAAATGGGATCGAGGTCTTTCTTGTCTCCCGTGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: HNLIFQGIVPVKCCITATNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260970.8
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCGTAATGGTTTCTGAGTaGATTTCCCGGTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCVMVSE*ISRSPF
Trigger: AAAAGGGGACCGGGAAATCAACTCAGAAACCATTAC...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: DACADPEVQLMLFNHFKNRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCAGAACTGTGAACCATTaGTATCCTTCCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFRTVNH*YPSLCW
Trigger: CCAACAGAGGGAAGGATACAAATGGTTCACAGTTCT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 5 (lower is better)
Translates to: MVITLFILQQLPQRQIYQEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTGAGAAACACAAGCTTTaGCAACAATGCATTGCAACC +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVEKHKL*QQCIAT
Trigger: GGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTC...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTGCATTTTCTTGCCATTaGGAACTCACAGCTATGAGA +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVAFSCH*ELTAMR
Trigger: TCTCATAGCTGTGAGTTCCAAATGGCAAGAAAATGC...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTGCATTTTCTTGCCATTaGGAACTCACAGCTATGAGA +
Preference number: 5 (lower is better)
Translates to: HNLIFQGIVPVKCCITATAFSCH*ELTAMR
Trigger: TCTCATAGCTGTGAGTTCCAAATGGCAAGAAAATGC...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATATACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAATCCCTAATGTGGGTTaGTGGTCAGTCTCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPIPNVG*WSVSKE
Trigger: TTCCTTAGAGACTGACCACAAACCCACATTAGGGAT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAATAACGTTATATAGCTaGGGCACTCAGACTCAATTA +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLITLYS*GTQTQL
Trigger: TAATTGAGTCTGAGTGCCCAAGCTATATAACGTTAT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACATATCAGATAAATTCTTaGCAACTTCTGAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: QISYGRYLKYLLVKANPTYQINS*QLLRAS
Trigger: TGAAGCCCTCAGAAGTTGCAAAGAATTTATCTGATA...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACCTCCCTACTCCAACCTaGTTGACGGAATTTTCTTAT +
Preference number: 5 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNLPTPT*LTEFSY
Trigger: ATAAGAAAATTCCGTCAACAAGGTTGGAGTAGGGAG...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AGGTTATTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTAATACAGCATGTGCTTTaGGTAACATATGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: RLLGPCFCVIKRNRCKPLIQHVL*VTYGIC
Trigger: GCAAATTCCATATGTTACCAAAAGCACATGCTGTAT...TAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAATAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CAAATCAGCTATGGTAGGTATTTAAAGTACCTTCTGGTGAAGGCAAACCCAACAATACAGCATGTGCTTTaGGTAACATATGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: QISYGRYLKYLLVKANPTIQHVL*VTYGIC
Trigger: GCAAATTCCATATGTTACCAAAAGCACATGCTGTAT...TGTTGGGTTTGCCTTCACCAGAAGGTACTTTAAATACCTACCATAGCTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACAGAGCGGCCACAATTTaGTACATCCCACATACAAAT +
Preference number: 5 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNRAATI*YIPHTN
Trigger: ATTTGTATGTGGGATGTACAAAATTGTGGCCGCTCT...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAAGAGCGGCCACAATTTaGTACATCCCACATACAAAT +
Preference number: 5 (lower is better)
Translates to: MVITLFILQQLPQRQIYQRAATI*YIPHTN
Trigger: ATTTGTATGTGGGATGTACAAAATTGTGGCCGCTCT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCAACTCTTCCAGCAGGTaGATTGTTAATGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFNSSSR*IVNGNV
Trigger: GACATTGCCATTAACAATCAACCTGCTGGAAGAGTT...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATATTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp CACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTTTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: HNLIFQGIVPVKCCITATFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...AGTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATTACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 5 (lower is better)
Translates to: YTIHSATATTTPNISILHYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAATACCAAGAAGCTACCTaGGTAACAGAGTTGACACTA +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKYQEAT*VTELTL
Trigger: TAGTGTCAACTCTGTTACCAAGGTAGCTTCTTGGTA...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTGCATCAGTATCACATTaGTGCAAAGGCAGATTTATC +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVASVSH*CKGRFI
Trigger: GATAAATCTGCCTTTGCACAAATGTGATACTGATGC...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATAGCATCAGTATCACATTaGTGCAAAGGCAGATTTATC +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIASVSH*CKGRFI
Trigger: GATAAATCTGCCTTTGCACAAATGTGATACTGATGC...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATACCTACTCCAACCTTGTaGACGGAATTTTCTTATTCA +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIPTPTL*TEFSYS
Trigger: TGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAGG...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCTCCCTACTCCAACCTaGTTGACGGAATTTTCTTAT +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFLPTPT*LTEFSY
Trigger: ATAAGAAAATTCCGTCAACAAGGTTGGAGTAGGGAG...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCCTCCCTACTCCAACCTaGTTGACGGAATTTTCTTAT +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSLPTPT*LTEFSY
Trigger: ATAAGAAAATTCCGTCAACAAGGTTGGAGTAGGGAG...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCTATACAGCATGTGCTTTaGGTAACATATGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: IMRNTSFCNNALQPFQMAIQHVL*VTYGIC
Trigger: GCAAATTCCATATGTTACCAAAAGCACATGCTGTAT...AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATGGCATACAGCATGTGCTTTaGGTAACATATGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: NHEKHKLLQQCIATIPNGIQHVL*VTYGIC
Trigger: GCAAATTCCATATGTTACCAAAAGCACATGCTGTAT...GCCATTTGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAAGAGCGGCCACAATTTaGTACATCCCACATACAAAT +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKRAATI*YIPHTN
Trigger: ATTTGTATGTGGGATGTACAAAATTGTGGCCGCTCT...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAGAGCGGCCACAATTTaGTACATCCCACATACAAAT +
Preference number: 5 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPRAATI*YIPHTN
Trigger: ATTTGTATGTGGGATGTACAAAATTGTGGCCGCTCT...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTACCAACATACAGAAGCTGCTTAAGAAAGAGAATATATAATTCAATGCCTGCACTCATGGATTTTCTGTaGGGAAGTACCAACATACAG +
Preference number: 5 (lower is better)
Translates to: VPTYRSCLRKRIYNSMPALMDFL*GSTNIQ
Trigger: CTGTATGTTGGTACTTCCCAACAGAAAATCCATGAG...TGCAGGCATTGAATTATATATTCTCTTTCTTAAGCAGCTTCTGTATGTTGGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414307.6
ENST00000462903.6
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATACAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACCAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 5 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCTTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCTTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAATTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GATGCATGCGCAGATCCTGAGGTACAGTTAATGCTGTTTAATCATTTTAAAAATTTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: DACADPEVQLMLFNHFKNFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...ATTTTTAAAATGATTAAACAGCATTAACTGTACCTCAGGATCTGCGCATGCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATaGCAACCATTCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSFCNNA*QPFQMA
Trigger: AGCCATTTGGAATGGTTGCAATGCATTGTTGCAAAA...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTATAACGTTATATAGCTaGGGCACTCAGACTCAATTA +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVITLYS*GTQTQL
Trigger: TAATTGAGTCTGAGTGCCCAAGCTATATAACGTTAT...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATAGTTAAACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTCATGGAGTTGCTCTTTaGATAACCCAAACAGAATAT +
