RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPFIA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000143847

Ensembl transcript IDs: ENST00000272198.10, ENST00000295706.8, ENST00000367240.6, ENST00000447715.6, ENST00000486360.1, ENST00000594656.1, ENST00000597023.1, ENST00000599514.1, ENST00000599966.5, ENST00000600426.5, ENST00000600447.1, ENST00000601609.1

Found 1516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCAGGATCCTGGTCCTGGTGGAGGTTGCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGTGGCTTCACATCCACCCTGAGCTGC +
Preference number: 1 (lower is better)
Translates to: GPGSWSWWRLQCRPG*VQKRKGGFTSTLSC
Trigger: GCAGCTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCAGGATCCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR GCA 90 bp CCAGCAGGAGCTCCACCCGATGGTTGGGGCAGGGGACATTCCCACTaGCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: PAGAPPDGWGRGHSH*PLGLRLPEAIGSPS
Trigger: AGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGCTCCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 90 bp CCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTaGCCAGGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCAT +
Preference number: 1 (lower is better)
Translates to: PLLYRKGAAGFKPWH*PGAIAPSGLGALAH
Trigger: ATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACCTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp CTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCAGGCTGGGTCCAGAAGAGGAAGGGT +
Preference number: 1 (lower is better)
Translates to: LGRTIPACGPGSWSW*RLQCRPGWVQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR CCA 90 bp GATGGGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTaGCACTGCCCAGGTGCCATTGCTCCTTCTGGACTGGGTGCCCTG +
Preference number: 1 (lower is better)
Translates to: DGPLLYRKGAAGFKP*HCPGAIAPSGLGAL
Trigger: CAGGGCACCCAGTCCAGAAGGAGCAATGGCACCTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp GTGGAGGTTGCAGTGCAGACCAGGCTGGGTCCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAGCTGCCCTTCTCTCCTTCCCCCAGA +
Preference number: 1 (lower is better)
Translates to: VEVAVQTRLGPEEEG*LHIHPELPFSPSPR
Trigger: TCTGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTGCAACCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR CCA 90 bp TTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTaGTGGAGGTTGCAGTGCAGACCAGGCTGGGTCCAGAAGAGGAAG +
Preference number: 1 (lower is better)
Translates to: FLGRTIPACGPGSWS*WRLQCRPGWVQKRK
Trigger: CTTCCTCTTCTGGACCCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR CCA 90 bp GCTGCGTCTGAAATGACCCTTTCTTGGAAGGACCATCCCAGCCTGTaGCCCAGGATCCTGGTCCTGGTGGAGGTTGCAGTGCAGACCAGG +
Preference number: 1 (lower is better)
Translates to: AASEMTLSWKDHPSL*PRILVLVEVAVQTR
Trigger: CCTGGTCTGCACTGCAACCTCCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR TCA 90 bp GACCAGGCTGGGTCCAGAAGAGGAAGGGTGGCTTCACATCCACCCTaGGCTGCCCTTCTCTCCTTCCCCCAGAATCCCAAGCATGGACAA +
Preference number: 1 (lower is better)
Translates to: DQAGSRRGRVASHPP*AALLSFPQNPKHGQ
Trigger: TTGTCCATGCTTGGGATTCTGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGGACCCAGCCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR CCA 90 bp AGCTGCCCTTCTCTCCTTCCCCCAGAATCCCAAGCATGGACAACCTaGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGA +
Preference number: 1 (lower is better)
Translates to: SCPSLLPPESQAWTT*VPPQYQETPATSTG
Trigger: TCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAGGAGAGAAGGGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR CCA 90 bp TCCACCCTGAGCTGCCCTTCTCTCCTTCCCCCAGAATCCCAAGCATaGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACA +
Preference number: 1 (lower is better)
Translates to: STLSCPSLLPPESQA*TTWVPPQYQETPAT
Trigger: TGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR CCA 90 bp GGTTCCCATCATGCTGCTGGGGAAAGCAATGAAAATGGTGGCAGCTaGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACC +
Preference number: 1 (lower is better)
Translates to: GSHHAAGESNENGGS*ADLRNSGRRQSLPT
Trigger: GGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCCCAGCAGCATGATGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 90 bp GCCCTTCTCTCCTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTaGCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTA +
Preference number: 1 (lower is better)
Translates to: ALLSFPQNPKHGQPG*LHNTRKPQPHPPDL
Trigger: TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAGGAGAGAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR GCA 90 bp GGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCCCTaGTCAGAACTCAAGGTGATCAGGTTGCAAAGCAGCTGCTCCAGC +
Preference number: 1 (lower is better)
Translates to: GLGALAHYLTCKPSP*SELKVIRLQSSCSS
Trigger: GCTGGAGCAGCTGCTTTGCAACCTGATCACCTTGAGTTCTGAGCAGGGACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp GGGACATTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTaGCTCTCCCTCTGGCTGGTCTGCCTATGCTTCTTATTAGGTGGG +
Preference number: 1 (lower is better)
Translates to: GTFPLPFGLKATRGH*LSLWLVCLCFLLGG
Trigger: CCCACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAATGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp GGGGATGCCAAAACCAGCTGCCAGACCATTTGGCACAGCCAGACGTaGATAGACACCCTAAGATTGAATAGCCCAAGCAGGGCTGCGTCT +
Preference number: 1 (lower is better)
Translates to: GDAKTSCQTIWHSQT*IDTLRLNSPSRAAS
Trigger: AGACGCAGCCCTGCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR TCA 90 bp CCCATTATCTCACCTGCAAGCCTAGTCCCTGCTCAGAACTCAAGGTaGTCAGGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCA +
Preference number: 1 (lower is better)
Translates to: PIISPASLVPAQNSR*SGCKAAAPATCRMA
Trigger: TGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACCTGATCACCTTGAGTTCTGAGCAGGGACTAGGCTTGCAGGTGAGATAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 90 bp AAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGTCTGCCTATaGTTCTTATTAGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCT +
Preference number: 1 (lower is better)
Translates to: KATRGHWLSLWLVCL*FLLGGSLEFPHPHP
Trigger: AGGGTGAGGATGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 90 bp AGGGATGCTGGGAGCAGAGCTAGCAATGCATGGTTAGATCTGTTCTaGCCTAGAGTCAAGATCCGCACAACCTCCCTTCCCCATAGCCCA +
Preference number: 1 (lower is better)
Translates to: RDAGSRASNAWLDLF*PRVKIRTTSLPHSP
Trigger: TGGGCTATGGGGAAGGGAGGTTGTGCGGATCTTGACTCTAGGGCAGAACAGATCTAACCATGCATTGCTAGCTCTGCTCCCAGCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp CCATTGGCTCTCCCTCTGGCTGGTCTGCCTATGCTTCTTATTAGGTaGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCA +
Preference number: 1 (lower is better)
Translates to: PLALPLAGLPMLLIR*ELRVSPSSPLAQSS
Trigger: TGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGAGAGCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp GAGAGTGGTGATGCTGGGGATGCCAAAACCAGCTGCCAGACCATTTaGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCA +
Preference number: 1 (lower is better)
Translates to: ESGDAGDAKTSCQTI*HSQTWIDTLRLNSP
Trigger: TGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATCCCCAGCATCACCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATaGACCCAGCTATCCTGGCACAGCTGCTGCCTTACGACATGGCCA +
Preference number: 1 (lower is better)
Translates to: SLLNTSLQHFSRCSE*TQLSWHSCCLTTWP
Trigger: TGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp GGTTCTTCCCAAACTCAAATTTGGGATTCAGCTTATGCCAGGGCCTaGAATCTCTACCTCAGTCTTCCTCCTCCCAGCCTCACCATCCTG +
Preference number: 1 (lower is better)
Translates to: GSSQTQIWDSAYARA*NLYLSLPPPSLTIL
Trigger: CAGGATGGTGAGGCTGGGAGGAGGAAGACTGAGGTAGAGATTCCAGGCCCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGAAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp TGCTTCTTATTAGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTaGCTCAGAGCTCAGGGATCCATTTCTCTCTGGTTCTTCCCAAAC +
Preference number: 1 (lower is better)
Translates to: CFLLGGSLEFPHPHP*LRAQGSISLWFFPN
Trigger: GTTTGGGAAGAACCAGAGAGAAATGGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR TCA 90 bp AGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCTATTTTCTTCCTGGGAGGTCAGAGA +
Preference number: 1 (lower is better)
Translates to: RVAAFTNIGFPGPGT*ITVGEAIFFLGGQR
Trigger: TCTCTGACCTCCCAGGAAGAAAATAGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTaGGACATGAATCACTGTAGGAGAAGCTATTTTCTTCCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: KQESGCLHQHWISWT*DMNHCRRSYFLPGR
Trigger: CCTCCCAGGAAGAAAATAGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp TTGGGAATAATATTCCTACCAAATCAGGACCTGTATCCCTCAGCTTaGGTTCCCATCATGCTGCTGGGGAAAGCAATGAAAATGGTGGCA +
Preference number: 1 (lower is better)
Translates to: LGIIFLPNQDLYPSA*VPIMLLGKAMKMVA
Trigger: TGCCACCATTTTCATTGCTTTCCCCAGCAGCATGATGGGAACCCAAGCTGAGGGATACAGGTCCTGATTTGGTAGGAATATTATTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 90 bp CCAATCTTAGGAATCTCCATCATCTTACCATCCATTACCCAGGGATaGGAGCTGTTTATCTCCATCCAACTCATTTTCTGCTCAATAATC +
Preference number: 1 (lower is better)
Translates to: PILGISIILPSITQG*ELFISIQLIFCSII
Trigger: GATTATTGAGCAGAAAATGAGTTGGATGGAGATAAACAGCTCCCATCCCTGGGTAATGGATGGTAAGATGATGGAGATTCCTAAGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGGACCATCCCAGCCTGTaGCCCAGGATCCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQDHPSL*PRILVL
Trigger: CAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTC...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR TCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGGAACTGCAGTCACGGTaGTGGGTTGGGAGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQELQSR*WVGRVV
Trigger: CACCACTCTCCCAACCCATCACCGTGACTGCAGTTC...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR TCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCA +
Preference number: 2 (lower is better)
Translates to: GCKAAAPATCRMALHWPLGSWSW*RLQCRP
Trigger: TGGTCTGCACTGCAACCTCCACCAGGACCAGGATCC...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCCCATCCTCACCCTTaGCTCAGAGCTCAGGGATCC +
Preference number: 2 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKPHPHP*LRAQGS
Trigger: GGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGG...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAACCCCATCCTCACCCTTaGCTCAGAGCTCAGGGATCC +
Preference number: 2 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQPHPHP*LRAQGS
Trigger: GGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGG...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR GCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTGACGAGACTAGGAGCTaGGGAAGGAAGGGGAACGAG +
Preference number: 2 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGDETRS*GRKGNE
Trigger: CTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR GCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAAATGGGGGCAGGAACTaGAGTCACGGTGATGGGTTG +
Preference number: 2 (lower is better)
Translates to: GCKAAAPATCRMALHWPLNGGRN*SHGDGL
Trigger: CAACCCATCACCGTGACTGCAGTTCCTGCCCCCATT...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGCCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAG +
Preference number: 2 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWPEEEG*LHIHPE
Trigger: CTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGG...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTGTAGGATGGCACTaGACTGGCCCCTATCCAAGA +
Preference number: 2 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKPVGWH*TGPYPR
Trigger: TCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGG...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATCCTTCTGGACTGGGTaGCCTGGCCCATTATCTCAC +
Preference number: 2 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQSFWTG*PGPLSH
Trigger: GTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCCCAGAATCCCAAGCATaGACAACCTGGGTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGPESQA*TTWVPP
Trigger: TGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGG...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCA +
Preference number: 2 (lower is better)
Translates to: PATCRMALHWPLSKKHMPGSWSW*RLQCRP
Trigger: TGGTCTGCACTGCAACCTCCACCAGGACCAGGATCC...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGGCTTATGCCAGGGCCTaGAATCTCTACCTCAGTCTT +
Preference number: 2 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQAYARA*NLYLSL
Trigger: AAGACTGAGGTAGAGATTCCAGGCCCTGGCATAAGC...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGAGGAGCTCCACCCGATaGTTGGGGCAGGGGACATTC +
Preference number: 2 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMRSSTR*LGQGTF
Trigger: GAATGTCCCCTGCCCCAACCATCGGGTGGAGCTCCT...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCTTGCTCCTTCTGGACTaGGTGCCCTGGCCCATTATC +
Preference number: 2 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGLLLLD*VPWPII
Trigger: GATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAA...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGGGTTGGGAGAGTGGTaGTGCTGGGGATGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMGLGEW*CWGCQN
Trigger: GTTTTGGCATCCCCAGCATCACCACTCTCCCAACCC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKPGPGT*ITVGEA
Trigger: AGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGG...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGPGPGT*ITVGEA
Trigger: AGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGG...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGGATGCCAAAACCAGCTaGCAGACCATTTGGCACAGC +
Preference number: 2 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKDAKTS*QTIWHS
Trigger: GCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATC...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCGCCCATTATCTCACCTaGAAGCCTAGTCCCTGCTCA +
Preference number: 2 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGAHYLT*KPSPCS
Trigger: TGAGCAGGGACTAGGCTTGCAGGTGAGATAATGGGC...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCGGCAGGTGGCTGCCTTaGCCAAGCCTAAGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSGRWLP*PSLRES
Trigger: GCTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCC...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCA +
Preference number: 2 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMGSWSW*RLQCRP
Trigger: TGGTCTGCACTGCAACCTCCACCAGGACCAGGATCC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGGACCATCCCAGCCTGTaGCCCAGGATCCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: KQESGCLHQHWISWTWDMDHPSL*PRILVL
Trigger: CAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTC...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAAGCCTCACCATCCTGTaGGAGAATGGGGCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: PATCRMALHWPLSKKHMPSLTIL*ENGAFS
Trigger: ACTGAAGGCCCCATTCTCCCACAGGATGGTGAGGCT...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAACTGTATCCCTCAGCTTaGGTTCCCATCATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQLYPSA*VPIMLL
Trigger: CAGCAGCATGATGGGAACCCAAGCTGAGGGATACAG...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR CCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGTGGCACAGCCAGACGTaGATAGACACCCTAAGATTG +
Preference number: 2 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWWHSQT*IDTLRL
Trigger: CAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCA...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTGCTCCACCCGATGGTTaGGGCAGGGGACATTCCCAC +
Preference number: 2 (lower is better)
Translates to: KSTLKESDGYALPNSTNLAPPDG*GRGHSH
Trigger: GTGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGC...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGAGGAGCTCCACCCGATaGTTGGGGCAGGGGACATTC +
Preference number: 2 (lower is better)
Translates to: KQESGCLHQHWISWTWDMRSSTR*LGQGTF
Trigger: GAATGTCCCCTGCCCCAACCATCGGGTGGAGCTCCT...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCGGACAAGCAAGAGAGTaGCTGCCTTCACCAACATTG +
Preference number: 2 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGGQARE*LPSPTL
Trigger: CAATGTTGGTGAAGGCAGCCACTCTCTTGCTTGTCC...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSPGPGT*ITVGEA
Trigger: AGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCACCACTCCCAGCAACCTaGTGGCAGGGAGGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSPLPAT*WQGGQG
Trigger: TCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGG...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGACGAGACTAGGAGCTaGGGAAGGAAGGGGAACGAG +
Preference number: 2 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHDETRS*GRKGNE
Trigger: CTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCAAGGAGGCCTTAGTCTaGCTTTTCCCCAAACTTGAC +
Preference number: 2 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGKEALV*LFPKLD
Trigger: GTCAAGTTTGGGGAAAAGGCAGACTAAGGCCTCCTT...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGGCTCTCCCTCTGGCTaGTCTGCCTATGCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMGSPSG*SAYASY
Trigger: ATAAGAAGCATAGGCAGACCAGCCAGAGGGAGAGCC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCATGCCTTCACCAACATTaGATTTCCTGGACCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PATCRMALHWPLSKKHMPCLHQH*ISWTWD
Trigger: GTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCA...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGTGGATGAGGGTTAGGTaGTTTGGGGACAAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMWMRVR*FGDKQE
Trigger: CTCTTGCTTGTCCCCAAATCACCTAACCCTCATCCA...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGACATCCACCCTGAGCTaGCCTTCTCTCCTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQTSTLS*PSLLPP
Trigger: TGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGT...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCATCCCTCTGGCTGGTCTaGCTATGCTTCTTATTAGGT +
Preference number: 2 (lower is better)
Translates to: PATCRMALHWPLSKKHMPSLWLV*LCFLLG
Trigger: ACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGA...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTGGCACTGCCCAGGTaGCATTGCTCCTTCTGGACT +
Preference number: 2 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQLALPR*HCSFWT
Trigger: AGTCCAGAAGGAGCAATGGCACCTGGGCAGTGCCAG...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAGACCATCCCAGCCTGTaGCCCAGGATCCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSDHPSL*PRILVL
Trigger: CAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTC...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGTCCCAAACTCAAATTTaGGATTCAGCTTATGCCAGG +
Preference number: 2 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWSQTQI*DSAYAR
Trigger: CCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGA...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAATGCTTCTTATTAGGTaGGAGCTTAGAGTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: GCKAAAPATCRMALHWPLMLLIR*ELRVSP
Trigger: TGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCAT...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGAAGCTATTTTCTTCCTaGGAGGTCAGAGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKKLFSS*EVRERR
Trigger: CCTCCTTTCTCTGACCTCCCAGGAAGAAAATAGCTT...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CAA 90 bp TGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATaGAATAGCCCAAGCAGGGCTGCGTCTGAAATGACCCTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: CQTIWHSQTWIDTLR*NSPSRAASEMTLSW
Trigger: CCAAGAAAGGGTCATTTCAGACGCAGCCCTGCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR TCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTGGGCTGCGTCTGAAATaGCCCTTTCTTGGAAGGACC +
Preference number: 2 (lower is better)
Translates to: KSTLKESDGYALPNSTNLGLRLK*PFLGRT
Trigger: GGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCC...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGGGCTGCGTCTGAAATaGCCCTTTCTTGGAAGGACC +
Preference number: 2 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSGLRLK*PFLGRT
Trigger: GGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR GCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCGATGCCAAAACCAGCTaGCAGACCATTTGGCACAGC +
Preference number: 2 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSDAKTS*QTIWHS
Trigger: GCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATC...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGAATGGGGGCAGGAACTaGAGTCACGGTGATGGGTTG +
Preference number: 2 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQNGGRN*SHGDGL
Trigger: CAACCCATCACCGTGACTGCAGTTCCTGCCCCCATT...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTTCCTTCTGGACTGGGTaGCCTGGCCCATTATCTCAC +
Preference number: 2 (lower is better)
Translates to: KSTLKESDGYALPNSTNLSFWTG*PGPLSH
Trigger: GTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGA...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAG +
Preference number: 2 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNPEEEG*LHIHPE
Trigger: CTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR CCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCTCCCAAACTCAAATTTaGGATTCAGCTTATGCCAGG +
Preference number: 2 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGSQTQI*DSAYAR
Trigger: CCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGA...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCATGCTTCTTATTAGGTaGGAGCTTAGAGTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGMLLIR*ELRVSP
Trigger: TGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCAT...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGTGGATTTCCTGGACCTaGGACATGAATCACTGTAGG +
Preference number: 2 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMWISWT*DMNHCR
Trigger: CCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCA...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGATGCCTTCACCAACATTaGATTTCCTGGACCTGGGAC +
Preference number: 2 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGCLHQH*ISWTWD
Trigger: GTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCA...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTTGCCATTGCTCCTTCTaGACTGGGTGCCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGACHCSF*TGCPGP
Trigger: TGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCA...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGATGGACGAATATATTCTaGGATCCAGGGCAACCGGAA +
Preference number: 2 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGWTNIF*DPGQPE
Trigger: TTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCA...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTACATCCACCCTGAGCTaGCCTTCTCTCCTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGATSTLS*PSLLPP
Trigger: TGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGT...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAAAGGAGGCCTTAGTCTaGCTTTTCCCCAAACTTGAC +
Preference number: 2 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGKEALV*LFPKLD
Trigger: GTCAAGTTTGGGGAAAAGGCAGACTAAGGCCTCCTT...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTAAGCAAGAGAGTGGCTaGCTTCACCAACATTGGATT +
Preference number: 2 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSKQESG*LHQHWI
Trigger: AATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCCAGGATCCTGGTCCTaGTGGAGGTTGCAGTGCAGA +
Preference number: 2 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAPGSWS*WRLQCR
Trigger: TCTGCACTGCAACCTCCACCAGGACCAGGATCCTGG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCGAAATGACCCTTTCTTaGAAGGACCATCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSEMTLS*KDHPSL
Trigger: CAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTC...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACCCTGAAGGAGTCAGATaGCTATGCATTGCCCAACTC +
Preference number: 2 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHPEGVR*LCIAQL
Trigger: GAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGG...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CAA 90 bp AGCCAGCCCATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATaGCCCAACTCCACCAATCTTAGGAATCTCCATCATCTTACCATC +
Preference number: 2 (lower is better)
Translates to: SQPIKSTLKESDGYA*PNSTNLRNLHHLTI
Trigger: GATGGTAAGATGATGGAGATTCCTAAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATGGGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGCCTGAACATAAGTCTTaGACATTTTCAGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMPEHKS*TFSGTL
Trigger: CAAGGTGCCTGAAAATGTTCAAGACTTATGTTCAGG...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCAGACGAGACTAGGAGCTaGGGAAGGAAGGGGAACGAG +
Preference number: 2 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPDETRS*GRKGNE
Trigger: CTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACTTGGGATTCAGCTTATaGCAGGGCCTGGAATCTCTA +
Preference number: 2 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHLGFSL*QGLESL
Trigger: TAGAGATTCCAGGCCCTGGCATAAGCTGAATCCCAA...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATTTAAGCCCTGGCACTaGCCAGGTGCCATTGCTCCT +
Preference number: 2 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSFKPWH*PGAIAP
Trigger: AGGAGCAATGGCACCTGGGCAGTGCCAGGGCTTAAA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCACTATCCTGGCACAGCTaGTGCCTTACGACATGGCCA +
Preference number: 2 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSLSWHS*CLTTWP
Trigger: TGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGATAG...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACCAACACTTCTCAAGGTaGTCTGAATGGACCCAGCTA +
Preference number: 2 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHQHFSR*SEWTQL
Trigger: TAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTG...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGGAAATGACCCTTTCTTaGAAGGACCATCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQEMTLS*KDHPSL
Trigger: CAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTC...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTTGCCTTCACCAACATTaGATTTCCTGGACCTGGGAC +
Preference number: 2 (lower is better)
Translates to: KSTLKESDGYALPNSTNLCLHQH*ISWTWD
Trigger: GTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCA...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CAA 90 bp ATGCTTCTTATTAGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTaGGCTCAGAGCTCAGGGATCCATTTCTCTCTGGTTCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: MLLIRWELRVSPSSP*AQSSGIHFSLVLPK
Trigger: TTTGGGAAGAACCAGAGAGAAATGGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCCAAAATAGCCCTGGATaGGGGTTAGGTGATTTGGGG +
Preference number: 2 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCQNSPG*GLGDLG
Trigger: CCCCAAATCACCTAACCCTCATCCAGGGCTATTTTG...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCCATCAAGAGCACCCTaGAGGAGTCAGATGGCTATG +
Preference number: 2 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAPSRAP*RSQMAM
Trigger: CATAGCCATCTGACTCCTTCAGGGTGCTCTTGATGG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTTTGGGATTCAGCTTATaGCAGGGCCTGGAATCTCTA +
Preference number: 2 (lower is better)
Translates to: KSTLKESDGYALPNSTNLLGFSL*QGLESL
Trigger: TAGAGATTCCAGGCCCTGGCATAAGCTGAATCCCAA...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCGAAATGACCCTTTCTTaGAAGGACCATCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCEMTLS*KDHPSL
Trigger: CAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTC...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAAGAGCTAGCAATGCATaGTTAGATCTGTTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQRASNA*LDLFCP
Trigger: AGGGCAGAACAGATCTAACCATGCATTGCTAGCTCT...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGAAGCTATTTTCTTCCTaGGAGGTCAGAGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: KQESGCLHQHWISWTWDMKLFSS*EVRERR
Trigger: CCTCCTTTCTCTGACCTCCCAGGAAGAAAATAGCTT...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATGCTGCCTTACGACATaGCCAACAGTGGCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSCCLTT*PTVAGV
Trigger: AACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CAA 90 bp CTTGGGAATAATATTCCTACCAAATCAGGACCTGTATCCCTCAGCTaGGGTTCCCATCATGCTGCTGGGGAAAGCAATGAAAATGGTGGC +
Preference number: 2 (lower is better)
Translates to: LGNNIPTKSGPVSLS*GSHHAAGESNENGG
Trigger: GCCACCATTTTCATTGCTTTCCCCAGCAGCATGATGGGAACCCAAGCTGAGGGATACAGGTCCTGATTTGGTAGGAATATTATTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCCCAAACTCAAATTTaGGATTCAGCTTATGCCAGG +
Preference number: 2 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQSQTQI*DSAYAR
Trigger: CCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAAGGAGCTCCACCCGATaGTTGGGGCAGGGGACATTC +
Preference number: 2 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGRSSTR*LGQGTF
Trigger: GAATGTCCCCTGCCCCAACCATCGGGTGGAGCTCCT...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTAAGCTATTTTCTTCCTaGGAGGTCAGAGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: KSTLKESDGYALPNSTNLKLFSS*EVRERR
Trigger: CCTCCTTTCTCTGACCTCCCAGGAAGAAAATAGCTT...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTGGATTTCCTGGACCTaGGACATGAATCACTGTAGG +
Preference number: 2 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCWISWT*DMNHCR
Trigger: CCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCA...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTCAACATTGGATTTCCTaGACCTGGGACATGAATCAC +
Preference number: 2 (lower is better)
Translates to: KSTLKESDGYALPNSTNLQHWIS*TWDMNH
Trigger: GTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTG...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGGGTTGGGAGAGTGGTaGTGCTGGGGATGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGGLGEW*CWGCQN
Trigger: GTTTTGGCATCCCCAGCATCACCACTCTCCCAACCC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTCCTGAACATAAGTCTTaGACATTTTCAGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: KSTLKESDGYALPNSTNLPEHKS*TFSGTL
Trigger: CAAGGTGCCTGAAAATGTTCAAGACTTATGTTCAGG...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTTGGTTAGATCTGTTCTaGCCTAGAGTCAAGATCCGC +
Preference number: 2 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAWLDLF*PRVKIR
Trigger: GCGGATCTTGACTCTAGGGCAGAACAGATCTAACCA...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR TCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGGGCTGCGTCTGAAATaGCCCTTTCTTGGAAGGACC +
Preference number: 2 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGGLRLK*PFLGRT
Trigger: GGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCATCCCTCTGGCTGGTCTaGCTATGCTTCTTATTAGGT +
Preference number: 2 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPSLWLV*LCFLLG
Trigger: ACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGA...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAATCCAACTCATTTTCTaGTCAATAATCCCTCCATCT +
Preference number: 2 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQIQLIF*SIIPPS
Trigger: AGATGGAGGGATTATTGAGCAGAAAATGAGTTGGAT...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCATCCAACTCATTTTCTaGTCAATAATCCCTCCATCT +
Preference number: 2 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSIQLIF*SIIPPS
Trigger: AGATGGAGGGATTATTGAGCAGAAAATGAGTTGGAT...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGACCAGAATCCCAAGCATaGACAACCTGGGTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGPESQA*TTWVPP
Trigger: TGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGG...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGACCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAG +
Preference number: 2 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGPEEEG*LHIHPE
Trigger: CTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGG...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCAACATTGGATTTCCTaGACCTGGGACATGAATCAC +
Preference number: 2 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAQHWIS*TWDMNH
Trigger: GTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGCTTATGCCAGGGCCTaGAATCTCTACCTCAGTCTT +
Preference number: 2 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGAYARA*NLYLSL
Trigger: AAGACTGAGGTAGAGATTCCAGGCCCTGGCATAAGC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGATGGTTAGATCTGTTCTaGCCTAGAGTCAAGATCCGC +
Preference number: 2 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGWLDLF*PRVKIR
Trigger: GCGGATCTTGACTCTAGGGCAGAACAGATCTAACCA...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp GGAGGCCAGGGAACACTAAGGGAGAGCAAGGGCAGGTaGCTGCCTTGCCCAAGCCTAAGGGAGAGCCCACCC +
Preference number: 3 (lower is better)
Translates to: GGQGTLRESKGR*LPCPSLRESPP
Trigger: GGGTGGGCTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCCCTTGCTCTCCCTTAGTGTTCCCTGGCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp ACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCAGGCTGGGTCCAGAAG +
Preference number: 3 (lower is better)
Translates to: TIPACGPGSWSW*RLQCRPGWVQK
Trigger: CTTCTGGACCCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR-3UTR CAA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGTGGTCCTGGTGGAGGTaGCAGTGCAGACCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQWSWWR*QCRPGW
Trigger: CCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCA...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCGGCTACCAGAGGCCATaGGCTCTCCCTCTGGCTGGT +
Preference number: 3 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGGYQRP*ALPLAG
Trigger: ACCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCC...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 72 bp TACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTaGCCAGGTGCCATTGCTCCTTCTGGACTGGGTGCC +
Preference number: 3 (lower is better)
Translates to: YRKGAAGFKPWH*PGAIAPSGLGA
Trigger: GGCACCCAGTCCAGAAGGAGCAATGGCACCTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp TCCTGGTCCTGGTGGAGGTTGCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGTGGCTTCACATCCACC +
