RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPIE (Homo sapiens)

Ensembl gene IDs: ENSG00000084072

Ensembl transcript IDs: ENST00000324379.10, ENST00000372835.9, ENST00000456578.6, ENST00000467741.2, ENST00000470018.5, ENST00000470213.5, ENST00000474804.5, ENST00000475350.5, ENST00000480169.1, ENST00000482751.5, ENST00000485507.5, ENST00000495526.5, ENST00000497370.5

Found 436 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGGAACCTGGGCAGCAGCAGCCCCTCCCGCTGGACACAGCCCCTaGCCATCTCTCTCAGGCCACAGAGACTCTCCAGCCCTCACACAG +
Preference number: 1 (lower is better)
Translates to: PGTWAAAAPPAGHSP*PSLSGHRDSPALTQ
Trigger: CTGTGTGAGGGCTGGAGAGTCTCTGTGGCCTGAGAGAGATGGCCAGGGGCTGTGTCCAGCGGGAGGGGCTGCTGCTGCCCAGGTTCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470213.5
3UTR GCA 90 bp GAGGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTaGGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCATGCCACTGCC +
Preference number: 1 (lower is better)
Translates to: EVRVFPRQPGAAAAW*VAEAGGQAVGHATA
Trigger: GGCAGTGGCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 90 bp ACTTCCCAGAGAGGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTaGTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCA +
Preference number: 1 (lower is better)
Translates to: TSQRGQSFPEAARCS*CMVRSRSRWPGCGA
Trigger: TGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACCTCTCTGGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 90 bp GGCTCCACTTCCCAGAGAGGTCAGAGTTTTCCCGAGGCAGCCAGGTaGAGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGCTGT +
Preference number: 1 (lower is better)
Translates to: GSTSQRGQSFPEAAR*SCCMVRSRSRWPGC
Trigger: ACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACCTCTCTGGGAAGTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp AGAGAGGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATaGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCATGCCACT +
Preference number: 1 (lower is better)
Translates to: REVRVFPRQPGAAAA*CVAEAGGQAVGHAT
Trigger: AGTGGCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp GACCAGCATCTGGAGGGGGAGTGGAGAGAAGCCAGCTCCAAGAAGTaGCTGCACACAGGAGAGCCAGACTGTGAGCTCAGCAGGGGGTGG +
Preference number: 1 (lower is better)
Translates to: DQHLEGEWREASSKK*LHTGEPDCELSRGW
Trigger: CCACCCCCTGCTGAGCTCACAGTCTGGCTCTCCTGTGTGCAGCCACTTCTTGGAGCTGGCTTCTCTCCACTCCCCCTCCAGATGCTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 90 bp GTAAGGCCGGAGACTAACAGTGGTTTAGGGATACCAACCCCTGCCTaGCCATTTGCCCACTTCCACCCCGGAACCTGGGCAGCAGCAGCC +
Preference number: 1 (lower is better)
Translates to: VRPETNSGLGIPTPA*PFAHFHPGTWAAAA
Trigger: GGCTGCTGCTGCCCAGGTTCCGGGGTGGAAGTGGGCAAATGGGCAGGCAGGGGTTGGTATCCCTAAACCACTGTTAGTCTCCGGCCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470213.5
3UTR CCA 90 bp CCTGGTGCTGGTCCAGCAATGGGAATGTGGAATGGGGAGGCCAGTTaGGACAGGAGCCACACAGTCCCAGGGAAAGCCGCTTTGCTCTCC +
Preference number: 1 (lower is better)
Translates to: PGAGPAMGMWNGEAS*DRSHTVPGKAALLS
Trigger: GGAGAGCAAAGCGGCTTTCCCTGGGACTGTGTGGCTCCTGTCCCAACTGGCCTCCCCATTCCACATTCCCATTGCTGGACCAGCACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp ACTGCAACAGATGCTGGGAGCACCTGGAGGCGGCTGTCATGCTGTTaGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: TATDAGSTWRRLSCC*RGHSNSHSTDPGPA
Trigger: GGCAGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAGCCGCCTCCAGGTGCTCCCAGCATCTGTTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 90 bp GCCATGACTGCAACAGATGCTGGGAGCACCTGGAGGCGGCTGTCATaGTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGG +
Preference number: 1 (lower is better)
Translates to: AMTATDAGSTWRRLS*CWRGHSNSHSTDPG
Trigger: CCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAGCCGCCTCCAGGTGCTCCCAGCATCTGTTGCAGTCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp CAGCAAAAGGAAGCCCTGTGCCCAGTCCTGGTGCTGGTCCAGCAATaGGAATGTGGAATGGGGAGGCCAGTTGGGACAGGAGCCACACAG +
Preference number: 1 (lower is better)
Translates to: QQKEALCPVLVLVQQ*ECGMGRPVGTGATQ
Trigger: CTGTGTGGCTCCTGTCCCAACTGGCCTCCCCATTCCACATTCCCATTGCTGGACCAGCACCAGGACTGGGCACAGGGCTTCCTTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp CACAGAGACTCTCCAGCCCTCACACAGGGCTGTGCTCCTAGGGCCTaGGTAAGGAGGAGGCCCATTCCTGGCCACATACCTCAATTTGCC +
Preference number: 1 (lower is better)
Translates to: HRDSPALTQGCAPRA*VRRRPIPGHIPQFA
Trigger: GGCAAATTGAGGTATGTGGCCAGGAATGGGCCTCCTCCTTACCCAGGCCCTAGGAGCACAGCCCTGTGTGAGGGCTGGAGAGTCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
3UTR TCA 90 bp AGGGCAGAATGCCACCATCCCTCAGCAAGAGCTATCCTAGGGTCATaGGGACCACCTAGCCTCTCCTGCCTCCTGGCTCATCCAGATCTC +
Preference number: 1 (lower is better)
Translates to: RAECHHPSARAILGS*GPPSLSCLLAHPDL
Trigger: GAGATCTGGATGAGCCAGGAGGCAGGAGAGGCTAGGTGGTCCTCATGACCCTAGGATAGCTCTTGCTGAGGGATGGTGGCATTCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 90 bp AGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTaGCCACTGGCCTCCACCTCCCCAGAGTATCAGGGAGGAACAGAG +
Preference number: 1 (lower is better)
Translates to: RSPHPMAPNLLSFQN*PLASTSPEYQGGTE
Trigger: CTCTGTTCCTCCCTGATACTCTGGGGAGGTGGAGGCCAGTGGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 90 bp TGCCCACTGGCCTCCACCTCCCCAGAGTATCAGGGAGGAACAGAGTaGCAAGGTTGTCACAGGAGTCTGTCCTTTTATGGGAGGCTGGCT +
Preference number: 1 (lower is better)
Translates to: CPLASTSPEYQGGTE*QGCHRSLSFYGRLA
Trigger: AGCCAGCCTCCCATAAAAGGACAGACTCCTGTGACAACCTTGTCACTCTGTTCCTCCCTGATACTCTGGGGAGGTGGAGGCCAGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp GAGATTCTTTATAACCGCCTGGCTGACCAGCATCTGGAGGGGGAGTaGAGAGAAGCCAGCTCCAAGAAGTGGCTGCACACAGGAGAGCCA +
Preference number: 1 (lower is better)
Translates to: EILYNRLADQHLEGE*REASSKKWLHTGEP
Trigger: TGGCTCTCCTGTGTGCAGCCACTTCTTGGAGCTGGCTTCTCTCCACTCCCCCTCCAGATGCTGGTCAGCCAGGCGGTTATAAAGAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp TCAGTCAACTGTAGCAGCTGGAGCTCACAAAGTCCAGTCGGCACATaGGAGCCAGAGGTAGGGCAGAATGCCACCATCCCTCAGCAAGAG +
Preference number: 1 (lower is better)
Translates to: SVNCSSWSSQSPVGT*EPEVGQNATIPQQE
Trigger: CTCTTGCTGAGGGATGGTGGCATTCTGCCCTACCTCTGGCTCCCATGTGCCGACTGGACTTTGTGAGCTCCAGCTGCTACAGTTGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 90 bp GTTGGTTCTATAATTCCTTCTTCAGAGGTTGCCGTGAGGCTGCCATaGCTGCAACAGATGCTGGGAGCACCTGGAGGCGGCTGTCATGCT +
Preference number: 1 (lower is better)
Translates to: VGSIIPSSEVAVRLP*LQQMLGAPGGGCHA
Trigger: AGCATGACAGCCGCCTCCAGGTGCTCCCAGCATCTGTTGCAGTCATGGCAGCCTCACGGCAACCTCTGAAGAAGGAATTATAGAACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp CTTCAGCAGATGAGATTCTTTATAACCGCCTGGCTGACCAGCATCTaGAGGGGGAGTGGAGAGAAGCCAGCTCCAAGAAGTGGCTGCACA +
Preference number: 1 (lower is better)
Translates to: LQQMRFFITAWLTSI*RGSGEKPAPRSGCT
Trigger: TGTGCAGCCACTTCTTGGAGCTGGCTTCTCTCCACTCCCCCTCCAGATGCTGGTCAGCCAGGCGGTTATAAAGAATCTCATCTGCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp TATATCCCAGCTACATGGAGCCTGAACTCAGTCAACTGTAGCAGCTaGAGCTCACAAAGTCCAGTCGGCACATGGGAGCCAGAGGTAGGG +
Preference number: 1 (lower is better)
Translates to: YIPATWSLNSVNCSS*SSQSPVGTWEPEVG
Trigger: CCCTACCTCTGGCTCCCATGTGCCGACTGGACTTTGTGAGCTCCAGCTGCTACAGTTGACTGAGTTCAGGCTCCATGTAGCTGGGATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 90 bp AGACAGGCTGGGCTTCTAATCCCAGCTCTGCCAAACCACCCTGTGTaGCCTTTGGCAGTCACGCCAATAAAGCCTCAGTTTACCTGTGCA +
Preference number: 1 (lower is better)
Translates to: RQAGLLIPALPNHPV*PLAVTPIKPQFTCA
Trigger: TGCACAGGTAAACTGAGGCTTTATTGGCGTGACTGCCAAAGGTCACACAGGGTGGTTTGGCAGAGCTGGGATTAGAAGCCCAGCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 90 bp TCCAAGATGCAAAAGCTCAGCTCAGTGGATTCTGAATGGTCTGAGTaGCCCAACCCACAGGAGGTGTCCAACAGCTACAGGACTCAGTCC +
Preference number: 1 (lower is better)
Translates to: SKMQKLSSVDSEWSE*PNPQEVSNSYRTQS
Trigger: GGACTGAGTCCTGTAGCTGTTGGACACCTCCTGTGGGTTGGGTCACTCAGACCATTCAGAATCCACTGAGCTGAGCTTTTGCATCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 90 bp CCTAGCCTCTCCTGCCTCCTGGCTCATCCAGATCTCAATCCAAGATaGAAAAGCTCAGCTCAGTGGATTCTGAATGGTCTGAGTGACCCA +
Preference number: 1 (lower is better)
Translates to: PSLSCLLAHPDLNPR*KSSAQWILNGLSDP
Trigger: TGGGTCACTCAGACCATTCAGAATCCACTGAGCTGAGCTTTTGCATCTTGGATTGAGATCTGGATGAGCCAGGAGGCAGGAGAGGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 90 bp GCAGAGGCAGCAGAAGACCGGAGCTTTCCAGTCTTTAATTTCCGTTaGCCTGACATCGATGCCTGGTGTGAAGATACATCACCTGACATC +
Preference number: 1 (lower is better)
Translates to: AEAAEDRSFPVFNFR*PDIDAWCEDTSPDI
Trigger: GATGTCAGGTGATGTATCTTCACACCAGGCATCGATGTCAGGGCAACGGAAATTAAAGACTGGAAAGCTCCGGTCTTCTGCTGCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp CTGGCTCATCCAGATCTCAATCCAAGATGCAAAAGCTCAGCTCAGTaGATTCTGAATGGTCTGAGTGACCCAACCCACAGGAGGTGTCCA +
Preference number: 1 (lower is better)
Translates to: LAHPDLNPRCKSSAQ*ILNGLSDPTHRRCP
Trigger: TGGACACCTCCTGTGGGTTGGGTCACTCAGACCATTCAGAATCCACTGAGCTGAGCTTTTGCATCTTGGATTGAGATCTGGATGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 90 bp TCCAGTGTGCATTCAATAACATCTGTGAACACCCAGGAGGAACACTaGGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTT +
Preference number: 1 (lower is better)
Translates to: SSVHSITSVNTQEEH*ERSPHPMAPNLLSF
Trigger: AAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCCCAGTGTTCCTCCTGGGTGTTCACAGATGTTATTGAATGCACACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 90 bp CACCAGCCTGCCTCAGAGGTCCAGCTTAGCCACAGACACAATCTCTaGCAACTCCCAAGAACTAGCAGGAAGAGCAATATAAGAACTAGG +
Preference number: 1 (lower is better)
Translates to: HQPASEVQLSHRHNL*QLPRTSRKSNIRTR
Trigger: CCTAGTTCTTATATTGCTCTTCCTGCTAGTTCTTGGGAGTTGTCAGAGATTGTGTCTGTGGCTAAGCTGGACCTCTGAGGCAGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 90 bp GACAAGGTTGTCACAGGAGTCTGTCCTTTTATGGGAGGCTGGCTGTaGTTTTTCTACACACTCTCTCCTGGTTCTCGTCCAAGCACTGAA +
Preference number: 1 (lower is better)
Translates to: DKVVTGVCPFMGGWL*FFYTLSPGSRPSTE
Trigger: TTCAGTGCTTGGACGAGAACCAGGAGAGAGTGTGTAGAAAAAGCACAGCCAGCCTCCCATAAAAGGACAGACTCCTGTGACAACCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 90 bp AAGCAGAGGGTCTCTGGACTAGGACATCCTACGCATAGTGAGGGCTaGGGTACCATAATGACAAATGGAGATTATGTGAAAGTTTATATA +
Preference number: 1 (lower is better)
Translates to: KQRVSGLGHPTHSEG*GTIMTNGDYVKVYI
Trigger: TATATAAACTTTCACATAATCTCCATTTGTCATTATGGTACCTCAGCCCTCACTATGCGTAGGATGTCCTAGTCCAGAGACCCTCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR TCA 90 bp TTCATTCTCCCCATGCAACCTTGTAACTTTGGAAGTCCAGAACACTaGTATATGAATAAGGAGCCTCTGTACCACCAAAAAGCAACTTTA +
Preference number: 1 (lower is better)
Translates to: FILPMQPCNFGSPEH*YMNKEPLYHQKATL
Trigger: TAAAGTTGCTTTTTGGTGGTACAGAGGCTCCTTATTCATATATCAGTGTTCTGGACTTCCAAAGTTACAAGGTTGCATGGGGAGAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000495526.5
3UTR TCA 90 bp CATAATGACAAATGGAGATTATGTGAAAGTTTATATACTGAATGTTaGGGAATTCAGCCTTGCCCTCATCTCCCCTTAACAAGATGCAGA +
Preference number: 1 (lower is better)
Translates to: HNDKWRLCESLYTEC*GIQPCPHLPLTRCR
Trigger: TCTGCATCTTGTTAAGGGGAGATGAGGGCAAGGCTGAATTCCTCAACATTCAGTATATAAACTTTCACATAATCTCCATTTGTCATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR TCA 90 bp ACTTACATGTGGATATTCACACAGGCATTTACAATAGTCAAAAGGTaGAAACAATGTGCAAGTGCCCATCAACAAATGAATGAACAAGAT +
Preference number: 1 (lower is better)
Translates to: TYMWIFTQAFTIVKR*KQCASAHQQMNEQD
Trigger: ATCTTGTTCATTCATTTGTTGATGGGCACTTGCACATTGTTTTCACCTTTTGACTATTGTAAATGCCTGTGTGAATATCCACATGTAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR-3UTR CCA 90 bp AGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCATGCCACACAGCCTGCCCATGGTaGAGGGGAGCACCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: SCCMVRSRSRWPGCGACHTACPW*RGAPEL
Trigger: CAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGT...GTGGCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAGGCTCCCCTCCCTTCTaGCCTGGAAGAGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRGSPPF*PGRAGS
Trigger: AGACCCTGCTCTTCCAGGCCAGAAGGGAGGGGAGCC...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR GCA 90 bp AGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCATGCCACGTTCCTTCCTGGATATaGAGGGTCAAGAGCGGAGGG +
Preference number: 2 (lower is better)
Translates to: SCCMVRSRSRWPGCGACHVPSWI*RVKSGG
Trigger: CCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC...GTGGCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CCA 90 bp GACACTCCAACAGCCACAGCACTGATCCTGGGCCTGCCATCCCTGGTTTCAGCCTGGCTGACCAGCATCTaGAGGGGGAGTGGAGAGAAG +
Preference number: 2 (lower is better)
Translates to: DTPTATALILGLPSLVSAWLTSI*RGSGEK
Trigger: CTTCTCTCCACTCCCCCTCCAGATGCTGGTCAGCCA...GGCTGAAACCAGGGATGGCAGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR GCA 90 bp GCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCTCACACGTACTCCACATATCCCAAATGCTaGTTGCTTCAAACAGGCACC +
Preference number: 2 (lower is better)
Translates to: AGSRAEGEAERVPPHTYSTYPKC*LLQTGT
Trigger: GGTGCCTGTTTGAAGCAAGCAGCATTTGGGATATGT...GGAGTACGTGTGAGGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR CCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCTGCACAGCCTGCCCATaGTGGAGGGGAGCACCTGAG +
Preference number: 2 (lower is better)
Translates to: LFMSAQAAEILCCHGHDICTACP*WRGAPE
Trigger: CTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCA...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475350.5
3UTR-3UTR TCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGATGGCTTCCTGTCTCCTaGCAAATAGGCATAGTACTT +
Preference number: 2 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRWLPVS*QIGIVL
Trigger: AAGTACTATGCCTATTTGTCAGGAGACAGGAAGCCA...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR TCA 90 bp GACACTCCAACAGCCACAGCACTGATCCTGGGCCTGCCATCCCTGGTTTCAGCCCCTAACACCTGTGACTaGCCTCTGATGGCCATTATT +
Preference number: 2 (lower is better)
Translates to: DTPTATALILGLPSLVSAPNTCD*PLMAII
Trigger: AATAATGGCCATCAGAGGTCAGTCACAGGTGTTAGG...GGCTGAAACCAGGGATGGCAGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR GCA 90 bp TACACACTCTCTCCTGGTTCTCGTCCAAGCACTGAAGTCAGTGCTATCATCCCCTGCCTGCAGAGGAGCTaGTCCAAGCAGACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: YTLSPGSRPSTEVSAIIPCLQRS*SKQTLR
Trigger: CCTCAGGGTCTGCTTGGAGCAGCTCCTCTGCAGGCA...GGGGATGATAGCACTGACTTCAGTGCTTGGACGAGAACCAGGAGAGAGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CCA 90 bp CACCTCCCCAGAGTATCAGGGAGGAACAGAGTGACAAGGTTGTCACAGGAGTCTGCCAGCTCCAAGAAGTaGCTGCACACAGGAGAGCCA +
Preference number: 2 (lower is better)
Translates to: HLPRVSGRNRVTRLSQESASSKK*LHTGEP
Trigger: TGGCTCTCCTGTGTGCAGCCACTTCTTGGAGCTGGC...AGACTCCTGTGACAACCTTGTCACTCTGTTCCTCCCTGATACTCTGGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGACCTTTTATGGGAGGCTaGCTGTGCTTTTTCTACACA +
Preference number: 2 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRPFMGG*LCFFYT
Trigger: TGTGTAGAAAAAGCACAGCCAGCCTCCCATAAAAGG...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CCA 90 bp GCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACCCTGGGTCTCTGCTTTaGGAGGCTCTGACCCTTCTT +
Preference number: 2 (lower is better)
Translates to: ALFMSAQAAEILCCHGHDPGSLL*EALTLL
Trigger: AAGAAGGGTCAGAGCCTCCCAAAGCAGAGACCCAGG...GTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
3UTR-3UTR TCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCGCTCCAAGCAGACCCTaGGGAAGGGCACATATCCCA +
Preference number: 2 (lower is better)
Translates to: LFMSAQAAEILCCHGHDIAPSRP*GRAHIP
Trigger: TGGGATATGTGCCCTTCCTCAGGGTCTGCTTGGAGC...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475350.5
