RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPFIBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000110841

Ensembl transcript IDs: ENST00000228425.11, ENST00000318304.12, ENST00000535575.1, ENST00000537261.1, ENST00000537927.5, ENST00000538433.5, ENST00000539326.1, ENST00000540114.5, ENST00000540256.1, ENST00000540503.1, ENST00000541633.5, ENST00000542187.1, ENST00000542629.5, ENST00000545334.5, ENST00000545381.5, ENST00000619325.1

Found 561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGAAGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTaGCACTTCGTTTACGATCTTCAGATATCCCAACAACGCACACAA +
Preference number: 1 (lower is better)
Translates to: GEGWHAGVQYLGWVH*HFVYDLQISQQRTQ
Trigger: TTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAACGAAGTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR GCA 90 bp TGCAATGTACAATGCCAGGACATTCCTGCCCTGCACTCTGAGGGATaGTGCACACGTCTAGGTCCTCTCAAAGCTATTCACACAGTGAGT +
Preference number: 1 (lower is better)
Translates to: CNVQCQDIPALHSEG*CTRLGPLKAIHTVS
Trigger: ACTCACTGTGTGAATAGCTTTGAGAGGACCTAGACGTGTGCAGCATCCCTCAGAGTGCAGGGCAGGAATGTCCTGGCATTGTACATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR CCA 90 bp GGAGGCTGGGGGAAATGTAAGCATGGAGAACGGACTGCAAGGACCTaGGAGTTAGTGTGTGGTAATATGCACTTCAAGGCTGAAAGAGCT +
Preference number: 1 (lower is better)
Translates to: GGWGKCKHGERTART*ELVCGNMHFKAERA
Trigger: AGCTCTTTCAGCCTTGAAGTGCATATTACCACACACTAACTCCCAGGTCCTTGCAGTCCGTTCTCCATGCTTACATTTCCCCCAGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR GCA 90 bp AATGTACAATGCCAGGACATTCCTGCCCTGCACTCTGAGGGATGCTaGACACGTCTAGGTCCTCTCAAAGCTATTCACACAGTGAGTGTT +
Preference number: 1 (lower is better)
Translates to: NVQCQDIPALHSEGC*TRLGPLKAIHTVSV
Trigger: AACACTCACTGTGTGAATAGCTTTGAGAGGACCTAGACGTGTGCAGCATCCCTCAGAGTGCAGGGCAGGAATGTCCTGGCATTGTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR CCA 90 bp CAAAATGAAATGCAGATCAGACTCCTCCTCGCCAAATACACACCGTaGAGGAGAGGCATGCGGCACACAGTGCTTCTGATGTTACACACA +
Preference number: 1 (lower is better)
Translates to: QNEMQIRLLLAKYTP*RRGMRHTVLLMLHT
Trigger: TGTGTGTAACATCAGAAGCACTGTGTGCCGCATGCCTCTCCTCCACGGTGTGTATTTGGCGAGGAGGAGTCTGATCTGCATTTCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR TCA 90 bp TGCAAAGGCTCTGAGGCCAGTGTACCTGGCATGTTTAAGAATCAGTaGAAAAGCCACTGTGCTTGGCGTGGAGCGAATAAGGAGATGTGT +
Preference number: 1 (lower is better)
Translates to: CKGSEASVPGMFKNQ*KSHCAWRGANKEMC
Trigger: ACACATCTCCTTATTCGCTCCACGCCAAGCACAGTGGCTTTTTCACTGATTCTTAAACATGCCAGGTACACTGGCCTCAGAGCCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR TCA 90 bp ACAACGCACACAATCACACGCAGCCCAATGGAGAGAACACAGAGATaGCAAAATGAAATGCAGATCAGACTCCTCCTCGCCAAATACACA +
Preference number: 1 (lower is better)
Translates to: TTHTITRSPMERTQR*QNEMQIRLLLAKYT
Trigger: TGTGTATTTGGCGAGGAGGAGTCTGATCTGCATTTCATTTTGTCATCTCTGTGTTCTCTCCATTGGGCTGCGTGTGATTGTGTGCGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR TCA 90 bp AGCAGAAGGTGGAAAGAACACTCCGGAATAGAGAACTACATTTTCTaGTTGCTGTCAGATCGCTTTCTAGAGATCACAGATGCCAAGAGC +
Preference number: 1 (lower is better)
Translates to: SRRWKEHSGIENYIF*LLSDRFLEITDAKS
Trigger: GCTCTTGGCATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAGAAAATGTAGTTCTCTATTCCGGAGTGTTCTTTCCACCTTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR TCA 90 bp GACATTTATATCGATAGAGAGAGAAGTCCCGTTTGCTGGTCCATGTaGATAGATAGGTGGATATCTATACAAGGTAACAGCACCTTTTGG +
Preference number: 1 (lower is better)
Translates to: DIYIDRERSPVCWSM*IDRWISIQGNSTFW
Trigger: CCAAAAGGTGCTGTTACCTTGTATAGATATCCACCTATCTATTCACATGGACCAGCAAACGGGACTTCTCTCTCTATCGATATAAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR TCA 90 bp ATTTTAGGTCTTTCCGCTAAGTTTATACCACAGGAGAGAGCAGGGTaGGAGTCTATATATCTTCACAACACTAAATTAAATCCACGGAGG +
Preference number: 1 (lower is better)
Translates to: ILGLSAKFIPQERAG*ESIYLHNTKLNPRR
Trigger: CCTCCGTGGATTTAATTTAGTGTTGTGAAGATATATAGACTCTCACCCTGCTCTCTCCTGTGGTATAAACTTAGCGGAAAGACCTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR TCA 90 bp GCTGGTGAAGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTGGCACGGCACACAGTGCTTCTaGTGTTACACACAGGCTCAA +
Preference number: 2 (lower is better)
Translates to: AGEGWHAGVQYLGWVHWHGTQCF*CYTQAQ
Trigger: TTGAGCCTGTGTGTAACATCAGAAGCACTGTGTGCC...GTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCTTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR CCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGATGGTGGTGCATGCCTaGAGTCCCACCTACTTGGGG +
Preference number: 2 (lower is better)
Translates to: SPVADTEPPTSTSICENLMVVHA*SPTYLG
Trigger: CCCCAAGTAGGTGGGACTCCAGGCATGCACCACCAT...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
3UTR-3UTR CCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGAAGTGGAGGTGTGGCTaGCATTTAGTGGGCACACTG +
Preference number: 2 (lower is better)
Translates to: SPVADTEPPTSTSICENLKWRCG*HLVGTL
Trigger: CAGTGTGCCCACTAAATGCCAGCCACACCTCCACTT...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
3UTR-3UTR CCA 90 bp GAACGGACTGCAAGGACCTGGGAGTTAGTGTGTGGTAATATGCACTTCAAGGCTGTACAATACCTAGGGTaGGTGCACTGGCACTTCGTT +
Preference number: 2 (lower is better)
Translates to: ERTARTWELVCGNMHFKAVQYLG*VHWHFV
Trigger: AACGAAGTGCCAGTGCACCCACCCTAGGTATTGTAC...AGCCTTGAAGTGCATATTACCACACACTAACTCCCAGGTCCTTGCAGTCCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR TCA 90 bp GTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCCCAATGGCAGGAGAGAGCAGGGTaGGAGTCTATATATCTTCAC +
Preference number: 2 (lower is better)
Translates to: VYDLQISQQRTQSHAAQWQERAG*ESIYLH
Trigger: GTGAAGATATATAGACTCTCACCCTGCTCTCTCCTG...CCATTGGGCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR GCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGAGTGGGCACACTGAATaGTTAAAGAAGTTCCACATA +
Preference number: 2 (lower is better)
Translates to: SPVADTEPPTSTSICENLSGHTE*LKKFHI
Trigger: TATGTGGAACTTCTTTAAGCATTCAGTGTGCCCACT...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
3UTR-3UTR GCA 90 bp GTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCCCAATGGGATGACAAAATGAAATaGAGATCAGACTCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: VYDLQISQQRTQSHAAQWDDKMK*RSDSSS
Trigger: CGAGGAGGAGTCTGATCTGCATTTCATTTTGTCATC...CCATTGGGCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR CCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGAAATCATTCACATCCTaGTTACTGTTCCTCAAATCC +
Preference number: 2 (lower is better)
Translates to: SPVADTEPPTSTSICENLKSFTS*LLFLKS
Trigger: GGATTTGAGGAACAGTAACCAGGATGTGAATGATTT...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
3UTR-3UTR CCA 90 bp GTGTTCATTCTAGACATTTATATCGATAGAGAGAGAAGTCCCGTTTGCTGGTCCATCCTTCAACCACGATaGCTACAGGTGCCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: VFILDIYIDRERSPVCWSILQPR*LQVPLK
Trigger: TTTCAGGGGCACCTGTAGCCATCGTGGTTGAAGGAT...GGACCAGCAAACGGGACTTCTCTCTCTATCGATATAAATGTCTAGAATGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR TCA 90 bp GCACTGGCACTTCGTTTACGATCTTCAGATATCCCAACAACGCACACAATCACAACAGAGATGACAAAATaGAATGCAGATCAGACTCCT +
Preference number: 2 (lower is better)
Translates to: ALALRLRSSDIPTTHTITTEMTK*NADQTP
Trigger: AGGAGTCTGATCTGCATTTCATTTTGTCATCTCTGT...TGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAACGAAGTGCCAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR TCA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAGCCTCACTGAGAGCATaGCTTTTGAGTAAACACCAG +
Preference number: 2 (lower is better)
Translates to: ITNITTEPGILLSTRDTVASLRA*LLSKHQ
Trigger: CTGGTGTTTACTCAAAAGTCATGCTCTCAGTGAGGC...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR-3UTR TCA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTACTGTGGTTTTTACTCTaGGTAAGATGTGATGCCACT +
Preference number: 2 (lower is better)
Translates to: ITNITTEPGILLSTRDTVLWFLL*VRCDAT
Trigger: AGTGGCATCACATCTTACTCAGAGTAAAAACCACAG...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR-3UTR GCA 90 bp GACTTTGAGCAGGATATAAATAACTCCCACAAGCTTAGCGTTCCAATAATGGAACTTCCGGTCAAATACTaGTGTAAATCCTGTTGCTTT +
Preference number: 2 (lower is better)
Translates to: DFEQDINNSHKLSVPIMELPVKY*CKSCCF
Trigger: AAAGCAACAGGATTTACAGCAGTATTTGACCGGAAG...TTCCATTATTGGAACGCTAAGCTTGTGGGAGTTATTTATATCCTGCTCAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR-3UTR TCA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTATGTTTAAGAATCAGTaGAAAAGCCACTGTGCTTGG +
Preference number: 2 (lower is better)
Translates to: NITTEPGILLSTRDTVIFMFKNQ*KSHCAW
Trigger: CCAAGCACAGTGGCTTTTTCACTGATTCTTAAACAT...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR-3UTR TCA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATAAGGGCAAAAATCTaGTTCCTGATGCTTACATTC +
Preference number: 2 (lower is better)
Translates to: ITNITTEPGILLSTRDTVIRAKI*FLMLTF
Trigger: GAATGTAAGCATCAGGAATCAGATTTTTGCCCTTAT...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR-3UTR TCA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTCAAAAATCTGATTCCTaGTGCTTACATTCCAATTGG +
Preference number: 2 (lower is better)
Translates to: NITTEPGILLSTRDTVIFQKSDS*CLHSNW
Trigger: CCAATTGGAATGTAAGCATCAGGAATCAGATTTTTG...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR CAA 90 bp TCTATATATCTTCACAACACTAAATTAAATCCACGGAGGCATTTTTaGCTAAATTCCCCTAAGTCATTCACCTTCGTTTCTGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: SIYLHNTKLNPRRHF*LNSPKSFTFVSEKE
Trigger: CTCTTTCTCAGAAACGAAGGTGAATGACTTAGGGGAATTTAGCAAAAAATGCCTCCGTGGATTTAATTTAGTGTTGTGAAGATATATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR CCA 72 bp ATGCAGATCAGACTCCTCCTCGCCAAATACACACCGTaGAGGAGAGGCATGCGGCACACAGTGCTTCTGATG +
Preference number: 3 (lower is better)
Translates to: MQIRLLLAKYTP*RRGMRHTVLLM
Trigger: CATCAGAAGCACTGTGTGCCGCATGCCTCTCCTCCACGGTGTGTATTTGGCGAGGAGGAGTCTGATCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR GCA 72 bp CAATGCCAGGACATTCCTGCCCTGCACTCTGAGGGATaGTGCACACGTCTAGGTCCTCTCAAAGCTATTCAC +
Preference number: 3 (lower is better)
Translates to: QCQDIPALHSEG*CTRLGPLKAIH
Trigger: GTGAATAGCTTTGAGAGGACCTAGACGTGTGCAGCATCCCTCAGAGTGCAGGGCAGGAATGTCCTGGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR CCA 72 bp CCAGGAGAATGTGAGGGAGCTAGCCATGCAAATATCTaGCGAAAGAGCTTTCCAGGCAGAGTGAAAAGCCAG +
Preference number: 3 (lower is better)
Translates to: PGECEGASHANI*RKSFPGRVKSQ
Trigger: CTGGCTTTTCACTCTGCCTGGAAAGCTCTTTCGCCAGATATTTGCATGGCTAGCTCCCTCACATTCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR CCA 72 bp TGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTaGCACTTCGTTTACGATCTTCAGATATCCCAACAA +
Preference number: 3 (lower is better)
Translates to: WHAGVQYLGWVH*HFVYDLQISQQ
Trigger: TTGTTGGGATATCTGAAGATCGTAAACGAAGTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR TCA 72 bp TCTGAGGCCAGTGTACCTGGCATGTTTAAGAATCAGTaGAAAAGCCACTGTGCTTGGCGTGGAGCGAATAAG +
Preference number: 3 (lower is better)
Translates to: SEASVPGMFKNQ*KSHCAWRGANK
Trigger: CTTATTCGCTCCACGCCAAGCACAGTGGCTTTTTCACTGATTCTTAAACATGCCAGGTACACTGGCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR CCA 72 bp GGGAAATGTAAGCATGGAGAACGGACTGCAAGGACCTaGGAGTTAGTGTGTGGTAATATGCACTTCAAGGCT +
Preference number: 3 (lower is better)
Translates to: GKCKHGERTART*ELVCGNMHFKA
Trigger: AGCCTTGAAGTGCATATTACCACACACTAACTCCCAGGTCCTTGCAGTCCGTTCTCCATGCTTACATTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR CAA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGCTTTACAAAGAATATTaGGGCCCAGTGCTACAGAAA +
Preference number: 3 (lower is better)
Translates to: SPVADTEPPTSTSICENLLYKEY*GPVLQK
Trigger: TTTCTGTAGCACTGGGCCCAAATATTCTTTGTAAAG...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
3UTR GCA 72 bp CTGATTGCTGTCAGATCGCTTTCTAGAGATCACAGATaGCAAGAGCAGGGATTAGATTGGTTTGGAGCACAG +
Preference number: 3 (lower is better)
Translates to: LIAVRSLSRDHR*QEQGLDWFGAQ
Trigger: CTGTGCTCCAAACCAATCTAATCCCTGCTCTTGGCATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR CCA 72 bp AAAGGAACTTTCCCAATTCAAATCCTTCAACCACGATaGCTACAGGTGCCCCTGAAAATGCTGCCTAGCTTA +
Preference number: 3 (lower is better)
Translates to: KGTFPIQILQPR*LQVPLKMLPSL
Trigger: TAAGCTAGGCAGCATTTTCAGGGGCACCTGTAGCCATCGTGGTTGAAGGATTTGAATTGGGAAAGTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR CAA 90 bp CATTTTCTGATTGCTGTCAGATCGCTTTCTAGAGATCACAGATGCCAAGAGCAGCCACGGAGGCATTTTTaGCTAAATTCCCCTAAGTCA +
Preference number: 3 (lower is better)
Translates to: HFLIAVRSLSRDHRCQEQPRRHF*LNSPKS
Trigger: TGACTTAGGGGAATTTAGCAAAAAATGCCTCCGTGG...CTGCTCTTGGCATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR TCA 72 bp ATCGATAGAGAGAGAAGTCCCGTTTGCTGGTCCATGTaGATAGATAGGTGGATATCTATACAAGGTAACAGC +
Preference number: 3 (lower is better)
Translates to: IDRERSPVCWSM*IDRWISIQGNS
Trigger: GCTGTTACCTTGTATAGATATCCACCTATCTATTCACATGGACCAGCAAACGGGACTTCTCTCTCTATCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR CCA 72 bp AAGCAAAGCCTCTACAGAGTCCTTTTTAGCAGAAGGTaGAAAGAACACTCCGGAATAGAGAACTACATTTTC +
Preference number: 3 (lower is better)
Translates to: KQSLYRVLFSRR*KEHSGIENYIF
Trigger: GAAAATGTAGTTCTCTATTCCGGAGTGTTCTTTCCACCTTCTGCTAAAAAGGACTCTGTAGAGGCTTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR-3UTR CAA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTATTTTTAAATGAGACCTaGGCGATGACTTTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: ITNITTEPGILLSTRDTVFLNET*AMTLSR
Trigger: CCTGCTCAAAGTCATCGCCAAGGTCTCATTTAAAAA...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
3UTR TCA 72 bp TGGAAAGAACACTCCGGAATAGAGAACTACATTTTCTaGTTGCTGTCAGATCGCTTTCTAGAGATCACAGAT +
Preference number: 3 (lower is better)
Translates to: WKEHSGIENYIF*LLSDRFLEITD
Trigger: ATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAGAAAATGTAGTTCTCTATTCCGGAGTGTTCTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR TCA 72 bp CATATAATGTCCTACTTAGGTGGCTACAGTGAACACTaGTGTAACAAAATCATTCACATCCTGGTTACTGTT +
Preference number: 3 (lower is better)
Translates to: HIMSYLGGYSEH*CNKIIHILVTV
Trigger: AACAGTAACCAGGATGTGAATGATTTTGTTACATCAGTGTTCACTGTAGCCACCTAAGTAGGACATTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
3UTR TCA 72 bp AAACCTCCATTCATTGATAGCCTGAGAAATGTACAATaGACATGTTTAGGCAGACTGCTAGTATTTTGCTGT +
Preference number: 3 (lower is better)
Translates to: KPPFIDSLRNVQ*TCLGRLLVFCC
Trigger: ACAGCAAAATACTAGCAGTCTGCCTAAACATGTTCATTGTACATTTCTCAGGCTATCAATGAATGGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
3UTR TCA 72 bp CTTTCCGCTAAGTTTATACCACAGGAGAGAGCAGGGTaGGAGTCTATATATCTTCACAACACTAAATTAAAT +
Preference number: 3 (lower is better)
Translates to: LSAKFIPQERAG*ESIYLHNTKLN
Trigger: ATTTAATTTAGTGTTGTGAAGATATATAGACTCTCACCCTGCTCTCTCCTGTGGTATAAACTTAGCGGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp AGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTGGCACTTCGTTTACCTGCCCTGGGGGCCTaGGAGGAAGGGTCCCAAATG +
Preference number: 4 (lower is better)
Translates to: RLACRGTIPRVGALALRLPALGA*EEGSQM
Trigger: CATTTGGGACCCTTCCTCCCAGGCCCCCAGGGCAGG...TAAACGAAGTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp GCTGGTGAAGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTGGCACCTGCACTCTGAGGGATaGTGCACACGTCTAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AGEGWHAGVQYLGWVHWHLHSEG*CTRLGP
Trigger: AGGACCTAGACGTGTGCAGCATCCCTCAGAGTGCAG...GTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCTTCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp AGACTCCTCCTCGCCAAATACACACCGTGGAGGAGAGGCATGCGGCACACAGTGGCCAAATACACACCGTaGAGGAGAGGCATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: RLLLAKYTPWRRGMRHTVAKYTP*RRGMRH
Trigger: GTGCCGCATGCCTCTCCTCCACGGTGTGTATTTGGC...CACTGTGTGCCGCATGCCTCTCCTCCACGGTGTGTATTTGGCGAGGAGGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGTCGGGGCCCCGCGGTTaGCCTTGTCCCTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLSGPRG*PCPSSF
Trigger: AAAAGAGGAGGGACAAGGGCAACCGCGGGGCCCCGA...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCTGGTGAAGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTGGCACGAGCAGGGATTAGATTaGTTTGGAGCACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGEGWHAGVQYLGWVHWHEQGLD*FGAQCW
Trigger: CCAGCACTGTGCTCCAAACCAATCTAATCCCTGCTC...GTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCTTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp GCTGGTGAAGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTGGCACCGGACTGCAAGGACCTaGGAGTTAGTGTGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: AGEGWHAGVQYLGWVHWHRTART*ELVCGN
Trigger: ATTACCACACACTAACTCCCAGGTCCTTGCAGTCCG...GTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCTTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp AGACTCCTCCTCGCCAAATACACACCGTGGAGGAGAGGCATGCGGCACACAGTGCAGGAGAGAGCAGGGTaGGAGTCTATATATCTTCAC +
Preference number: 4 (lower is better)
Translates to: RLLLAKYTPWRRGMRHTVQERAG*ESIYLH
Trigger: GTGAAGATATATAGACTCTCACCCTGCTCTCTCCTG...CACTGTGTGCCGCATGCCTCTCCTCCACGGTGTGTATTTGGCGAGGAGGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGGGGTCCCAAATGGCCTaGTTTCTGCCGGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLGSQMA*FLPELC
Trigger: ACAGAGCTCCGGCAGAAAGCAGGCCATTTGGGACCC...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGGGGGCTGAAGCAGAATaGCTTGACCCAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLGAEAE*LDPGGG
Trigger: TCCACCTCCTGGGTCAAGCCATTCTGCTTCAGCCCC...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGAGGTGGAGGTTGCAGTaGGCCAAGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLRWRLQ*AKIMPW
Trigger: CCATGGCATGATCTTGGCTCACTGCAACCTCCACCT...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AAATGCAGATCAGACTCCTCCTCGCCAAATACACACCGTGGAGGAGAGGCATGCGGCTACAGGTGCCCCTaGAAATGCTGCCTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: KCRSDSSSPNTHRGGEACGYRCP*KCCLAY
Trigger: ATAAGCTAGGCAGCATTTTCAGGGGCACCTGTAGCC...GCATGCCTCTCCTCCACGGTGTGTATTTGGCGAGGAGGAGTCTGATCTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGTCGCTTCTGGTGCTGTaGCTCAGCCCCAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLSLLVL*LSPNQK
Trigger: CTTCTGATTGGGGCTGAGGCACAGCACCAGAAGCGA...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTGGCACTTCGTTTAGTACAATACCTAGGGTaGGTGCACTGGCACTTCGTT +