Preference number: 3 (lower is better)
Translates to: SWSWWRLQCRPG*VQKRKGGFTST
Trigger: GGTGGATGTGAAGCCACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR CCA 72 bp GCCCAGGTGCCATTGCTCCTTCTGGACTGGGTGCCCTaGCCCATTATCTCACCTGCAAGCCTAGTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: AQVPLLLLDWVP*PIISPASLVPA
Trigger: AGCAGGGACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGCATTCCCACTGCCCTTaGGGCTTAAGGCTACCAGAG +
Preference number: 3 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQHSHCP*GLRLPE
Trigger: CTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAATG...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp ACCCAGCTATCCTGGCACAGCTGCTGCCTTACGACATaGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: TQLSWHSCCLTT*PTVAGVVEGRG
Trigger: GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGATAGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGTGGTCCTGGTGGAGGTaGCAGTGCAGACCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMWSWWR*QCRPGW
Trigger: CCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCA...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAAGCTCCACCCGATGGTaGGGGCAGGGGACATTCCCA +
Preference number: 3 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGSSTRW*GQGTFP
Trigger: TGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGCT...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAAGCTCCACCCGATGGTaGGGGCAGGGGACATTCCCA +
Preference number: 3 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQSSTRW*GQGTFP
Trigger: TGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGCT...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR TCA 72 bp GGTAATGGGGTGCCGAGGGGGTGGACGAATATATTCTaGGATCCAGGGCAACCGGAAAGTCACGGACGAGAC +
Preference number: 3 (lower is better)
Translates to: GNGVPRGWTNIF*DPGQPESHGRD
Trigger: GTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCCCATTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR TCA 72 bp TGCTCAATAATCCCTCCATCTCCACTCCCAGCAACCTaGTGGCAGGGAGGCCAGGGAACACTAAGGGAGAGC +
Preference number: 3 (lower is better)
Translates to: CSIIPPSPLPAT*WQGGQGTLRES
Trigger: GCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGAGATGGAGGGATTATTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 72 bp TCCTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTaGCTCCACAATACCAGGAAACCCCAGCCACATCCA +
Preference number: 3 (lower is better)
Translates to: SFPQNPKHGQPG*LHNTRKPQPHP
Trigger: TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
3UTR GCA 72 bp GCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTaGACTGGCCCCTATCCAAGAAACACATGCCAGATG +
Preference number: 3 (lower is better)
Translates to: AKQLLQPPVGWH*TGPYPRNTCQM
Trigger: CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp CATGCTGCTGGGGAAAGCAATGAAAATGGTGGCAGCTaGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCC +
Preference number: 3 (lower is better)
Translates to: HAAGESNENGGS*ADLRNSGRRQS
Trigger: GGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCCCAGCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR TCA 72 bp TCACCTGCAAGCCTAGTCCCTGCTCAGAACTCAAGGTaGTCAGGTTGCAAAGCAGCTGCTCCAGCCACCTGT +
Preference number: 3 (lower is better)
Translates to: SPASLVPAQNSR*SGCKAAAPATC
Trigger: ACAGGTGGCTGGAGCAGCTGCTTTGCAACCTGATCACCTTGAGTTCTGAGCAGGGACTAGGCTTGCAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 72 bp GCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCCCTaGTCAGAACTCAAGGTGATCAGGTTGCAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: ALAHYLTCKPSP*SELKVIRLQSS
Trigger: GCTGCTTTGCAACCTGATCACCTTGAGTTCTGAGCAGGGACTAGGCTTGCAGGTGAGATAATGGGCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp GCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTaGCCCCTATCCAAGAAACACATGCCAGATGCTTTT +
Preference number: 3 (lower is better)
Translates to: AAAPATCRMALH*PLSKKHMPDAF
Trigger: AAAAGCATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAGGGCAGGTGGCTGCCTaGCCCAAGCCTAAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSGQVAA*PKPKGE
Trigger: CTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCCC...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 72 bp GGGAGCAGAGCTAGCAATGCATGGTTAGATCTGTTCTaGCCTAGAGTCAAGATCCGCACAACCTCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: GSRASNAWLDLF*PRVKIRTTSLP
Trigger: GGGAAGGGAGGTTGTGCGGATCTTGACTCTAGGGCAGAACAGATCTAACCATGCATTGCTAGCTCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp CTCCCTCTGGCTGGTCTGCCTATGCTTCTTATTAGGTaGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCT +
Preference number: 3 (lower is better)
Translates to: LPLAGLPMLLIR*ELRVSPSSPLA
Trigger: AGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAACATTCCCACTGCCCTTaGGGCTTAAGGCTACCAGAG +
Preference number: 3 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQHSHCP*GLRLPE
Trigger: CTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAATG...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGCTCCACCCGATGGTaGGGGCAGGGGACATTCCCA +
Preference number: 3 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSSSTRW*GQGTFP
Trigger: TGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGCT...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACCCTGTATCCCTCAGCTaGGGTTCCCATCATGCTGCT +
Preference number: 3 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHPVSLS*GSHHAA
Trigger: AGCAGCATGATGGGAACCCAAGCTGAGGGATACAGG...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 72 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTaGTCTGAATGGACCCAGCTATCCTGGCACAGCTGC +
Preference number: 3 (lower is better)
Translates to: SLLNTSLQHFSR*SEWTQLSWHSC
Trigger: GCAGCTGTGCCAGGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp TTAGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTaGCTCAGAGCTCAGGGATCCATTTCTCTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: LGGSLEFPHPHP*LRAQGSISLWF
Trigger: GAACCAGAGAGAAATGGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTGCCTTCACCAACATaGGATTTCCTGGACCTGGGA +
Preference number: 3 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQLPSPT*DFLDLG
Trigger: TCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAG...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR GCA 72 bp TGGTTCTTCCCAAACTCAAATTTGGGATTCAGCTTATaGCAGGGCCTGGAATCTCTACCTCAGTCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: WFFPNSNLGFSL*QGLESLPQSSS
Trigger: GGAGGAAGACTGAGGTAGAGATTCCAGGCCCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGAAGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR TCA 72 bp GCCTTCACCAACATTGGATTTCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCTATTTTCTTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: AFTNIGFPGPGT*ITVGEAIFFLG
Trigger: TCCCAGGAAGAAAATAGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp ATATTCCTACCAAATCAGGACCTGTATCCCTCAGCTTaGGTTCCCATCATGCTGCTGGGGAAAGCAATGAAA +
Preference number: 3 (lower is better)
Translates to: IFLPNQDLYPSA*VPIMLLGKAMK
Trigger: TTTCATTGCTTTCCCCAGCAGCATGATGGGAACCCAAGCTGAGGGATACAGGTCCTGATTTGGTAGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR-3UTR CAA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGTCCCCAAACTTGACTTaGGGCTCAATGTATATTCAA +
Preference number: 3 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQSPNLT*GSMYIQ
Trigger: TTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGA...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CCA 72 bp AGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTaGGACATGAATCACTGTAGGAGAAGCTATTTTCTT +
Preference number: 3 (lower is better)
Translates to: SGCLHQHWISWT*DMNHCRRSYFL
Trigger: AAGAAAATAGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGCGGCGCCGAGGTAGCTaGAGCCTCCGCCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGRRRGS*SLRRPS
Trigger: GCTTGGGCGGCGGAGGCTGCAGCTACCTCGGCGCCG...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR TCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGTGTGGAGCGGCCGCTaGGTGGTGGGGACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGVWSGR*VVGTRW
Trigger: CCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACAC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTCTCCGCGGAAGCGCTaGGCATGCCGCCGCGACCGT +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGSPRKR*ACRRDR
Trigger: ACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGTGTGGAGCGGCCGCTaGGTGGTGGGGACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEVWSGR*VVGTRW
Trigger: CCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACAC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGTCCATCCCGCACCCCTaGCCCCTGCTGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGSIPHP*PLLQGR
Trigger: TCTGCCCTGCAGCAGGGGGCAGGGGTGCGGGATGGA...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGTGGTGGGGACGCGCTaGCCAGGGACAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGVVGTR*PGTGPS
Trigger: TGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCAC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGCGGCCGCTGAGTGGTaGGGACGCGCTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEAAAEW*GRAGQG
Trigger: TCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGCGGCCGCTGAGTGGTaGGGACGCGCTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGAAAEW*GRAGQG
Trigger: TCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGGGAGCGGCCGCTGAGTaGTGGGGACGCGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWGAAAE*WGRAGQ
Trigger: CTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCC...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGGAGCGGCCGCTGAGTaGTGGGGACGCGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGGAAAE*WGRAGQ
Trigger: CTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAATGCCGCCGCGACCGTaGTGCTCCCGCGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPMPPRP*CSRGRK
Trigger: CTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCAT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGTGTGGAGCGGCCGCTaGGTGGTGGGGACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMVWSGR*VVGTRW
Trigger: CCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACAC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTCTCCGCGGAAGCGCTaGGCATGCCGCCGCGACCGT +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSPRKR*ACRRDR
Trigger: ACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGA...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCGCACCCCTGCCCCCTaGTGCAGGGCAGACACCTGC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPERTPAP*CRADTC
Trigger: GCAGGTGTCTGCCCTGCAGCAGGGGGCAGGGGTGCG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCATCCCGCTGGCGCACCTaGACAGCCGTCCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPSRWRT*TAVRAS
Trigger: GCTGGCACGGACGGCTGTGCAGGTGCGCCAGCGGGA...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCAAAGGCAGGGCCAGCTaGCGGGGCCAGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGKGRAS*RGQHPR
Trigger: CCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTT...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGCAGACACCTGCTGGTaGGCACCTGCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGADTCW*APASCS
Trigger: GGAGCAGCTGGCAGGTGCCCACCAGCAGGTGTCTGC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGCGGCGATGCACGCCTaGGGGTGCGTGTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGAAMHA*GCVCGC
Trigger: ACAACCACACACGCACCCCCAGGCGTGCATCGCCGC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGTGGTGGGGACGCGCTaGCCAGGGACAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEVVGTR*PGTGPS
Trigger: TGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCAC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGGTGGTGGGGACGCGCTaGCCAGGGACAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWVVGTR*PGTGPS
Trigger: TGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCAC...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAATGCCGCCGCGACCGTaGTGCTCCCGCGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLMPPRP*CSRGRK
Trigger: CTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCAT...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCAGGGTCCCCAGGGTaGACACACGGAAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPAGSPG*THGSPP
Trigger: CGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCCCTGGGGGCCATaGCTAGTCCCGGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGQPWGP*LVPEGG
Trigger: TCCGCCTTCCGGGACTAGCCATGGCCCCCAGGGCTG...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGGAGGAAGCCAGCCCTaGGGGCCATGGCTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGGGSQP*GPWLVP
Trigger: CGGGACTAGCCATGGCCCCCAGGGCTGGCTTCCTCC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGGAGACCCCCGAAGGTaGCTGGGCCTGGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGGDPRR*LGLALH
Trigger: GTGAAGCGCCAGGCCCAGTCACCTTCGGGGGTCTCC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGGAGACCCCCGAAGGTaGCTGGGCCTGGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQGDPRR*LGLALH
Trigger: GTGAAGCGCCAGGCCCAGTCACCTTCGGGGGTCTCC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACAGGGTCTGGGCATCTaGGTGGCCGCTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPQGLGI*VAAGGD
Trigger: GTCTCCCCCAGCGGCCACTCAGATGCCCAGACCCTG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGGTGTGGAGCGGCCGCTaGGTGGTGGGGACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKVWSGR*VVGTRW
Trigger: CCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACAC...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGCACTGGGCAGGGTCATaGCCCCCATTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGHWAGS*PPFGPG
Trigger: ACCTGGACCGAATGGGGGTCATGACCCTGCCCAGTG...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGGCCAATGGACGACTTaGTGCCCTTGCGCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGGQWTT*CPCAWR
Trigger: GCGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTCCATCCCGCACCCCTaGCCCCTGCTGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSIPHP*PLLQGR
Trigger: TCTGCCCTGCAGCAGGGGGCAGGGGTGCGGGATGGA...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGATGCACGCCTGGGGGTaGGTGTGTGGTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGMHAWG*VCGCAQ
Trigger: CTGGGCACAACCACACACGCACCCCCAGGCGTGCAT...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGAAAGGCAGGGCCAGCTaGCGGGGCCAGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGKGRAS*RGQHPR
Trigger: CCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTT...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGAAAGGCAGGGCCAGCTaGCGGGGCCAGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGKGRAS*RGQHPR
Trigger: CCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAAAGGCAGGGCCAGCTaGCGGGGCCAGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQKGRAS*RGQHPR
Trigger: CCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTT...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGCGGAGCTTGAGCCGGTaGAGGGCATTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGRSLSR*RALLMP
Trigger: CGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCG...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGGAGCCGGCTCTGTGTaGCCGCCAAGGTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGGAGSV*PPRSPD
Trigger: GTCAGGAGACCTTGGCGGCCACACAGAGCCGGCTCC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTCCATGTCCTCCTTCTaGGCCAGAGCCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGSMSSF*ARASRR
Trigger: CCTCCGGGAGGCTCTGGCCCAGAAGGAGGACATGGA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGCCCACCAGACCCCCTaGCTCATCCTCATCCACGTC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGAHQTP*LILIHV
Trigger: GACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGATTCGGTCCAGGTCCTaGGCAGCACTGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGIRSRS*AALREV
Trigger: CACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAAT...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGAGGCATGATCTTCTTTaGCGGGGCCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGRHDLL*RGRWGL
Trigger: CAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCT...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCAGCCCTGGGGGCCATaGCTAGTCCCGGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGQPWGP*LVPEGG
Trigger: TCCGCCTTCCGGGACTAGCCATGGCCCCCAGGGCTG...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCAGCCCTGGGGGCCATaGCTAGTCCCGGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEQPWGP*LVPEGG
Trigger: TCCGCCTTCCGGGACTAGCCATGGCCCCCAGGGCTG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGGAGGAAGCCAGCCCTaGGGGCCATGGCTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQGGSQP*GPWLVP
Trigger: CGGGACTAGCCATGGCCCCCAGGGCTGGCTTCCTCC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGTCCCGGAGGTCCCGCTaGTGCTTGCTGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEESRRSR*CLLLSS
Trigger: GGAGCTGAGCAGCAAGCATCAGCGGGACCTCCGGGA...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR TCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTAGTGTGGAGCGGCCGCTaGGTGGTGGGGACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLVWSGR*VVGTRW
Trigger: CCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACAC...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACTGGGCAGGGTCATaGCCCCCATTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGHWAGS*PPFGPG
Trigger: ACCTGGACCGAATGGGGGTCATGACCCTGCCCAGTG...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGTGCAGGGCAGACACCTaGTGGTGGGCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQCRADT*WWAPAS
Trigger: GCTGGCAGGTGCCCACCAGCAGGTGTCTGCCCTGCA...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATACCCCTGCCCCCTGCTaGAGGGCAGACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNTPAPC*RADTCW
Trigger: CCAGCAGGTGTCTGCCCTGCAGCAGGGGGCAGGGGT...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGACCCCTGCCCCCTGCTaGAGGGCAGACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMTPAPC*RADTCW
Trigger: CCAGCAGGTGTCTGCCCTGCAGCAGGGGGCAGGGGT...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGCCTTGCGCATCGTCTaGTGCAGCTTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGALRIV*CSFCSA
Trigger: GGCAGAGCAGAAGCTGCAGCAGACGATGCGCAAGGC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGCCCTTGTGGTGGTGCTaGTCCTCAATCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGPLWWC*SSICRW
Trigger: CCAGCGGCAGATTGAGGAGCAGCACCACCACAAGGG...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCGGCCCTTGTGGTGGTaGTGCTCCTCAATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGRPLWW*CSSICR
Trigger: GCGGCAGATTGAGGAGCAGCACCACCACAAGGGCCG...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGAACCGCACGTCTGCTaGACTGCCCATGTGCGACCT +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGEPHVC*TAHVRP
Trigger: AGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGGAGAACCGCACGTCTaGTGCACTGCCCATGTGCGA +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGGEPHV*CTAHVR
Trigger: TCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGAGGGACTCACAGGGTTaGCACCTGGACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGRDSQG*HLDPLP
Trigger: GGGGAGGGGGTCCAGGTGCCAACCCTGTGAGTCCCT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGCCTTCTCCTCACACTaGCGGTGCAGGGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGAFSSH*RCRDSL
Trigger: CAAGGAGTCCCTGCACCGCCAGTGTGAGGAGAAGGC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGACAGGCGGCCCTTGTaGTGGTGCTGCTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGDRRPL*WCCSSI
Trigger: GATTGAGGAGCAGCACCACCACAAGGGCCGCCTGTC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACCTCGGCCCTTCAGCTaGTCCACCTCTTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPPRPFS*STSWRS
Trigger: GCTGCGCCAAGAGGTGGACCAGCTGAAGGGCCGAGG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCTGGGGGTGCGTGTGTaGTTGTGCCCAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGLGVRV*LCPGRT
Trigger: GGTTCTCCCTGGGCACAACCACACACGCACCCCCAG...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGCGGCGATGCACGCCTaGGGGTGCGTGTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEAAMHA*GCVCGC
Trigger: ACAACCACACACGCACCCCCAGGCGTGCATCGCCGC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGGGCCGTCAGAGAGGTaGGGATGGAACCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGGPSER*GWNHAC
Trigger: GCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGGCGGCCGCTGAGTGGTaGGGACGCGCTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRAAAEW*GRAGQG
Trigger: TCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGC...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCGGAGCGGCCGCTGAGTaGTGGGGACGCGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVGAAAE*WGRAGQ
Trigger: CTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCC...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACGGAGCGGCCGCTGAGTaGTGGGGACGCGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHGAAAE*WGRAGQ
Trigger: CTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCC...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGGAGCGGCCGCTGAGTaGTGGGGACGCGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSGAAAE*WGRAGQ
Trigger: CTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGCCATCCCGACTCAGCTaGATCAGCCTGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGPSRLS*ISLPFS
Trigger: GGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGG...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAATGCCGCCGCGACCGTaGTGCTCCCGCGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQMPPRP*CSRGRK
Trigger: CTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCAT...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAATGCCGCCGCGACCGTaGTGCTCCCGCGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPMPPRP*CSRGRK
Trigger: CTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCAT...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCAGGCATGATCTTCTTTaGCGGGGCCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGRHDLL*RGRWGL
Trigger: CAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCT...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTTCATCTTTTCCCGCTaGCGCACCCGTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGFIFSR*RTRASS
Trigger: GGAGCTGGCACGGGTGCGCCAGCGGGAAAAGATGAA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367240.6
ENST00000600426.5
CDS-3UTR TCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGGCCGCCTCATCAGGGTaGTGGCAGCCGGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKAASSG*WQPEDS
Trigger: GCTGTCCTCCGGCTGCCATCACCCTGATGAGGCGGC...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR TCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCGCCGCCTCATCAGGGTaGTGGCAGCCGGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGAASSG*WQPEDS
Trigger: GCTGTCCTCCGGCTGCCATCACCCTGATGAGGCGGC...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR TCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAGTGTGGAGCGGCCGCTaGGTGGTGGGGACGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEVWSGR*VVGTRW
Trigger: CCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACAC...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCACTGGGCAGGGTCATaGCCCCCATTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGHWAGS*PPFGPG
Trigger: ACCTGGACCGAATGGGGGTCATGACCCTGCCCAGTG...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCACTGGGCAGGGTCATaGCCCCCATTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQHWAGS*PPFGPG
Trigger: ACCTGGACCGAATGGGGGTCATGACCCTGCCCAGTG...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCCGCAGCGTCCTGGGTaGGGAAGGAGGAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQPQRPG*GRRRSL
Trigger: GAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGG...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGGCCAATGGACGACTTaGTGCCCTTGCGCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGGQWTT*CPCAWR
Trigger: GCGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGGCCAATGGACGACTTaGTGCCCTTGCGCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGGQWTT*CPCAWR
Trigger: GCGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGGTGCAGGGCATTGCTaGTGCCGATCTCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGGAGHC*CRSPAG
Trigger: TCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACTCTCCGCGGAAGCGCTaGGCATGCCGCCGCGACCGT +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNSPRKR*ACRRDR
Trigger: ACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGA...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCTCTCCGCGGAAGCGCTaGGCATGCCGCCGCGACCGT +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVSPRKR*ACRRDR
Trigger: ACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGA...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGACCCCACCACACCAGTaGTGGGCCTCTCCTCTACCG +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGTPPHQ*WASPLP
Trigger: CGGTAGAGGAGAGGCCCATCACTGGTGTGGTGGGGT...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGACCCCACCACACCAGTaGTGGGCCTCTCCTCTACCG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGTPPHQ*WASPLP
Trigger: CGGTAGAGGAGAGGCCCATCACTGGTGTGGTGGGGT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTACCACTCCCAGCAACCTaGTGGCAGGGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLPLPAT*WQGGQG
Trigger: TCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGG...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTCCTCACACTGGCGGTaGAGGGACTCCTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGSSHWR*RDSLLA
Trigger: GGCCAACAAGGAGTCCCTGCACCGCCAGTGTGAGGA...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACATCCCGCTGGCGCACCTaGACAGCCGTCCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTSRWRT*TAVRAS
Trigger: GCTGGCACGGACGGCTGTGCAGGTGCGCCAGCGGGA...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCCTCCAGGGCAGCCATaGGCTCCTTCAGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQPPGQP*APSGGA
Trigger: AGCTCCACCTGAAGGAGCGCATGGCTGCCCTGGAGG...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGCACGTCTGCTGCACTaGCCATGTGCGACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGARLLH*PCATWS
Trigger: ACTCCAGGTCGCACATGGGCAGTGCAGCAGACGTGC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGGAGAACCGCACGTCTaGTGCACTGCCCATGTGCGA +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGGEPHV*CTAHVR
Trigger: TCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGATGCACGCCTGGGGGTaGGTGTGTGGTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGMHAWG*VCGCAQ
Trigger: CTGGGCACAACCACACACGCACCCCCAGGCGTGCAT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAATGCACGCCTGGGGGTaGGTGTGTGGTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPMHAWG*VCGCAQ
Trigger: CTGGGCACAACCACACACGCACCCCCAGGCGTGCAT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGGCTGCTGTTGCTGCTaGTGGGGTTGCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGGCCCC*WGCCPD
Trigger: ATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAGCC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGGCAGGTGGCTGCCTTaGCCAAGCCTAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEGRWLP*PSLRES
Trigger: GCTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGGGTCTGAGCCCAGCTaGCCTCCTCACTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGGSEPS*PPHCLF
Trigger: AAACAGACAGTGAGGAGGGCAGCTGGGCTCAGACCC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACGCCGCCCCCGACCCGTaGAGCCCGACACGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNAAPDP*SPTRPR
Trigger: TCTAGGACGTGTCGGGCTGCACGGGTCGGGGGCGGC...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGGTCCCGCTCGTGTATaGCATCCTGGAGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGGPARV*HPGAGS
Trigger: AGAGCCGGCTCCAGGATGCCATACACGAGCGGGACC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTGCCCATGTGCGACCTaGAGTGGACGCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGCPCAT*SGRHPQ
Trigger: TTGTGGATGGCGTCCACTCCAGGTCGCACATGGGCA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCTGGGGGTGCGTGTGTaGTTGTGCCCAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPELGVRV*LCPGRT
Trigger: GGTTCTCCCTGGGCACAACCACACACGCACCCCCAG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGCCCACCAGACCCCCTaGCTCATCCTCATCCACGTC +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQAHQTP*LILIHV
Trigger: GACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGCCCACCAGACCCCCTaGCTCATCCTCATCCACGTC +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGAHQTP*LILIHV
Trigger: GACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGTCTGGGCATCTGAGTaGCCGCTGGGGGAGACAACA +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGVWASE*PLGETT
Trigger: TGTTGTCTCCCCCAGCGGCCACTCAGATGCCCAGAC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCATCATGGCCAGGGTCTaGGCATCTGAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGIMARV*ASEWPL
Trigger: CAGCGGCCACTCAGATGCCCAGACCCTGGCCATGAT...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGGGCCGTCAGAGAGGTaGGGATGGAACCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQGPSER*GWNHAC
Trigger: GCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGTGGTGGGGACGCGCTaGCCAGGGACAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSVVGTR*PGTGPS
Trigger: TGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCAC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGCGGCCGCTGAGTGGTaGGGACGCGCTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSAAAEW*GRAGQG
Trigger: TCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGC...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAGGAGCGGCCGCTGAGTaGTGGGGACGCGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEGAAAE*WGRAGQ
Trigger: CTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCC...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTGCTGTTGCTGCTGCTaGGGTTGCTGCCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGCCCCC*GCCPDP
Trigger: AGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGTGCTGTTGCTGCTGCTaGGGTTGCTGCCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGCCCCC*GCCPDP
Trigger: AGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCA...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTTGTGCAGGGAGTCCTaGCTGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGLCRES*LLLLLL
Trigger: CAGCAGCAGCAACAGCAGCCAGGACTCCCTGCACAA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTGGGGCAGAGGGGCTaGTCAATGACACCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGVGQRG*SMTPSP
Trigger: AGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCAC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACGCAGGGTCCCCAGGGTaGACACACGGAAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHAGSPG*THGSPP
Trigger: CGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGC...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGCAGGGTCCCCAGGGTaGACACACGGAAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSAGSPG*THGSPP
Trigger: CGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGAGGCATGATCTTCTTTaGCGGGGCCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGRHDLL*RGRWGL
Trigger: CAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAAGGCATGATCTTCTTTaGCGGGGCCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPRHDLL*RGRWGL
Trigger: CAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCAGCCCTGGGGGCCATaGCTAGTCCCGGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKQPWGP*LVPEGG
Trigger: TCCGCCTTCCGGGACTAGCCATGGCCCCCAGGGCTG...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGGSWSW*RLQCRP
Trigger: TGGTCTGCACTGCAACCTCCACCAGGACCAGGATCC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGACCATCCCAGCCTGTaGCCCAGGATCCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGDHPSL*PRILVL
Trigger: CAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGCTCCACCCGATGGTTaGGGCAGGGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGAPPDG*GRGHSH
Trigger: GTGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGCAGCCACCTGTAGGATaGCACTGCACTGGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGQPPVG*HCTGPY
Trigger: ATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTG...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGAGAGCAAGGGCAGGTaGCTGCCTTGCCCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGESKGR*LPCPSL
Trigger: TAGGCTTGGGCAAGGCAGCCACCTGCCCTTGCTCTC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGGGCGGTCCCCCTCATTaGTTGTGGGCATCACCTCAC +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWGGPPH*LWASPH
Trigger: GTGAGGTGATGCCCACAATCAATGAGGGGGACCGCC...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCGGAGACCCCCGAAGGTaGCTGGGCCTGGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVGDPRR*LGLALH
Trigger: GTGAAGCGCCAGGCCCAGTCACCTTCGGGGGTCTCC...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTGGTGCTCAAACAGTaGCTTGAGGGCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGVVLKQ*LEGLQH
Trigger: GTGCTGAAGGCCCTCAAGTCACTGTTTGAGCACCAC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGTGGTGCTCAAACAGTaGCTTGAGGGCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGVVLKQ*LEGLQH
Trigger: GTGCTGAAGGCCCTCAAGTCACTGTTTGAGCACCAC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGCGGTTGTTGTTAGGGTaGCCAGTCGCTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMRLLLG*PVAPGP
Trigger: AGGCCCGGGAGCGACTGGTCACCCTAACAACAACCG...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTCCCGGAGGTCCCGCTaGTGCTTGCTGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGSRRSR*CLLLSS
Trigger: GGAGCTGAGCAGCAAGCATCAGCGGGACCTCCGGGA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGTTCTTCAGCCTTGGTaGGGGCTGCAATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGVLQPW*GLQFSG