3UTR-3UTR GCA 90 bp GGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTGCCCATCCCAAATGCTGCTTaGTTCAAACAGGCACCCTCG +
Preference number: 2 (lower is better)
Translates to: GEESTPNGSKPAELSELPIPNAA*FKQAPS
Trigger: CGAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGAT...GGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CCA 90 bp AGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACCTGGGTCTCTGCTTTaGGAGGCTCTGACCCTTCTT +
Preference number: 2 (lower is better)
Translates to: SPFHECTGSGNSLLSWARPGSLL*EALTLL
Trigger: AAGAAGGGTCAGAGCCTCCCAAAGCAGAGACCCAGG...TCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
3UTR-3UTR CCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTCCTGACATCGATGCCTaGTGTGAAGATACATCACCT +
Preference number: 2 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPPDIDA*CEDTSP
Trigger: AGGTGATGTATCTTCACACCAGGCATCGATGTCAGG...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTGAGTCTGTCCTTTTATaGGAGGCTGGCTGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPESVLL*EAGCAF
Trigger: AAAAGCACAGCCAGCCTCCCATAAAAGGACAGACTC...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR TCA 90 bp GCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACGTACACCTGAGGATTTaGGCGGGCCTTTTTAGCAAT +
Preference number: 2 (lower is better)
Translates to: ALFMSAQAAEILCCHGHDVHLRI*AGLFSN
Trigger: ATTGCTAAAAAGGCCCGCTCAAATCCTCAGGTGTAC...GTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474804.5
3UTR-3UTR GCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCGTTGTCGATAGCTGCTaGAGCATCCTCTGCCAACTC +
Preference number: 2 (lower is better)
Translates to: LFMSAQAAEILCCHGHDIVVDSC*SILCQL
Trigger: GAGTTGGCAGAGGATGCTGCAGCAGCTATCGACAAC...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
3UTR-3UTR GCA 90 bp AGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATGTTGTCGATAGCTaGTGCAGCATCCTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: SPFHECTGSGNSLLSWARHVVDS*CSILCQ
Trigger: TTGGCAGAGGATGCTGCAGCAGCTATCGACAACATG...TCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
3UTR-3UTR TCA 90 bp AGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGATGCTTTGGGAGGCTCTaGCCCTTCTTCCTCTTTATT +
Preference number: 2 (lower is better)
Translates to: SPFHECTGSGNSLLSWARCFGRL*PFFLFI
Trigger: AATAAAGAGGAAGAAGGGTCAGAGCCTCCCAAAGCA...TCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
3UTR-3UTR GCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAGTTCCTTCCTGGATATaGAGGGTCAAGAGCGGAGGG +
Preference number: 2 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPVPSWI*RVKSGG
Trigger: CCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR GCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAAAGCCAGTGGCTTTTTaGACAGCCTGCCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPKPVAF*TACPWW
Trigger: CCACCATGGGCAGGCTGTGCAAAAAGCCACTGGCTT...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR CCA 90 bp TACACACTCTCTCCTGGTTCTCGTCCAAGCACTGAAGTCAGTGCTATCATCCCCTTCTTTATAACCGCCTaGCTGACCAGCATCTGGAGG +
Preference number: 2 (lower is better)
Translates to: YTLSPGSRPSTEVSAIIPFFITA*LTSIWR
Trigger: CCTCCAGATGCTGGTCAGCCAGGCGGTTATAAAGAA...GGGGATGATAGCACTGACTTCAGTGCTTGGACGAGAACCAGGAGAGAGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAGCTCACCTGCTGTCATaGGCACGACATCAGAACGCA +
Preference number: 2 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPAHLLS*ARHQNA
Trigger: TGCGTTCTGATGTCGTGCCCATGACAGCAGGTGAGC...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR-3UTR TCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCTGCTTTGGGAGGCTCTaGCCCTTCTTCCTCTTTATT +
Preference number: 2 (lower is better)
Translates to: LFMSAQAAEILCCHGHDICFGRL*PFFLFI
Trigger: AATAAAGAGGAAGAAGGGTCAGAGCCTCCCAAAGCA...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
3UTR-3UTR TCA 90 bp CTTAAAGCCAAAGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCCCAGCAGCAAATGCTaGGAAAAGCCAGTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: LKAKALFMSAQAAEILCCPSSKC*EKPVAF
Trigger: AAAAGCCACTGGCTTTTCTCAGCATTTGCTGCTGGG...ACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGGCTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475350.5
3UTR-3UTR GCA 90 bp CTCTTTATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGCCTGCAGAGGAGCTaGTCCAAGCAGACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: LFILFKRLPRKLLQPVIICLQRS*SKQTLR
Trigger: CCTCAGGGTCTGCTTGGAGCAGCTCCTCTGCAGGCA...GATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR GCA 90 bp AGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGATGCTGCAGCATCCTCTaGCAACTCAAATTCAACAAA +
Preference number: 2 (lower is better)
Translates to: SPFHECTGSGNSLLSWARCCSIL*QLKFNK
Trigger: TTTGTTGAATTTGAGTTGGCAGAGGATGCTGCAGCA...TCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
3UTR-3UTR TCA 90 bp TACACACTCTCTCCTGGTTCTCGTCCAAGCACTGAAGTCAGTGCTATCATCCCCAAACTGCCTCAGAGCTaGACTGCAACATCAGTTTTT +
Preference number: 2 (lower is better)
Translates to: YTLSPGSRPSTEVSAIIPKLPQS*TATSVF
Trigger: AAAAACTGATGTTGCAGTTCAGCTCTGAGGCAGTTT...GGGGATGATAGCACTGACTTCAGTGCTTGGACGAGAACCAGGAGAGAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR GCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAGGCACATATCCCAAATaGTGCTTGCTTCAAACAGGC +
Preference number: 2 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPGTYPK*CLLQTG
Trigger: GCCTGTTTGAAGCAAGCAGCATTTGGGATATGTGCC...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR GCA 90 bp CTTAAAGCCAAAGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTGGCACATATCCCAAATaGTGCTTGCTTCAAACAGGC +
Preference number: 2 (lower is better)
Translates to: LKAKALFMSAQAAEILCCGTYPK*CLLQTG
Trigger: GCCTGTTTGAAGCAAGCAGCATTTGGGATATGTGCC...ACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGGCTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475350.5
3UTR-3UTR GCA 90 bp CTCTTTATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCGCTTTTTGCACAGCCTaGCCATGGTGGAGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: LFILFKRLPRKLLQPVIIAFCTA*PWWRGA
Trigger: TGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGC...GATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR GCA 90 bp TTCATAGACACAAAGATTAGAGGTTATCAGAAGCTAAGGGGAGGAGAAAATGGGGCTTTTTGCACAGCCTaGCCATGGTGGAGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: FIDTKIRGYQKLRGGENGAFCTA*PWWRGA
Trigger: TGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGC...CCCATTTTCTCCTCCCCTTAGCTTCTGATAACCTCTAATCTTTGTGTCTATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR-3UTR CCA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGCTGGCAGTTCCTTCCTaGATATGCAGGGTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQLAVPS*ICRVKS
Trigger: GCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR-3UTR TCA 90 bp CTTAAAGCCAAAGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTTTGGTTTGGCCAAATTaGCACGAATTGTACGTCCAA +
Preference number: 2 (lower is better)
Translates to: LKAKALFMSAQAAEILCCLVWPN*HELYVQ
Trigger: TTGGACGTACAATTCGTGTCAATTTGGCCAAACCAA...ACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGGCTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
3UTR-3UTR GCA 90 bp AAGCCTCAGTTTACCTGTGCAGGGTTCCAGTGTGCATTCAATAACATCTGTGAAAGCTTCATAGATGCCTaGCTAACACCTGTGACTGAC +
Preference number: 2 (lower is better)
Translates to: KPQFTCAGFQCAFNNICESFIDA*LTPVTD
Trigger: GTCAGTCACAGGTGTTAGGCAGGCATCTATGAAGCT...TTCACAGATGTTATTGAATGCACACTGGAACCCTGCACAGGTAAACTGAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR GCA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGCATGTTGTCGATAGCTaGTGCAGCATCCTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQHVVDS*CSILCQ
Trigger: TTGGCAGAGGATGCTGCAGCAGCTATCGACAACATG...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR-3UTR GCA 90 bp TTCATAGACACAAAGATTAGAGGTTATCAGAAGCTAAGGGGAGGAGAAAATGGGATGCAGACACCTGGATaGAAAACCCCCAGCAGGATG +
Preference number: 2 (lower is better)
Translates to: FIDTKIRGYQKLRGGENGMQTPG*KTPSRM
Trigger: CATCCTGCTGGGGGTTTTGCATCCAGGTGTCTGCAT...CCCATTTTCTCCTCCCCTTAGCTTCTGATAACCTCTAATCTTTGTGTCTATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR-3UTR CCA 90 bp TACACACTCTCTCCTGGTTCTCGTCCAAGCACTGAAGTCAGTGCTATCATCCCCGTAAATAAATGGACGTaGCTGTGTTCCAATAAAACC +
Preference number: 2 (lower is better)
Translates to: YTLSPGSRPSTEVSAIIPVNKWT*LCSNKT
Trigger: GGTTTTATTGGAACACAGCCACGTCCATTTATTTAC...GGGGATGATAGCACTGACTTCAGTGCTTGGACGAGAACCAGGAGAGAGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CAA 90 bp AAAAGCTCAGAGGAAAGGGTGCAGGTAATCCTGGAGACAGTAAGTTaGGCTGAAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCT +
Preference number: 2 (lower is better)
Translates to: KSSEERVQVILETVS*AESPFKKVVNLWDP
Trigger: AGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTTCAGCCAAACTTACTGTCTCCAGGATTACCTGCACCCTTTCCTCTGAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR-3UTR TCA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGTTGGTTTGGCCAAATTaGCACGAATTGTACGTCCAA +
Preference number: 2 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQLVWPN*HELYVQ
Trigger: TTGGACGTACAATTCGTGTCAATTTGGCCAAACCAA...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR-3UTR GCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCTGCTGCAGCATCCTCTaGCAACTCAAATTCAACAAA +
Preference number: 2 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTCCSIL*QLKFNK
Trigger: TTTGTTGAATTTGAGTTGGCAGAGGATGCTGCAGCA...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474804.5
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR TCA 90 bp CTCTTTATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTTGGTTTGGCCAAATTaGCACGAATTGTACGTCCAA +
Preference number: 2 (lower is better)
Translates to: LFILFKRLPRKLLQPVIILVWPN*HELYVQ
Trigger: TTGGACGTACAATTCGTGTCAATTTGGCCAAACCAA...GATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474804.5
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR GCA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAAACATATCCCAAATGCTaGTTGCTTCAAACAGGCACC +
Preference number: 2 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQTYPKC*LLQTGT
Trigger: GGTGCCTGTTTGAAGCAAGCAGCATTTGGGATATGT...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 72 bp GTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTaGGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCAT +
Preference number: 3 (lower is better)
Translates to: VFPRQPGAAAAW*VAEAGGQAVGH
Trigger: ATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 72 bp AGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATaGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: RVFPRQPGAAAA*CVAEAGGQAVG
Trigger: CCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 72 bp AGAGGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTaGTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: RGQSFPEAARCS*CMVRSRSRWPG
Trigger: GCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 72 bp GGGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTaGGCTTTCAGAACTGCCCACTGGCCTCCACCTCCC +
Preference number: 3 (lower is better)
Translates to: GRGVHTQWLQTC*AFRTAHWPPPP
Trigger: GGGAGGTGGAGGCCAGTGGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 72 bp CAGTCCTGGTGCTGGTCCAGCAATGGGAATGTGGAATaGGGAGGCCAGTTGGGACAGGAGCCACACAGTCCC +
Preference number: 3 (lower is better)
Translates to: QSWCWSSNGNVE*GGQLGQEPHSP
Trigger: GGGACTGTGTGGCTCCTGTCCCAACTGGCCTCCCCATTCCACATTCCCATTGCTGGACCAGCACCAGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 72 bp GCAACAGATGCTGGGAGCACCTGGAGGCGGCTGTCATaGTGTTGGAGAGGACACTCCAACAGCCACAGCACT +
Preference number: 3 (lower is better)
Translates to: ATDAGSTWRRLS*CWRGHSNSHST
Trigger: AGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAGCCGCCTCCAGGTGCTCCCAGCATCTGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 72 bp GATGCTGGGAGCACCTGGAGGCGGCTGTCATGCTGTTaGAGAGGACACTCCAACAGCCACAGCACTGATCCT +
Preference number: 3 (lower is better)
Translates to: DAGSTWRRLSCC*RGHSNSHSTDP
Trigger: AGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAGCCGCCTCCAGGTGCTCCCAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CAA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTGAATGGGGAGGCCAGTaGGGACAGGAGCCACACAGT +
Preference number: 3 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPEWGGQ*GQEPHS
Trigger: ACTGTGTGGCTCCTGTCCCAACTGGCCTCCCCATTC...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CAA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTTATCCCAAATGCTGCTaGCTTCAAACAGGCACCCTC +
Preference number: 3 (lower is better)
Translates to: PVAFCTACPWWRGAPELAYPKCC*LQTGTL
Trigger: GAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGATA...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
3UTR-3UTR CAA 90 bp GGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTGCCCAGGGGGTGGGACCATTaGTTCTCTTCAGTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: GEESTPNGSKPAELSELPRGWDH*FSSVAG
Trigger: GCCAGCCACTGAAGAGAACAAATGGTCCCACCCCCT...GGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 72 bp TGCCACCATCCCTCAGCAAGAGCTATCCTAGGGTCATaGGGACCACCTAGCCTCTCCTGCCTCCTGGCTCAT +
Preference number: 3 (lower is better)
Translates to: CHHPSARAILGS*GPPSLSCLLAH
Trigger: ATGAGCCAGGAGGCAGGAGAGGCTAGGTGGTCCTCATGACCCTAGGATAGCTCTTGCTGAGGGATGGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 72 bp TCCAGTCGGCACATGGGAGCCAGAGGTAGGGCAGAATaGCACCATCCCTCAGCAAGAGCTATCCTAGGGTCA +
Preference number: 3 (lower is better)
Translates to: SSRHMGARGRAE*HHPSARAILGS
Trigger: TGACCCTAGGATAGCTCTTGCTGAGGGATGGTGGCATTCTGCCCTACCTCTGGCTCCCATGTGCCGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 72 bp GAGACTAACAGTGGTTTAGGGATACCAACCCCTGCCTaGCCATTTGCCCACTTCCACCCCGGAACCTGGGCA +
Preference number: 3 (lower is better)
Translates to: ETNSGLGIPTPA*PFAHFHPGTWA
Trigger: TGCCCAGGTTCCGGGGTGGAAGTGGGCAAATGGGCAGGCAGGGGTTGGTATCCCTAAACCACTGTTAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470213.5
3UTR CCA 72 bp TGTAGCAGCTGGAGCTCACAAAGTCCAGTCGGCACATaGGAGCCAGAGGTAGGGCAGAATGCCACCATCCCT +
Preference number: 3 (lower is better)
Translates to: CSSWSSQSPVGT*EPEVGQNATIP
Trigger: AGGGATGGTGGCATTCTGCCCTACCTCTGGCTCCCATGTGCCGACTGGACTTTGTGAGCTCCAGCTGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 72 bp ATAATTCCTTCTTCAGAGGTTGCCGTGAGGCTGCCATaGCTGCAACAGATGCTGGGAGCACCTGGAGGCGGC +
Preference number: 3 (lower is better)
Translates to: IIPSSEVAVRLP*LQQMLGAPGGG
Trigger: GCCGCCTCCAGGTGCTCCCAGCATCTGTTGCAGTCATGGCAGCCTCACGGCAACCTCTGAAGAAGGAATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 72 bp AAGGAGGAGGCCCATTCCTGGCCACATACCTCAATTTaGCGCAAGACATCTAGGCCTTCGGTGACCTCTCCA +
Preference number: 3 (lower is better)
Translates to: KEEAHSWPHTSI*RKTSRPSVTSP
Trigger: TGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGCCTCCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
3UTR CCA 72 bp GCTACATGGAGCCTGAACTCAGTCAACTGTAGCAGCTaGAGCTCACAAAGTCCAGTCGGCACATGGGAGCCA +
Preference number: 3 (lower is better)
Translates to: ATWSLNSVNCSS*SSQSPVGTWEP
Trigger: TGGCTCCCATGTGCCGACTGGACTTTGTGAGCTCCAGCTGCTACAGTTGACTGAGTTCAGGCTCCATGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CAA 90 bp GGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTGCCCTATCCCAAATGCTGCTaGCTTCAAACAGGCACCCTC +
Preference number: 3 (lower is better)
Translates to: GEESTPNGSKPAELSELPYPKCC*LQTGTL