Preference number: 4 (lower is better)
Translates to: RLACRGTIPRVGALALRLVQYLG*VHWHFV
Trigger: AACGAAGTGCCAGTGCACCCACCCTAGGTATTGTAC...TAAACGAAGTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp AGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTGGCACTTCGTTTAATCCTTCAACCACGATaGCTACAGGTGCCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RLACRGTIPRVGALALRLILQPR*LQVPLK
Trigger: TTTCAGGGGCACCTGTAGCCATCGTGGTTGAAGGAT...TAAACGAAGTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp GCTGGTGAAGGCTGGCATGCAGGGGTACAATACCTAGGGTGGGTGCACTGGCACGAGAACTACATTTTCTaGTTGCTGTCAGATCGCTTT +
Preference number: 4 (lower is better)
Translates to: AGEGWHAGVQYLGWVHWHENYIF*LLSDRF
Trigger: AAAGCGATCTGACAGCAATCAGAAAATGTAGTTCTC...GTGCCAGTGCACCCACCCTAGGTATTGTACCCCTGCATGCCAGCCTTCACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp AGACTCCTCCTCGCCAAATACACACCGTGGAGGAGAGGCATGCGGCACACAGTGTATGCACTTCAAGGCTaGAAGAGCTGCAATGTACAA +
Preference number: 4 (lower is better)
Translates to: RLLLAKYTPWRRGMRHTVYALQG*KSCNVQ
Trigger: TTGTACATTGCAGCTCTTTCAGCCTTGAAGTGCATA...CACTGTGTGCCGCATGCCTCTCCTCCACGGTGTGTATTTGGCGAGGAGGAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGTTTCCCCACCCTGCCTaGACTACACCATGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLFPHPA*TTPCQE
Trigger: TTCCTGACATGGTGTAGTGCAGGCAGGGTGGGGAAA...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGGATGGAGGCGGTATCTaGAAGGGACTGTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLDGGGI*KGLFLC
Trigger: ACAGAGGAACAGTCCCTTCCAGATACCGCCTCCATC...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGTTGAGGACAGGAGTTTaGGACCAGGCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLLRTGV*DQAGQH
Trigger: ATGTTGTCCAGCCTGGTCTCAAACTCCTGTCCTCAA...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCCCAATGGCACTCTGAGGGATGCTaGACACGTCTAGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VYDLQISQQRTQSHAAQWHSEGC*TRLGPL
Trigger: GAGAGGACCTAGACGTGTGCAGCATCCCTCAGAGTG...CCATTGGGCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGCCTGCCCTGGGGGCCTaGGAGGAAGGGTCCCAAATG +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVPALGA*EEGSQM
Trigger: CATTTGGGACCCTTCCTCCCAGGCCCCCAGGGCAGG...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGGGGTTGTCATCCATaGAGGTGTCCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSRGCHP*RCPALG
Trigger: CCCCAGGGCAGGACACCTCCATGGATGACAACCCCT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CATTTTCTGATTGCTGTCAGATCGCTTTCTAGAGATCACAGATGCCAAGAGCAGAGGGGTTGTCATCCATaGAGGTGTCCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HFLIAVRSLSRDHRCQEQRGCHP*RCPALG
Trigger: CCCCAGGGCAGGACACCTCCATGGATGACAACCCCT...CTGCTCTTGGCATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGCTTCTGATGGGGCGATaGTATTCTCATCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLLLMGR*YSHQMA
Trigger: GGCCATCTGATGAGAATACCATCGCCCCATCAGAAG...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAGAGGCTCTAGAACCATaGGCCCACCATGGACACCAC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVEALEP*AHHGHH
Trigger: GTGGTGTCCATGGTGGGCTCATGGTTCTAGAGCCTC...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGCCCCAATCAGAAGGTTaGAATGAGTGGCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLPQSEG*NEWPNV
Trigger: GACATTTGGCCACTCATTTCAACCTTCTGATTGGGG...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CATTTTCTGATTGCTGTCAGATCGCTTTCTAGAGATCACAGATGCCAAGAGCAGGGGTCCCAAATGGCCTaGTTTCTGCCGGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HFLIAVRSLSRDHRCQEQGSQMA*FLPELC
Trigger: ACAGAGCTCCGGCAGAAAGCAGGCCATTTGGGACCC...CTGCTCTTGGCATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGTCGGGGCCCCGCGGTTaGCCTTGTCCCTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVSGPRG*PCPSSF
Trigger: AAAAGAGGAGGGACAAGGGCAACCGCGGGGCCCCGA...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGGCATCTCGCTTCTGGTaGTGTGCCTCAGCCCCAATC +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWASRFW*CASAPI
Trigger: GATTGGGGCTGAGGCACAGCACCAGAAGCGAGATGC...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp GCACTGGCACTTCGTTTACGATCTTCAGATATCCCAACAACGCACACAATCACAAGGACATTCCTGCCCTaGACTCTGAGGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALALRLRSSDIPTTHTITRTFLP*TLRDAA
Trigger: TGCAGCATCCCTCAGAGTGCAGGGCAGGAATGTCCT...TGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAACGAAGTGCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAGGAAGGGTCCCAAATaGCCTGCTTTCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWRKGPK*PAFCRS
Trigger: GCTCCGGCAGAAAGCAGGCCATTTGGGACCCTTCCT...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTACCTGCCCTGGGGGCCTaGGAGGAAGGGTCCCAAATG +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVPALGA*EEGSQM
Trigger: CATTTGGGACCCTTCCTCCCAGGCCCCCAGGGCAGG...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGTCCAGTGGCAGATACTaGACCGCCCACCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVSSGRY*TAHLHL
Trigger: GAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGA...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGTCCAGTGGCAGATACTaGACCGCCCACCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWSSGRY*TAHLHL
Trigger: GAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGA...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTCCAGTGGCAGATACTaGACCGCCCACCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECSSGRY*TAHLHL
Trigger: GAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGA...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGTCGGGGCCCCGCGGTTaGCCTTGTCCCTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKSGPRG*PCPSSF
Trigger: AAAAGAGGAGGGACAAGGGCAACCGCGGGGCCCCGA...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCATTGGGCGCATATTCTaGCAAGTCCACGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSIGRIF*QVHGAQ
Trigger: CTGCGCTCCGTGGACTTGGCAGAATATGCGCCCAAT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAATTGGGCGCATATTCTaGCAAGTCCACGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVIGRIF*QVHGAQ
Trigger: CTGCGCTCCGTGGACTTGGCAGAATATGCGCCCAAT...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATCGCTTCTGGTGCTGTaGCTCAGCCCCAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTSLLVL*LSPNQK
Trigger: CTTCTGATTGGGGCTGAGGCACAGCACCAGAAGCGA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp GTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCCCAATGGAGCTGCAATGTACAATaGCAGGACATTCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VYDLQISQQRTQSHAAQWSCNVQ*QDIPAL
Trigger: CAGGGCAGGAATGTCCTGGCATTGTACATTGCAGCT...CCATTGGGCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAATCCGGCAGCTCCATaGCATCTCGCTTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSNPAAP*HLASGA
Trigger: AGCACCAGAAGCGAGATGCCATGGAGCTGCCGGATT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAAATCCGGCAGCTCCATaGCATCTCGCTTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVNPAAP*HLASGA
Trigger: AGCACCAGAAGCGAGATGCCATGGAGCTGCCGGATT...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAAGGCAAGTGGAGGTGTaGCTGGCATTTAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVRQVEV*LAFSGH
Trigger: GTGCCCACTAAATGCCAGCCACACCTCCACTTGCCT...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCCTTGGGAAGCTGAGGTaGGAGAATGGCGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSLGKLR*ENGVNP
Trigger: TGGGTTCACGCCATTCTCCCACCTCAGCTTCCCAAG...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGCTTGGGAAGCTGAGGTaGGAGAATGGCGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWLGKLR*ENGVNP
Trigger: TGGGTTCACGCCATTCTCCCACCTCAGCTTCCCAAG...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCGTAGTCCCAGCTGCTTaGGAAGCTGAGGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSVVPAA*EAEVGE
Trigger: TTCTCCCACCTCAGCTTCCCAAGCAGCTGGGACTAC...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAGTAGTCCCAGCTGCTTaGGAAGCTGAGGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTVVPAA*EAEVGE
Trigger: TTCTCCCACCTCAGCTTCCCAAGCAGCTGGGACTAC...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCACTTCGTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCCTAGGGTGGGTGCACTaGCACTTCGTTTACGATCTT +
Preference number: 4 (lower is better)
Translates to: ALRLRSSDIPTTHTITRSLGWVH*HFVYDL
Trigger: AAGATCGTAAACGAAGTGCCAGTGCACCCACCCTAG...GCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAACGAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGAGATGGAACTGGAATTaGGCAGCTCTTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLRWNWN*AALHIL
Trigger: GAGAATATGAAGAGCTGCTCAATTCCAGTTCCATCT...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGGGCCAAAGGAAGATCTaGCTTTTCGAGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWGQRKI*LFECRR
Trigger: CCTTCGGCACTCGAAAAGTCAGATCTTCCTTTGGCC...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGGAGGCTCTAGAACCATaGGCCCACCATGGACACCAC +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVEALEP*AHHGHH
Trigger: GTGGTGTCCATGGTGGGCTCATGGTTCTAGAGCCTC...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGAGGTGGAGGTTGCAGTaGGCCAAGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSRWRLQ*AKIMPW
Trigger: CCATGGCATGATCTTGGCTCACTGCAACCTCCACCT...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTACACCGAGCTGGGAGCTaGCATCACTCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ITNITTEPGILLSTRDTVHRAGS*HHSQFQ
Trigger: CTGGAACTGGGAGTGATGTCAGCTCCCAGCTCGGTG...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR GCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATTTCCCCACCCTGCCTaGACTACACCATGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTFPHPA*TTPCQE
Trigger: TTCCTGACATGGTGTAGTGCAGGCAGGGTGGGGAAA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGGGGTCCCAAATGGCCTaGTTTCTGCCGGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWGSQMA*FLPELC
Trigger: ACAGAGCTCCGGCAGAAAGCAGGCCATTTGGGACCC...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAATTGGGCGCATATTCTaGCAAGTCCACGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGIGRIF*QVHGAQ
Trigger: CTGCGCTCCGTGGACTTGGCAGAATATGCGCCCAAT...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGGCATCTCGCTTCTGGTaGTGTGCCTCAGCCCCAATC +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVASRFW*CASAPI
Trigger: GATTGGGGCTGAGGCACAGCACCAGAAGCGAGATGC...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTCACGTTCTTTTATACTaGGGGGTGGAGAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCHVLLY*GVESRR
Trigger: CCGGCGGCTCTCCACCCCCCAGTATAAAAGAACGTG...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ATGGGAAACTCCATGATGAAGTCAAAGGGAATCATGATTTTAGGTCTTTCCGCTAGGAAGGGTCCCAAATaGCCTGCTTTCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: MGNSMMKSKGIMILGLSARKGPK*PAFCRS
Trigger: GCTCCGGCAGAAAGCAGGCCATTTGGGACCCTTCCT...AGCGGAAAGACCTAAAATCATGATTCCCTTTGACTTCATCATGGAGTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGAGGGGTTGTCATCCATaGAGGTGTCCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKRGCHP*RCPALG
Trigger: CCCCAGGGCAGGACACCTCCATGGATGACAACCCCT...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAGGGGTTGTCATCCATaGAGGTGTCCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLERGCHP*RCPALG
Trigger: CCCCAGGGCAGGACACCTCCATGGATGACAACCCCT...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGTTTCTTTTTGGAATCTaGAGATGGAGGCGGTATCTG +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLFLFGI*RWRRYL
Trigger: CAGATACCGCCTCCATCTCCAGATTCCAAAAAGAAA...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAGCCTGCAAAAGCGTTTaGCCAGATGCAATCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVACKSV*PDAIQC
Trigger: GCACTGGATTGCATCTGGCCAAACGCTTTTGCAGGC...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTCAGATCCCAGGGCTTaGAGTGCTAGCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWSDPRA*SASWSF
Trigger: GAAACTCCAGCTAGCACTCCAAGCCCTGGGATCTGA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGATGGCATCTCGCTTCTaGTGCTGTGCCTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVMASRF*CCASAP
Trigger: TGGGGCTGAGGCACAGCACCAGAAGCGAGATGCCAT...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAAGTGGAGGTGTGGCTaGCATTTAGTGGGCACACTG +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSKWRCG*HLVGTL
Trigger: CAGTGTGCCCACTAAATGCCAGCCACACCTCCACTT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAAAGTGGAGGTGTGGCTaGCATTTAGTGGGCACACTG +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTKWRCG*HLVGTL
Trigger: CAGTGTGCCCACTAAATGCCAGCCACACCTCCACTT...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGAGGCAAGTGGAGGTGTaGCTGGCATTTAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSRQVEV*LAFSGH
Trigger: GTGCCCACTAAATGCCAGCCACACCTCCACTTGCCT...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTGCCAAGATCATGCCATaGCACTCCAACCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSAKIMP*HSNLGD
Trigger: GTCACCCAGGTTGGAGTGCCATGGCATGATCTTGGC...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCGGGGCTGAAGCAGAATaGCTTGACCCAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSGAEAE*LDPGGG
Trigger: TCCACCTCCTGGGTCAAGCCATTCTGCTTCAGCCCC...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGGGGGCTGAAGCAGAATaGCTTGACCCAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVGAEAE*LDPGGG
Trigger: TCCACCTCCTGGGTCAAGCCATTCTGCTTCAGCCCC...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGATGGTGGTGCATGCCTaGAGTCCCACCTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVMVVHA*SPTYLG
Trigger: CCCCAAGTAGGTGGGACTCCAGGCATGCACCACCAT...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGATGGTGGTGCATGCCTaGAGTCCCACCTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWMVVHA*SPTYLG
Trigger: CCCCAAGTAGGTGGGACTCCAGGCATGCACCACCAT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATCTCCATCTTTGCCTTaGGCCAGTACCACCGTGTCT +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTSPSLP*ASTTVS
Trigger: AGACACGGTGGTACTGGCCCAAGGCAAAGATGGAGA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTGGGCAGGCACCGAGCTaGGAGCTGACATCACTCCCA +
Preference number: 4 (lower is better)
Translates to: NITTEPGILLSTRDTVIFGQAPS*ELTSLP
Trigger: TGGGAGTGATGTCAGCTCCCAGCTCGGTGCCTGCCC...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR CCA 90 bp CATTTTCTGATTGCTGTCAGATCGCTTTCTAGAGATCACAGATGCCAAGAGCAGAGTGCTGGTGAAGGCTaGCATGCAGGGGTACAATAC +
Preference number: 4 (lower is better)
Translates to: HFLIAVRSLSRDHRCQEQSAGEG*HAGVQY
Trigger: GTATTGTACCCCTGCATGCCAGCCTTCACCAGCACT...CTGCTCTTGGCATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTGGCCAAAGGAAGATCTaGCTTTTCGAGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSGQRKI*LFECRR
Trigger: CCTTCGGCACTCGAAAAGTCAGATCTTCCTTTGGCC...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GTGTTCATTCTAGACATTTATATCGATAGAGAGAGAAGTCCCGTTTGCTGGTCCGGCCAAAGGAAGATCTaGCTTTTCGAGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: VFILDIYIDRERSPVCWSGQRKI*LFECRR
Trigger: CCTTCGGCACTCGAAAAGTCAGATCTTCCTTTGGCC...GGACCAGCAAACGGGACTTCTCTCTCTATCGATATAAATGTCTAGAATGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATGGTTAGTCCACTTCTaGACTTCTGATGGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVWLVHF*TSDGAM
Trigger: CATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCA...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTGGTTAGTCCACTTCTaGACTTCTGATGGGGCGATG +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWWLVHF*TSDGAM
Trigger: CATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTAGGTGGAGGTTGCAGTaGGCCAAGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCRWRLQ*AKIMPW
Trigger: CCATGGCATGATCTTGGCTCACTGCAACCTCCACCT...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAAGCCAATTGCAAACCTaGTCCTTGGTCCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVSQLQT*SLVHLA
Trigger: TGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCT...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAAAGCGTTTGGCCAGATaGAATCCAGTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTKRLAR*NPVLAR
Trigger: TCTGGCAAGCACTGGATTGCATCTGGCCAAACGCTT...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGTCGCTTCTGGTGCTGTaGCTCAGCCCCAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVSLLVL*LSPNQK
Trigger: CTTCTGATTGGGGCTGAGGCACAGCACCAGAAGCGA...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAGCATCTCGCTTCTGGTaGTGTGCCTCAGCCCCAATC +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRASRFW*CASAPI
Trigger: GATTGGGGCTGAGGCACAGCACCAGAAGCGAGATGC...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTGCATCTCGCTTCTGGTaGTGTGCCTCAGCCCCAATC +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVASRFW*CASAPI
Trigger: GATTGGGGCTGAGGCACAGCACCAGAAGCGAGATGC...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp GAACGGACTGCAAGGACCTGGGAGTTAGTGTGTGGTAATATGCACTTCAAGGCTGATGACAAAATGAAATaGAGATCAGACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ERTARTWELVCGNMHFKADDKMK*RSDSSS
Trigger: CGAGGAGGAGTCTGATCTGCATTTCATTTTGTCATC...AGCCTTGAAGTGCATATTACCACACACTAACTCCCAGGTCCTTGCAGTCCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp GTGTTCATTCTAGACATTTATATCGATAGAGAGAGAAGTCCCGTTTGCTGGTCCGCATGGAGAACGGACTaGAAGGACCTGGGAGTTAGT +
Preference number: 4 (lower is better)
Translates to: VFILDIYIDRERSPVCWSAWRTD*KDLGVS
Trigger: ACTAACTCCCAGGTCCTTGCAGTCCGTTCTCCATGC...GGACCAGCAAACGGGACTTCTCTCTCTATCGATATAAATGTCTAGAATGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCACGTTCTTTTATACTaGGGGGTGGAGAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKHVLLY*GVESRR
Trigger: CCGGCGGCTCTCCACCCCCCAGTATAAAAGAACGTG...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACACGTTCTTTTATACTaGGGGGTGGAGAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLEHVLLY*GVESRR
Trigger: CCGGCGGCTCTCCACCCCCCAGTATAAAAGAACGTG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTAGGAAGGGTCCCAAATaGCCTGCTTTCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVRKGPK*PAFCRS
Trigger: GCTCCGGCAGAAAGCAGGCCATTTGGGACCCTTCCT...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAGGAAGGGTCCCAAATaGCCTGCTTTCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLERKGPK*PAFCRS