Trigger: CCCAGAGAATTGCAGCCCTCACCAAGGCTGAAGAAC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR TCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAACAGGGTCTGGGCATCTaGGTGGCCGCTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQQGLGI*VAAGGD
Trigger: GTCTCCCCCAGCGGCCACTCAGATGCCCAGACCCTG...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGGGCCAATGGACGACTTaGTGCCCTTGCGCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWGQWTT*CPCAWR
Trigger: GCGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCC...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGAATGACACCATCTCCTaGATGGCCAGGCGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGNDTIS*MARRSL
Trigger: CAAGCTCCGCCTGGCCATTCAGGAGATGGTGTCATT...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGGAGAGGCTGGGACTaGGTCTCCCTTACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNGRGWD*VSLTAS
Trigger: GCTGGCTGTAAGGGAGACTCAGTCCCAGCCTCTCCC...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGCCCATGTGCGACCTTaGGCGGTGATGGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNAHVRP*AVMGER
Trigger: TCTCTCCCCCATCACCGCTCAAGGTCGCACATGGGC...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR GCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCTGCAGGGCAGACACCTaGTGGTGGGCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGCRADT*WWAPAS
Trigger: GCTGGCAGGTGCCCACCAGCAGGTGTCTGCCCTGCA...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGCGCACCCCTGCCCCCTaGTGCAGGGCAGACACCTGC +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMRTPAP*CRADTC
Trigger: GCAGGTGTCTGCCCTGCAGCAGGGGGCAGGGGTGCG...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGGTCCCGCTGATGCTTaGTGCTCAGCTCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGGPADA*CSAPPT
Trigger: AGTCGGAGGAGCTGAGCAGCAAGCATCAGCGGGACC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGGTCCCGCTGATGCTTaGTGCTCAGCTCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEGPADA*CSAPPT
Trigger: AGTCGGAGGAGCTGAGCAGCAAGCATCAGCGGGACC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGTCCTCACACTGGCGGTaGAGGGACTCCTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWSSHWR*RDSLLA
Trigger: GGCCAACAAGGAGTCCCTGCACCGCCAGTGTGAGGA...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGTCTGCTGCAGCTTCTaGTCTGCCACCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEVCCSF*SATSSS
Trigger: GCTGCTGGAGGTGGCAGAGCAGAAGCTGCAGCAGAC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGCCTTGCGCATCGTCTaGTGCAGCTTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEALRIV*CSFCSA
Trigger: GGCAGAGCAGAAGCTGCAGCAGACGATGCGCAAGGC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTCTGGCAGCGTCTCTaGCTTGCGCATCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGLWQRL*LAHRLL
Trigger: CAGCAGACGATGCGCAAGGCAGAGACGCTGCCAGAG...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGAGCTGTCCCTCCAGCTaGCGCAGGTGCTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGSCPSS*RRCSSM
Trigger: CATTGAGGAGCACCTGCGGCAGCTGGAGGGACAGCT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAGCTGTCCCTCCAGCTaGCGCAGGTGCTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEESCPSS*RRCSSM
Trigger: CATTGAGGAGCACCTGCGGCAGCTGGAGGGACAGCT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCTGTCCCTCCAGCTaGCGCAGGTGCTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSCPSS*RRCSSM
Trigger: CATTGAGGAGCACCTGCGGCAGCTGGAGGGACAGCT...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGCCTCCAGGGCAGCCATaGGCTCCTTCAGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWPPGQP*APSGGA
Trigger: AGCTCCACCTGAAGGAGCGCATGGCTGCCCTGGAGG...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGGAGAACCGCACGTCTaGTGCACTGCCCATGTGCGA +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGGEPHV*CTAHVR
Trigger: TCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTGCGTGTGTGGTTGTaGCCAGGGAGAACCGCACGT +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPVRVWL*PGRTAR
Trigger: ACGTGCGGTTCTCCCTGGGCACAACCACACACGCAC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGTGCGTGTGTGGTTGTaGCCAGGGAGAACCGCACGT +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEVRVWL*PGRTAR
Trigger: ACGTGCGGTTCTCCCTGGGCACAACCACACACGCAC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATATGCACGCCTGGGGGTaGGTGTGTGGTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNMHAWG*VCGCAQ
Trigger: CTGGGCACAACCACACACGCACCCCCAGGCGTGCAT...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGAGACTCTTCCCTCAATaGCGAGTAGCGGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGRLFPQ*RVAAMH
Trigger: GTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCT...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATAAAAGGCAGGGCCAGCTaGCGGGGCCAGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIKGRAS*RGQHPR
Trigger: CCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTT...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGGTTTAGGGCTTCCATaGTGCCACTGGTTACACGCG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGGLGLP*CHWLHA
Trigger: CGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGTTTAGGGCTTCCATaGTGCCACTGGTTACACGCG +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGGLGLP*CHWLHA
Trigger: CGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGGCTGCTGTTGCTGCTaGTGGGGTTGCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEGCCCC*WGCCPD
Trigger: ATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAGCC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGGCTGCTGTTGCTGCTaGTGGGGTTGCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQGCCCC*WGCCPD
Trigger: ATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAGCC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGAGTCCTGGCTGCTGTTaGTGCTGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWSPGCC*CCWGCC
Trigger: GCAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACT...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAGTCCTGGCTGCTGTTaGTGCTGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEESPGCC*CCWGCC
Trigger: GCAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCTGGCACTGCCCAGGTaGCATTGCTCCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGLALPR*HCSFWT
Trigger: AGTCCAGAAGGAGCAATGGCACCTGGGCAGTGCCAG...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGTCCTGGCACAGCTGCTaGCTTACGACATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGSWHSC*LTTWPT
Trigger: TGTTGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGA...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGTCTCAGAGTGGGCAGTaGCAGGCGAGTGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWSQSGQ*QASGQV
Trigger: CACCTGTCCACTCGCCTGGCACTGCCCACTCTGAGA...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGTCCCGCTCGTGTATaGCATCCTGGAGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNGPARV*HPGAGS
Trigger: AGAGCCGGCTCCAGGATGCCATACACGAGCGGGACC...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGAGTTAAGGTGGCGCTaGAGCTGGTCCCGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEELRWR*SWSRSC
Trigger: ACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGAAGGTGGCAAATTCCTaGGGGAGGGCGGAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGKVANS*GRAELR
Trigger: CCTTAACTCCGCCCTCCCCCAGGAATTTGCCACCTT...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAACCCCCGAAGGTGACTaGGCCTGGCGCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLTPEGD*AWRFTT
Trigger: TGTGGTGAAGCGCCAGGCCCAGTCACCTTCGGGGGT...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGCACCTCCACCTCACTaGAGACCCCCGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGAPPPH*RPPKVT
Trigger: AGTCACCTTCGGGGGTCTCCAGTGAGGTGGAGGTGC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGCCTTCTCCTCACACTaGCGGTGCAGGGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQAFSSH*RCRDSL
Trigger: CAAGGAGTCCCTGCACCGCCAGTGTGAGGAGAAGGC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGCCTTCTCCTCACACTaGCGGTGCAGGGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEAFSSH*RCRDSL
Trigger: CAAGGAGTCCCTGCACCGCCAGTGTGAGGAGAAGGC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGAGGCGGCCCTTGTGGTaGTGCTGCTCCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGRRPLW*CCSSIC
Trigger: GCAGATTGAGGAGCAGCACCACCACAAGGGCCGCCT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAGGCGGCCCTTGTGGTaGTGCTGCTCCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEERRPLW*CCSSIC
Trigger: GCAGATTGAGGAGCAGCACCACCACAAGGGCCGCCT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGACAGGCGGCCCTTGTaGTGGTGCTGCTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEDRRPL*WCCSSI
Trigger: GATTGAGGAGCAGCACCACCACAAGGGCCGCCTGTC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTCCTCGGCCCTTCAGCTaGTCCACCTCTTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGPRPFS*STSWRS
Trigger: GCTGCGCCAAGAGGTGGACCAGCTGAAGGGCCGAGG...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTGCGGCGATGCACGCCTaGGGGTGCGTGTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGAAMHA*GCVCGC
Trigger: ACAACCACACACGCACCCCCAGGCGTGCATCGCCGC...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGCATCTGAGTGGCCGCTaGGGGAGACAACATCCGCAG +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEHLSGR*GRQHPQ
Trigger: CTGCGGATGTTGTCTCCCCCAGCGGCCACTCAGATG...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGTCTGGGCATCTGAGTaGCCGCTGGGGGAGACAACA +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEVWASE*PLGETT
Trigger: TGTTGTCTCCCCCAGCGGCCACTCAGATGCCCAGAC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGATCATGGCCAGGGTCTaGGCATCTGAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGIMARV*ASEWPL
Trigger: CAGCGGCCACTCAGATGCCCAGACCCTGGCCATGAT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGCCGCGCGGAGCTCCGTaGACTCCTTCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWPRGAP*TPSLPE
Trigger: TTCAGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGG...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCCGCGCGGAGCTCCGTaGACTCCTTCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQPRGAP*TPSLPE
Trigger: TTCAGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGG...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTCAGAGAGGTGGGGATaGAACCACGCTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGSERWG*NHACAA
Trigger: AGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGA...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCTAGCCGCAGCGTCCTaGGTGAGGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPELAAAS*VRKEEK
Trigger: CTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACTAGCCGCAGCGTCCTaGGTGAGGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPLAAAS*VRKEEK
Trigger: CTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGTCCTTCTTGGTGAGGTaGTCCAGCATGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGSFLVR*SSMRAS
Trigger: GGACGCCCGCATGCTGGACCACCTCACCAAGAAGGA...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTCCTTCTTGGTGAGGTaGTCCAGCATGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPESFLVR*SSMRAS
Trigger: GGACGCCCGCATGCTGGACCACCTCACCAAGAAGGA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGATCACTTGGCGTGCCTaGGTGTTCTGTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGITWRA*VFCVGI
Trigger: GATCCCCACACAGAACACCCAGGCACGCCAAGTGAT...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACGCAGGGTCCCCAGGGTaGACACACGGAAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNAGSPG*THGSPP
Trigger: CGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGC...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGCAGGGTCCCCAGGGTaGACACACGGAAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPAGSPG*THGSPP
Trigger: CGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGC...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTAGGAGGAAGCCAGCCCTaGGGGCCATGGCTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLGGSQP*GPWLVP
Trigger: CGGGACTAGCCATGGCCCCCAGGGCTGGCTTCCTCC...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGGAGGAAGCCAGCCCTaGGGGCCATGGCTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQGGSQP*GPWLVP
Trigger: CGGGACTAGCCATGGCCCCCAGGGCTGGCTTCCTCC...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGGGAGGAAGCCAGCCCTaGGGGCCATGGCTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRGGSQP*GPWLVP
Trigger: CGGGACTAGCCATGGCCCCCAGGGCTGGCTTCCTCC...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGCCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGPEEEG*LHIHPE
Trigger: CTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGG...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTGTGGCCCAGGATCCTaGTCCTGGTGGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQCGPGS*SWWRLQ
Trigger: CTGCAACCTCCACCAGGACCAGGATCCTGGGCCACA...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGCTCCACCCGATGGTTaGGGCAGGGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNAPPDG*GRGHSH
Trigger: GTGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGC...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGGCCGCCAAGGTCTCCTaGCTCTCCCGAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWAAKVS*LSRRDS
Trigger: GGAGTCTCTTCGGGAGAGTCAGGAGACCTTGGCGGC...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGCACAGTCATCCGCAGTaGCCGTTCATGGCGGGACAC +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMHSHPQ*PFMAGH
Trigger: GTGTCCCGCCATGAACGGTCACTGCGGATGACTGTG...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCAGGGTCTGGGCATCTaGGTGGCCGCTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNQGLGI*VAAGGD
Trigger: GTCTCCCCCAGCGGCCACTCAGATGCCCAGACCCTG...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGCACTGGGCAGGGTCATaGCCCCCATTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGHWAGS*PPFGPG
Trigger: ACCTGGACCGAATGGGGGTCATGACCCTGCCCAGTG...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCCCGCAGCGTCCTGGGTaGGGAAGGAGGAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGPQRPG*GRRRSL
Trigger: GAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGG...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGCCATCTCTTCATGGGTaGCCCAGACATTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGPSLHG*PRHSQK
Trigger: CTTCTGGGAATGTCTGGGTCACCCATGAAGAGATGG...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGGGCTGCGTCTGAAATaGCCCTTTCTTGGAAGGACC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGGLRLK*PFLGRT
Trigger: GGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGAACTGCAGTCACGGTaGTGGGTTGGGAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEELQSR*WVGRVV
Trigger: CACCACTCTCCCAACCCATCACCGTGACTGCAGTTC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCCCACTCCCAGCAACCTaGTGGCAGGGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGIPLPAT*WQGGQG
Trigger: TCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGG...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACCACTCCCAGCAACCTaGTGGCAGGGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLPLPAT*WQGGQG
Trigger: TCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGG...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACACAGGCCCTGAGGACTaGGACCCCCAGCTCACACCC +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNTGPED*DPQLTP
Trigger: GGGTGTGAGCTGGGGGTCTCAGTCCTCAGGGCCTGT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR GCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAGCTGCTCCCGACACATaGTCAGCTCCCGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLAAPDT*SAPGLR
Trigger: CCTTAACCCGGGAGCTGAGCATGTGTCGGGAGCAGC...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATATGCAGGGCAGACACCTaGTGGTGGGCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKICRADT*WWAPAS
Trigger: GCTGGCAGGTGCCCACCAGCAGGTGTCTGCCCTGCA...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCATTGCGCATCGTCTGCTaGAGCTTCTGCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPLRIVC*SFCSAT
Trigger: GGTGGCAGAGCAGAAGCTGCAGCAGACGATGCGCAA...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAGCCTTGGTGAGGGCTaGAATTCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEESLGEG*NSLGQL
Trigger: GAGCTGGCCCAGAGAATTGCAGCCCTCACCAAGGCT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGGTGCTCCTCAATGTTaGCATGCCGTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGGAPQC*HAVLQP
Trigger: AGGCTGAAGAACGGCATGGCAACATTGAGGAGCACC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGTCCAGCTGCCGCAGGTaGTCCTCAATGTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGSSCRR*SSMLPC
Trigger: GCATGGCAACATTGAGGAGCACCTGCGGCAGCTGGA...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGTGCTGCTCCTCAATCTaGCGCTGGGAGCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEECCSSI*RWELSN
Trigger: GTTGGAGAGCTCCCAGCGGCAGATTGAGGAGCAGCA...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGAACCGCACGTCTGCTaGACTGCCCATGTGCGACCT +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMEPHVC*TAHVRP
Trigger: AGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAATGCACGCCTGGGGGTaGGTGTGTGGTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQMHAWG*VCGCAQ
Trigger: CTGGGCACAACCACACACGCACCCCCAGGCGTGCAT...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGTTAGGGCTTCCATGCTaGCACTGGTTACACGCGTCT +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGLGLPC*HWLHAS
Trigger: AGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAA...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCCACGCTTGCGCAGCTaGTTCAGGTTTAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQPRLRS*FRFRAS
Trigger: GGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGG...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACCTCCAAGGCACTCTTaGCTTCTTCCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPPPRHS*LLPGSG
Trigger: CCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGGGCTGCTGTTGCTGCTaGTGGGGTTGCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWGCCCC*WGCCPD
Trigger: ATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAGCC...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATAGTCCTGGCTGCTGTTaGTGCTGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNSPGCC*CCWGCC
Trigger: GCAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACT...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCGGAGCTTGAGCCGGTaGAGGGCATTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWRSLSR*RALLMP
Trigger: CGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCG...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGCCAGCAAGGCTCCATaGACACCACTCTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEASKAP*TPLSCR
Trigger: CCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGACGAGACTAGGAGCTaGGGAAGGAAGGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQDETRS*GRKGNE
Trigger: CTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGGACGAGACTAGGAGCTaGGGAAGGAAGGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWDETRS*GRKGNE
Trigger: CTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGACATCCACCCTGAGCTaGCCTTCTCTCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQTSTLS*PSLLPP
Trigger: TGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGT...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGAGGGGACATTCCCACTaGCCTTTGGGCTTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGRGHSH*PLGLRL
Trigger: TAGCCTTAAGCCCAAAGGGCAGTGGGAATGTCCCCT...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGCTGGCACTGCCCAGGTaGCATTGCTCCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEELALPR*HCSFWT
Trigger: AGTCCAGAAGGAGCAATGGCACCTGGGCAGTGCCAG...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGGGGTCTGAGCCCAGCTaGCCTCCTCACTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWGSEPS*PPHCLF
Trigger: AAACAGACAGTGAGGAGGGCAGCTGGGCTCAGACCC...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGGGCCACGGAGAGAGCTaGACAAAGGCAAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWGHGES*TKARLP
Trigger: TGGCAACCTTGCCTTTGTCCAGCTCTCTCCGTGGCC...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAAGGTGGCGCTGGAGCTaGTCCCGCTCGTGTATGGCA +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQRWRWS*SRSCMA
Trigger: TGCCATACACGAGCGGGACCAGCTCCAGCGCCACCT...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGGCACCTCCACCTCACTaGAGACCCCCGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWAPPPH*RPPKVT
Trigger: AGTCACCTTCGGGGGTCTCCAGTGAGGTGGAGGTGC...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTCGCTCCCGGGCCTaGCTCAACTCAAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSRSRA*LNSKFC
Trigger: GCAGAACTTTGAGTTGAGCCAGGCCCGGGAGCGACT...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGAGTCGCTCCCGGGCCTaGCTCAACTCAAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWSRSRA*LNSKFC
Trigger: GCAGAACTTTGAGTTGAGCCAGGCCCGGGAGCGACT...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTCCTCAATCTGCCGCTaGGAGCTCTCCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSSICR*ELSNSW
Trigger: CCAGGAGTTGGAGAGCTCCCAGCGGCAGATTGAGGA...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGTCCTCAATCTGCCGCTaGGAGCTCTCCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEESSICR*ELSNSW
Trigger: CCAGGAGTTGGAGAGCTCCCAGCGGCAGATTGAGGA...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCCCTCGGCCCTTCAGCTaGTCCACCTCTTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVPRPFS*STSWRS
Trigger: GCTGCGCCAAGAGGTGGACCAGCTGAAGGGCCGAGG...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACCCTCGGCCCTTCAGCTaGTCCACCTCTTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHPRPFS*STSWRS
Trigger: GCTGCGCCAAGAGGTGGACCAGCTGAAGGGCCGAGG...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGATGTGCGACCTGGAGTaGACGCCATCCACAAACGGC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEMCDLE*TPSTNG
Trigger: GCCGTTTGTGGATGGCGTCCACTCCAGGTCGCACAT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAACTGGGGGTGCGTGTGTaGTTGTGCCCAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQLGVRV*LCPGRT
Trigger: GGTTCTCCCTGGGCACAACCACACACGCACCCCCAG...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGTCTGGGCATCTGAGTaGCCGCTGGGGGAGACAACA +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMVWASE*PLGETT
Trigger: TGTTGTCTCCCCCAGCGGCCACTCAGATGCCCAGAC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAATCATGGCCAGGGTCTaGGCATCTGAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLIMARV*ASEWPL
Trigger: CAGCGGCCACTCAGATGCCCAGACCCTGGCCATGAT...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTCAGAGAGGTGGGGATaGAACCACGCTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSERWG*NHACAA
Trigger: AGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGA...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAGTGGTGGGGACGCGCTaGCCAGGGACAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGVVGTR*PGTGPS
Trigger: TGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCAC...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTATTCGGTCCAGGTCCTaGGCAGCACTGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGIRSRS*AALREV
Trigger: CACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAAT...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACTCTTCCCGAGACACTaGCGACAGCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPLFPRH*RQQLPP
Trigger: AGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATCTAGCCGCAGCGTCCTaGGTGAGGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNLAAAS*VRKEEK
Trigger: CTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAG...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTTGTGCAGGGAGTCCTaGCTGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQLCRES*LLLLLL
Trigger: CAGCAGCAGCAACAGCAGCCAGGACTCCCTGCACAA...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGGCAGAACATGGCCTGTaGCTCCATCCCGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWAEHGL*LHPDSA
Trigger: AGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGC...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCAGAACATGGCCTGTaGCTCCATCCCGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPAEHGL*LHPDSA
Trigger: AGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTCTGTTAGCAGAACATaGCCTGTGGCTCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGSVSRT*PVAPSR
Trigger: TCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGTGGGGCAGAGGGGCTaGTCAATGACACCATCTCCT +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQVGQRG*SMTPSP
Trigger: AGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCAC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGTCCTTGATCTCATGCTaGCTCTCCTCTCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGSLISC*LSSRLF
Trigger: GAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGA...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCAGGGCCAGTGTGTTGTaGTCGAAGTTCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGRASVL*SKFSSR
Trigger: CCTGGACGAGAACTTCGACCACAACACACTGGCCCT...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCCTGGGTGTTCTGTGTaGGGATCTGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEPGCSV*GSGGSG
Trigger: CCCTGATCCTCCAGATCCCCACACAGAACACCCAGG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCATGCCGCCGCGACCGTaGTGCTCCCGCGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSMPPRP*CSRGRK
Trigger: CTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCAT...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACAGCCCTGGGGGCCATaGCTAGTCCCGGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPQPWGP*LVPEGG
Trigger: TCCGCCTTCCGGGACTAGCCATGGCCCCCAGGGCTG...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGTGTGGCCCAGGATCCTaGTCCTGGTGGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWCGPGS*SWWRLQ
Trigger: CTGCAACCTCCACCAGGACCAGGATCCTGGGCCACA...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGGACCATCCCAGCCTGTaGCCCAGGATCCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWDHPSL*PRILVL
Trigger: CAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTC...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGGCTCCACCCGATGGTTaGGGCAGGGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKAPPDG*GRGHSH
Trigger: GTGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGC...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGAGGAGCTCCACCCGATaGTTGGGGCAGGGGACATTC +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMRSSTR*LGQGTF
Trigger: GAATGTCCCCTGCCCCAACCATCGGGTGGAGCTCCT...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGCTGGACTGGGTGCCCTaGCCCATTATCTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQLDWVP*PIISPA
Trigger: TGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAG...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCTGGACTGGGTGCCCTaGCCCATTATCTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPELDWVP*PIISPA
Trigger: TGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGTGCCATTGCTCCTTCTaGACTGGGTGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWCHCSF*TGCPGP
Trigger: TGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCA...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGCCAGCTCACACCCAGTaGGCCCAAAGAGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWPAHTQ*AQRVKG
Trigger: TCCCTTGACTCTTTGGGCCCACTGGGTGTGAGCTGG...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGGCAGTGCCAGGCGAGTaGACAGGTGGGCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRAVPGE*TGGQGL
Trigger: AAGCCCCTGCCCACCTGTCCACTCGCCTGGCACTGC...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCAAGGCAGGGCCAGCTTaGCAGACTCTTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGKAGPA*QTLPSM
Trigger: CATTGAGGGAAGAGTCTGCCAAGCTGGCCCTGCCTT...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447715.6
CDS-3UTR TCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCGGCGGTCCCCCTCATTaGTTGTGGGCATCACCTCAC +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGGGPPH*LWASPH
Trigger: GTGAGGTGATGCCCACAATCAATGAGGGGGACCGCC...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGGGCGGTCCCCCTCATTaGTTGTGGGCATCACCTCAC +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWGGPPH*LWASPH
Trigger: GTGAGGTGATGCCCACAATCAATGAGGGGGACCGCC...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGTTCTTCAGCCTTGGTaGGGGCTGCAATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEVLQPW*GLQFSG
Trigger: CCCAGAGAATTGCAGCCCTCACCAAGGCTGAAGAAC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR TCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCACACTGGGCAGGGTCATaGCCCCCATTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPHWAGS*PPFGPG
Trigger: ACCTGGACCGAATGGGGGTCATGACCCTGCCCAGTG...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACCGCAGCGTCCTGGGTaGGGAAGGAGGAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLPQRPG*GRRRSL
Trigger: GAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGG...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCCCGCAGCGTCCTGGGTaGGGAAGGAGGAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSPQRPG*GRRRSL
Trigger: GAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGG...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAAATGACACCATCTCCTaGATGGCCAGGCGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPNDTIS*MARRSL
Trigger: CAAGCTCCGCCTGGCCATTCAGGAGATGGTGTCATT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAATGACACCATCTCCTaGATGGCCAGGCGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQNDTIS*MARRSL
Trigger: CAAGCTCCGCCTGGCCATTCAGGAGATGGTGTCATT...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAAGAGGGGCTGGTCAATaGCACCATCTCCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPRGAGQ*HHLLNG
Trigger: GCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGCCTCTTCAGACACATaGTGCCATACTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGASSDT*CHTEDW
Trigger: CCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGGGGTTGGGAGAGTGGTaGTGCTGGGGATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWGLGEW*CWGCQN
Trigger: GTTTTGGCATCCCCAGCATCACCACTCTCCCAACCC...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGGGTTGGGAGAGTGGTaGTGCTGGGGATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMGLGEW*CWGCQN
Trigger: GTTTTGGCATCCCCAGCATCACCACTCTCCCAACCC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAACAGGCCCTGAGGACTaGGACCCCCAGCTCACACCC +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSTGPED*DPQLTP
Trigger: GGGTGTGAGCTGGGGGTCTCAGTCCTCAGGGCCTGT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR TCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGTGCGACCTTGAGCGGTaGTGGGGGAGAGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQCDLER*WGREKT
Trigger: TGTCTTTTCTCTCCCCCATCACCGCTCAAGGTCGCA...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272198.10
CDS-3UTR TCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATAAGCCGAATGTGGCCATaGCAGGCAGGGACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKISRMWP*QAGTAG
Trigger: CCCTGCTGTCCCTGCCTGTCATGGCCACATTCGGCT...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR TCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGACTCCTTCTCTTCCTaGATCATCTCCGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPDSFSS*IISGTG
Trigger: GCCAGTGCCGGAGATGATTCAGGAAGAGAAGGAGTC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447715.6
CDS-3UTR GCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGTCCCGCTCTAGAAGCTaGTCCCGACACATGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWSRSRS*SRHMLS
Trigger: GCTGAGCATGTGTCGGGAGCAGCTTCTAGAGCGGGA...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCGTCTGCTGCAGCTTCTaGTCTGCCACCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGVCCSF*SATSSS
Trigger: GCTGCTGGAGGTGGCAGAGCAGAAGCTGCAGCAGAC...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTCCTCAATGTTGCCATaGCGTTCTTCAGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGSSMLP*RSSALV
Trigger: CACCAAGGCTGAAGAACGGCATGGCAACATTGAGGA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGGTGCTCCTCAATGTTaGCATGCCGTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGGAPQC*HAVLQP
Trigger: AGGCTGAAGAACGGCATGGCAACATTGAGGAGCACC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACCGGCCCTTGTGGTGGTaGTGCTCCTCAATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHRPLWW*CSSICR
Trigger: GCGGCAGATTGAGGAGCAGCACCACCACAAGGGCCG...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTGCACGTCTGCTGCACTaGCCATGTGCGACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGARLLH*PCATWS
Trigger: ACTCCAGGTCGCACATGGGCAGTGCAGCAGACGTGC...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGGTGCGTGTGTGGTTGTaGCCAGGGAGAACCGCACGT +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKVRVWL*PGRTAR
Trigger: ACGTGCGGTTCTCCCTGGGCACAACCACACACGCAC...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGGTGCGTGTGTGGTTGTaGCCAGGGAGAACCGCACGT +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWVRVWL*PGRTAR
Trigger: ACGTGCGGTTCTCCCTGGGCACAACCACACACGCAC...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGCCTCCAAGGCACTCTTaGCTTCTTCCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMPPRHS*LLPGSG
Trigger: CCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGG...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGGGCTGCTGTTGCTGCTaGTGGGGTTGCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWGCCCC*WGCCPD
Trigger: ATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAGCC...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAACGGAGCTTGAGCCGGTaGAGGGCATTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQRSLSR*RALLMP