Trigger: GAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGATA...GGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CAA 90 bp CACCTCCCCAGAGTATCAGGGAGGAACAGAGTGACAAGGTTGTCACAGGAGTCTCAGCCTGCTGGTCTGTaGTGCAGATTGCAGACTTGC +
Preference number: 3 (lower is better)
Translates to: HLPRVSGRNRVTRLSQESQPAGL*CRLQTC
Trigger: GCAAGTCTGCAATCTGCACAACAGACCAGCAGGCTG...AGACTCCTGTGACAACCTTGTCACTCTGTTCCTCCCTGATACTCTGGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 72 bp GCCTCCACCTCCCCAGAGTATCAGGGAGGAACAGAGTaGCAAGGTTGTCACAGGAGTCTGTCCTTTTATGGG +
Preference number: 3 (lower is better)
Translates to: ASTSPEYQGGTE*QGCHRSLSFYG
Trigger: CCCATAAAAGGACAGACTCCTGTGACAACCTTGTCACTCTGTTCCTCCCTGATACTCTGGGGAGGTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 72 bp CAAAAGCTCAGCTCAGTGGATTCTGAATGGTCTGAGTaGCCCAACCCACAGGAGGTGTCCAACAGCTACAGG +
Preference number: 3 (lower is better)
Translates to: QKLSSVDSEWSE*PNPQEVSNSYR
Trigger: CCTGTAGCTGTTGGACACCTCCTGTGGGTTGGGTCACTCAGACCATTCAGAATCCACTGAGCTGAGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 72 bp GGGCTTCTAATCCCAGCTCTGCCAAACCACCCTGTGTaGCCTTTGGCAGTCACGCCAATAAAGCCTCAGTTT +
Preference number: 3 (lower is better)
Translates to: GLLIPALPNHPV*PLAVTPIKPQF
Trigger: AAACTGAGGCTTTATTGGCGTGACTGCCAAAGGTCACACAGGGTGGTTTGGCAGAGCTGGGATTAGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 72 bp CCCCAGCTTCATAGATGCCTGCCTAACACCTGTGACTaGCCTCTGATGGCCATTATTTGCACTCAGAGAAGG +
Preference number: 3 (lower is better)
Translates to: PQLHRCLPNTCD*PLMAIICTQRR
Trigger: CCTTCTCTGAGTGCAAATAATGGCCATCAGAGGTCAGTCACAGGTGTTAGGCAGGCATCTATGAAGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 72 bp CATTCAATAACATCTGTGAACACCCAGGAGGAACACTaGGAGAGGAGTCCACACCCAATGGCTCCAAACCTG +
Preference number: 3 (lower is better)
Translates to: HSITSVNTQEEH*ERSPHPMAPNL
Trigger: CAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCCCAGTGTTCCTCCTGGGTGTTCACAGATGTTATTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 72 bp TCCTGCCTCCTGGCTCATCCAGATCTCAATCCAAGATaGAAAAGCTCAGCTCAGTGGATTCTGAATGGTCTG +
Preference number: 3 (lower is better)
Translates to: SCLLAHPDLNPR*KSSAQWILNGL
Trigger: CAGACCATTCAGAATCCACTGAGCTGAGCTTTTGCATCTTGGATTGAGATCTGGATGAGCCAGGAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 72 bp CCAGATCTCAATCCAAGATGCAAAAGCTCAGCTCAGTaGATTCTGAATGGTCTGAGTGACCCAACCCACAGG +
Preference number: 3 (lower is better)
Translates to: PDLNPRCKSSAQ*ILNGLSDPTHR
Trigger: CCTGTGGGTTGGGTCACTCAGACCATTCAGAATCCACTGAGCTGAGCTTTTGCATCTTGGATTGAGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR GCA 72 bp GCAGAAGACCGGAGCTTTCCAGTCTTTAATTTCCGTTaGCCTGACATCGATGCCTGGTGTGAAGATACATCA +
Preference number: 3 (lower is better)
Translates to: AEDRSFPVFNFR*PDIDAWCEDTS
Trigger: TGATGTATCTTCACACCAGGCATCGATGTCAGGGCAACGGAAATTAAAGACTGGAAAGCTCCGGTCTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CCA 72 bp CAGCAGGGGGTGGGACCATTTGTTCTCTTCAGTGGCTaGCAATCCTGTTTTGTAAAGGCTCAGATAGTAAGT +
Preference number: 3 (lower is better)
Translates to: QQGVGPFVLFSG*QSCFVKAQIVS
Trigger: ACTTACTATCTGAGCCTTTACAAAACAGGATTGCCAGCCACTGAAGAGAACAAATGGTCCCACCCCCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR-3UTR CAA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCATCAGATTCATTCATGTaGTCGATAGCTGCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPSDSFM*SIAAAA
Trigger: TGCTGCAGCAGCTATCGACAACATGAATGAATCTGA...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475350.5
3UTR TCA 72 bp AACTTAGGTCAGAAGCAATATCAAGGACACAAGAAGTaGAGCAGTAAGAACCTGGGAAAGGCTCACTGCTCA +
Preference number: 3 (lower is better)
Translates to: NLGQKQYQGHKK*SSKNLGKAHCS
Trigger: TGAGCAGTGAGCCTTTCCCAGGTTCTTACTGCTTCACTTCTTGTGTCCTTGATATTGCTTCTGACCTAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR TCA 72 bp GTCTCTGGACTAGGACATCCTACGCATAGTGAGGGCTaGGGTACCATAATGACAAATGGAGATTATGTGAAA +
Preference number: 3 (lower is better)
Translates to: VSGLGHPTHSEG*GTIMTNGDYVK
Trigger: TTTCACATAATCTCCATTTGTCATTATGGTACCTCAGCCCTCACTATGCGTAGGATGTCCTAGTCCAGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR GCA 72 bp TGTTGTGCAGATTGCAGACTTGCCAGCTCCTACCACTaGTTGAGCCAGTTCCTTAAAATAAATCTCTTTCTA +
Preference number: 3 (lower is better)
Translates to: CCADCRLASSYH*LSQFLKINLFL
Trigger: TAGAAAGAGATTTATTTTAAGGAACTGGCTCAAGCAGTGGTAGGAGCTGGCAAGTCTGCAATCTGCACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR TCA 72 bp CCCATGCAACCTTGTAACTTTGGAAGTCCAGAACACTaGTATATGAATAAGGAGCCTCTGTACCACCAAAAA +
Preference number: 3 (lower is better)
Translates to: PMQPCNFGSPEH*YMNKEPLYHQK
Trigger: TTTTTGGTGGTACAGAGGCTCCTTATTCATATATCAGTGTTCTGGACTTCCAAAGTTACAAGGTTGCATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000495526.5
3UTR GCA 72 bp CATGGTACAAGGATGAACCTTGAAAGCATTATGCTATaGAAAATCAACAAGGCGTGGAAAAGGACAGCTATT +
Preference number: 3 (lower is better)
Translates to: HGTRMNLESIML*KINKAWKRTAI
Trigger: AATAGCTGTCCTTTTCCACGCCTTGTTGATTTTGCATAGCATAATGCTTTCAAGGTTCATCCTTGTACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR TCA 72 bp AACCTTGTAACTTTGGAAGTCCAGAACACTGATATATaGATAAGGAGCCTCTGTACCACCAAAAAGCAACTT +
Preference number: 3 (lower is better)
Translates to: NLVTLEVQNTDI*IRSLCTTKKQL
Trigger: AAGTTGCTTTTTGGTGGTACAGAGGCTCCTTATTCATATATCAGTGTTCTGGACTTCCAAAGTTACAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000495526.5
CDS-3UTR TCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCAGCGTCCCGCCGTTCTaGCCACAGCGTCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRSVPPF*PQRPAH
Trigger: GTGAGCAGGACGCTGTGGTCAGAACGGCGGGACGCT...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTAGACGCGCTTGGTGGTaGCCATCTTGCTCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELARRAWW*PSCSRA
Trigger: AGCGCGCGAGCAAGATGGCCACCACCAAGCGCGTCT...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTACAGCCTGCCCATGGTaGAGGGGAGCACCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELATACPW*RGAPEL
Trigger: CAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGT...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp AGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCATGCCACCCCTCCCTTCTGGCCTaGAAGAGCAGGGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SCCMVRSRSRWPGCGACHPSLLA*KSRVLS
Trigger: AGACAAGACCCTGCTCTTCCAGGCCAGAAGGGAGGG...GTGGCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCAGGTGGCCAGGCTGTaGGGCATGCCACTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPQVARL*GMPLPS
Trigger: GCTGGGCAGTGGCATGCCCCACAGCCTGGCCACCTG...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCGTAGCCGAAGCAGGTaGCCAGGCTGTGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRRSRSR*PGCGAC
Trigger: GCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACG...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGATGGCATGACCATGGCTaGCTGCAGCCTCAACCTCCC +
Preference number: 4 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRWHDHG*LQPQPP
Trigger: GGGAGGTTGAGGCTGCAGTCAGCCATGGTCATGCCA...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCGCTTCCCGTCCTTGCTaGCCTGGGCCTCAATTTGCC +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAAASRPC*PGPQFA
Trigger: GGCAAATTGAGGCCCAGGGCAGCAAGGACGGGAAGC...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTTGCCTGCAGAGGAGCTaGTCCAAGCAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELACLQRS*SKQTLR
Trigger: CCTCAGGGTCTGCTTGGAGCAGCTCCTCTGCAGGCA...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTCTGACCACAGCGTCCTaGTCACCTGCTGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELALTTAS*SPAVMG
Trigger: GCCCATGACAGCAGGTGAGCAGGACGCTGTGGTCAG...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCCCGTCCTTGCTGCCCTaGGCCTCAATTTGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAAPSLLP*ASICRK
Trigger: CTTGCGGCAAATTGAGGCCCAGGGCAGCAAGGACGG...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCGATGCTGGGAGCACCTaGAGGCGGCTGTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAADAGST*RRLSCC
Trigger: ACAGCATGACAGCCGCCTCCAGGTGCTCCCAGCATC...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCTGCCTGCAGAGGAGCTaGTCCAAGCAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRCLQRS*SKQTLR
Trigger: CCTCAGGGTCTGCTTGGAGCAGCTCCTCTGCAGGCA...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp AGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCATGCCACCCTGCTGGTCTGTTGTaGAGATTGCAGACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SCCMVRSRSRWPGCGACHPAGLL*RLQTCQ
Trigger: CTGGCAAGTCTGCAATCTGCACAACAGACCAGCAGG...GTGGCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCTGGGAAAGGCTCACTaGTCAGCCACCAGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPLGKAH*SATSVP
Trigger: CGGGACGCTGGTGGCTGAGCAGTGAGCCTTTCCCAG...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTCTGGGAGGCGGAGGTTaGAGTGAGCCAATATCACGC +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELALGGGG*SEPISR
Trigger: GCGTGATATTGGCTCACTGCAACCTCCGCCTCCCAG...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCTGCACAGCCTGCCCATaGTGGAGGGGAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: VPSWICRVKSGGGSRESACTACP*WRGAPE
Trigger: CTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCA...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCGGTGCAGCTGCTGCATaGTGCGTAGCCGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRGAAAA*CVAEAG
Trigger: ACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACC...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCAATGGGAATGTGGAATaGGGAGGCCAGTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: FPRQPGAAAAWCVAEAGGNGNVE*GGQLGQ
Trigger: CTGTCCCAACTGGCCTCCCCATTCCACATTCCCATT...GCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGGCTCCAAGCAGACCCTaGGGAAGGGCACATATCCCA +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEAPSRP*GRAHIP
Trigger: TGGGATATGTGCCCTTCCTCAGGGTCTGCTTGGAGC...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCCCCACCTCAGCCTTCTaGGTAGCTGGGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAAPTSAF*VAGTIG
Trigger: ACCTATAGTCCCAGCTACTCAGAAGGCTGAGGTGGG...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp TTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCCTGTGACTGACCTCTaGTGGCCATTATTTGCACTC +
Preference number: 4 (lower is better)
Translates to: FPRQPGAAAAWCVAEAGGPVTDL*WPLFAL
Trigger: GAGTGCAAATAATGGCCATCAGAGGTCAGTCACAGG...GCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTCCCTGGGCCTCAATTTaGCGCAAGACATCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELAPWASI*RKTSRP
Trigger: AGGCCTAGATGTCTTGCGGCAAATTGAGGCCCAGGG...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGCTTCCCGTCCTTGCTaGCCTGGGCCTCAATTTGCC +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRASRPC*PGPQFA
Trigger: GGCAAATTGAGGCCCAGGGCAGCAAGGACGGGAAGC...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp AGGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGGGAAGCAGAGAGAGTaGCGCCTCACACGTACTCCC +
Preference number: 4 (lower is better)
Translates to: RLAVPSWICRVKSGGGSRGKQRE*RLTRTP
Trigger: GGGAGTACGTGTGAGGCGGCACTCTCTCTGCTTCCC...TCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGGCTTTTTGCACAGCCTaGCCATGGTGGAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEAFCTA*PWWRGA
Trigger: TGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGC...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCGCCTCAGTTTACCTGTaGAGGGTTCCAGTGTGCATT +
Preference number: 4 (lower is better)
Translates to: FPRQPGAAAAWCVAEAGGASVYL*RVPVCI
Trigger: AATGCACACTGGAACCCTGCACAGGTAAACTGAGGC...GCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp GGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGACAAGACGCGCTTGGTaGTGGCCATCTTGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GSSFLDMQGQERRGKQRETRRAW*WPSCSR
Trigger: GCGCGAGCAAGATGGCCACCACCAAGCGCGTCTTGT...CTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324379.10
ENST00000495526.5
CDS-3UTR CCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCGTCCTTGCTGCCCTaGGCCTCAATTTGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPPSLLP*ASICRK
Trigger: CTTGCGGCAAATTGAGGCCCAGGGCAGCAAGGACGG...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCCCGTCCTTGCTGCCCTaGGCCTCAATTTGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: VPSWICRVKSGGGSRESAPSLLP*ASICRK
Trigger: CTTGCGGCAAATTGAGGCCCAGGGCAGCAAGGACGG...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCACAGCCTGCCCATGGTaGAGGGGAGCACCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECTACPW*RGAPEL
Trigger: CAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGT...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGACAGCCTGCCCATGGTaGAGGGGAGCACCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVTACPW*RGAPEL
Trigger: CAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGT...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCTGCACAGCCTGCCCATaGTGGAGGGGAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECCTACP*WRGAPE
Trigger: CTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCA...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTCGGCTGTCATGCTGTTaGAGAGGACACTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELARLSCC*RGHSNS
Trigger: GCTGTTGGAGTGTCCTCTCCAACAGCATGACAGCCG...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
3UTR CAA 72 bp GTCACTCCCCAGGGCTGTGGACCCTGCCGCCACAGATaGAGGCTAAAGCCTAGTAAACCTCCCAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: VTPQGCGPCRHR*RLKPSKPPRTP
Trigger: TGGAGTCCTGGGAGGTTTACTAGGCTTTAGCCTCAATCTGTGGCGGCAGGGTCCACAGCCCTGGGGAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGACCAAAGCCCTTTTCATaGGTGCACAGGCAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRPKPFS*VHRQRK
Trigger: TTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGG...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCTGCCATTGTGGTTTGTaGAATCACCGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAACHCGL*NHRPGT
Trigger: TGTGCCAGGGCGGTGATTTCACAAACCACAATGGCA...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp GGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGGAGTACAGTGGCATaGCCATGGCTGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSSFLDMQGQERRGKQREWSTVA*PWLTAA
Trigger: GGCTGCAGTCAGCCATGGTCATGCCACTGTACTCCA...CTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGCTATCCTAGGGTCATaGGGACCACCTAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRAILGS*GPPSLS
Trigger: GGAGAGGCTAGGTGGTCCTCATGACCCTAGGATAGC...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCTTCAGAGGTTGCCGTaGGGCTGCCATGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPLQRLP*GCHDCN
Trigger: GTTGCAGTCATGGCAGCCTCACGGCAACCTCTGAAG...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTGCCCGCTTCCCGTCCTTGCTaGCCTGGGCCTCAATTTGCC +
Preference number: 4 (lower is better)
Translates to: GEESTPNGSKPAELSELPASRPC*PGPQFA
Trigger: GGCAAATTGAGGCCCAGGGCAGCAAGGACGGGAAGC...GGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCGCTTCCCGTCCTTGCTaGCCTGGGCCTCAATTTGCC +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECASRPC*PGPQFA
Trigger: GGCAAATTGAGGCCCAGGGCAGCAAGGACGGGAAGC...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGGGAAGCAGAGAGAGTaGCGCCTCACACGTACTCCC +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESGKQRE*RLTRTP
Trigger: GGGAGTACGTGTGAGGCGGCACTCTCTCTGCTTCCC...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCGTTCCTTCCTGGATATaGAGGGTCAAGAGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRVPSWI*RVKSGG