Trigger: GCTCCGGCAGAAAGCAGGCCATTTGGGACCCTTCCT...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGACTGTTTCAGCTAGGGTaGGTGCACTGGCACTTCGTT +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGLFQLG*VHWHFV
Trigger: AACGAAGTGCCAGTGCACCCACCCTAGCTGAAACAG...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228425.11
CDS-3UTR CCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCTTTGGAATCTGGAGATaGAGGCGGTATCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSFGIWR*RRYLEG
Trigger: CCCTTCCAGATACCGCCTCCATCTCCAGATTCCAAA...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAGCCTGCAAAAGCGTTTaGCCAGATGCAATCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGACKSV*PDAIQC
Trigger: GCACTGGATTGCATCTGGCCAAACGCTTTTGCAGGC...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATCAGATCCCAGGGCTTaGAGTGCTAGCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGSDPRA*SASWSF
Trigger: GAAACTCCAGCTAGCACTCCAAGCCCTGGGATCTGA...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCACCATGAGCCCACCATaGACACCACTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSTMSPP*TPLPLR
Trigger: TCTCAGAGGCAGTGGTGTCCATGGTGGGCTCATGGT...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGGCAGCAAAGTCTTATTaGGTGGGATGTTCAATAACT +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLAAKSY*VGCSIT
Trigger: AGTTATTGAACATCCCACCCAATAAGACTTTGCTGC...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAATGGCATCTCGCTTCTaGTGCTGTGCCTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRMASRF*CCASAP
Trigger: TGGGGCTGAGGCACAGCACCAGAAGCGAGATGCCAT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAATGGCATCTCGCTTCTaGTGCTGTGCCTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVMASRF*CCASAP
Trigger: TGGGGCTGAGGCACAGCACCAGAAGCGAGATGCCAT...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAATCCGGCAGCTCCATaGCATCTCGCTTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWNPAAP*HLASGA
Trigger: AGCACCAGAAGCGAGATGCCATGGAGCTGCCGGATT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGGCCAAGATCATGCCATaGCACTCCAACCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWAKIMP*HSNLGD
Trigger: GTCACCCAGGTTGGAGTGCCATGGCATGATCTTGGC...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCCTTGGGAAGCTGAGGTaGGAGAATGGCGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSLGKLR*ENGVNP
Trigger: TGGGTTCACGCCATTCTCCCACCTCAGCTTCCCAAG...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATTTTCTCCAGATCACTaGAACCCTGTGCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTFSPDH*NPVHPA
Trigger: TGCTGGATGCACAGGGTTTCAGTGATCTGGAGAAAA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTACATTACTGGAGTGGGTaGTGGACTTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVHYWSG*WTFLQI
Trigger: GATCTGGAGAAAAGTCCATCACCCACTCCAGTAATG...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGCGGAGCTCTGTCCTCTaGAGTCTTCTGAATAGTTTC +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWRSSVL*SLLNSF
Trigger: GAAACTATTCAGAAGACTTCAGAGGACAGAGCTCCG...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTACGGAGCTCTGTCCTCTaGAGTCTTCTGAATAGTTTC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVRSSVL*SLLNSF
Trigger: GAAACTATTCAGAAGACTTCAGAGGACAGAGCTCCG...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGGGCCAAAGGAAGATCTaGCTTTTCGAGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVGQRKI*LFECRR
Trigger: CCTTCGGCACTCGAAAAGTCAGATCTTCCTTTGGCC...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGTTTCTTTCGATGAAGTaGATGCTTGATTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SPVADTEPPTSTSICENLFLSMK*MLDSKF
Trigger: GAACTTGGAATCAAGCATTCACTTCATCGAAAGAAA...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACTGGGTCTTATATTaGGGGAGGCCAATGTCATCC +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWNWVLY*GRPMSS
Trigger: GGATGACATTGGCCTCCCTCAATATAAGACCCAGTT...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAACTGGGTCTTATATTaGGGGAGGCCAATGTCATCC +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSNWVLY*GRPMSS
Trigger: GGATGACATTGGCCTCCCTCAATATAAGACCCAGTT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTACCCCAATCAGAAGGTTaGAATGAGTGGCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVPQSEG*NEWPNV
Trigger: GACATTTGGCCACTCATTTCAACCTTCTGATTGGGG...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GTGTTCATTCTAGACATTTATATCGATAGAGAGAGAAGTCCCGTTTGCTGGTCCGGCACACAGTGCTTCTaGTGTTACACACAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: VFILDIYIDRERSPVCWSGTQCF*CYTQAQ
Trigger: TTGAGCCTGTGTGTAACATCAGAAGCACTGTGTGCC...GGACCAGCAAACGGGACTTCTCTCTCTATCGATATAAATGTCTAGAATGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGTTTCCCCACCCTGCCTaGACTACACCATGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWFPHPA*TTPCQE
Trigger: TTCCTGACATGGTGTAGTGCAGGCAGGGTGGGGAAA...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGGTCCTTTCCCCACCCTaGCTGCACTACACCATGTCA +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKVLSPP*LHYTMS
Trigger: TGACATGGTGTAGTGCAGGCAGGGTGGGGAAAGGAC...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCCTTAGAAGCTCCTGCTaGAGCATTTCTTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSLRSSC*SISSVA
Trigger: TGCCACAGAAGAAATGCTGCAGCAGGAGCTTCTAAG...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCCCAGATGCAATCCAGTaGTTGCCAGAATTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSPDAIQ*LPEFRY
Trigger: GTACCTGAATTCTGGCAAGCACTGGATTGCATCTGG...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAAAGCGTTTGGCCAGATaGAATCCAGTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGKRLAR*NPVLAR
Trigger: TCTGGCAAGCACTGGATTGCATCTGGCCAAACGCTT...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTATTGGGCGCATATTCTaGCAAGTCCACGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVIGRIF*QVHGAQ
Trigger: CTGCGCTCCGTGGACTTGGCAGAATATGCGCCCAAT...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGATCGCTTCTGGTGCTGTaGCTCAGCCCCAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRSLLVL*LSPNQK
Trigger: CTTCTGATTGGGGCTGAGGCACAGCACCAGAAGCGA...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAGTGAGCCAAGATCATaGCATGGCACTCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWSEPRS*HGTPTW
Trigger: CCAGGTTGGAGTGCCATGGCATGATCTTGGCTCACT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGACATATTCTCCATCTTTaGCTTGGGCCAGTACCACCG +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGHILHL*LGPVPP
Trigger: CGGTGGTACTGGCCCAAGGCAAAGATGGAGAATATG...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTCATATTCTCCATCTTTaGCTTGGGCCAGTACCACCG +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSHILHL*LGPVPP
Trigger: CGGTGGTACTGGCCCAAGGCAAAGATGGAGAATATG...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GACTTTGAGCAGGATATAAATAACTCCCACAAGCTTAGCGTTCCAATAATGGAAGCCTGGAAAAGCCAGTaGAAAGGCTCTGAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: DFEQDINNSHKLSVPIMEAWKSQ*KGSEAS
Trigger: ACTGGCCTCAGAGCCTTTGCACTGGCTTTTCCAGGC...TTCCATTATTGGAACGCTAAGCTTGTGGGAGTTATTTATATCCTGCTCAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR CCA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTCACGTTCTTTTATACTaGGGGGTGGAGAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: NITTEPGILLSTRDTVIFHVLLY*GVESRR
Trigger: CCGGCGGCTCTCCACCCCCCAGTATAAAAGAACGTG...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR CCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGATGGAGGCGGTATCTaGAAGGGACTGTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCDGGGI*KGLFLC
Trigger: ACAGAGGAACAGTCCCTTCCAGATACCGCCTCCATC...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCGCCTGCAAAAGCGTTTaGCCAGATGCAATCCAGTGC +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSACKSV*PDAIQC
Trigger: GCACTGGATTGCATCTGGCCAAACGCTTTTGCAGGC...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGTCAGATCCCAGGGCTTaGAGTGCTAGCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVSDPRA*SASWSF
Trigger: GAAACTCCAGCTAGCACTCCAAGCCCTGGGATCTGA...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAACCATGAGCCCACCATaGACACCACTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLETMSPP*TPLPLR
Trigger: TCTCAGAGGCAGTGGTGTCCATGGTGGGCTCATGGT...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAATGGCATCTCGCTTCTaGTGCTGTGCCTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQMASRF*CCASAP
Trigger: TGGGGCTGAGGCACAGCACCAGAAGCGAGATGCCAT...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGAATCCGGCAGCTCCATaGCATCTCGCTTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKNPAAP*HLASGA
Trigger: AGCACCAGAAGCGAGATGCCATGGAGCTGCCGGATT...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTAAGTGGAGGTGTGGCTaGCATTTAGTGGGCACACTG +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCKWRCG*HLVGTL
Trigger: CAGTGTGCCCACTAAATGCCAGCCACACCTCCACTT...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTAGGCAAGTGGAGGTGTaGCTGGCATTTAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVRQVEV*LAFSGH
Trigger: GTGCCCACTAAATGCCAGCCACACCTCCACTTGCCT...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGGCCAAGATCATGCCATaGCACTCCAACCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKAKIMP*HSNLGD
Trigger: GTCACCCAGGTTGGAGTGCCATGGCATGATCTTGGC...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAGTAGTCCCAGCTGCTTaGGAAGCTGAGGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRVVPAA*EAEVGE
Trigger: TTCTCCCACCTCAGCTTCCCAAGCAGCTGGGACTAC...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGTCTCCATCTTTGCCTTaGGCCAGTACCACCGTGTCT +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWSPSLP*ASTTVS
Trigger: AGACACGGTGGTACTGGCCCAAGGCAAAGATGGAGA...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CATTTTCTGATTGCTGTCAGATCGCTTTCTAGAGATCACAGATGCCAAGAGCAGGGGATTAGATTGGTTTaGAGCACAGTGCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HFLIAVRSLSRDHRCQEQGIRLV*STVLVK
Trigger: CTTCACCAGCACTGTGCTCCAAACCAATCTAATCCC...CTGCTCTTGGCATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATTGTCCCTCCTCTTTTaGATTCAGGCTCAGACATGT +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVLSLLF*IQAQTC
Trigger: ACATGTCTGAGCCTGAATTCAAAAGAGGAGGGACAA...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTGGTTAGTCCACTTCTaGACTTCTGATGGGGCGATG +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECWLVHF*TSDGAM
Trigger: CATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCA...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAATCAGAAGGTTGAAATaGGTGGCCAAATGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVIRRLK*VAKCLR
Trigger: GCGAAGACATTTGGCCACTCATTTCAACCTTCTGAT...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATCAGAAGGTTGAAATaGGTGGCCAAATGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWIRRLK*VAKCLR
Trigger: GCGAAGACATTTGGCCACTCATTTCAACCTTCTGAT...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGTGTGCGTCAGATTGTTaGTGCCTTCAGAGAATGCAC +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSCASDC*CLQRMH
Trigger: GTGCATTCTCTGAAGGCATCAACAATCTGACGCACA...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATGTGCGTCAGATTGTTaGTGCCTTCAGAGAATGCAC +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGCASDC*CLQRMH
Trigger: GTGCATTCTCTGAAGGCATCAACAATCTGACGCACA...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTAATTCAAGGCTGCAGTaGGCTATGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECNSRLQ*AMITPL
Trigger: CAGTGGCGTGATCATAGCTCACTGCAGCCTTGAATT...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCTTGAGGACAGGAGTTTaGGACCAGGCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSLRTGV*DQAGQH
Trigger: ATGTTGTCCAGCCTGGTCTCAAACTCCTGTCCTCAA...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GACTTTGAGCAGGATATAAATAACTCCCACAAGCTTAGCGTTCCAATAATGGAAGCTTTCCAGGCAGAGTaGAAAGCCAGTGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: DFEQDINNSHKLSVPIMEAFQAE*KASAWK
Trigger: TTTCCAGGCACTGGCTTTTCACTCTGCCTGGAAAGC...TTCCATTATTGGAACGCTAAGCTTGTGGGAGTTATTTATATCCTGCTCAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR TCA 90 bp GCACTTCGTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCACAGAGATGACAAAATaGAATGCAGATCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: ALRLRSSDIPTTHTITRSTEMTK*NADQTP
Trigger: AGGAGTCTGATCTGCATTTCATTTTGTCATCTCTGT...GCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAACGAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATCACTGAAACCCTGTaGATCCAGCAAAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWITETL*IQQRGD
Trigger: ATCTCCTCTTTGCTGGATGCACAGGGTTTCAGTGAT...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTAGCCAATTGCAAACCTaGTCCTTGGTCCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECSQLQT*SLVHLA
Trigger: TGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCT...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGTTCCATCAGCCAATTaGAAACCTGCTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCVPSAN*KPAPWS
Trigger: GGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAAC...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTATGCAATCCAGTGCTTaGCAGAATTCAGGTACGAGC +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSMQSSA*QNSGTS
Trigger: GCTCGTACCTGAATTCTGGCAAGCACTGGATTGCAT...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAGCGTTTGGCCAGATaGAATCCAGTGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWKRLAR*NPVLAR
Trigger: TCTGGCAAGCACTGGATTGCATCTGGCCAAACGCTT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAAGTGAGCCAAGATCATaGCATGGCACTCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVSEPRS*HGTPTW
Trigger: CCAGGTTGGAGTGCCATGGCATGATCTTGGCTCACT...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAAGTGAGCCAAGATCATaGCATGGCACTCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRSEPRS*HGTPTW
Trigger: CCAGGTTGGAGTGCCATGGCATGATCTTGGCTCACT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTTTTGGAATCTGGAGATaGAGGCGGTATCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCFGIWR*RRYLEG
Trigger: CCCTTCCAGATACCGCCTCCATCTCCAGATTCCAAA...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCTTTGGAATCTGGAGATaGAGGCGGTATCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSFGIWR*RRYLEG
Trigger: CCCTTCCAGATACCGCCTCCATCTCCAGATTCCAAA...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCTGCAAACCTGCTCCTTaGTCCACTTGGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSCKPAP*STWQMA
Trigger: TGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCA...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGTGCAAACCTGCTCCTTaGTCCACTTGGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWCKPAP*STWQMA
Trigger: TGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCA...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAACCATGAGCCCACCATaGACACCACTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQTMSPP*TPLPLR
Trigger: TCTCAGAGGCAGTGGTGTCCATGGTGGGCTCATGGT...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAACAATAAGAGGCAAGTaGAGGTGTGGCTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVTIRGK*RCGWHL
Trigger: TAAATGCCAGCCACACCTCCACTTGCCTCTTATTGT...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTTTCTCCAGATCACTaGAACCCTGTGCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECFSPDH*NPVHPA
Trigger: TGCTGGATGCACAGGGTTTCAGTGATCTGGAGAAAA...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGTTTTCTCCAGATCACTaGAACCCTGTGCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVFSPDH*NPVHPA
Trigger: TGCTGGATGCACAGGGTTTCAGTGATCTGGAGAAAA...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGCATTACTGGAGTGGGTaGTGGACTTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVHYWSG*WTFLQI
Trigger: GATCTGGAGAAAAGTCCATCACCCACTCCAGTAATG...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCCGGAGCTCTGTCCTCTaGAGTCTTCTGAATAGTTTC +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSRSSVL*SLLNSF
Trigger: GAAACTATTCAGAAGACTTCAGAGGACAGAGCTCCG...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTGGGACTGTTCCTCTGTaGATCTTTTGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVGTVPL*IFWPRR
Trigger: TCTTCTCGGCCAAAAGATTCACAGAGGAACAGTCCC...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAGGGACTGTTCCTCTGTaGATCTTTTGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRGTVPL*IFWPRR
Trigger: TCTTCTCGGCCAAAAGATTCACAGAGGAACAGTCCC...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAGGGACTGTTCCTCTGTaGATCTTTTGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLEGTVPL*IFWPRR
Trigger: TCTTCTCGGCCAAAAGATTCACAGAGGAACAGTCCC...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATTGGTTCAAAGTTATTaGTCCTCAGGACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGLVQSY*SSGPGW
Trigger: CCATCCAGGTCCTGAGGATCAATAACTTTGAACCAA...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACCACTTCTGAACTTCTaGTGGGGCGATGGTATTCTC +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRPLLNF*WGDGIL
Trigger: GAGAATACCATCGCCCCATCAGAAGTTCAGAAGTGG...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCCACTTCTGAACTTCTaGTGGGGCGATGGTATTCTC +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKPLLNF*WGDGIL
Trigger: GAGAATACCATCGCCCCATCAGAAGTTCAGAAGTGG...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTATGGTTAGTCCACTTCTaGACTTCTGATGGGGCGATG +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVWLVHF*TSDGAM
Trigger: CATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCA...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAATCAGAAGGTTGAAATaGGTGGCCAAATGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGIRRLK*VAKCLR
Trigger: GCGAAGACATTTGGCCACTCATTTCAACCTTCTGAT...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGCCCCAATCAGAAGGTTaGAATGAGTGGCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWPQSEG*NEWPNV
Trigger: GACATTTGGCCACTCATTTCAACCTTCTGATTGGGG...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGTGTGCGTCAGATTGTTaGTGCCTTCAGAGAATGCAC +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVCASDC*CLQRMH