Trigger: CGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCG...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCCGGAGCTTGAGCCGGTaGAGGGCATTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSRSLSR*RALLMP
Trigger: CGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCG...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGCTCATGCAGGTTTCCTaGGTAGTCCCGGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWLMQVS*VVPEPN
Trigger: ATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAG...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTCATGCAGGTTTCCTaGGTAGTCCCGGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGLMQVS*VVPEPN
Trigger: ATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAG...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGCCAGCAAGGCTCCATaGACACCACTCTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMASKAP*TPLSCR
Trigger: CCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCTTCCGGTCTGTaGCCAAGGCCAACAGGTTAT +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGPASGL*PRPTGY
Trigger: ATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGG...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGACGAGACTAGGAGCTaGGGAAGGAAGGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMDETRS*GRKGNE
Trigger: CTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGATGCCAAAACCAGCTaGCAGACCATTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGDAKTS*QTIWHS
Trigger: GCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCTGCCCAGGTGCCATTaGTCCTTCTGGACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKLPRCH*SFWTGC
Trigger: GCACCCAGTCCAGAAGGAGCAATGGCACCTGGGCAG...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGCTGCCCAGGTGCCATTaGTCCTTCTGGACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGLPRCH*SFWTGC
Trigger: GCACCCAGTCCAGAAGGAGCAATGGCACCTGGGCAG...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGGCAGGTGGCTGCCTTaGCCAAGCCTAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSGRWLP*PSLRES
Trigger: GCTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGTCCTGGCACAGCTGCTaGCTTACGACATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWSWHSC*LTTWPT
Trigger: TGTTGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGA...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATCCAGGGGAACCCAGTaGATGGGTCTCAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQSRGTQ*MGLRVG
Trigger: GCCCACTCTGAGACCCATGCACTGGGTTCCCCTGGA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGGCAGATGGCAGGCCTaGCCACGGAGAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPGRWQA*PRRELD
Trigger: GTCCAGCTCTCTCCGTGGCCAGGCCTGCCATCTGCC...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACCACAGGGTTGGCACCTaGACCCCCTCCCCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNHRVGT*TPSPEY
Trigger: GTACTCTGGGGAGGGGGTCCAGGTGCCAACCCTGTG...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATCGTGTATGGCATCCTaGAGCCGGCTCTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQSCMAS*SRLCVA
Trigger: GGCCACACAGAGCCGGCTCCAGGATGCCATACACGA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTAAGGTGGCGCTGGAGCTaGTCCCGCTCGTGTATGGCA +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLRWRWS*SRSCMA
Trigger: TGCCATACACGAGCGGGACCAGCTCCAGCGCCACCT...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAAGGTGGCAAATTCCTaGGGGAGGGCGGAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEKVANS*GRAELR
Trigger: CCTTAACTCCGCCCTCCCCCAGGAATTTGCCACCTT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAACCCCCGAAGGTGACTaGGCCTGGCGCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQTPEGD*AWRFTT
Trigger: TGTGGTGAAGCGCCAGGCCCAGTCACCTTCGGGGGT...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACCCCCGAAGGTGACTaGGCCTGGCGCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRTPEGD*AWRFTT
Trigger: TGTGGTGAAGCGCCAGGCCCAGTCACCTTCGGGGGT...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAGCAGACACCTGCTGGTaGGCACCTGCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEADTCW*APASCS
Trigger: GGAGCAGCTGGCAGGTGCCCACCAGCAGGTGTCTGC...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGCAGGGACTCCTTGTTaGCCAGCTCATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEAGTPC*PAHSPA
Trigger: AGCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCTCAATCTGCCGCTaGGAGCTCTCCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLSSICR*ELSNSW
Trigger: CCAGGAGTTGGAGAGCTCCCAGCGGCAGATTGAGGA...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCCTGGGGGTGCGTGTGTaGTTGTGCCCAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSLGVRV*LCPGRT
Trigger: GGTTCTCCCTGGGCACAACCACACACGCACCCCCAG...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACACTGGGGGTGCGTGTGTaGTTGTGCCCAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTLGVRV*LCPGRT
Trigger: GGTTCTCCCTGGGCACAACCACACACGCACCCCCAG...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGGCCCACCAGACCCCCTaGCTCATCCTCATCCACGTC +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRAHQTP*LILIHV
Trigger: GACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGC...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGATCATGGCCAGGGTCTaGGCATCTGAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKIMARV*ASEWPL
Trigger: CAGCGGCCACTCAGATGCCCAGACCCTGGCCATGAT...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCAGAGAGGTGGGGATaGAACCACGCTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLSERWG*NHACAA
Trigger: AGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGA...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACGGGCCGTCAGAGAGGTaGGGATGGAACCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNGPSER*GWNHAC
Trigger: GCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCC...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCGTGGTGGGGACGCGCTaGCCAGGGACAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSVVGTR*PGTGPS
Trigger: TGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCAC...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGCGGCCGCTGAGTGGTaGGGACGCGCTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSAAAEW*GRAGQG
Trigger: TCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTGCGGCCGCTGAGTGGTaGGGACGCGCTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLAAAEW*GRAGQG
Trigger: TCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGC...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATTCGGTCCAGGTCCTaGGCAGCACTGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHIRSRS*AALREV
Trigger: CACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAAT...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGATTCGGTCCAGGTCCTaGGCAGCACTGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRIRSRS*AALREV
Trigger: CACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAAT...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATCTCTTCCCGAGACACTaGCGACAGCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNLFPRH*RQQLPP
Trigger: AGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAG...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGTTGTGCAGGGAGTCCTaGCTGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWLCRES*LLLLLL
Trigger: CAGCAGCAGCAACAGCAGCCAGGACTCCCTGCACAA...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAGTGGGGCAGAGGGGCTaGTCAATGACACCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLVGQRG*SMTPSP
Trigger: AGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCAC...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGTCTCTTTCCATCACTTaGCGTGCCTGGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGSLSIT*RAWVFC
Trigger: ACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGA...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATATGCCGCCGCGACCGTaGTGCTCCCGCGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNMPPRP*CSRGRK
Trigger: CTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCAT...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGGCATGATCTTCTTTaGCGGGGCCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVRHDLL*RGRWGL
Trigger: CAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCT...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGCCAGAATCCCAAGCATaGACAACCTGGGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGPESQA*TTWVPP
Trigger: TGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGG...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGCCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGPEEEG*LHIHPE
Trigger: CTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGG...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWGSWSW*RLQCRP
Trigger: TGGTCTGCACTGCAACCTCCACCAGGACCAGGATCC...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCCTCACCATCCTGTaGGAGAATGGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSLTIL*ENGAFS
Trigger: ACTGAAGGCCCCATTCTCCCACAGGATGGTGAGGCT...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGAGCCTCACCATCCTGTaGGAGAATGGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPESLTIL*ENGAFS
Trigger: ACTGAAGGCCCCATTCTCCCACAGGATGGTGAGGCT...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGCATTGGCTCTCCCTCTaGCTGGTCTGCCTATGCTTC +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGHWLSL*LVCLCF
Trigger: GAAGCATAGGCAGACCAGCCAGAGGGAGAGCCAATG...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTAGGAGCTCCACCCGATaGTTGGGGCAGGGGACATTC +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGRSSTR*LGQGTF
Trigger: GAATGTCCCCTGCCCCAACCATCGGGTGGAGCTCCT...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGCAGCCACCTGTAGGATaGCACTGCACTGGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMQPPVG*HCTGPY
Trigger: ATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTG...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGGCCGCCAAGGTCTCCTaGCTCTCCCGAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTAAKVS*LSRRDS
Trigger: GGAGTCTCTTCGGGAGAGTCAGGAGACCTTGGCGGC...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACACACAGTCATCCGCAGTaGCCGTTCATGGCGGGACAC +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTHSHPQ*PFMAGH
Trigger: GTGTCCCGCCATGAACGGTCACTGCGGATGACTGTG...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGCACAGTCATCCGCAGTaGCCGTTCATGGCGGGACAC +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRHSHPQ*PFMAGH
Trigger: GTGTCCCGCCATGAACGGTCACTGCGGATGACTGTG...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGTTGTTGTTAGGGTaGCCAGTCGCTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSRLLLG*PVAPGP
Trigger: AGGCCCGGGAGCGACTGGTCACCCTAACAACAACCG...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGCGGTTGTTGTTAGGGTaGCCAGTCGCTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMRLLLG*PVAPGP
Trigger: AGGCCCGGGAGCGACTGGTCACCCTAACAACAACCG...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAACCGCAGCGTCCTGGGTaGGGAAGGAGGAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEPQRPG*GRRRSL
Trigger: GAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGG...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGGCCAATGGACGACTTaGTGCCCTTGCGCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPGQWTT*CPCAWR
Trigger: GCGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCC...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGGTGCAGGGCATTGCTaGTGCCGATCTCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMGAGHC*CRSPAG
Trigger: TCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCCATCTCTTCATGGGTaGCCCAGACATTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQPSLHG*PRHSQK
Trigger: CTTCTGGGAATGTCTGGGTCACCCATGAAGAGATGG...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCGCCTCTTCAGACACATaGTGCCATACTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGASSDT*CHTEDW
Trigger: CCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGAGACTAACACATCCTTaGTCTCATGCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGRLTHP*SHAGSP
Trigger: AGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCT...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGATAGACTGGACCCAATaGACCACCTGGTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEIDWTQ*TTWSLV
Trigger: GACCAACGACCAGGTGGTTCATTGGGTCCAGTCTAT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATAGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGCCATCAAGAGCACCCTaGAGGAGTCAGATGGCTATG +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGPSRAP*RSQMAM
Trigger: CATAGCCATCTGACTCCTTCAGGGTGCTCTTGATGG...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGGGGAGAGGCTGGGACTaGGTCTCCCTTACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTGRGWD*VSLTAS
Trigger: GCTGGCTGTAAGGGAGACTCAGTCCCAGCCTCTCCC...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGCCATACACCCATTCCTaGTGCACTGAGCAAATACAG +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGPYTHS*CTEQIQ
Trigger: CTGTATTTGCTCAGTGCATCAGGAATGGGTGTATGG...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCATCCTCACACTGGCGGTaGAGGGACTCCTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPSSHWR*RDSLLA
Trigger: GGCCAACAAGGAGTCCCTGCACCGCCAGTGTGAGGA...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTAGCCTTGGTGAGGGCTaGAATTCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGSLGEG*NSLGQL
Trigger: GAGCTGGCCCAGAGAATTGCAGCCCTCACCAAGGCT...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTCCTCAATGTTGCCATaGCGTTCTTCAGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGSSMLP*RSSALV
Trigger: CACCAAGGCTGAAGAACGGCATGGCAACATTGAGGA...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR GCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAACCCTTGTGGTGGTGCTaGTCCTCAATCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQPLWWC*SSICRW
Trigger: CCAGCGGCAGATTGAGGAGCAGCACCACCACAAGGG...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCGGCCCTTGTGGTGGTaGTGCTCCTCAATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNRPLWW*CSSICR
Trigger: GCGGCAGATTGAGGAGCAGCACCACCACAAGGGCCG...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGGAGAACCGCACGTCTaGTGCACTGCCCATGTGCGA +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSGEPHV*CTAHVR
Trigger: TCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAATGCACGCCTGGGGGTaGGTGTGTGGTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEMHAWG*VCGCAQ
Trigger: CTGGGCACAACCACACACGCACCCCCAGGCGTGCAT...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATAGACTCTTCCCTCAATaGCGAGTAGCGGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNRLFPQ*RVAAMH
Trigger: GTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCT...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGGGTTTAGGGCTTCCATaGTGCCACTGGTTACACGCG +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWGLGLP*CHWLHA
Trigger: CGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACC...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCACGCTTGCGCAGCTaGTTCAGGTTTAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKPRLRS*FRFRAS
Trigger: GGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGG...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGGATGGAACCACGCTTaGGCAGCTGCTTCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGGWNHA*AAASGL
Trigger: TAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCGGCTGCTGTTGCTGCTaGTGGGGTTGCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVGCCCC*WGCCPD
Trigger: ATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAGCC...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAAGTCCTGGCTGCTGTTaGTGCTGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTSPGCC*CCWGCC
Trigger: GCAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACT...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAAGGGCATTCCTTTCCTaGGGGCATCTTCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPRAFLS*GHLQAA
Trigger: AGCTGCTTGAAGATGCCCGCAGGAAAGGAATGCCCT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACGGAGCTTGAGCCGGTaGAGGGCATTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPRSLSR*RALLMP
Trigger: CGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCG...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGACATCCTTGATCTCATaGTGGCTCTCCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEETSLIS*WLSSRL
Trigger: GAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAGACGAGACTAGGAGCTaGGGAAGGAAGGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQDETRS*GRKGNE
Trigger: CTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAACATCCACCCTGAGCTaGCCTTCTCTCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQTSTLS*PSLLPP
Trigger: TGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGT...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGATGCCAAAACCAGCTaGCAGACCATTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGDAKTS*QTIWHS
Trigger: GCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATAATGGGGGCAGGAACTaGAGTCACGGTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNNGGRN*SHGDGL
Trigger: CAACCCATCACCGTGACTGCAGTTCCTGCCCCCATT...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGAATGGGGGCAGGAACTaGAGTCACGGTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMNGGRN*SHGDGL
Trigger: CAACCCATCACCGTGACTGCAGTTCCTGCCCCCATT...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAAGGGGACATTCCCACTaGCCTTTGGGCTTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPRGHSH*PLGLRL
Trigger: TAGCCTTAAGCCCAAAGGGCAGTGGGAATGTCCCCT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGAAGGAGGCCTTAGTCTaGCTTTTCCCCAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGKEALV*LFPKLD
Trigger: GTCAAGTTTGGGGAAAAGGCAGACTAAGGCCTCCTT...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCCCATTATCTCACCTaGAAGCCTAGTCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPAHYLT*KPSPCS
Trigger: TGAGCAGGGACTAGGCTTGCAGGTGAGATAATGGGC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGCCCATTATCTCACCTaGAAGCCTAGTCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEAHYLT*KPSPCS
Trigger: TGAGCAGGGACTAGGCTTGCAGGTGAGATAATGGGC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGCTATCCTGGCACAGCTaGTGCCTTACGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMLSWHS*CLTTWP
Trigger: TGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGATAG...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGCCAGGCATACCCCTATaGCTAGGAAGCTTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWPGIPL*LGSFRR
Trigger: CCTCCTAAAGCTTCCTAGGCATAGGGGTATGCCTGG...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272198.10
CDS-3UTR GCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGTGTGGTACTCTAAGTTaGAGCAGACCCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQCGTLS*SRPPGS
Trigger: TGAGCCAGGGGGTCTGCTGCAACTTAGAGTACCACA...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACACACATGGTGGGGGTTaGCAGGGCCTTCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNTHGGG*QGLLSV
Trigger: GACGCTGAGAAGGCCCTGCCAACCCCCACCATGTGT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTCAGCTGCTCGAAGTTaGCGTCAGCATCGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGSAARS*RQHRRH
Trigger: ATGGCGCCGATGCTGACGCCAACTTCGAGCAGCTGA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCTCGTGTATGGCATCCTaGAGCCGGCTCTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSSCMAS*SRLCVA
Trigger: GGCCACACAGAGCCGGCTCCAGGATGCCATACACGA...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGGTCCCGCTCGTGTATaGCATCCTGGAGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMGPARV*HPGAGS
Trigger: AGAGCCGGCTCCAGGATGCCATACACGAGCGGGACC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGCTCCCGGGTTAAGGTaGCAAATTCCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPAPGLR*QIPGGG
Trigger: CCCTCCCCCAGGAATTTGCCACCTTAACCCGGGAGC...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGCACCTCCACCTCACTaGAGACCCCCGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPAPPPH*RPPKVT
Trigger: AGTCACCTTCGGGGGTCTCCAGTGAGGTGGAGGTGC...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGCCTTCTCCTCACACTaGCGGTGCAGGGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSAFSSH*RCRDSL
Trigger: CAAGGAGTCCCTGCACCGCCAGTGTGAGGAGAAGGC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAGCGGCGATGCACGCCTaGGGGTGCGTGTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGAAMHA*GCVCGC
Trigger: ACAACCACACACGCACCCCCAGGCGTGCATCGCCGC...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGGCCCACCAGACCCCCTaGCTCATCCTCATCCACGTC +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTAHQTP*LILIHV
Trigger: GACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGC...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACACATCTGAGTGGCCGCTaGGGGAGACAACATCCGCAG +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTHLSGR*GRQHPQ
Trigger: CTGCGGATGTTGTCTCCCCCAGCGGCCACTCAGATG...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGGTCTGGGCATCTGAGTaGCCGCTGGGGGAGACAACA +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRVWASE*PLGETT
Trigger: TGTTGTCTCCCCCAGCGGCCACTCAGATGCCCAGAC...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAGTCTGGGCATCTGAGTaGCCGCTGGGGGAGACAACA +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTVWASE*PLGETT
Trigger: TGTTGTCTCCCCCAGCGGCCACTCAGATGCCCAGAC...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACCCGCGCGGAGCTCCGTaGACTCCTTCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNPRGAP*TPSLPE
Trigger: TTCAGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGG...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTCAGAGAGGTGGGGATaGAACCACGCTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGSERWG*NHACAA
Trigger: AGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAATTCGGTCCAGGTCCTaGGCAGCACTGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPIRSRS*AALREV
Trigger: CACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAAT...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCACTAGCCGCAGCGTCCTaGGTGAGGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPLAAAS*VRKEEK
Trigger: CTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAG...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGGCAGAACATGGCCTGTaGCTCCATCCCGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGAEHGL*LHPDSA
Trigger: AGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGC...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGCATCTTCAAGCAGCTaGTGTTTCTTCTTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGASSSS*CFFFSR
Trigger: GCGGCTAAAGAAGAAACACCAGCTGCTTGAAGATGC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGTAGGACCATCCCACTaGGCAAAGGGCATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQVGPSH*AKGIPF
Trigger: GAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTAC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTAGGACCATCCCACTaGGCAAAGGGCATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPVGPSH*AKGIPF
Trigger: GAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTAC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGTCCTTGATCTCATGCTaGCTCTCCTCTCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEESLISC*LSSRLF
Trigger: GAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGA...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATATCACTTGGCGTGCCTaGGTGTTCTGTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNITWRA*VFCVGI
Trigger: GATCCCCACACAGAACACCCAGGCACGCCAAGTGAT...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTCTCTTTCCATCACTTaGCGTGCCTGGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGSLSIT*RAWVFC
Trigger: ACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGA...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAGGAGGAAGCCAGCCCTaGGGGCCATGGCTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQGGSQP*GPWLVP
Trigger: CGGGACTAGCCATGGCCCCCAGGGCTGGCTTCCTCC...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCAAGCATGGACAACCTaGGTGCCTCCACAATACCAG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGQAWTT*VPPQYQ
Trigger: CTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTACCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLPEEEG*LHIHPE
Trigger: CTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGG...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAATGTGGCCCAGGATCCTaGTCCTGGTGGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQCGPGS*SWWRLQ
Trigger: CTGCAACCTCCACCAGGACCAGGATCCTGGGCCACA...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGGGCTCTCCCTCTGGCTaGTCTGCCTATGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQGSPSG*SAYASY
Trigger: ATAAGAAGCATAGGCAGACCAGCCAGAGGGAGAGCC...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACGCTCCACCCGATGGTTaGGGCAGGGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNAPPDG*GRGHSH
Trigger: GTGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGC...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGGAGCTCCACCCGATaGTTGGGGCAGGGGACATTC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSRSSTR*LGQGTF
Trigger: GAATGTCCCCTGCCCCAACCATCGGGTGGAGCTCCT...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCTGTATCCCTCAGCTTaGGTTCCCATCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPELYPSA*VPIMLL
Trigger: CAGCAGCATGATGGGAACCCAAGCTGAGGGATACAG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCCTGGACTGGGTGCCCTaGCCCATTATCTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGLDWVP*PIISPA
Trigger: TGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAG...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGTGCCATTGCTCCTTCTaGACTGGGTGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRCHCSF*TGCPGP
Trigger: TGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCA...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTCAAGGTGCTCTGAATaGACCCAGCTATCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSRCSE*TQLSWH
Trigger: GTGCCAGGATAGCTGGGTCCATTCAGAGCACCTTGA...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACTACAGGAGGCTGGTGTaGAGGGCTCGGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNYRRLV*RARVTG
Trigger: ACCAGTGACCCGAGCCCTCCACACCAGCCTCCTGTA...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGGGACTCACAGGGTTaGCACCTCCAGGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSRDSQG*HLQGNP
Trigger: TGGGTTCCCCTGGAGGTGCCAACCCTGTGAGTCCCT...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTTGCAGCAGACCCCCTaGCTCATCCTCATCCACGTC +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGLQQTP*LILIHV
Trigger: GACGTGGATGAGGATGAGCCAGGGGGTCTGCTGCAA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447715.6
CDS-3UTR TCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAGTGGTGCTCAAACAGTaGCTTGAGGGCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQVVLKQ*LEGLQH
Trigger: GTGCTGAAGGCCCTCAAGTCACTGTTTGAGCACCAC...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTGCTCCTCCAAGGTGGTaGCTCGCTCCAGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLAPPRW*LAPALP
Trigger: GGGCAGCGCTGGAGCGAGTCACCACCTTGGAGGAGC...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGCTCCTCCAAGGTGGTaGCTCGCTCCAGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNAPPRW*LAPALP
Trigger: GGGCAGCGCTGGAGCGAGTCACCACCTTGGAGGAGC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCAGGGTCTGGGCATCTaGGTGGCCGCTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAQGLGI*VAAGGD
Trigger: GTCTCCCCCAGCGGCCACTCAGATGCCCAGACCCTG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR TCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAAATGACACCATCTCCTaGATGGCCAGGCGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQNDTIS*MARRSL
Trigger: CAAGCTCCGCCTGGCCATTCAGGAGATGGTGTCATT...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCCTCTTCAGACACATaGTGCCATACTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPASSDT*CHTEDW
Trigger: CCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAGGGCTGCGTCTGAAATaGCCCTTTCTTGGAAGGACC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQGLRLK*PFLGRT
Trigger: GGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCC...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGGGTTGGGAGAGTGGTaGTGCTGGGGATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQGLGEW*CWGCQN
Trigger: GTTTTGGCATCCCCAGCATCACCACTCTCCCAACCC...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNPGPGT*ITVGEA
Trigger: AGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGG...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGTGGATGAGGGTTAGGTaGTTTGGGGACAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGWMRVR*FGDKQE
Trigger: CTCTTGCTTGTCCCCAAATCACCTAACCCTCATCCA...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGTGGATGAGGGTTAGGTaGTTTGGGGACAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQWMRVR*FGDKQE
Trigger: CTCTTGCTTGTCCCCAAATCACCTAACCCTCATCCA...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACAAAATAGCCCTGGATaGGGGTTAGGTGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPQNSPG*GLGDLG
Trigger: CCCCAAATCACCTAACCCTCATCCAGGGCTATTTTG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGCCACTCCCAGCAACCTaGTGGCAGGGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRPLPAT*WQGGQG
Trigger: TCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGG...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGCTTCTCAAGGTGCTCTaGATGGACCCAGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWLLKVL*MDPAIL
Trigger: CAGGATAGCTGGGTCCATTCAGAGCACCTTGAGAAG...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATCTTCTCAAGGTGCTCTaGATGGACCCAGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNLLKVL*MDPAIL
Trigger: CAGGATAGCTGGGTCCATTCAGAGCACCTTGAGAAG...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTAATTTGCAAGGGGCTTTaGCGGGGAGGAGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLICKGL*RGGVWA
Trigger: TGCCCACACTCCTCCCCGGCAAAGCCCCTTGCAAAT...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAACCCAAAGCAAGCATTTaGAAGGGGCTTTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQPKASI*KGLCRG
Trigger: TCCCCGGCAAAGCCCCTTGCAAATGCTTGCTTTGGG...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACATCCCGCTCTAGAAGCTaGTCCCGACACATGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTSRSRS*SRHMLS
Trigger: GCTGAGCATGTGTCGGGAGCAGCTTCTAGAGCGGGA...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTGGTCCCGCTGATGCTTaGTGCTCAGCTCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSGPADA*CSAPPT
Trigger: AGTCGGAGGAGCTGAGCAGCAAGCATCAGCGGGACC...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGTCTGCTGCAGCTTCTaGTCTGCCACCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMVCCSF*SATSSS
Trigger: GCTGCTGGAGGTGGCAGAGCAGAAGCTGCAGCAGAC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGCCTTGCGCATCGTCTaGTGCAGCTTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPALRIV*CSFCSA
Trigger: GGCAGAGCAGAAGCTGCAGCAGACGATGCGCAAGGC...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCTCTGGCAGCGTCTCTaGCTTGCGCATCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNLWQRL*LAHRLL
Trigger: CAGCAGACGATGCGCAAGGCAGAGACGCTGCCAGAG...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACAGCCTTGGTGAGGGCTaGAATTCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHSLGEG*NSLGQL
Trigger: GAGCTGGCCCAGAGAATTGCAGCCCTCACCAAGGCT...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTAAGCCTTGGTGAGGGCTaGAATTCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLSLGEG*NSLGQL
Trigger: GAGCTGGCCCAGAGAATTGCAGCCCTCACCAAGGCT...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATATCCAGCTGCCGCAGGTaGTCCTCAATGTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKISSCRR*SSMLPC
Trigger: GCATGGCAACATTGAGGAGCACCTGCGGCAGCTGGA...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCTGCTGCTCCTCAATCTaGCGCTGGGAGCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVCCSSI*RWELSN
Trigger: GTTGGAGAGCTCCCAGCGGCAGATTGAGGAGCAGCA...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGGAACCGCACGTCTGCTaGACTGCCCATGTGCGACCT +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTEPHVC*TAHVRP
Trigger: AGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTC...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGGAGAACCGCACGTCTaGTGCACTGCCCATGTGCGA +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMGEPHV*CTAHVR
Trigger: TCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGTGCGTGTGTGGTTGTaGCCAGGGAGAACCGCACGT +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMVRVWL*PGRTAR
Trigger: ACGTGCGGTTCTCCCTGGGCACAACCACACACGCAC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCCCACGCTTGCGCAGCTaGTTCAGGTTTAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGIPRLRS*FRFRAS
Trigger: GGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGG...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAACCACGCTTGCGCAGCTaGTTCAGGTTTAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQPRLRS*FRFRAS
Trigger: GGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGG...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACCTCCAAGGCACTCTTaGCTTCTTCCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLPPRHS*LLPGSG
Trigger: CCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGG...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCCCTCCAAGGCACTCTTaGCTTCTTCCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVPPRHS*LLPGSG
Trigger: CCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGG...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCCCTCCAAGGCACTCTTaGCTTCTTCCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSPPRHS*LLPGSG
Trigger: CCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGG...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAAGTCCTGGCTGCTGTTaGTGCTGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSSPGCC*CCWGCC
