Pregenerated sensors for PPIC (Homo sapiens)
Ensembl gene IDs: ENSG00000168938Ensembl transcript IDs: ENST00000306442.5, ENST00000415659.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GCAGGTGGTTTACTAAAGTTCAAGCAAACTAAAGGGTaGCGGTTTGATTTTTATAACTTTCCTGTGATCTGG | + |
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Preference number: 3 (lower is better) Translates to: AGGLLKFKQTKG*RFDFYNFPVIW Trigger: CCAGATCACAGGAAAGTTATAAAAATCAAACCGTCACCCTTTAGTTTGCTTGAACTTTAGTAAACCACCTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR TCA 90 bp | AACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTAGGCTCTGGGACAGCTaGCGGGACTGCCGGCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: NTHTHTHTHTPLPKHILVRLWDS*RDCRPA Trigger: AGCCGGCCGGCAGTCCCGTCAGCTGTCCCAGAGCCT...AACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CCA 90 bp | AAAATAGCACCACTTGAGGAAGGGGATATATTTAAGTTCAAAGTCCCTAAGCAGGCCCATGGTGAGCGGTaGCAGCGGCGCTACCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KIAPLEEGDIFKFKVPKQAHGER*QRRYRH Trigger: GTGCCGGTAGCGCCGCTGCCACCGCTCACCATGGGC...CTGCTTAGGGACTTTGAACTTAAATATATCCCCTTCCTCAAGTGGTGCTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTTCATCAAAGAAGACCTTaGCCGTCACCGAGGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHPCQSISLFHQRRP*PSPRGL Trigger: GAGGCCCCTCGGTGACGGCCAAGGTCTTCTTTGATG...AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR TCA 90 bp | ACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTACACTAGTCAAAGACCCGGGCCCATGGTaGGCGGTGGCAGCGGCGCTA | + |
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Preference number: 4 (lower is better) Translates to: TLLSERNPYDISQITLVKDPGPW*AVAAAL Trigger: TAGCGCCGCTGCCACCGCTCACCATGGGCCCGGGTC...TTTGACTAGTGTAATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR GCA 90 bp | AACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTGTGAGTGGACGGTCATaGCCATCAGTTGCTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NTHTHTHTHTPLPKHILVVSGRS*PSVAWS Trigger: GCTCCAAGCAACTGATGGGCATGACCGTCCACTCAC...AACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CCA 90 bp | CAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCTGCCCATCAGTTGCTTaGAGCTCTATGGAGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: QHNTHTHTHTHTPLPKHICPSVA*SSMECT Trigger: GGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCA...GATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CCA 90 bp | ACAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCGAGCAGTTGGTGAGTaGACGGTCATGCCCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: TTQHTHTHTHTHTPAKAYRAVGE*TVMPIS Trigger: ACTGATGGGCATGACCGTCCACTCACCAACTGCTCG...ATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR GCA 90 bp | ACAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCAAACACCACATGTTTaGCGTCCAACCAGGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TTQHTHTHTHTHTPAKAYQTPHV*RPTRWA Trigger: AGCCCACCTGGTTGGACGGCAAACATGTGGTGTTTG...ATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR GCA 90 bp | CAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCGTCATGCCCATCAGTTaGTTGGAGCTCTATGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: QHNTHTHTHTHTPLPKHIVMPIS*LELYGV Trigger: CACTCCATAGAGCTCCAAGCAACTGATGGGCATGAC...GATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTTATGTCTCACCATAGATaGTCACACCCCCAGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHPCQSISLFMSHHR*SHPQCH Trigger: ATGGCACTGGGGGTGTGAGCATCTATGGTGAGACAT...AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CCA 90 bp | ACAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATTTGCTTGGAGCTCTATaGAGTGCACCACTGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: TTQHTHTHTHTHTPAKAYLLGAL*SAPLSS Trigger: GGATGACAGTGGTGCACTCCATAGAGCTCCAAGCAA...ATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR TCA 90 bp | AAAATAGCACCACTTGAGGAAGGGGATATATTTAAGTTCAAAGTCCCTAAGCAGCAGCGTTGGCCATGCTaGCCCACCCAATGCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: KIAPLEEGDIFKFKVPKQQRWPC*PTQCHS Trigger: ACTATGGCATTGGGTGGGTCAGCATGGCCAACGCTG...CTGCTTAGGGACTTTGAACTTAAATATATCCCCTTCCTCAAGTGGTGCTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTTACACACACACACCCCTaGCAAAGCATATCCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHPCQSISLFTHTHP*QSISLF Trigger: AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGT...AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR GCA 90 bp | ACAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCATATCCTTGTTTTCTaGCAGTTGTGTCACCAATCA | + |
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Preference number: 4 (lower is better) Translates to: TTQHTHTHTHTHTPAKAYHILVF*QLCHQS Trigger: TGATTGGTGACACAACTGGCAGAAAACAAGGATATG...ATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTTAAGTCCCTAAGCAGGTaGTTTACTAAAGTTCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHPCQSISLFKSLSR*FTKVQA Trigger: TGCTTGAACTTTAGTAAACCACCTGCTTAGGGACTT...AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR TCA 90 bp | GAACAGCAAAGCACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTTGCCATCTCCAGTGGTaGTGTCACCTCCTTGAATCA | + |
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Preference number: 4 (lower is better) Translates to: EQQSTLLSERNPYDISQICHLQW*CHLLES Trigger: TGATTCAAGGAGGTGACATCACCACTGGAGATGGCA...AATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGTGCTTTGCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR GCA 90 bp | GAACAGCAAAGCACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTTGGAGCTCTATGGAGTaGACCACTGTCATCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: EQQSTLLSERNPYDISQIWSSME*TTVIPS Trigger: TGATGGGATGACAGTGGTGCACTCCATAGAGCTCCA...AATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGTGCTTTGCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR GCA 90 bp | AAAATAGCACCACTTGAGGAAGGGGATATATTTAAGTTCAAAGTCCCTAAGCAGGGCCAATCACAATTCTaGCAACATCTTTGTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: KIAPLEEGDIFKFKVPKQGQSQF*QHLCLQ Trigger: TTGGAGACAAAGATGTTGGCAGAATTGTGATTGGCC...CTGCTTAGGGACTTTGAACTTAAATATATCCCCTTCCTCAAGTGGTGCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR TCA 90 bp | GAACAGCAAAGCACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTTCCTTGATGACACGATaGAACTTGCTTCCTTTATAT | + |
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Preference number: 4 (lower is better) Translates to: EQQSTLLSERNPYDISQISLMTR*NLLPLY Trigger: ATATAAAGGAAGCAAGTTTCATCGTGTCATCAAGGA...AATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGTGCTTTGCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | AACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTACCGAGGGGCCTCGCTaGCGGAAGCCCTCGGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: NTHTHTHTHTPLPKHILVTEGPR*RKPSAP Trigger: GGGGGCCGAGGGCTTCCGCAAGCGAGGCCCCTCGGT...AACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | CAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCACATCAAAGAAGACCTaGGCCGTCACCGAGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: QHNTHTHTHTHTPLPKHITSKKT*AVTEGP Trigger: AGGCCCCTCGGTGACGGCCAAGGTCTTCTTTGATGT...GATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS GCA 90 bp | GTTGATGATCGAGCAGTTGGTGAGTGGACGGTCATGCCCATCAGTTaGTTGGAGCTCTATGGAGTGCACCACTGTCATCCCATCAATGAC | + |
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Preference number: 5 (lower is better) Translates to: VDDRAVGEWTVMPIS*LELYGVHHCHPIND Trigger: GTCATTGATGGGATGACAGTGGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGCTCGATCATCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS GCA 90 bp | ATCTTGCCACTGTTGATGATCGAGCAGTTGGTGAGTGGACGGTCATaGCCATCAGTTGCTTGGAGCTCTATGGAGTGCACCACTGTCATC | + |