Trigger: GTGCATTCTCTGAAGGCATCAACAATCTGACGCACA...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACACTACGGTCAAACGTTTaGGTCTTCATCTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTLRSNV*VFICNA
Trigger: AGCATTACAGATGAAGACTCAAACGTTTGACCGTAG...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCCTACGGTCAAACGTTTaGGTCTTCATCTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSLRSNV*VFICNA
Trigger: AGCATTACAGATGAAGACTCAAACGTTTGACCGTAG...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAATTCAAGGCTGCAGTaGGCTATGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLENSRLQ*AMITPL
Trigger: CAGTGGCGTGATCATAGCTCACTGCAGCCTTGAATT...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAAATTCAAGGCTGCAGTaGGCTATGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVNSRLQ*AMITPL
Trigger: CAGTGGCGTGATCATAGCTCACTGCAGCCTTGAATT...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTTGAGGACAGGAGTTTaGGACCAGGCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVLRTGV*DQAGQH
Trigger: ATGTTGTCCAGCCTGGTCTCAAACTCCTGTCCTCAA...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGCCACTTCTGAACTTCTaGTGGGGCGATGGTATTAAC +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWPLLNF*WGDGIN
Trigger: GTTAATACCATCGCCCCATCAGAAGTTCAGAAGTGG...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539326.1
CDS-3UTR GCA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTTTTCCCCACCCTGCCTaGACTACACCATGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: NITTEPGILLSTRDTVIFFPHPA*TTPCQE
Trigger: TTCCTGACATGGTGTAGTGCAGGCAGGGTGGGGAAA...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR GCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCCTTAGAAGCTCCTGCTaGAGCATTTCTTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSLRSSC*SISSVA
Trigger: TGCCACAGAAGAAATGCTGCAGCAGGAGCTTCTAAG...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTCTTAGAAGCTCCTGCTaGAGCATTTCTTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCLRSSC*SISSVA
Trigger: TGCCACAGAAGAAATGCTGCAGCAGGAGCTTCTAAG...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAGAAGGGATGGAAACTTaGAAGATGGTAGTATGGAAC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVEGMET*KMVVWN
Trigger: GTTCCATACTACCATCTTGCAAGTTTCCATCCCTTC...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTCCAGCCAGATCTAGGTaGTCTGCTGTCTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCPARSR*SAVSFS
Trigger: AGAAAAAGAGACAGCAGAGCACCTAGATCTGGCTGG...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGCCAGCCAGATCTAGGTaGTCTGCTGTCTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVPARSR*SAVSFS
Trigger: AGAAAAAGAGACAGCAGAGCACCTAGATCTGGCTGG...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAAGCCAATTGCAAACCTaGTCCTTGGTCCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRSQLQT*SLVHLA
Trigger: TGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAGTTCCATCAGCCAATTaGAAACCTGCTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVVPSAN*KPAPWS
Trigger: GGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAAC...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGATGCAATCCAGTGCTTaGCAGAATTCAGGTACGAGC +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWMQSSA*QNSGTS
Trigger: GCTCGTACCTGAATTCTGGCAAGCACTGGATTGCAT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCATGCAATCCAGTGCTTaGCAGAATTCAGGTACGAGC +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSMQSSA*QNSGTS
Trigger: GCTCGTACCTGAATTCTGGCAAGCACTGGATTGCAT...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTCCAGATGCAATCCAGTaGTTGCCAGAATTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECPDAIQ*LPEFRY
Trigger: GTACCTGAATTCTGGCAAGCACTGGATTGCATCTGG...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGATCCCATTACTGGAGTaGGTGATGGACTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSIPLLE*VMDFSP
Trigger: TGGAGAAAAGTCCATCACCCACTCCAGTAATGGGAT...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACACTTGTGTTAAATaGGTCACAACTGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWNTCVK*VTTGRS
Trigger: GGATCTCCCAGTTGTGACCCATTTAACACAAGTGTT...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACTAGGGTGGGTGCACTaGCACTTCGTTTACGATCTA +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLELGWVH*HFVYDL
Trigger: TAGATCGTAAACGAAGTGCCAGTGCACCCACCCTAG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228425.11
CDS-3UTR CCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAGATGGAGGCGGTATCTaGAAGGGACTGTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQDGGGI*KGLFLC
Trigger: ACAGAGGAACAGTCCCTTCCAGATACCGCCTCCATC...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGCAAACCTGCTCCTTaGTCCACTTGGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVCKPAP*STWQMA
Trigger: TGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCA...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACTTCTGATGGGGCGATaGTATTCTCATCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLELLMGR*YSHQMA
Trigger: GGCCATCTGATGAGAATACCATCGCCCCATCAGAAG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATATAATCAAGTCCAGTaGCAGATACTGAACCGCCCA +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGYNQVQ*QILNRP
Trigger: TGGGCGGTTCAGTATCTGCCACTGGACTTGATTATA...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCACTGGCACTTCGTTTACGATCTTCAGATATCCCAACAACGCACACAATCACAAGGGCAAAGGCATTTTaGTCATACGTACCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: ALALRLRSSDIPTTHTITRAKAF*SYVPKF
Trigger: AAACTTAGGTACGTATGACCAAAATGCCTTTGCCCT...TGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAACGAAGTGCCAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAAAGCGTTTCTGCTGTTaGATCTGGGATCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVKRFCC*IWDLAS
Trigger: AGATGCCAGATCCCAGATTCAACAGCAGAAACGCTT...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228425.11
ENST00000318304.12
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACATTACTGGAGTGGGTaGTGGACTTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRHYWSG*WTFLQI
Trigger: GATCTGGAGAAAAGTCCATCACCCACTCCAGTAATG...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTTTGTCCCTCCTCTTTTaGATTCAGGCTCAGACATGT +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCLSLLF*IQAQTC
Trigger: ACATGTCTGAGCCTGAATTCAAAAGAGGAGGGACAA...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTTCTCTAGATCTTGTTaGGAAGCCTGCAAAAGCGTT +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSFSRSC*EACKSV
Trigger: AACGCTTTTGCAGGCTTCTCAACAAGATCTAGAGAA...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAGATGAAGTGAATGCTTaGTTCCAAGTTCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVDEVNA*FQVPSL
Trigger: TAGAGAAGGAACTTGGAATCAAGCATTCACTTCATC...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATGGAGTTTCTTTCGATaGAGTGAATGCTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTWSFFR*SECLIP
Trigger: TGGAATCAAGCATTCACTTCATCGAAAGAAACTCCA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTTTGGTTCAAAGTTATTaGTCCTCAGGACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCLVQSY*SSGPGW
Trigger: CCATCCAGGTCCTGAGGATCAATAACTTTGAACCAA...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAACCACTTCTGAACTTCTaGTGGGGCGATGGTATTCTC +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQPLLNF*WGDGIL
Trigger: GAGAATACCATCGCCCCATCAGAAGTTCAGAAGTGG...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCGGGATGTTCAATAACTaGGCCATTGTTTCTACGTTA +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSGMFNN*AIVSTL
Trigger: TAACGTAGAAACAATGGCTCAGTTATTGAACATCCC...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTATGTGCGTCAGATTGTTaGTGCCTTCAGAGAATGCAC +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVCASDC*CLQRMH
Trigger: GTGCATTCTCTGAAGGCATCAACAATCTGACGCACA...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAGGCTACAGTGAACACTaGTGTAACAAAATCATTCAC +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVGYSEH*CNKIIH
Trigger: GTGAATGATTTTGTTACATCAGTGTTCACTGTAGCC...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTCAAGTTCTTCCATATaGGGTAAAGGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWSSSSI*GKGIQD
Trigger: ATCTTGGATCCCTTTACCTCATATGGAAGAACTTGA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GACTTTGAGCAGGATATAAATAACTCCCACAAGCTTAGCGTTCCAATAATGGAAGCCTCACTGAGAGCATaGCTTTTGAGTAAACACCAG +
Preference number: 4 (lower is better)
Translates to: DFEQDINNSHKLSVPIMEASLRA*LLSKHQ
Trigger: CTGGTGTTTACTCAAAAGTCATGCTCTCAGTGAGGC...TTCCATTATTGGAACGCTAAGCTTGTGGGAGTTATTTATATCCTGCTCAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGCAGAGCCTTAGAACCTaGTATGATACCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVQSLRT*YDTIHL
Trigger: CAGATGGATGGTATCATAGCAGGTTCTAAGGCTCTG...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228425.11
ENST00000318304.12
CDS-3UTR GCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTATCCTTTTCTTCATTTaGTGCCATCAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSILFFI*CHQGLH
Trigger: GTGGAGTCCTTGATGGCAGCAAATGAAGAAAAGGAT...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGATCACTGAAACCCTGTaGATCCAGCAAAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVITETL*IQQRGD
Trigger: ATCTCCTCTTTGCTGGATGCACAGGGTTTCAGTGAT...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGGAAGGGATGGAAACTTaGAAGATGGTAGTATGGAAC +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSEGMET*KMVVWN
Trigger: GTTCCATACTACCATCTTGCAAGTTTCCATCCCTTC...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTCCAGCCAGATCTAGGTaGTCTGCTGTCTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVPARSR*SAVSFS
Trigger: AGAAAAAGAGACAGCAGAGCACCTAGATCTGGCTGG...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGATGCCTTCAGAGAATaGACCTATCTGTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCDAFRE*TYLSHC
Trigger: ACAGTGAGACAGATAGGTGCATTCTCTGAAGGCATC...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGGATGCCTTCAGAGAATaGACCTATCTGTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVDAFRE*TYLSHC
Trigger: ACAGTGAGACAGATAGGTGCATTCTCTGAAGGCATC...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCGATGCCTTCAGAGAATaGACCTATCTGTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSDAFRE*TYLSHC
Trigger: ACAGTGAGACAGATAGGTGCATTCTCTGAAGGCATC...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAAGTGGGCACACTGAATaGTTAAAGAAGTTCCACATA +
Preference number: 4 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVSGHTE*LKKFHI
Trigger: TATGTGGAACTTCTTTAAGCATTCAGTGTGCCCACT...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAAGAGTGAAAAGCCAGTaGCTGGAAAAGCCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: ITNITTEPGILLSTRDTVRVKSQ*LEKPVQ
Trigger: TTGCACTGGCTTTTCCAGGCACTGGCTTTTCACTCT...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR CCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAAACACTTGTGTTAAATaGGTCACAACTGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGNTCVK*VTTGRS
Trigger: GGATCTCCCAGTTGTGACCCATTTAACACAAGTGTT...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGAACACTTGTGTTAAATaGGTCACAACTGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSNTCVK*VTTGRS
Trigger: GGATCTCCCAGTTGTGACCCATTTAACACAAGTGTT...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGTTTCTTTTTGGAATCTaGAGATGGAGGCGGTATCTG +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSFLFGI*RWRRYL
Trigger: CAGATACCGCCTCCATCTCCAGATTCCAAAAAGAAA...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGGGTCCACTTGGCAAATaGCATATCCAAGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVGPLGK*HIQVTV
Trigger: AACAGTGACTTGGATATGCCATTTGCCAAGTGGACC...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAACTTCTGATGGGGCGATaGTATTCTCATCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQLLMGR*YSHQMA
Trigger: GGCCATCTGATGAGAATACCATCGCCCCATCAGAAG...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGGCAGCAAAGTCTTATTaGGTGGGATGTTCAATAACT +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWAAKSY*VGCSIT
Trigger: AGTTATTGAACATCCCACCCAATAAGACTTTGCTGC...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAGCAGCAAAGTCTTATTaGGTGGGATGTTCAATAACT +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTAAKSY*VGCSIT
Trigger: AGTTATTGAACATCCCACCCAATAAGACTTTGCTGC...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAAAAGGCAAGTTTCTTTaGCTTCACTTTGGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGKGKFL*LHFGSS
Trigger: GCTACTGCCAAAGTGAAGCCAAAGAAACTTGCCTTT...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTAAAGGCAAGTTTCTTTaGCTTCACTTTGGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSKGKFL*LHFGSS
Trigger: GCTACTGCCAAAGTGAAGCCAAAGAAACTTGCCTTT...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGACAATAAGAGGCAAGTaGAGGTGTGGCTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWTIRGK*RCGWHL
Trigger: TAAATGCCAGCCACACCTCCACTTGCCTCTTATTGT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCACAATAAGAGGCAAGTaGAGGTGTGGCTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSTIRGK*RCGWHL
Trigger: TAAATGCCAGCCACACCTCCACTTGCCTCTTATTGT...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CATTTTCTGATTGCTGTCAGATCGCTTTCTAGAGATCACAGATGCCAAGAGCAGCTTTTTAGCAGAAGGTaGAAAGAACACTCCGGAATA +
Preference number: 4 (lower is better)
Translates to: HFLIAVRSLSRDHRCQEQLFSRR*KEHSGI
Trigger: TATTCCGGAGTGTTCTTTCCACCTTCTGCTAAAAAG...CTGCTCTTGGCATCTGTGATCTCTAGAAAGCGATCTGACAGCAATCAGAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp GTGTTCATTCTAGACATTTATATCGATAGAGAGAGAAGTCCCGTTTGCTGGTCCCTTCTAAAATCACTTTaGGGGGTAACGCCTCAGATA +
Preference number: 4 (lower is better)
Translates to: VFILDIYIDRERSPVCWSLLKSL*GVTPQI
Trigger: TATCTGAGGCGTTACCCCCCAAAGTGATTTTAGAAG...GGACCAGCAAACGGGACTTCTCTCTCTATCGATATAAATGTCTAGAATGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619325.1
3UTR CAA 72 bp TCCACCTCAATTTGTGAAAACCTGTCTTTTGTAGGGTaGGCTACCATGGGTAATTACGCAGCACTGAATAAA +
Preference number: 4 (lower is better)
Translates to: STSICENLSFVG*ATMGNYAALNK
Trigger: TTTATTCAGTGCTGCGTAATTACCCATGGTAGCCAACCCTACAAAAGACAGGTTTTCACAAATTGAGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCATGTACTCAGCAAAGTaGTCCACACGTTCTTTTATA +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSMYSAK*STRSFI
Trigger: TATAAAAGAACGTGTGGATCACTTTGCTGAGTACAT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTAGATGGAACTGGAATTaGGCAGCTCTTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCRWNWN*AALHIL
Trigger: GAGAATATGAAGAGCTGCTCAATTCCAGTTCCATCT...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATGGGTTGAATGTAGTTaGTTGACTTCTCCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTWVECS*LTSPKF
Trigger: AAACTTAGGAGAAGTCAATCAACTACATTCAACCCA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCTTCTCTAGATCTTGTTaGGAAGCCTGCAAAAGCGTT +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSFSRSC*EACKSV
Trigger: AACGCTTTTGCAGGCTTCTCAACAAGATCTAGAGAA...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATGGAGTTTCTTTCGATaGAGTGAATGCTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGWSFFR*SECLIP
Trigger: TGGAATCAAGCATTCACTTCATCGAAAGAAACTCCA...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTAAATCCAGCTTCCCATaGTTGGTTTCTTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSKSSFP*LVSSSD
Trigger: ATCTGAAGAAGAAACCAATCATGGGAAGCTGGATTT...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAAACTGGGTCTTATATTaGGGGAGGCCAATGTCATCC +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQNWVLY*GRPMSS
Trigger: GGATGACATTGGCCTCCCTCAATATAAGACCCAGTT...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAATCAGAAGGTTGAAATaGGTGGCCAAATGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRIRRLK*VAKCLR
Trigger: GCGAAGACATTTGGCCACTCATTTCAACCTTCTGAT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTCTACGGTCAAACGTTTaGGTCTTCATCTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECLRSNV*VFICNA
Trigger: AGCATTACAGATGAAGACTCAAACGTTTGACCGTAG...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTGGCTACAGTGAACACTaGTGTAACAAAATCATTCAC +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSGYSEH*CNKIIH
Trigger: GTGAATGATTTTGTTACATCAGTGTTCACTGTAGCC...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGTCAAGTTCTTCCATATaGGGTAAAGGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSSSSSI*GKGIQD
Trigger: ATCTTGGATCCCTTTACCTCATATGGAAGAACTTGA...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCCTCCACCTCAATTTGTaGAAACCTGTCTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSLHLNL*KPVFCR
Trigger: CCTACAAAAGACAGGTTTTCACAAATTGAGGTGGAG...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATGTGTGACAAGAGATaGAGTCAGAAAGTCATGGGG +
Preference number: 4 (lower is better)
Translates to: ITNITTEPGILLSTRDTVMCDKR*SQKVMG
Trigger: CCCCATGACTTTCTGACTTCATCTCTTGTCACACAT...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR GCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACAGAGCCTTAGAACCTaGTATGATACCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLEQSLRT*YDTIHL
Trigger: CAGATGGATGGTATCATAGCAGGTTCTAAGGCTCTG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228425.11
ENST00000318304.12
CDS-3UTR GCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTATCCTTTTCTTCATTTaGTGCCATCAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCILFFI*CHQGLH
Trigger: GTGGAGTCCTTGATGGCAGCAAATGAAGAAAAGGAT...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGATCCTTTTCTTCATTTaGTGCCATCAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWILFFI*CHQGLH
Trigger: GTGGAGTCCTTGATGGCAGCAAATGAAGAAAAGGAT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTACCACCGTGTCTTaGATTTTCTTGTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVSTTVS*IFLYLF
Trigger: GAACAGGTACAAGAAAATGCAAGACACGGTGGTACT...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAATCACTGAAACCCTGTaGATCCAGCAAAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRITETL*IQQRGD
Trigger: ATCTCCTCTTTGCTGGATGCACAGGGTTTCAGTGAT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGGAAGGGATGGAAACTTaGAAGATGGTAGTATGGAAC +
Preference number: 4 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVEGMET*KMVVWN
