RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPFIBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166387

Ensembl transcript IDs: ENST00000299492.9, ENST00000524495.5, ENST00000524548.5, ENST00000525597.5, ENST00000526046.1, ENST00000526873.5, ENST00000527790.5, ENST00000528883.5, ENST00000528929.1, ENST00000528947.5, ENST00000529021.1, ENST00000529321.1, ENST00000529575.5, ENST00000529664.1, ENST00000530081.1, ENST00000530181.5, ENST00000530189.1, ENST00000530582.5, ENST00000532112.1, ENST00000532172.1, ENST00000532381.1, ENST00000532416.1, ENST00000532926.5, ENST00000533792.5, ENST00000534409.5, ENST00000534552.1, ENST00000650027.1, ENST00000684123.1, ENST00000684215.1

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCCTAAGGCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTaGCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACC +
Preference number: 1 (lower is better)
Translates to: GPKALELFPQLKCRG*LRAEPRGSVHGLWT
Trigger: GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTTAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CCA 90 bp GTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCCCAAAGCCTaGCCCCTTAGAGATGCAGCTCCAGATCCTGGCCACCCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: VSFLLSPPLAMVPKA*PLRDAAPDPGHPQG
Trigger: ACCCTGAGGGTGGCCAGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTaGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGC +
Preference number: 1 (lower is better)
Translates to: PPSGFKETGPGVHNC*NILCESCTRAGVRC
Trigger: GCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CCA 90 bp AGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTaGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATG +
Preference number: 1 (lower is better)
Translates to: RGCLRAEPRGSVHGL*TCIEVHVFPLVLKM
Trigger: CATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CCA 90 bp GAGATGCAGCTCCAGATCCTGGCCACCCTCAGGGTTCAAAGAGACTaGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATG +
Preference number: 1 (lower is better)
Translates to: EMQLQILATLRVQRD*PRGTQLLEYSLRVM
Trigger: CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGCCAGGATCTGGAGCTGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR TCA 90 bp CAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTaGTCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGC +
Preference number: 1 (lower is better)
Translates to: QFHCHCGRSPCCSSL*SQPRLWSTGLRHLS
Trigger: GCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR GCA 90 bp ACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATaGACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACA +
Preference number: 1 (lower is better)
Translates to: TGPGVHNCWNILCES*TRAGVRCSYMVTHT
Trigger: TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR GCA 90 bp TGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATC +
Preference number: 1 (lower is better)
Translates to: CLRAEPRGSVHGLWT*IEVHVFPLVLKMNI
Trigger: GATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR GCA 90 bp TTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTaGGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTG +
Preference number: 1 (lower is better)
Translates to: FKETGPGVHNCWNIL*ESCTRAGVRCSYMV
Trigger: CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CCA 90 bp GAGACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTaGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACT +
Preference number: 1 (lower is better)
Translates to: ETTSEVRHNTIPLSL*QKSLLLIPLISAKT
Trigger: AGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR TCA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGAGTGTAGGGGGTGCCTaGGAGCTGAGCCTCGTGGGA +
Preference number: 2 (lower is better)
Translates to: LIPLISAKTVVHGPKALESVGGA*ELSLVG
Trigger: TCCCACGAGGCTCAGCTCTCAGGCACCCCCTACACT...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CAA 90 bp CTGGCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATaGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: LATLRVQRDWPRGTQ*LEYSLRVMHTCGGE
Trigger: CTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR GCA 90 bp GCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGATTCTCTGCGAGTCATaGACACGTGCGGGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: AEVPVAHPFDLSQDCGPRILCES*TRAGVR
Trigger: CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT...CCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR GCA 90 bp GCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGCTGAAGTGTAGGGGGTaGCTGAGAGCTGAGCCTCGT +
Preference number: 2 (lower is better)
Translates to: AEVPVAHPFDLSQDCGPRLKCRG*LRAEPR
Trigger: ACGAGGCTCAGCTCTCAGGCACCCCCTACACTTCAG...CCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR CCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCTCGTGGGAGTGTCCATaGTCTCTGGACCTGCATCGA +
Preference number: 2 (lower is better)
Translates to: PLISAKTVVHGPKALELFSWECP*SLDLHR
Trigger: TCGATGCAGGTCCAGAGACCATGGACACTCCCACGA...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR TCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATCACACAGTGTTACTGTaGGCTCTCAGGGTGCACAGA +
Preference number: 2 (lower is better)
Translates to: CWNILCESCTRAGVRCSYHTVLL*ALRVHR
Trigger: TCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTG...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
3UTR CAA 90 bp ACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCTTaGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAG +
Preference number: 2 (lower is better)
Translates to: TIPLSLWQKSLLLIP*ISAKTVVHGPKALE
Trigger: CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CAA 90 bp GTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTaGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCT +
Preference number: 2 (lower is better)
Translates to: VRHNTIPLSLWQKSL*LIPLISAKTVVHGP
Trigger: AGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR TCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATCACACAGTGTTACTGTaGGCTCTCAGGGTGCACAGA +
Preference number: 2 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYHTVLL*ALRVHR
Trigger: TCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTG...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR GCA 90 bp AAGGCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTGCCTGAGAGCTGAGTGCTGGAATATTCTCTaGGAGTCATGCACACGTGCG +
Preference number: 2 (lower is better)
Translates to: KALELFPQLKCRGCLRAECWNIL*ESCTRA
Trigger: CGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA...CTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR CCA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCAGGGTTCAAAGAGACTaGCCCAGGGGTACACAATTG +
Preference number: 2 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVRVQRD*PRGTQL
Trigger: CAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCT...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR CCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCAGTGTCCATGGTCTCTaGACCTGCATCGAAGTTCAT +
Preference number: 2 (lower is better)
Translates to: PLISAKTVVHGPKALELFSVHGL*TCIEVH
Trigger: ATGAACTTCGATGCAGGTCCAGAGACCATGGACACT...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR GCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATCGTGCGGGGGTGAGGTaGAGTTATATGGTGACACAC +
Preference number: 2 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHRAGVR*SYMVTH
Trigger: GTGTGTCACCATATAACTGCACCTCACCCCCGCACG...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR GCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTT +
Preference number: 2 (lower is better)
Translates to: PLISAKTVVHGPKALELFHGLWT*IEVHVF
Trigger: AAACACATGAACTTCGATGCAGGTCCAGAGACCATG...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR TCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGGGTGCAGTTATATGGTaGCACACACAGTGTTACTGT +
Preference number: 2 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMGAVIW*HTQCYC
Trigger: ACAGTAACACTGTGTGTGTCACCATATAACTGCACC...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CAA 90 bp AAGAAAGAAGAGACCACCTCTGAAGTAAGGCACAACACAATTCCATaGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCA +
Preference number: 2 (lower is better)
Translates to: KKEETTSEVRHNTIP*SLWQKSLLLIPLIS
Trigger: TGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGTCTCTTCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR GCA 90 bp CATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCAGGGGTACACAATTaGTGGAATATTCTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: HVKVSLSVFPPESTFGNGPGVHN*WNILCE
Trigger: CTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGG...ACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR GCA 72 bp ACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTaGGAGTCATGCACACGTGCGGGGGTGAGGTGCAGT +
Preference number: 3 (lower is better)
Translates to: TGPGVHNCWNIL*ESCTRAGVRCS
Trigger: ACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR GCA 72 bp GCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTaGCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGT +
Preference number: 3 (lower is better)
Translates to: ALELFPQLKCRG*LRAEPRGSVHG
Trigger: ACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR-3UTR CAA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCTCCTGAGTCCACCTTaGGCAATGGTCCCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVLLSPP*AMVPKA
Trigger: GGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAG...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR GCA 72 bp GCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTTCCACTGGTGCTGAAG +
Preference number: 3 (lower is better)
Translates to: AEPRGSVHGLWT*IEVHVFPLVLK
Trigger: CTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGGCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CCA 72 bp GGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTaGAATATTCTCTGCGAGTCATGCACACGTGCGGGG +
Preference number: 3 (lower is better)
Translates to: GFKETGPGVHNC*NILCESCTRAG
Trigger: CCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CCA 72 bp CTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTaGACCTGCATCGAAGTTCATGTGTTTCCACTGGTG +
Preference number: 3 (lower is better)
Translates to: LRAEPRGSVHGL*TCIEVHVFPLV
Trigger: CACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR CCA 72 bp CTCCAGATCCTGGCCACCCTCAGGGTTCAAAGAGACTaGCCCAGGGGTACACAATTGCTGGAATATTCTCTG +
Preference number: 3 (lower is better)
Translates to: LQILATLRVQRD*PRGTQLLEYSL
Trigger: CAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGCCAGGATCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR GCA 72 bp GGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATaGACACGTGCGGGGGTGAGGTGCAGTTATATGGTG +
Preference number: 3 (lower is better)
Translates to: GVHNCWNILCES*TRAGVRCSYMV
Trigger: CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
3UTR CCA 72 bp TCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTaGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCA +
Preference number: 3 (lower is better)
Translates to: SEVRHNTIPLSL*QKSLLLIPLIS
Trigger: TGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
3UTR TCA 72 bp ATATTGCTTTTATTACAAGAAAGAAGAGACCACCTCTaGAGTAAGGCACAACACAATTCCATTGTCACTGTG +
Preference number: 3 (lower is better)
Translates to: ILLLLQERRDHL*SKAQHNSIVTV
Trigger: CACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGTCTCTTCTTTCTTGTAATAAAAGCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCGCAGGCTGCTCCCCGTaGCGTCAGGCTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTAGCSP*RQAGRW
Trigger: CCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGC...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACGGGCATCAAGGGGGCTaGGGCCCCGGTAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHGHQGG*GPGSHC
Trigger: ACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCC...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTGGGGTGCCTGAGAGCTaGGCCTCGTGGGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPGVPES*ASWECP
Trigger: TGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCC...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCTCAGCCTCAGCAGGCTaGTCCCCGTGGCGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGSASAG*SPWRQA
Trigger: AGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTTCAGCCTCAGCAGGCTaGTCCCCGTGGCGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPSASAG*SPWRQA
Trigger: AGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCATCTTGGCCCTGCGGTTaGCCGGAGCCCACCTCGTCG +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKASWPCG*PEPTSS
Trigger: CGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGA...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCGGGCATCAAGGGGGCTaGGGCCCCGGTAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFGHQGG*GPGSHC
Trigger: ACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCC...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAGGGCATCAAGGGGGCTaGGGCCCCGGTAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLGHQGG*GPGSHC
Trigger: ACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCC...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACATCTTGGCCCTGCGGTTaGCCGGAGCCCACCTCGTCG +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTSWPCG*PEPTSS
Trigger: CGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGA...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACAAGAGAGTCTTGGCCCTaGGGTTGCCCGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTRESWP*GCPEPT
Trigger: GGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCT...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCATCAGCTGGCCGCCGGTaGAGGCAGTGGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKASAGRR*RQWGLN
Trigger: GTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGA...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTCGCTCTGTGCTCCACTaGGCAAAGGGGGCATTGGCG +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPRSVLH*AKGALA
Trigger: CGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCG...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCTCGTGGGAGTGTCCATaGTCTCTGGACCTGCATCGA +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTSWECP*SLDLHR
Trigger: TCGATGCAGGTCCAGAGACCATGGACACTCCCACGA...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCGCAAAGATCACATACTaGGCCAGGCCAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTAKITY*ARPKSS
Trigger: GGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGC...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCATGGTCAGGTGGCGCCTaGGGAGCGTCTTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKAWSGGA*GASFVG
Trigger: CCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCA...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACAGGGCATCAAGGGGGCTaGGGCCCCGGTAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: ETGPGVHNCWNILCESCTGHQGG*GPGSHC
Trigger: ACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCC...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGGGGGTGCCTGAGAGCTaGGCCTCGTGGGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVGVPES*ASWECP
Trigger: TGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCC...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAGGGGTGCCTGAGAGCTaGGCCTCGTGGGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLGVPES*ASWECP
Trigger: TGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCC...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCAAGTGTAGGGGGTGCCTaGGAGCTGAGCCTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKASVGGA*ELSLVG
Trigger: TCCCACGAGGCTCAGCTCTCAGGCACCCCCTACACT...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCCTCACTGTGGAGAGCTaGTGTCCGGGAGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGLTVES*CPGELA
Trigger: AGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAG...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTTCTTGGCCCTGCGGTTaGCCGGAGCCCACCTCGTCG +
Preference number: 4 (lower is better)
Translates to: PPSGFKETGPGVHNCWNISWPCG*PEPTSS
Trigger: CGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGA...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCAGAGAGTCTTGGCCCTaGGGTTGCCCGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSRESWP*GCPEPT
Trigger: GGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCT...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCAGAGAGTCTTGGCCCTaGGGTTGCCCGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVRESWP*GCPEPT
Trigger: GGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCT...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGTCAGCTGGCCGCCGGTaGAGGCAGTGGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVSAGRR*RQWGLN
Trigger: GTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGA...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTCAGCTGGCCGCCGGTaGAGGCAGTGGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRSAGRR*RQWGLN
Trigger: GTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGA...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCCCGTGGCGTCAGGCTaGCAGATGGTGGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LIPLISAKTVVHGPKALEPVASG*QMVGGD
Trigger: ATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGG...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGCAGGCTGCTCCCCGTaGCGTCAGGCTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYAGCSP*RQAGRW
Trigger: CCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGC...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCAGGTCCTAGAGAGTCTTaGCCCTGCGGTTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKAGPRES*PCGCPE
Trigger: CTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACC...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGGTCCTAGAGAGTCTTaGCCCTGCGGTTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTGPRES*PCGCPE
Trigger: CTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACC...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACCGCTCTGTGCTCCACTaGGCAAAGGGGGCATTGGCG +
Preference number: 4 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNRSVLH*AKGALA
Trigger: CGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCG...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCGGACTTTGGCTGTGGTaGTCAGTGGTGTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTGLWLW*SVVCKL
Trigger: CAGCTTACACACCACTGACCACCACAGCCAAAGTCC...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCGTCACTGGGCTCCATTaGGCAAATGTAGTCCGTCGA +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTVTGLH*ANVVRR
Trigger: TCGACGGACTACATTTGCCCAATGGAGCCCAGTGAC...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACGGTGTCAGAGGAGACTaGGGACCTGATTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHGVRGD*GPDSVP
Trigger: GGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACC...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCTGGTCAGGTGGCGCCTaGGGAGCGTCTTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFWSGGA*GASFVG
Trigger: CCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCA...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTTGGTCAGGTGGCGCCTaGGGAGCGTCTTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVWSGGA*GASFVG
Trigger: CCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCA...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCGGGCATCAAGGGGGCTaGGGCCCCGGTAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPGHQGG*GPGSHC
Trigger: ACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCC...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR TCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGTGTAGGGGGTGCCTaGGAGCTGAGCCTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVSVGGA*ELSLVG
Trigger: TCCCACGAGGCTCAGCTCTCAGGCACCCCCTACACT...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTAGTGTAGGGGGTGCCTaGGAGCTGAGCCTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVSVGGA*ELSLVG
Trigger: TCCCACGAGGCTCAGCTCTCAGGCACCCCCTACACT...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGCTGGCTCAGGAGGGCTaGTCTCTCCTGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AQGYTIAGIFSASHAHVRLAQEG*SLLRKL
Trigger: GAGCTTCCTCAGGAGAGAGCAGCCCTCCTGAGCCAG...CCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR GCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCAAGGGCCACCTGTTCTTaGAGCTGGGCGACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKARATCS*SWATSA
Trigger: GGCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCT...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGCTCACTGTGGAGAGCTaGTGTCCGGGAGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AEVPVAHPFDLSQDCGPRLTVES*CPGELA
Trigger: AGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAG...CCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATTCAGCCTCAGCAGGCTaGTCCCCGTGGCGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYSASAG*SPWRQA
Trigger: AGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTTCAGCTGGCCGCCGGTaGAGGCAGTGGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTSAGRR*RQWGLN
Trigger: GTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGA...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCCTGAAGTGTAGGGGGTaGCTGAGAGCTGAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGLKCRG*LRAEPR
Trigger: ACGAGGCTCAGCTCTCAGGCACCCCCTACACTTCAG...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTCAGGGCAGGTCACATaGAGGCTCTCCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLSGQVT*RLSRWP
Trigger: GGGCCACCTGGAGAGCCTGCATGTGACCTGCCCTGA...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACGCTGTCCGGGAGAGCTaGCTGTGCAGACGCTCAATT +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHAVRES*LCRRSI
Trigger: AATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGC...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCAACACCGGGAAGGGCTaGTTCCCATCCATACACTTA +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTNTGKG*FPSIHL
Trigger: TAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTT...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTGTGGCAGCCTCTCCATTaGGCGTGGCTCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LWQWSPKPGPLEMQLQILWQPLH*AWLLKA
Trigger: AGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCA...CAGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCTGGTGGGAGGAGATTTaGCAGCCTCTCCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGWWEEI*QPLHWA
Trigger: CGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCA...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTGCAGGCTGGCAGATGGTaGGAGGAGATTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LWQWSPKPGPLEMQLQILQAGRW*EEIWQP
Trigger: AGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTG...CAGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCCGTGGCGTCAGGCTaGCAGATGGTGGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFPVASG*QMVGGD
Trigger: ATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGG...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTCCCGTGGCGTCAGGCTaGCAGATGGTGGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVPVASG*QMVGGD
Trigger: ATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGG...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGGCAGGCTGCTCCCCGTaGCGTCAGGCTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMAGCSP*RQAGRW
Trigger: CCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGC...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGCAGGCTGCTCCCCGTaGCGTCAGGCTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCAGCSP*RQAGRW
Trigger: CCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGC...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCGCTCTGTGCTCCACTaGGCAAAGGGGGCATTGGCG +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVRSVLH*AKGALA
Trigger: CGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCG...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCTCCTTGGCCGGACTTTaGCTGTGGTGGTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGSLAGL*LWWSVV
Trigger: CACCACTGACCACCACAGCCAAAGTCCGGCCAAGGA...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTTCCTTGGCCGGACTTTaGCTGTGGTGGTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPSLAGL*LWWSVV
Trigger: CACCACTGACCACCACAGCCAAAGTCCGGCCAAGGA...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCAGTCCACCTTTGGCAATaGTCCCCAAAGCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKAVHLWQ*SPKPGP
Trigger: GGGGCCAGGCTTTGGGGACCATTGCCAAAGGTGGAC...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACGTCCACCTTTGGCAATaGTCCCCAAAGCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNVHLWQ*SPKPGP
Trigger: GGGGCCAGGCTTTGGGGACCATTGCCAAAGGTGGAC...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCAGGTGTCAGAGGAGACTaGGGACCTGATTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKAGVRGD*GPDSVP
Trigger: GGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACC...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATTGGTCAGGTGGCGCCTaGGGAGCGTCTTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYWSGGA*GASFVG
Trigger: CCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCA...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACAGCCATGACTCCTTTTaGCTGCCTGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNSHDSF*LPGLLL