Trigger: GCAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGGCACCATAGGCTCCTaGATACTGAATTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGGTIGS*ILNSES
Trigger: AGACTCCGAATTCAGTATGCAGGAGCCTATGGTGCC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGGCACCATAGGCTCCTaGATACTGAATTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEGTIGS*ILNSES
Trigger: AGACTCCGAATTCAGTATGCAGGAGCCTATGGTGCC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGACATCCTTGATCTCATaGTGGCTCTCCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMTSLIS*WLSSRL
Trigger: GAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGT...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTAGCCAGCAAGGCTCCATaGACACCACTCTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLASKAP*TPLSCR
Trigger: CCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGC...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGCCAGCTTCCGGTCTGTaGCCAAGGCCAACAGGTTAT +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGPASGL*PRPTGY
Trigger: ATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGG...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGCATGGACAACCTGGGTaGCTCCACAATACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEHGQPG*LHNTRK
Trigger: TTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATG...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAACATCCACCCTGAGCTaGCCTTCTCTCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQTSTLS*PSLLPP
Trigger: TGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGT...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACACATCCACCCTGAGCTaGCCTTCTCTCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNTSTLS*PSLLPP
Trigger: TGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGTGGCTGGTCTGCCTATaGTTCTTATTAGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGWLVCL*FLLGGS
Trigger: GCTCCCACCTAATAAGAAGCATAGGCAGACCAGCCA...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGTGGCTGGTCTGCCTATaGTTCTTATTAGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWWLVCL*FLLGGS
Trigger: GCTCCCACCTAATAAGAAGCATAGGCAGACCAGCCA...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCCCTGTAGGATGGCACTaGACTGGCCCCTATCCAAGA +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGPVGWH*TGPYPR
Trigger: TCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGG...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACTGCCCAGGTGCCATTaGTCCTTCTGGACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPLPRCH*SFWTGC
Trigger: GCACCCAGTCCAGAAGGAGCAATGGCACCTGGGCAG...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCCTGGCACTGCCCAGGTaGCATTGCTCCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGILALPR*HCSFWT
Trigger: AGTCCAGAAGGAGCAATGGCACCTGGGCAGTGCCAG...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACGCACGTCTGCTGCACTaGCCATGTGCGACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNARLLH*PCATLS
Trigger: GCTCAAGGTCGCACATGGGCAGTGCAGCAGACGTGC...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCAGGGACTCACAGGGTTaGCACCTGGACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSRDSQG*HLDPLP
Trigger: GGGGAGGGGGTCCAGGTGCCAACCCTGTGAGTCCCT...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCATCAGCTGCTCGAAGTTaGCGTCAGCATCGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPSAARS*RQHRRH
Trigger: ATGGCGCCGATGCTGACGCCAACTTCGAGCAGCTGA...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGGAGCCGGCTCTGTGTaGCCGCCAAGGTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHGAGSV*PPRSPD
Trigger: GTCAGGAGACCTTGGCGGCCACACAGAGCCGGCTCC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTGAGTTAAGGTGGCGCTaGAGCTGGTCCCGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSELRWR*SWSRSC
Trigger: ACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTC...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAAGGGCGGAGTTAAGGTaGCGCTGGAGCTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQRAELR*RWSWSR
Trigger: GCGGGACCAGCTCCAGCGCCACCTTAACTCCGCCCT...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGAGGGCGGAGTTAAGGTaGCGCTGGAGCTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: KQESGCLHQHWISWTWDMRAELR*RWSWSR
Trigger: GCGGGACCAGCTCCAGCGCCACCTTAACTCCGCCCT...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGAAGGTGGCAAATTCCTaGGGGAGGGCGGAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWKVANS*GRAELR
Trigger: CCTTAACTCCGCCCTCCCCCAGGAATTTGCCACCTT...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGCTCCCGGGTTAAGGTaGCAAATTCCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPAPGLR*QIPGGG
Trigger: CCCTCCCCCAGGAATTTGCCACCTTAACCCGGGAGC...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGGCAGACACCTGCTGGTaGGCACCTGCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRADTCW*APASCS
Trigger: GGAGCAGCTGGCAGGTGCCCACCAGCAGGTGTCTGC...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCGCAGGGACTCCTTGTTaGCCAGCTCATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGAGTPC*PAHSPA
Trigger: AGCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGC...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGGCAGGGACTCCTTGTTaGCCAGCTCATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKAGTPC*PAHSPA
Trigger: AGCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGC...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGAGCTCTCCAACTCCTaGATCAACGTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEELSNS*INVFFS
Trigger: GGAGAAGAACACGTTGATCCAGGAGTTGGAGAGCTC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGGCGGCCCTTGTGGTaGTGCTGCTCCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTRRPLW*CCSSIC
Trigger: GCAGATTGAGGAGCAGCACCACCACAAGGGCCGCCT...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACGACAGGCGGCCCTTGTaGTGGTGCTGCTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNDRRPL*WCCSSI
Trigger: GATTGAGGAGCAGCACCACCACAAGGGCCGCCTGTC...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACATGTGCGACCTGGAGTaGACGCCATCCACAAACGGC +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNMCDLE*TPSTNG
Trigger: GCCGTTTGTGGATGGCGTCCACTCCAGGTCGCACAT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAAGTCTCCCAGTCCTTaGCAGACTCTTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQKSPSP*QTLPSM
Trigger: CATTGAGGGAAGAGTCTGCCAAGGACTGGGAGACTT...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGAAGTCTCCCAGTCCTTaGCAGACTCTTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGKSPSP*QTLPSM
Trigger: CATTGAGGGAAGAGTCTGCCAAGGACTGGGAGACTT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGCATCTGAGTGGCCGCTaGGGGAGACAACATCCGCAG +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMHLSGR*GRQHPQ
Trigger: CTGCGGATGTTGTCTCCCCCAGCGGCCACTCAGATG...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
CDS-3UTR CCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCCGCGCGGAGCTCCGTaGACTCCTTCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSPRGAP*TPSLPE
Trigger: TTCAGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTTCCATGCTGCCACTaGTTACACGCGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGLPCCH*LHASQS
Trigger: AGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAG...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACATCAGAGAGGTGGGGATaGAACCACGCTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTSERWG*NHACAA
Trigger: AGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGA...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACTCTTCCCGAGACACTaGCGACAGCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLLFPRH*RQQLPP
Trigger: AGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAG...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACCTCTTCCCGAGACACTaGCGACAGCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNLFPRH*RQQLPP
Trigger: AGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAG...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACTAGCCGCAGCGTCCTaGGTGAGGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSLAAAS*VRKEEK
Trigger: CTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAG...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGTGCTGTTGCTGCTGCTaGGGTTGCTGCCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRCCCCC*GCCPDP
Trigger: AGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCA...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACTGCTGTTGCTGCTGCTaGGGTTGCTGCCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHCCCCC*GCCPDP
Trigger: AGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCA...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTATTGTGCAGGGAGTCCTaGCTGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLLCRES*LLLLLL
Trigger: CAGCAGCAGCAACAGCAGCCAGGACTCCCTGCACAA...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGTTGTGCAGGGAGTCCTaGCTGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRLCRES*LLLLLL
Trigger: CAGCAGCAGCAACAGCAGCCAGGACTCCCTGCACAA...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACCATCCCGACTCAGCTaGATCAGCCTGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSPSRLS*ISLPFS
Trigger: GGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGG...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCATCCCGACTCAGCTaGATCAGCCTGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPPSRLS*ISLPFS
Trigger: GGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGG...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACGCAGAACATGGCCTGTaGCTCCATCCCGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHAEHGL*LHPDSA
Trigger: AGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGC...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCTGTTAGCAGAACATaGCCTGTGGCTCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLSVSRT*PVAPSR
Trigger: TCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGA...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGTCCTTCTTGGTGAGGTaGTCCAGCATGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMSFLVR*SSMRAS
Trigger: GGACGCCCGCATGCTGGACCACCTCACCAAGAAGGA...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGTCCTTCTTGGTGAGGTaGTCCAGCATGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTSFLVR*SSMRAS
Trigger: GGACGCCCGCATGCTGGACCACCTCACCAAGAAGGA...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAACCACCTGGTCGTTaGTCCAGACTAACACATCCT +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEEPPGR*SRLTHP
Trigger: AGGATGTGTTAGTCTGGACCAACGACCAGGTGGTTC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAACCACCTGGTCGTTaGTCCAGACTAACACATCCT +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPEPPGR*SRLTHP
Trigger: AGGATGTGTTAGTCTGGACCAACGACCAGGTGGTTC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGAACCACCTGGTCGTTaGTCCAGACTAACACATCCT +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQEPPGR*SRLTHP
Trigger: AGGATGTGTTAGTCTGGACCAACGACCAGGTGGTTC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTAGGGCCAGTGTGTTGTaGTCGAAGTTCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGRASVL*SKFSSR
Trigger: CCTGGACGAGAACTTCGACCACAACACACTGGCCCT...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCCCTGGGTGTTCTGTGTaGGGATCTGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVPGCSV*GSGGSG
Trigger: CCCTGATCCTCCAGATCCCCACACAGAACACCCAGG...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAACCTGGGTGTTCTGTGTaGGGATCTGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQPGCSV*GSGGSG
Trigger: CCCTGATCCTCCAGATCCCCACACAGAACACCCAGG...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCATCTCTTTCCATCACTTaGCGTGCCTGGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPSLSIT*RAWVFC
Trigger: ACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGA...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCGCAGGGTCCCCAGGGTaGACACACGGAAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCAGSPG*THGSPP
Trigger: CGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGC...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCACAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACCCAGGATCCTGGTCCTaGTGGAGGTTGCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHPGSWS*WRLQCR
Trigger: TCTGCACTGCAACCTCCACCAGGACCAGGATCCTGG...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGCCAGGATCCTGGTCCTaGTGGAGGTTGCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRPGSWS*WRLQCR
Trigger: TCTGCACTGCAACCTCCACCAGGACCAGGATCCTGG...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAAATGACCCTTTCTTaGAAGGACCATCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPEMTLS*KDHPSL
Trigger: CAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGAAATGACCCTTTCTTaGAAGGACCATCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEEMTLS*KDHPSL
Trigger: CAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGTGGCACAGCCAGACGTaGATAGACACCCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWWHSQT*IDTLRL
Trigger: CAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCA...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGAGCCTCACCATCCTGTaGGAGAATGGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGSLTIL*ENGAFS
Trigger: ACTGAAGGCCCCATTCTCCCACAGGATGGTGAGGCT...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGCTTATGCCAGGGCCTaGAATCTCTACCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEAYARA*NLYLSL
Trigger: AAGACTGAGGTAGAGATTCCAGGCCCTGGCATAAGC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCTTATGCCAGGGCCTaGAATCTCTACCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPAYARA*NLYLSL
Trigger: AAGACTGAGGTAGAGATTCCAGGCCCTGGCATAAGC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGCCCCATCCTCACCCTTaGCTCAGAGCTCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMPHPHP*LRAQGS
Trigger: GGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGG...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGGGCTCTCCCTCTGGCTaGTCTGCCTATGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWGSPSG*SAYASY
Trigger: ATAAGAAGCATAGGCAGACCAGCCAGAGGGAGAGCC...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAAGGAGCTCCACCCGATaGTTGGGGCAGGGGACATTC +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSRSSTR*LGQGTF
Trigger: GAATGTCCCCTGCCCCAACCATCGGGTGGAGCTCCT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTGCCTTCACCAACATTaGATTTCCTGGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPECLHQH*ISWTWD
Trigger: GTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGGACAAGCAAGAGAGTaGCTGCCTTCACCAACATTG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQGQARE*LPSPTL
Trigger: CAATGTTGGTGAAGGCAGCCACTCTCTTGCTTGTCC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTACTGTATCCCTCAGCTTaGGTTCCCATCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLLYPSA*VPIMLL
Trigger: CAGCAGCATGATGGGAACCCAAGCTGAGGGATACAG...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTCTGGACTGAGTCCCTaGTTAAAATTCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGSGLSP*LKFKPG
Trigger: GCCTGGCTTGAATTTTAACCAGGGACTCAGTCCAGA...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTAGAGGGCTCCAGGCACTaGGAGATGTTGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLEGSRH*EMLEGM
Trigger: CATCCCTTCCAACATCTCCCAGTGCCTGGAGCCCTC...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACGAGGGCTCCAGGCACTaGGAGATGTTGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNEGSRH*EMLEGM
Trigger: CATCCCTTCCAACATCTCCCAGTGCCTGGAGCCCTC...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR TCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGCCGCCAAGGTCTCCTaGCTCTCCCGAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHAAKVS*LSRRDS
Trigger: GGAGTCTCTTCGGGAGAGTCAGGAGACCTTGGCGGC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATAGCTCAAACAGTGACTTaGGGGCCTTCAGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIAQTVT*GPSAPP
Trigger: TGGAGGTGCTGAAGGCCCTCAAGTCACTGTTTGAGC...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCTCCCGGAGGTCCCGCTaGTGCTTGCTGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSSRRSR*CLLLSS
Trigger: GGAGCTGAGCAGCAAGCATCAGCGGGACCTCCGGGA...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGTCTCCAGCTTGTCATTaGGGTCATGGATGGATGTTG +
Preference number: 4 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQSPACH*GHGWML
Trigger: CAACATCCATCCATGACCTCAATGACAAGCTGGAGA...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR TCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCGGTGCAGGGCATTGCTaGTGCCGATCTCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSGAGHC*CRSPAG
Trigger: TCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACC...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAAGAGGGGCTGGTCAATaGCACCATCTCCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPRGAGQ*HHLLNG
Trigger: GCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCT...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGAGGGGCTGGTCAATaGCACCATCTCCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSRGAGQ*HHLLNG
Trigger: GCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCT...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGCACATGATGCCATACTaGAGACTGGTTCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWHMMPY*RLVRWK
Trigger: CTTCCATCGAACCAGTCTTCAGTATGGCATCATGTG...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACACATGATGCCATACTaGAGACTGGTTCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPHMMPY*RLVRWK
Trigger: CTTCCATCGAACCAGTCTTCAGTATGGCATCATGTG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGAGGCCAACAGGTTATTaGACTCTCTTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGRPTGY*TLFPSL
Trigger: AAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCT...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGAGGCCAACAGGTTATTaGACTCTCTTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: GVRARGACETQKEEASPGRPTGY*TLFPSL
Trigger: AAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCT...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATCTCCGCGGAAGCGCTaGGCATGCCGCCGCGACCGT +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSSPRKR*ACRRDR
Trigger: ACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGTGGACGAATATATTCTaGGATCCAGGGCAACCGGAA +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGWTNIF*DPGQPE
Trigger: TTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCA...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGGGCTGCGTCTGAAATaGCCCTTTCTTGGAAGGACC +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQGLRLK*PFLGRT
Trigger: GGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCC...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGGGTTGGGAGAGTGGTaGTGCTGGGGATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSGLGEW*CWGCQN
Trigger: GTTTTGGCATCCCCAGCATCACCACTCTCCCAACCC...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAGAACTGCAGTCACGGTaGTGGGTTGGGAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEELQSR*WVGRVV
Trigger: CACCACTCTCCCAACCCATCACCGTGACTGCAGTTC...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTCCATCAAGAGCACCCTaGAGGAGTCAGATGGCTATG +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGPSRAP*RSQMAM
Trigger: CATAGCCATCTGACTCCTTCAGGGTGCTCTTGATGG...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGGGAGAGGCTGGGACTaGGTCTCCCTTACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHGRGWD*VSLTAS
Trigger: GCTGGCTGTAAGGGAGACTCAGTCCCAGCCTCTCCC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGCTCCAGGGGTCAGAATaGGCCAGGGGAGAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTLQGSE*ARGESS
Trigger: GGAACTTTCTCCCCTGGCTCATTCTGACCCCTGGAG...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR TCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACTCCAGGGGTCAGAATaGGCCAGGGGAGAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSLQGSE*ARGESS
Trigger: GGAACTTTCTCCCCTGGCTCATTCTGACCCCTGGAG...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR GCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCACTCCCATAGGCGCTaGAGAAACAGACACTCTTCG +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWHSHRR*RNRHSS
Trigger: CGAAGAGTGTCTGTTTCTGCAGCGCCTATGGGAGTG...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGATGTTCACCATCAGCTaGTCGAAGTTGGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMMFTIS*SKLASA
Trigger: TGCTGACGCCAACTTCGAGCAGCTGATGGTGAACAT...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCGCACCCCTGCCCCCTaGTGCAGGGCAGACACCTGC +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGARTPAP*CRADTC
Trigger: GCAGGTGTCTGCCCTGCAGCAGGGGGCAGGGGTGCG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCCATCCCGCACCCCTaGCCCCTGCTGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCSIPHP*PLLQGR
Trigger: TCTGCCCTGCAGCAGGGGGCAGGGGTGCGGGATGGA...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTTTGCGCATCGTCTGCTaGAGCTTCTGCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSLRIVC*SFCSAT
Trigger: GGTGGCAGAGCAGAAGCTGCAGCAGACGATGCGCAA...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTGGTGCTCCTCAATGTTaGCATGCCGTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGGAPQC*HAVLQP
Trigger: AGGCTGAAGAACGGCATGGCAACATTGAGGAGCACC...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAATCCAGCTGCCGCAGGTaGTCCTCAATGTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQESSCRR*SSMLPC
Trigger: GCATGGCAACATTGAGGAGCACCTGCGGCAGCTGGA...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGTCCAGCTGCCGCAGGTaGTCCTCAATGTTGCCATGC +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMSSCRR*SSMLPC
Trigger: GCATGGCAACATTGAGGAGCACCTGCGGCAGCTGGA...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAATGCTGCTCCTCAATCTaGCGCTGGGAGCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQECCSSI*RWELSN
Trigger: GTTGGAGAGCTCCCAGCGGCAGATTGAGGAGCAGCA...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGAGACTCTTCCCTCAATaGCGAGTAGCGGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRRLFPQ*RVAAMH
Trigger: GTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCT...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACGGTTTAGGGCTTCCATaGTGCCACTGGTTACACGCG +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNGLGLP*CHWLHA
Trigger: CGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACC...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAAGCAGCTTCCTCCTATaGTTTCTTAAGTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPSSFLL*FLKSLG
Trigger: GCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR GCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAACCTCCAAGGCACTCTTaGCTTCTTCCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEPPRHS*LLPGSG
Trigger: CCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGG...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTAGGGCATTCCTTTCCTaGGGGCATCTTCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGRAFLS*GHLQAA
Trigger: AGCTGCTTGAAGATGCCCGCAGGAAAGGAATGCCCT...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCCTCATGCAGGTTTCCTaGGTAGTCCCGGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVLMQVS*VVPEPN
Trigger: ATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAG...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCCTCATGCAGGTTTCCTaGGTAGTCCCGGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGILMQVS*VVPEPN
Trigger: ATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAG...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATACTCATGCAGGTTTCCTaGGTAGTCCCGGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKILMQVS*VVPEPN
Trigger: ATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAG...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGGCCAGCAAGGCTCCATaGACACCACTCTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTASKAP*TPLSCR
Trigger: CCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGC...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGGCCAGCAAGGCTCCATaGACACCACTCTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMASKAP*TPLSCR
Trigger: CCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGC...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGCCAGCAAGGCTCCATaGACACCACTCTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSASKAP*TPLSCR
Trigger: CCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGC...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAGATGCCAAAACCAGCTaGCAGACCATTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQDAKTS*QTIWHS
Trigger: GCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATC...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACAATGGGGGCAGGAACTaGAGTCACGGTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNNGGRN*SHGDGL
Trigger: CAACCCATCACCGTGACTGCAGTTCCTGCCCCCATT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGTTGGGATTCAGCTTATaGCAGGGCCTGGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGLGFSL*QGLESL
Trigger: TAGAGATTCCAGGCCCTGGCATAAGCTGAATCCCAA...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGTGGCTGGTCTGCCTATaGTTCTTATTAGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMWLVCL*FLLGGS
Trigger: GCTCCCACCTAATAAGAAGCATAGGCAGACCAGCCA...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGTCCCTCTGGCTGGTCTaGCTATGCTTCTTATTAGGT +
Preference number: 4 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQSLWLV*LCFLLG
Trigger: ACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGA...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGTGGTTAGATCTGTTCTaGCCTAGAGTCAAGATCCGC +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGWLDLF*PRVKIR
Trigger: GCGGATCTTGACTCTAGGGCAGAACAGATCTAACCA...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGTGGTTAGATCTGTTCTaGCCTAGAGTCAAGATCCGC +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGWLDLF*PRVKIR
Trigger: GCGGATCTTGACTCTAGGGCAGAACAGATCTAACCA...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCCCTGTAGGATGGCACTaGACTGGCCCCTATCCAAGA +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGIPVGWH*TGPYPR
Trigger: TCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGG...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACCCTGTAGGATGGCACTaGACTGGCCCCTATCCAAGA +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHPVGWH*TGPYPR
Trigger: TCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGG...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATTGCAAGCCTAGTCCCTaGTCAGAACTCAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNCKPSP*SELKVI
Trigger: GATCACCTTGAGTTCTGAGCAGGGACTAGGCTTGCA...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGTTTAAGCCCTGGCACTaGCCAGGTGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRFKPWH*PGAIAP
Trigger: AGGAGCAATGGCACCTGGGCAGTGCCAGGGCTTAAA...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGGGCAGGTGGCTGCCTTaGCCAAGCCTAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRGRWLP*PSLRES
Trigger: GCTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCC...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTATCCTGGCACAGCTGCTaGCTTACGACATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLSWHSC*LTTWPT
Trigger: TGTTGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGA...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACCTATCCTGGCACAGCTaGTGCCTTACGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNLSWHS*CLTTWP
Trigger: TGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGATAG...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCAACACTTCTCAAGGTaGTCTGAATGGACCCAGCTA +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEQHFSR*SEWTQL
Trigger: TAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACAACACTTCTCAAGGTaGTCTGAATGGACCCAGCTA +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPQHFSR*SEWTQL
Trigger: TAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTTCTTAACACCTCCCTaGAACACTTCTCAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGFLTPP*NTSQGA
Trigger: AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAA...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTGGCAGATGGCAGGCCTaGCCACGGAGAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLGRWQA*PRRELD
Trigger: GTCCAGCTCTCTCCGTGGCCAGGCCTGCCATCTGCC...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCATCAGCTGCTCGAAGTTaGCGTCAGCATCGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPSAARS*RQHRRH
Trigger: ATGGCGCCGATGCTGACGCCAACTTCGAGCAGCTGA...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGGAGCCGGCTCTGTGTaGCCGCCAAGGTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNGAGSV*PPRSPD
Trigger: GTCAGGAGACCTTGGCGGCCACACAGAGCCGGCTCC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCAGGTGGCGCTGGAGCTaGTCCCGCTCGTGTATGGCA +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSRWRWS*SRSCMA
Trigger: TGCCATACACGAGCGGGACCAGCTCCAGCGCCACCT...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGTCCATGTCCTCCTTCTaGGCCAGAGCCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRSMSSF*ARASRR
Trigger: CCTCCGGGAGGCTCTGGCCCAGAAGGAGGACATGGA...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGTCCATGTCCTCCTTCTaGGCCAGAGCCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: KQESGCLHQHWISWTWDMSMSSF*ARASRR
Trigger: CCTCCGGGAGGCTCTGGCCCAGAAGGAGGACATGGA...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTTGTCATTGAGGTCATaGATGGATGTTGCCTCACGC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPELSLRS*MDVASR
Trigger: GCGTGAGGCAACATCCATCCATGACCTCAATGACAA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCATTCATCTTTTCCCGCTaGCGCACCTGCACAGCCGTC +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPFIFSR*RTCTAV
Trigger: GACGGCTGTGCAGGTGCGCCAGCGGGAAAAGATGAA...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAATGTGCGACCTGGAGTaGACGCCATCCACAAACGGC +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEMCDLE*TPSTNG
Trigger: GCCGTTTGTGGATGGCGTCCACTCCAGGTCGCACAT...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATGCCCATGTGCGACCTaGAGTGGACGCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSCPCAT*SGRHPQ
Trigger: TTGTGGATGGCGTCCACTCCAGGTCGCACATGGGCA...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGCGGCGATGCACGCCTaGGGGTGCGTGTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNAAMHA*GCVCGC
Trigger: ACAACCACACACGCACCCCCAGGCGTGCATCGCCGC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGCGGCGATGCACGCCTaGGGGTGCGTGTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSAAMHA*GCVCGC
Trigger: ACAACCACACACGCACCCCCAGGCGTGCATCGCCGC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATCTTCCATGCTGCCACTaGTTACACGCGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNLPCCH*LHASQS
Trigger: AGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAG...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGGGCCGTCAGAGAGGTaGGGATGGAACCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHGPSER*GWNHAC
Trigger: GCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGGGGCCGTCAGAGAGGTaGGGATGGAACCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRGPSER*GWNHAC
Trigger: GCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCC...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAATTCGGTCCAGGTCCTaGGCAGCACTGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQIRSRS*AALREV
Trigger: CACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAAT...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCTCTTCCCGAGACACTaGCGACAGCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNLFPRH*RQQLPP
Trigger: AGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAG...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATGCTGTTGCTGCTGCTaGGGTTGCTGCCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSCCCCC*GCCPDP
Trigger: AGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCA...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGTGCTGTTGCTGCTGCTaGGGTTGCTGCCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTCCCCC*GCCPDP
Trigger: AGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCA...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTGCAGAACATGGCCTGTaGCTCCATCCCGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSAEHGL*LHPDSA
Trigger: AGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGC...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGCATCTTCAAGCAGCTaGTGTTTCTTCTTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPASSSS*CFFFSR
Trigger: GCGGCTAAAGAAGAAACACCAGCTGCTTGAAGATGC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGCATCTTCAAGCAGCTaGTGTTTCTTCTTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEASSSS*CFFFSR
Trigger: GCGGCTAAAGAAGAAACACCAGCTGCTTGAAGATGC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTGTAGGACCATCCCACTaGGCAAAGGGCATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGVGPSH*AKGIPF
Trigger: GAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTAC...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAGTGGGGCAGAGGGGCTaGTCAATGACACCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEVGQRG*SMTPSP
Trigger: AGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCAC...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATCCTTGATCTCATGCTaGCTCTCCTCTCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQSLISC*LSSRLF
Trigger: GAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGAACCACCTGGTCGTTaGTCCAGACTAACACATCCT +
Preference number: 4 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMEPPGR*SRLTHP
Trigger: AGGATGTGTTAGTCTGGACCAACGACCAGGTGGTTC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGGGCCAGTGTGTTGTaGTCGAAGTTCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVRASVL*SKFSSR
Trigger: CCTGGACGAGAACTTCGACCACAACACACTGGCCCT...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATCACTTGGCGTGCCTaGGTGTTCTGTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVITWRA*VFCVGI