Trigger: CCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGGTTCCTTCCTGGATATaGAGGGTCAAGAGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEVPSWI*RVKSGG
Trigger: CCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTGCCCTGCCTGCAGAGGAGCTaGTCCAAGCAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GEESTPNGSKPAELSELPCLQRS*SKQTLR
Trigger: CCTCAGGGTCTGCTTGGAGCAGCTCCTCTGCAGGCA...GGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AGGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGCTTTTTGCACAGCCTaGCCATGGTGGAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RLAVPSWICRVKSGGGSRAFCTA*PWWRGA
Trigger: TGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGC...TCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGGCTTTTTGCACAGCCTaGCCATGGTGGAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPAFCTA*PWWRGA
Trigger: TGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGC...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCAAGCCAGTGGCTTTTTaGACAGCCTGCCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRKPVAF*TACPWW
Trigger: CCACCATGGGCAGGCTGTGCAAAAAGCCACTGGCTT...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGCCTGGGTCTCTGCTTTaGGAGGCTCTGACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEPGSLL*EALTLL
Trigger: AAGAAGGGTCAGAGCCTCCCAAAGCAGAGACCCAGG...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGGCCAGAGTTGGCCATaGATAGTAGACCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VPSWICRVKSGGGSRESAGQSWP*IVDLVP
Trigger: CGGGACCAGGTCTACTATCCATGGCCAACTCTGGCC...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGGCCAGCTCCAAGAAGTaGCTGCACACAGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPASSKK*LHTGEP
Trigger: TGGCTCTCCTGTGTGCAGCCACTTCTTGGAGCTGGC...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCCAGTCCTGGTGCTaGTCCAGCAATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: VPSWICRVKSGGGSRESAAQSWC*SSNGNV
Trigger: CACATTCCCATTGCTGGACCAGCACCAGGACTGGGC...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp AGGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGATTCAGGGCCAGCATGTaGGGACTCAGATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLAVPSWICRVKSGGGSRFRASM*GLRWGS
Trigger: TGAGCCCCATCTGAGTCCCCACATGCTGGCCCTGAA...TCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp GCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGGCTGGACACAGCCCCTaGCCATCTCTCTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: AHSWPHTSICRKTSRPSVAGHSP*PSLSGH
Trigger: GTGGCCTGAGAGAGATGGCCAGGGGCTGTGTCCAGC...CACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR TCA 90 bp GCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCTCACACGTACTCCTGCTTTGGGAGGCTCTaGCCCTTCTTCCTCTTTATT +
Preference number: 4 (lower is better)
Translates to: AGSRAEGEAERVPPHTYSCFGRL*PFFLFI
Trigger: AATAAAGAGGAAGAAGGGTCAGAGCCTCCCAAAGCA...GGAGTACGTGTGAGGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGCCAAAGCCCTTTTCATaGGTGCACAGGCAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEPKPFS*VHRQRK
Trigger: TTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGG...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCGCTCCAAGCAGACCCTaGGGAAGGGCACATATCCCA +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECAPSRP*GRAHIP
Trigger: TGGGATATGTGCCCTTCCTCAGGGTCTGCTTGGAGC...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGGCTCCAAGCAGACCCTaGGGAAGGGCACATATCCCA +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVAPSRP*GRAHIP
Trigger: TGGGATATGTGCCCTTCCTCAGGGTCTGCTTGGAGC...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTCCCAGCAGCAAATGCTaGGAAAAGCCAGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELAPSSKC*EKPVAF
Trigger: AAAAGCCACTGGCTTTTCTCAGCATTTGCTGCTGGG...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGATCTGAATGGTCTGAGTaGCCCAACCCACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRSEWSE*PNPQEV
Trigger: CACCTCCTGTGGGTTGGGTCACTCAGACCATTCAGA...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGATGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACCA +
Preference number: 4 (lower is better)
Translates to: GSSFLDMQGQERRGKQREMRSGV*DQPGQP
Trigger: TGGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAT...CTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp AGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCATGCCACACATATCCCAAATGCTaGTTGCTTCAAACAGGCACC +
Preference number: 4 (lower is better)
Translates to: SCCMVRSRSRWPGCGACHTYPKC*LLQTGT
Trigger: GGTGCCTGTTTGAAGCAAGCAGCATTTGGGATATGT...GTGGCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAAAGCCAGTGGCTTTTTaGACAGCCTGCCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRKPVAF*TACPWW
Trigger: CCACCATGGGCAGGCTGTGCAAAAAGCCACTGGCTT...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCGTCTGTTGTGCAGATTaGAGACTTGCCAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAAVCCAD*RLASSY
Trigger: GTAGGAGCTGGCAAGTCTGCAATCTGCACAACAGAC...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTCTGAGCTTTCAGAACTaGCCACTGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESLSFQN*PLASTS
Trigger: GGAGGTGGAGGCCAGTGGGCAGTTCTGAAAGCTCAG...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CACCTCCCCAGAGTATCAGGGAGGAACAGAGTGACAAGGTTGTCACAGGAGTCTGCCAGGTGCAGCTGCTaGATGGTGCGTAGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: HLPRVSGRNRVTRLSQESARCSC*MVRSRS
Trigger: GCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGC...AGACTCCTGTGACAACCTTGTCACTCTGTTCCTCCCTGATACTCTGGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGTGTGCCCAGTCCTGGTaGTGGTCCAGCAATGGGAAT +
Preference number: 4 (lower is better)
Translates to: LAVPSWICRVKSGGGSRECAQSW*WSSNGN
Trigger: ATTCCCATTGCTGGACCAGCACCAGGACTGGGCACA...CTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCAAAAGGAAGCCCTGTaGCCAGTCCTGGTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECQKEAL*PVLVLV
Trigger: GACCAGCACCAGGACTGGGCACAGGGCTTCCTTTTG...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCTGGAGGCGGCTGTCATaGTGTTGGAGAGGACACTCC +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECWRRLS*CWRGHS
Trigger: GGAGTGTCCTCTCCAACAGCATGACAGCCGCCTCCA...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCGTCGTCCACTTCCTCTaGCAGTCCACAAGACGCGCT +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECVVHFL*QSTRRA
Trigger: AGCGCGTCTTGTGGACTGGCAGAGGAAGTGGACGAC...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGGCCAGAGTTGGCCATaGATAGTAGACCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESGQSWP*IVDLVP
Trigger: CGGGACCAGGTCTACTATCCATGGCCAACTCTGGCC...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTTGTTTGGGCCAGAGTTaGCCATGGATAGTAGACCTG +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELACLGQS*PWIVDL
Trigger: CAGGTCTACTATCCATGGCCAACTCTGGCCCAAACA...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCGCTGAGAAAAGCCAGTaGCTTTTTGCACAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRAEKSQ*LFAQPA
Trigger: GGCAGGCTGTGCAAAAAGCCACTGGCTTTTCTCAGC...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GACACTCCAACAGCCACAGCACTGATCCTGGGCCTGCCATCCCTGGTTTCAGCCGAGCTCAGCAGGGGGTaGGACCATTTGTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: DTPTATALILGLPSLVSAELSRG*DHLFSS
Trigger: TGAAGAGAACAAATGGTCCCACCCCCTGCTGAGCTC...GGCTGAAACCAGGGATGGCAGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCCTTTTATGGGAGGCTaGCTGTGCTTTTTCTACACA +
Preference number: 4 (lower is better)
Translates to: FPRQPGAAAAWCVAEAGGPFMGG*LCFFYT
Trigger: TGTGTAGAAAAAGCACAGCCAGCCTCCCATAAAAGG...GCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp GGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTGCCCTTCAGAACTGCCCACTaGCCTCCACCTCCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GEESTPNGSKPAELSELPFRTAH*PPPPQS
Trigger: ACTCTGGGGAGGTGGAGGCCAGTGGGCAGTTCTGAA...GGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCTCCACAAGACGCGCTTaGTGGTGGCCATCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECSTRRA*WWPSCS
Trigger: CGAGCAAGATGGCCACCACCAAGCGCGTCTTGTGGA...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCAAGATGCAGACACCTaGATGCAAAACCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRQDADT*MQNPQQ
Trigger: CTGCTGGGGGTTTTGCATCCAGGTGTCTGCATCTTG...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAGGAATGAACGCAGCATaGAGAACTTTGTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRGMNAA*RTLSST
Trigger: AGTGGACGACAAAGTTCTTCATGCTGCGTTCATTCC...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAGTACACCTGAGGATTTaGGCGGGCCTTTTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRVHLRI*AGLFSN
Trigger: ATTGCTAAAAAGGCCCGCTCAAATCCTCAGGTGTAC...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGATGCCATTGTGGTTTGTaGAATCACCGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRCHCGL*NHRPGT
Trigger: TGTGCCAGGGCGGTGATTTCACAAACCACAATGGCA...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCATGTCAGGAAGAACTaGGAGCCATTGGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRHVRKN*EPLVFG
Trigger: CCCAAACACCAATGGCTCTCAGTTCTTCCTGACATG...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCGTCGTCCACTTCCTCTaGCAGTCCACCCACGTACAA +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECVVHFL*QSTHVQ
Trigger: TTGTACGTGGGTGGACTGGCAGAGGAAGTGGACGAC...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324379.10
ENST00000372835.9
CDS-3UTR GCA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGTTGTCGATAGCTGCTaGAGCATCCTCTGCCAACTC +
Preference number: 4 (lower is better)
Translates to: VPSWICRVKSGGGSRESAVVDSC*SILCQL
Trigger: GAGTTGGCAGAGGATGCTGCAGCAGCTATCGACAAC...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GACACTCCAACAGCCACAGCACTGATCCTGGGCCTGCCATCCCTGGTTTCAGCCCATGTTGTCGATAGCTaGTGCAGCATCCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: DTPTATALILGLPSLVSAHVVDS*CSILCQ
Trigger: TTGGCAGAGGATGCTGCAGCAGCTATCGACAACATG...GGCTGAAACCAGGGATGGCAGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCCCTGGGCCTCAATTTaGCGCAAGACATCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECPWASI*RKTSRP
Trigger: AGGCCTAGATGTCTTGCGGCAAATTGAGGCCCAGGG...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGACCCTGGGCCTCAATTTaGCGCAAGACATCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: WQFLPGYAGSRAEGEAERPWASI*RKTSRP
Trigger: AGGCCTAGATGTCTTGCGGCAAATTGAGGCCCAGGG...TCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TCGATGCCTGGTGTGAAGATACATCACCTGACATCTAAGGGGATCGGCCCAAGGGGGAAGCAGAGAGAGTaGCGCCTCACACGTACTCCC +
Preference number: 4 (lower is better)
Translates to: SMPGVKIHHLTSKGIGPRGKQRE*RLTRTP
Trigger: GGGAGTACGTGTGAGGCGGCACTCTCTCTGCTTCCC...CCTTGGGCCGATCCCCTTAGATGTCAGGTGATGTATCTTCACACCAGGCATCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGTTCCTTCCTGGATATaGAGGGTCAAGAGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESVPSWI*RVKSGG
Trigger: CCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCGGCACATATCCCAAATaGTGCTTGCTTCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAAGTYPK*CLLQTG
Trigger: GCCTGTTTGAAGCAAGCAGCATTTGGGATATGTGCC...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAGTCTTTAATTTCCGTTaGCCTGACATCGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRVFNFR*PDIDAW
Trigger: CCAGGCATCGATGTCAGGGCAACGGAAATTAAAGAC...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGATGACCATGGCTGACTaGAGCCTCAACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVMTMAD*SLNLPG
Trigger: ACCTGGGAGGTTGAGGCTGCAGTCAGCCATGGTCAT...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAAGCTTCATAGATGCCTaGCTAACACCTGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRSFIDA*LTPVTD
Trigger: GTCAGTCACAGGTGTTAGGCAGGCATCTATGAAGCT...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACGTCGTCCACTTCCTCTaGCAGTCCACAAGACGCGCT +
Preference number: 4 (lower is better)
Translates to: ALFMSAQAAEILCCHGHDVVHFL*QSTRRA
Trigger: AGCGCGTCTTGTGGACTGGCAGAGGAAGTGGACGAC...GTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR GCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGCACTCTTGTTGCCCATaGTGCAGTGCAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEHSCCP*CSAMAQ
Trigger: TTGTGCCATTGCACTGCAGCATGGGCAACAAGAGTG...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTAATTCTCTGCTGTCATaGGCACGACATCAGAACGCA +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELANSLLS*ARHQNA
Trigger: TGCGTTCTGATGTCGTGCCCATGACAGCAGAGAATT...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324379.10
ENST00000475350.5
CDS-3UTR CCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGACTTCTTCCCATAGATaGACTTGCCCCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAETSSHR*TCPQCH
Trigger: ATGGCACTGGGGGCAAGTCCATCTATGGGAAGAAGT...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GAGGAGGCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTGGCCAGAGTTGGCCATaGATAGTAGACCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: EEAHSWPHTSICRKTSRPGQSWP*IVDLVP
Trigger: CGGGACCAGGTCTACTATCCATGGCCAACTCTGGCC...AGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGTGTTTGGGCCAGAGTTaGCCATGGATAGTAGACCTG +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAECLGQS*PWIVDL
Trigger: CAGGTCTACTATCCATGGCCAACTCTGGCCCAAACA...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp TCGATGCCTGGTGTGAAGATACATCACCTGACATCTAAGGGGATCGGCCCAAGGCCGTCCTTGCTGCCCTaGGCCTCAATTTGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: SMPGVKIHHLTSKGIGPRPSLLP*ASICRK
Trigger: CTTGCGGCAAATTGAGGCCCAGGGCAGCAAGGACGG...CCTTGGGCCGATCCCCTTAGATGTCAGGTGATGTATCTTCACACCAGGCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp GGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGCTGGCAGTTCCTTCCTaGATATGCAGGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GSSFLDMQGQERRGKQRELAVPS*ICRVKS
Trigger: GCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG...CTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGACTGGCAGTTCCTTCCTaGATATGCAGGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRLAVPS*ICRVKS
Trigger: GCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp TGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGATCTCCACACAGGTCCTaGCCAATCATGGGGACCATG +
Preference number: 4 (lower is better)
Translates to: WQFLPGYAGSRAEGEAERSPHRS*PIMGTM
Trigger: CATGGTCCCCATGATTGGCCAGGACCTGTGTGGAGA...TCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TACACACTCTCTCCTGGTTCTCGTCCAAGCACTGAAGTCAGTGCTATCATCCCCCGCCCACAGAGCCACTaGCTCCACTTCCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: YTLSPGSRPSTEVSAIIPRPQSH*LHFPER
Trigger: CCTCTCTGGGAAGTGGAGCCAGTGGCTCTGTGGGCG...GGGGATGATAGCACTGACTTCAGTGCTTGGACGAGAACCAGGAGAGAGTGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCTCCATGTACACCTCCTaGGTCTCTGCTTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECSMYTS*VSALGG
Trigger: GCCTCCCAAAGCAGAGACCCAGGAGGTGTACATGGA...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475350.5
CDS-3UTR TCA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGGGAATGAACGCAGCATaGAGAACTTTGTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEGMNAA*RTLSST
Trigger: AGTGGACGACAAAGTTCTTCATGCTGCGTTCATTCC...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCCAAAGCCCTTTTCATaGGTGCACAGGCAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECPKPFS*VHRQRK
Trigger: TTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGG...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGACATGTCAGGAAGAACTaGGAGCCATTGGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRHVRKN*EPLVFG