Trigger: GAGGAGGAGGCCAGGCAGGCAAAAGGAGTCATGGCT...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR GCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCAGGGCCACCTGTTCTTaGAGCTGGGCGACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSRATCS*SWATSA
Trigger: GGCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCT...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGGGCCACCTGTTCTTaGAGCTGGGCGACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVRATCS*SWATSA
Trigger: GGCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCT...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGCTCACTGTGGAGAGCTaGTGTCCGGGAGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVLTVES*CPGELA
Trigger: AGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAG...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTACACACACACGCTCTGTaGTCCACTGGGCAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLHTHAL*STGQRG
Trigger: CCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTG...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTCGTGCGGGGGTGAGGTaGAGTTATATGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPRAGVR*SYMVTH
Trigger: GTGTGTCACCATATAACTGCACCTCACCCCCGCACG...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAATTCTCTGCGAGTCATaGACACGTGCGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTILCES*TRAGVR
Trigger: CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCCCAGGGGTACACAATTaGTGGAATATTCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTPGVHN*WNILCE
Trigger: CTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGG...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACACTGAAGTGTAGGGGGTaGCTGAGAGCTGAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTLKCRG*LRAEPR
Trigger: ACGAGGCTCAGCTCTCAGGCACCCCCTACACTTCAG...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACTATGTAGGCAGCTGTTaGGCCAGGGATCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHYVGSC*ARDLAQ
Trigger: CTGAGCCAGATCCCTGGCCCAACAGCTGCCTACATA...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR CCA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACGCTGTCCGGGAGAGCTaGCTGTGCAGACGCTCAATT +
Preference number: 4 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNAVRES*LCRRSI
Trigger: AATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGC...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACCAGGCTGGCAGATGGTaGGAGGAGATTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNQAGRW*EEIWQP
Trigger: AGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTG...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTCCCGTGGCGTCAGGCTaGCAGATGGTGGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGPVASG*QMVGGD
Trigger: ATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGG...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGGTCCTAGAGAGTCTTaGCCCTGCGGTTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGGPRES*PCGCPE
Trigger: CTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACC...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTCCTAGAGAGTCTTaGCCCTGCGGTTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYGPRES*PCGCPE
Trigger: CTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACC...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACGGGCAAAGGGGGCATTaGCGTCACTTTTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHGQRGH*RHFSVP
Trigger: AGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCC...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCCGCTCTGTGCTCCACTaGGCAAAGGGGGCATTGGCG +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILRSVLH*AKGALA
Trigger: CGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCG...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACCCATGTCCTGAGGGGTaGCTGTCAATAAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHPCPEG*LSIRCG
Trigger: GCCACACCTTATTGACAGCCACCCCTCAGGACATGG...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCCCATGTCCTGAGGGGTaGCTGTCAATAAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGPCPEG*LSIRCG
Trigger: GCCACACCTTATTGACAGCCACCCCTCAGGACATGG...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCCTTGTCACCCAAATGTaGTCTAGCAGTGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTLVTQM*SSSADF
Trigger: GAAGTCTGCACTGCTAGACCACATTTGGGTGACAAG...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTGTTACTCTCATCAGCTaGCCGCCGGTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVVTLIS*PPVQAV
Trigger: CACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAAC...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTGTGCAGCTCCAGATCCTaGCCACCCTCAGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LWQWSPKPGPLEMQLQILCSSRS*PPSGFK
Trigger: TTTGAACCCTGAGGGTGGCCAGGATCTGGAGCTGCA...CAGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGGTCCACCTTTGGCAATaGTCCCCAAAGCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVVHLWQ*SPKPGP
Trigger: GGGGCCAGGCTTTGGGGACCATTGCCAAAGGTGGAC...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCATCTCAGCCAAGACTGTaGTCCACGGGCCTAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKASQPRL*STGLRH
Trigger: GTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACATCTCAGCCAAGACTGTaGTCCACGGGCCTAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTSQPRL*STGLRH
Trigger: GTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTGCCTCAAGTCCTCGATaGGATGGAGCACCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPSGFKETGPGVHNCWNIASSPR*DGAPGR
Trigger: CCTTCCCGGTGCTCCATCTCATCGAGGACTTGAGGC...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR TCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGGGTGTCAGAGGAGACTaGGGACCTGATTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLGVRGD*GPDSVP
Trigger: GGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACC...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCCATTTGATGCTGAGATaGTGTAGTTGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTHLMLR*CSWLVT
Trigger: AGTCACCAGCCAACTACATCATCTCAGCATCAAATG...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGCCCTGTGACTATCACTaGCACCGTCACTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVPCDYH*HRHWAP
Trigger: TGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGG...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTCCCTGTGACTATCACTaGCACCGTCACTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVPCDYH*HRHWAP
Trigger: TGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGG...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCGGGGTGCCTGAGAGCTaGGCCTCGTGGGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSGVPES*ASWECP
Trigger: TGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCC...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR GCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACGGGTCTCAAGAGATGTaGGGCTTAGCAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHGSQEM*GLAAPV
Trigger: AACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCC...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACATCCTCCTGCTCTCTCTaGTCCTTCTCCATGCCAACC +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTSSCSL*SFSMPT
Trigger: GGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGA...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGTCCTCCTGCTCTCTCTaGTCCTTCTCCATGCCAACC +
Preference number: 4 (lower is better)
Translates to: AQGYTIAGIFSASHAHVRSSCSL*SFSMPT
Trigger: GGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGA...CCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTAGGGCCACCTGTTCTTaGAGCTGGGCGACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGRATCS*SWATSA
Trigger: GGCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCT...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATTCTTGGCCCTGCGGTTaGCCGGAGCCCACCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHSWPCG*PEPTSS
Trigger: CGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGA...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACACACACACGCTCTGTaGTCCACTGGGCAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: ETGPGVHNCWNILCESCTHTHAL*STGQRG
Trigger: CCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTG...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACCCCTCGAAGATTGGGTaGATACTCTGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNPSKIG*ILCQVH
Trigger: GTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGG...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACCCTCGAAGATTGGGTaGATACTCTGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTPSKIG*ILCQVH
Trigger: GTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGG...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGATTCTCTGCGAGTCATaGACACGTGCGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVILCES*TRAGVR
Trigger: CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATTCTCTGCGAGTCATaGACACGTGCGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYILCES*TRAGVR
Trigger: CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGGGGAGTCTCGGCCACTaGTCTGATGACATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLGSLGH*SDDMGH
Trigger: GTGACCCATGTCATCAGAGCAGTGGCCGAGACTCCC...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528883.5
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTCCTCCTCTTCTTACTaGGTACGGGGCCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILSSSSY*VRGRGS
Trigger: GGAGCCTCGGCCCCGTACCCAGTAAGAAGAGGAGGA...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR CCA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCCCTGGGCTTCTACTTaGTCTGTGAGGACACTCACC +
Preference number: 4 (lower is better)
Translates to: LIPLISAKTVVHGPKALEPWAST*SVRTLT
Trigger: GGTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGG...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR CCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCGCTGTCCGGGAGAGCTaGCTGTGCAGACGCTCAATT +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSAVRES*LCRRSI
Trigger: AATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGC...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCTGGCAGCCTCTCCATTaGGCGTGGCTCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVWQPLH*AWLLKA
Trigger: AGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCA...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGGCAGCCTCTCCATTaGGCGTGGCTCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLWQPLH*AWLLKA
Trigger: AGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCA...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGGTGGGAGGAGATTTaGCAGCCTCTCCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLWWEEI*QPLHWA
Trigger: CGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCA...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACATGGTGGGAGGAGATTTaGCAGCCTCTCCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTWWEEI*QPLHWA
Trigger: CGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCA...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATCAGGCTGGCAGATGGTaGGAGGAGATTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYQAGRW*EEIWQP
Trigger: AGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTG...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATCAGGCTGGCAGATGGTaGGAGGAGATTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYQAGRW*EEIWQP
Trigger: AGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTG...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCAGGGCAAAGGGGGCATTaGCGTCACTTTTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKAGQRGH*RHFSVP
Trigger: AGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCC...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGCGCCGGTGCAGGCAGTaGGGGTTGAACTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRRRCRQ*GLNLLT
Trigger: TGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCG...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTGTTACTCTCATCAGCTaGCCGCCGGTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PPSGFKETGPGVHNCWNIVTLIS*PPVQAV
Trigger: CACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAAC...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGGTTACTCTCATCAGCTaGCCGCCGGTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NILCESCTRAGVRCSYMVVTLIS*PPVQAV
Trigger: CACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAAC...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACCACTCCCTCGAAGATTaGGTGCATACTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHHSLED*VHTLPG
Trigger: ACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTG...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTGTCCCCAGTGAAGCGTaGCTCCAGGATAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVVPSEA*LQDNEA
Trigger: GGCCTCATTATCCTGGAGCCACGCTTCACTGGGGAC...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCGTCCCCAGTGAAGCGTaGCTCCAGGATAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVVPSEA*LQDNEA
Trigger: GGCCTCATTATCCTGGAGCCACGCTTCACTGGGGAC...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACAAACTTGGTGGTCAGGTaGCGCCTGAGGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTNLVVR*RLRSVF
Trigger: AAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTT...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCAAACTTGGTGGTCAGGTaGCGCCTGAGGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKANLVVR*RLRSVF
Trigger: AAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTT...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGAACTTGGTGGTCAGGTaGCGCCTGAGGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: AEVPVAHPFDLSQDCGPRNLVVR*RLRSVF
Trigger: AAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTT...CCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTTCCTTGGCCGGACTTTaGCTGTGGTGGTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVSLAGL*LWWSVV
Trigger: CACCACTGACCACCACAGCCAAAGTCCGGCCAAGGA...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCGTCACTGGGCTCCATTaGGCAAATGTAGTCCGTCGA +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGVTGLH*ANVVRR
Trigger: TCGACGGACTACATTTGCCCAATGGAGCCCAGTGAC...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACGTCACTGGGCTCCATTaGGCAAATGTAGTCCGTCGA +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHVTGLH*ANVVRR
Trigger: TCGACGGACTACATTTGCCCAATGGAGCCCAGTGAC...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAGAGCTGCCTCTGGGCTaGACTCCTGCTCCTTATTCC +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLELPLG*TPAPYS
Trigger: GGAATAAGGAGCAGGAGTCCAGCCCAGAGGCAGCTC...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528883.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATCACAGGAGCTGCCTCTaGGCTGGACTCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYHRSCL*AGLLLL
Trigger: AAGGAGCAGGAGTCCAGCCCAGAGGCAGCTCCTGTG...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528883.5
CDS-3UTR TCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCAGGGCTGCTCTCTCCTaGGGAAGCTCCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCRAALS*GSSSIS
Trigger: GGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCT...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR TCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGGATGAGAGGTCATTaGCCACAGCAGTGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRWMRGH*PQQCRP
Trigger: GGGACGACACTGCTGTGGTCAATGACCTCTCATCCA...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGGTGTCAGAGGAGACTaGGGACCTGATTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTGVRGD*GPDSVP
Trigger: GGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACC...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGGCAAAGATCACATACTaGGCCAGGCCAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LIPLISAKTVVHGPKALEAKITY*ARPKSS
Trigger: GGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGC...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACTCCTTTTCCATGTCCTaGGGGGTGGCTGTCAATAAG +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHSFSMS*GVAVNK
Trigger: CTTATTGACAGCCACCCCTCAGGACATGGAAAAGGA...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCAGACCAATCAAGGCATTaGACTTGGTGGTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKADQSRH*TWWSGG
Trigger: GCCACCTGACCACCAAGTTCAATGCCTTGATTGGTC...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTTGGTGTGTAAGCTGGTaGGGCCATTTTCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPWCVSW*GHFLSL
Trigger: AAGCGAGAGAAAATGGCCTCACCAGCTTACACACCA...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACCCTGTGACTATCACTaGCACCGTCACTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ETGPGVHNCWNILCESCTPCDYH*HRHWAP
Trigger: TGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGG...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTCCCTGTGACTATCACTaGCACCGTCACTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGPCDYH*HRHWAP
Trigger: TGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGG...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTAAGTGTCTTTCCTCCTaGGTCCACCTTTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPKCLSS*VHLWQW
Trigger: CCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTT...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCAGTGTAGGGGGTGCCTaGGAGCTGAGCCTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSSVGGA*ELSLVG
Trigger: TCCCACGAGGCTCAGCTCTCAGGCACCCCCTACACT...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR GCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCTCCTCCTGCTCTCTCTaGTCCTTCTCCATGCCAACC +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFSSCSL*SFSMPT
Trigger: GGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGA...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCGGGAGAGCTGGCTGTaGAGACGCTCAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLRESWL*RRSISA
Trigger: TGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTCGGGAGAGCTGGCTGTaGAGACGCTCAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVRESWL*RRSISA
Trigger: TGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCG...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACGAGGACCTGATTCAGTaGCCGATGATGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHEDLIQ*PMMWMR
Trigger: TCTCATCCACATCATCGGGCACTGAATCAGGTCCTC...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCACCTCGTCGAAACTCTaGCATCCCCAGCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFTSSKL*HPQRVS
Trigger: ACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGT...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGACCTCGTCGAAACTCTaGCATCCCCAGCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVTSSKL*HPQRVS
Trigger: ACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGT...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACAACCTCGTCGAAACTCTaGCATCCCCAGCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTTSSKL*HPQRVS
Trigger: ACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGT...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGACCTCGTCGAAACTCTaGCATCCCCAGCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLTSSKL*HPQRVS
Trigger: ACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGT...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATAGAGAGTCTTGGCCCTaGGGTTGCCCGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHRESWP*GCPEPT
Trigger: GGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCT...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGCCCTCGAAGATTGGGTaGATACTCTGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVPSKIG*ILCQVH
Trigger: GTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGG...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCCCCTCGAAGATTGGGTaGATACTCTGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSPSKIG*ILCQVH
Trigger: GTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGG...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACGTGCGGGGGTGAGGTaGAGTTATATGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTRAGVR*SYMVTH
Trigger: GTGTGTCACCATATAACTGCACCTCACCCCCGCACG...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp AAGGCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTGCCTGAGAGCTGAGCGTGCGGGGGTGAGGTaGAGTTATATGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: KALELFPQLKCRGCLRAERAGVR*SYMVTH
Trigger: GTGTGTCACCATATAACTGCACCTCACCCCCGCACG...CTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTATTCTCTGCGAGTCATaGACACGTGCGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PPSGFKETGPGVHNCWNIILCES*TRAGVR
Trigger: CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTTGCTGGAATATTCTCTaGGAGTCATGCACACGTGCG +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPCWNIL*ESCTRA
Trigger: CGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAACCTGGGACTGGAGCTaGAGCTGTTTTCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTTWDWS*SCFPPF
Trigger: GAAAGGAGGAAAACAGCTGCAGCTCCAGTCCCAGGT...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTCCTTTTGCCTGCCTaGCCTCCTCCTCTTCTTACT +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKALLLPA*PPPLLT
Trigger: AGTAAGAAGAGGAGGAGGCCAGGCAGGCAAAAGGAG...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR CCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCCCCTGGGCTTCTACTTaGTCTGTGAGGACACTCACC +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSPWAST*SVRTLT
Trigger: GGTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGG...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAAGAAAGGGCTGTCCTTaGGTTCTAACACCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTRKGCP*VLTPGR
Trigger: CCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCT...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACAAGAAAGGGCTGTCCTTaGGTTCTAACACCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTRKGCP*VLTPGR
Trigger: CCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCT...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGTGGTGGGAGGAGATTTaGCAGCCTCTCCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: QGSKRLAQGYTIAGIFSAWWEEI*QPLHWA
Trigger: CGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCA...CGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGGGGCAAAGGGGGCATTaGCGTCACTTTTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVGQRGH*RHFSVP
Trigger: AGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCC...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATGGGCAAAGGGGGCATTaGCGTCACTTTTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYGQRGH*RHFSVP
Trigger: AGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCC...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AAGGCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTGCCTGAGAGCTGAGCCATGTCCTGAGGGGTaGCTGTCAATAAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KALELFPQLKCRGCLRAEPCPEG*LSIRCG
Trigger: GCCACACCTTATTGACAGCCACCCCTCAGGACATGG...CTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGCGCCGGTGCAGGCAGTaGGGGTTGAACTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: QGSKRLAQGYTIAGIFSARRCRQ*GLNLLT
Trigger: TGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCG...CGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTCGCCGGTGCAGGCAGTaGGGGTTGAACTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGRRCRQ*GLNLLT
Trigger: TGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCG...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACACTCCCTCGAAGATTaGGTGCATACTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKAHSLED*VHTLPG
Trigger: ACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTG...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTCCCCAGTGAAGCGTaGCTCCAGGATAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTVPSEA*LQDNEA
Trigger: GGCCTCATTATCCTGGAGCCACGCTTCACTGGGGAC...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGTCCCCAGTGAAGCGTaGCTCCAGGATAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGVPSEA*LQDNEA
Trigger: GGCCTCATTATCCTGGAGCCACGCTTCACTGGGGAC...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACGAGGAGCGTCTTTTGTaGGGGGATGTTGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHEERLL*GDVEKH
Trigger: ATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTC...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGGCCGGACTTTGGCTGTaGTGGTCAGTGGTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVAGLWL*WSVVCK
Trigger: CTTACACACCACTGACCACCACAGCCAAAGTCCGGC...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACATCCTTGGCCGGACTTTaGCTGTGGTGGTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ETGPGVHNCWNILCESCTSLAGL*LWWSVV
Trigger: CACCACTGACCACCACAGCCAAAGTCCGGCCAAGGA...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACACTAATCTGTCCCACCTaGTCCAGCCCATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTLICPT*SSPSSS
Trigger: TGAACTGGATGGGCTGGACCAGGTGGGACAGATTAG...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATGCAGCTCCAGATCCTaGCCACCCTCAGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLCSSRS*PPSGFK
Trigger: TTTGAACCCTGAGGGTGGCCAGGATCTGGAGCTGCA...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATTCTCAGCCAAGACTGTaGTCCACGGGCCTAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYSQPRL*STGLRH