Trigger: GTTCCATACTACCATCTTGCAAGTTTCCATCCCTTC...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATTTCAGAAGTTTCCATaGTTACAGTTGCTGGCAATA +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTFQKFP*LQLLAI
Trigger: TATTGCCAGCAACTGTAAGCATGGAAACTTCTGAAA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATCTTCTTTTAACATGTaGGTCAGATTGTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTSSFNM*VRLLMP
Trigger: AGGCATCAACAATCTGACGCACATGTTAAAAGAAGA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTCTTCTTTTAACATGTaGGTCAGATTGTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWSSFNM*VRLLMP
Trigger: AGGCATCAACAATCTGACGCACATGTTAAAAGAAGA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGTCGGCACATTACTCCTaGTTTCTGTTTAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSSAHYS*FLFKLL
Trigger: GAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGA...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp TCCATGATGAAGTCAAAGGGAATCATGATTTTAGGTCTTTCCGCTAAGTTTATAGGGAAGGGAAGACACTaGTCTTTTCCTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SMMKSKGIMILGLSAKFIGKGRH*SFPPCG
Trigger: TCCACAAGGAGGAAAAGAGCAGTGTCTTCCCTTCCC...TATAAACTTAGCGGAAAGACCTAAAATCATGATTCCCTTTGACTTCATCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGTGCAAGATGGTAGTATaGAACTCTTCGGGAACACTT +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWCKMVV*NSSGTL
Trigger: AAGTGTTCCCGAAGAGTTCCATACTACCATCTTGCA...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTGCAAGATGGTAGTATaGAACTCTTCGGGAACACTT +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECCKMVV*NSSGTL
Trigger: AAGTGTTCCCGAAGAGTTCCATACTACCATCTTGCA...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGTTTCTTTTTGGAATCTaGAGATGGAGGCGGTATCTG +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWFLFGI*RWRRYL
Trigger: CAGATACCGCCTCCATCTCCAGATTCCAAAAAGAAA...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAGGTCCACTTGGCAAATaGCATATCCAAGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVGPLGK*HIQVTV
Trigger: AACAGTGACTTGGATATGCCATTTGCCAAGTGGACC...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTAAAGGCAAGTTTCTTTaGCTTCACTTTGGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECKGKFL*LHFGSS
Trigger: GCTACTGCCAAAGTGAAGCCAAAGAAACTTGCCTTT...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTCTTCAGAAACCAGCTaGTATATGAACATTCTGATC +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWSSETS*YMNILI
Trigger: GATCAGAATGTTCATATACCAGCTGGTTTCTGAAGA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTATTTCTACAAATTTTaGGGAGAGGAGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWYFYKF*GEEVIL
Trigger: CAGAATCACCTCCTCTCCCCAAAATTTGTAGAAATA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACATATTTCTACAAATTTTaGGGAGAGGAGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTYFYKF*GEEVIL
Trigger: CAGAATCACCTCCTCTCCCCAAAATTTGTAGAAATA...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTATAATCAAGTCCAGTaGCAGATACTGAACCGCCCA +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVYNQVQ*QILNRP
Trigger: TGGGCGGTTCAGTATCTGCCACTGGACTTGATTATA...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGTATAATCAAGTCCAGTaGCAGATACTGAACCGCCCA +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKYNQVQ*QILNRP
Trigger: TGGGCGGTTCAGTATCTGCCACTGGACTTGATTATA...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCTCTGTAACAGTTTCCTaGTATTTTCAACCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSSVTVS*YFQPGS
Trigger: AGAACCTGGTTGAAAATACCAGGAAACTGTTACAGA...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTAGCCATGCAAATATCTaGCGAAAGAGCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: NITTEPGILLSTRDTVIFSHANI*RKSFPG
Trigger: GCCTGGAAAGCTCTTTCGCCAGATATTTGCATGGCT...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAAGATGGAACTGGAATTaGGCAGCTCTTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRRWNWN*AALHIL
Trigger: GAGAATATGAAGAGCTGCTCAATTCCAGTTCCATCT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGGTTGAATGTAGTTaGTTGACTTCTCCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSWVECS*LTSPKF
Trigger: AAACTTAGGAGAAGTCAATCAACTACATTCAACCCA...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATGGGTTGAATGTAGTTaGTTGACTTCTCCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGWVECS*LTSPKF
Trigger: AAACTTAGGAGAAGTCAATCAACTACATTCAACCCA...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATTGTCCCTCCTCTTTTaGATTCAGGCTCAGACATGT +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQLSLLF*IQAQTC
Trigger: ACATGTCTGAGCCTGAATTCAAAAGAGGAGGGACAA...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAATTCTCTAGATCTTGTTaGGAAGCCTGCAAAAGCGTT +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLEFSRSC*EACKSV
Trigger: AACGCTTTTGCAGGCTTCTCAACAAGATCTAGAGAA...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCGATGAAGTGAATGCTTaGTTCCAAGTTCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSDEVNA*FQVPSL
Trigger: TAGAGAAGGAACTTGGAATCAAGCATTCACTTCATC...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTAAATCCAGCTTCCCATaGTTGGTTTCTTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCKSSFP*LVSSSD
Trigger: ATCTGAAGAAGAAACCAATCATGGGAAGCTGGATTT...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTTCAAGTTCTTCCATATaGGGTAAAGGGATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCSSSSI*GKGIQD
Trigger: ATCTTGGATCCCTTTACCTCATATGGAAGAACTTGA...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACTCCACCTCAATTTGTaGAAACCTGTCTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRLHLNL*KPVFCR
Trigger: CCTACAAAAGACAGGTTTTCACAAATTGAGGTGGAG...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GACTTTGAGCAGGATATAAATAACTCCCACAAGCTTAGCGTTCCAATAATGGAACTGTGGTTTTTACTCTaGGTAAGATGTGATGCCACT +
Preference number: 4 (lower is better)
Translates to: DFEQDINNSHKLSVPIMELWFLL*VRCDAT
Trigger: AGTGGCATCACATCTTACTCAGAGTAAAAACCACAG...TTCCATTATTGGAACGCTAAGCTTGTGGGAGTTATTTATATCCTGCTCAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR GCA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTCAGAGCCTTAGAACCTaGTATGATACCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: NITTEPGILLSTRDTVIFQSLRT*YDTIHL
Trigger: CAGATGGATGGTATCATAGCAGGTTCTAAGGCTCTG...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR GCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTAGTACCACCGTGTCTTaGATTTTCTTGTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVSTTVS*IFLYLF
Trigger: GAACAGGTACAAGAAAATGCAAGACACGGTGGTACT...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAAGTACCACCGTGTCTTaGATTTTCTTGTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRSTTVS*IFLYLF
Trigger: GAACAGGTACAAGAAAATGCAAGACACGGTGGTACT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAAGGCTGCTGGACTTCTaGAGACTTGAAGTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVRLLDF*RLEVKS
Trigger: ACTTTTAACTTCAAGTCTGCAGAAGTCCAGCAGCCT...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAAGGCTGCTGGACTTCTaGAGACTTGAAGTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRRLLDF*RLEVKS
Trigger: ACTTTTAACTTCAAGTCTGCAGAAGTCCAGCAGCCT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAGATGCCTTCAGAGAATaGACCTATCTGTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQDAFRE*TYLSHC
Trigger: ACAGTGAGACAGATAGGTGCATTCTCTGAAGGCATC...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGTCTTCTTTTAACATGTaGGTCAGATTGTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSSSFNM*VRLLMP
Trigger: AGGCATCAACAATCTGACGCACATGTTAAAAGAAGA...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTTCGGCACATTACTCCTaGTTTCTGTTTAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCSAHYS*FLFKLL
Trigger: GAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGA...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAGTGGGCACACTGAATaGTTAAAGAAGTTCCACATA +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWSGHTE*LKKFHI
Trigger: TATGTGGAACTTCTTTAAGCATTCAGTGTGCCCACT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGACTGCTAGTATTTTaGTGTAATGACACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSRLLVF*CNDTVN
Trigger: GTTAACTGTGTCATTACAGCAAAATACTAGCAGTCT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAGGTCCACTTGGCAAATaGCATATCCAAGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQGPLGK*HIQVTV
Trigger: AACAGTGACTTGGATATGCCATTTGCCAAGTGGACC...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTGCAGCAAAGTCTTATTaGGTGGGATGTTCAATAACT +
Preference number: 4 (lower is better)
Translates to: VGTTNNRQSAACCIYCECAAKSY*VGCSIT
Trigger: AGTTATTGAACATCCCACCCAATAAGACTTTGCTGC...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAAAAGGCAAGTTTCTTTaGCTTCACTTTGGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVKGKFL*LHFGSS
Trigger: GCTACTGCCAAAGTGAAGCCAAAGAAACTTGCCTTT...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CCA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAAAATCATTCACATCCTaGTTACTGTTCCTCAAATCC +
Preference number: 4 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGKSFTS*LLFLKS
Trigger: GGATTTGAGGAACAGTAACCAGGATGTGAATGATTT...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGTCTTCAGAAACCAGCTaGTATATGAACATTCTGATC +
Preference number: 4 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSSSETS*YMNILI
Trigger: GATCAGAATGTTCATATACCAGCTGGTTTCTGAAGA...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTCTTCAGAAACCAGCTaGTATATGAACATTCTGATC +
Preference number: 4 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSSSETS*YMNILI
Trigger: GATCAGAATGTTCATATACCAGCTGGTTTCTGAAGA...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTTTACAAAGAATATTTaGGCCCAGTGCTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWFTKNI*AQCYRK
Trigger: TTTTCTGTAGCACTGGGCCCAAATATTCTTTGTAAA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTATGTACTCAGCAAAGTaGTCCACACGTTCTTTTATA +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCMYSAK*STRSFI
Trigger: TATAAAAGAACGTGTGGATCACTTTGCTGAGTACAT...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAGATGAAGTGAATGCTTaGTTCCAAGTTCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVDEVNA*FQVPSL
Trigger: TAGAGAAGGAACTTGGAATCAAGCATTCACTTCATC...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCTTTCTTTCGATGAAGTaGATGCTTGATTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSFLSMK*MLDSKF
Trigger: GAACTTGGAATCAAGCATTCACTTCATCGAAAGAAA...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGATGGAGTTTCTTTCGATaGAGTGAATGCTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRWSFFR*SECLIP
Trigger: TGGAATCAAGCATTCACTTCATCGAAAGAAACTCCA...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAATCCAGCTTCCCATaGTTGGTTTCTTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLEKSSFP*LVSSSD
Trigger: ATCTGAAGAAGAAACCAATCATGGGAAGCTGGATTT...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAGGGATGTTCAATAACTaGGCCATTGTTTCTACGTTA +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVGMFNN*AIVSTL
Trigger: TAACGTAGAAACAATGGCTCAGTTATTGAACATCCC...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAGGGATGTTCAATAACTaGGCCATTGTTTCTACGTTA +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRGMFNN*AIVSTL
Trigger: TAACGTAGAAACAATGGCTCAGTTATTGAACATCCC...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAACTACGGTCAAACGTTTaGGTCTTCATCTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQLRSNV*VFICNA
Trigger: AGCATTACAGATGAAGACTCAAACGTTTGACCGTAG...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAGGCTACAGTGAACACTaGTGTAACAAAATCATTCAC +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRGYSEH*CNKIIH
Trigger: GTGAATGATTTTGTTACATCAGTGTTCACTGTAGCC...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAACTCCACCTCAATTTGTaGAAACCTGTCTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQLHLNL*KPVFCR
Trigger: CCTACAAAAGACAGGTTTTCACAAATTGAGGTGGAG...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGTTTCAGAAGTTTCCATaGTTACAGTTGCTGGCAATA +
Preference number: 4 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWFQKFP*LQLLAI
Trigger: TATTGCCAGCAACTGTAAGCATGGAAACTTCTGAAA...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTTTTCAGAAGTTTCCATaGTTACAGTTGCTGGCAATA +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCFQKFP*LQLLAI
Trigger: TATTGCCAGCAACTGTAAGCATGGAAACTTCTGAAA...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAAGGCTGCTGGACTTCTaGAGACTTGAAGTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQRLLDF*RLEVKS
Trigger: ACTTTTAACTTCAAGTCTGCAGAAGTCCAGCAGCCT...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR GCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAATCGGCACATTACTCCTaGTTTCTGTTTAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLESAHYS*FLFKLL
Trigger: GAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGA...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR GCA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAAGTGGGCACACTGAATaGTTAAAGAAGTTCCACATA +
Preference number: 4 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRSGHTE*LKKFHI
Trigger: TATGTGGAACTTCTTTAAGCATTCAGTGTGCCCACT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTTATTTCTACAAATTTTaGGGAGAGGAGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCYFYKF*GEEVIL
Trigger: CAGAATCACCTCCTCTCCCCAAAATTTGTAGAAATA...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAATGTACTCAGCAAAGTaGTCCACACGTTCTTTTATA +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVMYSAK*STRSFI
Trigger: TATAAAAGAACGTGTGGATCACTTTGCTGAGTACAT...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATGTACTCAGCAAAGTaGTCCACACGTTCTTTTATA +
Preference number: 4 (lower is better)
Translates to: ITNITTEPGILLSTRDTVMYSAK*STRSFI
Trigger: TATAAAAGAACGTGTGGATCACTTTGCTGAGTACAT...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR TCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTATTTCTTTCGATGAAGTaGATGCTTGATTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVFLSMK*MLDSKF
Trigger: GAACTTGGAATCAAGCATTCACTTCATCGAAAGAAA...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAGGGATGTTCAATAACTaGGCCATTGTTTCTACGTTA +
Preference number: 4 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQGMFNN*AIVSTL
Trigger: TAACGTAGAAACAATGGCTCAGTTATTGAACATCCC...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR TCA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTACAAAAATCTGATTCCTaGTGCTTACATTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: ITNITTEPGILLSTRDTVQKSDS*CLHSNW
Trigger: CCAATTGGAATGTAAGCATCAGGAATCAGATTTTTG...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR TCA 90 bp GACTTTGAGCAGGATATAAATAACTCCCACAAGCTTAGCGTTCCAATAATGGAAATAAGGGCAAAAATCTaGTTCCTGATGCTTACATTC +
Preference number: 4 (lower is better)
Translates to: DFEQDINNSHKLSVPIMEIRAKI*FLMLTF
Trigger: GAATGTAAGCATCAGGAATCAGATTTTTGCCCTTAT...TTCCATTATTGGAACGCTAAGCTTGTGGGAGTTATTTATATCCTGCTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR TCA 90 bp ATCTTCAAAGTAATAAAACGTCAGAAGAATGTTCCCCTAAGAGAAGTAAGCCTATACAAAGAGGAAAACTaGGCTGCCCCTCTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: IFKVIKRQKNVPLREVSLYKEEN*AAPLLK
Trigger: TTTTAGAAGAGGGGCAGCTCAGTTTTCCTCTTTGTA...TAGGCTTACTTCTCTTAGGGGAACATTCTTCTGACGTTTTATTACTTTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp ATCTTCAAAGTAATAAAACGTCAGAAGAATGTTCCCCTAAGAGAAGTAAGCCTAGTTTGCTGGTCCATGTaGATAGATAGGTGGATATCT +
Preference number: 4 (lower is better)
Translates to: IFKVIKRQKNVPLREVSLVCWSM*IDRWIS
Trigger: AGATATCCACCTATCTATTCACATGGACCAGCAAAC...TAGGCTTACTTCTCTTAGGGGAACATTCTTCTGACGTTTTATTACTTTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp ATCTTCAAAGTAATAAAACGTCAGAAGAATGTTCCCCTAAGAGAAGTAAGCCTATCTAGAGATCACAGATaGCAAGAGCAGGGATTAGAT +
Preference number: 4 (lower is better)
Translates to: IFKVIKRQKNVPLREVSLSRDHR*QEQGLD
Trigger: ATCTAATCCCTGCTCTTGGCATCTGTGATCTCTAGA...TAGGCTTACTTCTCTTAGGGGAACATTCTTCTGACGTTTTATTACTTTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CCA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAAAATCATTCACATCCTaGTTACTGTTCCTCAAATCC +
Preference number: 4 (lower is better)
Translates to: NRQSAACCIYCECLEKQVKSFTS*LLFLKS
Trigger: GGATTTGAGGAACAGTAACCAGGATGTGAATGATTT...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCTTTACAAAGAATATTTaGGCCCAGTGCTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSFTKNI*AQCYRK
Trigger: TTTTCTGTAGCACTGGGCCCAAATATTCTTTGTAAA...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTCTGTAACAGTTTCCTaGTATTTTCAACCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVSVTVS*YFQPGS
Trigger: AGAACCTGGTTGAAAATACCAGGAAACTGTTACAGA...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAATCTGTAACAGTTTCCTaGTATTTTCAACCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLESVTVS*YFQPGS
Trigger: AGAACCTGGTTGAAAATACCAGGAAACTGTTACAGA...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
3UTR CAA 72 bp AAACAATTATACTCTCATTCACCAGTGTCTTATTTTTaGTGGCAACTTCAGAATCGGCACATTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KQLYSHSPVSYF*WQLQNRHITPA
Trigger: AGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAAAAAATAAGACACTGGTGAATGAGAGTATAATTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
3UTR CAA 72 bp CTTCACAACACTAAATTAAATCCACGGAGGCATTTTTaGCTAAATTCCCCTAAGTCATTCACCTTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: LHNTKLNPRRHF*LNSPKSFTFVS
Trigger: AGAAACGAAGGTGAATGACTTAGGGGAATTTAGCAAAAAATGCCTCCGTGGATTTAATTTAGTGTTGTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR TCA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTTACAAATATAACTACTaGGCCAGGCATTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: NITTEPGILLSTRDTVIFYKYNY*ARHSSK
Trigger: CTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTA...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR TCA 90 bp TCCATGATGAAGTCAAAGGGAATCATGATTTTAGGTCTTTCCGCTAAGTTTATAGAGAGAACACAGAGATaGCAAAATGAAATGCAGATC +
Preference number: 4 (lower is better)
Translates to: SMMKSKGIMILGLSAKFIERTQR*QNEMQI