Trigger: GATCCCCACACAGAACACCCAGGCACGCCAAGTGAT...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCAAGCATGGACAACCTaGGTGCCTCCACAATACCAG +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWQAWTT*VPPQYQ
Trigger: CTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCCCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSPEEEG*LHIHPE
Trigger: CTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGG...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPGSWSW*RLQCRP
Trigger: TGGTCTGCACTGCAACCTCCACCAGGACCAGGATCC...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNGSWSW*RLQCRP
Trigger: TGGTCTGCACTGCAACCTCCACCAGGACCAGGATCC...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACCAGGATCCTGGTCCTaGTGGAGGTTGCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSPGSWS*WRLQCR
Trigger: TCTGCACTGCAACCTCCACCAGGACCAGGATCCTGG...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACACATTGGCTCTCCCTCTaGCTGGTCTGCCTATGCTTC +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTHWLSL*LVCLCF
Trigger: GAAGCATAGGCAGACCAGCCAGAGGGAGAGCCAATG...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCATGGATTTCCTGGACCTaGGACATGAATCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPWISWT*DMNHCR
Trigger: CCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCA...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAACTGGACTGGGTGCCCTaGCCCATTATCTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQELDWVP*PIISPA
Trigger: TGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAG...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAATTGCTCCTTCTGGACTaGGTGCCCTGGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQLLLLD*VPWPII
Trigger: GATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAA...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGTCCATTACCCAGGGATaGGAGCTGTTTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEESITQG*ELFISI
Trigger: GATGGAGATAAACAGCTCCCATCCCTGGGTAATGGA...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGATACAGGAGGCTGGTGTaGAGGGCTCGGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGYRRLV*RARVTG
Trigger: ACCAGTGACCCGAGCCCTCCACACCAGCCTCCTGTA...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAAGGCGAGTGGACAGGTaGGCAGGGGCTTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGRRVDR*AGASPI
Trigger: TATGGGAGAAGCCCCTGCCCACCTGTCCACTCGCCT...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR TCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATTCTCCAGCTTGTCATTaGGGTCATGGATGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNSPACH*GHGWML
Trigger: CAACATCCATCCATGACCTCAATGACAAGCTGGAGA...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGAATGACACCATCTCCTaGATGGCCAGGCGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMNDTIS*MARRSL
Trigger: CAAGCTCCGCCTGGCCATTCAGGAGATGGTGTCATT...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACAATGACACCATCTCCTaGATGGCCAGGCGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNNDTIS*MARRSL
Trigger: CAAGCTCCGCCTGGCCATTCAGGAGATGGTGTCATT...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGCCATCTCTTCATGGGTaGCCCAGACATTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRPSLHG*PRHSQK
Trigger: CTTCTGGGAATGTCTGGGTCACCCATGAAGAGATGG...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATCACATGATGCCATACTaGAGACTGGTTCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNHMMPY*RLVRWK
Trigger: CTTCCATCGAACCAGTCTTCAGTATGGCATCATGTG...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATAGACTGGACCCAATaGACCACCTGGTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVIDWTQ*TTWSLV
Trigger: GACCAACGACCAGGTGGTTCATTGGGTCCAGTCTAT...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACGGGCTGCGTCTGAAATaGCCCTTTCTTGGAAGGACC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNGLRLK*PFLGRT
Trigger: GGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCC...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTAAGCAGGGCTGCGTCTaGAATGACCCTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGKQGCV*NDPFLE
Trigger: TTCCAAGAAAGGGTCATTTCAGACGCAGCCCTGCTT...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSPGPGT*ITVGEA
Trigger: AGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGG...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGGGAGAGGCTGGGACTaGGTCTCCCTTACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNGRGWD*VSLTAS
Trigger: GCTGGCTGTAAGGGAGACTCAGTCCCAGCCTCTCCC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAACTTCTCAAGGTGCTCTaGATGGACCCAGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQLLKVL*MDPAIL
Trigger: CAGGATAGCTGGGTCCATTCAGAGCACCTTGAGAAG...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGTGCGACCTTGAGCGGTaGTGGGGGAGAGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTCDLER*WGREKT
Trigger: TGTCTTTTCTCTCCCCCATCACCGCTCAAGGTCGCA...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR TCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGCCCATGTGCGACCTTaGGCGGTGATGGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNAHVRP*AVMGER
Trigger: TCTCTCCCCCATCACCGCTCAAGGTCGCACATGGGC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR GCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTATGTTCACCATCAGCTaGTCGAAGTTGGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGMFTIS*SKLASA
Trigger: TGCTGACGCCAACTTCGAGCAGCTGATGGTGAACAT...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAACCCCTGCCCCCTGCTaGAGGGCAGACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSTPAPC*RADTCW
Trigger: CCAGCAGGTGTCTGCCCTGCAGCAGGGGGCAGGGGT...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGTCTGCTGCAGCTTCTaGTCTGCCACCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHVCCSF*SATSSS
Trigger: GCTGCTGGAGGTGGCAGAGCAGAAGCTGCAGCAGAC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGATTGCGCATCGTCTGCTaGAGCTTCTGCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGLRIVC*SFCSAT
Trigger: GGTGGCAGAGCAGAAGCTGCAGCAGACGATGCGCAA...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGCTCTGGCAGCGTCTCTaGCTTGCGCATCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRLWQRL*LAHRLL
Trigger: CAGCAGACGATGCGCAAGGCAGAGACGCTGCCAGAG...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTCCTCAATGTTGCCATaGCGTTCTTCAGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGSSMLP*RSSALV
Trigger: CACCAAGGCTGAAGAACGGCATGGCAACATTGAGGA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCTCCTCAATGTTGCCATaGCGTTCTTCAGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGSSMLP*RSSALV
Trigger: CACCAAGGCTGAAGAACGGCATGGCAACATTGAGGA...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCCTCCAGGGCAGCCATaGGCTCCTTCAGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNPPGQP*APSGGA
Trigger: AGCTCCACCTGAAGGAGCGCATGGCTGCCCTGGAGG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGAACCGCACGTCTGCTaGACTGCCCATGTGCGACCT +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHEPHVC*TAHVRP
Trigger: AGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACAGACTCTTCCCTCAATaGCGAGTAGCGGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNRLFPQ*RVAAMH
Trigger: GTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCT...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTCTTCCCTCAATaGCGAGTAGCGGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTRLFPQ*RVAAMH
Trigger: GTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCT...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGGTTTAGGGCTTCCATaGTGCCACTGGTTACACGCG +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSGLGLP*CHWLHA
Trigger: CGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACC...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGACCACGCTTGCGCAGCTaGTTCAGGTTTAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGPRLRS*FRFRAS
Trigger: GGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGG...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAGGATGGAACCACGCTTaGGCAGCTGCTTCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTGWNHA*AAASGL
Trigger: TAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCC...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACAGGGCATTCCTTTCCTaGGGGCATCTTCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHRAFLS*GHLQAA
Trigger: AGCTGCTTGAAGATGCCCGCAGGAAAGGAATGCCCT...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACAGGGCATTCCTTTCCTaGGGGCATCTTCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNRAFLS*GHLQAA
Trigger: AGCTGCTTGAAGATGCCCGCAGGAAAGGAATGCCCT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAAGGGCATTCCTTTCCTaGGGGCATCTTCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQRAFLS*GHLQAA
Trigger: AGCTGCTTGAAGATGCCCGCAGGAAAGGAATGCCCT...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCGGAGCTTGAGCCGGTaGAGGGCATTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGARSLSR*RALLMP
Trigger: CGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAACATCCTTGATCTCATaGTGGCTCTCCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPTSLIS*WLSSRL
Trigger: GAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGT...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCTCATGCAGGTTTCCTaGGTAGTCCCGGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSLMQVS*VVPEPN
Trigger: ATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGCCAGCTTCCGGTCTGTaGCCAAGGCCAACAGGTTAT +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTPASGL*PRPTGY
Trigger: ATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGG...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCATGGACAACCTGGGTaGCTCCACAATACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWHGQPG*LHNTRK
Trigger: TTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATG...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAACATCCACCCTGAGCTaGCCTTCTCTCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGTSTLS*PSLLPP
Trigger: TGGGGGAAGGAGAGAAGGGCAGCTCAGGGTGGATGT...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGAATGGGGGCAGGAACTaGAGTCACGGTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMNGGRN*SHGDGL
Trigger: CAACCCATCACCGTGACTGCAGTTCCTGCCCCCATT...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAAATGGGGGCAGGAACTaGAGTCACGGTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPNGGRN*SHGDGL
Trigger: CAACCCATCACCGTGACTGCAGTTCCTGCCCCCATT...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAAAGGAGGCCTTAGTCTaGCTTTTCCCCAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLKEALV*LFPKLD
Trigger: GTCAAGTTTGGGGAAAAGGCAGACTAAGGCCTCCTT...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGTCCTTCTGGACTGGGTaGCCTGGCCCATTATCTCAC +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMSFWTG*PGPLSH
Trigger: GTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGA...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGCAGATGGCTATGCATTaGCCAACTCCACCAATCTTA +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEQMAMH*PTPPIL
Trigger: TAAGATTGGTGGAGTTGGGCAATGCATAGCCATCTG...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATCCTGGCACAGCTGCTaGCTTACGACATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSSWHSC*LTTWPT
Trigger: TGTTGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGA...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCTATCCTGGCACAGCTaGTGCCTTACGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSLSWHS*CLTTWP
Trigger: TGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGATAG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAGGAGGGCAGTGTGTCTaGAAATGCCGAAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQGGQCV*KCRRPG
Trigger: GCCTGGCCTTCGGCATTTGCAGACACACTGCCCTCC...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACACACATGGTGGGGGTTaGCAGGGCCTTCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHTHGGG*QGLLSV
Trigger: GACGCTGAGAAGGCCCTGCCAACCCCCACCATGTGT...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCTCGTGTATGGCATCCTaGAGCCGGCTCTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSSCMAS*SRLCVA
Trigger: GGCCACACAGAGCCGGCTCCAGGATGCCATACACGA...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAAGTCGCTCCCGGGCCTaGCTCAACTCAAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGSRSRA*LNSKFC
Trigger: GCAGAACTTTGAGTTGAGCCAGGCCCGGGAGCGACT...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATTTGTCATTGAGGTCATaGATGGATGTTGCCTCACGC +
Preference number: 4 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNLSLRS*MDVASR
Trigger: GCGTGAGGCAACATCCATCCATGACCTCAATGACAA...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATTGTCATTGAGGTCATaGATGGATGTTGCCTCACGC +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLLSLRS*MDVASR
Trigger: GCGTGAGGCAACATCCATCCATGACCTCAATGACAA...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACGCAGGGACTCCTTGTTaGCCAGCTCATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNAGTPC*PAHSPA
Trigger: AGCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGC...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGGGGCCGTCAGAGAGGTaGGGATGGAACCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQGPSER*GWNHAC
Trigger: GCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCC...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCATCTGTTAGCAGAACATaGCCTGTGGCTCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPSVSRT*PVAPSR
Trigger: TCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGA...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAATCTGTTAGCAGAACATaGCCTGTGGCTCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQSVSRT*PVAPSR
Trigger: TCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGA...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATAGTAGGACCATCCCACTaGGCAAAGGGCATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIVGPSH*AKGIPF
Trigger: GAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTAC...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCGTAGGACCATCCCACTaGGCAAAGGGCATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVVGPSH*AKGIPF
Trigger: GAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTAC...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCCTTCTTGGTGAGGTaGTCCAGCATGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQSFLVR*SSMRAS
Trigger: GGACGCCCGCATGCTGGACCACCTCACCAAGAAGGA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCTCCTTCTTGGTGAGGTaGTCCAGCATGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSSFLVR*SSMRAS
Trigger: GGACGCCCGCATGCTGGACCACCTCACCAAGAAGGA...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCTCCTTGATCTCATGCTaGCTCTCCTCTCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVSLISC*LSSRLF
Trigger: GAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGA...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACTCCTTGATCTCATGCTaGCTCTCCTCTCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNSLISC*LSSRLF
Trigger: GAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGA...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGTCTCTTTCCATCACTTaGCGTGCCTGGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKSLSIT*RAWVFC
Trigger: ACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGA...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCCAAGCATGGACAACCTaGGTGCCTCCACAATACCAG +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVQAWTT*VPPQYQ
Trigger: CTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCCAGAATCCCAAGCATaGACAACCTGGGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSPESQA*TTWVPP
Trigger: TGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGCCAGAAGAGGAAGGGTaGCTTCACATCCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTPEEEG*LHIHPE
Trigger: CTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGG...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATGTGGCCCAGGATCCTaGTCCTGGTGGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQCGPGS*SWWRLQ
Trigger: CTGCAACCTCCACCAGGACCAGGATCCTGGGCCACA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGGAAATGACCCTTTCTTaGAAGGACCATCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKEMTLS*KDHPSL
Trigger: CAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTC...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATGGCACAGCCAGACGTaGATAGACACCCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQWHSQT*IDTLRL
Trigger: CAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCCCCCATCCTCACCCTTaGCTCAGAGCTCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSPHPHP*LRAQGS
Trigger: GGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGG...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGAGAGCTAGCAATGCATaGTTAGATCTGTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGRASNA*LDLFCP
Trigger: AGGGCAGAACAGATCTAACCATGCATTGCTAGCTCT...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTGCCTTCACCAACATTaGATTTCCTGGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGCLHQH*ISWTWD
Trigger: GTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCA...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGGGACAAGCAAGAGAGTaGCTGCCTTCACCAACATTG +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGGQARE*LPSPTL
Trigger: CAATGTTGGTGAAGGCAGCCACTCTCTTGCTTGTCC...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAACTGTATCCCTCAGCTTaGGTTCCCATCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQLYPSA*VPIMLL
Trigger: CAGCAGCATGATGGGAACCCAAGCTGAGGGATACAG...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCAGGATGGCACTGCACTaGCCCCTATCCAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGIRMALH*PLSKKH
Trigger: GTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCT...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACTTGCTCCTTCTGGACTaGGTGCCCTGGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNLLLLD*VPWPII
Trigger: GATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAA...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCGAGAGCAAGGGCAGGTaGCTGCCTTGCCCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSESKGR*LPCPSL
Trigger: TAGGCTTGGGCAAGGCAGCCACCTGCCCTTGCTCTC...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGGAGAGCAAGGGCAGGTaGCTGCCTTGCCCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: KQESGCLHQHWISWTWDMESKGR*LPCPSL
Trigger: TAGGCTTGGGCAAGGCAGCCACCTGCCCTTGCTCTC...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCCTGAAGGAGTCAGATaGCTATGCATTGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWPEGVR*LCIAQL
Trigger: GAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGG...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATATGCTGCCTTACGACATaGCCAACAGTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKICCLTT*PTVAGV
Trigger: AACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCA...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATACAGGAGGCTGGTGTaGAGGGCTCGGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQYRRLV*RARVTG
Trigger: ACCAGTGACCCGAGCCCTCCACACCAGCCTCCTGTA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACGACACCCATCGTTTCTaGAGGGCAGTGTGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHDTHRF*RAVCLQ
Trigger: TTGCAGACACACTGCCCTCCAGAAACGATGGGTGTC...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGCAGGGACAGCAGGGCTaGAAGATGGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTQGQQG*KMALLL
Trigger: TAAGAGAAGGGCCATCTTCCAGCCCTGCTGTCCCTG...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGCTCTGAAAGGGGCCTaGGGTCTGGAGTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNALKGA*GLECPC
Trigger: ACAGGGGCACTCCAGACCCCAGGCCCCTTTCAGAGC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR TCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCCCGCAGCGTCCTGGGTaGGGAAGGAGGAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCPQRPG*GRRRSL
Trigger: GAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGG...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGCCATCTCTTCATGGGTaGCCCAGACATTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMPSLHG*PRHSQK
Trigger: CTTCTGGGAATGTCTGGGTCACCCATGAAGAGATGG...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAGCCTCTTCAGACACATaGTGCCATACTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTASSDT*CHTEDW
Trigger: CCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCGCCTCTTCAGACACATaGTGCCATACTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGIASSDT*CHTEDW
Trigger: CCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGAGACTAACACATCCTTaGTCTCATGCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKRLTHP*SHAGSP
Trigger: AGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCT...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGAGACTAACACATCCTTaGTCTCATGCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGRLTHP*SHAGSP
Trigger: AGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCT...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAATAGACTGGACCCAATaGACCACCTGGTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPIDWTQ*TTWSLV
Trigger: GACCAACGACCAGGTGGTTCATTGGGTCCAGTCTAT...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACATAGACTGGACCCAATaGACCACCTGGTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNIDWTQ*TTWSLV
Trigger: GACCAACGACCAGGTGGTTCATTGGGTCCAGTCTAT...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGAGGCCAACAGGTTATTaGACTCTCTTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGRPTGY*TLFPSL
Trigger: AAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCT...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAGGCCAACAGGTTATTaGACTCTCTTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEERPTGY*TLFPSL
Trigger: AAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR TCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGTGGACGAATATATTCTaGGATCCAGGGCAACCGGAA +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWWTNIF*DPGQPE
Trigger: TTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCA...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAGGGTTGGGAGAGTGGTaGTGCTGGGGATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQGLGEW*CWGCQN
Trigger: GTTTTGGCATCCCCAGCATCACCACTCTCCCAACCC...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGAACTGCAGTCACGGTaGTGGGTTGGGAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHELQSR*WVGRVV
Trigger: CACCACTCTCCCAACCCATCACCGTGACTGCAGTTC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTPGPGT*ITVGEA
Trigger: AGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGG...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGCCATACACCCATTCCTaGTGCACTGAGCAAATACAG +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGPYTHS*CTEQIQ
Trigger: CTGTATTTGCTCAGTGCATCAGGAATGGGTGTATGG...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACACTCCCATAGGCGCTaGAGAAACAGACACTCTTCG +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPHSHRR*RNRHSS
Trigger: CGAAGAGTGTCTGTTTCTGCAGCGCCTATGGGAGTG...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGCTGCTCCCGACACATaGTCAGCTCCCGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSAAPDT*SAPGLR
Trigger: CCTTAACCCGGGAGCTGAGCATGTGTCGGGAGCAGC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTGCTGCTCCCGACACATaGTCAGCTCCCGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAAAPDT*SAPGLR
Trigger: CCTTAACCCGGGAGCTGAGCATGTGTCGGGAGCAGC...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTGGTCCCGCTGATGCTTaGTGCTCAGCTCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAGPADA*CSAPPT
Trigger: AGTCGGAGGAGCTGAGCAGCAAGCATCAGCGGGACC...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCTGCACAGCCGTCCGTaGCAGCTCCTGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNLHSRP*QLLVLL
Trigger: GAGAAGAACCAGGAGCTGGCACGGACGGCTGTGCAG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTGCACGTCTGCTGCACTaGCCATGTGCGACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLARLLH*PCATWS
Trigger: ACTCCAGGTCGCACATGGGCAGTGCAGCAGACGTGC...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGAACCGCACGTCTGCTaGACTGCCCATGTGCGACCT +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSEPHVC*TAHVRP
Trigger: AGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGGGAGAACCGCACGTCTaGTGCACTGCCCATGTGCGA +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQGEPHV*CTAHVR
Trigger: TCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCC...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGGTGCGTGTGTGGTTGTaGCCAGGGAGAACCGCACGT +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQVRVWL*PGRTAR
Trigger: ACGTGCGGTTCTCCCTGGGCACAACCACACACGCAC...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTTTAGGGCTTCCATGCTaGCACTGGTTACACGCGTCT +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSLGLPC*HWLHAS
Trigger: AGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAA...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACCCACGCTTGCGCAGCTaGTTCAGGTTTAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHPRLRS*FRFRAS
Trigger: GGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGG...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGAGCAGCTTCCTCCTATaGTTTCTTAAGTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKSSFLL*FLKSLG
Trigger: GCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCT...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTAGTCCTGGCTGCTGTTaGTGCTGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLSPGCC*CCWGCC
Trigger: GCAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACT...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGGCACCATAGGCTCCTaGATACTGAATTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSGTIGS*ILNSES
Trigger: AGACTCCGAATTCAGTATGCAGGAGCCTATGGTGCC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATAGGCACCATAGGCTCCTaGATACTGAATTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIGTIGS*ILNSES
Trigger: AGACTCCGAATTCAGTATGCAGGAGCCTATGGTGCC...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTACATCCTTGATCTCATaGTGGCTCTCCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSTSLIS*WLSSRL
Trigger: GAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGT...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAACATCCTTGATCTCATaGTGGCTCTCCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSTSLIS*WLSSRL
Trigger: GAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACACATGGACAACCTGGGTaGCTCCACAATACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTHGQPG*LHNTRK
Trigger: TTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATG...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTTGGGATTCAGCTTATaGCAGGGCCTGGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGLGFSL*QGLESL
Trigger: TAGAGATTCCAGGCCCTGGCATAAGCTGAATCCCAA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTATGGCTGGTCTGCCTATaGTTCTTATTAGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLWLVCL*FLLGGS
Trigger: GCTCCCACCTAATAAGAAGCATAGGCAGACCAGCCA...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATCCCTCTGGCTGGTCTaGCTATGCTTCTTATTAGGT +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQSLWLV*LCFLLG
Trigger: ACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATGGTTAGATCTGTTCTaGCCTAGAGTCAAGATCCGC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQWLDLF*PRVKIR
Trigger: GCGGATCTTGACTCTAGGGCAGAACAGATCTAACCA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCTGCAAGCCTAGTCCCTaGTCAGAACTCAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSCKPSP*SELKVI
Trigger: GATCACCTTGAGTTCTGAGCAGGGACTAGGCTTGCA...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAACAACACTTCTCAAGGTaGTCTGAATGGACCCAGCTA +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQQHFSR*SEWTQL
Trigger: TAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTG...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGCAACACTTCTCAAGGTaGTCTGAATGGACCCAGCTA +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGQHFSR*SEWTQL
Trigger: TAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTG...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGGAGTTAAGGTGGCGCTaGAGCTGGTCCCGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQELRWR*SWSRSC
Trigger: ACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTC...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCCATGTCCTCCTTCTaGGCCAGAGCCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCSMSSF*ARASRR
Trigger: CCTCCGGGAGGCTCTGGCCCAGAAGGAGGACATGGA...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATTGTCATTGAGGTCATaGATGGATGTTGCCTCACGC +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQLSLRS*MDVASR
Trigger: GCGTGAGGCAACATCCATCCATGACCTCAATGACAA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGATGTGCGACCTGGAGTaGACGCCATCCACAAACGGC +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRMCDLE*TPSTNG
Trigger: GCCGTTTGTGGATGGCGTCCACTCCAGGTCGCACAT...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAAAGTCTCCCAGTCCTTaGCAGACTCTTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTKSPSP*QTLPSM
Trigger: CATTGAGGGAAGAGTCTGCCAAGGACTGGGAGACTT...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCATCTGAGTGGCCGCTaGGGGAGACAACATCCGCAG +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQHLSGR*GRQHPQ
Trigger: CTGCGGATGTTGTCTCCCCCAGCGGCCACTCAGATG...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCCGCGCGGAGCTCCGTaGACTCCTTCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNPRGAP*TPSLPE
Trigger: TTCAGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCCTTCCATGCTGCCACTaGTTACACGCGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGILPCCH*LHASQS
Trigger: AGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAG...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCTTGTGCAGGGAGTCCTaGCTGCTGTTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSLCRES*LLLLLL
Trigger: CAGCAGCAGCAACAGCAGCCAGGACTCCCTGCACAA...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCCATCCCGACTCAGCTaGATCAGCCTGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAPSRLS*ISLPFS
Trigger: GGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGTCTGTTAGCAGAACATaGCCTGTGGCTCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTSVSRT*PVAPSR
Trigger: TCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGA...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACGAACCACCTGGTCGTTaGTCCAGACTAACACATCCT +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHEPPGR*SRLTHP
Trigger: AGGATGTGTTAGTCTGGACCAACGACCAGGTGGTTC...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAAGGGCCAGTGTGTTGTaGTCGAAGTTCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGRASVL*SKFSSR
Trigger: CCTGGACGAGAACTTCGACCACAACACACTGGCCCT...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGCCTGGGTGTTCTGTGTaGGGATCTGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRPGCSV*GSGGSG
Trigger: CCCTGATCCTCCAGATCCCCACACAGAACACCCAGG...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAATCACTTGGCGTGCCTaGGTGTTCTGTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGITWRA*VFCVGI
Trigger: GATCCCCACACAGAACACCCAGGCACGCCAAGTGAT...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATATCTCTTTCCATCACTTaGCGTGCCTGGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKISLSIT*RAWVFC
Trigger: ACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGA...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGCAAGCATGGACAACCTaGGTGCCTCCACAATACCAG +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTQAWTT*VPPQYQ
Trigger: CTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACAAGCATGGACAACCTaGGTGCCTCCACAATACCAG +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPQAWTT*VPPQYQ
Trigger: CTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTTGTGGCCCAGGATCCTaGTCCTGGTGGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLCGPGS*SWWRLQ
Trigger: CTGCAACCTCCACCAGGACCAGGATCCTGGGCCACA...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGAAATGACCCTTTCTTaGAAGGACCATCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSEMTLS*KDHPSL
Trigger: CAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCGAAATGACCCTTTCTTaGAAGGACCATCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGIEMTLS*KDHPSL
Trigger: CAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTC...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGCTTATGCCAGGGCCTaGAATCTCTACCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSAYARA*NLYLSL
Trigger: AAGACTGAGGTAGAGATTCCAGGCCCTGGCATAAGC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTCCCCATCCTCACCCTTaGCTCAGAGCTCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLPHPHP*LRAQGS
Trigger: GGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGG...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACTGCCTTCACCAACATTaGATTTCCTGGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHCLHQH*ISWTWD
Trigger: GTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCA...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAGGACAAGCAAGAGAGTaGCTGCCTTCACCAACATTG +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTGQARE*LPSPTL
Trigger: CAATGTTGGTGAAGGCAGCCACTCTCTTGCTTGTCC...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGAGGATGGCACTGCACTaGCCCCTATCCAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMRMALH*PLSKKH
Trigger: GTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCT...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGCAGCCACCTGTAGGATaGCACTGCACTGGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRQPPVG*HCTGPY
Trigger: ATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTG...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACCAGCCACCTGTAGGATaGCACTGCACTGGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHQPPVG*HCTGPY