Trigger: CCCAAACACCAATGGCTCTCAGTTCTTCCTGACATG...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGACCCAGCAGCAAATGCTaGGAAAAGCCAGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRPSSKC*EKPVAF
Trigger: AAAAGCCACTGGCTTTTCTCAGCATTTGCTGCTGGG...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGTTGTCGATAGCTGCTaGAGCATCCTCTGCCAACTC +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESVVDSC*SILCQL
Trigger: GAGTTGGCAGAGGATGCTGCAGCAGCTATCGACAAC...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAATCCCAAATGCTGCTTaGTTCAAACAGGCACCCTCG +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRIPNAA*FKQAPS
Trigger: CGAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGAT...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCATCCCAAATGCTGCTTaGTTCAAACAGGCACCCTCG +
Preference number: 4 (lower is better)
Translates to: VPSWICRVKSGGGSRESAIPNAA*FKQAPS
Trigger: CGAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGAT...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp AGGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAATCCCAAATGCTGCTTaGTTCAAACAGGCACCCTCG +
Preference number: 4 (lower is better)
Translates to: RLAVPSWICRVKSGGGSRIPNAA*FKQAPS
Trigger: CGAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGAT...TCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTAGAGGTAGGGCAGAATaGCACCATCCCTCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPRGRAE*HHPSAR
Trigger: TCTTGCTGAGGGATGGTGGCATTCTGCCCTACCTCT...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGAGTCGTCCACTTCCTCTaGCAGTCCACAAGACGCGCT +
Preference number: 4 (lower is better)
Translates to: SPFHECTGSGNSLLSWARVVHFL*QSTRRA
Trigger: AGCGCGTCTTGTGGACTGGCAGAGGAAGTGGACGAC...TCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR GCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTATGCAGACACCTGGATaGAAAACCCCCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESMQTPG*KTPSRM
Trigger: CATCCTGCTGGGGGTTTTGCATCCAGGTGTCTGCAT...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp CACCTCCCCAGAGTATCAGGGAGGAACAGAGTGACAAGGTTGTCACAGGAGTCTCGTACAAGACGCGCTTaGTGGTGGCCATCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: HLPRVSGRNRVTRLSQESRTRRA*WWPSCS
Trigger: CGAGCAAGATGGCCACCACCAAGCGCGTCTTGTACG...AGACTCCTGTGACAACCTTGTCACTCTGTTCCTCCCTGATACTCTGGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCAATTCTCTGCTGTCATaGGCACGACATCAGAACGCA +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRNSLLS*ARHQNA
Trigger: TGCGTTCTGATGTCGTGCCCATGACAGCAGAGAATT...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
CDS-3UTR CCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGACTTCTTCCCATAGATaGACTTGCCCCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPTSSHR*TCPQCH
Trigger: ATGGCACTGGGGGCAAGTCCATCTATGGGAAGAAGT...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTGCCCCTGGCAGTTCCTTCCTaGATATGCAGGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GEESTPNGSKPAELSELPLAVPS*ICRVKS
Trigger: GCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG...GGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGACTGGCAGTTCCTTCCTaGATATGCAGGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: WQFLPGYAGSRAEGEAERLAVPS*ICRVKS
Trigger: GCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG...TCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCCTGACATCGATGCCTaGTGTGAAGATACATCACCT +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRPDIDA*CEDTSP
Trigger: AGGTGATGTATCTTCACACCAGGCATCGATGTCAGG...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TACACACTCTCTCCTGGTTCTCGTCCAAGCACTGAAGTCAGTGCTATCATCCCCAGTCCAGTCGGCACATaGGAGCCAGAGGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: YTLSPGSRPSTEVSAIIPSPVGT*EPEVGQ
Trigger: CTGCCCTACCTCTGGCTCCCATGTGCCGACTGGACT...GGGGATGATAGCACTGACTTCAGTGCTTGGACGAGAACCAGGAGAGAGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp GGAGAGGAGTCCACACCCAATGGCTCCAAACCTGCTGAGCTTTCAGAACTGCCCAGGGAGGGTCTCTTTTaGAAGCTCCATAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GEESTPNGSKPAELSELPREGLF*KLHRGE
Trigger: CTCACCCCTATGGAGCTTCCAAAAGAGACCCTCCCT...GGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCATTGGGTGTGGACTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TCGATGCCTGGTGTGAAGATACATCACCTGACATCTAAGGGGATCGGCCCAAGGAATGGGGAGGCCAGTTaGGACAGGAGCCACACAGTC +
Preference number: 4 (lower is better)
Translates to: SMPGVKIHHLTSKGIGPRNGEAS*DRSHTV
Trigger: GACTGTGTGGCTCCTGTCCCAACTGGCCTCCCCATT...CCTTGGGCCGATCCCCTTAGATGTCAGGTGATGTATCTTCACACCAGGCATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGAGGCAGGAGGATCACTaGAGGTCAAGGGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVRQEDH*RSRVQS
Trigger: GCTTTGAACCCTTGACCTCCAGTGATCCTCCTGCCT...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGGAATGAACGCAGCATaGAGAACTTTGTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: VPSWICRVKSGGGSRESAGMNAA*RTLSST
Trigger: AGTGGACGACAAAGTTCTTCATGCTGCGTTCATTCC...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTTTGGTTTGGCCAAATTaGCACGAATTGTACGTCCAA +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELALVWPN*HELYVQ
Trigger: TTGGACGTACAATTCGTGTCAATTTGGCCAAACCAA...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGATGCTTTGGGAGGCTCTaGCCCTTCTTCCTCTTTATT +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRCFGRL*PFFLFI
Trigger: AATAAAGAGGAAGAAGGGTCAGAGCCTCCCAAAGCA...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp CTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGTGCTTTGGGAGGCTCTaGCCCTTCTTCCTCTTTATT +
Preference number: 4 (lower is better)
Translates to: LAVPSWICRVKSGGGSRECFGRL*PFFLFI
Trigger: AATAAAGAGGAAGAAGGGTCAGAGCCTCCCAAAGCA...CTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGTGCTTTGGGAGGCTCTaGCCCTTCTTCCTCTTTATT +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPCFGRL*PFFLFI
Trigger: AATAAAGAGGAAGAAGGGTCAGAGCCTCCCAAAGCA...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGTACACCTGAGGATTTaGGCGGGCCTTTTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRVHLRI*AGLFSN
Trigger: ATTGCTAAAAAGGCCCGCTCAAATCCTCAGGTGTAC...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000495526.5
CDS-3UTR TCA 90 bp GCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGCCAAAGCCCTTTTCATaGGTGCACAGGCAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: AHSWPHTSICRKTSRPSVPKPFS*VHRQRK
Trigger: TTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGG...CACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR TCA 90 bp GCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGTGCCATTGTGGTTTGTaGAATCACCGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: AHSWPHTSICRKTSRPSVCHCGL*NHRPGT
Trigger: TGTGCCAGGGCGGTGATTTCACAAACCACAATGGCA...CACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR TCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCATGTCAGGAAGAACTaGGAGCCATTGGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECHVRKN*EPLVFG
Trigger: CCCAAACACCAATGGCTCTCAGTTCTTCCTGACATG...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCCAGCAGCAAATGCTaGGAAAAGCCAGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVPSSKC*EKPVAF
Trigger: AAAAGCCACTGGCTTTTCTCAGCATTTGCTGCTGGG...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCTAACACCTGTGACTaGCCTCTGATGGCCATTATT +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPPNTCD*PLMAII
Trigger: AATAATGGCCATCAGAGGTCAGTCACAGGTGTTAGG...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CACCTCCCCAGAGTATCAGGGAGGAACAGAGTGACAAGGTTGTCACAGGAGTCTGTCGTCCACTTCCTCTaGCAGTCCACCCACGTACAA +
Preference number: 4 (lower is better)
Translates to: HLPRVSGRNRVTRLSQESVVHFL*QSTHVQ
Trigger: TTGTACGTGGGTGGACTGGCAGAGGAAGTGGACGAC...AGACTCCTGTGACAACCTTGTCACTCTGTTCCTCCCTGATACTCTGGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGGTTGTCGATAGCTGCTaGAGCATCCTCTGCCAACTC +
Preference number: 4 (lower is better)
Translates to: AHSWPHTSICRKTSRPSVVVDSC*SILCQL
Trigger: GAGTTGGCAGAGGATGCTGCAGCAGCTATCGACAAC...CACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR GCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGAGCCCTTTTCATGAGTaGACAGGCAGCGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPSPFHE*TGSGNS
Trigger: AGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp CTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGGGCACATATCCCAAATaGTGCTTGCTTCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LAVPSWICRVKSGGGSREGTYPK*CLLQTG
Trigger: GCCTGTTTGAAGCAAGCAGCATTTGGGATATGTGCC...CTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TCGATGCCTGGTGTGAAGATACATCACCTGACATCTAAGGGGATCGGCCCAAGGGCTCCAAGAAGTGGCTaGACACAGGAGAGCCAGACT +
Preference number: 4 (lower is better)
Translates to: SMPGVKIHHLTSKGIGPRAPRSG*TQESQT
Trigger: AGTCTGGCTCTCCTGTGTGCAGCCACTTCTTGGAGC...CCTTGGGCCGATCCCCTTAGATGTCAGGTGATGTATCTTCACACCAGGCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCATACCAACCCCTGCCTaGCCATTTGCCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: HSWPHTSICRKTSRPSVTIPTPA*PFAHFH
Trigger: GTGGAAGTGGGCAAATGGGCAGGCAGGGGTTGGTAT...GGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR GCA 90 bp CATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCAGGGATACCAACCCCTaGCTGCCCATTTGCCCACTT +
Preference number: 4 (lower is better)
Translates to: HSWPHTSICRKTSRPSVTRDTNP*LPICPL
Trigger: AAGTGGGCAAATGGGCAGGCAGGGGTTGGTATCCCT...GGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTACTTCTTCCCATAGATaGACTTGCCCCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESTSSHR*TCPQCH
Trigger: ATGGCACTGGGGGCAAGTCCATCTATGGGAAGAAGT...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTTGTTTGGGCCAGAGTTaGCCATGGATAGTAGACCTG +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESCLGQS*PWIVDL
Trigger: CAGGTCTACTATCCATGGCCAACTCTGGCCCAAACA...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTTTCTTTATAACCGCCTaGCTGACCAGCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPFFITA*LTSIWR
Trigger: CCTCCAGATGCTGGTCAGCCAGGCGGTTATAAAGAA...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTCTGTCCTTTTATaGGAGGCTGGCTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRESVLL*EAGCAF
Trigger: AAAAGCACAGCCAGCCTCCCATAAAAGGACAGACTC...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TACACACTCTCTCCTGGTTCTCGTCCAAGCACTGAAGTCAGTGCTATCATCCCCACCCAGGAGGAACACTaGGAGAGGAGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: YTLSPGSRPSTEVSAIIPTQEEH*ERSPHP
Trigger: TGGGTGTGGACTCCTCTCCCAGTGTTCCTCCTGGGT...GGGGATGATAGCACTGACTTCAGTGCTTGGACGAGAACCAGGAGAGAGTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAGGCTCCCCTCCCTTCTaGCCTGGAAGAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPGSPPF*PGRAGS
Trigger: AGACCCTGCTCTTCCAGGCCAGAAGGGAGGGGAGCC...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCAAACCCCCAGCAGGATaGTCTGGGAGAAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECKPPAG*SGRKSG
Trigger: TCCTGATTTTCTCCCAGACCATCCTGCTGGGGGTTT...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCTATGTTGGCCAAGCTaGTCTAGAACTCCTACCTCA +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPLCWPS*SRTPTS
Trigger: TGAGGTAGGAGTTCTAGACCAGCTTGGCCAACATAG...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGGTACACCTGAGGATTTaGGCGGGCCTTTTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVVHLRI*AGLFSN
Trigger: ATTGCTAAAAAGGCCCGCTCAAATCCTCAGGTGTAC...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000495526.5
CDS-3UTR TCA 90 bp AGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACCAAAGCCCTTTTCATaGGTGCACAGGCAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: SPFHECTGSGNSLLSWARPKPFS*VHRQRK
Trigger: TTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGG...TCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR TCA 90 bp GAGGAGGCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTCATGTCAGGAAGAACTaGGAGCCATTGGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EEAHSWPHTSICRKTSRPHVRKN*EPLVFG
Trigger: CCCAAACACCAATGGCTCTCAGTTCTTCCTGACATG...AGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR TCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCACAGACACAATCTCTaGCAACTCCCAAGAACTAGC +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVHRHNL*QLPRTS
Trigger: GCTAGTTCTTGGGAGTTGTCAGAGATTGTGTCTGTG...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCTAGATCCCAGGATCTaGGATGCCTCAAATCAACTT +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPLDPRI*DASNQL
Trigger: AAGTTGATTTGAGGCATCTCAGATCCTGGGATCTAG...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGGGCCAACCAACATGGTaGAACCTCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVGQPTW*NLVSTK
Trigger: TTTAGTAGAGACGAGGTTTCACCATGTTGGTTGGCC...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp ACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCTCTCCAAACACCACAGTCGTCCACTTCCTCTaGCAGTCCACCCACGTACAA +
Preference number: 4 (lower is better)
Translates to: TSICRKTSRPSVTSPNTTVVHFL*QSTHVQ
Trigger: TTGTACGTGGGTGGACTGGCAGAGGAAGTGGACGAC...TGTGGTGTTTGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR GCA 90 bp GACACTCCAACAGCCACAGCACTGATCCTGGGCCTGCCATCCCTGGTTTCAGCCTGCTGCAGCATCCTCTaGCAACTCAAATTCAACAAA +
Preference number: 4 (lower is better)
Translates to: DTPTATALILGLPSLVSACCSIL*QLKFNK
Trigger: TTTGTTGAATTTGAGTTGGCAGAGGATGCTGCAGCA...GGCTGAAACCAGGGATGGCAGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGAGTTGTCGATAGCTGCTaGAGCATCCTCTGCCAACTC +
Preference number: 4 (lower is better)
Translates to: SPFHECTGSGNSLLSWARVVDSC*SILCQL
Trigger: GAGTTGGCAGAGGATGCTGCAGCAGCTATCGACAAC...TCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR GCA 90 bp GCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACCATGTTGTCGATAGCTaGTGCAGCATCCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ALFMSAQAAEILCCHGHDHVVDS*CSILCQ
Trigger: TTGGCAGAGGATGCTGCAGCAGCTATCGACAACATG...GTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR GCA 90 bp CTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGACATATCCCAAATGCTaGTTGCTTCAAACAGGCACC +
Preference number: 4 (lower is better)
Translates to: LAVPSWICRVKSGGGSRETYPKC*LLQTGT
Trigger: GGTGCCTGTTTGAAGCAAGCAGCATTTGGGATATGT...CTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp CACCTCCCCAGAGTATCAGGGAGGAACAGAGTGACAAGGTTGTCACAGGAGTCTCCTGAGTCTCCAGCCTaGTGGTCTGTTGTGCAGATT +
Preference number: 4 (lower is better)
Translates to: HLPRVSGRNRVTRLSQESPESPA*WSVVQI
Trigger: AATCTGCACAACAGACCAGCAGGCTGGAGACTCAGG...AGACTCCTGTGACAACCTTGTCACTCTGTTCCTCCCTGATACTCTGGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTCTGGAGGAAGAATTCTaGTTCCAAACTGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPLEEEF*FQTASE
Trigger: CTCTGAGGCAGTTTGGAAGCAGAATTCTTCCTCCAG...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTCTGATGGCCATTATTTaGACTCAGAGAAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPLMAII*TQRRGC
Trigger: ACAGCCCCTTCTCTGAGTGCAAATAATGGCCATCAG...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCAAAACCACAATGAGATaGCATGTCACACCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAAKTTMR*HVTPVK
Trigger: CTTAACAGGTGTGACATGGCATCTCATTGTGGTTTT...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGAATTCTCTGCTGTCATaGGCACGACATCAGAACGCA +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVNSLLS*ARHQNA
Trigger: TGCGTTCTGATGTCGTGCCCATGACAGCAGAGAATT...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