Trigger: GATCTGCATTTCATTTTGTCATCTCTGTGTTCTCTC...TATAAACTTAGCGGAAAGACCTAAAATCATGATTCCCTTTGACTTCATCATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR GCA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAGACTGCTAGTATTTTaGTGTAATGACACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: TTNNRQSAACCIYCECLERLLVF*CNDTVN
Trigger: GTTAACTGTGTCATTACAGCAAAATACTAGCAGTCT...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CCA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGTTTACAAAGAATATTTaGGCCCAGTGCTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: TNNRQSAACCIYCECLEKFTKNI*AQCYRK
Trigger: TTTTCTGTAGCACTGGGCCCAAATATTCTTTGTAAA...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR TCA 90 bp ATCTTCAAAGTAATAAAACGTCAGAAGAATGTTCCCCTAAGAGAAGTAAGCCTAAAGCTATTCACACAGTaGGTGTTACTAGTATTGGTT +
Preference number: 4 (lower is better)
Translates to: IFKVIKRQKNVPLREVSLKLFTQ*VLLVLV
Trigger: AACCAATACTAGTAACACTCACTGTGTGAATAGCTT...TAGGCTTACTTCTCTTAGGGGAACATTCTTCTGACGTTTTATTACTTTGAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS GCA 90 bp CGCCAGCTCGCAGCACACGAGTCCTTCCCCGTCCTTTCCCCACCCTaGCTGCACTACACCATGTCAGGAATCCGGGCAGGCACCGAGCTG +
Preference number: 5 (lower is better)
Translates to: RQLAAHESFPVLSPP*LHYTMSGIRAGTEL
Trigger: CAGCTCGGTGCCTGCCCGGATTCCTGACATGGTGTAGTGCAGGCAGGGTGGGGAAAGGACGGGGAAGGACTCGTGTGCTGCGAGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537927.5
ENST00000540114.5
ENST00000541633.5
ENST00000545334.5
ENST00000545381.5
CDS GCA 90 bp AGCTCGCAGCACACGAGTCCTTCCCCGTCCTTTCCCCACCCTGCCTaGACTACACCATGTCAGGAATCCGGGCAGGCACCGAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SSQHTSPSPSFPHPA*TTPCQESGQAPSWE
Trigger: CTCCCAGCTCGGTGCCTGCCCGGATTCCTGACATGGTGTAGTGCAGGCAGGGTGGGGAAAGGACGGGGAAGGACTCGTGTGCTGCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537927.5
ENST00000540114.5
ENST00000541633.5
ENST00000545334.5
ENST00000545381.5
CDS CCA 90 bp TGCCGAAGGGGTTGTCATCCATGGAGGTGTCCTGCCCTGGGGGCCTaGGAGGAAGGGTCCCAAATGGCCTGCTTTCTGCCGGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: CRRGCHPWRCPALGA*EEGSQMACFLPELC
Trigger: ACAGAGCTCCGGCAGAAAGCAGGCCATTTGGGACCCTTCCTCCCAGGCCCCCAGGGCAGGACACCTCCATGGATGACAACCCCTTCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537261.1
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
ENST00000619325.1
CDS CCA 90 bp CCTGCCTGCACTACACCATGTCAGGAATCCGGGCAGGCACCGAGCTaGGAGCTGACATCACTCCCAGTTCCAGGTACCTCCCCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: PACTTPCQESGQAPS*ELTSLPVPGTSPSH
Trigger: GTGGGAGGGGGAGGTACCTGGAACTGGGAGTGATGTCAGCTCCCAGCTCGGTGCCTGCCCGGATTCCTGACATGGTGTAGTGCAGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545381.5
CDS-3UTR CAA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGATCGGGGCCCCGCGGTaGCCCTTGTCCCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SPVADTEPPTSTSICENLIGAPR*PLSLLF
Trigger: AAAGAGGAGGGACAAGGGCAACCGCGGGGCCCCGAT...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCCCAATGGCGAGTGCCGAAGGGGTaGTCATCCATGGAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: VYDLQISQQRTQSHAAQWRVPKG*SSMEVS
Trigger: GGACACCTCCATGGATGACAACCCCTTCGGCACTCG...CCATTGGGCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS GCA 90 bp GTTGAGAAGCCTGCAAAAGCGTTTGGCCAGATGCAATCCAGTGCTTaGCAGAATTCAGGTACGAGCCCAAGCCCTGTTCCATCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: VEKPAKAFGQMQSSA*QNSGTSPSPVPSAN
Trigger: ATTGGCTGATGGAACAGGGCTTGGGCTCGTACCTGAATTCTGGCAAGCACTGGATTGCATCTGGCCAAACGCTTTTGCAGGCTTCTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS TCA 90 bp TCTCGCTTCTGGTGCTGTGCCTCAGCCCCAATCAGAAGGTTGAAATaGGTGGCCAAATGTCTTCGCAGCAAAGTCTTATTGGGTGGGATG +
Preference number: 5 (lower is better)
Translates to: SRFWCCASAPIRRLK*VAKCLRSKVLLGGM
Trigger: CATCCCACCCAATAAGACTTTGCTGCGAAGACATTTGGCCACTCATTTCAACCTTCTGATTGGGGCTGAGGCACAGCACCAGAAGCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS TCA 90 bp TGGCATCTCGCTTCTGGTGCTGTGCCTCAGCCCCAATCAGAAGGTTaGAATGAGTGGCCAAATGTCTTCGCAGCAAAGTCTTATTGGGTG +
Preference number: 5 (lower is better)
Translates to: WHLASGAVPQPQSEG*NEWPNVFAAKSYWV
Trigger: CACCCAATAAGACTTTGCTGCGAAGACATTTGGCCACTCATTTCAACCTTCTGATTGGGGCTGAGGCACAGCACCAGAAGCGAGATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS TCA 90 bp GCGCAGCCACTCCATCACTCGATGGTTAGTCCACTTCTGAACTTCTaGTGGGGCGATGGTATTCTATGGGAACACACAACCAGGATCCTA +
Preference number: 5 (lower is better)
Translates to: AQPLHHSMVSPLLNF*WGDGILWEHTTRIL
Trigger: TAGGATCCTGGTTGTGTGTTCCCATAGAATACCATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCATCGAGTGATGGAGTGGCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540256.1
CDS GCA 90 bp AAGTACATAATCCGGCAGCTCCATGGCATCTCGCTTCTGGTGCTGTaGCTCAGCCCCAATCAGAAGGTTGAAATGAGTGGCCAAATGTCT +
Preference number: 5 (lower is better)
Translates to: KYIIRQLHGISLLVL*LSPNQKVEMSGQMS
Trigger: AGACATTTGGCCACTCATTTCAACCTTCTGATTGGGGCTGAGGCACAGCACCAGAAGCGAGATGCCATGGAGCTGCCGGATTATGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS-3UTR CAA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGATCGGGGCCCCGCGGTaGCCCTTGTCCCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWIGAPR*PLSLLF
Trigger: AAAGAGGAGGGACAAGGGCAACCGCGGGGCCCCGAT...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGGATGCAATCCAGTGCTaGCCAGAATTCAGGTACGAG +
Preference number: 5 (lower is better)
Translates to: SPVADTEPPTSTSICENLDAIQC*PEFRYE
Trigger: CTCGTACCTGAATTCTGGCAAGCACTGGATTGCATC...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGACCTGGATGGCCCTTTaGATACTGAGATGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: SPVADTEPPTSTSICENLTWMAL*ILRWCS
Trigger: GCTACACCATCTCAGTATCAAAAGGGCCATCCAGGT...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGTCATATTCTCCATCTTaGCCTTGGGCCAGTACCACC +
Preference number: 5 (lower is better)
Translates to: SPVADTEPPTSTSICENLSYSPS*PWASTT
Trigger: GGTGGTACTGGCCCAAGGCAAAGATGGAGAATATGA...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318304.12
ENST00000537927.5
CDS GCA 90 bp TTCAGGTACGAGCCCAAGCCCTGTTCCATCAGCCAATTGCAAACCTaGTCCTTGGTCCACTTGGCAAATGGCATATCCAAGTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: FRYEPKPCSISQLQT*SLVHLANGISKSLL
Trigger: TAACAGTGACTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACAGGGCTTGGGCTCGTACCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS TCA 90 bp ATGTCATCCAACCATCTAGTGACCCAGTTGAAATCCAGCTTCCCATaGTTGGTTTCTTCTTCAGATCCCAGGGCTTGGAGTGCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: MSSNHLVTQLKSSFP*LVSSSDPRAWSASW
Trigger: CCAGCTAGCACTCCAAGCCCTGGGATCTGAAGAAGAAACCAATCATGGGAAGCTGGATTTCAACTGGGTCACTAGATGGTTGGATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS GCA 90 bp CTGTGCCACATTTTTCACACGTTTGTACTTGTCGATCAACCCTTGTaGTGTTTAAAATGGCTCCAAGCACAGTGTGGAAGCGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: LCHIFHTFVLVDQPL*CLKWLQAQCGSAAW
Trigger: CCAGGCAGCGCTTCCACACTGTGCTTGGAGCCATTTTAAACAGCACAAGGGTTGATCGACAAGTACAAACGTGTGAAAAATGTGGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541633.5
CDS-3UTR CAA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGCGAGTGCCGAAGGGGTaGTCATCCATGGAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWRVPKG*SSMEVS
Trigger: GGACACCTCCATGGATGACAACCCCTTCGGCACTCG...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCCCACTGCCTCTGAGATaGGGCGCATATTCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSPLPLR*GAYSAK
Trigger: CTTGGCAGAATATGCGCCCAATCTCAGAGGCAGTGG...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS TCA 90 bp TGTGTTAAATGGGTCACAACTGGGAGATCCCATTACTGGAGTGGGTaGTGGACTTTTCTCCAGATCACTGAAACCCTGTGCATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: CVKWVTTGRSHYWSG*WTFLQITETLCIQQ
Trigger: TTGCTGGATGCACAGGGTTTCAGTGATCTGGAGAAAAGTCCATCACCCACTCCAGTAATGGGATCTCCCAGTTGTGACCCATTTAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537261.1
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS CCA 90 bp CGCCTCCGTAGACAGTTTGGTTCAAAGTTATTGATCCTCAGGACCTaGATGGCCCTTTTGATACTGAGATGGTGTAGCACACTTACAACC +
Preference number: 5 (lower is better)
Translates to: RLRRQFGSKLLILRT*MALLILRWCSTLTT
Trigger: GGTTGTAAGTGTGCTACACCATCTCAGTATCAAAAGGGCCATCCAGGTCCTGAGGATCAATAACTTTGAACCAAACTGTCTACGGAGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS-3UTR CAA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACGAGTGCCGAAGGGGTaGTCATCCATGGAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: TTNNRQSAACCIYCECLERVPKG*SSMEVS
Trigger: GGACACCTCCATGGATGACAACCCCTTCGGCACTCG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTTGCAAACCTGCTCCTaGGTCCACTTGGCAAATGGC +
Preference number: 5 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWLQTCS*VHLANG
Trigger: GCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGCCTGCAAAAGCGTTaGGCCAGATGCAATCCAGTG +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSSLQKR*ARCNPV
Trigger: CACTGGATTGCATCTGGCCAAACGCTTTTGCAGGCT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGACCACTGCCTCTGAGATaGGGCGCATATTCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGPLPLR*GAYSAK
Trigger: CTTGGCAGAATATGCGCCCAATCTCAGAGGCAGTGG...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp AGTCCAGTGGCAGATACTGAACCGCCCACCTCCACCTCAATTTGTGAAAACCTGCCAGTGTCTTATTTTTaGTGGCAACTTCAGAATCGG +
Preference number: 5 (lower is better)
Translates to: SPVADTEPPTSTSICENLPVSYF*WQLQNR
Trigger: CCGATTCTGAAGTTGCCACAAAAAATAAGACACTGG...CAGGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS TCA 90 bp AGCATTCGACCATCAACCCGTCCTTCATCAAACTGGGTCTTATATTaGGGGAGGCCAATGTCATCCAACCATCTAGTGACCCAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SIRPSTRPSSNWVLY*GRPMSSNHLVTQLK
Trigger: TTTCAACTGGGTCACTAGATGGTTGGATGACATTGGCCTCCCTCAATATAAGACCCAGTTTGATGAAGGACGGGTTGATGGTCGAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS TCA 90 bp TTCAGAAAGATTTGGAAGAGACTCCTGAAAACGGTGACCGAGCTTTaGATTGTTAAGTGGTGGTGTTGTCAGCCATGTGGCTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: FRKIWKRLLKTVTEL*IVKWWCCQPCGCCC
Trigger: GCAACAGCAGCCACATGGCTGACAACACCACCACTTAACAATTCAAAGCTCGGTCACCGTTTTCAGGAGTCTCTTCCAAATCTTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538433.5
CDS GCA 90 bp TTTCTGCCGGAGCTCTGTCCCCATCAGATGTCTCTTTCTTCAGATTaGCCAGGCTGCTGGACTTCTGCAGACTTGAAGTTAAAAGTTTAT +
Preference number: 5 (lower is better)
Translates to: FLPELCPHQMSLSSD*PGCWTSADLKLKVY
Trigger: ATAAACTTTTAACTTCAAGTCTGCAGAAGTCCAGCAGCCTGGGCAATCTGAAGAAAGAGACATCTGATGGGGACAGAGCTCCGGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537261.1
CDS CCA 90 bp ATACCTCTGGATTTCTTTTTGGAATCTGGAGATGGAGGCGGTATCTaGAAGGGACTGTTCCTCTGTGAATCTTTTGGCCGAGAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: IPLDFFLESGDGGGI*KGLFLCESFGREEA
Trigger: TGCTTCTTCTCGGCCAAAAGATTCACAGAGGAACAGTCCCTTCCAGATACCGCCTCCATCTCCAGATTCCAAAAAGAAATCCAGAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCTGCTCCTTGGTCCACTaGGCAAATGGCATATCCAAG +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSCSLVH*ANGISK
Trigger: CTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCA...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATGCTCCTTGGTCCACTaGGCAAATGGCATATCCAAG +
Preference number: 5 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVCSLVH*ANGISK
Trigger: CTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCA...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTTGCAAACCTGCTCCTaGGTCCACTTGGCAAATGGC +
Preference number: 5 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSLQTCS*VHLANG
Trigger: GCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAA...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGAGCCTGCAAAAGCGTTaGGCCAGATGCAATCCAGTG +
Preference number: 5 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSSLQKR*ARCNPV
Trigger: CACTGGATTGCATCTGGCCAAACGCTTTTGCAGGCT...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGCACGAGGTCAGGAGATaGAGACCTTCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSHEVRR*RPSWLT
Trigger: TGTTAGCCAGGAAGGTCTCAATCTCCTGACCTCGTG...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGACACGAGGTCAGGAGATaGAGACCTTCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGHEVRR*RPSWLT
Trigger: TGTTAGCCAGGAAGGTCTCAATCTCCTGACCTCGTG...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCCCAATGGCCACGGAGGCATTTTTaGCTAAATTCCCCTAAGTCA +
Preference number: 5 (lower is better)
Translates to: VYDLQISQQRTQSHAAQWPRRHF*LNSPKS
Trigger: TGACTTAGGGGAATTTAGCAAAAAATGCCTCCGTGG...CCATTGGGCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CAA 90 bp GTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACGCAGCCCAATGGAAACAGCATTTAGGCTaGGAAGCAAAGCCTCTACAG +
Preference number: 5 (lower is better)
Translates to: VYDLQISQQRTQSHAAQWKQHLG*EAKPLQ
Trigger: CTGTAGAGGCTTTGCTTCCAAGCCTAAATGCTGTTT...CCATTGGGCTGCGTGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CAA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTGTCTCTTTCTTCAGATaGCCCAGGCTGCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: VGTTNNRQSAACCIYCECVSFFR*PRLLDF
Trigger: GAAGTCCAGCAGCCTGGGCAATCTGAAGAAAGAGAC...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGTCTCTTTCTTCAGATaGCCCAGGCTGCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCVSFFR*PRLLDF
Trigger: GAAGTCCAGCAGCCTGGGCAATCTGAAGAAAGAGAC...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTACCACTGCCTCTGAGATaGGGCGCATATTCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: NRQSAACCIYCECLEKQVPLPLR*GAYSAK
Trigger: CTTGGCAGAATATGCGCCCAATCTCAGAGGCAGTGG...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCCACTGCCTCTGAGATaGGGCGCATATTCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: TNNRQSAACCIYCECLEKPLPLR*GAYSAK
Trigger: CTTGGCAGAATATGCGCCCAATCTCAGAGGCAGTGG...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp GCACTGGCACTTCGTTTACGATCTTCAGATATCCCAACAACGCACACAATCACACATACGTACCTAAGTTaGGTGCACTTGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ALALRLRSSDIPTTHTITHTYLS*VHLLFS
Trigger: AGAGAACAGCAAGTGCACCAAACTTAGGTACGTATG...TGTGATTGTGTGCGTTGTTGGGATATCTGAAGATCGTAAACGAAGTGCCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CAA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAGTGTCTTGCATTTTCTaGTACCTGTTCAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVVSCIF*YLFRHC
Trigger: ACAGTGCCTGAACAGGTACAAGAAAATGCAAGACAC...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGGTCTCTTTCTTCAGATaGCCCAGGCTGCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: TNNRQSAACCIYCECLEKVSFFR*PRLLDF
Trigger: GAAGTCCAGCAGCCTGGGCAATCTGAAGAAAGAGAC...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGACCTCTGGATTTCTTTTaGGAATCTGGAGATGGAGGC +
Preference number: 5 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGPLDFF*ESGDGG
Trigger: GCCTCCATCTCCAGATTCCAAAAAGAAATCCAGAGG...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTTGCAAACCTGCTCCTaGGTCCACTTGGCAAATGGC +
Preference number: 5 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVLQTCS*VHLANG
Trigger: GCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAA...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCTGTTCCATCAGCCAATaGCAAACCTGCTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSCSISQ*QTCSLV
Trigger: GACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACA...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGACCTGGATGGCCCTTTaGATACTGAGATGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVTWMAL*ILRWCS
Trigger: GCTACACCATCTCAGTATCAAAAGGGCCATCCAGGT...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTACCTGGATGGCCCTTTaGATACTGAGATGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCTWMAL*ILRWCS
Trigger: GCTACACCATCTCAGTATCAAAAGGGCCATCCAGGT...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTACGCAGCAAAGTCTTATaGGGTGGGATGTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVRSKVL*GGMFNN
Trigger: GTTATTGAACATCCCACCCAATAAGACTTTGCTGCG...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCATGTGCGTCAGATTGTaGATGCCTTCAGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSMCVRL*MPSENA
Trigger: TGCATTCTCTGAAGGCATCAACAATCTGACGCACAT...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTACTTGAGGACAGGAGTTaGAGACCAGGCTGGACAACA +
Preference number: 5 (lower is better)
Translates to: NRQSAACCIYCECLEKQVLEDRS*RPGWTT
Trigger: TGTTGTCCAGCCTGGTCTCAAACTCCTGTCCTCAAG...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACTTGAGGACAGGAGTTaGAGACCAGGCTGGACAACA +
Preference number: 5 (lower is better)
Translates to: TTNNRQSAACCIYCECLELEDRS*RPGWTT
Trigger: TGTTGTCCAGCCTGGTCTCAAACTCCTGTCCTCAAG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCCTGTCTTTTGTAGGGTaGGCTACCATGGGTAATTAC +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSLSFVG*ATMGNY
Trigger: GTAATTACCCATGGTAGCCAACCCTACAAAAGACAG...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTCACGAGGTCAGGAGATaGAGACCTTCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVHEVRR*RPSWLT
Trigger: TGTTAGCCAGGAAGGTCTCAATCTCCTGACCTCGTG...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACACTGTTTCAGCTAAGTTaGGTGCACTTGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTLFQLS*VHLLFS
Trigger: AGAGAACAGCAAGTGCACCAAACTTAGCTGAAACAG...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318304.12
ENST00000537927.5
CDS CCA 90 bp AAGTTATTGATCCTCAGGACCTGGATGGCCCTTTTGATACTGAGATaGTGTAGCACACTTACAACCTTCAGAGACAGTAAGTCATCAACA +
Preference number: 5 (lower is better)
Translates to: KLLILRTWMALLILR*CSTLTTFRDSKSST
Trigger: TGTTGATGACTTACTGTCTCTGAAGGTTGTAAGTGTGCTACACCATCTCAGTATCAAAAGGGCCATCCAGGTCCTGAGGATCAATAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS CCA 90 bp TTTCCTGCATCAGTTCAGCCCTCCTGCCATAAAGTGTCCTTTTCATaGTCTATTCTGTGCCACATTTTTCACACGTTTGTACTTGTCGAT +
Preference number: 5 (lower is better)
Translates to: FPASVQPSCHKVSFS*SILCHIFHTFVLVD
Trigger: ATCGACAAGTACAAACGTGTGAAAAATGTGGCACAGAATAGACCATGAAAAGGACACTTTATGGCAGGAGGGCTGAACTGATGCAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541633.5
CDS CCA 90 bp CACTGCTCTTTTCCTCCTTGTGGAAGAATTAGGGCAAAGGCATTTTaGTCATACGTACCTAAGTTTGGTGCACTTGCTGTTCTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: HCSFPPCGRIRAKAF*SYVPKFGALAVLLL