Trigger: ATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTG...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATTGCCATTGCTCCTTCTaGACTGGGTGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNCHCSF*TGCPGP
Trigger: TGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCA...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGAGAGCAAGGGCAGGTaGCTGCCTTGCCCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSESKGR*LPCPSL
Trigger: TAGGCTTGGGCAAGGCAGCCACCTGCCCTTGCTCTC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATGCTGCCTTACGACATaGCCAACAGTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSCCLTT*PTVAGV
Trigger: AACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCA...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTGGGGAACCCAGTGCATaGGTCTCAGAGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAGEPSA*VSEWAV
Trigger: CACTGCCCACTCTGAGACCCATGCACTGGGTTCCCC...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGTTCATCTTTTCCCGCTaGCGCACCCGTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQFIFSR*RTRASS
Trigger: GGAGCTGGCACGGGTGCGCCAGCGGGAAAAGATGAA...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR TCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATATTCTGCTTTCAGTTCTaGTATCTCTTCCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIFCFQF*YLFLPL
Trigger: GAGCGGGAGGAAGAGATATCAGAACTGAAAGCAGAA...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGTCTCCAGCTTGTCATTaGGGTCATGGATGGATGTTG +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRSPACH*GHGWML
Trigger: CAACATCCATCCATGACCTCAATGACAAGCTGGAGA...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAGGTGCAGGGCATTGCTaGTGCCGATCTCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSGAGHC*CRSPAG
Trigger: TCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACC...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTGGTGCAGGGCATTGCTaGTGCCGATCTCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAGAGHC*CRSPAG
Trigger: TCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACC...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACAGAGGGGCTGGTCAATaGCACCATCTCCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHRGAGQ*HHLLNG
Trigger: GCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCT...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGCCTCTTCAGACACATaGTGCCATACTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSASSDT*CHTEDW
Trigger: CCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGACTAACACATCCTTaGTCTCATGCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVRLTHP*SHAGSP
Trigger: AGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCT...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATATGGACGAATATATTCTaGGATCCAGGGCAACCGGAA +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIWTNIF*DPGQPE
Trigger: TTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCA...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAGGGCTGCGTCTGAAATaGCCCTTTCTTGGAAGGACC +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQGLRLK*PFLGRT
Trigger: GGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCC...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAAAGCAGGGCTGCGTCTaGAATGACCCTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSKQGCV*NDPFLE
Trigger: TTCCAAGAAAGGGTCATTTCAGACGCAGCCCTGCTT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAAAGCAGGGCTGCGTCTaGAATGACCCTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPKQGCV*NDPFLE
Trigger: TTCCAAGAAAGGGTCATTTCAGACGCAGCCCTGCTT...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGAAGCAGGGCTGCGTCTaGAATGACCCTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMKQGCV*NDPFLE
Trigger: TTCCAAGAAAGGGTCATTTCAGACGCAGCCCTGCTT...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTGAACTGCAGTCACGGTaGTGGGTTGGGAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAELQSR*WVGRVV
Trigger: CACCACTCTCCCAACCCATCACCGTGACTGCAGTTC...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATGGATGAGGGTTAGGTaGTTTGGGGACAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSWMRVR*FGDKQE
Trigger: CTCTTGCTTGTCCCCAAATCACCTAACCCTCATCCA...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTACCTGAACATAAGTCTTaGACATTTTCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLPEHKS*TFSGTL
Trigger: CAAGGTGCCTGAAAATGTTCAAGACTTATGTTCAGG...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTACCCCACCACACCAGTaGTGGGCCTCTCCTCTACCG +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGATPPHQ*WASPLP
Trigger: CGGTAGAGGAGAGGCCCATCACTGGTGTGGTGGGGT...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGACCATCAAGAGCACCCTaGAGGAGTCAGATGGCTATG +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGPSRAP*RSQMAM
Trigger: CATAGCCATCTGACTCCTTCAGGGTGCTCTTGATGG...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCGCCCTTCTCTTAGACTaGGTGCCGGAGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCALLLD*VPEAGR
Trigger: TCTGCCAGCCTCCGGCACTCAGTCTAAGAGAAGGGC...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR GCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAATGTTCACCATCAGCTaGTCGAAGTTGGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSMFTIS*SKLASA
Trigger: TGCTGACGCCAACTTCGAGCAGCTGATGGTGAACAT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTTCCCGCTCTAGAAGCTaGTCCCGACACATGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLSRSRS*SRHMLS
Trigger: GCTGAGCATGTGTCGGGAGCAGCTTCTAGAGCGGGA...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCAGACTCTTCCCTCAATaGCGAGTAGCGGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSRLFPQ*RVAAMH
Trigger: GTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCT...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAAGCAGCTTCCTCCTATaGTTTCTTAAGTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTSSFLL*FLKSLG
Trigger: GCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCT...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACAGCAGCTTCCTCCTATaGTTTCTTAAGTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNSSFLL*FLKSLG
Trigger: GCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGGGCACCATAGGCTCCTaGATACTGAATTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTGTIGS*ILNSES
Trigger: AGACTCCGAATTCAGTATGCAGGAGCCTATGGTGCC...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCCCAGCTTCCGGTCTGTaGCCAAGGCCAACAGGTTAT +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSPASGL*PRPTGY
Trigger: ATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGG...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAACCAGCTTCCGGTCTGTaGCCAAGGCCAACAGGTTAT +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQPASGL*PRPTGY
Trigger: ATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGG...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACTCCCTCTGGCTGGTCTaGCTATGCTTCTTATTAGGT +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHSLWLV*LCFLLG
Trigger: ACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGA...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAAAGGAGGCCTTAGTCTaGCTTTTCCCCAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQKEALV*LFPKLD
Trigger: GTCAAGTTTGGGGAAAAGGCAGACTAAGGCCTCCTT...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGTCCTTCTGGACTGGGTaGCCTGGCCCATTATCTCAC +
Preference number: 4 (lower is better)
Translates to: KQESGCLHQHWISWTWDMSFWTG*PGPLSH
Trigger: GTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGA...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCCTGCCCAGGTGCCATTaGTCCTTCTGGACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCLPRCH*SFWTGC
Trigger: GCACCCAGTCCAGAAGGAGCAATGGCACCTGGGCAG...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCTTTAAGCCCTGGCACTaGCCAGGTGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSFKPWH*PGAIAP
Trigger: AGGAGCAATGGCACCTGGGCAGTGCCAGGGCTTAAA...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAGGCAGGTGGCTGCCTTaGCCAAGCCTAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSGRWLP*PSLRES
Trigger: GCTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCC...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCAGATGGCTATGCATTaGCCAACTCCACCAATCTTA +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKQMAMH*PTPPIL
Trigger: TAAGATTGGTGGAGTTGGGCAATGCATAGCCATCTG...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCAAGGGCGGAGTTAAGGTaGCGCTGGAGCTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPRAELR*RWSWSR
Trigger: GCGGGACCAGCTCCAGCGCCACCTTAACTCCGCCCT...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCTTCATCTTTTCCCGCTaGCGCACCTGCACAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSFIFSR*RTCTAV
Trigger: GACGGCTGTGCAGGTGCGCCAGCGGGAAAAGATGAA...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCTGCCCATGTGCGACCTaGAGTGGACGCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSCPCAT*SGRHPQ
Trigger: TTGTGGATGGCGTCCACTCCAGGTCGCACATGGGCA...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAAGTCTCCCAGTCCTTaGCAGACTCTTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTKSPSP*QTLPSM
Trigger: CATTGAGGGAAGAGTCTGCCAAGGACTGGGAGACTT...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599966.5
CDS-3UTR CCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCTTCCATGCTGCCACTaGTTACACGCGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSLPCCH*LHASQS
Trigger: AGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTCTCACATTTTATGGTaGCTTTATCCTCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPESHILW*LYPLGS
Trigger: AGAACCGAGAGGATAAAGCCACCATAAAATGTGAGA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAAGTCTCACATTTTATaGTGGCTTTATCCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEKSHIL*WLYPLG
Trigger: ACCGAGAGGATAAAGCCACCATAAAATGTGAGACTT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGCATCTTCAAGCAGCTaGTGTTTCTTCTTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSASSSS*CFFFSR
Trigger: GCGGCTAAAGAAGAAACACCAGCTGCTTGAAGATGC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGGTGGGGCAGAGGGGCTaGTCAATGACACCATCTCCT +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQVGQRG*SMTPSP
Trigger: AGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCAC...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCAGGGCCAGTGTGTTGTaGTCGAAGTTCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSRASVL*SKFSSR
Trigger: CCTGGACGAGAACTTCGACCACAACACACTGGCCCT...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACAGGGCCAGTGTGTTGTaGTCGAAGTTCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHRASVL*SKFSSR
Trigger: CCTGGACGAGAACTTCGACCACAACACACTGGCCCT...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCCTGGGTGTTCTGTGTaGGGATCTGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAPGCSV*GSGGSG
Trigger: CCCTGATCCTCCAGATCCCCACACAGAACACCCAGG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGATCACTTGGCGTGCCTaGGTGTTCTGTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRITWRA*VFCVGI
Trigger: GATCCCCACACAGAACACCCAGGCACGCCAAGTGAT...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGCATGATCTTCTTTaGCGGGGCCGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSRHDLL*RGRWGL
Trigger: CAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCT...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAACCAGAATCCCAAGCATaGACAACCTGGGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQPESQA*TTWVPP
Trigger: TGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGG...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGGGATCCTGGTCCTGGTaGAGGTTGCAGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQGSWSW*RLQCRP
Trigger: TGGTCTGCACTGCAACCTCCACCAGGACCAGGATCC...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAATGGCACAGCCAGACGTaGATAGACACCCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEWHSQT*IDTLRL
Trigger: CAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCA...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGTGGCACAGCCAGACGTaGATAGACACCCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMWHSQT*IDTLRL
Trigger: CAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCA...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGCATTGGCTCTCCCTCTaGCTGGTCTGCCTATGCTTC +
Preference number: 4 (lower is better)
Translates to: KQESGCLHQHWISWTWDMHWLSL*LVCLCF
Trigger: GAAGCATAGGCAGACCAGCCAGAGGGAGAGCCAATG...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGAGAGCTAGCAATGCATaGTTAGATCTGTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGRASNA*LDLFCP
Trigger: AGGGCAGAACAGATCTAACCATGCATTGCTAGCTCT...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAAAGCTATTTTCTTCCTaGGAGGTCAGAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQKLFSS*EVRERR
Trigger: CCTCCTTTCTCTGACCTCCCAGGAAGAAAATAGCTT...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGAAGCTATTTTCTTCCTaGGAGGTCAGAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWKLFSS*EVRERR
Trigger: CCTCCTTTCTCTGACCTCCCAGGAAGAAAATAGCTT...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCTGGATTTCCTGGACCTaGGACATGAATCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVWISWT*DMNHCR
Trigger: CCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCA...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGTTGCTCCTTCTGGACTaGGTGCCCTGGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRLLLLD*VPWPII
Trigger: GATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAA...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAATCCATTACCCAGGGATaGGAGCTGTTTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQSITQG*ELFISI
Trigger: GATGGAGATAAACAGCTCCCATCCCTGGGTAATGGA...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGATGCTGCCTTACGACATaGCCAACAGTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGCCLTT*PTVAGV
Trigger: AACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCA...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAAACCAGGTTGTTTATTaGTACGTACACACCCACACT +
Preference number: 4 (lower is better)
Translates to: GCKAAAPATCRMALHWPLNQVVY*YVHTHT
Trigger: AGTGTGGGTGTGTACGTACCAATAAACAACCTGGTT...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGGGTCTCCCCATAATCTaGACTGAGTCCCTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRGLPII*TESLVK
Trigger: TTTAACCAGGGACTCAGTCCAGATTATGGGGAGACC...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAAGGGTCCCTGAACTGTaGTACTCTAAGTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSRVPEL*YSKLQQ
Trigger: CTGCTGCAACTTAGAGTACCACAGTTCAGGGACCCT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447715.6
CDS-3UTR TCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTTTCTGCTTTCAGTTCTaGTATCTCTTCCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSFCFQF*YLFLPL
Trigger: GAGCGGGAGGAAGAGATATCAGAACTGAAAGCAGAA...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGTTCTTCAGCCTTGGTaGGGGCTGCAATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNVLQPW*GLQFSG
Trigger: CCCAGAGAATTGCAGCCCTCACCAAGGCTGAAGAAC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACCCATCTCTTCATGGGTaGCCCAGACATTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHPSLHG*PRHSQK
Trigger: CTTCTGGGAATGTCTGGGTCACCCATGAAGAGATGG...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGCACATGATGCCATACTaGAGACTGGTTCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMHMMPY*RLVRWK
Trigger: CTTCCATCGAACCAGTCTTCAGTATGGCATCATGTG...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAACACATGATGCCATACTaGAGACTGGTTCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEHMMPY*RLVRWK
Trigger: CTTCCATCGAACCAGTCTTCAGTATGGCATCATGTG...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCAGGCCAACAGGTTATTaGACTCTCTTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGRPTGY*TLFPSL
Trigger: AAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCT...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACCCTGGACCTGGGACATaGATCACTGTAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHPGPGT*ITVGEA
Trigger: AGCTTCTCCTACAGTGATTCATGTCCCAGGTCCAGG...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGATGGATGAGGGTTAGGTaGTTTGGGGACAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGWMRVR*FGDKQE
Trigger: CTCTTGCTTGTCCCCAAATCACCTAACCCTCATCCA...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGCCATCAAGAGCACCCTaGAGGAGTCAGATGGCTATG +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRPSRAP*RSQMAM
Trigger: CATAGCCATCTGACTCCTTCAGGGTGCTCTTGATGG...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATCCTCACACTGGCGGTaGAGGGACTCCTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSSSHWR*RDSLLA
Trigger: GGCCAACAAGGAGTCCCTGCACCGCCAGTGTGAGGA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCACTCTGGCAGCGTCTCTaGCTTGCGCATCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSLWQRL*LAHRLL
Trigger: CAGCAGACGATGCGCAAGGCAGAGACGCTGCCAGAG...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGCACAGCCGTCCGTaGCAGCTCCTGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGALHSRP*QLLVLL
Trigger: GAGAAGAACCAGGAGCTGGCACGGACGGCTGTGCAG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCACCTCCAGGGCAGCCATaGGCTCCTTCAGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPPPGQP*APSGGA
Trigger: AGCTCCACCTGAAGGAGCGCATGGCTGCCCTGGAGG...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAGCACGTCTGCTGCACTaGCCATGTGCGACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSARLLH*PCATWS
Trigger: ACTCCAGGTCGCACATGGGCAGTGCAGCAGACGTGC...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTGAACCGCACGTCTGCTaGACTGCCCATGTGCGACCT +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAEPHVC*TAHVRP
Trigger: AGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTC...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATTAGGGCTTCCATGCTaGCACTGGTTACACGCGTCT +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQLGLPC*HWLHAS
Trigger: AGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAAGCAGCTTCCTCCTATaGTTTCTTAAGTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPSSFLL*FLKSLG
Trigger: GCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCT...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCATTGGGATTCAGCTTATaGCAGGGCCTGGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPLGFSL*QGLESL
Trigger: TAGAGATTCCAGGCCCTGGCATAAGCTGAATCCCAA...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGTCCCTCTGGCTGGTCTaGCTATGCTTCTTATTAGGT +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTSLWLV*LCFLLG
Trigger: ACCTAATAAGAAGCATAGGCAGACCAGCCAGAGGGA...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAAGCAAGAGAGTGGCTaGCTTCACCAACATTGGATT +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSKQESG*LHQHWI
Trigger: AATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAAAGCAAGAGAGTGGCTaGCTTCACCAACATTGGATT +
Preference number: 4 (lower is better)
Translates to: PATCRMALHWPLSKKHMPKQESG*LHQHWI
Trigger: AATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATAAAGCAAGAGAGTGGCTaGCTTCACCAACATTGGATT +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIKQESG*LHQHWI
Trigger: AATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCCTGTAGGATGGCACTaGACTGGCCCCTATCCAAGA +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAPVGWH*TGPYPR
Trigger: TCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGCCCATTATCTCACCTaGAAGCCTAGTCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHAHYLT*KPSPCS
Trigger: TGAGCAGGGACTAGGCTTGCAGGTGAGATAATGGGC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGTCCTTCTGGACTGGGTaGCCTGGCCCATTATCTCAC +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQSFWTG*PGPLSH
Trigger: GTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGA...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTTTTAAGCCCTGGCACTaGCCAGGTGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAFKPWH*PGAIAP
Trigger: AGGAGCAATGGCACCTGGGCAGTGCCAGGGCTTAAA...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAATCCAACTCATTTTCTaGTCAATAATCCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPIQLIF*SIIPPS
Trigger: AGATGGAGGGATTATTGAGCAGAAAATGAGTTGGAT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCTGGCACAGCTaGTGCCTTACGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQLSWHS*CLTTWP
Trigger: TGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGATAG...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCTTCTTAACACCTCCCTaGAACACTTCTCAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RWELRVSPSSPLAQSSGIFLTPP*NTSQGA
Trigger: AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAA...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCTGTGTCCCCAGACATaGAGACAGCAGCCGAATGTG +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGALCPQT*RQQPNV
Trigger: CACATTCGGCTGCTGTCTGCATGTCTGGGGACACAG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR GCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCATCAGTTGCTTTTaGTCTGAAAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRSISCF*SERGLG
Trigger: CCCCAGGCCCCTTTCAGAGCAAAAGCAACTGATGCT...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAACACATGGTGGGGGTTaGCAGGGCCTTCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSTHGGG*QGLLSV
Trigger: GACGCTGAGAAGGCCCTGCCAACCCCCACCATGTGT...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCACATCTGAGTGGCCGCTaGGGGAGACAACATCCGCAG +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSHLSGR*GRQHPQ
Trigger: CTGCGGATGTTGTCTCCCCCAGCGGCCACTCAGATG...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCACTAGCCGCAGCGTCCTaGGTGAGGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSLAAAS*VRKEEK
Trigger: CTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAG...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCCCTGGGTGTTCTGTGTaGGGATCTGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCPGCSV*GSGGSG
Trigger: CCCTGATCCTCCAGATCCCCACACAGAACACCCAGG...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATATCACTTGGCGTGCCTaGGTGTTCTGTGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNITWRA*VFCVGI
Trigger: GATCCCCACACAGAACACCCAGGCACGCCAAGTGAT...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCCAGAATCCCAAGCATaGACAACCTGGGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNPESQA*TTWVPP
Trigger: TGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCAGACCATCCCAGCCTGTaGCCCAGGATCCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPDHPSL*PRILVL
Trigger: CAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTC...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCAGCCTCACCATCCTGTaGGAGAATGGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSSLTIL*ENGAFS
Trigger: ACTGAAGGCCCCATTCTCCCACAGGATGGTGAGGCT...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGATGCTTCTTATTAGGTaGGAGCTTAGAGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWMLLIR*ELRVSP
Trigger: TGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCAT...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACGGCTCTCCCTCTGGCTaGTCTGCCTATGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHGSPSG*SAYASY
Trigger: ATAAGAAGCATAGGCAGACCAGCCAGAGGGAGAGCC...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCATTGGCTCTCCCTCTaGCTGGTCTGCCTATGCTTC +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQHWLSL*LVCLCF
Trigger: GAAGCATAGGCAGACCAGCCAGAGGGAGAGCCAATG...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACAAGCTATTTTCTTCCTaGGAGGTCAGAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNKLFSS*EVRERR
Trigger: CCTCCTTTCTCTGACCTCCCAGGAAGAAAATAGCTT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACCAACATTGGATTTCCTaGACCTGGGACATGAATCAC +
Preference number: 4 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHQHWIS*TWDMNH
Trigger: GTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTG...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACACAACATTGGATTTCCTaGACCTGGGACATGAATCAC +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTQHWIS*TWDMNH
Trigger: GTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTG...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCCAACATTGGATTTCCTaGACCTGGGACATGAATCAC +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSQHWIS*TWDMNH
Trigger: GTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTG...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGCTGTATCCCTCAGCTTaGGTTCCCATCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQESGCLHQHWISWTWDMLYPSA*VPIMLL
Trigger: CAGCAGCATGATGGGAACCCAAGCTGAGGGATACAG...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACAGGATGGCACTGCACTaGCCCCTATCCAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHRMALH*PLSKKH
Trigger: GTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCT...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGAGGATGGCACTGCACTaGCCCCTATCCAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: KQESGCLHQHWISWTWDMRMALH*PLSKKH
Trigger: GTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCT...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATGCCATTGCTCCTTCTaGACTGGGTGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSCHCSF*TGCPGP
Trigger: TGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTTCCATTACCCAGGGATaGGAGCTGTTTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSSITQG*ELFISI
Trigger: GATGGAGATAAACAGCTCCCATCCCTGGGTAATGGA...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGTCAAGGTGCTCTGAATaGACCCAGCTATCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRSRCSE*TQLSWH
Trigger: GTGCCAGGATAGCTGGGTCCATTCAGAGCACCTTGA...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCAAGGTGCTCTGAATaGACCCAGCTATCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQSRCSE*TQLSWH
Trigger: GTGCCAGGATAGCTGGGTCCATTCAGAGCACCTTGA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGTGCCATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGAACCAGGTTGTTTATTaGTACGTACACACCCACACT +
Preference number: 4 (lower is better)
Translates to: GAIAPSGLGALAHYLTCKNQVVY*YVHTHT
Trigger: AGTGTGGGTGTGTACGTACCAATAAACAACCTGGTT...CTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAATGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGGGTCTCCCCATAATCTaGACTGAGTCCCTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTGLPII*TESLVK
Trigger: TTTAACCAGGGACTCAGTCCAGATTATGGGGAGACC...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CCA 90 bp CAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCGAGCGGTTTTCCGTCTaGCATAAGAAGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: QAWTTWVPPQYQETPATSERFSV*HKKDLL
Trigger: TAGAAGATCCTTCTTATGCCAGACGGAAAACCGCTC...GGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAGAGCGGTTTTCCGTCTaGCATAAGAAGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTERFSV*HKKDLL
Trigger: TAGAAGATCCTTCTTATGCCAGACGGAAAACCGCTC...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR TCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCGCTCAAACAGTGACTTaGGGGCCTTCAGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCAQTVT*GPSAPP
Trigger: TGGAGGTGCTGAAGGCCCTCAAGTCACTGTTTGAGC...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCCCATCTCTTCATGGGTaGCCCAGACATTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSPSLHG*PRHSQK
Trigger: CTTCTGGGAATGTCTGGGTCACCCATGAAGAGATGG...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGACACATGATGCCATACTaGAGACTGGTTCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGHMMPY*RLVRWK
Trigger: CTTCCATCGAACCAGTCTTCAGTATGGCATCATGTG...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTATAGACTGGACCCAATaGACCACCTGGTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLIDWTQ*TTWSLV
Trigger: GACCAACGACCAGGTGGTTCATTGGGTCCAGTCTAT...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTATAGACTGGACCCAATaGACCACCTGGTCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAIDWTQ*TTWSLV
Trigger: GACCAACGACCAGGTGGTTCATTGGGTCCAGTCTAT...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCAGGCCAGAGGAGCCTGTaGAACCCAGAAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPGQRSL*NPEGGS
Trigger: GCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCC...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAAAGCAGGGCTGCGTCTaGAATGACCCTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQKQGCV*NDPFLE
Trigger: TTCCAAGAAAGGGTCATTTCAGACGCAGCCCTGCTT...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCCCTTTTCCCCAAACTTaGCTTTGGGCTCAATGTATA +
Preference number: 4 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVPFPQT*LWAQCI
Trigger: TATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGG...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACACCTTTTCCCCAAACTTaGCTTTGGGCTCAATGTATA +
Preference number: 4 (lower is better)
Translates to: TWVPPQYQETPATSTGLTPFPQT*LWAQCI
Trigger: TATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGG...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGCAAAATAGCCCTGGATaGGGGTTAGGTGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRQNSPG*GLGDLG
Trigger: CCCCAAATCACCTAACCCTCATCCAGGGCTATTTTG...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCTTCTCAAGGTGCTCTaGATGGACCCAGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGALLKVL*MDPAIL
Trigger: CAGGATAGCTGGGTCCATTCAGAGCACCTTGAGAAG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTATTTGCAAGGGGCTTTaGCGGGGAGGAGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAICKGL*RGGVWA
Trigger: TGCCCACACTCCTCCCCGGCAAAGCCCCTTGCAAAT...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTGGTGCTCCTCAATGTTaGCATGCCGTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAGAPQC*HAVLQP
Trigger: AGGCTGAAGAACGGCATGGCAACATTGAGGAGCACC...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGTTAGGGCTTCCATGCTaGCACTGGTTACACGCGTCT +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQLGLPC*HWLHAS
Trigger: AGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAA...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCTTAGGGCTTCCATGCTaGCACTGGTTACACGCGTCT +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSLGLPC*HWLHAS
Trigger: AGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAA...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCGGTTTAGGGCTTCCATaGTGCCACTGGTTACACGCG +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCGLGLP*CHWLHA
Trigger: CGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACC...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGGATGGAACCACGCTTaGGCAGCTGCTTCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNGWNHA*AAASGL
Trigger: TAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTGGATGGAACCACGCTTaGGCAGCTGCTTCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLGWNHA*AAASGL
Trigger: TAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCC...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTAGGGCATTCCTTTCCTaGGGGCATCTTCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGARAFLS*GHLQAA
Trigger: AGCTGCTTGAAGATGCCCGCAGGAAAGGAATGCCCT...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGACATCCTTGATCTCATaGTGGCTCTCCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQTSLIS*WLSSRL
Trigger: GAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGT...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTGATGCCAAAACCAGCTaGCAGACCATTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGADAKTS*QTIWHS
Trigger: GCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATC...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCAGGGGACATTCCCACTaGCCTTTGGGCTTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSRGHSH*PLGLRL
Trigger: TAGCCTTAAGCCCAAAGGGCAGTGGGAATGTCCCCT...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAAGCAAGAGAGTGGCTaGCTTCACCAACATTGGATT +
Preference number: 4 (lower is better)
Translates to: EGVDEYILRSRATGKSRTKQESG*LHQHWI
Trigger: AATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGCCCATTATCTCACCTaGAAGCCTAGTCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNAHYLT*KPSPCS
Trigger: TGAGCAGGGACTAGGCTTGCAGGTGAGATAATGGGC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACAGATGGCTATGCATTaGCCAACTCCACCAATCTTA +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSQMAMH*PTPPIL
Trigger: TAAGATTGGTGGAGTTGGGCAATGCATAGCCATCTG...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAATTCTTAACACCTCCCTaGAACACTTCTCAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEFLTPP*NTSQGA
Trigger: AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAA...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATGCCCATGTGCGACCTaGAGTGGACGCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSCPCAT*SGRHPQ
Trigger: TTGTGGATGGCGTCCACTCCAGGTCGCACATGGGCA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCAAGTCTCCCAGTCCTTaGCAGACTCTTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSKSPSP*QTLPSM
Trigger: CATTGAGGGAAGAGTCTGCCAAGGACTGGGAGACTT...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATCAGAGAGGTGGGGATaGAACCACGCTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSSERWG*NHACAA
Trigger: AGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCTCTCACATTTTATGGTaGCTTTATCCTCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGSHILW*LYPLGS
Trigger: AGAACCGAGAGGATAAAGCCACCATAAAATGTGAGA...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGAAGTCTCACATTTTATaGTGGCTTTATCCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWKSHIL*WLYPLG
Trigger: ACCGAGAGGATAAAGCCACCATAAAATGTGAGACTT...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCACCATCCCGACTCAGCTaGATCAGCCTGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPPSRLS*ISLPFS
Trigger: GGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGG...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGTAGGACCATCCCACTaGGCAAAGGGCATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNVGPSH*AKGIPF