Preference number: 5 (lower is better)
Translates to: IVKHSTQYYTKVFFSCRVHGVAL*ITQTEY
Trigger: ATATTCTGTTTGGGTTATCAAAAGAGCAACTCCATG...AACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTTTAACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATACATGGAGTTGCTCTTTaGATAACCCAAACAGAATAT +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIHGVAL*ITQTEY
Trigger: ATATTCTGTTTGGGTTATCAAAAGAGCAACTCCATG...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TTAGGACCCTGCTTCTGTGTAATTAAAAGAAACCGCTGCAAACCTCTATTTATATATCAGATAAATTCTTaGCAACTTCTGAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LGPCFCVIKRNRCKPLFIYQINS*QLLRAS
Trigger: TGAAGCCCTCAGAAGTTGCAAAGAATTTATCTGATA...TATAAATAGAGGTTTGCAGCGGTTTCTTTTAATTACACAGAAGCAGGGTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TCACAATCTGATTTTCCAAGGTATAGTTCCTGTCAAATGCTGTATAACAGCAACTATCAGATAAATTCTTaGCAACTTCTGAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: SQSDFPRYSSCQMLYNSNYQINS*QLLRAS
Trigger: TGAAGCCCTCAGAAGTTGCAAAGAATTTATCTGATA...GTTGCTGTTATACAGCATTTGACAGGAACTATACCTTGGAAAATCAGATTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATCAGATAAATTCTTaGCAACTTCTGAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: MVITLFILQQLPQRQIYQYQINS*QLLRAS
Trigger: TGAAGCCCTCAGAAGTTGCAAAGAATTTATCTGATA...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCGCATCAGTATCACATTaGTGCAAAGGCAGATTTATC +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFASVSH*CKGRFI
Trigger: GATAAATCTGCCTTTGCACAAATGTGATACTGATGC...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAAGCATCAGTATCACATTaGTGCAAAGGCAGATTTATC +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKASVSH*CKGRFI
Trigger: GATAAATCTGCCTTTGCACAAATGTGATACTGATGC...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCCTACTCCAACCTTGTaGACGGAATTTTCTTATTCA +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFPTPTL*TEFSYS
Trigger: TGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAGG...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCCCTACTCCAACCTTGTaGACGGAATTTTCTTATTCA +
Preference number: 5 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCPTPTL*TEFSYS
Trigger: TGAATAAGAAAATTCCGTCAACAAGGTTGGAGTAGG...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ATGGTCATTACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAAATACAGCATGTGCTTTaGGTAACATATGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: MVITLFILQQLPQRQIYQIQHVL*VTYGIC
Trigger: GCAAATTCCATATGTTACCAAAAGCACATGCTGTAT...TTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTAATGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCCAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCACAAATTAGGATGCTATaGGCTAATTGTTGCAACACA +
Preference number: 5 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPQIRML*ANCCNT
Trigger: TGTGTTGCAACAATTAGCCAATAGCATCCTAATTTG...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260970.8
ENST00000433207.6
ENST00000448752.7
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678638.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATATAACGTTATATAGCTaGGGCACTCAGACTCAATTA +
Preference number: 5 (lower is better)
Translates to: YTIHSATATTTPNISILHITLYS*GTQTQL
Trigger: TAATTGAGTCTGAGTGCCCAAGCTATATAACGTTAT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp AACACAGCACACAGTACTACACCAAAGTGTTTTTCTCATGTCGAGTTTATTAAACATGGAGTTGCTCTTTaGATAACCCAAACAGAATAT +
Preference number: 5 (lower is better)
Translates to: NTAHSTTPKCFSHVEFIKHGVAL*ITQTEY
Trigger: ATATTCTGTTTGGGTTATCAAAAGAGCAACTCCATG...TTTAATAAACTCGACATGAGAAAAACACTTTGGTGTAGTACTGTGTGCTGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp ACAAGATGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCCATGGAGTTGCTCTTTaGATAACCCAAACAGAATAT +
Preference number: 5 (lower is better)
Translates to: TRCLLVASKVTLIMRNTSHGVAL*ITQTEY
Trigger: ATATTCTGTTTGGGTTATCAAAAGAGCAACTCCATG...GCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACATCTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCCACATGGAGTTGCTCTTTaGATAACCCAAACAGAATAT +