Trigger: GTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCTGTGGTGGTTTACCTaGGACTGGAGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLLWWFT*DWSCSC
Trigger: ACAGCTGCAGCTCCAGTCCCAGGTAAACCACCACAG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533792.5
CDS-3UTR CCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACTAGCAGCACTGTGGTaGTTTACCTGGGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTLAALW*FTWDWS
Trigger: GCTCCAGTCCCAGGTAAACCACCACAGTGCTGCTAG...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533792.5
CDS-3UTR TCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTTCCCACCTTCAAACATaGGAGCCCAGAAGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGSHLQT*EPRSER
Trigger: TCGCTCGCTTCTGGGCTCTCATGTTTGAAGGTGGGA...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR TCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACACCGAAGGCCCTTGAGTaGCCATCACAATCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTPKALE*PSQSPL
Trigger: TAAAGGAGATTGTGATGGTCACTCAAGGGCCTTCGG...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATCTCTCCGAAGGCCCTTaGGTGACCATCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYLSEGP*VTITIS
Trigger: GGAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAG...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGCTCTCCGAAGGCCCTTaGGTGACCATCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: NILCESCTRAGVRCSYMVLSEGP*VTITIS
Trigger: GGAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAG...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCCCGGTTCTTCTTCATTaGTTGAGAGAGTTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGPVLLH*LREFSP
Trigger: CGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGG...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTCAAGAGAGCTTTTTCTaGGCCCTGGTTTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPQESFF*ALVSSD
Trigger: ATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTG...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTTGGATGAGAGGTCATTaGCCACAGCAGTGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGWMRGH*PQQCRP
Trigger: GGGACGACACTGCTGTGGTCAATGACCTCTCATCCA...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAGCAAAGATCACATACTaGGCCAGGCCAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLAKITY*ARPKSS
Trigger: GGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGC...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACATCCTTTTCCATGTCCTaGGGGGTGGCTGTCAATAAG +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTSFSMS*GVAVNK
Trigger: CTTATTGACAGCCACCCCTCAGGACATGGAAAAGGA...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACAGACCAATCAAGGCATTaGACTTGGTGGTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTDQSRH*TWWSGG
Trigger: GCCACCTGACCACCAAGTTCAATGCCTTGATTGGTC...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCCACACAGTGTTACTGTaGGCTCTCAGGGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSHTVLL*ALRVHR
Trigger: TCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTG...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGTGGCTTCACATTCTTTaGCCTCAGCTCCAACAGGCT +
Preference number: 4 (lower is better)
Translates to: AQGYTIAGIFSASHAHVRWLHIL*PQLQQA
Trigger: AGCCTGTTGGAGCTGAGGTCAAAGAATGTGAAGCCA...CCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS-3UTR GCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAGGGTCTCAAGAGATGTaGGGCTTAGCAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLGSQEM*GLAAPV
Trigger: AACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCC...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTGGGTCTCAAGAGATGTaGGGCTTAGCAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVGSQEM*GLAAPV
Trigger: AACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCC...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTCCTCCTGCTCTCTCTaGTCCTTCTCCATGCCAACC +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILSSCSL*SFSMPT
Trigger: GGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGA...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCAGGTGCCTGAGCTCTTaGAGTAACTCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGRCLSS*SNSSAF
Trigger: AAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCT...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACCCAGAAGATACCCACTaGCTGGCAAAGATCACATAC +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHPEDTH*LAKITY
Trigger: GTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGG...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTCCAGAAGATACCCACTaGCTGGCAAAGATCACATAC +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPPEDTH*LAKITY
Trigger: GTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGG...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCGTGCGGGGGTGAGGTaGAGTTATATGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: PPSGFKETGPGVHNCWNIRAGVR*SYMVTH
Trigger: GTGTGTCACCATATAACTGCACCTCACCCCCGCACG...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCTCTGGGCTGGACTCCTaGTCCTTATTCCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSSGLDS*SLFLFQ
Trigger: CTGGAAGAGGAATAAGGAGCAGGAGTCCAGCCCAGA...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528883.5
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCAAGTCCTCGATGAGATaGAGCACCGGGAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILKSSMR*STGKGF
Trigger: GAACCCCTTCCCGGTGCTCCATCTCATCGAGGACTT...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR CCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACTAGCAGCACTGTGGTaGTTTACCTGGGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTLAALW*FTWDKL
Trigger: GAGCTTGTCCCAGGTAAACCACCACAGTGCTGCTAG...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR CCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGACCTGTTCTTGCAGCTaGGCGACTTCAGCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLTCSCS*ATSALV
Trigger: CACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGT...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCGCTGTCCGGGAGAGCTaGCTGTGCAGACGCTCAATT +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPAVRES*LCRRSI
Trigger: AATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGC...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACTTTACCTTCCGGTACTaGTTTAACAGCCCCGTAAGC +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHFTFRY*FNSPVS
Trigger: GCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAA...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCCCATGTCCTGAGGGGTaGCTGTCAATAAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILPCPEG*LSIRCG
Trigger: GCCACACCTTATTGACAGCCACCCCTCAGGACATGG...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGCCATCACCCTGTGGTTaGACCACTGTACAACTTCTG +
Preference number: 4 (lower is better)
Translates to: AQGYTIAGIFSASHAHVRPSPCG*TTVQLL
Trigger: CAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGG...CCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACACACTCCATCACCCTGTaGTTGGACCACTGTACAACT +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTHSITL*LDHCTT
Trigger: AGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTG...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGCACTCCATCACCCTGTaGTTGGACCACTGTACAACT +
Preference number: 4 (lower is better)
Translates to: AEVPVAHPFDLSQDCGPRHSITL*LDHCTT
Trigger: AGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTG...CCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATCACTCCCTCGAAGATTaGGTGCATACTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYHSLED*VHTLPG
Trigger: ACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTG...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTAACTTGGTGGTCAGGTaGCGCCTGAGGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTNLVVR*RLRSVF
Trigger: AAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTT...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATGGACTTTGGCTGTGGTaGTCAGTGGTGTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYGLWLW*SVVCKL
Trigger: CAGCTTACACACCACTGACCACCACAGCCAAAGTCC...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCGGACTTTGGCTGTGGTaGTCAGTGGTGTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSGLWLW*SVVCKL
Trigger: CAGCTTACACACCACTGACCACCACAGCCAAAGTCC...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGGCCGGACTTTGGCTGTaGTGGTCAGTGGTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: QGSKRLAQGYTIAGIFSAAGLWL*WSVVCK
Trigger: CTTACACACCACTGACCACCACAGCCAAAGTCCGGC...CGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGGCCGGACTTTGGCTGTaGTGGTCAGTGGTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: NILCESCTRAGVRCSYMVAGLWL*WSVVCK
Trigger: CTTACACACCACTGACCACCACAGCCAAAGTCCGGC...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATGTCACTGGGCTCCATTaGGCAAATGTAGTCCGTCGA +
Preference number: 4 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYVTGLH*ANVVRR
Trigger: TCGACGGACTACATTTGCCCAATGGAGCCCAGTGAC...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCTAATCTGTCCCACCTaGTCCAGCCCATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLLICPT*SSPSSS
Trigger: TGAACTGGATGGGCTGGACCAGGTGGGACAGATTAG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTACTAATCTGTCCCACCTaGTCCAGCCCATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLLICPT*SSPSSS
Trigger: TGAACTGGATGGGCTGGACCAGGTGGGACAGATTAG...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTTCGTGGGAGTGTCCATaGTCTCTGGACCTGCATCGA +
Preference number: 4 (lower is better)
Translates to: PPSGFKETGPGVHNCWNISWECP*SLDLHR
Trigger: TCGATGCAGGTCCAGAGACCATGGACACTCCCACGA...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGTGGTTTACCTGGGACTaGAGCTGCAGCTGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LIPLISAKTVVHGPKALEWFTWD*SCSCFP
Trigger: AGGAAAACAGCTGCAGCTCCAGTCCCAGGTAAACCA...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533792.5
CDS-3UTR TCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCTTAGCAGCTCCTGTTaGAGCATCTCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLLSSSC*SISSAA
Trigger: TGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATCTTAGCAGCTCCTGTTaGAGCATCTCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYLSSSC*SISSAA
Trigger: TGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAG...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCCGAAGGCCCTTGAGTaGCCATCACAATCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLPKALE*PSQSPL
Trigger: TAAAGGAGATTGTGATGGTCACTCAAGGGCCTTCGG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCCGAAGGCCCTTGAGTaGCCATCACAATCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVPKALE*PSQSPL
Trigger: TAAAGGAGATTGTGATGGTCACTCAAGGGCCTTCGG...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCCCAAAGCCTGCTCTCCGAAGGCCCTTaGGTGACCATCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: SLSVFPPESTFGNGPQSLLSEGP*VTITIS
Trigger: GGAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAG...CAGGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGCCGGTTCTTCTTCATTaGTTGAGAGAGTTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: AQGYTIAGIFSASHAHVRPVLLH*LREFSP
Trigger: CGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGG...CCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCTGGATGAGAGGTCATTaGCCACAGCAGTGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCWMRGH*PQQCRP
Trigger: GGGACGACACTGCTGTGGTCAATGACCTCTCATCCA...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGCAAAGATCACATACTaGGCCAGGCCAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYAKITY*ARPKSS
Trigger: GGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGC...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACATCCTTTTCCATGTCCTaGGGGGTGGCTGTCAATAAG +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTSFSMS*GVAVNK
Trigger: CTTATTGACAGCCACCCCTCAGGACATGGAAAAGGA...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACCATTTGATGCTGAGATaGTGTAGTTGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHHLMLR*CSWLVT
Trigger: AGTCACCAGCCAACTACATCATCTCAGCATCAAATG...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGTTGACATGCAGCACGTaGATGGCACATTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: AEVPVAHPFDLSQDCGPRLTCST*MAHLML
Trigger: CAGCATCAAATGTGCCATTCACGTGCTGCATGTCAA...CCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGACCAATCAAGGCATTaGACTTGGTGGTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYDQSRH*TWWSGG
Trigger: GCCACCTGACCACCAAGTTCAATGCCTTGATTGGTC...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCCCTGTGACTATCACTaGCACCGTCACTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSPCDYH*HRHWAP
Trigger: TGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGG...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR TCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTCACACAGTGTTACTGTaGGCTCTCAGGGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTHTVLL*ALRVHR
Trigger: TCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTG...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAAGTGTCTTTCCTCCTaGGTCCACCTTTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVKCLSS*VHLWQW
Trigger: CCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTT...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCTGGCCACAATCTTCTaGCCTTTCATCTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVLATIF*PFICPT
Trigger: AGTGGGACAGATGAAAGGTCAGAAGATTGTGGCCAG...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS-3UTR GCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACAGTGAGGACACTCACCTaGAATATGAGGGACTCCTTA +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTVRTLT*NMRDSL
Trigger: TAAGGAGTCCCTCATATTGCAGGTGAGTGTCCTCAC...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCAGACGCTCAATTTCTaGATCTTTCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLQTLNF*IFQGHL
Trigger: CAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCCGGGAGAGCTGGCTGTaGAGACGCTCAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCRESWL*RRSISA
Trigger: TGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCG...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGAAAGTGGGATATTTGTaGTCCGCCAAGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LIPLISAKTVVHGPKALEKVGYL*SAKKGL
Trigger: CAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTT...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp AAGGCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTGCCTGAGAGCTGAGGAGGACCTGATTCAGTaGCCGATGATGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: KALELFPQLKCRGCLRAEEDLIQ*PMMWMR
Trigger: TCTCATCCACATCATCGGGCACTGAATCAGGTCCTC...CTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACCAGAAGATACCCACTaGCTGGCAAAGATCACATAC +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKAPEDTH*LAKITY
Trigger: GTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGG...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCTGCTGGAATATTCTCTaGGAGTCATGCACACGTGCG +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFCWNIL*ESCTRA
Trigger: CGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACCAGGGGTACACAATTaGTGGAATATTCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTPGVHN*WNILCE
Trigger: CTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGG...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACCCAGGGGTACACAATTaGTGGAATATTCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNPGVHN*WNILCE
Trigger: CTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGG...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGAAGTGTAGGGGGTaGCTGAGAGCTGAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSLKCRG*LRAEPR
Trigger: ACGAGGCTCAGCTCTCAGGCACCCCCTACACTTCAG...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACACGAATCTTTTCTCCCTaGGCTTCTACTTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTRIFSP*ASTWSV
Trigger: CACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCG...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACGAATCTTTTCTCCCTaGGCTTCTACTTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKARIFSP*ASTWSV
Trigger: CACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCG...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR CCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGG +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRIRSSF*VSRDVR
Trigger: CCGCACATCTCTTGAGACCCAGAAGCTCGATCTGAT...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATACCTGTTCTTGCAGCTaGGCGACTTCAGCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYTCSCS*ATSALV
Trigger: CACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGT...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCACCTGTTCTTGCAGCTaGGCGACTTCAGCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILTCSCS*ATSALV
Trigger: CACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGT...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGAACACCGGGAAGGGCTaGTTCCCATCCATACACTTA +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVNTGKG*FPSIHL
Trigger: TAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTT...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATAGAAAGGGCTGTCCTTaGGTTCTAACACCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYRKGCP*VLTPGR
Trigger: CCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCT...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAATTCCGTTTACCATCTaGTGTCAGAGGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTIPFTI*CQRRLR
Trigger: CCTCAGTCTCCTCTGACACCAGATGGTAAACGGAAT...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCAAGATACCCACTGCCTaGCAAAGATCACATACTGAG +
Preference number: 4 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGKIPTA*QRSHTE
Trigger: CTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTT...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAGCTGTCAATAAGGTGTaGCCAGAAGATACCCACTGC +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLAVNKV*PEDTHC
Trigger: GCAGTGGGTATCTTCTGGCCACACCTTATTGACAGC...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACACTTGTCACCCAAATGTaGTCTAGCAGTGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTLVTQM*SSSADF
Trigger: GAAGTCTGCACTGCTAGACCACATTTGGGTGACAAG...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACCATCACCCTGTGGTTaGACCACTGTACAACTTCTG +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTPSPCG*TTVQLL
Trigger: CAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGG...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATCCATCACCCTGTGGTTaGACCACTGTACAACTTCTG +
Preference number: 4 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYPSPCG*TTVQLL
Trigger: CAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGG...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACTCCATCACCCTGTaGTTGGACCACTGTACAACT +
Preference number: 4 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTHSITL*LDHCTT
Trigger: AGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTG...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTGAGGAGCGTCTTTTGTaGGGGGATGTTGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVEERLL*GDVEKH
Trigger: ATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTC...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCAACTTGGTGGTCAGGTaGCGCCTGAGGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPNLVVR*RLRSVF
Trigger: AAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTT...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCGGACTTTGGCTGTGGTaGTCAGTGGTGTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILGLWLW*SVVCKL
Trigger: CAGCTTACACACCACTGACCACCACAGCCAAAGTCC...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCGCCGGACTTTGGCTGTaGTGGTCAGTGGTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPAGLWL*WSVVCK
Trigger: CTTACACACCACTGACCACCACAGCCAAAGTCCGGC...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCTCCTTGGCCGGACTTTaGCTGTGGTGGTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSSLAGL*LWWSVV
Trigger: CACCACTGACCACCACAGCCAAAGTCCGGCCAAGGA...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATCTAATCTGTCCCACCTaGTCCAGCCCATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYLICPT*SSPSSS
Trigger: TGAACTGGATGGGCTGGACCAGGTGGGACAGATTAG...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCTCGTGGGAGTGTCCATaGTCTCTGGACCTGCATCGA +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPSWECP*SLDLHR
Trigger: TCGATGCAGGTCCAGAGACCATGGACACTCCCACGA...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCTCTCAGCCAAGACTGTaGTCCACGGGCCTAAGGCAC +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSSQPRL*STGLRH
Trigger: GTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTTACTAGCAGCACTGTaGTGGTTTACCTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLLLAAL*WFTWDW
Trigger: CCAGTCCCAGGTAAACCACCACAGTGCTGCTAGTAA...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533792.5
CDS-3UTR TCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTACTTCTACTTGGTCTGTaGGGACACTCACCTGCAATA +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLLLLGL*GHSPAI
Trigger: TATTGCAGGTGAGTGTCCTCACAGACCAAGTAGAAG...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR TCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATTCTCTTCAGCAGCATTaGGTTTCACCTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYSLQQH*VSPGVL
Trigger: AAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGA...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCCGGTTCTTCTTCATTaGTTGAGAGAGTTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLPVLLH*LREFSP
Trigger: CGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGCCGGTTCTTCTTCATTaGTTGAGAGAGTTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRPVLLH*LREFSP
Trigger: CGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGG...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCTTGACATGCAGCACGTaGATGGCACATTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSLTCST*MAHLML
Trigger: CAGCATCAAATGTGCCATTCACGTGCTGCATGTCAA...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTTGACATGCAGCACGTaGATGGCACATTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYLTCST*MAHLML
Trigger: CAGCATCAAATGTGCCATTCACGTGCTGCATGTCAA...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCGACCAATCAAGGCATTaGACTTGGTGGTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPDQSRH*TWWSGG
Trigger: GCCACCTGACCACCAAGTTCAATGCCTTGATTGGTC...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR TCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATTGGTGTGTAAGCTGGTaGGGCCATTTTCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYWCVSW*GHFLSL
Trigger: AAGCGAGAGAAAATGGCCTCACCAGCTTACACACCA...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCCCAAAGCCTGCACACAGTGTTACTGTaGGCTCTCAGGGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: SLSVFPPESTFGNGPQSLHTVLL*ALRVHR
Trigger: TCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTG...CAGGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACAGGTGCAGTTATATGGTaGCACACACAGTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTGAVIW*HTQCYC
Trigger: ACAGTAACACTGTGTGTGTCACCATATAACTGCACC...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGAGAAGAGACCACCTCTaGAGTAAGGCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: LIPLISAKTVVHGPKALERRDHL*SKAQHN
Trigger: ATTGTGTTGTGCCTTACTTCAGAGGTGGTCTCTTCT...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGCTTCTACTTGGTCTGTaGGGACACTCACCTTACCAG +
Preference number: 4 (lower is better)
Translates to: NILCESCTRAGVRCSYMVLLLGL*GHSPYQ
Trigger: CTGGTAAGGTGAGTGTCCTCACAGACCAAGTAGAAG...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528883.5
CDS-3UTR GCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGAGGTGCCTGAGCTCTTaGAGTAACTCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRRCLSS*SNSSAF
Trigger: AAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCT...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGGTGCCTGAGCTCTTaGAGTAACTCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVRCLSS*SNSSAF
Trigger: AAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCT...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCAGGTGCCTGAGCTCTTaGAGTAACTCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSRCLSS*SNSSAF
Trigger: AAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCT...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAAAAGTGGGATATTTGTaGTCCGCCAAGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLKVGYL*SAKKGL
Trigger: CAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTT...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGAAAGTGGGATATTTGTaGTCCGCCAAGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRKVGYL*SAKKGL
Trigger: CAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTT...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGAGGACCTGATTCAGTaGCCGATGATGTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGEDLIQ*PMMWMR
Trigger: TCTCATCCACATCATCGGGCACTGAATCAGGTCCTC...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCATTCCTGTGGAGTGGGTaGTTAATTCCTAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLLIPLISAKTVVHGPKAFLWSG*LIPSSF
Trigger: AAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAA...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATTGCTGGAATATTCTCTaGGAGTCATGCACACGTGCG +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYCWNIL*ESCTRA