Trigger: TAACAAGAGAACAGCAAGTGCACCAAACTTAGGTACGTATGACCAAAATGCCTTTGCCCTAATTCTTCCACAAGGAGGAAAAGAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CAA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGCGTTTCTGCTGTaGAATCTGGGATCTGGCATC +
Preference number: 5 (lower is better)
Translates to: TNNRQSAACCIYCECLEKQAFLL*NLGSGI
Trigger: GATGCCAGATCCCAGATTCAACAGCAGAAACGCTTG...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228425.11
ENST00000318304.12
CDS-3UTR CAA 90 bp GACTTTGAGCAGGATATAAATAACTCCCACAAGCTTAGCGTTCCAATAATGGAACAAGCGTTTCTGCTGTaGAATCTGGGATCTGGCATC +
Preference number: 5 (lower is better)
Translates to: DFEQDINNSHKLSVPIMEQAFLL*NLGSGI
Trigger: GATGCCAGATCCCAGATTCAACAGCAGAAACGCTTG...TTCCATTATTGGAACGCTAAGCTTGTGGGAGTTATTTATATCCTGCTCAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR CAA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAGTGTCCATTTGTCATTaGACTCTGAAGCCATTCAAC +
Preference number: 5 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTVSICH*TLKPFN
Trigger: GTTGAATGGCTTCAGAGTCAAATGACAAATGGACAC...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228425.11
ENST00000318304.12
CDS-3UTR CAA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGCTGGTAGGTGTCCATTaGTCATTTGACTCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVLVGVH*SFDSEA
Trigger: GGCTTCAGAGTCAAATGACAAATGGACACCTACCAG...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228425.11
ENST00000318304.12
CDS-3UTR CAA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTAGAGATGGAACTGGAATaGAGCAGCTCTTCATATTCT +
Preference number: 5 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVEMELE*SSSSYS
Trigger: AGAATATGAAGAGCTGCTCAATTCCAGTTCCATCTC...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTCCTCTGGATTTCTTTTaGGAATCTGGAGATGGAGGC +
Preference number: 5 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCPLDFF*ESGDGG
Trigger: GCCTCCATCTCCAGATTCCAAAAAGAAATCCAGAGG...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGCTCCTTGGTCCACTaGGCAAATGGCATATCCAAG +
Preference number: 5 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVCSLVH*ANGISK
Trigger: CTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCA...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGTTCCATCAGCCAATaGCAAACCTGCTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVCSISQ*QTCSLV
Trigger: GACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACA...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGTGTTCCATCAGCCAATaGCAAACCTGCTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: TNNRQSAACCIYCECLEKCSISQ*QTCSLV
Trigger: GACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACA...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAGATGCAATCCAGTGCTaGCCAGAATTCAGGTACGAG +
Preference number: 5 (lower is better)
Translates to: NRQSAACCIYCECLEKQVDAIQC*PEFRYE
Trigger: CTCGTACCTGAATTCTGGCAAGCACTGGATTGCATC...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTGATGCAATCCAGTGCTaGCCAGAATTCAGGTACGAG +
Preference number: 5 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVDAIQC*PEFRYE
Trigger: CTCGTACCTGAATTCTGGCAAGCACTGGATTGCATC...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAAGCCTGCAAAAGCGTTaGGCCAGATGCAATCCAGTG +
Preference number: 5 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQSLQKR*ARCNPV
Trigger: CACTGGATTGCATCTGGCCAAACGCTTTTGCAGGCT...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCTTTGGTTCAAAGTTATaGATCCTCAGGACCTGGATG +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSFGSKL*ILRTWM
Trigger: CATCCAGGTCCTGAGGATCAATAACTTTGAACCAAA...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTACCTGTCCCAATTCCATaGGACAAACATATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: SRQQKLEQQTIDNPLPVVPVPIP*DKHILH
Trigger: GTGAAGAATATGTTTGTCCAATGGAATTGGGACAGG...TACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGATGTGCGTCAGATTGTaGATGCCTTCAGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSMCVRL*MPSENA
Trigger: TGCATTCTCTGAAGGCATCAACAATCTGACGCACAT...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp CGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACACCAGTGTCTTATTTTTaGTGGCAACTTCAGAATCGG +
Preference number: 5 (lower is better)
Translates to: RHITPAFCLNFSTAEVGTPVSYF*WQLQNR
Trigger: CCGATTCTGAAGTTGCCACAAAAAATAAGACACTGG...TGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGATCATATTCTCCATCTTaGCCTTGGGCCAGTACCACC +
Preference number: 5 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRSYSPS*PWASTT
Trigger: GGTGGTACTGGCCCAAGGCAAAGATGGAGAATATGA...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ATTACAAATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAGGCAGACCCTACCATTaGACTCTGAAGCCATTCAAC +
Preference number: 5 (lower is better)
Translates to: ITNITTEPGILLSTRDTVGRPYH*TLKPFN
Trigger: GTTGAATGGCTTCAGAGTCAAATGGTAGGGTCTGCC...TACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATTTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS TCA 90 bp AAATGTCTTCGCAGCAAAGTCTTATTGGGTGGGATGTTCAATAACTaGGCCATTGTTTCTACGTTAAAACGAGGCTCTAGAACCATGAGC +
Preference number: 5 (lower is better)
Translates to: KCLRSKVLLGGMFNN*AIVSTLKRGSRTMS
Trigger: GCTCATGGTTCTAGAGCCTCGTTTTAACGTAGAAACAATGGCTCAGTTATTGAACATCCCACCCAATAAGACTTTGCTGCGAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS-3UTR CAA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAGTGTCCATTTGTCATTaGACTCTGAAGCCATTCAAC +
Preference number: 5 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGVSICH*TLKPFN
Trigger: GTTGAATGGCTTCAGAGTCAAATGACAAATGGACAC...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228425.11
ENST00000318304.12
CDS-3UTR CAA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGCAGTACCACCGTGTCTaGCATTTTCTTGTACCTGTT +
Preference number: 5 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWQYHRV*HFLVPV
Trigger: AACAGGTACAAGAAAATGCAAGACACGGTGGTACTG...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGGAGATGGAACTGGAATaGAGCAGCTCTTCATATTCT +
Preference number: 5 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSEMELE*SSSSYS
Trigger: AGAATATGAAGAGCTGCTCAATTCCAGTTCCATCTC...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCCTAAGTTTGGTGCACTaGCTGTTCTCTTGTTACTTT +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSLSLVH*LFSCYF
Trigger: AAAGTAACAAGAGAACAGCAAGTGCACCAAACTTAG...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACCTCTGGATTTCTTTTaGGAATCTGGAGATGGAGGC +
Preference number: 5 (lower is better)
Translates to: TTNNRQSAACCIYCECLEPLDFF*ESGDGG
Trigger: GCCTCCATCTCCAGATTCCAAAAAGAAATCCAGAGG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTAAACTGGGTCTTATATaGAGGGAGGCCAATGTCATC +
Preference number: 5 (lower is better)
Translates to: VGTTNNRQSAACCIYCECKLGLI*REANVI
Trigger: GATGACATTGGCCTCCCTCAATATAAGACCCAGTTT...ACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGTTTGGTTCAAAGTTATaGATCCTCAGGACCTGGATG +
Preference number: 5 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSFGSKL*ILRTWM
Trigger: CATCCAGGTCCTGAGGATCAATAACTTTGAACCAAA...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTCGCAGCAAAGTCTTATaGGGTGGGATGTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCRSKVL*GGMFNN
Trigger: GTTATTGAACATCCCACCCAATAAGACTTTGCTGCG...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCATGTGCGTCAGATTGTaGATGCCTTCAGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSMCVRL*MPSENA
Trigger: TGCATTCTCTGAAGGCATCAACAATCTGACGCACAT...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCCTATTTCTACAAATTTaGGGGAGAGGAGGTGATTCT +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSLFLQI*GRGGDS
Trigger: AGAATCACCTCCTCTCCCCAAAATTTGTAGAAATAG...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGGTAAAGGTTTCTGCTTaGCTTTTGGCTTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWVKVSA*LLASSK
Trigger: TTTTGAGGAAGCCAAAAGCAAAGCAGAAACCTTTAC...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCGTAAAGGTTTCTGCTTaGCTTTTGGCTTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: ATSESAHYSCFLFKLLDSVKVSA*LLASSK
Trigger: TTTTGAGGAAGCCAAAAGCAAAGCAGAAACCTTTAC...GCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTCTGTCTTTTGTAGGGTaGGCTACCATGGGTAATTAC +
Preference number: 5 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCLSFVG*ATMGNY
Trigger: GTAATTACCCATGGTAGCCAACCCTACAAAAGACAG...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAGTGTCTTGCATTTTCTaGTACCTGTTCAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: TTNNRQSAACCIYCECLEVSCIF*YLFRHC
Trigger: ACAGTGCCTGAACAGGTACAAGAAAATGCAAGACAC...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGGTGTCTTGCATTTTCTaGTACCTGTTCAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: TNNRQSAACCIYCECLEKVSCIF*YLFRHC
Trigger: ACAGTGCCTGAACAGGTACAAGAAAATGCAAGACAC...CTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACAGTACCACCGTGTCTaGCATTTTCTTGTACCTGTT +
Preference number: 5 (lower is better)
Translates to: TTNNRQSAACCIYCECLEQYHRV*HFLVPV
Trigger: AACAGGTACAAGAAAATGCAAGACACGGTGGTACTG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGTGGACTTCTGCAGACTaGAAGTTAAAAGTTTATCAC +
Preference number: 5 (lower is better)
Translates to: ESAHYSCFLFKLLDSRSWWTSAD*KLKVYH
Trigger: GTGATAAACTTTTAACTTCAAGTCTGCAGAAGTCCA...CCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGCTAAGTTTGGTGCACTaGCTGTTCTCTTGTTACTTT +
Preference number: 5 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSLSLVH*LFSCYF
Trigger: AAAGTAACAAGAGAACAGCAAGTGCACCAAACTTAG...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGAAAACTGGGTCTTATATaGAGGGAGGCCAATGTCATC +
Preference number: 5 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRKLGLI*REANVI
Trigger: GATGACATTGGCCTCCCTCAATATAAGACCCAGTTT...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAACTGGGTCTTATATaGAGGGAGGCCAATGTCATC +
Preference number: 5 (lower is better)
Translates to: TTNNRQSAACCIYCECLEKLGLI*REANVI
Trigger: GATGACATTGGCCTCCCTCAATATAAGACCCAGTTT...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGTTCTTTGGCTTCACTTaGGCAGTAGCTGTTAGAAGT +
Preference number: 5 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWFFGFT*AVAVRS
Trigger: ACTTCTAACAGCTACTGCCAAAGTGAAGCCAAAGAA...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp GCAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTTTCTTTGGCTTCACTTaGGCAGTAGCTGTTAGAAGT +
Preference number: 5 (lower is better)
Translates to: AEVGTTNNRQSAACCIYCFFGFT*AVAVRS
Trigger: ACTTCTAACAGCTACTGCCAAAGTGAAGCCAAAGAA...ACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp CAGAAGTTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGCCTGTCCCAATTCCATaGGACAAACATATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: QKLEQQTIDNPLPVVYTVPVPIP*DKHILH
Trigger: GTGAAGAATATGTTTGTCCAATGGAATTGGGACAGG...CACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAACTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCCCAGTGTCTTATTTTTaGTGGCAACTTCAGAATCGG +
Preference number: 5 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSPVSYF*WQLQNR
Trigger: CCGATTCTGAAGTTGCCACAAAAAATAAGACACTGG...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp TTGTGGCAACTTCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGCTATTTCTACAAATTTaGGGGAGAGGAGGTGATTCT +
Preference number: 5 (lower is better)
Translates to: LWQLQNRHITPAFCLNFSLFLQI*GRGGDS
Trigger: AGAATCACCTCCTCTCCCCAAAATTTGTAGAAATAG...CGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGAAGTTGCCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TCAGAATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTCTTTACAAAGAATATTaGGGCCCAGTGCTACAGAAA +
Preference number: 5 (lower is better)
Translates to: SESAHYSCFLFKLLDSRSLYKEY*GPVLQK
Trigger: TTTCTGTAGCACTGGGCCCAAATATTCTTTGTAAAG...ACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTCTGTTTCAGCTAAGTTaGGTGCACTTGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVLFQLS*VHLLFS
Trigger: AGAGAACAGCAAGTGCACCAAACTTAGCTGAAACAG...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318304.12
ENST00000537927.5
CDS TCA 90 bp TTGAATTCAGGCTCAGACATGTCATCTGGGTTGAATGTAGTTGATTaGCTTCTCCTAAGTCTAAAGAAGACAACACACATGGCCAGTATT +
Preference number: 5 (lower is better)
Translates to: LNSGSDMSSGLNVVD*LLLSLKKTTHMASI
Trigger: AATACTGGCCATGTGTGTTGTCTTCTTTAGACTTAGGAGAAGTCAATCAACTACATTCAACCCAGATGACATGTCTGAGCCTGAATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540503.1
CDS-3UTR CAA 90 bp AATCGGCACATTACTCCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGATGGACTTCTGCAGACTaGAAGTTAAAAGTTTATCAC +
Preference number: 5 (lower is better)
Translates to: NRHITPAFCLNFSTAEVGWTSAD*KLKVYH
Trigger: GTGATAAACTTTTAACTTCAAGTCTGCAGAAGTCCA...TCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGGAGTAATGTGCCGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCAAGTAGTTTACGATCTAAGTTaGGTGCACTTGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: NRQSAACCIYCECLEKQVVYDLS*VHLLFS
Trigger: AGAGAACAGCAAGTGCACCAAACTTAGATCGTAAAC...TACTTGCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228425.11
CDS-3UTR CAA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAACGCAGCAAAGTCTTATaGGGTGGGATGTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQRSKVL*GGMFNN
Trigger: GTTATTGAACATCCCACCCAATAAGACTTTGCTGCG...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAATTCTTTGGCTTCACTTaGGCAGTAGCTGTTAGAAGT +
Preference number: 5 (lower is better)
Translates to: TTNNRQSAACCIYCECLEFFGFT*AVAVRS
Trigger: ACTTCTAACAGCTACTGCCAAAGTGAAGCCAAAGAA...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACCTGTCCCAATTCCATaGGACAAACATATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRPVPIP*DKHILH
Trigger: GTGAAGAATATGTTTGTCCAATGGAATTGGGACAGG...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp GAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGCTATTTCTACAAATTTaGGGGAGAGGAGGTGATTCT +
Preference number: 5 (lower is better)
Translates to: EQQTIDNPLPVVYTVSVWLFLQI*GRGGDS
Trigger: AGAATCACCTCCTCTCCCCAAAATTTGTAGAAATAG...CCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAACTGTCTTTTGTAGGGTaGGCTACCATGGGTAATTAC +
Preference number: 5 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQLSFVG*ATMGNY
Trigger: GTAATTACCCATGGTAGCCAACCCTACAAAAGACAG...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp ATCTTCAAAGTAATAAAACGTCAGAAGAATGTTCCCCTAAGAGAAGTAAGCCTAAGAGAGAAGTCCCGTTaGCTGGTCCATGTGAATAGA +
Preference number: 5 (lower is better)
Translates to: IFKVIKRQKNVPLREVSLREKSR*LVHVNR
Trigger: TCTATTCACATGGACCAGCAAACGGGACTTCTCTCT...TAGGCTTACTTCTCTTAGGGGAACATTCTTCTGACGTTTTATTACTTTGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS-3UTR CAA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAGAGATGGAACTGGAATaGAGCAGCTCTTCATATTCT +
Preference number: 5 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQEMELE*SSSSYS
Trigger: AGAATATGAAGAGCTGCTCAATTCCAGTTCCATCTC...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp CAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAAAAGCTGGACTTCTGCAGACTaGAAGTTAAAAGTTTATCAC +
Preference number: 5 (lower is better)
Translates to: QTIDNPLPVVYTVSVWKSWTSAD*KLKVYH
Trigger: GTGATAAACTTTTAACTTCAAGTCTGCAGAAGTCCA...GCTTTTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TTGGAACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTCTAAGTTTGGTGCACTaGCTGTTCTCTTGTTACTTT +
Preference number: 5 (lower is better)
Translates to: LEQQTIDNPLPVVYTVSVLSLVH*LFSCYF
Trigger: AAAGTAACAAGAGAACAGCAAGTGCACCAAACTTAG...AACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGTTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAATTTGGTTCAAAGTTATaGATCCTCAGGACCTGGATG +
Preference number: 5 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQFGSKL*ILRTWM
Trigger: CATCCAGGTCCTGAGGATCAATAACTTTGAACCAAA...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAACCAGTGTCTTATTTTTaGTGGCAACTTCAGAATCGG +
Preference number: 5 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQPVSYF*WQLQNR
Trigger: CCGATTCTGAAGTTGCCACAAAAAATAAGACACTGG...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS-3UTR CAA 90 bp ACAACAAACAATAGACAATCCGCTGCCTGTTGTATATACTGTGAGTGTTTGGAACTTTACAAAGAATATTaGGGCCCAGTGCTACAGAAA +
Preference number: 5 (lower is better)
Translates to: TTNNRQSAACCIYCECLELYKEY*GPVLQK
Trigger: TTTCTGTAGCACTGGGCCCAAATATTCTTTGTAAAG...TTCCAAACACTCACAGTATATACAACAGGCAGCGGATTGTCTATTGTTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp CCTGCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACTTTACAAAGAATATTaGGGCCCAGTGCTACAGAAA +
Preference number: 5 (lower is better)
Translates to: PAFCLNFSTAEVGTTNNRLYKEY*GPVLQK
Trigger: TTTCTGTAGCACTGGGCCCAAATATTCTTTGTAAAG...TCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp AATATAACTACTGAGCCAGGCATTCTTCTAAGCACCAGGGATACAGTAATTTTTTTTTTAAATGAGACCTaGGCGATGACTTTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: NITTEPGILLSTRDTVIFFLNET*AMTLSR
Trigger: CCTGCTCAAAGTCATCGCCAAGGTCTCATTTAAAAA...AAAAATTACTGTATCCCTGGTGCTTAGAAGAATGCCTGGCTCAGTAGTTATATT
39% GC, longest homopolymer 10 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545334.5
CDS-3UTR CAA 90 bp GCTTTCTGTTTAAACTTCTCGACAGCAGAAGTTGGAACAACAAACAATAGACAAGTAAAGGTTTCTGCTTaGCTTTTGGCTTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: AFCLNFSTAEVGTTNNRQVKVSA*LLASSK
Trigger: TTTTGAGGAAGCCAAAAGCAAAGCAGAAACCTTTAC...TTGTCTATTGTTTGTTGTTCCAACTTCTGCTGTCGAGAAGTTTAAACAGAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
CDS-3UTR CAA 90 bp TCCATGATGAAGTCAAAGGGAATCATGATTTTAGGTCTTTCCGCTAAGTTTATACTAAGTTTGGTGCACTaGCTGTTCTCTTGTTACTTT +
Preference number: 5 (lower is better)
Translates to: SMMKSKGIMILGLSAKFILSLVH*LFSCYF
Trigger: AAAGTAACAAGAGAACAGCAAGTGCACCAAACTTAG...TATAAACTTAGCGGAAAGACCTAAAATCATGATTCCCTTTGACTTCATCATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS CAA 90 bp GGCTCTAGAACCATGAGCCCACCATGGACACCACTGCCTCTGAGATaGGGCGCATATTCTGCCAAGTCCACGGAGCGCAGCCACTCCATC +
Preference number: 6 (lower is better)
Translates to: GSRTMSPPWTPLPLR*GAYSAKSTERSHSI