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Preference number: 5 (lower is better) Translates to: ILPLLMIEQLVSGRS*PSVAWSSMECTTVI Trigger: GATGACAGTGGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGCTCGATCATCAACAGTGGCAAGAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CCA 90 bp | ATGATCGAGCAGTTGGTGAGTGGACGGTCATGCCCATCAGTTGCTTaGAGCTCTATGGAGTGCACCACTGTCATCCCATCAATGACTTTT | + |
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Preference number: 5 (lower is better) Translates to: MIEQLVSGRSCPSVA*SSMECTTVIPSMTF Trigger: AAAAGTCATTGATGGGATGACAGTGGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGCTCGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | GAACAGCAAAGCACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTGTGTCAGGCCCAGCGTaGGCCATGCTGACCCACCCA | + |
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Preference number: 5 (lower is better) Translates to: EQQSTLLSERNPYDISQIVSGPA*AMLTHP Trigger: TGGGTGGGTCAGCATGGCCAACGCTGGGCCTGACAC...AATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGTGCTTTGCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATATGCCCATCAGTTGCTaGGAGCTCTATGGAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: TTQHTHTHTHTHTPAKAYMPISC*ELYGVH Trigger: GTGCACTCCATAGAGCTCCAAGCAACTGATGGGCAT...ATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTTGGTCATGCCCATCAGTaGCTTGGAGCTCTATGGAGT | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHPCQSISLFGHAHQ*LGALWS Trigger: ACTCCATAGAGCTCCAAGCAACTGATGGGCATGACC...AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACAACACAACACACACACACACACACACACACACACACCCCTGCCAAAGCATATTTGATGATCGAGCAGTaGGTGAGTGGACGGTCATGC | + |
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Preference number: 5 (lower is better) Translates to: TTQHTHTHTHTHTPAKAYLMIEQ*VSGRSC Trigger: GCATGACCGTCCACTCACCAACTGCTCGATCATCAA...ATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS GCA 90 bp | AAAGACAACACAACACACACACACACACACACACACACACACCCCTaGCAAAGCATATCCTTGTTTTCTGCCAGTTGTGTCACCAATCAG | + |
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Preference number: 5 (lower is better) Translates to: KDNTTHTHTHTHTHP*QSISLFSASCVTNQ Trigger: CTGATTGGTGACACAACTGGCAGAAAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTTTGCCAAAGCATATCCTaGTTTTCTGCCAGTTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHPCQSISLFCQSIS*FSASCV Trigger: GACACAACTGGCAGAAAACAAGGATATGCTTTGGCA...AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTTGGTGATGTCACCTCCTaGAATCATGAAATCCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHPCQSISLFGDVTS*NHEILD Trigger: ATCAAGGATTTCATGATTCAAGGAGGTGACATCACC...AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CCA 90 bp | ACTGGGTTCATATACTGGCTTAACCTTAGATTTCGGTTTGGTAAATaGGAAAGGAAAAATGCAAAGACGTTACCCCCAGTGCCATCTCCA | + |
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Preference number: 5 (lower is better) Translates to: TGFIYWLNLRFRFGK*ERKNAKTLPPVPSP Trigger: TGGAGATGGCACTGGGGGTAACGTCTTTGCATTTTTCCTTTCCCATTTACCAAACCGAAATCTAAGGTTAAGCCAGTATATGAACCCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000415659.2 |
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| CDS-3UTR CAA 90 bp | AAAATAGCACCACTTGAGGAAGGGGATATATTTAAGTTCAAAGTCCCTAAGCAGTCCAACCAGGTGGGCTaGGTCAAGGTGATAAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: KIAPLEEGDIFKFKVPKQSNQVG*VKVIKN Trigger: GTTCTTTATCACCTTGACCAAGCCCACCTGGTTGGA...CTGCTTAGGGACTTTGAACTTAAATATATCCCCTTCCTCAAGTGGTGCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTTGTTTCTAAAGGGTGACGGTTaGATTTTTATAACTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHPCQSISLFLKGDG*IFITFL Trigger: CAGGAAAGTTATAAAAATCAAACCGTCACCCTTTAG...AAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | GAACAGCAAAGCACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTGTTTTCACGTCTATCTaGCCACTGTTGATGATCGAG | + |