Trigger: CGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCCCAGGGGTACACAATTaGTGGAATATTCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSPGVHN*WNILCE
Trigger: CTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGG...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATCTGAAGTGTAGGGGGTaGCTGAGAGCTGAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHLKCRG*LRAEPR
Trigger: ACGAGGCTCAGCTCTCAGGCACCCCCTACACTTCAG...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCATGTGTTTCCACTGGTaGTGGTCCAGCCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPMCFHW*WSSPSS
Trigger: ACTGGATGGGCTGGACCAGCACCAGTGGAAACACAT...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534552.1
CDS-3UTR GCA 90 bp GCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGAGCTCCAACAGGCTTTaGTTTCCATTTCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AQGYTIAGIFSASHAHVRSSNRL*FPFRSA
Trigger: AGCTGAACGAAATGGAAAGCAAAGCCTGTTGGAGCT...CCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS-3UTR CCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTTACTAGCAGCACTGTaGTGGTTTACCTGGGACAAG +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRLLAAL*WFTWDK
Trigger: CTTGTCCCAGGTAAACCACCACAGTGCTGCTAGTAA...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR CCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATCGAATCTTTTCTCCCTaGGCTTCTACTTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYRIFSP*ASTWSV
Trigger: CACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCG...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGGCATTGAGTTTCACCTaGTGTCCTTCCAGACACACT +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVALSFT*CPSRHT
Trigger: AGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGC...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGG +
Preference number: 4 (lower is better)
Translates to: PPSGFKETGPGVHNCWNIIRSSF*VSRDVR
Trigger: CCGCACATCTCTTGAGACCCAGAAGCTCGATCTGAT...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTGGTCCTTATCTTCATTaGCAAGCAGCAAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PLAMVPKAWPLRDAAPDPGPYLH*QAAKFP
Trigger: TGGAAACTTTGCTGCTTGCCAATGAAGATAAGGACC...AGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTGGGTCCTTATCTTCATTaGCAAGCAGCAAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LWQWSPKPGPLEMQLQILGPYLH*QAAKFP
Trigger: TGGAAACTTTGCTGCTTGCCAATGAAGATAAGGACC...CAGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTTTACCTTCCGGTACTaGTTTAACAGCCCCGTAAGC +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLFTFRY*FNSPVS
Trigger: GCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAA...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGCTTTTTCTGAGCCCTaGTTTCCAGTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTAFSEP*FPVISV
Trigger: CACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGC...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATAACACCGGGAAGGGCTaGTTCCCATCCATACACTTA +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYNTGKG*FPSIHL
Trigger: TAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTT...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGATTCCGTTTACCATCTaGTGTCAGAGGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRIPFTI*CQRRLR
Trigger: CCTCAGTCTCCTCTGACACCAGATGGTAAACGGAAT...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCGCTGTCAATAAGGTGTaGCCAGAAGATACCCACTGC +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILAVNKV*PEDTHC
Trigger: GCAGTGGGTATCTTCTGGCCACACCTTATTGACAGC...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCTTGTCACCCAAATGTaGTCTAGCAGTGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVLVTQM*SSSADF
Trigger: GAAGTCTGCACTGCTAGACCACATTTGGGTGACAAG...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGCCATCACCCTGTGGTTaGACCACTGTACAACTTCTG +
Preference number: 4 (lower is better)
Translates to: QGSKRLAQGYTIAGIFSAPSPCG*TTVQLL
Trigger: CAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGG...CGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCCACTCCCTCGAAGATTaGGTGCATACTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCHSLED*VHTLPG
Trigger: ACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTG...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGAGGAGCGTCTTTTGTaGGGGGATGTTGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGEERLL*GDVEKH
Trigger: ATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTC...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCGGACTTTGGCTGTGGTaGTCAGTGGTGTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPGLWLW*SVVCKL
Trigger: CAGCTTACACACCACTGACCACCACAGCCAAAGTCC...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCGTCACTGGGCTCCATTaGGCAAATGTAGTCCGTCGA +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPVTGLH*ANVVRR
Trigger: TCGACGGACTACATTTGCCCAATGGAGCCCAGTGAC...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCTGCAGCTCCAGATCCTaGCCACCCTCAGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSCSSRS*PPSGFK
Trigger: TTTGAACCCTGAGGGTGGCCAGGATCTGGAGCTGCA...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAAGTGTCCATGGTCTCTaGACCTGCATCGAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLSVHGL*TCIEVH
Trigger: ATGAACTTCGATGCAGGTCCAGAGACCATGGACACT...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCAGTGTCCATGGTCTCTaGACCTGCATCGAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSSVHGL*TCIEVH
Trigger: ATGAACTTCGATGCAGGTCCAGAGACCATGGACACT...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTAGTGTCCATGGTCTCTaGACCTGCATCGAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVSVHGL*TCIEVH
Trigger: ATGAACTTCGATGCAGGTCCAGAGACCATGGACACT...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCTCGTGGGAGTGTCCATaGTCTCTGGACCTGCATCGA +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSSWECP*SLDLHR
Trigger: TCGATGCAGGTCCAGAGACCATGGACACTCCCACGA...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGATTCCATTGTCACTGTaGCAGAAGTCCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRIPLSL*QKSLLL
Trigger: GAGCAACAGGGACTTCTGCCACAGTGACAATGGAAT...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCTGTTTCCACTGGTGCTaGTCCAGCCCATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPCFHWC*SSPSSS
Trigger: TGAACTGGATGGGCTGGACCAGCACCAGTGGAAACA...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534552.1
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCTTCATGTGTTTCCACTaGTGCTGGTCCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPFMCFH*CWSSPS
Trigger: GGATGGGCTGGACCAGCACCAGTGGAAACACATGAA...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534552.1
CDS-3UTR TCA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGCTTCTACTTGGTCTGTaGGGACACTCACCTGCAATA +
Preference number: 4 (lower is better)
Translates to: NILCESCTRAGVRCSYMVLLLGL*GHSPAI
Trigger: TATTGCAGGTGAGTGTCCTCACAGACCAAGTAGAAG...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR TCA 90 bp CAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGTCTCTTCAGCAGCATTaGGTTTCACCTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: QGSKRLAQGYTIAGIFSASLQQH*VSPGVL
Trigger: AAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGA...CGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR TCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTCTCTTCAGCAGCATTaGGTTTCACCTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILSLQQH*VSPGVL
Trigger: AAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGA...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR TCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCTTAGCAGCTCCTGTTaGAGCATCTCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMLSSSC*SISSAA
Trigger: TGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAG...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR TCA 90 bp TCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCCCAAAGCCTGCCGAAGGCCCTTGAGTaGCCATCACAATCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SLSVFPPESTFGNGPQSLPKALE*PSQSPL
Trigger: TAAAGGAGATTGTGATGGTCACTCAAGGGCCTTCGG...CAGGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTCAAGAGAGCTTTTTCTaGGCCCTGGTTTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGQESFF*ALVSSD
Trigger: ATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTG...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACAAGAGAGCTTTTTCTaGGCCCTGGTTTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ETGPGVHNCWNILCESCTQESFF*ALVSSD
Trigger: ATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTG...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCAAGAGAGCTTTTTCTaGGCCCTGGTTTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PPSGFKETGPGVHNCWNIQESFF*ALVSSD
Trigger: ATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTG...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATTGGATGAGAGGTCATTaGCCACAGCAGTGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHWMRGH*PQQCRP
Trigger: GGGACGACACTGCTGTGGTCAATGACCTCTCATCCA...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGTCCTTTTCCATGTCCTaGGGGGTGGCTGTCAATAAG +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMSFSMS*GVAVNK
Trigger: CTTATTGACAGCCACCCCTCAGGACATGGAAAAGGA...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATCATTTGATGCTGAGATaGTGTAGTTGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYHLMLR*CSWLVT
Trigger: AGTCACCAGCCAACTACATCATCTCAGCATCAAATG...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTACATTTGATGCTGAGATaGTGTAGTTGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLHLMLR*CSWLVT
Trigger: AGTCACCAGCCAACTACATCATCTCAGCATCAAATG...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGTTGACATGCAGCACGTaGATGGCACATTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: NILCESCTRAGVRCSYMVLTCST*MAHLML
Trigger: CAGCATCAAATGTGCCATTCACGTGCTGCATGTCAA...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCTGGTGTGTAAGCTGGTaGGGCCATTTTCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCWCVSW*GHFLSL
Trigger: AAGCGAGAGAAAATGGCCTCACCAGCTTACACACCA...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGTGGTGTGTAAGCTGGTaGGGCCATTTTCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMWCVSW*GHFLSL
Trigger: AAGCGAGAGAAAATGGCCTCACCAGCTTACACACCA...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCCCAAAGCCTGAAGTGTCTTTCCTCCTaGGTCCACCTTTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: SLSVFPPESTFGNGPQSLKCLSS*VHLWQW
Trigger: CCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTT...CAGGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAAGAAGAGACCACCTCTaGAGTAAGGCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLRRDHL*SKAQHN
Trigger: ATTGTGTTGTGCCTTACTTCAGAGGTGGTCTCTTCT...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATATGATCCCGTCCATTTaGTCCAGGGCAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHMIPSI*SRAASS
Trigger: GCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCAT...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR GCA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGACCATCACTAAGATCTaGACCTGTTTTAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVTITKI*TCFSAC
Trigger: GCAGGCACTAAAACAGGTGCAGATCTTAGTGATGGT...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR GCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCCAGACGCTCAATTTCTaGATCTTTCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCQTLNF*IFQGHL
Trigger: CAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTG...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATCGGGAGAGCTGGCTGTaGAGACGCTCAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHRESWL*RRSISA
Trigger: TGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCG...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCAAAGTGGGATATTTGTaGTCCGCCAAGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILKVGYL*SAKKGL
Trigger: CAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTT...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATTTCCTGTGGAGTGGGTaGTTAATTCCTAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYFLWSG*LIPSSF
Trigger: AAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAA...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCTTCCTGTGGAGTGGGTaGTTAATTCCTAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFFLWSG*LIPSSF
Trigger: AAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAA...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATCCCTGGGCTTCTACTTaGTCTGTGAGGACACTCACC +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHPWAST*SVRTLT
Trigger: GGTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGG...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR CCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCATTGAGTTTCACCTaGTGTCCTTCCAGACACACT +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTALSFT*CPSRHT
Trigger: AGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGC...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGCATTGAGTTTCACCTaGTGTCCTTCCAGACACACT +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYALSFT*CPSRHT
Trigger: AGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGC...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCACCTGTTCTTGCAGCTaGGCGACTTCAGCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSTCSCS*ATSALV
Trigger: CACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGT...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGTTTACCTTCCGGTACTaGTTTAACAGCCCCGTAAGC +
Preference number: 4 (lower is better)
Translates to: QGSKRLAQGYTIAGIFSAFTFRY*FNSPVS
Trigger: GCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAA...CGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGGCTTTTTCTGAGCCCTaGTTTCCAGTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVAFSEP*FPVISV
Trigger: CACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGC...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCGCTTTTTCTGAGCCCTaGTTTCCAGTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFAFSEP*FPVISV
Trigger: CACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGC...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATATTCCGTTTACCATCTaGTGTCAGAGGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYIPFTI*CQRRLR
Trigger: CCTCAGTCTCCTCTGACACCAGATGGTAAACGGAAT...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGAAGATACCCACTGCCTaGCAAAGATCACATACTGAG +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRKIPTA*QRSHTE
Trigger: CTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTT...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCAAGATACCCACTGCCTaGCAAAGATCACATACTGAG +
Preference number: 4 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVKIPTA*QRSHTE
Trigger: CTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTT...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGCTGTCAATAAGGTGTaGCCAGAAGATACCCACTGC +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCAVNKV*PEDTHC
Trigger: GCAGTGGGTATCTTCTGGCCACACCTTATTGACAGC...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATACAAGCTTCTTCCTGTaGAGTGGGTGCTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYTSFFL*SGCLIP
Trigger: AGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGT...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATACAAGCTTCTTCCTGTaGAGTGGGTGCTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: CWNILCESCTRAGVRCSYTSFFL*SGCLIP
Trigger: AGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGT...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTCTTGTCACCCAAATGTaGTCTAGCAGTGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTLVTQM*SSSADF
Trigger: GAAGTCTGCACTGCTAGACCACATTTGGGTGACAAG...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTGTTACTCTCATCAGCTaGCCGCCGGTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HVKVSLSVFPPESTFGNGVTLIS*PPVQAV
Trigger: CACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAAC...ACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACTCCATCACCCTGTaGTTGGACCACTGTACAACT +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMHSITL*LDHCTT
Trigger: AGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTG...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCCCAAAGCCTGAGGGTTCAAAGAGACTaGCCCAGGGGTACACAATTG +
Preference number: 4 (lower is better)
Translates to: SLSVFPPESTFGNGPQSLRVQRD*PRGTQL
Trigger: CAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCT...CAGGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGACTGCTCTGATGACATaGGTCACGTTTACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVTALMT*VTFTAL
Trigger: AAGAGCAGTAAACGTGACCCATGTCATCAGAGCAGT...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528883.5
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCAGCACAGTCACCACTTaGATCTCACGTGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILSTVTT*ISRVSR
Trigger: TCTGGATACACGTGAGATCCAAGTGGTGACTGTGCT...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS-3UTR TCA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTAGAAATTTCCTaGCTGAGTTCTTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHSVEIS*LSSSDF
Trigger: AAAATCCGAAGAACTCAGTCAGGAAATTTCTACACT...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCTGGTGTGTAAGCTGGTaGGGCCATTTTCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSWCVSW*GHFLSL
Trigger: AAGCGAGAGAAAATGGCCTCACCAGCTTACACACCA...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR TCA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGGTGCAGTTATATGGTaGCACACACAGTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGGAVIW*HTQCYC
Trigger: ACAGTAACACTGTGTGTGTCACCATATAACTGCACC...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCAGAAGAGACCACCTCTaGAGTAAGGCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILRRDHL*SKAQHN
Trigger: ATTGTGTTGTGCCTTACTTCAGAGGTGGTCTCTTCT...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAACTTTGATTTTGAGGTaGCTGAGCTCTTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLTLILR*LSSCSN
Trigger: GTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGT...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGACTTTGATTTTGAGGTaGCTGAGCTCTTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLTLILR*LSSCSN
Trigger: GTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGT...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGACTTTGATTTTGAGGTaGCTGAGCTCTTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVTLILR*LSSCSN
Trigger: GTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGT...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILHGLWT*IEVHVF
Trigger: AAACACATGAACTTCGATGCAGGTCCAGAGACCATG...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGGGTCCTTATCTTCATTaGCAAGCAGCAAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLGPYLH*QAAKFP
Trigger: TGGAAACTTTGCTGCTTGCCAATGAAGATAAGGACC...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCTTTTTCTGAGCCCTaGTTTCCAGTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTAFSEP*FPVISV
Trigger: CACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGC...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGATTCCGTTTACCATCTaGTGTCAGAGGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMIPFTI*CQRRLR
Trigger: CCTCAGTCTCCTCTGACACCAGATGGTAAACGGAAT...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTACAAGCTTCTTCCTGTaGAGTGGGTGCTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTTSFFL*SGCLIP
Trigger: AGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGT...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCACAAGCTTCTTCCTGTaGAGTGGGTGCTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: PSGFKETGPGVHNCWNILTSFFL*SGCLIP
Trigger: AGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGT...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGAACTGGTCTTTGTACTaGGGTAAGCCAATATCATCA +
Preference number: 4 (lower is better)
Translates to: LIPLISAKTVVHGPKALENWSLY*GKPISS
Trigger: TGATGATATTGGCTTACCCCAGTACAAAGACCAGTT...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCGCCGGTGCAGGCAGTaGGGGTTGAACTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: HVKVSLSVFPPESTFGNGRRCRQ*GLNLLT
Trigger: TGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCG...ACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCATTCCATTGTCACTGTaGCAGAAGTCCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SGFKETGPGVHNCWNILCIPLSL*QKSLLL
Trigger: GAGCAACAGGGACTTCTGCCACAGTGACAATGGAAT...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCATTCCATTGTCACTGTaGCAGAAGTCCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPIPLSL*QKSLLL
Trigger: GAGCAACAGGGACTTCTGCCACAGTGACAATGGAAT...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR TCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCAGAAGAGACCACCTCTaGAGTAAGGCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPRRDHL*SKAQHN
Trigger: ATTGTGTTGTGCCTTACTTCAGAGGTGGTCTCTTCT...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR GCA 90 bp TCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCCCAAAGCCTGCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: SLSVFPPESTFGNGPQSLHGLWT*IEVHVF
Trigger: AAACACATGAACTTCGATGCAGGTCCAGAGACCATG...CAGGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMHGLWT*IEVHVF
Trigger: AAACACATGAACTTCGATGCAGGTCCAGAGACCATG...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPHGLWT*IEVHVF
Trigger: AAACACATGAACTTCGATGCAGGTCCAGAGACCATG...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGG +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHIRSSF*VSRDVR
Trigger: CCGCACATCTCTTGAGACCCAGAAGCTCGATCTGAT...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGGTCCTTATCTTCATTaGCAAGCAGCAAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTGPYLH*QAAKFP
Trigger: TGGAAACTTTGCTGCTTGCCAATGAAGATAAGGACC...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCAACTGGTCTTTGTACTaGGGTAAGCCAATATCATCA +
Preference number: 4 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSNWSLY*GKPISS
Trigger: TGATGATATTGGCTTACCCCAGTACAAAGACCAGTT...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTAACTGGTCTTTGTACTaGGGTAAGCCAATATCATCA +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVNWSLY*GKPISS
Trigger: TGATGATATTGGCTTACCCCAGTACAAAGACCAGTT...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATAGGGTTCAAAGAGACTaGCCCAGGGGTACACAATTG +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHRVQRD*PRGTQL
Trigger: CAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCT...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCAGTGTCCATGGTCTCTaGACCTGCATCGAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSSVHGL*TCIEVH
Trigger: ATGAACTTCGATGCAGGTCCAGAGACCATGGACACT...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR TCA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGAGTGTAGAAATTTCCTaGCTGAGTTCTTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: VHNCWNILCESCTRAGVRSVEIS*LSSSDF
Trigger: AAAATCCGAAGAACTCAGTCAGGAAATTTCTACACT...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAAGTGTAGAAATTTCCTaGCTGAGTTCTTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLSVEIS*LSSSDF
Trigger: AAAATCCGAAGAACTCAGTCAGGAAATTTCTACACT...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATAGTGTAGAAATTTCCTaGCTGAGTTCTTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYSVEIS*LSSSDF
Trigger: AAAATCCGAAGAACTCAGTCAGGAAATTTCTACACT...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTGATGTAGTTGGCTGGTaGCTTTTAAGAAGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVDVVGW*LLRRVN
Trigger: ATTTACTCTTCTTAAAAGTCACCAGCCAACTACATC...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGGATGTAGTTGGCTGGTaGCTTTTAAGAAGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLDVVGW*LLRRVN
Trigger: ATTTACTCTTCTTAAAAGTCACCAGCCAACTACATC...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCGATGTAGTTGGCTGGTaGCTTTTAAGAAGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: PLISAKTVVHGPKALELFDVVGW*LLRRVN
Trigger: ATTTACTCTTCTTAAAAGTCACCAGCCAACTACATC...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGACTTTGATTTTGAGGTaGCTGAGCTCTTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMTLILR*LSSCSN
Trigger: GTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGT...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCCTCACTGTGGAGAGCTaGTGTCCGGGAGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESLTVES*CPGELA
Trigger: AGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAG...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCCACACACACGCTCTGTaGTCCACTGGGCAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESHTHAL*STGQRG
Trigger: CCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTG...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCAGACGCTCAATTTCTaGATCTTTCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: HVKVSLSVFPPESTFGNGQTLNF*IFQGHL
Trigger: CAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTG...ACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTTGCTGGAATATTCTCTaGGAGTCATGCACACGTGCG +
Preference number: 4 (lower is better)
Translates to: HVKVSLSVFPPESTFGNGCWNIL*ESCTRA