Trigger: GATGGAGTGGCTGCGCTCCGTGGACTTGGCAGAATATGCGCCCAATCTCAGAGGCAGTGGTGTCCATGGTGGGCTCATGGTTCTAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS TCA 72 bp CTCCAAGCACAGTGTGGAAGCGCTGCCTGGTGTTCCTaGGGTAATGAGGCCGTGCCTCAAGGACGAAACCAG +
Preference number: 6 (lower is better)
Translates to: LQAQCGSAAWCS*GNEAVPQGRNQ
Trigger: CTGGTTTCGTCCTTGAGGCACGGCCTCATTACCTCAGGAACACCAGGCAGCGCTTCCACACTGTGCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541633.5
CDS GCA 72 bp GGGCCTGGGAGGAAGGGTCCCAAATGGCCTGCTTTCTaGCGGAGCTCTGTCCCCATCAGATGTCTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: GPGRKGPKWPAF*RSSVPIRCLFL
Trigger: AAGAAAGAGACATCTGATGGGGACAGAGCTCCGGCAGAAAGCAGGCCATTTGGGACCCTTCCTCCCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537261.1
CDS GCA 72 bp ATCCGGCAGCTCCATGGCATCTCGCTTCTGGTGCTGTaGCTCAGCCCCAATCAGAAGGTTGAAATGAGTGGC +
Preference number: 6 (lower is better)
Translates to: IRQLHGISLLVL*LSPNQKVEMSG
Trigger: GCCACTCATTTCAACCTTCTGATTGGGGCTGAGGCACAGCACCAGAAGCGAGATGCCATGGAGCTGCCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS GCA 72 bp CCTGCAAAAGCGTTTGGCCAGATGCAATCCAGTGCTTaGCAGAATTCAGGTACGAGCCCAAGCCCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: PAKAFGQMQSSA*QNSGTSPSPVP
Trigger: TGGAACAGGGCTTGGGCTCGTACCTGAATTCTGGCAAGCACTGGATTGCATCTGGCCAAACGCTTTTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS GCA 72 bp GAAGCCTGCAAAAGCGTTTGGCCAGATGCAATCCAGTaGTTGCCAGAATTCAGGTACGAGCCCAAGCCCTGT +
Preference number: 6 (lower is better)
Translates to: EACKSVWPDAIQ*LPEFRYEPKPC
Trigger: ACAGGGCTTGGGCTCGTACCTGAATTCTGGCAAGCACTGGATTGCATCTGGCCAAACGCTTTTGCAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS CAA 72 bp TTCAGGTACGAGCCCAAGCCCTGTTCCATCAGCCAATaGCAAACCTGCTCCTTGGTCCACTTGGCAAATGGC +
Preference number: 6 (lower is better)
Translates to: FRYEPKPCSISQ*QTCSLVHLANG
Trigger: GCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACAGGGCTTGGGCTCGTACCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS CAA 90 bp GAGATGGAGGCGGTATCTGGAAGGGACTGTTCCTCTGTGAATCTTTaGGCCGAGAAGAAGCACCAGCCAGATCTAGGTGCTCTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: EMEAVSGRDCSSVNL*AEKKHQPDLGALLS
Trigger: AGACAGCAGAGCACCTAGATCTGGCTGGTGCTTCTTCTCGGCCAAAAGATTCACAGAGGAACAGTCCCTTCCAGATACCGCCTCCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS TCA 72 bp AGATGGAGGCGGTATCTGGAAGGGACTGTTCCTCTGTaGATCTTTTGGCCGAGAAGAAGCACCAGCCAGATC +
Preference number: 6 (lower is better)
Translates to: RWRRYLEGTVPL*IFWPRRSTSQI
Trigger: GATCTGGCTGGTGCTTCTTCTCGGCCAAAAGATTCACAGAGGAACAGTCCCTTCCAGATACCGCCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS GCA 72 bp GAGCCCAAGCCCTGTTCCATCAGCCAATTGCAAACCTaGTCCTTGGTCCACTTGGCAAATGGCATATCCAAG +
Preference number: 6 (lower is better)
Translates to: EPKPCSISQLQT*SLVHLANGISK
Trigger: CTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACAGGGCTTGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS CAA 72 bp GCGGTATCTGGAAGGGACTGTTCCTCTGTGAATCTTTaGGCCGAGAAGAAGCACCAGCCAGATCTAGGTGCT +
Preference number: 6 (lower is better)
Translates to: AVSGRDCSSVNL*AEKKHQPDLGA
Trigger: AGCACCTAGATCTGGCTGGTGCTTCTTCTCGGCCAAAAGATTCACAGAGGAACAGTCCCTTCCAGATACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS CAA 90 bp TTGCCAGAATTCAGGTACGAGCCCAAGCCCTGTTCCATCAGCCAATaGCAAACCTGCTCCTTGGTCCACTTGGCAAATGGCATATCCAAG +
Preference number: 6 (lower is better)
Translates to: LPEFRYEPKPCSISQ*QTCSLVHLANGISK
Trigger: CTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACAGGGCTTGGGCTCGTACCTGAATTCTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS TCA 72 bp TGGGTCACAACTGGGAGATCCCATTACTGGAGTGGGTaGTGGACTTTTCTCCAGATCACTGAAACCCTGTGC +
Preference number: 6 (lower is better)
Translates to: WVTTGRSHYWSG*WTFLQITETLC
Trigger: GCACAGGGTTTCAGTGATCTGGAGAAAAGTCCATCACCCACTCCAGTAATGGGATCTCCCAGTTGTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537261.1
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS TCA 72 bp CTCCATCACTCGATGGTTAGTCCACTTCTGAACTTCTaGTGGGGCGATGGTATTCTCATCAGATGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: LHHSMVSPLLNF*WGDGILIRWPP
Trigger: AGGCGGCCATCTGATGAGAATACCATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCATCGAGTGATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS TCA 72 bp GCTTCTGGTGCTGTGCCTCAGCCCCAATCAGAAGGTTaGAATGAGTGGCCAAATGTCTTCGCAGCAAAGTCT +
Preference number: 6 (lower is better)
Translates to: ASGAVPQPQSEG*NEWPNVFAAKS
Trigger: AGACTTTGCTGCGAAGACATTTGGCCACTCATTTCAACCTTCTGATTGGGGCTGAGGCACAGCACCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS TCA 72 bp CGCAGCCACTCCATCACTCGATGGTTAGTCCACTTCTaGACTTCTGATGGGGCGATGGTATTCTATGGGAAC +
Preference number: 6 (lower is better)
Translates to: RSHSITRWLVHF*TSDGAMVFYGN
Trigger: GTTCCCATAGAATACCATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCATCGAGTGATGGAGTGGCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540256.1
CDS CCA 72 bp ACGTTAAAACGAGGCTCTAGAACCATGAGCCCACCATaGACACCACTGCCTCTGAGATTGGGCGCATATTCT +
Preference number: 6 (lower is better)
Translates to: TLKRGSRTMSPP*TPLPLRLGAYS
Trigger: AGAATATGCGCCCAATCTCAGAGGCAGTGGTGTCCATGGTGGGCTCATGGTTCTAGAGCCTCGTTTTAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS CAA 90 bp TACGAGCCCAAGCCCTGTTCCATCAGCCAATTGCAAACCTGCTCCTaGGTCCACTTGGCAAATGGCATATCCAAGTCACTGTTAGACTGT +
Preference number: 6 (lower is better)
Translates to: YEPKPCSISQLQTCS*VHLANGISKSLLDC
Trigger: ACAGTCTAACAGTGACTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACAGGGCTTGGGCTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS TCA 72 bp CGCAGCCACTCCATCACTCGATGGTTAGTCCACTTCTaGACTTCTGATGGGGCGATGGTATTCTCATCAGAT +
Preference number: 6 (lower is better)
Translates to: RSHSITRWLVHF*TSDGAMVFSSD
Trigger: ATCTGATGAGAATACCATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCATCGAGTGATGGAGTGGCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS TCA 72 bp CTCCTAATGTTCATCCAGGTGCTACGGTCAAACGTTTaGGTCTTCATCTGTAATGCTGGCACTGGGGGAACG +
Preference number: 6 (lower is better)
Translates to: LLMFIQVLRSNV*VFICNAGTGGT
Trigger: CGTTCCCCCAGTGCCAGCATTACAGATGAAGACTCAAACGTTTGACCGTAGCACCTGGATGAACATTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
CDS TCA 72 bp CGCAGCCACTCCATCACTCGATGGTTAGTCCACTTCTaGACTTCTGATGGGGCGATGGTATTAACAGTCATG +
Preference number: 6 (lower is better)
Translates to: RSHSITRWLVHF*TSDGAMVLTVM
Trigger: CATGACTGTTAATACCATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCATCGAGTGATGGAGTGGCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539326.1
CDS GCA 72 bp ATCTTGTTGAGAAGCCTGCAAAAGCGTTTGGCCAGATaGAATCCAGTGCTTGCCAGAATTCAGGTACGAGCC +
Preference number: 6 (lower is better)
Translates to: ILLRSLQKRLAR*NPVLARIQVRA
Trigger: GGCTCGTACCTGAATTCTGGCAAGCACTGGATTGCATCTGGCCAAACGCTTTTGCAGGCTTCTCAACAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS GCA 72 bp TCTCCATCTTTGCCTTGGGCCAGTACCACCGTGTCTTaGATTTTCTTGTACCTGTTCAGGCACTGTCGAAGA +
Preference number: 6 (lower is better)
Translates to: SPSLPWASTTVS*IFLYLFRHCRR
Trigger: TCTTCGACAGTGCCTGAACAGGTACAAGAAAATGCAAGACACGGTGGTACTGGCCCAAGGCAAAGATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318304.12
ENST00000537927.5
ENST00000542629.5
CDS CCA 72 bp AGCCCTGTTCCATCAGCCAATTGCAAACCTGCTCCTTaGTCCACTTGGCAAATGGCATATCCAAGTCACTGT +
Preference number: 6 (lower is better)
Translates to: SPVPSANCKPAP*STWQMAYPSHC
Trigger: ACAGTGACTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS CAA 72 bp AAGCCCTGTTCCATCAGCCAATTGCAAACCTGCTCCTaGGTCCACTTGGCAAATGGCATATCCAAGTCACTG +
Preference number: 6 (lower is better)
Translates to: KPCSISQLQTCS*VHLANGISKSL
Trigger: CAGTGACTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACAGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS CAA 72 bp GATGGCCGCCTCCGTAGACAGTTTGGTTCAAAGTTATaGATCCTCAGGACCTGGATGGCCCTTTTGATACTG +
Preference number: 6 (lower is better)
Translates to: DGRLRRQFGSKL*ILRTWMALLIL
Trigger: CAGTATCAAAAGGGCCATCCAGGTCCTGAGGATCAATAACTTTGAACCAAACTGTCTACGGAGGCGGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS CAA 72 bp TTCTCCATCTTTGCCTTGGGCCAGTACCACCGTGTCTaGCATTTTCTTGTACCTGTTCAGGCACTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: FSIFALGQYHRV*HFLVPVQALSK
Trigger: CTTCGACAGTGCCTGAACAGGTACAAGAAAATGCAAGACACGGTGGTACTGGCCCAAGGCAAAGATGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318304.12
ENST00000537927.5
ENST00000542629.5
CDS CAA 90 bp AAGCCCTGTTCCATCAGCCAATTGCAAACCTGCTCCTTGGTCCACTaGGCAAATGGCATATCCAAGTCACTGTTAGACTGTCCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: KPCSISQLQTCSLVH*ANGISKSLLDCPKS
Trigger: AGACTTGGGACAGTCTAACAGTGACTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGAACAGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS TCA 72 bp CCATCAACCCGTCCTTCATCAAACTGGGTCTTATATTaGGGGAGGCCAATGTCATCCAACCATCTAGTGACC +
Preference number: 6 (lower is better)
Translates to: PSTRPSSNWVLY*GRPMSSNHLVT
Trigger: GGTCACTAGATGGTTGGATGACATTGGCCTCCCTCAATATAAGACCCAGTTTGATGAAGGACGGGTTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS TCA 72 bp CTCCATCACTCGATGGTTAGTCCACTTCTGAACTTCTaGTGGGGCGATGGTATTCTATGGGAACACACAACC +
Preference number: 6 (lower is better)
Translates to: LHHSMVSPLLNF*WGDGILWEHTT
Trigger: GGTTGTGTGTTCCCATAGAATACCATCGCCCCATCAGAAGTTCAGAAGTGGACTAACCATCGAGTGATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540256.1
CDS TCA 72 bp AGGGGCAAATTCCAACCCAGATGCATTTATGTAGGCTaGGAAGTCCCAAGATCTGCTAACTGCAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: RGKFQPRCIYVG*EVPRSANCKLE
Trigger: CTCCAGCTTGCAGTTAGCAGATCTTGGGACTTCTCAGCCTACATAAATGCATCTGGGTTGGAATTTGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542187.1
CDS GCA 72 bp ACGATGCTCCACTTTCCTGCATCAGTTCAGCCCTCCTaGCATAAAGTGTCCTTTTCATGGTCTATTCTGTGC +
Preference number: 6 (lower is better)
Translates to: TMLHFPASVQPS*HKVSFSWSILC
Trigger: GCACAGAATAGACCATGAAAAGGACACTTTATGGCAGGAGGGCTGAACTGATGCAGGAAAGTGGAGCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541633.5
CDS CCA 72 bp CCAATTGCAAACCTGCTCCTTGGTCCACTTGGCAAATaGCATATCCAAGTCACTGTTAGACTGTCCCAAGTC +
Preference number: 6 (lower is better)
Translates to: PIANLLLGPLGK*HIQVTVRLSQV
Trigger: GACTTGGGACAGTCTAACAGTGACTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS CCA 72 bp TTTGTACTTGTCGATCAACCCTTGTGCTGTTTAAAATaGCTCCAAGCACAGTGTGGAAGCGCTGCCTGGTGT +
Preference number: 6 (lower is better)
Translates to: FVLVDQPLCCLK*LQAQCGSAAWC
Trigger: ACACCAGGCAGCGCTTCCACACTGTGCTTGGAGCCATTTTAAACAGCACAAGGGTTGATCGACAAGTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541633.5
CDS CAA 90 bp TTCTCATCAGATGGCCGCCTCCGTAGACAGTTTGGTTCAAAGTTATaGATCCTCAGGACCTGGATGGCCCTTTTGATACTGAGATGGTGT +
Preference number: 6 (lower is better)
Translates to: FSSDGRLRRQFGSKL*ILRTWMALLILRWC
Trigger: ACACCATCTCAGTATCAAAAGGGCCATCCAGGTCCTGAGGATCAATAACTTTGAACCAAACTGTCTACGGAGGCGGCCATCTGATGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS CAA 90 bp TCTCCATCTTTGCCTTGGGCCAGTACCACCGTGTCTTGCATTTTCTaGTACCTGTTCAGGCACTGTCGAAGATCTTCTATTTTCCGATCC +
Preference number: 6 (lower is better)
Translates to: SPSLPWASTTVSCIF*YLFRHCRRSSIFRS
Trigger: GGATCGGAAAATAGAAGATCTTCGACAGTGCCTGAACAGGTACAAGAAAATGCAAGACACGGTGGTACTGGCCCAAGGCAAAGATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318304.12
ENST00000537927.5
ENST00000542629.5
CDS CAA 90 bp CTTTCTGCCGGAGCTCTGTCCCCATCAGATGTCTCTTTCTTCAGATaGCCCAGGCTGCTGGACTTCTGCAGACTTGAAGTTAAAAGTTTA +
Preference number: 6 (lower is better)
Translates to: LSAGALSPSDVSFFR*PRLLDFCRLEVKSL
Trigger: TAAACTTTTAACTTCAAGTCTGCAGAAGTCCAGCAGCCTGGGCAATCTGAAGAAAGAGACATCTGATGGGGACAGAGCTCCGGCAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537261.1
CDS CAA 90 bp ATTCTGTGCCACATTTTTCACACGTTTGTACTTGTCGATCAACCCTaGTGCTGTTTAAAATGGCTCCAAGCACAGTGTGGAAGCGCTGCC +
Preference number: 6 (lower is better)
Translates to: ILCHIFHTFVLVDQP*CCLKWLQAQCGSAA
Trigger: GGCAGCGCTTCCACACTGTGCTTGGAGCCATTTTAAACAGCACAAGGGTTGATCGACAAGTACAAACGTGTGAAAAATGTGGCACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541633.5
CDS TCA 72 bp GCTTCCTGCAAAGTTCCTGCACGAGTGAGTTCTGACTaGGACTGTCAGCTAAGTTTTCCTGATGAACTGCTT +
Preference number: 6 (lower is better)
Translates to: ASCKVPARVSSD*DCQLSFPDELL
Trigger: AAGCAGTTCATCAGGAAAACTTAGCTGACAGTCTCAGTCAGAACTCACTCGTGCAGGAACTTTGCAGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535575.1
CDS CCA 72 bp CTGTCTCTTTTTCTGTTTCAGCTAGGGTGGGTGCACTaGCACTTCGTTTACGATCTAAGTTTGGTGCACTTG +
Preference number: 6 (lower is better)
Translates to: LSLFLFQLGWVH*HFVYDLSLVHL
Trigger: CAAGTGCACCAAACTTAGATCGTAAACGAAGTGCCAGTGCACCCACCCTAGCTGAAACAGAAAAAGAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228425.11
CDS CCA 72 bp GATTTCTTTTTGGAATCTGGAGATGGAGGCGGTATCTaGAAGGGACTGTTCCTCTGTGAATCTTTTGGCCGA +
Preference number: 6 (lower is better)
Translates to: DFFLESGDGGGI*KGLFLCESFGR
Trigger: TCGGCCAAAAGATTCACAGAGGAACAGTCCCTTCCAGATACCGCCTCCATCTCCAGATTCCAAAAAGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS CAA 72 bp TCCATCAGCCAATTGCAAACCTGCTCCTTGGTCCACTaGGCAAATGGCATATCCAAGTCACTGTTAGACTGT +
Preference number: 6 (lower is better)
Translates to: SISQLQTCSLVH*ANGISKSLLDC
Trigger: ACAGTCTAACAGTGACTTGGATATGCCATTTGCCAAGTGGACCAAGGAGCAGGTTTGCAATTGGCTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS CAA 72 bp ACCATCAACCCGTCCTTCATCAAACTGGGTCTTATATaGAGGGAGGCCAATGTCATCCAACCATCTAGTGAC +
Preference number: 6 (lower is better)
Translates to: TINPSFIKLGLI*REANVIQPSSD
Trigger: GTCACTAGATGGTTGGATGACATTGGCCTCCCTCAATATAAGACCCAGTTTGATGAAGGACGGGTTGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS CAA 72 bp TTGCCTTGGGCCAGTACCACCGTGTCTTGCATTTTCTaGTACCTGTTCAGGCACTGTCGAAGATCTTCTATT +
Preference number: 6 (lower is better)
Translates to: LPWASTTVSCIF*YLFRHCRRSSI
Trigger: AATAGAAGATCTTCGACAGTGCCTGAACAGGTACAAGAAAATGCAAGACACGGTGGTACTGGCCCAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318304.12
ENST00000537927.5
ENST00000542629.5
CDS CAA 72 bp TTACCTTGGGCCAGTACCACCGTGTCTTGCATTTTCTaGTACCTGTTCAGGCACTGTCGAAGATCTTCTATT +
Preference number: 6 (lower is better)
Translates to: LPWASTTVSCIF*YLFRHCRRSSI
Trigger: AATAGAAGATCTTCGACAGTGCCTGAACAGGTACAAGAAAATGCAAGACACGGTGGTACTGGCCCAAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228425.11
ENST00000537261.1
ENST00000540114.5
CDS CAA 90 bp CAGTTTGGTTCAAAGTTATTGATCCTCAGGACCTGGATGGCCCTTTaGATACTGAGATGGTGTAGCACACTTACAACCTTCAGAGACAGT +
Preference number: 6 (lower is better)
Translates to: QFGSKLLILRTWMAL*ILRWCSTLTTFRDS
Trigger: ACTGTCTCTGAAGGTTGTAAGTGTGCTACACCATCTCAGTATCAAAAGGGCCATCCAGGTCCTGAGGATCAATAACTTTGAACCAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS TCA 72 bp CGCAGCAAAGTCTTATTGGGTGGGATGTTCAATAACTaGGCCATTGTTTCTACGTTAAAACGAGGCTCTAGA +
Preference number: 6 (lower is better)
Translates to: RSKVLLGGMFNN*AIVSTLKRGSR
Trigger: TCTAGAGCCTCGTTTTAACGTAGAAACAATGGCTCAGTTATTGAACATCCCACCCAATAAGACTTTGCTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000540114.5
ENST00000540256.1
ENST00000542629.5
CDS GCA 72 bp ATTTTTCACACGTTTGTACTTGTCGATCAACCCTTGTaGTGTTTAAAATGGCTCCAAGCACAGTGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: IFHTFVLVDQPL*CLKWLQAQCGS
Trigger: GCTTCCACACTGTGCTTGGAGCCATTTTAAACAGCACAAGGGTTGATCGACAAGTACAAACGTGTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541633.5
CDS CCA 72 bp TTTCCTCCTTGTGGAAGAATTAGGGCAAAGGCATTTTaGTCATACGTACCTAAGTTTGGTGCACTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: FPPCGRIRAKAF*SYVPKFGALAV
Trigger: AACAGCAAGTGCACCAAACTTAGGTACGTATGACCAAAATGCCTTTGCCCTAATTCTTCCACAAGGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619325.1
CDS CAA 72 bp CACATTTTTCACACGTTTGTACTTGTCGATCAACCCTaGTGCTGTTTAAAATGGCTCCAAGCACAGTGTGGA +
Preference number: 6 (lower is better)
Translates to: HIFHTFVLVDQP*CCLKWLQAQCG
Trigger: TCCACACTGTGCTTGGAGCCATTTTAAACAGCACAAGGGTTGATCGACAAGTACAAACGTGTGAAAAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541633.5
CDS TCA 72 bp GTGCTAGCTGGAGTTTCTTTCGATGAAGTGAATGCTTaGTTCCAAGTTCCTTCTCTAGATCTTGTTGAGAAG +
Preference number: 6 (lower is better)
Translates to: VLAGVSFDEVNA*FQVPSLDLVEK
Trigger: CTTCTCAACAAGATCTAGAGAAGGAACTTGGAATCAAGCATTCACTTCATCGAAAGAAACTCCAGCTAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000540503.1
ENST00000542629.5
CDS TCA 72 bp GGCTCAGACATGTCATCTGGGTTGAATGTAGTTGATTaGCTTCTCCTAAGTCTAAAGAAGACAACACACATG +
Preference number: 6 (lower is better)
Translates to: GSDMSSGLNVVD*LLLSLKKTTHM
Trigger: CATGTGTGTTGTCTTCTTTAGACTTAGGAGAAGTCAATCAACTACATTCAACCCAGATGACATGTCTGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540503.1
CDS CAA 90 bp AAGACAACACACATGGCCAGTATTAGACCTGAGGAGGCCTTAGACTaGTTAATCAGAACATTTTTAACTAGTGCACCTACTGGAACTAAT +
Preference number: 6 (lower is better)
Translates to: KTTHMASIRPEEALD*LIRTFLTSAPTGTN
Trigger: ATTAGTTCCAGTAGGTGCACTAGTTAAAAATGTTCTGATTAACAAGTCTAAGGCCTCCTCAGGTCTAATACTGGCCATGTGTGTTGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540503.1
CDS TCA 72 bp GGCTCAGACATGTCATCTGGGTTGAATGTAGTTGATTaGCTTCTCCTAAGTTTTCCAAAGAGTTTCATGATA +
Preference number: 6 (lower is better)
Translates to: GSDMSSGLNVVD*LLLSFPKSFMI
Trigger: TATCATGAAACTCTTTGGAAAACTTAGGAGAAGTCAATCAACTACATTCAACCCAGATGACATGTCTGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000540114.5
ENST00000542629.5
CDS CAA 90 bp TATTCTTCACCATCTTCCTGTTTCTTCTTTCTCAAATTCCCAAAATaGCTAAAGGCAAGTTTCTTTGGCTTCACTTTGGCAGTAGCTGTT +
Preference number: 6 (lower is better)
Translates to: YSSPSSCFFFLKFPK*LKASFFGFTLAVAV
Trigger: AACAGCTACTGCCAAAGTGAAGCCAAAGAAACTTGCCTTTAGCAATTTTGGGAATTTGAGAAAGAAGAAACAGGAAGATGGTGAAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228425.11
ENST00000318304.12
ENST00000537927.5
ENST00000539326.1
ENST00000542629.5
CDS CAA 90 bp GATGGTATTCTATGGGAACACACAACCAGGATCCTAAATATTAAATaGCATTTTCTGTCTAAAAAGTCTGCTCCATGGAGTACAGTTACT +
Preference number: 6 (lower is better)
Translates to: DGILWEHTTRILNIK*HFLSKKSAPWSTVT
Trigger: AGTAACTGTACTCCATGGAGCAGACTTTTTAGACAGAAAATGCAATTTAATATTTAGGATCCTGGTTGTGTGTTCCCATAGAATACCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540256.1