Preference number: 5 (lower is better)
Translates to: YFNHEKHKLLQQCIATIPHGVAL*ITQTEY
Trigger: ATATTCTGTTTGGGTTATCAAAAGAGCAACTCCATG...TGGAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp GTTACTTTAATCATGAGAAACACAAGCTTTTGCAACAATGCATTGCAACCATTCTATCAGATAAATTCTTaGCAACTTCTGAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: VTLIMRNTSFCNNALQPFYQINS*QLLRAS
Trigger: TGAAGCCCTCAGAAGTTGCAAAGAATTTATCTGATA...GAATGGTTGCAATGCATTGTTGCAAAAGCTTGTGTTTCTCATGATTAAAGTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TGTCTTCTAGTGGCTTCTAAAGTTACTTTAATCATGAGAAACACAAGCTTTTGCATACAGCATGTGCTTTaGGTAACATATGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: CLLVASKVTLIMRNTSFCIQHVL*VTYGIC
Trigger: GCAAATTCCATATGTTACCAAAAGCACATGCTGTAT...GCAAAAGCTTGTGTTTCTCATGATTAAAGTAACTTTAGAAGCCACTAGAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS-3UTR CAA 90 bp TACACTATTCATTCTGCAACAGCTACCACAACGCCAAATATATCAATATTGCATATACAGCATGTGCTTTaGGTAACATATGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: YTIHSATATTTPNISILHIQHVL*VTYGIC
Trigger: GCAAATTCCATATGTTACCAAAAGCACATGCTGTAT...ATGCAATATTGATATATTTGGCGTTGTGGTAGCTGTTGCAGAATGAATAGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260970.8
ENST00000676508.1
ENST00000676756.1
ENST00000678088.1
ENST00000678499.1
ENST00000678721.1
ENST00000679107.1
CDS GCA 72 bp GCAAGCCTTCTCCTTCTGCAACAGCGGCAAAGGCACTaGTGCGGTCCTCAGGGACTTCCTCTGGGCCCAAGC +
Preference number: 6 (lower is better)
Translates to: ASLLLLQQRQRH*CGPQGLPLGPS
Trigger: GCTTGGGCCCAGAGGAAGTCCCTGAGGACCGCAGCAGTGCCTTTGCCGCTGTTGCAGAAGGAGAAGGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679107.1
CDS CCA 72 bp AATTATCCTAATTTGGCTAGTGGGAAACCTTTAACCTaGCTCCTGTGTTCTCTTGACAAGTCTCCATTATTT +
Preference number: 6 (lower is better)
Translates to: NYPNLASGKPLT*LLCSLDKSPLF
Trigger: AAATAATGGAGACTTGTCAAGAGAACACAGGAGCCAGGTTAAAGGTTTCCCACTAGCCAAATTAGGATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676557.1
CDS CCA 72 bp GAGATCCACATTATGTGCAATTGGTTGAATAAACTATaGTATACACAAACAATAGAGTACTATGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: EIHIMCNWLNKL*YTQTIEYYAAA
Trigger: TGCAGCTGCATAGTACTCTATTGTTTGTGTATACCATAGTTTATTCAACCAATTGCACATAATGTGGATCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676557.1
CDS CAA 72 bp AATCACCCCTCTAAATTTAGCATCAATAGAAGATTCTaGCCTGGGTCAGTCATTACTGTGATGATTACAAAA +
Preference number: 6 (lower is better)
Translates to: NHPSKFSINRRF*PGSVITVMITK
Trigger: TTTTGTAATCATCACAGTAATGACTGACCCAGGCAAGAATCTTCTATTGATGCTAAATTTAGAGGGGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676557.1
CDS TCA 72 bp TTTTCTAACTCCACCATTCCGTTTAAATTTATTAGTTaGCATTCTAATAAGGGAACAGCTTCCCTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: FSNSTIPFKFIS*HSNKGTASLLS
Trigger: AGAGAGAAGGGAAGCTGTTCCCTTATTAGAATGTCAACTAATAAATTTAAACGGAATGGTGGAGTTAGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676557.1
CDS TCA 72 bp TACGGAGAAATACTCTGTAAACATCTAGTTTCTCACTaGAATCACCCCTCTAAATTTAGCATCAATAGAAGA +
Preference number: 6 (lower is better)
Translates to: YGEILCKHLVSH*NHPSKFSINRR
Trigger: TCTTCTATTGATGCTAAATTTAGAGGGGTGATTTCAGTGAGAAACTAGATGTTTACAGAGTATTTCTCCGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676557.1
CDS CAA 72 bp CACTTAACAGACAGAAACACACAAAACAAGTTACAGTaGGTTATTATGTCCTTACGGAAGTATCCAATTGTT +
Preference number: 6 (lower is better)
Translates to: HLTDRNTQNKLQ*VIMSLRKYPIV
Trigger: AACAATTGGATACTTCCGTAAGGACATAATAACCAACTGTAACTTGTTTTGTGTGTTTCTGTCTGTTAAGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466142.1
ENST00000677392.1
ENST00000677750.1
ENST00000678695.1
ENST00000679324.1
CDS CAA 72 bp CAAACAGAAATACAGGAAGATAAACTGGAAATTAGGTaGGTTATTAACATGTATAGATGGAACTGGGGTGAA +
Preference number: 6 (lower is better)
Translates to: QTEIQEDKLEIR*VINMYRWNWGE
Trigger: TTCACCCCAGTTCCATCTATACATGTTAATAACCAACCTAATTTCCAGTTTATCTTCCTGTATTTCTGTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676557.1