Trigger: CGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA...ACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATAAGATACCCACTGCCTaGCAAAGATCACATACTGAG +
Preference number: 4 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHKIPTA*QRSHTE
Trigger: CTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTT...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCCTCTCCGAAGGCCCTTaGGTGACCATCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESLSEGP*VTITIS
Trigger: GGAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAG...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGGATGTAGTTGGCTGGTaGCTTTTAAGAAGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMDVVGW*LLRRVN
Trigger: ATTTACTCTTCTTAAAAGTCACCAGCCAACTACATC...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp CATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTATTCCATTGTCACTGTaGCAGAAGTCCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: HVKVSLSVFPPESTFGNGIPLSL*QKSLLL
Trigger: GAGCAACAGGGACTTCTGCCACAGTGACAATGGAAT...ACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR GCA 90 bp CATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTTTCCTGTGGAGTGGGTaGTTAATTCCTAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: HVKVSLSVFPPESTFGNGFLWSG*LIPSSF
Trigger: AAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAA...ACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCAGAAAGGGCTGTCCTTaGGTTCTAACACCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESRKGCP*VLTPGR
Trigger: CCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCT...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGG +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESIRSSF*VSRDVR
Trigger: CCGCACATCTCTTGAGACCCAGAAGCTCGATCTGAT...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCGAGGAGCGTCTTTTGTaGGGGGATGTTGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESEERLL*GDVEKH
Trigger: ATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTC...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCAGGGTTCAAAGAGACTaGCCCAGGGGTACACAATTG +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESRVQRD*PRGTQL
Trigger: CAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCT...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCTTTACCTTCCGGTACTaGTTTAACAGCCCCGTAAGC +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESFTFRY*FNSPVS
Trigger: GCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAA...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR TCA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCGGTGCAGTTATATGGTaGCACACACAGTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: SRITRHVKVSLSVFPPESGAVIW*HTQCYC
Trigger: ACAGTAACACTGTGTGTGTCACCATATAACTGCACC...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS CCA 90 bp ACCCCCTTGGGCACCCGCTCCCTCTCGGGCACCGAAGAAGCCTGCTaGGACCCGTCCACCAGGGTTCCTGTTCCCGGGGGACCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TPLGTRSLSGTEEAC*DPSTRVPVPGGPAW
Trigger: CCAGGCCGGTCCCCCGGGAACAGGAACCCTGGTGGACGGGTCCCAGCAGGCTTCTTCGGTGCCCGAGAGGGAGCGGGTGCCCAAGGGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS TCA 90 bp GCTCAGGTGTGCGGGCCGCTCCCGTGTCCCTCCCACCTTCAAACATaGGAGCCCAGAAGCGAGCGACGGGCCACTGGCCCACCGACCAAC +
Preference number: 5 (lower is better)
Translates to: AQVCGPLPCPSHLQT*EPRSERRATGPPTN
Trigger: GTTGGTCGGTGGGCCAGTGGCCCGTCGCTCGCTTCTGGGCTCTCATGTTTGAAGGTGGGAGGGACACGGGAGCGGCCCGCACACCTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528947.5
ENST00000684123.1
CDS GCA 90 bp CTTGCAGTAACTCAGGTGACCCCTCCCAACAGGCACAGTCCTGGCTaGAGGGCTGGGGCTCGGCCACACCGTCGCTGGCCGCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: LAVTQVTPPNRHSPG*RAGARPHRRWPPPP
Trigger: AGGAGGTGGCGGCCAGCGACGGTGTGGCCGAGCCCCAGCCCTGCAGCCAGGACTGTGCCTGTTGGGAGGGGTCACCTGAGTTACTGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS GCA 90 bp CCACAGCTCTGCTTCATGCCTGTCAGCAGCCTGTCTGAGACACCCTaGCAGCCCGGACTGGGCTTGCAGAGGGGGCTGTGTGCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PQLCFMPVSSLSETP*QPGLGLQRGLCARS
Trigger: GGAGCGGGCACACAGCCCCCTCTGCAAGCCCAGTCCGGGCTGGCAGGGTGTCTCAGACAGGCTGCTGACAGGCATGAAGCAGAGCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS CCA 90 bp CTCCCACCTTCAAACATGAGAGCCCAGAAGCGAGCGACGGGCCACTaGCCCACCGACCAACTGCCGGACCAAGCGCCCGACCAACCAGCG +
Preference number: 5 (lower is better)
Translates to: LPPSNMRAQKRATGH*PTDQLPDQAPDQPA
Trigger: CGCTGGTTGGTCGGGCGCTTGGTCCGGCAGTTGGTCGGTGGGCCAGTGGCCCGTCGCTCGCTTCTGGGCTCTCATGTTTGAAGGTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528947.5
ENST00000684123.1
CDS CCA 90 bp CTCTCAGCCTCAGCAGGCTGCTCCCCGTGGCGTCAGGCTGGCAGATaGTGGGAGGAGATTTGGCAGCCTCTCCATTGGGCGTGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LSASAGCSPWRQAGR*WEEIWQPLHWAWLL
Trigger: CAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
CDS CCA 90 bp CGGCCACGATTCAGCCTCAGCAGGCTGCTCCCCGTGGCGTCAGGCTaGCAGATGGTGGGAGGAGATTTGGCAGCCTCTCCATTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: RPRFSLSRLLPVASG*QMVGGDLAASPLGV
Trigger: CACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAATCGTGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000530081.1
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 90 bp GACACCTGTCCCACAGCTCTGCTTCATGCCTGTCAGCAGCCTGTCTaGGACACCCTGCCAGCCCGGACTGGGCTTGCAGAGGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: DTCPTALLHACQQPV*DTLPARTGLAEGAV
Trigger: CACAGCCCCCTCTGCAAGCCCAGTCCGGGCTGGCAGGGTGTCTCAGACAGGCTGCTGACAGGCATGAAGCAGAGCTGTGGGACAGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS GCA 90 bp CTGTCCCTTGGAGTCCCTGGTCCTAGAGAGTCTTGGCCCTGCGGTTaGCCGGAGCCCACCTCGTCGAAACTCTGCCATCCCCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: LSLGVPGPRESWPCG*PEPTSSKLCHPQRV
Trigger: GACACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp ACACATGGACCCTGGGGCCACCCCTGGACACCTGTCCCACAGCTCTaGTTCATGCCTGTCAGCAGCCTGTCTGAGACACCCTGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: THGPWGHPWTPVPQL*FMPVSSLSETPCQP
Trigger: GGGCTGGCAGGGTGTCTCAGACAGGCTGCTGACAGGCATGAAGCAGAGCTGTGGGACAGGTGTCCAGGGGTGGCCCCAGGGTCCATGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530582.5
ENST00000684123.1
CDS CCA 90 bp CCGCCCCCAGGCAGGATGGGAAAGCAGACAGCGAGGGCTGTAGCCTaGGCACACAAAGGGGCTTCAGCACATGAGCTGCTTCGGCACCCA +
Preference number: 5 (lower is better)
Translates to: PPPGRMGKQTARAVA*AHKGASAHELLRHP
Trigger: TGGGTGCCGAAGCAGCTCATGTGCTGAAGCCCCTTTGTGTGCCCAGGCTACAGCCCTCGCTGTCTGCTTTCCCATCCTGCCTGGGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS CCA 90 bp TCATGCCTGTCAGCAGCCTGTCTGAGACACCCTGCCAGCCCGGACTaGGCTTGCAGAGGGGGCTGTGTGCCCGCTCCCCACAGAAGCAAA +
Preference number: 5 (lower is better)
Translates to: SCLSAACLRHPASPD*ACRGGCVPAPHRSK
Trigger: TTTGCTTCTGTGGGGAGCGGGCACACAGCCCCCTCTGCAAGCCCAGTCCGGGCTGGCAGGGTGTCTCAGACAGGCTGCTGACAGGCATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS CCA 90 bp GATTCAGCCTCAGCAGGCTGCTCCCCGTGGCGTCAGGCTGGCAGATaGTGGGAGGAGATTTGGCAGCCTCTCCATTGGGCGTGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DSASAGCSPWRQAGR*WEEIWQPLHWAWLL
Trigger: CAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000530081.1
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 90 bp GACAGCGAGGGCTGTAGCCTGGGCACACAAAGGGGCTTCAGCACATaGGCTGCTTCGGCACCCAAGGGCCTTCAGTGCACCCGCCCTTAC +
Preference number: 5 (lower is better)
Translates to: DSEGCSLGTQRGFST*AASAPKGLQCTRPY
Trigger: GTAAGGGCGGGTGCACTGAAGGCCCTTGGGTGCCGAAGCAGCTCATGTGCTGAAGCCCCTTTGTGTGCCCAGGCTACAGCCCTCGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS TCA 90 bp CGGCCACACCGTCGCTGGCCGCCACCTCCTCAGGGTGGTCCCTACTaGGTAACAGGCGCTCTTGAATCTGCCTGTGGATGTCCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RPHRRWPPPPQGGPY*VTGALESACGCPAA
Trigger: TGCAGCTGGACATCCACAGGCAGATTCAAGAGCGCCTGTTACTCAGTAGGGACCACCCTGAGGAGGTGGCGGCCAGCGACGGTGTGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS CCA 90 bp GGCTGCTCCCCGTGGCGTCAGGCTGGCAGATGGTGGGAGGAGATTTaGCAGCCTCTCCATTGGGCGTGGCTCCTGAAAGCTTCCCAGGTA +
Preference number: 5 (lower is better)
Translates to: GCSPWRQAGRWWEEI*QPLHWAWLLKASQV
Trigger: TACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 90 bp TCAGCCTCAGCAGGCTGCTCCCCGTGGCGTCAGGCTGGCAGATGGTaGGAGGAGATTTGGCAGCCTCTCCATTGGGCGTGGCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SASAGCSPWRQAGRW*EEIWQPLHWAWLLK
Trigger: TTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 90 bp TCTGTGTCTCTCAGCCTCAGCAGGCTGCTCCCCGTGGCGTCAGGCTaGCAGATGGTGGGAGGAGATTTGGCAGCCTCTCCATTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: SVSLSLSRLLPVASG*QMVGGDLAASPLGV
Trigger: CACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAGAGACACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
CDS TCA 90 bp GCAGCTGTTGGGCCAGGGATCTGGCTCAGGAGGGCTGCTCTCTCCTaGGGAAGCTCCAGCATCTCCAAGGCCAGCCTCAAGTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: AAVGPGIWLRRAALS*GSSSISKASLKSSM
Trigger: CATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTGAGCCAGATCCCTGGCCCAACAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000524548.5
ENST00000526873.5
ENST00000527790.5
ENST00000528947.5
ENST00000684123.1
CDS GCA 90 bp GGGACTGGAGCTGCAGCTGTTTTCCTCCTTTCAGGGCAGGTCACATaGAGGCTCTCCAGGTGGCCCCTCCAGCACTCCCTAGATGCCACC +
Preference number: 5 (lower is better)
Translates to: GTGAAAVFLLSGQVT*RLSRWPLQHSLDAT
Trigger: GGTGGCATCTAGGGAGTGCTGGAGGGGCCACCTGGAGAGCCTGCATGTGACCTGCCCTGAAAGGAGGAAAACAGCTGCAGCTCCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533792.5
CDS CCA 90 bp GAGCGCAGCATGGTTGAAGACACACATGGACCCTGGGGCCACCCCTaGACACCTGTCCCACAGCTCTGCTTCATGCCTGTCAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: ERSMVEDTHGPWGHP*TPVPQLCFMPVSSL
Trigger: CAGGCTGCTGACAGGCATGAAGCAGAGCTGTGGGACAGGTGTCCAGGGGTGGCCCCAGGGTCCATGTGTGTCTTCAACCATGCTGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530582.5
ENST00000684123.1
CDS CCA 90 bp GCCTGCGGTGAAGAGCGCAGCATGGTTGAAGACACACATGGACCCTaGGGCCACCCCTGGACACCTGTCCCACAGCTCTGCTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: ACGEERSMVEDTHGP*GHPWTPVPQLCFMP
Trigger: AGGCATGAAGCAGAGCTGTGGGACAGGTGTCCAGGGGTGGCCCCAGGGTCCATGTGTGTCTTCAACCATGCTGCGCTCTTCACCGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530582.5
ENST00000684123.1
CDS-3UTR CAA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACGTCTTGGCCCTGCGGTaGCCCGGAGCCCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNVLALR*PGAHLV
Trigger: GACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGAC...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp CCTGAGGAAGCTCCAGCATCTCCAAGGCCAGCCTCAAGTCCTCGATaGGATGGAGCACCGGGAAGGGGTTCATGTAGGAGGCCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: PEEAPASPRPASSPR*DGAPGRGSCRRPGK
Trigger: CTTCCCCGGCCTCCTACATGAACCCCTTCCCGGTGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000526046.1
ENST00000526873.5
ENST00000527790.5
ENST00000528947.5
ENST00000684123.1
CDS GCA 90 bp ACTTTTCTGTCCCTTGGAGTCCCTGGTCCTAGAGAGTCTTGGCCCTaGGGTTGCCCGGAGCCCACCTCGTCGAAACTCTGCCATCCCCAG +
Preference number: 5 (lower is better)
Translates to: TFLSLGVPGPRESWP*GCPEPTSSKLCHPQ
Trigger: CTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp ACTGAGCCAGGCCAAAGTCCTCCAGCCATGCACACACACGCTCTGTaGTCCACTGGGCAAAGGGGGCATTGGCGTCACTGGGAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: TEPGQSPPAMHTHAL*STGQRGHWRHWEAG
Trigger: TCCTGCTTCCCAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532112.1
CDS CCA 90 bp GGCGTCACTTTTCTGTCCCTTGGAGTCCCTGGTCCTAGAGAGTCTTaGCCCTGCGGTTGCCCGGAGCCCACCTCGTCGAAACTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: GVTFLSLGVPGPRES*PCGCPEPTSSKLCH
Trigger: ATGGCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS-3UTR CAA 90 bp AAGGCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTGCCTGAGAGCTGAGGTCTTGGCCCTGCGGTaGCCCGGAGCCCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: KALELFPQLKCRGCLRAEVLALR*PGAHLV
Trigger: GACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGAC...CTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCGTCTTGGCCCTGCGGTaGCCCGGAGCCCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSVLALR*PGAHLV
Trigger: GACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGAC...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp GGCTTCCACACTCAAGCATGGTGCAGCAGAGGAAACAGGTGGTTCTaGGGCTCTCCGCCAGTTTTTCCTGGGTACGGGGCCGAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: GFHTQAWCSRGNRWF*GSPPVFPGYGAEAP
Trigger: AGGAGCCTCGGCCCCGTACCCAGGAAAAACTGGCGGAGAGCCTCAGAACCACCTGTTTCCTCTGCTGCACCATGCTTGAGTGTGGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS GCA 90 bp CCAGAGCAGAAACCCTTCGGAGCATCCCGACTTCCTCGGCCCGCGTaGAATCCAGGCAAAATTGAGGTTGTCTCTGAGCCGCCCTCCCTA +
Preference number: 5 (lower is better)
Translates to: PEQKPFGASRLPRPA*NPGKIEVVSEPPSL
Trigger: TAGGGAGGGCGGCTCAGAGACAACCTCAATTTTGCCTGGATTGCACGCGGGCCGAGGAAGTCGGGATGCTCCGAAGGGTTTCTGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526873.5
CDS CCA 90 bp CCCCACAGGATCAGATCTGACAGTGGAGAGGAGAAGCCGCACACCTaGCCTGCGAAGACAGCTCCTCAGAGCAATGGCAGAGCCCACAGA +
Preference number: 5 (lower is better)
Translates to: PHRIRSDSGEEKPHT*PAKTAPQSNGRAHR
Trigger: TCTGTGGGCTCTGCCATTGCTCTGAGGAGCTGTCTTCGCAGGCCAGGTGTGCGGCTTCTCCTCTCCACTGTCAGATCTGATCCTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526046.1
CDS-3UTR CAA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCCAGGGCCACCTGTTCTaGCAGCTGGGCGACTTCAGC +
Preference number: 5 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGQGHLF*QLGDFS
Trigger: GCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCTG...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTGTCTTGGCCCTGCGGTaGCCCGGAGCCCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: PPSGFKETGPGVHNCWNIVLALR*PGAHLV
Trigger: GACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGAC...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS GCA 90 bp GAGAGCTGCTGTCCGGGAGAGCTGGCTGTGCAGACGCTCAATTTCTaGATCTTTCAGGGCCACCTGTTCTTGCAGCTGGGCGACTTCAGC +
Preference number: 5 (lower is better)
Translates to: ESCCPGELAVQTLNF*IFQGHLFLQLGDFS
Trigger: GCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 90 bp AGGCCAAAGTCCTCCAGCCATGCACACACACGCTCTGTGCTCCACTaGGCAAAGGGGGCATTGGCGTCACTGGGAAGCAGGAAAACAGCA +
Preference number: 5 (lower is better)
Translates to: RPKSSSHAHTRSVLH*AKGALASLGSRKTA
Trigger: TGCTGTTTTCCTGCTTCCCAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532112.1
CDS CCA 90 bp AGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTaGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: RGCLRAEPRGSVHGL*TCIEVHVFPLVLVQ
Trigger: CTGGACCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534552.1
CDS-3UTR CAA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCTCACTTTTCTGTCCCTaGGAGTCCCTGGTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTSLFCP*ESLVLE
Trigger: CTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGA...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp CACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTaGCAAGGGCATCAGCTAATCTGTCCCACCTGGTCCAGCCCATCC +
Preference number: 5 (lower is better)
Translates to: HTQCYCELSGCTEGR*QGHQLICPTWSSPS
Trigger: GGATGGGCTGGACCAGGTGGGACAGATTAGCTGATGCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000533792.5
ENST00000684215.1
CDS GCA 90 bp GGCCCCCAGCCGAGCGCTCCCTCACTGCACCAGGTCTGGAGAAAGTaGTGTCTGGGAATCTGTCTAACCAGCTCAGCAGGTTATTCATCT +
Preference number: 5 (lower is better)
Translates to: GPQPSAPSLHQVWRK*CLGICLTSSAGYSS
Trigger: AGATGAATAACCTGCTGAGCTGGTTAGACAGATTCCCAGACAGCACTTTCTCCAGACCTGGTGCAGTGAGGGAGCGCTCGGCTGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS GCA 90 bp GTCACCCGACAAACATCAGCAACATCTACTCCCTGCCAGGCCCTGTaGCAGGTCTGGAGCAAGCACTCCCCACATCTGGGAGACAGACAA +
Preference number: 5 (lower is better)
Translates to: VTRQTSATSTPCQAL*QVWSKHSPHLGDRQ
Trigger: TTGTCTGTCTCCCAGATGTGGGGAGTGCTTGCTCCAGACCTGGCACAGGGCCTGGCAGGGAGTAGATGTTGCTGATGTTTGTCGGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS GCA 90 bp TGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTTCCACTGGTGCTGGTCCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: CLRAEPRGSVHGLWT*IEVHVFPLVLVQPI
Trigger: GATGGGCTGGACCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534552.1
CDS CCA 90 bp CCTACGCTCTCAGCCACGAAGAAAGTCATCTCCAGTCATCAGAGTTaGGGGCAGGCAGGCGAGAGTCATTCAGCAGCTGGTCCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: PTLSATKKVISSHQS*GQAGESHSAAGPGS
Trigger: TGAGCCAGGACCAGCTGCTGAATGACTCTCGCCTGCCTGCCCCCAACTCTGATGACTGGAGATGACTTTCTTCGTGGCTGAGAGCGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS-3UTR CAA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGCAGGGCCACCTGTTCTaGCAGCTGGGCGACTTCAGC +
Preference number: 5 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVQGHLF*QLGDFS
Trigger: GCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCTG...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACATGGTGGGAGGAGATTaGGCAGCCTCTCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHMVGGD*AASPLG
Trigger: GCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCAT...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp CCTTGGCCGGACTTTGGCTGTGGTGGTCAGTGGTGTGTAAGCTGGTaGGGCCATTTTCTCTCGCTTCTCCTGTTCAGCCTCCGGACCAAT +
Preference number: 5 (lower is better)
Translates to: PWPDFGCGGQWCVSW*GHFLSLLLFSLRTN
Trigger: ATTGGTCCGGAGGCTGAACAGGAGAAGCGAGAGAAAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000534552.1
ENST00000684123.1
ENST00000684215.1
CDS TCA 90 bp GCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTaGGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCATCAGCT +
Preference number: 5 (lower is better)
Translates to: AGVRCSYMVTHTVLL*ALRVHRGQVTRASA
Trigger: AGCTGATGCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000533792.5
ENST00000684215.1
CDS TCA 90 bp CATTTGCACCAAGGCAGGTGGGCTAGGCCAGAGAGCCACTCACAATaGGGCCTCCATGGACTCCACTCCCTCGAAGATTGGGTGCATACT +
Preference number: 5 (lower is better)
Translates to: HLHQGRWARPESHSQ*GLHGLHSLEDWVHT
Trigger: AGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTGTGAGTGGCTCTCTGGCCTAGCCCACCTGCCTTGGTGCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529664.1
CDS CCA 90 bp GCCATGCACACACACGCTCTGTGCTCCACTGGGCAAAGGGGGCATTaGCGTCACTGGGAAGCAGGAAAACAGCATATTCCTGTTAGTGGG +
Preference number: 5 (lower is better)
Translates to: AMHTHALCSTGQRGH*RHWEAGKQHIPVSG
Trigger: CCCACTAACAGGAATATGCTGTTTTCCTGCTTCCCAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532112.1
CDS-3UTR CAA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCTCCCTGGGCTTCTACTaGGTCTGTGAGGACACTCAC +
Preference number: 5 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGSLGFY*VCEDTH
Trigger: GTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGGA...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGCAGGGCCACCTGTTCTaGCAGCTGGGCGACTTCAGC +
Preference number: 5 (lower is better)
Translates to: NILCESCTRAGVRCSYMVQGHLF*QLGDFS
Trigger: GCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCTG...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCGTGGATGAGAGGTCATaGACCACAGCAGTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGVDERS*TTAVSS
Trigger: GGACGACACTGCTGTGGTCAATGACCTCTCATCCAC...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACACACAGTGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTGACAAGGGCATCAAGGCATTGAACTaGGTGGTCAGGTGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: THSVTVSSQGAQRAGDKGIKALN*VVRWRL
Trigger: CAGGCGCCACCTGACCACCAAGTTCAATGCCTTGAT...GCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTCCTGAGTCCACCTTaGGCAATGGTCCCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LLLIPLISAKTVVHGPKALLSPP*AMVPKA
Trigger: GGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAG...TGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGTAGGGGGTGCCTGAGAGCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCCACAACACAATTCCATaGTCACTGTGGCAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: CRGCLRAEPRGSVHGLWTHNTIP*SLWQKS
Trigger: GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTG...GGTCCAGAGACCATGGACACTCCCACGAGGCTCAGCTCTCAGGCACCCCCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp AAGGTGTGGCCAGAAGATACCCACTGCCTGGCAAAGATCACATACTaGGCCAGGCCAAAGTCCTCCAGCCATGCACACACACGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: KVWPEDTHCLAKITY*ARPKSSSHAHTRSV
Trigger: CACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532112.1
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp TTCCCTACCCCCTCTGCCACTCTCAACGTTCAGGTTGGTTTCACCTaGTGTATAAACACCGTACAACTGAGCAGCCAATCCCGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: FPTPSATLNVQVGFT*CINTVQLSSQSRPQ
Trigger: CTGGGGGCGGGATTGGCTGCTCAGTTGTACGGTGTTTATACAGCAGGTGAAACCAACCTGAACGTTGAGAGTGGCAGAGGGGGTAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS GCA 90 bp CCATTTGATATGGTCACCCGACAAACATCAGCAACATCTACTCCCTaGCAGGCCCTGTGCCAGGTCTGGAGCAAGCACTCCCCACATCTG +
Preference number: 5 (lower is better)
Translates to: PFDMVTRQTSATSTP*QALCQVWSKHSPHL
Trigger: CAGATGTGGGGAGTGCTTGCTCCAGACCTGGCACAGGGCCTGGCAGGGAGTAGATGTTGCTGATGTTTGTCGGGTGACCATATCAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS CCA 90 bp GGAGAAGCCGCACACCTGGCCTGCGAAGACAGCTCCTCAGAGCAATaGCAGAGCCCACAGACACTGGCTTTATATCACAATGAGGGACAA +
Preference number: 5 (lower is better)
Translates to: GEAAHLACEDSSSEQ*QSPQTLALYHNEGQ
Trigger: TTGTCCCTCATTGTGATATAAAGCCAGTGTCTGTGGGCTCTGCCATTGCTCTGAGGAGCTGTCTTCGCAGGCCAGGTGTGCGGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526046.1
CDS-3UTR CAA 90 bp AAGGCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTGCCTGAGAGCTGAGATGGTGGGAGGAGATTaGGCAGCCTCTCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: KALELFPQLKCRGCLRAEMVGGD*AASPLG
Trigger: GCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCAT...CTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGAGCATGGTGGGAGGAGATTaGGCAGCCTCTCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: TCGGEVQLYGDTHSVTVSMVGGD*AASPLG
Trigger: GCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCAT...GCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGTGCAGGCAGTGGGGGTaGAACTTGTTGACATGCAGC +
Preference number: 5 (lower is better)
Translates to: LIPLISAKTVVHGPKALECRQWG*NLLTCS
Trigger: GCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCA...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACCACTCCCTCGAAGATaGGGTGCATACTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTPLPRR*GAYSAR
Trigger: CCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGG...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGCCACTCCCTCGAAGATaGGGTGCATACTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VHNCWNILCESCTRAGVRPLPRR*GAYSAR
Trigger: CCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGG...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AAGGCACTTGAGCTTTTCCCTCAACTGAAGTGTAGGGGGTGCCTGAGAGCTGAGCCACTCCCTCGAAGATaGGGTGCATACTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: KALELFPQLKCRGCLRAEPLPRR*GAYSAR
Trigger: CCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGG...CTCAGCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCCACTCCCTCGAAGATaGGGTGCATACTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVPLPRR*GAYSAR
Trigger: CCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGG...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGTTCCTTGGCCGGACTTaGGCTGTGGTGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVFLGRT*AVVVSG
Trigger: ACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAA...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCGTCACTGGGCTCCATaGGGCAAATGTAGTCCGTCG +
Preference number: 5 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLRHWAP*GKCSPS
Trigger: CGACGGACTACATTTGCCCAATGGAGCCCAGTGACG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGCGTCACTGGGCTCCATaGGGCAAATGTAGTCCGTCG +
Preference number: 5 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVRHWAP*GKCSPS
Trigger: CGACGGACTACATTTGCCCAATGGAGCCCAGTGACG...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp ACTGAGGACCTGATTCAGTGCCCGATGATGTGGATGAGAGGTCATTaGCCACAGCAGTGTCGTCCCAGCCACTTTCTGTGTCTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TEDLIQCPMMWMRGH*PQQCRPSHFLCLSA
Trigger: GGCTGAGAGACACAGAAAGTGGCTGGGACGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
CDS GCA 90 bp TTGGGCGTGGCTCCTGAAAGCTTCCCAGGTAAAGTGGGATATTTGTaGTCCGCCAAGAAAGGGCTGTCCTTGGGTTCTAACACCGGGAAG +
Preference number: 5 (lower is better)
Translates to: LGVAPESFPGKVGYL*SAKKGLSLGSNTGK
Trigger: CTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532381.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp ACAAACACACACACACACACACACACACACACACACGCACATACATaGACGCACACGCACCAGGACTGGGATTCAGAGCCCTGCGGAGAA +
Preference number: 5 (lower is better)
Translates to: TNTHTHTHTHTHAHT*THTHQDWDSEPCGE
Trigger: TTCTCCGCAGGGCTCTGAATCCCAGTCCTGGTGCGTGTGCGTGCATGTATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000532926.5
ENST00000684215.1
CDS GCA 90 bp AATGGAGGTGGCCCCACTGTAGGAGAGCTACATCTTGGAGGCATCTaGACCAGAGACAGAAGAGTCACGGTAGAGGACAGTCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: NGGGPTVGELHLGGI*TRDRRVTVEDSLFG