CDS-3UTR CCA 90 bp GAGGAGGCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTACTTCTTCCCATAGATaGACTTGCCCCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EEAHSWPHTSICRKTSRPTSSHR*TCPQCH
Trigger: ATGGCACTGGGGGCAAGTCCATCTATGGGAAGAAGT...AGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CCA 90 bp ACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCTCTCCAAACACCACAGCGGAAATTCTCTCCTaGGTCTCTGCTTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TSICRKTSRPSVTSPNTTAEILS*VSALGG
Trigger: GCCTCCCAAAGCAGAGACCCAGGAGAGAATTTCCGC...TGTGGTGTTTGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CCA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCGGTAGAAATGTAAAATaGTCCAGCCACTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PSWICRVKSGGGSRESAAGRNVK*SSHCGK
Trigger: TTTTCCACAGTGGCTGGACCATTTTACATTTCTACC...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCTGCCATTGTGGTTTGTaGAATCACCGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LFMSAQAAEILCCHGHDICHCGL*NHRPGT
Trigger: TGTGCCAGGGCGGTGATTTCACAAACCACAATGGCA...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR TCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTAAACAAATGAACCACTaGGAGTACACTTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPKQMNH*EYTCWL
Trigger: CAGCCAGCAAGTGTACTCTCAGTGGTTCATTTGTTT...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTTGGCTTCCTGTCTCCTaGCAAATAGGCATAGTACTT +
Preference number: 4 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPWLPVS*QIGIVL
Trigger: AAGTACTATGCCTATTTGTCAGGAGACAGGAAGCCA...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp CCAGTGGCTTTTTGCACAGCCTGCCCATGGTGGAGGGGAGCACCTGAGCTGGCTTGGTCAACAAGCACATaGAAAGATGTTCAACATCAT +
Preference number: 4 (lower is better)
Translates to: PVAFCTACPWWRGAPELAWSTST*KDVQHH
Trigger: ATGATGTTGAACATCTTTTCATGTGCTTGTTGACCA...AGCCAGCTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCAAAAAGCCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAAACTCCTACCTCAGATaGTCCGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPNSYLR*SAHLGL
Trigger: GAGGCCAAGGTGGGCGGATCATCTGAGGTAGGAGTT...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp GGTAAGGAGGAGGCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTCATGTTGTCGATAGCTaGTGCAGCATCCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GKEEAHSWPHTSICRKTSHVVDS*CSILCQ
Trigger: TTGGCAGAGGATGCTGCAGCAGCTATCGACAACATG...AGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGCCTCCTCCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR GCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCACATATCCCAAATGCTaGTTGCTTCAAACAGGCACC +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECTYPKC*LLQTGT
Trigger: GGTGCCTGTTTGAAGCAAGCAGCATTTGGGATATGT...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCATTCTGCTTCCAAACTaGCTCAGAGCTGAACTGCAA +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECILLPN*LRAELQ
Trigger: TTGCAGTTCAGCTCTGAGGCAGTTTGGAAGCAGAAT...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGATCTCAATCCAAGATaGAAAAGCTCAGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESDLNPR*KSSAQW
Trigger: CCACTGAGCTGAGCTTTTGCATCTTGGATTGAGATC...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AAGGCTCAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTGGGGCATGCCACTaGCCAGCTCTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: KAQIVSILGLGTVMVYFVCGACH*PALGLP
Trigger: GGGGAGCCCCAGAGCTGGGCAGTGGCATGCCCCACA...CACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AAGCCTCAGTTTACCTGTGCAGGGTTCCAGTGTGCATTCAATAACATCTGTGAAGCAGCCAGGTGCAGCTaGTGCATGGTGCGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: KPQFTCAGFQCAFNNICEAARCS*CMVRSR
Trigger: TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGC...TTCACAGATGTTATTGAATGCACACTGGAACCCTGCACAGGTAAACTGAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCTCTCCATGTTTGGGCCAGAGTTaGCCATGGATAGTAGACCTG +
Preference number: 4 (lower is better)
Translates to: WPHTSICRKTSRPSVTSPCLGQS*PWIVDL
Trigger: CAGGTCTACTATCCATGGCCAACTCTGGCCCAAACA...TGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCGCTGAGAAAAGCCAGTaGCTTTTTGCACAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LFMSAQAAEILCCHGHDIAEKSQ*LFAQPA
Trigger: GGCAGGCTGTGCAAAAAGCCACTGGCTTTTCTCAGC...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475350.5
CDS-3UTR CCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTTTACCCTCCATAATGTaGGTAGGCCTCATCCAATCA +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESLPSIM*VGLIQS
Trigger: TGATTGGATGAGGCCTACCCACATTATGGAGGGTAA...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGTATATCCCAGCTACATaGAGCCTGAACTCAGTCAAC +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVYIPAT*SLNSVN
Trigger: GTTGACTGAGTTCAGGCTCCATGTAGCTGGGATATA...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCAAAGTGGTTAATCTTTaGGATCCTTTCCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: SFLDMQGQERRGKQRECRKVVNL*DPFPDS
Trigger: AGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTT...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp GGTAAGGAGGAGGCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTGGAATGAACGCAGCATaGAGAACTTTGTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: GKEEAHSWPHTSICRKTSGMNAA*RTLSST
Trigger: AGTGGACGACAAAGTTCTTCATGCTGCGTTCATTCC...AGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGCCTCCTCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR TCA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCTTGGTTTGGCCAAATTaGCACGAATTGTACGTCCAA +
Preference number: 4 (lower is better)
Translates to: SSFLDMQGQERRGKQRECLVWPN*HELYVQ
Trigger: TTGGACGTACAATTCGTGTCAATTTGGCCAAACCAA...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp CTGTCATGCTGTTGGAGAGGACACTCCAACAGCCACAGCACTGATCCTGGGCCTAAACTGCCTCAGAGCTaGACTGCAACATCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSCCWRGHSNSHSTDPGPKLPQS*TATSVF
Trigger: AAAAACTGATGTTGCAGTTCAGCTCTGAGGCAGTTT...AGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTCCTCTCCAACAGCATGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTTAGTTTCCCATCACTaGACTCTACAAGACTCCATT +
Preference number: 4 (lower is better)
Translates to: GSSFLDMQGQERRGKQRELVSHH*TLQDSI
Trigger: AATGGAGTCTTGTAGAGTTCAGTGATGGGAAACTAA...CTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp GGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGCAACCAGTCATCATCTaGCCAAACTGTTTCATAATC +
Preference number: 4 (lower is better)
Translates to: GSSFLDMQGQERRGKQREQPVII*PNCFII
Trigger: GATTATGAAACAGTTTGGTCAGATGATGACTGGTTG...CTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372835.9
CDS-3UTR TCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAACAATAGTCAAAAGGTaGAAACAATGTGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRTIVKR*KQCASA
Trigger: GGCACTTGCACATTGTTTTCACCTTTTGACTATTGT...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCCATGTTGTCGATAGCTaGTGCAGCATCCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LFMSAQAAEILCCHGHDIHVVDS*CSILCQ
Trigger: TTGGCAGAGGATGCTGCAGCAGCTATCGACAACATG...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR GCA 90 bp AAGGAGGAGGCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGAGCCCTTTTCATGAGTaGACAGGCAGCGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: KEEAHSWPHTSICRKTSRSPFHE*TGSGNS
Trigger: AGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT...CCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGCCTCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CCA 90 bp AAGCCTCAGTTTACCTGTGCAGGGTTCCAGTGTGCATTCAATAACATCTGTGAAACAAGACGCGCTTGGTaGTGGCCATCTTGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: KPQFTCAGFQCAFNNICETRRAW*WPSCSR
Trigger: GCGCGAGCAAGATGGCCACCACCAAGCGCGTCTTGT...TTCACAGATGTTATTGAATGCACACTGGAACCCTGCACAGGTAAACTGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp AGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGAAATTCTCTGCTGTCATaGGCACGACATCAGAACGCA +
Preference number: 4 (lower is better)
Translates to: SPFHECTGSGNSLLSWARNSLLS*ARHQNA
Trigger: TGCGTTCTGATGTCGTGCCCATGACAGCAGAGAATT...TCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR CCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAATTTGTTCTCTTCAGTaGCTGGCAATCCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRICSLQ*LAILFC
Trigger: ACAAAACAGGATTGCCAGCCACTGAAGAGAACAAAT...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp CAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGATGGTCCAGCCACTGTaGAAAATAGTTTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: QFLPGYAGSRAEGEAERVMVQPL*KIVWHF
Trigger: GAAATGCCAAACTATTTTCCACAGTGGCTGGACCAT...CACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCGGAATGAACGCAGCATaGAGAACTTTGTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: LFMSAQAAEILCCHGHDIGMNAA*RTLSST
Trigger: AGTGGACGACAAAGTTCTTCATGCTGCGTTCATTCC...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR TCA 90 bp GCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACTTGGTTTGGCCAAATTaGCACGAATTGTACGTCCAA +
Preference number: 4 (lower is better)
Translates to: ALFMSAQAAEILCCHGHDLVWPN*HELYVQ
Trigger: TTGGACGTACAATTCGTGTCAATTTGGCCAAACCAA...GTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR TCA 90 bp ACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCTCTCCAAACACCACATGCTTTGGGAGGCTCTaGCCCTTCTTCCTCTTTATT +
Preference number: 4 (lower is better)
Translates to: TSICRKTSRPSVTSPNTTCFGRL*PFFLFI
Trigger: AATAAAGAGGAAGAAGGGTCAGAGCCTCCCAAAGCA...TGTGGTGTTTGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR TCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCATGCCATTGTGGTTTGTaGAATCACCGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPCHCGL*NHRPGT
Trigger: TGTGCCAGGGCGGTGATTTCACAAACCACAATGGCA...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAGGACTCCATTACTACTaGAGAGAGACAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPGLHYY*RETGWA
Trigger: AGCCCAGCCTGTCTCTCTTCAGTAGTAATGGAGTCC...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp TTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGGGAGAAAATCAGGAATaGTTACACAGAAAACTATGC +
Preference number: 4 (lower is better)
Translates to: FLPGYAGSRAEGEAERVPGENQE*LHRKLC
Trigger: GCATAGTTTTCTGTGTAATCATTCCTGATTTTCTCC...CGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp AGGCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGCTGCAGCATCCTCTaGCAACTCAAATTCAACAAA +
Preference number: 4 (lower is better)
Translates to: RPIPGHIPQFAARHLGLRCCSIL*QLKFNK
Trigger: TTTGTTGAATTTGAGTTGGCAGAGGATGCTGCAGCA...CCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR GCA 90 bp CTTAAAGCCAAAGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTGTTGTCGATAGCTGCTaGAGCATCCTCTGCCAACTC +
Preference number: 4 (lower is better)
Translates to: LKAKALFMSAQAAEILCCVVDSC*SILCQL
Trigger: GAGTTGGCAGAGGATGCTGCAGCAGCTATCGACAAC...ACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGGCTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR GCA 90 bp CTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACATCGGCACATATCCCAAATaGTGCTTGCTTCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LFMSAQAAEILCCHGHDIGTYPK*CLLQTG
Trigger: GCCTGTTTGAAGCAAGCAGCATTTGGGATATGTGCC...GATGTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475350.5
CDS-3UTR GCA 90 bp ACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCTCTCCAAACACCACACCACATACCTCAATTTaGCGCAAGACATCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: TSICRKTSRPSVTSPNTTPHTSI*RKTSRP
Trigger: AGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGG...TGTGGTGTTTGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CCA 90 bp CTCTTTATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGCACAGCCTGCCCATaGTGGAGGGGAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: LFILFKRLPRKLLQPVIICTACP*WRGAPE
Trigger: CTCAGGTGCTCCCCTCCACCATGGGCAGGCTGTGCA...GATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGTAAATAAATGGACGTaGCTGTGTTCCAATAAAACC +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRVNKWT*LCSNKT
Trigger: GGTTTTATTGGAACACAGCCACGTCCATTTATTTAC...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAAATTTGGCTAGGCCATaGTATCCAGTTTTTAGTCAA +
Preference number: 4 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRNLARP*YPVFSQ
Trigger: TTGACTAAAAACTGGATACCATGGCCTAGCCAAATT...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp CTTAAAGCCAAAGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGTCAGGAAGAACTaGGAGCCATTGGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LKAKALFMSAQAAEILCCHVRKN*EPLVFG
Trigger: CCCAAACACCAATGGCTCTCAGTTCTTCCTGACATG...ACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGGCTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475350.5
CDS-3UTR GCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCACATGTTGTCGATAGCTaGTGCAGCATCCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPHVVDS*CSILCQ
Trigger: TTGGCAGAGGATGCTGCAGCAGCTATCGACAACATG...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp AAGCCTCAGTTTACCTGTGCAGGGTTCCAGTGTGCATTCAATAACATCTGTGAAAAGCCAGTGGCTTTTTaGACAGCCTGCCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KPQFTCAGFQCAFNNICEKPVAF*TACPWW
Trigger: CCACCATGGGCAGGCTGTGCAAAAAGCCACTGGCTT...TTCACAGATGTTATTGAATGCACACTGGAACCCTGCACAGGTAAACTGAGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAAGCAGCTGCTGCATGGTaGGTAGCCGAAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQAAAAW*VAEAGG
Trigger: GCCACCTGCTTCGGCTACGCACCATGCAGCAGCTGC...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTCAAAACAAAATGCTGTaGATGAAAGGAGGTTATCAC +
Preference number: 4 (lower is better)
Translates to: AVPSWICRVKSGGGSRESQNKML*MKGGYH
Trigger: GTGATAACCTCCTTTCATGCACAGCATTTTGTTTTG...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp CTTAAAGCCAAAGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTTGTTTGGGCCAGAGTTaGCCATGGATAGTAGACCTG +
Preference number: 4 (lower is better)
Translates to: LKAKALFMSAQAAEILCCCLGQS*PWIVDL
Trigger: CAGGTCTACTATCCATGGCCAACTCTGGCCCAAACA...ACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGGCTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475350.5
CDS-3UTR CCA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAACACTCCCCAGGGCTGTaGACCCTGCCGCCACAGATT +
Preference number: 4 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQHSPGL*TLPPQI
Trigger: AATCTGTGGCGGCAGGGTCCACAGCCCTGGGGAGTG...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAACCCTGTGCCCAGTCCTaGTGCTGGTCCAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQPCAQS*CWSSNG
Trigger: CCCATTGCTGGACCAGCACCAGGACTGGGCACAGGG...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp ACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCTCTCCAAACACCACATTGGTTTGGCCAAATTaGCACGAATTGTACGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSICRKTSRPSVTSPNTTLVWPN*HELYVQ
Trigger: TTGGACGTACAATTCGTGTCAATTTGGCCAAACCAA...TGTGGTGTTTGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR TCA 90 bp AAAAAGCTCAGATTCATTCATGTTGTCGATAGCTGCTGCAGCATCCTCTGCCAACCAAAGCCCTTTTCATaGGTGCACAGGCAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: KKLRFIHVVDSCCSILCQPKPFS*VHRQRK
Trigger: TTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGG...TTGGCAGAGGATGCTGCAGCAGCTATCGACAACATGAATGAATCTGAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475350.5