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Preference number: 5 (lower is better) Translates to: EQQSTLLSERNPYDISQIVFTSI*PLLMIE Trigger: CTCGATCATCAACAGTGGCAAGATAGACGTGAAAAC...AATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGTGCTTTGCTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | AAAATAGCACCACTTGAGGAAGGGGATATATTTAAGTTCAAAGTCCCTAAGCAGATTCTGCCAACATCTTaGTCTCCAATCCTCACATCA | + |
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Preference number: 5 (lower is better) Translates to: KIAPLEEGDIFKFKVPKQILPTS*SPILTS Trigger: TGATGTGAGGATTGGAGACAAAGATGTTGGCAGAAT...CTGCTTAGGGACTTTGAACTTAAATATATCCCCTTCCTCAAGTGGTGCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTACACTAGTCAAATCTATCTTGCCACTGTaGATGATCGAGCAGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TLLSERNPYDISQITLVKSILPL*MIEQLV Trigger: CACCAACTGCTCGATCATCAACAGTGGCAAGATAGA...TTTGACTAGTGTAATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTACACTAGTCAAACTTGTTTTCTGCCAGTaGTGTCACCAATCAGCGATC | + |
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Preference number: 5 (lower is better) Translates to: TLLSERNPYDISQITLVKLVFCQ*CHQSAI Trigger: GATCGCTGATTGGTGACACAACTGGCAGAAAACAAG...TTTGACTAGTGTAATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTACACTAGTCAAACAGCAAAGCACCCTTTaGTCAGAAAGAAATCCCTAT | + |
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Preference number: 5 (lower is better) Translates to: TLLSERNPYDISQITLVKQQSTL*SERNPY Trigger: ATAGGGATTTCTTTCTGACAAAAGGGTGCTTTGCTG...TTTGACTAGTGTAATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS-3UTR CAA 90 bp | ACCCTTTTGTCAGAAAGAAATCCCTATGACATATCTCAGATTACACTAGTCAAAAAATTTTCCACTGTCTaGGGCACAACTTTTCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: TLLSERNPYDISQITLVKKFSTV*GTTFPK Trigger: CTTTGGAAAAGTTGTGCCCAAGACAGTGGAAAATTT...TTTGACTAGTGTAATCTGAGATATGTCATAGGGATTTCTTTCTGACAAAAGGGT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS GCA 72 bp | CGAGCAGTTGGTGAGTGGACGGTCATGCCCATCAGTTaGTTGGAGCTCTATGGAGTGCACCACTGTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: RAVGEWTVMPIS*LELYGVHHCHP Trigger: GGGATGACAGTGGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 72 bp | GCAGTTGGTGAGTGGACGGTCATGCCCATCAGTTGCTaGGAGCTCTATGGAGTGCACCACTGTCATCCCATC | + |
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Preference number: 6 (lower is better) Translates to: AVGEWTVMPISC*ELYGVHHCHPI Trigger: GATGGGATGACAGTGGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS GCA 72 bp | CTGTTGATGATCGAGCAGTTGGTGAGTGGACGGTCATaGCCATCAGTTGCTTGGAGCTCTATGGAGTGCACC | + |
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Preference number: 6 (lower is better) Translates to: LLMIEQLVSGRS*PSVAWSSMECT Trigger: GGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGCTCGATCATCAACAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CCA 72 bp | CAGTTGGTGAGTGGACGGTCATGCCCATCAGTTGCTTaGAGCTCTATGGAGTGCACCACTGTCATCCCATCA | + |
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Preference number: 6 (lower is better) Translates to: QLVSGRSCPSVA*SSMECTTVIPS Trigger: TGATGGGATGACAGTGGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS TCA 72 bp | GGACGCCTCCCTCATACCTGTCGAGATGCTGCTAGATaGGTCCCCAAAACTCCATCCTTCTCAAAGAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GRLPHTCRDAAR*VPKTPSFSKRY Trigger: GTACCTCTTTGAGAAGGATGGAGTTTTGGGGACTCATCTAGCAGCATCTCGACAGGTATGAGGGAGGCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415659.2 |
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| CDS CAA 90 bp | GATGATCGAGCAGTTGGTGAGTGGACGGTCATGCCCATCAGTTGCTaGGAGCTCTATGGAGTGCACCACTGTCATCCCATCAATGACTTT | + |