Trigger: CCCAAACAGACTGTCCTCTACCGTGACTCTTCTGTCTCTGGTGCAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACCTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS CCA 90 bp CAGCCTCTCCATTGGGCGTGGCTCCTGAAAGCTTCCCAGGTAAAGTaGGATATTTGTGCTCCGCCAAGAAAGGGCTGTCCTTGGGTTCTA +
Preference number: 5 (lower is better)
Translates to: QPLHWAWLLKASQVK*DICAPPRKGCPWVL
Trigger: TAGAACCCAAGGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532381.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 90 bp CTCATTCAGCAAATCTACACATGTGCCGAATGGCCATACACGCTGTaGAGAACAGGGGCACGGCTTCCACACTCAAGCATGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LIQQIYTCAEWPYTL*RTGARLPHSSMVQQ
Trigger: CTGCTGCACCATGCTTGAGTGTGGAAGCCGTGCCCCTGTTCTCCACAGCGTGTATGGCCATTCGGCACATGTGTAGATTTGCTGAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS CCA 90 bp GGTGGTTTACCTGGGACTGGCTGGAATTCCAAGTACTTGAGGGAATaGCTGAAAAAGGAGCTGAGGCCCCCTGAGGTGTTACTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GGLPGTGWNSKYLRE*LKKELRPPEVLLLL
Trigger: CAGCAGGAGTAACACCTCAGGGGGCCTCAGCTCCTTTTTCAGCCATTCCCTCAAGTACTTGGAATTCCAGCCAGTCCCAGGTAAACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529575.5
CDS CCA 90 bp TTTCTGTGGCAATGGAGGTGGCCCCACTGTAGGAGAGCTACATCTTaGAGGCATCTGCACCAGAGACAGAAGAGTCACGGTAGAGGACAG +
Preference number: 5 (lower is better)
Translates to: FLWQWRWPHCRRATS*RHLHQRQKSHGRGQ
Trigger: CTGTCCTCTACCGTGACTCTTCTGTCTCTGGTGCAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACCTCCATTGCCACAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS-3UTR CAA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTTATGTAGGCAGCTGTaGGGCCAGGGATCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: VHNCWNILCESCTRAGVRLCRQL*GQGSGS
Trigger: TGAGCCAGATCCCTGGCCCAACAGCTGCCTACATAA...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR CAA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCTCCCTGGGCTTCTACTaGGTCTGTGAGGACACTCAC +
Preference number: 5 (lower is better)
Translates to: PLISAKTVVHGPKALELFSLGFY*VCEDTH
Trigger: GTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGGA...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCTCCCTGGGCTTCTACTaGGTCTGTGAGGACACTCAC +
Preference number: 5 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVSLGFY*VCEDTH
Trigger: GTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGGA...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR CAA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACATCTCTCCGAAGGCCCTaGAGTGACCATCACAATCTC +
Preference number: 5 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTSLRRP*SDHHNL
Trigger: GAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAGA...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGATGGTGGGAGGAGATTaGGCAGCCTCTCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: QGSKRLAQGYTIAGIFSAMVGGD*AASPLG
Trigger: GCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCAT...CGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTGTGGATGAGAGGTCATaGACCACAGCAGTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVVDERS*TTAVSS
Trigger: GGACGACACTGCTGTGGTCAATGACCTCTCATCCAC...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACAGTGGATGAGAGGTCATaGACCACAGCAGTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTVDERS*TTAVSS
Trigger: GGACGACACTGCTGTGGTCAATGACCTCTCATCCAC...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATGTGGATGAGAGGTCATaGACCACAGCAGTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYVDERS*TTAVSS
Trigger: GGACGACACTGCTGTGGTCAATGACCTCTCATCCAC...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACATCACTTTTCTGTCCCTaGGAGTCCCTGGTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTSLFCP*ESLVLE
Trigger: CTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGA...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATGCAGGCAGTGGGGGTaGAACTTGTTGACATGCAGC +
Preference number: 5 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLCRQWG*NLLTCS
Trigger: GCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCA...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATCAAGGCATTGAACTaGGTGGTCAGGTGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: CWNILCESCTRAGVRCSYIKALN*VVRWRL
Trigger: CAGGCGCCACCTGACCACCAAGTTCAATGCCTTGAT...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACAATCAAGGCATTGAACTaGGTGGTCAGGTGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTIKALN*VVRWRL
Trigger: CAGGCGCCACCTGACCACCAAGTTCAATGCCTTGAT...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGATCAAGGCATTGAACTaGGTGGTCAGGTGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLIKALN*VVRWRL
Trigger: CAGGCGCCACCTGACCACCAAGTTCAATGCCTTGAT...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATTTCCTTGGCCGGACTTaGGCTGTGGTGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYFLGRT*AVVVSG
Trigger: ACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAA...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGTTCCTTGGCCGGACTTaGGCTGTGGTGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: QGSKRLAQGYTIAGIFSAFLGRT*AVVVSG
Trigger: ACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAA...CGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTCACTGGGCTCCATaGGGCAAATGTAGTCCGTCG +
Preference number: 5 (lower is better)
Translates to: ETGPGVHNCWNILCESCTRHWAP*GKCSPS
Trigger: CGACGGACTACATTTGCCCAATGGAGCCCAGTGACG...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACCCCAGGGGTACACAATaGCTGGAATATTCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHPRGTQ*LEYSLR
Trigger: TCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGG...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACTCCTGAGTCCACCTTaGGCAATGGTCCCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: ETGPGVHNCWNILCESCTLLSPP*AMVPKA
Trigger: GGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAG...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCCTCAACCTGGCTTCACATTCTTaGACCTCAGCTCCAACAGGC +
Preference number: 5 (lower is better)
Translates to: SQPRLWSTGLRHLSFSLNLASHS*TSAPTG
Trigger: GCCTGTTGGAGCTGAGGTCAAAGAATGTGAAGCCAG...GTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS TCA 90 bp ACTGGGACCTCTTTGGTGAGGCTGTCTCTCAGGATCTTCTCTGGATaGCATCCAAGCCACCACACTTCCTCATTTCCCCTCTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: TGTSLVRLSLRIFSG*HPSHHTSSFPLWLC
Trigger: GCAAAGCCAGAGGGGAAATGAGGAAGTGTGGTGGCTTGGATGTCATCCAGAGAAGATCCTGAGAGACAGCCTCACCAAAGAGGTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529664.1
CDS TCA 90 bp GCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTaGGCTCTGCTTTTCTCTGCTTCTCCTCCTGCTCTCTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: AGVRCSYMVTHTVLL*ALLFSASPPALSAP
Trigger: AGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGCTCACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS TCA 90 bp ACTGAGGACCTGATTCAGTGCCCGATGATGTGGATGAGAGGTCATTaGCCACAGCAGTGTCGTCCCAGCCACTTTCTGTGTCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: TEDLIQCPMMWMRGH*PQQCRPSHFLCLLE
Trigger: TTCCAGGAGACACAGAAAGTGGCTGGGACGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530081.1
CDS GCA 90 bp CTGAGCTCTTGCAGTAACTCCTCTGCTTTTCTCTGCTTCTCCTCCTaGTCTCTCTGCTCCTTCTCCATGCCAACCAGCTTGAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LSSCSNSSAFLCFSS*SLCSFSMPTSLSFS
Trigger: GCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000525597.5
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp CTGAGCTTAGGACAGTACACACTCACCCTTACCTCTGCTTTTCTCTaGTTCTCCTCCTGCTCTCTCTGCTCCTTCTCCATGCCAACCAGC +
Preference number: 5 (lower is better)
Translates to: LSLGQYTLTLTSAFL*FSSCSLCSFSMPTS
Trigger: GCTGGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGTAAGGGTGAGTGTGTACTGTCCTAAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530189.1
CDS GCA 90 bp CTCAAGAACTCCAAGCTGTGTTCAAATTTCCCCACTTCCCTGGCCTaGGTCCTTCAGCCTCTCCCTAGACAGTTTCAGACACACAGCGAC +
Preference number: 5 (lower is better)
Translates to: LKNSKLCSNFPTSLA*VLQPLPRQFQTHSD
Trigger: GTCGCTGTGTGTCTGAAACTGTCTAGGGAGAGGCTGAAGGACGCAGGCCAGGGAAGTGGGGAAATTTGAACACAGCTTGGAGTTCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532926.5
ENST00000684215.1
CDS GCA 90 bp TCCTGCAGCTCACTGATCACATTCAGAACCGACTCTGCTTTTCTCTaGTTCTCCTCCTGCTCTCTCTGCTCCTTCTCCATGCCAACCAGC +
Preference number: 5 (lower is better)
Translates to: SCSSLITFRTDSAFL*FSSCSLCSFSMPTS
Trigger: GCTGGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGTCGGTTCTGAATGTGATCAGTGAGCTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS-3UTR CAA 90 bp GAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTAATGATCCCGTCCATTaGCTCCAGGGCAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EYSLRVMHTCGGEVQLYGNDPVH*LQGSFQ
Trigger: CTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATT...ACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299492.9
CDS-3UTR CAA 90 bp CTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACTCTTCCACTTTGATTTaGAGGTGCCTGAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: LRVMHTCGGEVQLYGDTHSSTLI*RCLSSC
Trigger: GCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGA...GTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTTCTCTCCGAAGGCCCTaGAGTGACCATCACAATCTC +
Preference number: 5 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVSLRRP*SDHHNL
Trigger: GAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAGA...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATAAGAAAGGGCTGTCCTaGGGTTCTAACACCGGGAAG +
Preference number: 5 (lower is better)
Translates to: CWNILCESCTRAGVRCSYKKGLS*GSNTGK
Trigger: CTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTT...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATAAGAAAGGGCTGTCCTaGGGTTCTAACACCGGGAAG +
Preference number: 5 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYKKGLS*GSNTGK
Trigger: CTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTT...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTTTGGCAATGGTCCCCAAAGCCTGGCCCCTTAGAGATGCAGCTCCAGATCCTGGACTTCTCCTCCTGTTaGGTGTTGATGGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: LWQWSPKPGPLEMQLQILDFSSC*VLMAFT
Trigger: AGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTC...CAGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGGGGACCATTGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCTTCCTTGGCCGGACTTaGGCTGTGGTGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: SGFKETGPGVHNCWNILCFLGRT*AVVVSG
Trigger: ACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAA...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCGTCACTGGGCTCCATaGGGCAAATGTAGTCCGTCG +
Preference number: 5 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMRHWAP*GKCSPS
Trigger: CGACGGACTACATTTGCCCAATGGAGCCCAGTGACG...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCCGTCACTGGGCTCCATaGGGCAAATGTAGTCCGTCG +
Preference number: 5 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPRHWAP*GKCSPS
Trigger: CGACGGACTACATTTGCCCAATGGAGCCCAGTGACG...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CAA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCCCAGGGGTACACAATaGCTGGAATATTCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: LIPLISAKTVVHGPKALEPRGTQ*LEYSLR
Trigger: TCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGG...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp ACCACCTTGTTTTCACAGACCAGCAGAGAACTGGGACCTCTTTGGTaGGGCTGTCTCTCAGGATCTTCTCTGGATGACATCCAAGCCACC +
Preference number: 5 (lower is better)
Translates to: TTLFSQTSRELGPLW*GCLSGSSLDDIQAT
Trigger: GGTGGCTTGGATGTCATCCAGAGAAGATCCTGAGAGACAGCCTCACCAAAGAGGTCCCAGTTCTCTGCTGGTCTGTGAAAACAAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529664.1
CDS TCA 90 bp TCAGTGCACCCGCCCTTACCTGTTGAAGCATCTCTTCAGCAGCATTaGGTTTCACCTGGTGTCCTTCCAGACACACTTCCAGGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: SVHPPLPVEASLQQH*VSPGVLPDTLPGLE
Trigger: TTCGAGACCTGGAAGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGTAAGGGCGGGTGCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS GCA 90 bp TGCAGTAACTCCTCTGCTTTTCTCTGCTTCTCCTCCTGCTCTCTCTaGTCCTTCTCCATGCCAACCAGCTTGAGCTTCAGCTCAGACACT +
Preference number: 5 (lower is better)
Translates to: CSNSSAFLCFSSCSL*SFSMPTSLSFSSDT
Trigger: AGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000525597.5
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp ATTTTGAGGTGCCTGAGCTCTTGCAGTAACTCCTCTGCTTTTCTCTaGTTCTCCTCCTGCTCTCTCTGCTCCTTCTCCATGCCAACCAGC +
Preference number: 5 (lower is better)
Translates to: ILRCLSSCSNSSAFL*FSSCSLCSFSMPTS
Trigger: GCTGGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000525597.5
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp AAACTGGAGGAGTTGCTGTTTGCTCATTCAGCAAATCTACACATGTaGCGAATGGCCATACACGCTGTGGAGAACAGGGGCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KLEELLFAHSANLHM*RMAIHAVENRGTAS
Trigger: GGAAGCCGTGCCCCTGTTCTCCACAGCGTGTATGGCCATTCGGCACATGTGTAGATTTGCTGAATGAGCAAACAGCAACTCCTCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS GCA 90 bp CTTCCCAGGTCTGAGCTTAGGACAGTACACACTCACCCTTACCTCTaGTTTTCTCTGCTTCTCCTCCTGCTCTCTCTGCTCCTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LPRSELRTVHTHPYL*FSLLLLLLSLLLLH
Trigger: ATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGTAAGGGTGAGTGTGTACTGTCCTAAGCTCAGACCTGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530189.1
CDS GCA 90 bp GCTCTCAGTTTATTTGGGACTGGGGAGAAGACTAAAAATAAGTGCTaGTCTTGGAGGAGCTCACTGGTTCCCACACACAGCCTGACCCCC +
Preference number: 5 (lower is better)
Translates to: ALSLFGTGEKTKNKC*SWRSSLVPTHSLTP
Trigger: GGGGGTCAGGCTGTGTGTGGGAACCAGTGAGCTCCTCCAAGAGCAGCACTTATTTTTAGTCTTCTCCCCAGTCCCAAATAAACTGAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS CCA 90 bp AGGAGTTGCTGTTTGCTCATTCAGCAAATCTACACATGTGCCGAATaGCCATACACGCTGTGGAGAACAGGGGCACGGCTTCCACACTCA +
Preference number: 5 (lower is better)
Translates to: RSCCLLIQQIYTCAE*PYTLWRTGARLPHS
Trigger: TGAGTGTGGAAGCCGTGCCCCTGTTCTCCACAGCGTGTATGGCCATTCGGCACATGTGTAGATTTGCTGAATGAGCAAACAGCAACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS CCA 90 bp AGCTTGAGCTTCAGCTCAGACACTTCAGTCATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGGCTTAGCAGCTCTTTAGGCGCACTC +
Preference number: 5 (lower is better)
Translates to: SLSFSSDTSVIRSSF*VSRDVRLSSSLGAL
Trigger: GAGTGCGCCTAAAGAGCTGCTAAGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS-3UTR CAA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACATCCAACTCTTCCACTTaGATTTTGAGGTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTSNSST*ILRCLS
Trigger: GCTCAGGCACCTCAAAATCAAAGTGGAAGAGTTGGA...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGTTTGTAGCGTTCCACTaGCTGAAACCTCCCTCCGGT +
Preference number: 5 (lower is better)
Translates to: NILCESCTRAGVRCSYMVFVAFH*LKPPSG
Trigger: ACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAAA...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATTTTGTAGCGTTCCACTaGCTGAAACCTCCCTCCGGT +
Preference number: 5 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYFVAFH*LKPPSG
Trigger: ACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAAA...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTTTTGTAGCGTTCCACTaGCTGAAACCTCCCTCCGGT +
Preference number: 5 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTFVAFH*LKPPSG
Trigger: ACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAAA...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACATTTGTAGCGTTCCACTaGCTGAAACCTCCCTCCGGT +
Preference number: 5 (lower is better)
Translates to: ETGPGVHNCWNILCESCTFVAFH*LKPPSG
Trigger: ACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAAA...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTAGGTAAAGTGGGATATTaGTGCTCCGCCAAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLGKVGY*CSAKKG
Trigger: CCCTTTCTTGGCGGAGCACAAATATCCCACTTTACC...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGGGTAAAGTGGGATATTaGTGCTCCGCCAAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLGKVGY*CSAKKG
Trigger: CCCTTTCTTGGCGGAGCACAAATATCCCACTTTACC...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGGGTAAAGTGGGATATTaGTGCTCCGCCAAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVGKVGY*CSAKKG
Trigger: CCCTTTCTTGGCGGAGCACAAATATCCCACTTTACC...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTCACTTTTCTGTCCCTaGGAGTCCCTGGTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: PSGFKETGPGVHNCWNILSLFCP*ESLVLE
Trigger: CTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGA...GAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACAGACTTCTCCTCCTGTTaGGTGTTGATGGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: SLRVMHTCGGEVQLYGDTDFSSC*VLMAFT
Trigger: AGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTC...TGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGTGCAGGCAGTGGGGGTaGAACTTGTTGACATGCAGC +
Preference number: 5 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMCRQWG*NLLTCS
Trigger: GCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCA...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTTCCATCACCCTGTGGTaGGACCACTGTACAACTTCT +
Preference number: 5 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVSITLW*DHCTTS
Trigger: AGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGA...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGTCCATCACCCTGTGGTaGGACCACTGTACAACTTCT +
Preference number: 5 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVSITLW*DHCTTS
Trigger: AGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGA...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCATCAAGGCATTGAACTaGGTGGTCAGGTGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPIKALN*VVRWRL
Trigger: CAGGCGCCACCTGACCACCAAGTTCAATGCCTTGAT...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CAA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCTTCCTTGGCCGGACTTaGGCTGTGGTGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSFLGRT*AVVVSG
Trigger: ACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAA...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CAA 90 bp ACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCCCAGGGGTACACAATaGCTGGAATATTCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: TQLLEYSLRVMHTCGGEVPRGTQ*LEYSLR
Trigger: TCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGG...CACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTCCCAGGGGTACACAATaGCTGGAATATTCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVPRGTQ*LEYSLR
Trigger: TCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGG...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTCCTGAGTCCACCTTaGGCAATGGTCCCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSLLSPP*AMVPKA
Trigger: GGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAG...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACTGTTGCTCATCCCTTaGATCTCAGCCAAGACTGTG +
Preference number: 5 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTLLLIP*ISAKTV
Trigger: CACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTGGCAGAAGTCCCTGTaGCTCATCCCTTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYWQKSL*LIPLIS
Trigger: TGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCA...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGCAGCTCCAACAGGCTTaGCTTTCCATTTCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLQLQQA*LSISFS
Trigger: GCTGAACGAAATGGAAAGCAAAGCCTGTTGGAGCTG...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS TCA 90 bp ATGTGCGGCTTAGCAGCTCCTGTTGAAGCATCTCTTCAGCAGCATTaGGTTTCACCTGGTGTCCTTCCAGACACACTTCCAGGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: MCGLAAPVEASLQQH*VSPGVLPDTLPGLE
Trigger: TTCGAGACCTGGAAGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000525597.5
ENST00000527790.5
ENST00000528883.5
ENST00000529575.5
ENST00000530189.1
ENST00000533792.5
ENST00000650027.1
ENST00000684123.1
ENST00000684215.1
CDS TCA 90 bp ACTGAGGACCTGATTCAGTGCCCGATGATGTGGATGAGAGGTCATTaGCCACAGCAGTGTCGTCCCAGCCACTTTCTGTGTCTCCTAATA +
Preference number: 5 (lower is better)
Translates to: TEDLIQCPMMWMRGH*PQQCRPSHFLCLLI
Trigger: TATTAGGAGACACAGAAAGTGGCTGGGACGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp GCTGCTCTCAGTTTATTTGGGACTGGGGAGAAGACTAAAAATAAGTaGTGCTCTTGGAGGAGCTCACTGGTTCCCACACACAGCCTGACC +
Preference number: 5 (lower is better)
Translates to: AALSLFGTGEKTKNK*CSWRSSLVPTHSLT
Trigger: GGTCAGGCTGTGTGTGGGAACCAGTGAGCTCCTCCAAGAGCAGCACTTATTTTTAGTCTTCTCCCCAGTCCCAAATAAACTGAGAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS GCA 90 bp ACCTGTCGCAGCTCCTTGGCCAGACTCAAGCCTCAATTCGGATCCTaGCTCTGGGATTTGGTCACTTGCCATAGAAGTCAAAGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: TCRSSLARLKPQFGS*LWDLVTCHRSQSKV
Trigger: AACTTTGCTTTGACTTCTATGGCAAGTGACCAAATCCCAGAGGCAGGATCCGAATTGAGGCTTGAGTCTGGCCAAGGAGCTGCGACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS GCA 90 bp ACACATCTGCTCCTGCAGCTCACTGATCACATTCAGAACCGACTCTaGTTTTCTCTGCTTCTCCTCCTGCTCTCTCTGCTCCTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: THLLLQLTDHIQNRL*FSLLLLLLSLLLLH
Trigger: ATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGTCGGTTCTGAATGTGATCAGTGAGCTGCAGGAGCAGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS CCA 90 bp GGACACTCACCTTACCAGGGAGTCTCGGCCACTGCTCTGATGACATaGGTCACGTTTACTGCTCTTGATAGACTCAAGAGTAAAACACCC +
Preference number: 5 (lower is better)
Translates to: GHSPYQGVSATALMT*VTFTALDRLKSKTP
Trigger: GGGTGTTTTACTCTTGAGTCTATCAAGAGCAGTAAACGTGACCCATGTCATCAGAGCAGTGGCCGAGACTCCCTGGTAAGGTGAGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528883.5
ENST00000529321.1
CDS CCA 90 bp AGCTTGAGCTTCAGCTCAGACACTTCAGTCATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGGCTTAGCAGCTCCTGCAATATGAGG +
Preference number: 5 (lower is better)
Translates to: SLSFSSDTSVIRSSF*VSRDVRLSSSCNMR
Trigger: CCTCATATTGCAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS CCA 90 bp GTGGTAGGCTTATCAGTCCATCTGGGCCAGCTTGCCTCTCCTTCCTaGACCCTAGAGCTTAGATCATGTTCATATCCCAGTAGTACAGTC +
Preference number: 5 (lower is better)
Translates to: VVGLSVHLGQLASPS*TLELRSCSYPSSTV
Trigger: GACTGTACTACTGGGATATGAACATGATCTAAGCTCTAGGGTCCAGGAAGGAGAGGCAAGCTGGCCCAGATGGACTGATAAGCCTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS-3UTR CAA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATCTCTTCAGCAGCATaGAGTTTCACCTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: CWNILCESCTRAGVRCSYISSAA*SFTWCP
Trigger: AGGACACCAGGTGAAACTCAATGCTGCTGAAGAGAT...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACATCTTCCACTTTGATTTaGAGGTGCCTGAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ILCESCTRAGVRCSYMVTSSTLI*RCLSSC
Trigger: GCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGA...TGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GCCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTTCCACTTTGATTTaGAGGTGCCTGAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ATLRVQRDWPRGTQLLEYSSTLI*RCLSSC
Trigger: GCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGA...ATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTCCAACTCTTCCACTTaGATTTTGAGGTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLSNSST*ILRCLS
Trigger: GCTCAGGCACCTCAAAATCAAAGTGGAAGAGTTGGA...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCTCTCTCCGAAGGCCCTaGAGTGACCATCACAATCTC +
Preference number: 5 (lower is better)
Translates to: SGFKETGPGVHNCWNILCSLRRP*SDHHNL
Trigger: GAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAGA...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACATCCGGTTCTTCTTCATaGATTGAGAGAGTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CESCTRAGVRCSYMVTHTSGSSS*IERVLS
Trigger: GGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGA...TGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCCCCAAAGCCTGAAGAAAGGGCTGTCCTaGGGTTCTAACACCGGGAAG +
Preference number: 5 (lower is better)
Translates to: SLSVFPPESTFGNGPQSLKKGLS*GSNTGK
Trigger: CTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTT...CAGGCTTTGGGGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTAAAGTGGGATATTaGTGCTCCGCCAAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYGKVGY*CSAKKG
Trigger: CCCTTTCTTGGCGGAGCACAAATATCCCACTTTACC...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGGACTTCTCCTCCTGTTaGGTGTTGATGGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: VHNCWNILCESCTRAGVRDFSSC*VLMAFT
Trigger: AGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTC...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGTATCATCAAGCCACCTaGTCACCCAAATGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: LIPLISAKTVVHGPKALEYHQAT*SPKCGL
Trigger: TAGACCACATTTGGGTGACAAGGTGGCTTGATGATA...CTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGGGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTCTGTTGCTCATCCCTTaGATCTCAGCCAAGACTGTG +
Preference number: 5 (lower is better)
Translates to: MHTCGGEVQLYGDTHSVTLLLIP*ISAKTV
Trigger: CACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG...AGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CCACCCTCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTTGGCAGAAGTCCCTGTaGCTCATCCCTTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: PPSGFKETGPGVHNCWNIWQKSL*LIPLIS
Trigger: TGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCA...AATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp AGCGTTCCACTTGCTGAAACCTCCCTCCGGTTCTTCTTCATTGATTaGGAGAGTTCTCTCCGAAGGCCCTTGAGTGACCATCACAATCTC +