CDS-3UTR GCA 90 bp CTTAAAGCCAAAGCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTAGCCCTTTTCATGAGTaGACAGGCAGCGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: LKAKALFMSAQAAEILCCSPFHE*TGSGNS
Trigger: AGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT...ACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGGCTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000475350.5
CDS-3UTR GCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAAGCCCTTTTCATGAGTaGACAGGCAGCGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPSPFHE*TGSGNS
Trigger: AGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCCCCTGGGCCTCAATTTaGCGCAAGACATCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTPWASI*RKTSRP
Trigger: AGGCCTAGATGTCTTGCGGCAAATTGAGGCCCAGGG...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCGTTCCTTCCTGGATATaGAGGGTCAAGAGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTVPSWI*RVKSGG
Trigger: CCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp AAGCCTCAGTTTACCTGTGCAGGGTTCCAGTGTGCATTCAATAACATCTGTGAATCCTTCTTCAGAGGTTaGCGTGAGGCTGCCATGACT +
Preference number: 4 (lower is better)
Translates to: KPQFTCAGFQCAFNNICESFFRG*REAAMT
Trigger: AGTCATGGCAGCCTCACGGCAACCTCTGAAGAAGGA...TTCACAGATGTTATTGAATGCACACTGGAACCCTGCACAGGTAAACTGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp AAGGCTCAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGGCTGACCAGCATCTaGAGGGGGAGTGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: KAQIVSILGLGTVMVYFVWLTSI*RGSGEK
Trigger: CTTCTCTCCACTCCCCCTCCAGATGCTGGTCAGCCA...CACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTGAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAAGACTGCAACAGATGCTaGGAGCACCTGGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQDCNRC*EHLEAA
Trigger: AGCCGCCTCCAGGTGCTCCCAGCATCTGTTGCAGTC...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCTGCCATTGTGGTTTGTaGAATCACCGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTCHCGL*NHRPGT
Trigger: TGTGCCAGGGCGGTGATTTCACAAACCACAATGGCA...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474804.5
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp AAGCCTCAGTTTACCTGTGCAGGGTTCCAGTGTGCATTCAATAACATCTGTGAAGTCAACTGTAGCAGCTaGAGCTCACAAAGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: KPQFTCAGFQCAFNNICEVNCSS*SSQSPV
Trigger: GACTGGACTTTGTGAGCTCCAGCTGCTACAGTTGAC...TTCACAGATGTTATTGAATGCACACTGGAACCCTGCACAGGTAAACTGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp AAGGCTCAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGGTGCTGGTCCAGCAATaGGAATGTGGAATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KAQIVSILGLGTVMVYFVVLVQQ*ECGMGR
Trigger: CCTCCCCATTCCACATTCCCATTGCTGGACCAGCAC...CACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCGTAATCCCAGTGCTTTaGGAGGTCAAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTVIPVL*EVKAGG
Trigger: TCCTCCTGCCTTGACCTCCCAAAGCACTGGGATTAC...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR CAA 72 bp AACAGGCAGTGGGCTGGATTAGGCACATGTAGTTTGTaGGCTTCCTGTCTCCTGACAAATAGGCATAGTACT +
Preference number: 4 (lower is better)
Translates to: NRQWAGLGTCSL*ASCLLTNRHST
Trigger: AGTACTATGCCTATTTGTCAGGAGACAGGAAGCCAACAAACTACATGTGCCTAATCCAGCCCACTGCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAATGGCTCCAAACCTGCTaGGCTTTCAGAACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQWLQTC*AFRTAH
Trigger: GTGGGCAGTTCTGAAAGCTCAGCAGGTTTGGAGCCA...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCACTTCTTCCCATAGATaGACTTGCCCCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTTSSHR*TCPQCH
Trigger: ATGGCACTGGGGGCAAGTCCATCTATGGGAAGAAGT...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474804.5
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CCA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGGAAGCAGTAAGAACCTaGGAAAGGCTCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQEAVRT*ERLTAQ
Trigger: CTGAGCAGTGAGCCTTTCCCAGGTTCTTACTGCTTC...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR CAA 72 bp AAAAACAGGCAGTGGGCTGGATTAGGCACATGTAGTTaGTTGGCTTCCTGTCTCCTGACAAATAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: KNRQWAGLGTCS*LASCLLTNRHS
Trigger: ACTATGCCTATTTGTCAGGAGACAGGAAGCCAACAAACTACATGTGCCTAATCCAGCCCACTGCCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCGTACACCTGAGGATTTaGGCGGGCCTTTTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTVHLRI*AGLFSN
Trigger: ATTGCTAAAAAGGCCCGCTCAAATCCTCAGGTGTAC...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474804.5
ENST00000495526.5
CDS-3UTR TCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCATTATATACTGAATGTTaGGGAATTCAGCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPLYTEC*GIQPCP
Trigger: AGGGCAAGGCTGAATTCCTCAACATTCAGTATATAA...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCAGCCCTTTTCATGAGTaGACAGGCAGCGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTSPFHE*TGSGNS
Trigger: AGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474804.5
ENST00000475350.5
ENST00000495526.5
CDS-3UTR GCA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAGAAAGCATTATGCTATaGAAAATCAACAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPESIML*KINKAW
Trigger: CCACGCCTTGTTGATTTTGCATAGCATAATGCTTTC...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp AAGGCTCAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGACTTCTTCCCATAGATaGACTTGCCCCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KAQIVSILGLGTVMVYFVTSSHR*TCPQCH
Trigger: ATGGCACTGGGGGCAAGTCCATCTATGGGAAGAAGT...CACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTGAGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CCA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGAGTTTGAGACCAGCCTaGCCAACCAACATGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQSLRPA*PTNMVK
Trigger: TTTCACCATGTTGGTTGGCCAGGCTGGTCTCAAACT...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAATTCTCGTCCAAGCACTaGAGTCAGTGCTATCATCCC +
Preference number: 4 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQFSSKH*SQCYHP
Trigger: GGGATGATAGCACTGACTTCAGTGCTTGGACGAGAA...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AAGGCTCAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGAGCCCTTTTCATGAGTaGACAGGCAGCGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: KAQIVSILGLGTVMVYFVSPFHE*TGSGNS
Trigger: AGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGCT...CACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTGAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAATGCAGATTGCAGACTTaGCAGCTCCTACCACTGCTT +
Preference number: 4 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQCRLQT*QLLPLL
Trigger: AAGCAGTGGTAGGAGCTGGCAAGTCTGCAATCTGCA...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR GCA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGACAATCTCAGTTCACTaGAACTTCCACCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQTISVH*NFHLLG
Trigger: ACCCAAGAGGTGGAAGTTGCAGTGAACTGAGATTGT...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR CAA 72 bp AATCTTAAGCTGGTAAAAGCCAAGAAGCAACTCAATTaGCACTCCAAAAGCTCAGAGGAAAGGGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NLKLVKAKKQLN*HSKSSEERVQV
Trigger: TACCTGCACCCTTTCCTCTGAGCTTTTGGAGTGCAAATTGAGTTGCTTCTTGGCTTTTACCAGCTTAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
3UTR CAA 72 bp CTGGCCAGGACTATAGGAGATTCTGTTGAAGGGGGATaGAATATACATGTTCGAGCTCTGTTCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LARTIGDSVEGG*NIHVRALFPFK
Trigger: TTTAAAAGGGAACAGAGCTCGAACATGTATATTCAATCCCCCTTCAACAGAATCTCCTATAGTCCTGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCTTGGTTTGGCCAAATTaGCACGAATTGTACGTCCAA +
Preference number: 4 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTLVWPN*HELYVQ
Trigger: TTGGACGTACAATTCGTGTCAATTTGGCCAAACCAA...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474804.5
ENST00000475350.5
ENST00000495526.5
CDS-3UTR TCA 90 bp TTCATAGACACAAAGATTAGAGGTTATCAGAAGCTAAGGGGAGGAGAAAATGGGAGCCACAAAAAGGAATaGGGCACTGATACATGGTAC +
Preference number: 4 (lower is better)
Translates to: FIDTKIRGYQKLRGGENGSHKKE*GTDTWY
Trigger: GTACCATGTATCAGTGCCTCATTCCTTTTTGTGGCT...CCCATTTTCTCCTCCCCTTAGCTTCTGATAACCTCTAATCTTTGTGTCTATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp CTCTTTATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCCTCCCCTTAACAAGATaGAGACACCTGGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: LFILFKRLPRKLLQPVIILPLTR*RHLDAK
Trigger: TTTTGCATCCAGGTGTCTGCATCTTGTTAAGGGGAG...GATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR GCA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGAGAAGCAACTCAATTTaGACTCCAAAAGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQRSNSI*TPKAQR
Trigger: CCTCTGAGCTTTTGGAGTGCAAATTGAGTTGCTTCT...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CCA 90 bp AAGGCTCAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGCATAAAAACAGGCAGTaGGCTGGATTAGGCACATGT +
Preference number: 4 (lower is better)
Translates to: KAQIVSILGLGTVMVYFVHKNRQ*AGLGTC
Trigger: ACATGTGCCTAATCCAGCCCACTGCCTGTTTTTATG...CACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTGAGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR TCA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGAAGATGTGGAAAAACTaGAACACTCATACATTGCTG +
Preference number: 4 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQKMWKN*NTHTLL
Trigger: CAGCAATGTATGAGTGTTTCAGTTTTTCCACATCTT...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR TCA 90 bp TTCATAGACACAAAGATTAGAGGTTATCAGAAGCTAAGGGGAGGAGAAAATGGGTACAAGGATGAACCTTaGAAGCATTATGCTATGCAA +
Preference number: 4 (lower is better)
Translates to: FIDTKIRGYQKLRGGENGYKDEP*KHYAMQ
Trigger: TTGCATAGCATAATGCTTTCAAGGTTCATCCTTGTA...CCCATTTTCTCCTCCCCTTAGCTTCTGATAACCTCTAATCTTTGTGTCTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS CCA 90 bp GCCTCGGGTTTGTGTCAACATCCGAGGCCGGAGACTGGCGGCGGCTaGGGACCGGCTCCGTCTGCGGGACGGGAAAACGGGAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ASGLCQHPRPETGGG*GPAPSAGRENGRVG
Trigger: CCCCACCCTCCCGTTTTCCCGTCCCGCAGACGGAGCCGGTCCCCAGCCGCCGCCAGTCTCCGGCCTCGGATGTTGACACAAACCCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470018.5
CDS GCA 90 bp AGGGTTCCTTCCCACAGCCTTGTGTCAGGAGCTCTCAGACGCCAGTaGAGCCCAGGCGGCCGGCCCGGGCTGTGGGGAGACCCCCAAGTG +
Preference number: 5 (lower is better)
Translates to: RVPSHSLVSGALRRQ*SPGGRPGLWGDPQV
Trigger: CACTTGGGGGTCTCCCCACAGCCCGGGCCGGCCGCCTGGGCTGCACTGGCGTCTGAGAGCTCCTGACACAAGGCTGTGGGAAGGAACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470018.5
CDS CCA 90 bp AGTGTAAACCGCCTCGGGTTTGTGTCAACATCCGAGGCCGGAGACTaGCGGCGGCTGGGGACCGGCTCCGTCTGCGGGACGGGAAAACGG +
Preference number: 5 (lower is better)
Translates to: SVNRLGFVSTSEAGD*RRLGTGSVCGTGKR
Trigger: CCGTTTTCCCGTCCCGCAGACGGAGCCGGTCCCCAGCCGCCGCCAGTCTCCGGCCTCGGATGTTGACACAAACCCGAGGCGGTTTACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470018.5
CDS TCA 90 bp GCACAGCCAGAGCTATCGCCAGCACTACCGCCAGAGACCCGGCCTTaGCAGCAGCTCGCCGTCCTCCTGGTTCAGAGATGCGTCCCACCC +
Preference number: 5 (lower is better)
Translates to: AQPELSPALPPETRP*QQLAVLLVQRCVPP
Trigger: GGGTGGGACGCATCTCTGAACCAGGAGGACGGCGAGCTGCTGTCAAGGCCGGGTCTCTGGCGGTAGTGCTGGCGATAGCTCTGGCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480169.1
CDS-3UTR CAA 90 bp AGCTGCTGCATGGTGCGTAGCCGAAGCAGGTGGCCAGGCTGTGGGGCATGCCACAGGGGGTGGGACCATTaGTTCTCTTCAGTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SCCMVRSRSRWPGCGACHRGWDH*FSSVAG
Trigger: GCCAGCCACTGAAGAGAACAAATGGTCCCACCCCCT...GTGGCATGCCCCACAGCCTGGCCACCTGCTTCGGCTACGCACCATGCAGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCGAGCAGCAAATGGTGTaGGCAGCAGGGCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: PSWICRVKSGGGSRESAAEQQMV*AAGHRD
Trigger: GTCCCTGTGCCCTGCTGCCAACACCATTTGCTGCTC...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CAA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCTTTGGCTTCCCGTCCTaGCTGCCCTGGGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: PSWICRVKSGGGSRESAAFGFPS*LPWASI
Trigger: AATTGAGGCCCAGGGCAGCAAGGACGGGAAGCCAAA...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp GACACTCCAACAGCCACAGCACTGATCCTGGGCCTGCCATCCCTGGTTTCAGCCGAATGGGGAGGCCAGTaGGGACAGGAGCCACACAGT +
Preference number: 5 (lower is better)
Translates to: DTPTATALILGLPSLVSAEWGGQ*GQEPHS
Trigger: ACTGTGTGGCTCCTGTCCCAACTGGCCTCCCCATTC...GGCTGAAACCAGGGATGGCAGGCCCAGGATCAGTGCTGTGGCTGTTGGAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp GCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCTCACACGTACTCCGTGTTTGGGCCAGAGTaGGCCATGGATAGTAGACCT +
Preference number: 5 (lower is better)
Translates to: AGSRAEGEAERVPPHTYSVFGPE*AMDSRP
Trigger: AGGTCTACTATCCATGGCCAACTCTGGCCCAAACAC...GGAGTACGTGTGAGGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCCAGCCTGCTGGTCTGTaGTGCAGATTGCAGACTTGC +
Preference number: 5 (lower is better)
Translates to: PSWICRVKSGGGSRESAAQPAGL*CRLQTC
Trigger: GCAAGTCTGCAATCTGCACAACAGACCAGCAGGCTG...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGGCGGCTGTCATGCTGTaGGAGAGGACACTCCAACAG +
Preference number: 5 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEAAVML*ERTLQQ
Trigger: CTGTTGGAGTGTCCTCTCCAACAGCATGACAGCCGC...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp AGGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAACGTACAAGACGCGCTaGGTGGTGGCCATCTTGCTC +
Preference number: 5 (lower is better)
Translates to: RLAVPSWICRVKSGGGSRTYKTR*VVAILL
Trigger: GAGCAAGATGGCCACCACCAAGCGCGTCTTGTACGT...TCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp CTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGTCCTGGGTCTCTGCTTaGGGAGGCTCTGACCCTTCT +
Preference number: 5 (lower is better)
Translates to: LAVPSWICRVKSGGGSRESWVSA*GGSDPS
Trigger: AGAAGGGTCAGAGCCTCCCAAAGCAGAGACCCAGGA...CTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp AGGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGATTTGGCTTCCCGTCCTaGCTGCCCTGGGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: RLAVPSWICRVKSGGGSRFGFPS*LPWASI
Trigger: AATTGAGGCCCAGGGCAGCAAGGACGGGAAGCCAAA...TCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCTTTGGCTTCCCGTCCTaGCTGCCCTGGGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: VPSWICRVKSGGGSRESAFGFPS*LPWASI
Trigger: AATTGAGGCCCAGGGCAGCAAGGACGGGAAGCCAAA...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAAAGCCAGTGGCTTTTaGCACAGCCTGCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEKASGF*HSLPMV
Trigger: CACCATGGGCAGGCTGTGCAAAAAGCCACTGGCTTT...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp TGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCTCTCCACCCCTGCCTGCCCATTaGCCCACTTCCACCCCGGAA +
Preference number: 5 (lower is better)
Translates to: WPHTSICRKTSRPSVTSPPLPAH*PTSTPE
Trigger: TTCCGGGGTGGAAGTGGGCAAATGGGCAGGCAGGGG...TGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CAA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCTTTGGCTTCCCGTCCTaGCTGCCCTGGGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: SSFLDMQGQERRGKQRECFGFPS*LPWASI
Trigger: AATTGAGGCCCAGGGCAGCAAGGACGGGAAGCCAAA...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp CTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAAAGCCAGTGGCTTTTaGCACAGCCTGCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: LAVPSWICRVKSGGGSREKASGF*HSLPMV