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Preference number: 6 (lower is better) Translates to: DDRAVGEWTVMPISC*ELYGVHHCHPINDF Trigger: AAAGTCATTGATGGGATGACAGTGGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGCTCGATCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 72 bp | TTCACGTCTATCTTGCCACTGTTGATGATCGAGCAGTaGGTGAGTGGACGGTCATGCCCATCAGTTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: FTSILPLLMIEQ*VSGRSCPSVAW Trigger: CCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGCTCGATCATCAACAGTGGCAAGATAGACGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 90 bp | AAAGGCGTTTTCACGTCTATCTTGCCACTGTTGATGATCGAGCAGTaGGTGAGTGGACGGTCATGCCCATCAGTTGCTTGGAGCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: KGVFTSILPLLMIEQ*VSGRSCPSVAWSSM Trigger: CATAGAGCTCCAAGCAACTGATGGGCATGACCGTCCACTCACCAACTGCTCGATCATCAACAGTGGCAAGATAGACGTGAAAACGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 90 bp | GCGATCTCAACCACAAAAGGCGTTTTCACGTCTATCTTGCCACTGTaGATGATCGAGCAGTTGGTGAGTGGACGGTCATGCCCATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: AISTTKGVFTSILPL*MIEQLVSGRSCPSV Trigger: AACTGATGGGCATGACCGTCCACTCACCAACTGCTCGATCATCAACAGTGGCAAGATAGACGTGAAAACGCCTTTTGTGGTTGAGATCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 90 bp | CACCAATCAGCGATCTCAACCACAAAAGGCGTTTTCACGTCTATCTaGCCACTGTTGATGATCGAGCAGTTGGTGAGTGGACGGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: HQSAISTTKGVFTSI*PLLMIEQLVSGRSC Trigger: GCATGACCGTCCACTCACCAACTGCTCGATCATCAACAGTGGCAAGATAGACGTGAAAACGCCTTTTGTGGTTGAGATCGCTGATTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 72 bp | ACCACAAAAGGCGTTTTCACGTCTATCTTGCCACTGTaGATGATCGAGCAGTTGGTGAGTGGACGGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: TTKGVFTSILPL*MIEQLVSGRSC Trigger: GCATGACCGTCCACTCACCAACTGCTCGATCATCAACAGTGGCAAGATAGACGTGAAAACGCCTTTTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 90 bp | CACACACACACACACACACACACACACCCCTGCCAAAGCATATCCTaGTTTTCTGCCAGTTGTGTCACCAATCAGCGATCTCAACCACAA | + |
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Preference number: 6 (lower is better) Translates to: HTHTHTHTHPCQSIS*FSASCVTNQRSQPQ Trigger: TTGTGGTTGAGATCGCTGATTGGTGACACAACTGGCAGAAAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS GCA 72 bp | ACACACACACCCCTGCCAAAGCATATCCTTGTTTTCTaGCAGTTGTGTCACCAATCAGCGATCTCAACCACA | + |
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Preference number: 6 (lower is better) Translates to: THTPLPKHILVF*QLCHQSAISTT Trigger: TGTGGTTGAGATCGCTGATTGGTGACACAACTGGCAGAAAACAAGGATATGCTTTGGCAGGGGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS GCA 72 bp | ACAACACACACACACACACACACACACACACACCCCTaGCAAAGCATATCCTTGTTTTCTGCCAGTTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TTHTHTHTHTHP*QSISLFSASCV Trigger: GACACAACTGGCAGAAAACAAGGATATGCTTTGGCAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 72 bp | GCGATCTCAACCACAAAAGGCGTTTTCACGTCTATCTaGCCACTGTTGATGATCGAGCAGTTGGTGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: AISTTKGVFTSI*PLLMIEQLVSG Trigger: TCCACTCACCAACTGCTCGATCATCAACAGTGGCAAGATAGACGTGAAAACGCCTTTTGTGGTTGAGATCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306442.5 |
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| CDS CAA 90 bp | GGCACAACTTTTCCAAAGAGGCCAATCACAATTCTGCCAACATCTTaGTCTCCAATCCTCACATCAAAGAAGACCTTGGCCGTCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: GTTFPKRPITILPTS*SPILTSKKTLAVTE Trigger: CTCGGTGACGGCCAAGGTCTTCTTTGATGTGAGGATTGGAGACAAAGATGTTGGCAGAATTGTGATTGGCCTCTTTGGAAAAGTTGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306442.5 ENST00000415659.2 |
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| CDS CAA 72 bp | TTTCCAAAGAGGCCAATCACAATTCTGCCAACATCTTaGTCTCCAATCCTCACATCAAAGAAGACCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: FPKRPITILPTS*SPILTSKKTLA Trigger: GGCCAAGGTCTTCTTTGATGTGAGGATTGGAGACAAAGATGTTGGCAGAATTGTGATTGGCCTCTTTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306442.5 ENST00000415659.2 |
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