Preference number: 5 (lower is better)
Translates to: SVPLAETSLRFFFID*ESSLRRPLSDHHNL
Trigger: GAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000532416.1
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp TTATATGGTGACACACACAGTGTTACTGTGAGCTCTGCTTTTCTCTaGTTCTCCTCCTGCTCTCTCTGCTCCTTCTCCATGCCAACCAGC +
Preference number: 5 (lower is better)
Translates to: LYGDTHSVTVSSAFL*FSSCSLCSFSMPTS
Trigger: GCTGGTTGGCATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGCTCACAGTAACACTGTGTGTGTCACCATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS CCA 90 bp CCTGCGAAGACAGCTCCTCAGAGCAATGGCAGAGCCCACAGACACTaGCTTTATATCACAATGAGGGACAAGGCCATTGTGCTAAATTTC +
Preference number: 5 (lower is better)
Translates to: PAKTAPQSNGRAHRH*LYITMRDKAIVLNF
Trigger: GAAATTTAGCACAATGGCCTTGTCCCTCATTGTGATATAAAGCCAGTGTCTGTGGGCTCTGCCATTGCTCTGAGGAGCTGTCTTCGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526046.1
CDS CCA 90 bp TCAGCCACGAGAAATGCTTGTAAACATCAATGTCCCCATCCATGCTaGGCACCCATGTCAGCAGTTAGATGCCTTGGTGGAAAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: SATRNACKHQCPHPC*APMSAVRCLGGKSP
Trigger: AGGGCTTTTTCCACCAAGGCATCTAACTGCTGACATGGGTGCCCAGCATGGATGGGGACATTGATGTTTACAAGCATTTCTCGTGGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532926.5
ENST00000684215.1
CDS-3UTR CAA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACATCCAACTCTTCCACTTaGATTTTGAGGTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: ETGPGVHNCWNILCESCTSNSST*ILRCLS
Trigger: GCTCAGGCACCTCAAAATCAAAGTGGAAGAGTTGGA...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CCTTTGATCTCAGCCAAGACTGTGGTCCACGGGCCTAAGGCACTTGAGCTTTTCCAGACGTTGAATTTCTaGGTCTCTCTCTGTGTGACT +
Preference number: 5 (lower is better)
Translates to: PLISAKTVVHGPKALELFQTLNF*VSLCVT
Trigger: AGTCACACAGAGAGAGACCAAGAAATTCAACGTCTG...GAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGCTGAGATCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCCAGACGTTGAATTTCTaGGTCTCTCTCTGTGTGACT +
Preference number: 5 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVQTLNF*VSLCVT
Trigger: AGTCACACAGAGAGAGACCAAGAAATTCAACGTCTG...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATCCGGTTCTTCTTCATaGATTGAGAGAGTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLSGSSS*IERVLS
Trigger: GGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGA...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATTCCGGTTCTTCTTCATaGATTGAGAGAGTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CWNILCESCTRAGVRCSYSGSSS*IERVLS
Trigger: GGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGA...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTCCTCCTGTTTGGTGTaGATGGCTTTCACTGCTAAA +
Preference number: 5 (lower is better)
Translates to: VHNCWNILCESCTRAGVRSSCLV*MAFTAK
Trigger: TTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGA...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATTCCTCCTGTTTGGTGTaGATGGCTTTCACTGCTAAA +
Preference number: 5 (lower is better)
Translates to: CWNILCESCTRAGVRCSYSSCLV*MAFTAK
Trigger: TTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGA...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGTGTCCTCCTGTTTGGTGTaGATGGCTTTCACTGCTAAA +
Preference number: 5 (lower is better)
Translates to: HTCGGEVQLYGDTHSVTVSSCLV*MAFTAK
Trigger: TTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGA...CACAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATCATCAAGCCACCTaGTCACCCAAATGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: LLEYSLRVMHTCGGEVQLYHQAT*SPKCGL
Trigger: TAGACCACATTTGGGTGACAAGGTGGCTTGATGATA...TAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCCTGTTGCTCATCCCTTaGATCTCAGCCAAGACTGTG +
Preference number: 5 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPLLLIP*ISAKTV
Trigger: CACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAG...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS-3UTR CAA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGTGGCAGAAGTCCCTGTaGCTCATCCCTTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMWQKSL*LIPLIS
Trigger: TGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCA...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCTGGCAGAAGTCCCTGTaGCTCATCCCTTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPWQKSL*LIPLIS
Trigger: TGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCA...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS TCA 90 bp TTAATGCCTTTGGGATTCCGTTTACCATCTGGTGTCAGAGGAGACTaGGGACCTGATTCAGTGCCCGATGATGTGGATGAGAGGTCATTG +
Preference number: 5 (lower is better)
Translates to: LMPLGFRLPSGVRGD*GPDSVPDDVDERSL
Trigger: CAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 90 bp CCCAAATGTGGTCTAGCAGTGCAGACTTCTCCTCCTGTTTGGTGTTaGTGGCTTTCACTGCTAAAACAAGCTTCTTCCTGTGGAGTGGGT +
Preference number: 5 (lower is better)
Translates to: PKCGLAVQTSPPVWC*WLSLLKQASSCGVG
Trigger: ACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532112.1
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 90 bp TCTTCAGCCACGAGAAATGCTTGTAAACATCAATGTCCCCATCCATaGTGGGCACCCATGTCAGCAGTTAGATGCCTTGGTGGAAAAAGC +
Preference number: 5 (lower is better)
Translates to: SSATRNACKHQCPHP*WAPMSAVRCLGGKS
Trigger: GCTTTTTCCACCAAGGCATCTAACTGCTGACATGGGTGCCCAGCATGGATGGGGACATTGATGTTTACAAGCATTTCTCGTGGCTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532926.5
ENST00000684215.1
CDS-3UTR CAA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCATCTCTTCAGCAGCATaGAGTTTCACCTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPISSAA*SFTWCP
Trigger: AGGACACCAGGTGAAACTCAATGCTGCTGAAGAGAT...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR CAA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGATCTCTTCAGCAGCATaGAGTTTCACCTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMISSAA*SFTWCP
Trigger: AGGACACCAGGTGAAACTCAATGCTGCTGAAGAGAT...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299492.9
ENST00000533792.5
CDS-3UTR CAA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCTCCAACTCTTCCACTTaGATTTTGAGGTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPSNSST*ILRCLS
Trigger: GCTCAGGCACCTCAAAATCAAAGTGGAAGAGTTGGA...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATCAGACGTTGAATTTCTaGGTCTCTCTCTGTGTGACT +
Preference number: 5 (lower is better)
Translates to: LEYSLRVMHTCGGEVQLYQTLNF*VSLCVT
Trigger: AGTCACACAGAGAGAGACCAAGAAATTCAACGTCTG...ATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATAAGAAAGGGCTGTCCTaGGGTTCTAACACCGGGAAG +
Preference number: 5 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHKKGLS*GSNTGK
Trigger: CTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTT...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACATCCTCCTGTTTGGTGTaGATGGCTTTCACTGCTAAA +
Preference number: 5 (lower is better)
Translates to: ETGPGVHNCWNILCESCTSSCLV*MAFTAK
Trigger: TTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGA...TGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCGAGTCATGGACTTCTCCTCCTGTTaGGTGTTGATGGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: QRDWPRGTQLLEYSLRVMDFSSC*VLMAFT
Trigger: AGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTC...CATGACTCGCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGTATCATCAAGCCACCTaGTCACCCAAATGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: NILCESCTRAGVRCSYMVYHQAT*SPKCGL
Trigger: TAGACCACATTTGGGTGACAAGGTGGCTTGATGATA...CACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp AAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCCTGTTGCTCATCCCCACAACACAATTCCATaGTCACTGTGGCAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: KAQHNSIVTVAEVPVAHPHNTIP*SLWQKS
Trigger: GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTG...GGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
ENST00000534552.1
CDS TCA 90 bp TGCCTCTGGGATTTGGTCACTTGCCATAGAAGTCAAAGCAAAGTTTaGTGCCTTGTAGGAGGCCCCAGTTTCTGCCTCATGTCACAAAGT +
Preference number: 5 (lower is better)
Translates to: CLWDLVTCHRSQSKV*CLVGGPSFCLMSQS
Trigger: ACTTTGTGACATGAGGCAGAAACTGGGGCCTCCTACAAGGCATCAAACTTTGCTTTGACTTCTATGGCAAGTGACCAAATCCCAGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS CCA 90 bp TTGATGCCTTGTAGGAGGCCCCAGTTTCTGCCTCATGTCACAAAGTaGATCAGTTGGGCCAGCAAGTACTTGGCTTTCAAAGGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: LMPCRRPQFLPHVTK*ISWASKYLAFKGFS
Trigger: TGAAAAACCTTTGAAAGCCAAGTACTTGCTGGCCCAACTGATCCACTTTGTGACATGAGGCAGAAACTGGGGCCTCCTACAAGGCATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS-3UTR CAA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCCAGGGCCACCTGTTCTaGCAGCTGGGCGACTTCAGC +
Preference number: 5 (lower is better)
Translates to: SRITRHVKVSLSVFPPESQGHLF*QLGDFS
Trigger: GCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCTG...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCAGGGTTCAAAGAGACTGGCCCAGGGGTACACAATTGCTGGAATATTCTCTGCCAGACGTTGAATTTCTaGGTCTCTCTCTGTGTGACT +
Preference number: 5 (lower is better)
Translates to: SGFKETGPGVHNCWNILCQTLNF*VSLCVT
Trigger: AGTCACACAGAGAGAGACCAAGAAATTCAACGTCTG...GCAGAGAATATTCCAGCAATTGTGTACCCCTGGGCCAGTCTCTTTGAACCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGTGCAGTTATAACTTCTTAATGCCTTaGGGATTCCGTTTACCATCT +
Preference number: 5 (lower is better)
Translates to: CWNILCESCTRAGVRCSYNFLMP*GFRLPS
Trigger: AGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTT...ATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTACTGAACTTCTTAATGCCTTaGGGATTCCGTTTACCATCT +
Preference number: 5 (lower is better)
Translates to: CTRAGVRCSYMVTHTVLLNFLMP*GFRLPS
Trigger: AGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTT...CAGTAACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTACACAATTGCTGGAATATTCTCTGCGAGTCATGCACACGTGCGGGGGTGAGGAACTTCTTAATGCCTTaGGGATTCCGTTTACCATCT +
Preference number: 5 (lower is better)
Translates to: VHNCWNILCESCTRAGVRNFLMP*GFRLPS
Trigger: AGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTT...CCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CTGTGGCAGAAGTCCCTGTTGCTCATCCCTTTGATCTCAGCCAAGACTGTGGTCAACTTCTTAATGCCTTaGGGATTCCGTTTACCATCT +
Preference number: 5 (lower is better)
Translates to: LWQKSLLLIPLISAKTVVNFLMP*GFRLPS
Trigger: AGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTT...GACCACAGTCTTGGCTGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS CCA 90 bp ATGATTCCTTTTAGGGAGACATTTCCTCCCTGGGTGCAGCCATGGTaGATACATCATTATAGATGCCTTGCTCTTTCAAGATGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: MIPFRETFPPWVQPW*IHHYRCLALSRCKG
Trigger: CCCCTTGCATCTTGAAAGAGCAAGGCATCTATAATGATGTATCCACCATGGCTGCACCCAGGGAGGAAATGTCTCCCTAAAAGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS-3UTR CAA 90 bp TCTCTGGACCTGCATCGAAGTTCATGTGTTTCCACTGGTGCTGAAGATGAACATTCTTCCACTTTGATTTaGAGGTGCCTGAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: SLDLHRSSCVSTGAEDEHSSTLI*RCLSSC
Trigger: GCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGA...ATGTTCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp ACCACCTCTGAAGTAAGGCACAACACAATTCCATTGTCACTGTGGCAGAAGTCCTATCATCAAGCCACCTaGTCACCCAAATGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: TTSEVRHNTIPLSLWQKSYHQAT*SPKCGL
Trigger: TAGACCACATTTGGGTGACAAGGTGGCTTGATGATA...GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTTCACGTTTACTGCTCTaGATAGACTCAAGAGTAAAA +
Preference number: 5 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVSRLLL*IDSRVK
Trigger: TTTTACTCTTGAGTCTATCAAGAGCAGTAAACGTGA...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528883.5
CDS-3UTR CAA 90 bp GTCATGCACACGTGCGGGGGTGAGGTGCAGTTATATGGTGACACACACAGTGTTATAGCTTCCACATCCTaGTTATTAACTTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: VMHTCGGEVQLYGDTHSVIASTS*LLTFPF
Trigger: GAATGGGAAAGTTAATAACAAGGATGTGGAAGCTAT...AACACTGTGTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS GCA 90 bp ATACAGTCTCATCTGTGTCTGTGCCAGATCCAATGTAATATAAGCTaGAGAGATTATGTTCAGGGTGTGTGGAATGGGTGGGTGCTTAGG +
Preference number: 5 (lower is better)
Translates to: IQSHLCLCQIQCNIS*RDYVQGVWNGWVLR
Trigger: CCTAAGCACCCACCCATTCCACACACCCTGAACATAATCTCTGCAGCTTATATTACATTGGATCTGGCACAGACACAGATGAGACTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS CCA 90 bp GTGTGGAATGGGTGGGTGCTTAGGATGCATGACATGAAAGGCAACTaGATATATTCAATGGGTGTCTTTCATACTTCTCCTTCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: VWNGWVLRMHDMKGN*IYSMGVFHTSPSLG
Trigger: GCCAAGAGAAGGAGAAGTATGAAAGACACCCATTGAATATATCCAGTTGCCTTTCATGTCATGCATCCTAAGCACCCACCCATTCCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS CCA 90 bp CAGATCCAATGTAATATAAGCTGCAGAGATTATGTTCAGGGTGTGTaGAATGGGTGGGTGCTTAGGATGCATGACATGAAAGGCAACTGG +
Preference number: 5 (lower is better)
Translates to: QIQCNISCRDYVQGV*NGWVLRMHDMKGNW
Trigger: CCAGTTGCCTTTCATGTCATGCATCCTAAGCACCCACCCATTCCACACACCCTGAACATAATCTCTGCAGCTTATATTACATTGGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS TCA 90 bp ATGTTCAGGGTGTGTGGAATGGGTGGGTGCTTAGGATGCATGACATaGAAGGCAACTGGATATATTCAATGGGTGTCTTTCATACTTCTC +
Preference number: 5 (lower is better)
Translates to: MFRVCGMGGCLGCMT*KATGYIQWVSFILL
Trigger: GAGAAGTATGAAAGACACCCATTGAATATATCCAGTTGCCTTTCATGTCATGCATCCTAAGCACCCACCCATTCCACACACCCTGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS-3UTR CAA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCTGCAGGCAGTGGGGGTaGAACTTGTTGACATGCAGC +
Preference number: 5 (lower is better)
Translates to: SRITRHVKVSLSVFPPESCRQWG*NLLTCS
Trigger: GCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCA...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp CATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCACCTTTGGCAATGGTCACAACACAATTCCATaGTCACTGTGGCAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: HVKVSLSVFPPESTFGNGHNTIP*SLWQKS
Trigger: GGACTTCTGCCACAGTGACAATGGAATTGTGTTGTG...ACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS-3UTR CAA 90 bp TCAAGAATTACTAGACATGTAAAAGTGTCTTTAAGTGTCTTTCCTCCTGAGTCCTCACTTTTCTGTCCCTaGGAGTCCCTGGTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: SRITRHVKVSLSVFPPESSLFCP*ESLVLE
Trigger: CTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGA...GGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000530181.5
ENST00000533792.5
CDS TCA 90 bp TTCACAGTTAGGTATTGCAGCATTCGTCTGTCAACTCTAGATTCATaGAACTGGTCTTTGTACTGGGGTAAGCCAATATCATCAAGCCAC +
Preference number: 5 (lower is better)
Translates to: FTVRYCSIRLSTLDS*NWSLYWGKPISSSH
Trigger: GTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACAGACGAATGCTGCAATACCTAACTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 90 bp TGTAATATAAGCTGCAGAGATTATGTTCAGGGTGTGTGGAATGGGTaGGTGCTTAGGATGCATGACATGAAAGGCAACTGGATATATTCA +
Preference number: 5 (lower is better)
Translates to: CNISCRDYVQGVWNG*VLRMHDMKGNWIYS
Trigger: TGAATATATCCAGTTGCCTTTCATGTCATGCATCCTAAGCACCCACCCATTCCACACACCCTGAACATAATCTCTGCAGCTTATATTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS GCA 72 bp TACGGGGCCGAGGCTCCTCTCCGGGCGGCTCAGGTGTaGGGGCCGCTCCCGTGTCCCTCCCACCTTCAAACA +
Preference number: 6 (lower is better)
Translates to: YGAEAPLRAAQV*GPLPCPSHLQT
Trigger: TGTTTGAAGGTGGGAGGGACACGGGAGCGGCCCGCACACCTGAGCCGCCCGGAGAGGAGCCTCGGCCCCGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528947.5
ENST00000684123.1
CDS GCA 72 bp AGAAGCGAGCGACGGGCCACTGGCCCACCGACCAACTaGCGGACCAAGCGCCCGACCAACCAGCGGACCGAC +
Preference number: 6 (lower is better)
Translates to: RSERRATGPPTN*RTKRPTNQRTD
Trigger: GTCGGTCCGCTGGTTGGTCGGGCGCTTGGTCCGGCAGTTGGTCGGTGGGCCAGTGGCCCGTCGCTCGCTTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528947.5
ENST00000684123.1
CDS GCA 72 bp ACTCAGGTGACCCCTCCCAACAGGCACAGTCCTGGCTaGAGGGCTGGGGCTCGGCCACACCGTCGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: TQVTPPNRHSPG*RAGARPHRRWP
Trigger: CGGCCAGCGACGGTGTGGCCGAGCCCCAGCCCTGCAGCCAGGACTGTGCCTGTTGGGAGGGGTCACCTGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS CCA 72 bp GGCACCCGCTCCCTCTCGGGCACCGAAGAAGCCTGCTaGGACCCGTCCACCAGGGTTCCTGTTCCCGGGGGA +
Preference number: 6 (lower is better)
Translates to: GTRSLSGTEEAC*DPSTRVPVPGG
Trigger: TCCCCCGGGAACAGGAACCCTGGTGGACGGGTCCCAGCAGGCTTCTTCGGTGCCCGAGAGGGAGCGGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS GCA 72 bp TTGGGCACCCGCTCCCTCTCGGGCACCGAAGAAGCCTaGTGGGACCCGTCCACCAGGGTTCCTGTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: LGTRSLSGTEEA*WDPSTRVPVPG
Trigger: CCCGGGAACAGGAACCCTGGTGGACGGGTCCCAGCAGGCTTCTTCGGTGCCCGAGAGGGAGCGGGTGCCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS CCA 72 bp TCAGCAGCCTGTCTGAGACACCCTGCCAGCCCGGACTaGGCTTGCAGAGGGGGCTGTGTGCCCGCTCCCCAC +
Preference number: 6 (lower is better)
Translates to: SAACLRHPASPD*ACRGGCVPAPH
Trigger: GTGGGGAGCGGGCACACAGCCCCCTCTGCAAGCCCAGTCCGGGCTGGCAGGGTGTCTCAGACAGGCTGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS TCA 72 bp TGCGGGCCGCTCCCGTGTCCCTCCCACCTTCAAACATaGGAGCCCAGAAGCGAGCGACGGGCCACTGGCCCA +
Preference number: 6 (lower is better)
Translates to: CGPLPCPSHLQT*EPRSERRATGP
Trigger: TGGGCCAGTGGCCCGTCGCTCGCTTCTGGGCTCTCATGTTTGAAGGTGGGAGGGACACGGGAGCGGCCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299492.9
ENST00000528947.5
ENST00000684123.1
CDS CAA 72 bp AGCCTGTCTGAGACACCCTGCCAGCCCGGACTGGGCTaGCAGAGGGGGCTGTGTGCCCGCTCCCCACAGAAG +
Preference number: 6 (lower is better)
Translates to: SLSETPCQPGLG*QRGLCARSPQK
Trigger: CTTCTGTGGGGAGCGGGCACACAGCCCCCTCTGCAAGCCCAGTCCGGGCTGGCAGGGTGTCTCAGACAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS CAA 90 bp CCTGTCAGCAGCCTGTCTGAGACACCCTGCCAGCCCGGACTGGGCTaGCAGAGGGGGCTGTGTGCCCGCTCCCCACAGAAGCAAAGGCTC +
Preference number: 6 (lower is better)
Translates to: PVSSLSETPCQPGLG*QRGLCARSPQKQRL
Trigger: GAGCCTTTGCTTCTGTGGGGAGCGGGCACACAGCCCCCTCTGCAAGCCCAGTCCGGGCTGGCAGGGTGTCTCAGACAGGCTGCTGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS CCA 72 bp GCAGGCTGCTCCCCGTGGCGTCAGGCTGGCAGATGGTaGGAGGAGATTTGGCAGCCTCTCCATTGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: AGCSPWRQAGRW*EEIWQPLHWAW
Trigger: CCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp TCAAACATGAGAGCCCAGAAGCGAGCGACGGGCCACTaGCCCACCGACCAACTGCCGGACCAAGCGCCCGAC +
Preference number: 6 (lower is better)
Translates to: SNMRAQKRATGH*PTDQLPDQAPD
Trigger: GTCGGGCGCTTGGTCCGGCAGTTGGTCGGTGGGCCAGTGGCCCGTCGCTCGCTTCTGGGCTCTCATGTTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528947.5
ENST00000684123.1
CDS GCA 72 bp CCCAGCCACTTTCTGTGTCTCTCAGCCTCAGCAGGCTaGTCCCCGTGGCGTCAGGCTGGCAGATGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: PSHFLCLSASAG*SPWRQAGRWWE
Trigger: CTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAGAGACACAGAAAGTGGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
CDS GCA 72 bp CCCTGGGGCCACCCCTGGACACCTGTCCCACAGCTCTaGTTCATGCCTGTCAGCAGCCTGTCTGAGACACCC +
Preference number: 6 (lower is better)
Translates to: PWGHPWTPVPQL*FMPVSSLSETP
Trigger: GGGTGTCTCAGACAGGCTGCTGACAGGCATGAAGCAGAGCTGTGGGACAGGTGTCCAGGGGTGGCCCCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530582.5
ENST00000684123.1
CDS CCA 72 bp CTCAGCCTCAGCAGGCTGCTCCCCGTGGCGTCAGGCTaGCAGATGGTGGGAGGAGATTTGGCAGCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LSLSRLLPVASG*QMVGGDLAASP
Trigger: TGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
CDS TCA 72 bp CCCACAGCTCTGCTTCATGCCTGTCAGCAGCCTGTCTaGGACACCCTGCCAGCCCGGACTGGGCTTGCAGAG +
Preference number: 6 (lower is better)
Translates to: PTALLHACQQPV*DTLPARTGLAE
Trigger: CTCTGCAAGCCCAGTCCGGGCTGGCAGGGTGTCTCAGACAGGCTGCTGACAGGCATGAAGCAGAGCTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS GCA 72 bp TCCCTTGGAGTCCCTGGTCCTAGAGAGTCTTGGCCCTaGGGTTGCCCGGAGCCCACCTCGTCGAAACTCTGC +
Preference number: 6 (lower is better)
Translates to: SLGVPGPRESWP*GCPEPTSSKLC
Trigger: GCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp TTCAGCCTCAGCAGGCTGCTCCCCGTGGCGTCAGGCTaGCAGATGGTGGGAGGAGATTTGGCAGCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: FSLSRLLPVASG*QMVGGDLAASP
Trigger: TGGAGAGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000530081.1
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp GGCTGTAGCCTGGGCACACAAAGGGGCTTCAGCACATaGGCTGCTTCGGCACCCAAGGGCCTTCAGTGCACC +
Preference number: 6 (lower is better)
Translates to: GCSLGTQRGFST*AASAPKGLQCT
Trigger: GGTGCACTGAAGGCCCTTGGGTGCCGAAGCAGCTCATGTGCTGAAGCCCCTTTGTGTGCCCAGGCTACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS GCA 72 bp GGCCAAAGTCCTCCAGCCATGCACACACACGCTCTGTaGTCCACTGGGCAAAGGGGGCATTGGCGTCACTGG +
Preference number: 6 (lower is better)
Translates to: GQSPPAMHTHAL*STGQRGHWRHW
Trigger: CCAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532112.1
CDS CCA 72 bp GGCCCCCAGCCGAGCGCTCCCTCACTGCACCAGGTCTaGAGAAAGTGCTGTCTGGGAATCTGTCTAACCAGC +
Preference number: 6 (lower is better)
Translates to: GPQPSAPSLHQV*RKCCLGICLTS
Trigger: GCTGGTTAGACAGATTCCCAGACAGCACTTTCTCCAGACCTGGTGCAGTGAGGGAGCGCTCGGCTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS CCA 72 bp TCCTCCAGCCATGCACACACACGCTCTGTGCTCCACTaGGCAAAGGGGGCATTGGCGTCACTGGGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSSHAHTRSVLH*AKGALASLGSR
Trigger: CCTGCTTCCCAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532112.1
CDS CCA 72 bp GAAGAGCGCAGCATGGTTGAAGACACACATGGACCCTaGGGCCACCCCTGGACACCTGTCCCACAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: EERSMVEDTHGP*GHPWTPVPQLC
Trigger: GCAGAGCTGTGGGACAGGTGTCCAGGGGTGGCCCCAGGGTCCATGTGTGTCTTCAACCATGCTGCGCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530582.5
ENST00000684123.1
CDS TCA 72 bp CGTCGCTGGCCGCCACCTCCTCAGGGTGGTCCCTACTaGGTAACAGGCGCTCTTGAATCTGCCTGTGGATGT +
Preference number: 6 (lower is better)
Translates to: RRWPPPPQGGPY*VTGALESACGC
Trigger: ACATCCACAGGCAGATTCAAGAGCGCCTGTTACTCAGTAGGGACCACCCTGAGGAGGTGGCGGCCAGCGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS CCA 72 bp CTTGGTGGTCAGGTGGCGCCTGAGGAGCGTCTTTTGTaGGGGGATGTTGAGAAGCATAGCCAGGGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: LGGQVAPEERLL*GDVEKHSQGVP
Trigger: GGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCACCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp GCTCCAGCATCTCCAAGGCCAGCCTCAAGTCCTCGATaGGATGGAGCACCGGGAAGGGGTTCATGTAGGAGG +
Preference number: 6 (lower is better)
Translates to: APASPRPASSPR*DGAPGRGSCRR
Trigger: CCTCCTACATGAACCCCTTCCCGGTGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000526046.1
ENST00000526873.5
ENST00000527790.5
ENST00000528947.5
ENST00000684123.1
CDS TCA 72 bp CAAGGCAGGTGGGCTAGGCCAGAGAGCCACTCACAATaGGGCCTCCATGGACTCCACTCCCTCGAAGATTGG +
Preference number: 6 (lower is better)
Translates to: QGRWARPESHSQ*GLHGLHSLEDW
Trigger: CCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTGTGAGTGGCTCTCTGGCCTAGCCCACCTGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529664.1
CDS GCA 72 bp GGCCAAAGTCCTCCAGCCATGCACACACACGCTCTGTaGTCCACTGGGCAAAGGGGGCATTGGCGTCACTTT +
Preference number: 6 (lower is better)
Translates to: GQSPPAMHTHAL*STGQRGHWRHF
Trigger: AAAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp GAGTTGGGGGCAGGCAGGCGAGAGTCATTCAGCAGCTaGTCCTGGCTCAGCATTGTCTTCCGAAGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: ELGAGRRESFSS*SWLSIVFRRCH
Trigger: ATGGCACCTTCGGAAGACAATGCTGAGCCAGGACCAGCTGCTGAATGACTCTCGCCTGCCTGCCCCCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529021.1
CDS CCA 72 bp GCAACATCTACTCCCTGCCAGGCCCTGTGCCAGGTCTaGAGCAAGCACTCCCCACATCTGGGAGACAGACAA +
Preference number: 6 (lower is better)
Translates to: ATSTPCQALCQV*SKHSPHLGDRQ
Trigger: TTGTCTGTCTCCCAGATGTGGGGAGTGCTTGCTCCAGACCTGGCACAGGGCCTGGCAGGGAGTAGATGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS CAA 90 bp CCCTACGCTCTCAGCCACGAAGAAAGTCATCTCCAGTCATCAGAGTaGGGGGCAGGCAGGCGAGAGTCATTCAGCAGCTGGTCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: PYALSHEESHLQSSE*GAGRRESFSSWSWL
Trigger: GAGCCAGGACCAGCTGCTGAATGACTCTCGCCTGCCTGCCCCCAACTCTGATGACTGGAGATGACTTTCTTCGTGGCTGAGAGCGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS GCA 72 bp TGTCCGGGAGAGCTGGCTGTGCAGACGCTCAATTTCTaGATCTTTCAGGGCCACCTGTTCTTGCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: CPGELAVQTLNF*IFQGHLFLQLG
Trigger: GCCCAGCTGCAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 72 bp AAACCCTTCGGAGCATCCCGACTTCCTCGGCCCGCGTaGAATCCAGGCAAAATTGAGGTTGTCTCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: KPFGASRLPRPA*NPGKIEVVSEP
Trigger: CGGCTCAGAGACAACCTCAATTTTGCCTGGATTGCACGCGGGCCGAGGAAGTCGGGATGCTCCGAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526873.5
CDS GCA 72 bp GGACCACTGTACAACTTCTCATCAGCTGGCCGCCGGTaGAGGCAGTGGGGGTTGAACTTGTTGACATGCAGC +
Preference number: 6 (lower is better)
Translates to: GPLYNFSSAGRR*RQWGLNLLTCS
Trigger: GCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGATGAGAAGTTGTACAGTGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524495.5
CDS GCA 72 bp CCGAGCGCTCCCTCACTGCACCAGGTCTGGAGAAAGTaGTGTCTGGGAATCTGTCTAACCAGCTCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: PSAPSLHQVWRK*CLGICLTSSAG
Trigger: ACCTGCTGAGCTGGTTAGACAGATTCCCAGACAGCACTTTCTCCAGACCTGGTGCAGTGAGGGAGCGCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS GCA 72 bp ATGGTCACCCGACAAACATCAGCAACATCTACTCCCTaGCAGGCCCTGTGCCAGGTCTGGAGCAAGCACTCC +