Trigger: CACCATGGGCAGGCTGTGCAAAAAGCCACTGGCTTT...CTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp GCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTCCACTGAGAGTACACTaGCTGGCTGTAAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: AVPSWICRVKSGGGSRESPLRVH*LAVRPA
Trigger: TGCCGGCCTTACAGCCAGCAAGTGTACTCTCAGTGG...ACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp AGGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAATGGGGGTCTCTACATaGCCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: RLAVPSWICRVKSGGGSRMGVST*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAATGTAGAGACCCCCAT...TCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCAGAAGGGGCTGTGCTTaGAGGGAGGGTCTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: VPSWICRVKSGGGSRESARRGCA*REGLFW
Trigger: CCAAAAGAGACCCTCCCTCAAAGCACAGCCCCTTCT...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCTGGAAGAGCAGGGTCTaGTCTCCTGTGTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VPSWICRVKSGGGSRESAWKSRV*SPVSLH
Trigger: GTGGAGAGACACAGGAGACAAGACCCTGCTCTTCCA...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp GCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGATGTAATCCCAGTGCTTaGGGAGGTCAAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: AGSSFLDMQGQERRGKQRCNPSA*GGQGRR
Trigger: CCTCCTGCCTTGACCTCCCAAAGCACTGGGATTACA...TCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CAA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGTATCCCAAATGCTGCTaGCTTCAAACAGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAEYPKCC*LQTGTL
Trigger: GAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGATA...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp AGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCGTGTTTGGGCCAGAGTaGGCCATGGATAGTAGACCT +
Preference number: 5 (lower is better)
Translates to: SSFLDMQGQERRGKQRECVFGPE*AMDSRP
Trigger: AGGTCTACTATCCATGGCCAACTCTGGCCCAAACAC...GCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324379.10
ENST00000372835.9
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp GGTCAGAGTTTTCCCGAGGCAGCCAGGTGCAGCTGCTGCATGGTGCGTAGCCGAAGCTCCTACCACTGCTaGAGCCAGTTCCTTAAAATA +
Preference number: 5 (lower is better)
Translates to: GQSFPEAARCSCCMVRSRSSYHC*SQFLKI
Trigger: TATTTTAAGGAACTGGCTCAAGCAGTGGTAGGAGCT...TCGGCTACGCACCATGCAGCAGCTGCACCTGGCTGCCTCGGGAAAACTCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp GGCTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAACAGAGTGACAAGGTaGTCACAGGAGTCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GWQFLPGYAGSRAEGEAENRVTR*SQESVL
Trigger: AAGGACAGACTCCTGTGACAACCTTGTCACTCTGTT...CTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS GCA 90 bp CATGATTTGTCCTCCCTTAATCCCTGGGCCTCTACCAGTAAGCTATaGAGCCACCCCAAAGCCACCTGTGGGTTTCAGGGAACTCACACC +
Preference number: 5 (lower is better)
Translates to: HDLSSLNPWASTSKL*SHPKATCGFQGTHT
Trigger: GGTGTGAGTTCCCTGAAACCCACAGGTGGCTTTGGGGTGGCTGCATAGCTTACTGGTAGAGGCCCAGGGATTAAGGGAGGACAAATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482751.5
CDS-3UTR CAA 90 bp TCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCTCAGATTCATTCATGTaGTCGATAGCTGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SFLDMQGQERRGKQRECRSDSFM*SIAAAA
Trigger: TGCTGCAGCAGCTATCGACAACATGAATGAATCTGA...GCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324379.10
ENST00000475350.5
CDS-3UTR CAA 90 bp GCCCATTCCTGGCCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGGTGTTTGGGCCAGAGTaGGCCATGGATAGTAGACCT +
Preference number: 5 (lower is better)
Translates to: AHSWPHTSICRKTSRPSVVFGPE*AMDSRP
Trigger: AGGTCTACTATCCATGGCCAACTCTGGCCCAAACAC...CACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGGCCAGGAATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CAA 90 bp CCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCGCCAAGAAGCAACTCAATTaGCACTCCAAAAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PSWICRVKSGGGSRESAAKKQLN*HSKSSE
Trigger: CTCTGAGCTTTTGGAGTGCAAATTGAGTTGCTTCTT...GGCGGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CAA 90 bp GTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGAGTGCCTCAGATTCATTCATGTaGTCGATAGCTGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VPSWICRVKSGGGSRESASDSFM*SIAAAA
Trigger: TGCTGCAGCAGCTATCGACAACATGAATGAATCTGA...GGCACTCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324379.10
ENST00000475350.5
CDS-3UTR CAA 90 bp GCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACTATCCCAAATGCTGCTaGCTTCAAACAGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: ALFMSAQAAEILCCHGHDYPKCC*LQTGTL
Trigger: GAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGATA...GTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475350.5
CDS-3UTR CAA 90 bp CTGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGTCTGTTGAAGGGGGATaGAATATACATGTTCGAGCT +
Preference number: 5 (lower is better)
Translates to: LAVPSWICRVKSGGGSRESVEGG*NIHVRA
Trigger: AGCTCGAACATGTATATTCAATCCCCCTTCAACAGA...CTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CAA 90 bp TGGCAGTTCCTTCCTGGATATGCAGGGTCAAGAGCGGAGGGGGAAGCAGAGAGATGCAACCTTGTAACTTaGGAAGTCCAGAACACTGAT +
Preference number: 5 (lower is better)
Translates to: WQFLPGYAGSRAEGEAERCNLVT*EVQNTD
Trigger: ATCAGTGTTCTGGACTTCCAAAGTTACAAGGTTGCA...TCTCTCTGCTTCCCCCTCCGCTCTTGACCCTGCATATCCAGGAAGGAACTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CAA 90 bp ATTTTAGCAAAGAAAACACGTAAGAGCCACACTGGTAGTCCCAGGAGAGGCCCAGTGTTTGGGCCAGAGTaGGCCATGGATAGTAGACCT +
Preference number: 5 (lower is better)
Translates to: ILAKKTRKSHTGSPRRGPVFGPE*AMDSRP
Trigger: AGGTCTACTATCCATGGCCAACTCTGGCCCAAACAC...TGGGCCTCTCCTGGGACTACCAGTGTGGCTCTTACGTGTTTTCTTTGCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324379.10
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp GCCCTTTTCATGAGTGCACAGGCAGCGGAAATTCTCTGCTGTCATGGGCACGACTGCAACCTTGTAACTTaGGAAGTCCAGAACACTGAT +
Preference number: 5 (lower is better)
Translates to: ALFMSAQAAEILCCHGHDCNLVT*EVQNTD
Trigger: ATCAGTGTTCTGGACTTCCAAAGTTACAAGGTTGCA...GTCGTGCCCATGACAGCAGAGAATTTCCGCTGCCTGTGCACTCATGAAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474804.5
CDS-3UTR CAA 90 bp CCACATACCTCAATTTGCCGCAAGACATCTAGGCCTTCGGTGACCTCTCCAAACTCAGATTCATTCATGTaGTCGATAGCTGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PHTSICRKTSRPSVTSPNSDSFM*SIAAAA
Trigger: TGCTGCAGCAGCTATCGACAACATGAATGAATCTGA...GTTTGGAGAGGTCACCGAAGGCCTAGATGTCTTGCGGCAAATTGAGGTATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470213.5
CDS-3UTR CAA 90 bp TTCATAGACACAAAGATTAGAGGTTATCAGAAGCTAAGGGGAGGAGAAAATGGGGTCCACAAGACGCGCTaGGTGGTGGCCATCTTGCTC +
Preference number: 5 (lower is better)
Translates to: FIDTKIRGYQKLRGGENGVHKTR*VVAILL
Trigger: GAGCAAGATGGCCACCACCAAGCGCGTCTTGTGGAC...CCCATTTTCTCCTCCCCTTAGCTTCTGATAACCTCTAATCTTTGTGTCTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CAA 90 bp TATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTGACCAAAGCCAGTGGCTTTTaGCACAGCCTGCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: YSLQASSQKTSSTSHHLTKASGF*HSLPMV
Trigger: CACCATGGGCAGGCTGTGCAAAAAGCCACTGGCTTT...GGTCAGATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475350.5
ENST00000495526.5
CDS-3UTR CAA 90 bp AAGCCTCAGTTTACCTGTGCAGGGTTCCAGTGTGCATTCAATAACATCTGTGAAGGCACATGTAGTTTGTaGGCTTCCTGTCTCCTGACA +
Preference number: 5 (lower is better)
Translates to: KPQFTCAGFQCAFNNICEGTCSL*ASCLLT
Trigger: TGTCAGGAGACAGGAAGCCAACAAACTACATGTGCC...TTCACAGATGTTATTGAATGCACACTGGAACCCTGCACAGGTAAACTGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp TTCATAGACACAAAGATTAGAGGTTATCAGAAGCTAAGGGGAGGAGAAAATGGGGTGTTTGGGCCAGAGTaGGCCATGGATAGTAGACCT +
Preference number: 5 (lower is better)
Translates to: FIDTKIRGYQKLRGGENGVFGPE*AMDSRP
Trigger: AGGTCTACTATCCATGGCCAACTCTGGCCCAAACAC...CCCATTTTCTCCTCCCCTTAGCTTCTGATAACCTCTAATCTTTGTGTCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CAA 90 bp TTCATAGACACAAAGATTAGAGGTTATCAGAAGCTAAGGGGAGGAGAAAATGGGTATCCCAAATGCTGCTaGCTTCAAACAGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: FIDTKIRGYQKLRGGENGYPKCC*LQTGTL
Trigger: GAGGGTGCCTGTTTGAAGCAAGCAGCATTTGGGATA...CCCATTTTCTCCTCCCCTTAGCTTCTGATAACCTCTAATCTTTGTGTCTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS-3UTR CAA 90 bp CTCTTTATTCTCTTCAAGCGTCTTCCCAGAAAACTTCTTCAACCAGTCATCATCTTGAGGAATTCAGCCTaGCCCTCATCTCCCCTTAAC +
Preference number: 5 (lower is better)
Translates to: LFILFKRLPRKLLQPVIILRNSA*PSSPLN
Trigger: GTTAAGGGGAGATGAGGGCAAGGCTGAATTCCTCAA...GATGATGACTGGTTGAAGAAGTTTTCTGGGAAGACGCTTGAAGAGAATAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS GCA 90 bp AAAGAGCACTTCCTGGCTGATTTTAGAGCTGGTGGTGCAACAATTTaGCATCTAGTTGAAGGCACAAGAAATAATCACTACTTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: KEHFLADFRAGGATI*HLVEGTRNNHYFQA
Trigger: TGCCTGGAAGTAGTGATTATTTCTTGTGCCTTCAACTAGATGGCAAATTGTTGCACCACCAGCTCTAAAATCAGCCAGGAAGTGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456578.6
CDS-3UTR CAA 90 bp CAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGTGTCAATCTGATGGCCATTATTaGCACTCAGAGAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QIVSILGLGTVMVYFVCQSDGHY*HSEKGL
Trigger: CAGCCCCTTCTCTGAGTGCAAATAATGGCCATCAGA...TTGACACACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS TCA 90 bp CTCTCTGGAAGCATCAGCCTAAGGCCCAAAAACCTAACCAAATGGTaGAAAGCTTCCTTTGTAATCAGTAACAACATCACAAACCAAGGA +
Preference number: 5 (lower is better)
Translates to: LSGSISLRPKNLTKW*KASFVISNNITNQG
Trigger: TCCTTGGTTTGTGATGTTGTTACTGATTACAAAGGAAGCTTTTCACCATTTGGTTAGGTTTTTGGGCCTTAGGCTGATGCTTCCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456578.6
CDS-3UTR CAA 90 bp AAGGCTCAGATAGTAAGTATTTTAGGCCTTGGGACTGTGATGGTCTATTTTGTGATTTTGTGTGTCAATTaGGCTAGGCCATGGTATCCA +
Preference number: 5 (lower is better)
Translates to: KAQIVSILGLGTVMVYFVILCVN*ARPWYP
Trigger: TGGATACCATGGCCTAGCCAAATTGACACACAAAAT...CACAAAATAGACCATCACAGTCCCAAGGCCTAAAATACTTACTATCTGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324379.10
CDS-3UTR CAA 90 bp AAAGCCCATTTAAGAAAGTGGTTAATCTTTGGGATCCTTTCCCTGACTCTGCAGGGAAAAGGACAGCTATaGTATGATTCCACTTACATG +
Preference number: 5 (lower is better)
Translates to: KAHLRKWLIFGILSLTLQGKGQL*YDSTYM
Trigger: CATGTAAGTGGAATCATACAATAGCTGTCCTTTTCC...CTGCAGAGTCAGGGAAAGGATCCCAAAGATTAACCACTTTCTTAAATGGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495526.5
CDS CCA 72 bp CGCCTCGGGTTTGTGTCAACATCCGAGGCCGGAGACTaGCGGCGGCTGGGGACCGGCTCCGTCTGCGGGACG +
Preference number: 6 (lower is better)
Translates to: RLGFVSTSEAGD*RRLGTGSVCGT
Trigger: CGTCCCGCAGACGGAGCCGGTCCCCAGCCGCCGCCAGTCTCCGGCCTCGGATGTTGACACAAACCCGAGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470018.5
CDS GCA 72 bp TCCCACAGCCTTGTGTCAGGAGCTCTCAGACGCCAGTaGAGCCCAGGCGGCCGGCCCGGGCTGTGGGGAGAC +
Preference number: 6 (lower is better)
Translates to: SHSLVSGALRRQ*SPGGRPGLWGD
Trigger: GTCTCCCCACAGCCCGGGCCGGCCGCCTGGGCTGCACTGGCGTCTGAGAGCTCCTGACACAAGGCTGTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470018.5
CDS CCA 72 bp TTGTGTCAACATCCGAGGCCGGAGACTGGCGGCGGCTaGGGACCGGCTCCGTCTGCGGGACGGGAAAACGGG +
Preference number: 6 (lower is better)
Translates to: LCQHPRPETGGG*GPAPSAGRENG
Trigger: CCCGTTTTCCCGTCCCGCAGACGGAGCCGGTCCCCAGCCGCCGCCAGTCTCCGGCCTCGGATGTTGACACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470018.5
CDS GCA 72 bp GTCCGCCCCGACTTTCGACAGATCCTTAGAAGTCCCTaGCCCGCACGTGGCCCAGCCCGGGGATGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: VRPDFRQILRSP*PARGPARGCLA
Trigger: AGCCAGACATCCCCGGGCTGGGCCACGTGCGGGGCAGGGACTTCTAAGGATCTGTCGAAAGTCGGGGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470018.5
CDS CCA 72 bp CAGGTGCGGTGGCTCACCCTGACAGGTGATGGCAGCTaGACGGGGCAGGTGGTCCAAGGCAGCATGGAGGTG +
Preference number: 6 (lower is better)
Translates to: QVRWLTLTGDGS*TGQVVQGSMEV
Trigger: CACCTCCATGCTGCCTTGGACCACCTGCCCCGTCCAGCTGCCATCACCTGTCAGGGTGAGCCACCGCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467741.2
CDS CAA 90 bp AGCACAGCCAGAGCTATCGCCAGCACTACCGCCAGAGACCCGGCCTaGACAGCAGCTCGCCGTCCTCCTGGTTCAGAGATGCGTCCCACC +
Preference number: 6 (lower is better)
Translates to: STARAIASTTARDPA*TAARRPPGSEMRPT
Trigger: GGTGGGACGCATCTCTGAACCAGGAGGACGGCGAGCTGCTGTCAAGGCCGGGTCTCTGGCGGTAGTGCTGGCGATAGCTCTGGCTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480169.1
CDS CAA 72 bp ACTTCCTCTGCCAGTCCACCCACGTACAAGACGCGCTaGGTGGTGGCCATCTTGCTCGCGCGCTTTTCCGCC +
Preference number: 6 (lower is better)
Translates to: TSSASPPTYKTR*VVAILLARFSA
Trigger: GGCGGAAAAGCGCGCGAGCAAGATGGCCACCACCAAGCGCGTCTTGTACGTGGGTGGACTGGCAGAGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485507.5
CDS CAA 72 bp CCCCAGTTTGGCTTAAAAGGGTTCCTTCCCACAGCCTaGTGTCAGGAGCTCTCAGACGCCAGTGCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: PQFGLKGFLPTA*CQELSDASAAQ
Trigger: CTGGGCTGCACTGGCGTCTGAGAGCTCCTGACACAAGGCTGTGGGAAGGAACCCTTTTAAGCCAAACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470018.5
CDS GCA 72 bp TCCTCCCTTAATCCCTGGGCCTCTACCAGTAAGCTATaGAGCCACCCCAAAGCCACCTGTGGGTTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: SSLNPWASTSKL*SHPKATCGFQG
Trigger: TCCCTGAAACCCACAGGTGGCTTTGGGGTGGCTGCATAGCTTACTGGTAGAGGCCCAGGGATTAAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482751.5
CDS CAA 90 bp GAGGGCCAGCCAGCTTTCCATATACTTCTGAGACACACTCATGATTaGTCCTCCCTTAATCCCTGGGCCTCTACCAGTAAGCTATGCAGC +
Preference number: 6 (lower is better)
Translates to: EGQPAFHILLRHTHD*SSLNPWASTSKLCS
Trigger: GCTGCATAGCTTACTGGTAGAGGCCCAGGGATTAAGGGAGGACAAATCATGAGTGTGTCTCAGAAGTATATGGAAAGCTGGCTGGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482751.5
CDS TCA 72 bp TCTGCCAGTCCACCTGCAAATAAGCCAAGGGCCTTCTaGGCCACTGATCTCCATACTCTTGCAGAAGTCCTT +
Preference number: 6 (lower is better)
Translates to: SASPPANKPRAF*ATDLHTLAEVL
Trigger: AAGGACTTCTGCAAGAGTATGGAGATCAGTGGCTCAGAAGGCCCTTGGCTTATTTGCAGGTGGACTGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497370.5
CDS CCA 72 bp CCTAGGTTTTGTGTGTTTCTAACAAAGAGCACTTCCTaGCTGATTTTAGAGCTGGTGGTGCAACAATTTGCC +
Preference number: 6 (lower is better)
Translates to: PRFCVFLTKSTS*LILELVVQQFA
Trigger: GGCAAATTGTTGCACCACCAGCTCTAAAATCAGCCAGGAAGTGCTCTTTGTTAGAAACACACAAAACCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456578.6
CDS GCA 72 bp TTCCTGGCTGATTTTAGAGCTGGTGGTGCAACAATTTaGCATCTAGTTGAAGGCACAAGAAATAATCACTAC +
Preference number: 6 (lower is better)
Translates to: FLADFRAGGATI*HLVEGTRNNHY
Trigger: GTAGTGATTATTTCTTGTGCCTTCAACTAGATGGCAAATTGTTGCACCACCAGCTCTAAAATCAGCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456578.6
CDS TCA 72 bp AGCATCAGCCTAAGGCCCAAAAACCTAACCAAATGGTaGAAAGCTTCCTTTGTAATCAGTAACAACATCACA +
Preference number: 6 (lower is better)
Translates to: SISLRPKNLTKW*KASFVISNNIT
Trigger: TGTGATGTTGTTACTGATTACAAAGGAAGCTTTTCACCATTTGGTTAGGTTTTTGGGCCTTAGGCTGATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456578.6
CDS GCA 72 bp AAATCCTGCTATTTTGCAAAATATGCAGTTACACCGTaGAATCAATTTGCACTGTGTCTGCAAATTATCCTA +
Preference number: 6 (lower is better)
Translates to: KSCYFAKYAVTP*NQFALCLQIIL
Trigger: TAGGATAATTTGCAGACACAGTGCAAATTGATTGCACGGTGTAACTGCATATTTTGCAAAATAGCAGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482751.5
ENST00000485507.5
CDS TCA 72 bp AGGACCTTTCCAGAATATCCAAATCATTTGTATCAGTaGTTTGCACCTGCCATAATTAAATTTCTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: RTFPEYPNHLYQ*FAPAIIKFLFS
Trigger: TGAGAAGAGAAATTTAATTATGGCAGGTGCAAATCACTGATACAAATGATTTGGATATTCTGGAAAGGTCCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482751.5
ENST00000485507.5