Preference number: 6 (lower is better)
Translates to: MVTRQTSATSTP*QALCQVWSKHS
Trigger: GGAGTGCTTGCTCCAGACCTGGCACAGGGCCTGGCAGGGAGTAGATGTTGCTGATGTTTGTCGGGTGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS CAA 72 bp AAAGGTATGAAGCCTGCGGTGAAGAGCGCAGCATGGTaGAAGACACACATGGACCCTGGGGCCACCCCTGGA +
Preference number: 6 (lower is better)
Translates to: KGMKPAVKSAAW*KTHMDPGATPG
Trigger: TCCAGGGGTGGCCCCAGGGTCCATGTGTGTCTTCAACCATGCTGCGCTCTTCACCGCAGGCTTCATACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530582.5
ENST00000684123.1
CDS CAA 90 bp GCTGCTTCGGCACCCAAGGGCCTTCAGTGCACCCGCCCTTACCTGTaGAAGCATCTCTTCAGCAGCATTGAGTTTCACCTGGTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: AASAPKGLQCTRPYL*KHLFSSIEFHLVSF
Trigger: GAAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGTAAGGGCGGGTGCACTGAAGGCCCTTGGGTGCCGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS TCA 72 bp GGCCCCGGTAGCCACTGTAGACCCTGTGACTATCACTaGCACCGTCACTGGGCTCCATTGGGCAAATGTAGT +
Preference number: 6 (lower is better)
Translates to: GPGSHCRPCDYH*HRHWAPLGKCS
Trigger: ACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000534552.1
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp TGTTACTGTGAGCTCTCAGGGTGCACAGAGGGCAGGTaGCAAGGGCATCAGCTAATCTGTCCCACCTGGTCC +
Preference number: 6 (lower is better)
Translates to: CYCELSGCTEGR*QGHQLICPTWS
Trigger: GGACCAGGTGGGACAGATTAGCTGATGCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000533792.5
ENST00000684215.1
CDS GCA 72 bp CACACACACACACACACACACACACACGCACATACATaGACGCACACGCACCAGGACTGGGATTCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: HTHTHTHTHAHT*THTHQDWDSEP
Trigger: GGGCTCTGAATCCCAGTCCTGGTGCGTGTGCGTGCATGTATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000532926.5
ENST00000684215.1
CDS GCA 72 bp GACAGTTTCAGACACACAGCGACACAGAGCAGACCGTaGTGCTTCAGTGTCCTCCCCGACCACCCCAACAAA +
Preference number: 6 (lower is better)
Translates to: DSFRHTATQSRP*CFSVLPDHPNK
Trigger: TTTGTTGGGGTGGTCGGGGAGGACACTGAAGCAGCACGGTCTGCTCTGTGTCGCTGTGTGTCTGAAACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000532926.5
ENST00000684215.1
CDS GCA 72 bp GCTGAGCCTCGTGGGAGTGTCCATGGTCTCTGGACCTaGATCGAAGTTCATGTGTTTCCACTGGTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: AEPRGSVHGLWT*IEVHVFPLVLV
Trigger: GACCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGGCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534552.1
CDS CCA 72 bp GTTGAGAAGCATAGCCAGGGTGTCCCCAGTGAAGCGTaGCTCCAGGATAATGAGGCCTCCATGGACTCCACT +
Preference number: 6 (lower is better)
Translates to: VEKHSQGVPSEA*LQDNEASMDST
Trigger: AGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CAA 72 bp CTCAGCCACGAAGAAAGTCATCTCCAGTCATCAGAGTaGGGGGCAGGCAGGCGAGAGTCATTCAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LSHEESHLQSSE*GAGRRESFSSW
Trigger: CCAGCTGCTGAATGACTCTCGCCTGCCTGCCCCCAACTCTGATGACTGGAGATGACTTTCTTCGTGGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529021.1
ENST00000530582.5
ENST00000684123.1
CDS CAA 72 bp CACACACGCTCTGTGCTCCACTGGGCAAAGGGGGCATaGGCGTCACTGGGAAGCAGGAAAACAGCATATTCC +
Preference number: 6 (lower is better)
Translates to: HTRSVLHWAKGA*ASLGSRKTAYS
Trigger: GGAATATGCTGTTTTCCTGCTTCCCAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532112.1
CDS CAA 72 bp GTCCTGGCTCAGCATTGTCGTAAGGCGGTGAATGTCTaGGGAGAGGAGCCCTATCTGCGTCACGGTACCTTC +
Preference number: 6 (lower is better)
Translates to: VLAQHCRKAVNV*GEEPYLRHGTF
Trigger: GAAGGTACCGTGACGCAGATAGGGCTCCTCTCCCAAGACATTCACCGCCTTACGACAATGCTGAGCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530582.5
ENST00000684123.1
CDS CAA 90 bp CCATTGGGCGTGGCTCCTGAAAGCTTCCCAGGTAAAGTGGGATATTaGTGCTCCGCCAAGAAAGGGCTGTCCTTGGGTTCTAACACCGGG +
Preference number: 6 (lower is better)
Translates to: PLGVAPESFPGKVGY*CSAKKGLSLGSNTG
Trigger: CCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532381.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CAA 90 bp GGCTCCAGGATAATGAGGCCTCCATGGACTCCACTCCCTCGAAGATaGGGTGCATACTCTGCCAGGTCCACAGATCGTAACCACTCCATC +
Preference number: 6 (lower is better)
Translates to: GSRIMRPPWTPLPRR*GAYSARSTDRNHSI
Trigger: GATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp GCTCTCTTCAAACCATTCCTTTATGTAGGCAGCTGTTaGGCCAGGGATCTGGCTCAGGAGGGCTGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: ALFKPFLYVGSC*ARDLAQEGCSL
Trigger: GAGAGAGCAGCCCTCCTGAGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000524548.5
ENST00000527790.5
ENST00000684123.1
CDS CCA 72 bp ACACACGCTCTGTGCTCCACTGGGCAAAGGGGGCATTaGCGTCACTGGGAAGCAGGAAAACAGCATATTCCT +
Preference number: 6 (lower is better)
Translates to: THALCSTGQRGH*RHWEAGKQHIP
Trigger: AGGAATATGCTGTTTTCCTGCTTCCCAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532112.1
CDS CAA 72 bp TCCTGTTCAGCCTCCGGACCAATCAAGGCATTGAACTaGGTGGTCAGGTGGCGCCTGAGGAGCGTCTTTTGT +
Preference number: 6 (lower is better)
Translates to: SCSASGPIKALN*VVRWRLRSVFC
Trigger: ACAAAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CAA 72 bp GCACCCAAGGGCCTTCAGTGCACCCGCCCTTACCTGTaGAAGCATCTCTTCAGCAGCATTGAGTTTCACCTG +
Preference number: 6 (lower is better)
Translates to: APKGLQCTRPYL*KHLFSSIEFHL
Trigger: CAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGTAAGGGCGGGTGCACTGAAGGCCCTTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS CAA 90 bp ATTTTCTCTCGCTTCTCCTGTTCAGCCTCCGGACCAATCAAGGCATaGAACTTGGTGGTCAGGTGGCGCCTGAGGAGCGTCTTTTGTGGG +
Preference number: 6 (lower is better)
Translates to: IFSRFSCSASGPIKA*NLVVRWRLRSVFCG
Trigger: CCCACAAAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAGAAGCGAGAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CAA 90 bp CTGGGACGGAGCCTGCCAGAGGGAAACAGTCCTGAAGAAAATTCCTaGTCTGGCTTCCCCCTTCTGGAGTGGCTGGAACTCATTACTGAG +
Preference number: 6 (lower is better)
Translates to: LGRSLPEGNSPEENS*SGFPLLEWLELITE
Trigger: CTCAGTAATGAGTTCCAGCCACTCCAGAAGGGGGAAGCCAGACAAGGAATTTTCTTCAGGACTGTTTCCCTCTGGCAGGCTCCGTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525597.5
ENST00000650027.1
CDS TCA 72 bp CCAGAAGATACCCACTGCCTGGCAAAGATCACATACTaGGCCAGGCCAAAGTCCTCCAGCCATGCACACACA +
Preference number: 6 (lower is better)
Translates to: PEDTHCLAKITY*ARPKSSSHAHT
Trigger: TGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532112.1
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 72 bp CGCTCAATTTCTGCATCTTTCAGGGCCACCTGTTCTTaGAGCTGGGCGACTTCAGCCTTAGTGGCCTTTAGC +
Preference number: 6 (lower is better)
Translates to: RSISASFRATCS*SWATSALVAFS
Trigger: GCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 72 bp GTAGTGATAGGGATCCTATTGCAGCAAGTGGGAAGCTaGATTTTTACGGCTTCCCCGTCCCTTCCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: VVIGILLQQVGS*IFTASPSLPQP
Trigger: GGGCTGAGGAAGGGACGGGGAAGCCGTAAAAATGCAGCTTCCCACTTGCTGCAATAGGATCCCTATCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529664.1
CDS GCA 72 bp CTGTGGATGTCCAGCTGCAGCCTACACATCTGCTCCTaGAGCTCACTGATCACATTCAGAACCGACTCTGCT +
Preference number: 6 (lower is better)
Translates to: LWMSSCSLHICS*SSLITFRTDSA
Trigger: AGCAGAGTCGGTTCTGAATGTGATCAGTGAGCTGCAGGAGCAGATGTGTAGGCTGCAGCTGGACATCCACAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS GCA 72 bp ATCTGCCTGTGGATGTCCAGCTGCAGCCTACACATCTaGTCCTGCAGCTCACTGATCACATTCAGAACCGAC +
Preference number: 6 (lower is better)
Translates to: ICLWMSSCSLHI*SCSSLITFRTD
Trigger: GTCGGTTCTGAATGTGATCAGTGAGCTGCAGGAGCAGATGTGTAGGCTGCAGCTGGACATCCACAGGCAGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS CCA 72 bp CATTGGGCGTGGCTCCTGAAAGCTTCCCAGGTAAAGTaGGATATTTGTGCTCCGCCAAGAAAGGGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: HWAWLLKASQVK*DICAPPRKGCP
Trigger: AGGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532381.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp CAAATCTACACATGTGCCGAATGGCCATACACGCTGTaGAGAACAGGGGCACGGCTTCCACACTCAAGCATG +
Preference number: 6 (lower is better)
Translates to: QIYTCAEWPYTL*RTGARLPHSSM
Trigger: CATGCTTGAGTGTGGAAGCCGTGCCCCTGTTCTCCACAGCGTGTATGGCCATTCGGCACATGTGTAGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS CCA 72 bp GCACACCTGGCCTGCGAAGACAGCTCCTCAGAGCAATaGCAGAGCCCACAGACACTGGCTTTATATCACAAT +
Preference number: 6 (lower is better)
Translates to: AHLACEDSSSEQ*QSPQTLALYHN
Trigger: ATTGTGATATAAAGCCAGTGTCTGTGGGCTCTGCCATTGCTCTGAGGAGCTGTCTTCGCAGGCCAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526046.1
CDS CCA 72 bp GGGACTGGGGAGAAGACTAAAAATAAGTGCTGCTCTTaGAGGAGCTCACTGGTTCCCACACACAGCCTGACC +
Preference number: 6 (lower is better)
Translates to: GTGEKTKNKCCS*RSSLVPTHSLT
Trigger: GGTCAGGCTGTGTGTGGGAACCAGTGAGCTCCTCCAAGAGCAGCACTTATTTTTAGTCTTCTCCCCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS CAA 72 bp AGCTCTCTTCAAACCATTCCTTTATGTAGGCAGCTGTaGGGCCAGGGATCTGGCTCAGGAGGGCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: SSLQTIPLCRQL*GQGSGSGGLLS
Trigger: AGAGAGCAGCCCTCCTGAGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299492.9
ENST00000524548.5
ENST00000527790.5
ENST00000684123.1
CDS CAA 72 bp ACAATGAGGCCTCCATGGACTCCACTCCCTCGAAGATaGGGTGCATACTCTGCCAGGTCCACAGATCGTAAC +
Preference number: 6 (lower is better)
Translates to: TMRPPWTPLPRR*GAYSARSTDRN
Trigger: GTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528929.1
ENST00000529664.1
CDS TCA 72 bp CTGATTCAGTGCCCGATGATGTGGATGAGAGGTCATTaGCCACAGCAGTGTCGTCCCAGCCACTTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: LIQCPMMWMRGH*PQQCRPSHFLC
Trigger: ACACAGAAAGTGGCTGGGACGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp TCACCAGGAATATCACGAGCCATCGAGTCTGTGTGCTaGTATGTCACTGCCCTCCCACAAAGTGGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SPGISRAIESVC*YVTALPQSGLQ
Trigger: CTGCAGACCACTTTGTGGGAGGGCAGTGACATATCAGCACACAGACTCGATGGCTCGTGATATTCCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530582.5
CDS GCA 72 bp TGCCTGAGCTCTTGCAGTAACTCCTCTGCTTTTCTCTaGTTCTCCTCCTGCTCTCTCTGCTCCTTCTCCATG +
Preference number: 6 (lower is better)
Translates to: CLSSCSNSSAFL*FSSCSLCSFSM
Trigger: CATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000525597.5
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 72 bp TCCAAGCTGTGTTCAAATTTCCCCACTTCCCTGGCCTaGGTCCTTCAGCCTCTCCCTAGACAGTTTCAGACA +
Preference number: 6 (lower is better)
Translates to: SKLCSNFPTSLA*VLQPLPRQFQT
Trigger: TGTCTGAAACTGTCTAGGGAGAGGCTGAAGGACGCAGGCCAGGGAAGTGGGGAAATTTGAACACAGCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532926.5
ENST00000684215.1
CDS CCA 72 bp AGAACTCCAAGCTGTGTTCAAATTTCCCCACTTCCCTaGCCTGCGTCCTTCAGCCTCTCCCTAGACAGTTTC +
Preference number: 6 (lower is better)
Translates to: RTPSCVQISPLP*PASFSLSLDSF
Trigger: GAAACTGTCTAGGGAGAGGCTGAAGGACGCAGGCCAGGGAAGTGGGGAAATTTGAACACAGCTTGGAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532926.5
ENST00000684215.1
CDS CCA 72 bp TTCAGCTCAGACACTTCAGTCATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGGCTTAGCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: FSSDTSVIRSSF*VSRDVRLSSSC
Trigger: GCAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS CAA 72 bp GTGGCTCCTGAAAGCTTCCCAGGTAAAGTGGGATATTaGTGCTCCGCCAAGAAAGGGCTGTCCTTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: VAPESFPGKVGY*CSAKKGLSLGS
Trigger: AGAACCCAAGGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532381.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CAA 72 bp ATAATGAGGCCTCCATGGACTCCACTCCCTCGAAGATaGGGTGCATACTCTGCCAGGTCCACAGATCGTAAC +
Preference number: 6 (lower is better)
Translates to: IMRPPWTPLPRR*GAYSARSTDRN
Trigger: GTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp TTGGGATTCCGTTTACCATCTGGTGTCAGAGGAGACTaGGGACCTGATTCAGTGCCCGATGATGTGGATGAG +
Preference number: 6 (lower is better)
Translates to: LGFRLPSGVRGD*GPDSVPDDVDE
Trigger: CTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532172.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp TCTTTGGTGAGGCTGTCTCTCAGGATCTTCTCTGGATaGCATCCAAGCCACCACACTTCCTCATTTCCCCTC +
Preference number: 6 (lower is better)
Translates to: SLVRLSLRIFSG*HPSHHTSSFPL
Trigger: GAGGGGAAATGAGGAAGTGTGGTGGCTTGGATGTCATCCAGAGAAGATCCTGAGAGACAGCCTCACCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529664.1
CDS GCA 72 bp CAGTCATCAGATCGAGCTTCTGGGTCTCAAGAGATGTaGGGCTTAGCAGCTCCTGTTGAAGCATCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: QSSDRASGSQEM*GLAAPVEASLQ
Trigger: CTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000525597.5
ENST00000528883.5
ENST00000529575.5
ENST00000530189.1
ENST00000533792.5
ENST00000650027.1
ENST00000684123.1
ENST00000684215.1
CDS GCA 72 bp GCTCCTGAAAGCTTCCCAGGTAAAGTGGGATATTTGTaGTCCGCCAAGAAAGGGCTGTCCTTGGGTTCTAAC +
Preference number: 6 (lower is better)
Translates to: APESFPGKVGYL*SAKKGLSLGSN
Trigger: GTTAGAACCCAAGGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532381.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 72 bp GAGTTGCTGTTTGCTCATTCAGCAAATCTACACATGTaGCGAATGGCCATACACGCTGTGGAGAACAGGGGC +
Preference number: 6 (lower is better)
Translates to: ELLFAHSANLHM*RMAIHAVENRG
Trigger: GCCCCTGTTCTCCACAGCGTGTATGGCCATTCGGCACATGTGTAGATTTGCTGAATGAGCAAACAGCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS GCA 72 bp CCCTCTGCCACTCTCAACGTTCAGGTTGGTTTCACCTaGTGTATAAACACCGTACAACTGAGCAGCCAATCC +
Preference number: 6 (lower is better)
Translates to: PSATLNVQVGFT*CINTVQLSSQS
Trigger: GGATTGGCTGCTCAGTTGTACGGTGTTTATACAGCAGGTGAAACCAACCTGAACGTTGAGAGTGGCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS GCA 72 bp AGCTCCTTGGCCAGACTCAAGCCTCAATTCGGATCCTaGCTCTGGGATTTGGTCACTTGCCATAGAAGTCAA +
Preference number: 6 (lower is better)
Translates to: SSLARLKPQFGS*LWDLVTCHRSQ
Trigger: TTGACTTCTATGGCAAGTGACCAAATCCCAGAGGCAGGATCCGAATTGAGGCTTGAGTCTGGCCAAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS CCA 72 bp TTCAGCTCAGACACTTCAGTCATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGGCTTAGCAGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: FSSDTSVIRSSF*VSRDVRLSSSC
Trigger: ACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000525597.5
ENST00000528883.5
ENST00000529575.5
ENST00000530189.1
ENST00000533792.5
ENST00000650027.1
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp ATTTCTGCATCTTTCAGGGCCACCTGTTCTTGCAGCTaGGCGACTTCAGCCTTAGTGGCCTTTAGCTTCCAT +
Preference number: 6 (lower is better)
Translates to: ISASFRATCSCS*ATSALVAFSFH
Trigger: ATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGTGGCCCTGAAAGATGCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000650027.1
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp GTGAAAATCCTAGTTTCCTTGGCCGGACTTTGGCTGTaGTGGTCAGTGGTGTGTAAGCTGGTGAGGCCATTT +
Preference number: 6 (lower is better)
Translates to: VKILVSLAGLWL*WSVVCKLVRPF
Trigger: AAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000534552.1
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp TGTTTGCTCATTCAGCAAATCTACACATGTGCCGAATaGCCATACACGCTGTGGAGAACAGGGGCACGGCTT +
Preference number: 6 (lower is better)
Translates to: CLLIQQIYTCAE*PYTLWRTGARL
Trigger: AAGCCGTGCCCCTGTTCTCCACAGCGTGTATGGCCATTCGGCACATGTGTAGATTTGCTGAATGAGCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528947.5
CDS CCA 72 bp CCTTACCAGGGAGTCTCGGCCACTGCTCTGATGACATaGGTCACGTTTACTGCTCTTGATAGACTCAAGAGT +
Preference number: 6 (lower is better)
Translates to: PYQGVSATALMT*VTFTALDRLKS
Trigger: ACTCTTGAGTCTATCAAGAGCAGTAAACGTGACCCATGTCATCAGAGCAGTGGCCGAGACTCCCTGGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528883.5
ENST00000529321.1
CDS CCA 72 bp CTTCCCTACCCCCTCTGCCACTCTCAACGTTCAGGTTaGTTTCACCTGCTGTATAAACACCGTACAACTGAG +
Preference number: 6 (lower is better)
Translates to: LPYPLCHSQRSG*FHLLYKHRTTE
Trigger: CTCAGTTGTACGGTGTTTATACAGCAGGTGAAACCAACCTGAACGTTGAGAGTGGCAGAGGGGGTAGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529321.1
CDS CAA 72 bp TCCAAGCCACCACACTTCCTCATTTCCCCTCTGGCTTaGCCACTGACAGATCTGAGTAGTGATAGGGATCCT +
Preference number: 6 (lower is better)
Translates to: SKPPHFLISPLA*PLTDLSSDRDP
Trigger: AGGATCCCTATCACTACTCAGATCTGTCAGTGGCAAAGCCAGAGGGGAAATGAGGAAGTGTGGTGGCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529664.1
CDS CAA 90 bp TTCCTCCCTGGGTGCAGCCATGGTGGATACATCATTATAGATGCCTaGCTCTTTCAAGATGCAAGGGGGTGTGGTAGGCTTATCAGTCCA +
Preference number: 6 (lower is better)
Translates to: FLPGCSHGGYIIIDA*LFQDARGCGRLISP
Trigger: TGGACTGATAAGCCTACCACACCCCCTTGCATCTTGAAAGAGCAAGGCATCTATAATGATGTATCCACCATGGCTGCACCCAGGGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS TCA 72 bp CTTGCTGAAACCTCCCTCCGGTTCTTCTTCATTGATTaGGAGAGTTCTCTCCGAAGGCCCTTGAGTGACCAT +
Preference number: 6 (lower is better)
Translates to: LAETSLRFFFID*ESSLRRPLSDH
Trigger: ATGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000532416.1
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp TTTTCACAGACCAGCAGAGAACTGGGACCTCTTTGGTaGGGCTGTCTCTCAGGATCTTCTCTGGATGACATC +
Preference number: 6 (lower is better)
Translates to: FSQTSRELGPLW*GCLSGSSLDDI
Trigger: GATGTCATCCAGAGAAGATCCTGAGAGACAGCCTCACCAAAGAGGTCCCAGTTCTCTGCTGGTCTGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529664.1
CDS GCA 72 bp AGCCAGTCCAGGCTCACAAGTACCATCACTAAGATCTaGACCTGTTTTAGTGCCTGCAATGATCCCGTCCAT +
Preference number: 6 (lower is better)
Translates to: SQSRLTSTITKI*TCFSACNDPVH
Trigger: ATGGACGGGATCATTGCAGGCACTAAAACAGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299492.9
ENST00000526046.1
ENST00000526873.5
ENST00000527790.5
ENST00000528947.5
ENST00000684123.1
CDS GCA 72 bp TCACTGATCACATTCAGAACCGACTCTGCTTTTCTCTaGTTCTCCTCCTGCTCTCTCTGCTCCTTCTCCATG +
Preference number: 6 (lower is better)
Translates to: SLITFRTDSAFL*FSSCSLCSFSM
Trigger: CATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGTCGGTTCTGAATGTGATCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650027.1
CDS CCA 72 bp AAAGGGCTGTCCTTGGGTTCTAACACCGGGAAGGGCTaGTTCCCATCCATACACTTATCCACAGATTCACTT +
Preference number: 6 (lower is better)
Translates to: KGLSLGSNTGKG*FPSIHLSTDSL
Trigger: AAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000532381.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp CCTGTGACTATCACTGACACCGTCACTGGGCTCCATTaGGCAAATGTAGTCCGTCGATTCATCGAACTTCTT +
Preference number: 6 (lower is better)
Translates to: PVTITDTVTGLH*ANVVRRFIELL
Trigger: AAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000529664.1
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000534552.1
ENST00000684123.1
ENST00000684215.1
CDS CAA 72 bp GGGTGCAGCCATGGTGGATACATCATTATAGATGCCTaGCTCTTTCAAGATGCAAGGGGGTGTGGTAGGCTT +
Preference number: 6 (lower is better)
Translates to: GCSHGGYIIIDA*LFQDARGCGRL
Trigger: AAGCCTACCACACCCCCTTGCATCTTGAAAGAGCAAGGCATCTATAATGATGTATCCACCATGGCTGCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS CAA 90 bp ACCCAAATGTGGTCTAGCAGTGCAGACTTCTCCTCCTGTTTGGTGTaGATGGCTTTCACTGCTAAAACAAGCTTCTTCCTGTGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: TQMWSSSADFSSCLV*MAFTAKTSFFLWSG
Trigger: CCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532112.1
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS CAA 90 bp CTTCACTCTGCATTTACCCAGGGCTCCCAGCTGCTCTCAGTTTATTaGGGACTGGGGAGAAGACTAAAAATAAGTGCTGCTCTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: LHSAFTQGSQLLSVY*GLGRRLKISAALGG
Trigger: TCCTCCAAGAGCAGCACTTATTTTTAGTCTTCTCCCCAGTCCCAAATAAACTGAGAGCAGCTGGGAGCCCTGGGTAAATGCAGAGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS CCA 72 bp TTCAGCTCAGACACTTCAGTCATCAGATCGAGCTTCTaGGTCTCAAGAGATGTGCGGCTTAGCAGCTCTTTA +
Preference number: 6 (lower is better)
Translates to: FSSDTSVIRSSF*VSRDVRLSSSL
Trigger: TAAAGAGCTGCTAAGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530181.5
CDS CAA 72 bp GCATTTACCCAGGGCTCCCAGCTGCTCTCAGTTTATTaGGGACTGGGGAGAAGACTAAAAATAAGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: AFTQGSQLLSVY*GLGRRLKISAA
Trigger: AGCAGCACTTATTTTTAGTCTTCTCCCCAGTCCCAAATAAACTGAGAGCAGCTGGGAGCCCTGGGTAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS CAA 72 bp GCCCCAGTTTCTGCCTCATGTCACAAAGTGGATCAGTaGGGCCAGCAAGTACTTGGCTTTCAAAGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: APVSASCHKVDQ*GQQVLGFQRFF
Trigger: GAAAAACCTTTGAAAGCCAAGTACTTGCTGGCCCAACTGATCCACTTTGTGACATGAGGCAGAAACTGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS CAA 90 bp CTTGTCACCCAAATGTGGTCTAGCAGTGCAGACTTCTCCTCCTGTTaGGTGTTGATGGCTTTCACTGCTAAAACAAGCTTCTTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: LVTQMWSSSADFSSC*VLMAFTAKTSFFLW
Trigger: CCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532112.1
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp GGTCTAGCAGTGCAGACTTCTCCTCCTGTTTGGTGTTaGTGGCTTTCACTGCTAAAACAAGCTTCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: GLAVQTSPPVWC*WLSLLKQASSC
Trigger: ACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000532112.1
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp GATTTGGTCACTTGCCATAGAAGTCAAAGCAAAGTTTaGTGCCTTGTAGGAGGCCCCAGTTTCTGCCTCATG +
Preference number: 6 (lower is better)
Translates to: DLVTCHRSQSKV*CLVGGPSFCLM
Trigger: CATGAGGCAGAAACTGGGGCCTCCTACAAGGCATCAAACTTTGCTTTGACTTCTATGGCAAGTGACCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS GCA 72 bp AACTCTTCCACTTTGATTTTGAGGTGCCTGAGCTCTTaGAGTAACTCCTCTGCTTTTCTCTGCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: NSSTLILRCLSS*SNSSAFLCFSS
Trigger: GGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000525597.5
ENST00000528883.5
ENST00000529575.5
ENST00000530181.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS GCA 72 bp AGTTTATTTGGGACTGGGGAGAAGACTAAAAATAAGTaGTGCTCTTGGAGGAGCTCACTGGTTCCCACACAC +
Preference number: 6 (lower is better)
Translates to: SLFGTGEKTKNK*CSWRSSLVPTH
Trigger: GTGTGTGGGAACCAGTGAGCTCCTCCAAGAGCAGCACTTATTTTTAGTCTTCTCCCCAGTCCCAAATAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532926.5
CDS CCA 72 bp CCTTTTAGGGAGACATTTCCTCCCTGGGTGCAGCCATaGTGGATACATCATTATAGATGCCTTGCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: PFRETFPPWVQP*WIHHYRCLALS
Trigger: TGAAAGAGCAAGGCATCTATAATGATGTATCCACCATGGCTGCACCCAGGGAGGAAATGTCTCCCTAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS CAA 72 bp GCACCAACTTACTTTCCCCAGAACTTCTTAATGCCTTaGGGATTCCGTTTACCATCTGGTGTCAGAGGAGAC +
Preference number: 6 (lower is better)
Translates to: APTYFPQNFLMP*GFRLPSGVRGD
Trigger: GTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAGTAAGTTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS TCA 72 bp GTGTGTGGAATGGGTGGGTGCTTAGGATGCATGACATaGAAGGCAACTGGATATATTCAATGGGTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: VCGMGGCLGCMT*KATGYIQWVSF
Trigger: GAAAGACACCCATTGAATATATCCAGTTGCCTTTCATGTCATGCATCCTAAGCACCCACCCATTCCACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS CCA 72 bp TTTAGGGAGACATTTCCTCCCTGGGTGCAGCCATGGTaGATACATCATTATAGATGCCTTGCTCTTTCAAGA +
Preference number: 6 (lower is better)
Translates to: FRETFPPWVQPW*IHHYRCLALSR
Trigger: TCTTGAAAGAGCAAGGCATCTATAATGATGTATCCACCATGGCTGCACCCAGGGAGGAAATGTCTCCCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532381.1
CDS CAA 72 bp GTTCTTCGGATTTTTCCCCAGAACTTCTTAATGCCTTaGGGATTCCGTTTACCATCTGGTGTCAGAGGAGAC +
Preference number: 6 (lower is better)
Translates to: VLRIFPQNFLMP*GFRLPSGVRGD
Trigger: GTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAAATCCGAAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530081.1
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CCA 72 bp GGGTGGGTGCTTAGGATGCATGACATGAAAGGCAACTaGATATATTCAATGGGTGTCTTTCATACTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GWVLRMHDMKGN*IYSMGVFHTSP
Trigger: AGGAGAAGTATGAAAGACACCCATTGAATATATCCAGTTGCCTTTCATGTCATGCATCCTAAGCACCCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532172.1
CDS TCA 72 bp AGGTATTGCAGCATTCGTCTGTCAACTCTAGATTCATaGAACTGGTCTTTGTACTGGGGTAAGCCAATATCA +
Preference number: 6 (lower is better)
Translates to: RYCSIRLSTLDS*NWSLYWGKPIS
Trigger: TGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACAGACGAATGCTGCAATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000524495.5
ENST00000528883.5
ENST00000530181.5
ENST00000530582.5
ENST00000533792.5
ENST00000684123.1
ENST00000684215.1
CDS TCA 72 bp GCAGGAAAACAGCATATTCCTGTTAGTGGGAGAGCCTaGGGTTCTGAATCTAATCATGTCTCACAAACAAAA +
Preference number: 6 (lower is better)
Translates to: AGKQHIPVSGRA*GSESNHVSQTK
Trigger: TTTTGTTTGTGAGACATGATTAGATTCAGAACCTCAGGCTCTCCCACTAACAGGAATATGCTGTTTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532112.1
CDS CAA 72 bp AATAATTCTTCAGGGTCCTTATTTGTAGCGTTCCACTaGCTGAAACCTCCCTCCGGTTCTTCTTCATTGATT +
Preference number: 6 (lower is better)
Translates to: NNSSGSLFVAFH*LKPPSGSSSLI
Trigger: AATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAAATAAGGACCCTGAAGAATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000532416.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1
CDS CAA 90 bp TCTTGTTTAAATAATTCTTCAGGGTCCTTATTTGTAGCGTTCCACTaGCTGAAACCTCCCTCCGGTTCTTCTTCATTGATTGAGAGAGTT +
Preference number: 6 (lower is better)
Translates to: SCLNNSSGSLFVAFH*LKPPSGSSSLIERV
Trigger: AACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299492.9
ENST00000528883.5
ENST00000530181.5
ENST00000532416.1
ENST00000533792.5
ENST00000534409.5
ENST00000684123.1
ENST00000684215.1