Trigger: GAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTAC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTCTTTCCATCACTTaGCGTGCCTGGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQSLSIT*RAWVFC
Trigger: ACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCAGTGCAGACCAGGCTaGGTCCAGAAGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAQCRPG*VQKRKG
Trigger: ACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGGCTTATGCCAGGGCCTaGAATCTCTACCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRAYARA*NLYLSL
Trigger: AAGACTGAGGTAGAGATTCCAGGCCCTGGCATAAGC...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACTCCCAAACTCAAATTTaGGATTCAGCTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNSQTQI*DSAYAR
Trigger: CCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGA...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGATGCTTCTTATTAGGTaGGAGCTTAGAGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRMLLIR*ELRVSP
Trigger: TGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCAT...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGGCTCTCCCTCTGGCTaGTCTGCCTATGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSGSPSG*SAYASY
Trigger: ATAAGAAGCATAGGCAGACCAGCCAGAGGGAGAGCC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGAGAGCTAGCAATGCATaGTTAGATCTGTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMRASNA*LDLFCP
Trigger: AGGGCAGAACAGATCTAACCATGCATTGCTAGCTCT...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAAGAGCTAGCAATGCATaGTTAGATCTGTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LPPESQAWTTWVPPQYQERASNA*LDLFCP
Trigger: AGGGCAGAACAGATCTAACCATGCATTGCTAGCTCT...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCCCTGAAGGAGTCAGATaGCTATGCATTGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSPEGVR*LCIAQL
Trigger: GAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGG...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCATACAGGAGGCTGGTGTaGAGGGCTCGGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPYRRLV*RARVTG
Trigger: ACCAGTGACCCGAGCCCTCCACACCAGCCTCCTGTA...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCACCAGCTCACACCCAGTaGGCCCAAAGAGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSPAHTQ*AQRVKG
Trigger: TCCCTTGACTCTTTGGGCCCACTGGGTGTGAGCTGG...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272198.10
3UTR CAA 72 bp ATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATaGAATAGCCCAAGCAGGGCTGCGTCTGAAATGACC +
Preference number: 4 (lower is better)
Translates to: IWHSQTWIDTLR*NSPSRAASEMT
Trigger: GGTCATTTCAGACGCAGCCCTGCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAGCTCAAACAGTGACTTaGGGGCCTTCAGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSAQTVT*GPSAPP
Trigger: TGGAGGTGCTGAAGGCCCTCAAGTCACTGTTTGAGC...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGAGGGGCTGGTCAATaGCACCATCTCCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSRGAGQ*HHLLNG
Trigger: GCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCT...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGACTAACACATCCTTaGTCTCATGCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRRLTHP*SHAGSP
Trigger: AGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCT...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAAGGCCAACAGGTTATTaGACTCTCTTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPRPTGY*TLFPSL
Trigger: AAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCT...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGTGGACGAATATATTCTaGGATCCAGGGCAACCGGAA +
Preference number: 4 (lower is better)
Translates to: KQESGCLHQHWISWTWDMWTNIF*DPGQPE
Trigger: TTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCA...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGTGGACGAATATATTCTaGGATCCAGGGCAACCGGAA +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRWTNIF*DPGQPE
Trigger: TTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCA...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR TCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCAGAACTGCAGTCACGGTaGTGGGTTGGGAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPELQSR*WVGRVV
Trigger: CACCACTCTCCCAACCCATCACCGTGACTGCAGTTC...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCCAAAATAGCCCTGGATaGGGGTTAGGTGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSQNSPG*GLGDLG
Trigger: CCCCAAATCACCTAACCCTCATCCAGGGCTATTTTG...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCTGAACATAAGTCTTaGACATTTTCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPPEHKS*TFSGTL
Trigger: CAAGGTGCCTGAAAATGTTCAAGACTTATGTTCAGG...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCCCATACACCCATTCCTaGTGCACTGAGCAAATACAG +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSPYTHS*CTEQIQ
Trigger: CTGTATTTGCTCAGTGCATCAGGAATGGGTGTATGG...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCGGCACCATAGGCTCCTaGATACTGAATTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSGTIGS*ILNSES
Trigger: AGACTCCGAATTCAGTATGCAGGAGCCTATGGTGCC...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR GCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCCATGGACAACCTGGGTaGCTCCACAATACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSHGQPG*LHNTRK
Trigger: TTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATG...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGAGCTCTCCAACTCCTaGATCAACGTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNELSNS*INVFFS
Trigger: GGAGAAGAACACGTTGATCCAGGAGTTGGAGAGCTC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGGAGCTCTCCAACTCCTaGATCAACGTGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQELSNS*INVFFS
Trigger: GGAGAAGAACACGTTGATCCAGGAGTTGGAGAGCTC...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCTTCCATGCTGCCACTaGTTACACGCGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNLPCCH*LHASQS
Trigger: AGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATATCTCACATTTTATGGTaGCTTTATCCTCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SWADLRNSGRRQSLPTKISHILW*LYPLGS
Trigger: AGAACCGAGAGGATAAAGCCACCATAAAATGTGAGA...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGTCTCACATTTTATGGTaGCTTTATCCTCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: AEGVDEYILRSRATGKSRSHILW*LYPLGS
Trigger: AGAACCGAGAGGATAAAGCCACCATAAAATGTGAGA...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAAAGTCTCACATTTTATaGTGGCTTTATCCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQKSHIL*WLYPLG
Trigger: ACCGAGAGGATAAAGCCACCATAAAATGTGAGACTT...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCAGTGGGGCAGAGGGGCTaGTCAATGACACCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPVGQRG*SMTPSP
Trigger: AGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCAC...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCTGGCACAGCCAGACGTaGATAGACACCCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSWHSQT*IDTLRL
Trigger: CAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCA...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATCCCAAACTCAAATTTaGGATTCAGCTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAEGVDEYILRSRATGKSSQTQI*DSAYAR
Trigger: CCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGA...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATTGCCTTCACCAACATTaGATTTCCTGGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNCLHQH*ISWTWD
Trigger: GTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCA...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGGACAAGCAAGAGAGTaGCTGCCTTCACCAACATTG +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNGQARE*LPSPTL
Trigger: CAATGTTGGTGAAGGCAGCCACTCTCTTGCTTGTCC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATTGCTCCTTCTGGACTaGGTGCCCTGGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSLLLLD*VPWPII
Trigger: GATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTCCTGAAGGAGTCAGATaGCTATGCATTGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLPEGVR*LCIAQL
Trigger: GAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGG...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCCTGAAGGAGTCAGATaGCTATGCATTGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNPEGVR*LCIAQL
Trigger: GAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTGCTGCCTTACGACATaGCCAACAGTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCCCLTT*PTVAGV
Trigger: AACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCA...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTTTCTGCTTTCAGTTCTaGTATCTCTTCCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KSTLKESDGYALPNSTNLFCFQF*YLFLPL
Trigger: GAGCGGGAGGAAGAGATATCAGAACTGAAAGCAGAA...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGACCTGAACATAAGTCTTaGACATTTTCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGPEHKS*TFSGTL
Trigger: CAAGGTGCCTGAAAATGTTCAAGACTTATGTTCAGG...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCCATACACCCATTCCTaGTGCACTGAGCAAATACAG +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNPYTHS*CTEQIQ
Trigger: CTGTATTTGCTCAGTGCATCAGGAATGGGTGTATGG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATTAGGGCTTCCATGCTaGCACTGGTTACACGCGTCT +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSLGLPC*HWLHAS
Trigger: AGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAGGATGGAACCACGCTTaGGCAGCTGCTTCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSGWNHA*AAASGL
Trigger: TAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCC...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCTTGGGATTCAGCTTATaGCAGGGCCTGGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSLGFSL*QGLESL
Trigger: TAGAGATTCCAGGCCCTGGCATAAGCTGAATCCCAA...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTAGGGGACATTCCCACTaGCCTTTGGGCTTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGARGHSH*PLGLRL
Trigger: TAGCCTTAAGCCCAAAGGGCAGTGGGAATGTCCCCT...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTAAGGAGGCCTTAGTCTaGCTTTTCCCCAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAKEALV*LFPKLD
Trigger: GTCAAGTTTGGGGAAAAGGCAGACTAAGGCCTCCTT...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCATCCTTCTGGACTGGGTaGCCTGGCCCATTATCTCAC +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPSFWTG*PGPLSH
Trigger: GTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGA...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACATCCAACTCATTTTCTaGTCAATAATCCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNIQLIF*SIIPPS
Trigger: AGATGGAGGGATTATTGAGCAGAAAATGAGTTGGAT...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCTTCTTAACACCTCCCTaGAACACTTCTCAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSFLTPP*NTSQGA
Trigger: AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAA...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATTCCCATAGCATCAGTTaGTTTTGCTCTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNSHSIS*FCSERG
Trigger: GCCCCTTTCAGAGCAAAAGCAACTGATGCTATGGGA...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTGCATCTTCAAGCAGCTaGTGTTTCTTCTTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAASSSS*CFFFSR
Trigger: GCGGCTAAAGAAGAAACACCAGCTGCTTGAAGATGC...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCGAACCACCTGGTCGTTaGTCCAGACTAACACATCCT +
Preference number: 4 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCEPPGR*SRLTHP
Trigger: AGGATGTGTTAGTCTGGACCAACGACCAGGTGGTTC...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGACCATCCCAGCCTGTaGCCCAGGATCCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGDHPSL*PRILVL
Trigger: CAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAACAACATTGGATTTCCTaGACCTGGGACATGAATCAC +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQQHWIS*TWDMNH
Trigger: GTGATTCATGTCCCAGGTCCAGGAAATCCAATGTTG...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTTCTGGACTGAGTCCCTaGTTAAAATTCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGASGLSP*LKFKPG
Trigger: GCCTGGCTTGAATTTTAACCAGGGACTCAGTCCAGA...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR TCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCAAAATAGCCCTGGATaGGGGTTAGGTGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAQNSPG*GLGDLG
Trigger: CCCCAAATCACCTAACCCTCATCCAGGGCTATTTTG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAAGCTGTCCCTCCAGCTaGCGCAGGTGCTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGSCPSS*RRCSSM
Trigger: CATTGAGGAGCACCTGCGGCAGCTGGAGGGACAGCT...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCATGCAAGCCTAGTCCCTaGTCAGAACTCAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSCKPSP*SELKVI
Trigger: GATCACCTTGAGTTCTGAGCAGGGACTAGGCTTGCA...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCAGATGGCTATGCATTaGCCAACTCCACCAATCTTA +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQQMAMH*PTPPIL
Trigger: TAAGATTGGTGGAGTTGGGCAATGCATAGCCATCTG...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGCACGTCTGCTGCACTaGCCATGTGCGACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGARLLH*PCATLS
Trigger: GCTCAAGGTCGCACATGGGCAGTGCAGCAGACGTGC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272198.10
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCATCCTTGATCTCATGCTaGCTCTCCTCTCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPSLISC*LSSRLF
Trigger: GAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGA...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGACCCCATCCTCACCCTTaGCTCAGAGCTCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGPHPHP*LRAQGS
Trigger: GGATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGG...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGAAGCTATTTTCTTCCTaGGAGGTCAGAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQKLFSS*EVRERR
Trigger: CCTCCTTTCTCTGACCTCCCAGGAAGAAAATAGCTT...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAAACCAGGTTGTTTATTaGTACGTACACACCCACACT +
Preference number: 4 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQNQVVY*YVHTHT
Trigger: AGTGTGGGTGTGTACGTACCAATAAACAACCTGGTT...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCCTTTTCCCCAAACTTaGCTTTGGGCTCAATGTATA +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAPFPQT*LWAQCI
Trigger: TATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGATTGCGCATCGTCTGCTaGAGCTTCTGCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGLRIVC*SFCSAT
Trigger: GGTGGCAGAGCAGAAGCTGCAGCAGACGATGCGCAA...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCACATGGACAACCTGGGTaGCTCCACAATACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPHGQPG*LHNTRK
Trigger: TTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATG...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGGGTCTGAGCCCAGCTaGCCTCCTCACTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGGSEPS*PPHCLF
Trigger: AAACAGACAGTGAGGAGGGCAGCTGGGCTCAGACCC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272198.10
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGGCCACGGAGAGAGCTaGACAAAGGCAAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGGHGES*TKARLP
Trigger: TGGCAACCTTGCCTTTGTCCAGCTCTCTCCGTGGCC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CCA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAAGTCTCACATTTTATaGTGGCTTTATCCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRKSHIL*WLYPLG
Trigger: ACCGAGAGGATAAAGCCACCATAAAATGTGAGACTT...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGACCAGGATCCTGGTCCTaGTGGAGGTTGCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGPGSWS*WRLQCR
Trigger: TCTGCACTGCAACCTCCACCAGGACCAGGATCCTGG...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTTCCCAAACTCAAATTTaGGATTCAGCTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGASQTQI*DSAYAR
Trigger: CCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGA...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCTCCCAAACTCAAATTTaGGATTCAGCTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSSQTQI*DSAYAR
Trigger: CCTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGA...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCAACCAGGTTGTTTATTaGTACGTACACACCCACACT +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSNQVVY*YVHTHT
Trigger: AGTGTGGGTGTGTACGTACCAATAAACAACCTGGTT...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
3UTR CAA 72 bp ATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATaGCCCAACTCCACCAATCTTAGGAATCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: IKSTLKESDGYA*PNSTNLRNLHH
Trigger: ATGATGGAGATTCCTAAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGACCAGCTTCCGGTCTGTaGCCAAGGCCAACAGGTTAT +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGPASGL*PRPTGY
Trigger: ATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGG...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGATTTAAGCCCTGGCACTaGCCAGGTGCCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGFKPWH*PGAIAP
Trigger: AGGAGCAATGGCACCTGGGCAGTGCCAGGGCTTAAA...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTAAGTCTCACATTTTATaGTGGCTTTATCCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: EYILRSRATGKSRTRLGAKSHIL*WLYPLG
Trigger: ACCGAGAGGATAAAGCCACCATAAAATGTGAGACTT...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCATGGATTTCCTGGACCTaGGACATGAATCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPWISWT*DMNHCR
Trigger: CCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCA...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCATCCATTACCCAGGGATaGGAGCTGTTTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPSITQG*ELFISI
Trigger: GATGGAGATAAACAGCTCCCATCCCTGGGTAATGGA...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCACCTTTTCCCCAAACTTaGCTTTGGGCTCAATGTATA +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSPFPQT*LWAQCI
Trigger: TATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGG...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR TCA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCCTGAACATAAGTCTTaGACATTTTCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAPEHKS*TFSGTL
Trigger: CAAGGTGCCTGAAAATGTTCAAGACTTATGTTCAGG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGGATGGAACCACGCTTaGGCAGCTGCTTCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGGWNHA*AAASGL
Trigger: TAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGATGCCAAAACCAGCTaGCAGACCATTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGDAKTS*QTIWHS
Trigger: GCTGTGCCAAATGGTCTGGCAGCTGGTTTTGGCATC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCATCCAACTCATTTTCTaGTCAATAATCCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSIQLIF*SIIPPS
Trigger: AGATGGAGGGATTATTGAGCAGAAAATGAGTTGGAT...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGATGCAAGCCTAGTCCCTaGTCAGAACTCAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGCKPSP*SELKVI
Trigger: GATCACCTTGAGTTCTGAGCAGGGACTAGGCTTGCA...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCAATGCTTCTTATTAGGTaGGAGCTTAGAGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPMLLIR*ELRVSP
Trigger: TGGGGAAACTCTAAGCTCCCACCTAATAAGAAGCAT...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAAGCAGCTTCCTCCTATaGTTTCTTAAGTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGSSFLL*FLKSLG
Trigger: GCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCT...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR GCA 90 bp CCATCACTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAATCCAACTCATTTTCTaGTCAATAATCCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PSLFAQSSLLNTSLQHFSIQLIF*SIIPPS
Trigger: AGATGGAGGGATTATTGAGCAGAAAATGAGTTGGAT...TGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAGTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CCA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGATGGATTTCCTGGACCTaGGACATGAATCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGWISWT*DMNHCR
Trigger: CCTACAGTGATTCATGTCCCAGGTCCAGGAAATCCA...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 90 bp GCCGGGAGGGTCTCCGCGGAAGCGCTGAGCATGCCGCCGCGACCGTaGTGCTCCCGCGGCCGGAAGCGCTTCCTCCAGGAGGGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: AGRVSAEALSMPPRP*CSRGRKRFLQEGAR
Trigger: CCGCGCGCCCTCCTGGAGGAAGCGCTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCCGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS GCA 90 bp GGGAGGGTCTCCGCGGAAGCGCTGAGCATGCCGCCGCGACCGTGGTaGTCCCGCGGCCGGAAGCGCTTCCTCCAGGAGGGCGCGCGGCGA +
Preference number: 5 (lower is better)
Translates to: GRVSAEALSMPPRPW*SRGRKRFLQEGARR
Trigger: TCGCCGCGCGCCCTCCTGGAGGAAGCGCTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS TCA 90 bp GGGTGGACACACGGAAGCCCGCCGGGAGGGTCTCCGCGGAAGCGCTaGGCATGCCGCCGCGACCGTGGTGCTCCCGCGGCCGGAAGCGCT +
Preference number: 5 (lower is better)
Translates to: GWTHGSPPGGSPRKR*ACRRDRGAPAAGSA
Trigger: AGCGCTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCCGGCGGGCTTCCGTGTGTCCACCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 90 bp CACCCGGCCCGGCCCTGGGGTGCCAGGAAGAAGCCCGCGCTCGGCTaGGCCTCGGCCATGCCCAGCCCGCCTGTTACTCACCTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: HPARPWGARKKPALG*ASAMPSPPVTHLQA
Trigger: TGCCTGAAGGTGAGTAACAGGCGGGCTGGGCATGGCCGAGGCCCAGCCGAGCGCGGGCTTCTTCCTGGCACCCCAGGGCCGGGCCGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 90 bp GGCAGCACTGCGGGAGGTGAGCTTAGGTGTGGAGCGGCCGCTGAGTaGTGGGGACGCGCTGGCCAGGGACAGGGCCGTCAGAGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GSTAGGELRCGAAAE*WGRAGQGQGRQRGG
Trigger: CCCACCTCTCTGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCCCGCAGTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 90 bp AGCACTGCGGGAGGTGAGCTTAGGTGTGGAGCGGCCGCTGAGTGGTaGGGACGCGCTGGCCAGGGACAGGGCCGTCAGAGAGGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: STAGGELRCGAAAEW*GRAGQGQGRQRGGD
Trigger: ATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCCCGCAGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 90 bp TCCCACGCACACCCTGCCGTGTGGTCCTGCAGGGCCTGTGCCATGTaGACGTGGCCTCCTGACCTGGGCAGGGTGCTCCGTGACCACCCA +
Preference number: 5 (lower is better)
Translates to: SHAHPAVWSCRACAM*TWPPDLGRVLRDHP
Trigger: TGGGTGGTCACGGAGCACCCTGCCCAGGTCAGGAGGCCACGTCCACATGGCACAGGCCCTGCAGGACCACACGGCAGGGTGTGCGTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS GCA 90 bp ATGCCGAGTAGCGGCGATGCACGCCTGGGGGTGCGTGTGTGGTTGTaGCCAGGGAGAACCGCACGTCTGCTGCACTGCCCATGTGCGACC +
Preference number: 5 (lower is better)
Translates to: MPSSGDARLGVRVWL*PGRTARLLHCPCAT
Trigger: GGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS GCA 90 bp CCAGGTCCTCTGTTGCTTTCCCACGCACACCCTGCCGTGTGGTCCTaGAGGGCCTGTGCCATGTGGACGTGGCCTCCTGACCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PGPLLLSHAHPAVWS*RACAMWTWPPDLGR
Trigger: CCTGCCCAGGTCAGGAGGCCACGTCCACATGGCACAGGCCCTGCAGGACCACACGGCAGGGTGTGCGTGGGAAAGCAACAGAGGACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS-3UTR CAA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCTCAGCTCCTCCGACTaGATGAGGTCCCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGLSSSD*MRSRRA
Trigger: GGCCCGCCGGGACCTCATCAAGTCGGAGGAGCTGAG...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS CCA 90 bp GTGGCAAATTCCTGGGGGAGGGCGGAGTTAAGGTGGCGCTGGAGCTaGTCCCGCTCGTGTATGGCATCCTGGAGCCGGCTCTGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: VANSWGRAELRWRWS*SRSCMASWSRLCVA
Trigger: GGCCACACAGAGCCGGCTCCAGGATGCCATACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTCCGCCCTCCCCCAGGAATTTGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 90 bp GTGGGGACGCGCTGGCCAGGGACAGGGCCGTCAGAGAGGTGGGGATaGAACCACGCTTGCGCAGCTGCTTCAGGTTTAGGGCTTCCATGC +
Preference number: 5 (lower is better)
Translates to: VGTRWPGTGPSERWG*NHACAAASGLGLPC
Trigger: GCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCAGCGCGTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 90 bp ACAGGGTTGGCACCTCCAGGGGAACCCAGTGCATGGGTCTCAGAGTaGGCAGTGCCAGGCGAGTGGACAGGTGGGCAGGGGCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: TGLAPPGEPSAWVSE*AVPGEWTGGQGLLP
Trigger: TGGGAGAAGCCCCTGCCCACCTGTCCACTCGCCTGGCACTGCCCACTCTGAGACCCATGCACTGGGTTCCCCTGGAGGTGCCAACCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS CCA 90 bp AGGGAGGGACTCACAGGGTTGGCACCTCCAGGGGAACCCAGTGCATaGGTCTCAGAGTGGGCAGTGCCAGGCGAGTGGACAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: REGLTGLAPPGEPSA*VSEWAVPGEWTGGQ
Trigger: CTGCCCACCTGTCCACTCGCCTGGCACTGCCCACTCTGAGACCCATGCACTGGGTTCCCCTGGAGGTGCCAACCCTGTGAGTCCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CAA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCAGCTGCAGACGCTCGTaGGACTCGCTGAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGSCRRS*DSLSSR
Trigger: CCGGCTGCTCAGCGAGTCCAACGAGCGTCTGCAGCT...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTTGATGCCCTTGCGCTaGGCGCCCTTGTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGLMPLR*APLCRE
Trigger: CTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGACGACTTGATGCCCTaGCGCTTGGCGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GVRARGACETQKEEASPGDDLMP*RLAPLC
Trigger: GCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCGTC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGACGACTTGATGCCCTaGCGCTTGGCGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGDDLMP*RLAPLC
Trigger: GCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCGTC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGAGCTCCACCCGATGGTaGGGGCAGGGGACATTCCCA +
Preference number: 5 (lower is better)
Translates to: GVRARGACETQKEEASPGSSTRW*GQGTFP
Trigger: TGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGCT...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS GCA 90 bp TGGCACCTCCAGGGGAACCCAGTGCATGGGTCTCAGAGTGGGCAGTaGCAGGCGAGTGGACAGGTGGGCAGGGGCTTCTCCCATAGCATC +
Preference number: 5 (lower is better)
Translates to: WHLQGNPVHGSQSGQ*QASGQVGRGFSHSI
Trigger: GATGCTATGGGAGAAGCCCCTGCCCACCTGTCCACTCGCCTGGCACTGCCCACTCTGAGACCCATGCACTGGGTTCCCCTGGAGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS CCA 90 bp CTTGGCAGACTCTTCCCTCAATGCCGAGTAGCGGCGATGCACGCCTaGGGGTGCGTGTGTGGTTGTGCCCAGGGAGAACCGCACGTCTGC +
Preference number: 5 (lower is better)
Translates to: LGRLFPQCRVAAMHA*GCVCGCAQGEPHVC
Trigger: GCAGACGTGCGGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCTGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGGGCAGCGTCTCTGCCTaGCGCATCGTCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEGSVSA*RIVCCS
Trigger: GCTGCAGCAGACGATGCGCAAGGCAGAGACGCTGCC...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGGGGTGCGTGTGTGGTaGTGCCCAGGGAGAACCGCA +
Preference number: 5 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQGVRVW*CPGRTA
Trigger: TGCGGTTCTCCCTGGGCACAACCACACACGCACCCC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGGGGTGCGTGTGTGGTaGTGCCCAGGGAGAACCGCA +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEGVRVW*CPGRTA
Trigger: TGCGGTTCTCCCTGGGCACAACCACACACGCACCCC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTTGCGCTTGGCGCCCTaGTGCAGGGAGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPELRLAP*CRESWL
Trigger: CAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGTTGCGCTTGGCGCCCTaGTGCAGGGAGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWLRLAP*CRESWL
Trigger: CAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAA...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCATTGCGCTTGGCGCCCTaGTGCAGGGAGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPLRLAP*CRESWL
Trigger: CAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAA...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTTGATGCCCTTGCGCTaGGCGCCCTTGTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGLMPLR*APLCRE
Trigger: CTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAA...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS GCA 90 bp AGACTCTTCCCTCAATGCCGAGTAGCGGCGATGCACGCCTGGGGGTaGGTGTGTGGTTGTGCCCAGGGAGAACCGCACGTCTGCTGCACT +
Preference number: 5 (lower is better)
Translates to: RLFPQCRVAAMHAWG*VCGCAQGEPHVCCT
Trigger: AGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS GCA 90 bp CTCAAGCCCGCTGAGCCCAGGGGAGAGGCTGTGTTACAGAGGACCTaGAGCGTGGCAAAGGAAGCCTGTCTCACTCCGGGACAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LKPAEPRGEAVLQRT*SVAKEACLTPGQGW
Trigger: CCAGCCTTGTCCCGGAGTGAGACAGGCTTCCTTTGCCACGCTGCAGGTCCTCTGTAACACAGCCTCTCCCCTGGGCTCAGCGGGCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 90 bp GGAGCTGGTCCCGCTCGTGTATGGCATCCTGGAGCCGGCTCTGTGTaGCCGCCAAGGTCTCCTGACTCTCCCGAAGAGACTCCAGCAACT +
Preference number: 5 (lower is better)
Translates to: GAGPARVWHPGAGSV*PPRSPDSPEETPAT
Trigger: AGTTGCTGGAGTCTCTTCGGGAGAGTCAGGAGACCTTGGCGGCCACACAGAGCCGGCTCCAGGATGCCATACACGAGCGGGACCAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGTGGACAAAGGCAAGGTaGCCAGCCCCTGCGGAGACC +
Preference number: 5 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWWTKAR*PAPAET
Trigger: GGTCTCCGCAGGGGCTGGCAACCTTGCCTTTGTCCA...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CAA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGCACACATGGTGGGGGTaGGCAGGGCCTTCTCAGCGT +
Preference number: 5 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQHTWWG*AGPSQR
Trigger: ACGCTGAGAAGGCCCTGCCAACCCCCACCATGTGTG...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGGTCATGGATGGATGTaGCCTCACGCTGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGGHGWM*PHAEQP
Trigger: TGGCTGCTCAGCGTGAGGCAACATCCATCCATGACC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGTCAGACAGGCGGCCCTaGTGGTGGTGCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQSDRRP*WWCCSS
Trigger: TGAGGAGCAGCACCACCACAAGGGCCGCCTGTCTGA...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTCAGACAGGCGGCCCTaGTGGTGGTGCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPESDRRP*WWCCSS
Trigger: TGAGGAGCAGCACCACCACAAGGGCCGCCTGTCTGA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGGATGGAACCACGCTaGCGCAGCTGCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: GVRARGACETQKEEASPGGMEPR*RSCFRF
Trigger: AAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCC...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTTGATGCCCTTGCGCTaGGCGCCCTTGTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPELMPLR*APLCRE
Trigger: CTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGACGACTTGATGCCCTaGCGCTTGGCGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPDDLMP*RLAPLC
Trigger: GCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCGTC...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGCGGCCAATGGACGACTaGATGCCCTTGCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEERPMDD*MPLRLA
Trigger: CGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCCG...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGCGCGGCGAAACACCTaGTCATCCCCGTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEARRNT*SSPSSS
Trigger: GCTGGATGACGGGGATGACAAGGTGTTTCGCCGCGC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGGCGCGGCGAAACACCTaGTCATCCCCGTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGARRNT*SSPSSS
Trigger: GCTGGATGACGGGGATGACAAGGTGTTTCGCCGCGC...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGGGCTACCAGAGGCCATaGGCTCTCCCTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQGYQRP*ALPLAG
Trigger: ACCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCC...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGAGCTCCACCCGATGGTaGGGGCAGGGGACATTCCCA +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPESSTRW*GQGTFP
Trigger: TGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGCT...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGGGGCAGGTGGCTGCCTaGCCCAAGCCTAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWGQVAA*PKPKGE
Trigger: CTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCCC...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGGGCAGGTGGCTGCCTaGCCCAAGCCTAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMGQVAA*PKPKGE
Trigger: CTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCCC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS TCA 90 bp TGTATGGCATCCTGGAGCCGGCTCTGTGTGGCCGCCAAGGTCTCCTaGCTCTCCCGAAGAGACTCCAGCAACTTCTCCCGCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: CMASWSRLCVAAKVS*LSRRDSSNFSRSSS
Trigger: GCTGGACGAGCGGGAGAAGTTGCTGGAGTCTCTTCGGGAGAGTCAGGAGACCTTGGCGGCCACACAGAGCCGGCTCCAGGATGCCATACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS TCA 90 bp GACAGGCAGGGACAGCAGGGCTGGAAGATGGCCCTTCTCTTAGACTaGGTGCCGGAGGCTGGCAGAGTCCCAGCTGGATCTAGCGACACC +
Preference number: 5 (lower is better)
Translates to: DRQGQQGWKMALLLD*VPEAGRVPAGSSDT
Trigger: GGTGTCGCTAGATCCAGCTGGGACTCTGCCAGCCTCCGGCACTCAGTCTAAGAGAAGGGCCATCTTCCAGCCCTGCTGTCCCTGCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS CCA 90 bp GTTAAGGTGGCAAATTCCTGGGGGAGGGCGGAGTTAAGGTGGCGCTaGAGCTGGTCCCGCTCGTGTATGGCATCCTGGAGCCGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: VKVANSWGRAELRWR*SWSRSCMASWSRLC
Trigger: ACAGAGCCGGCTCCAGGATGCCATACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTCCGCCCTCCCCCAGGAATTTGCCACCTTAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 90 bp GTGGCCGCTGGGGGAGACAACATCCGCAGAGCCCACCAGACCCCCTaGCTCATCCTCATCCACGTCGGAGATCTCAGGGTCACTGTCAAA +
Preference number: 5 (lower is better)
Translates to: VAAGGDNIRRAHQTP*LILIHVGDLRVTVK
Trigger: TTTGACAGTGACCCTGAGATCTCCGACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGCTCTGCGGATGTTGTCTCCCCCAGCGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
ENST00000600447.1
CDS CCA 90 bp CCGCTGAGCCCAGGGGAGAGGCTGTGTTACAGAGGACCTGCAGCGTaGCAAAGGAAGCCTGTCTCACTCCGGGACAAGGCTGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: PLSPGERLCYRGPAA*QRKPVSLRDKAGFM
Trigger: CATGAAGCCAGCCTTGTCCCGGAGTGAGACAGGCTTCCTTTGCCACGCTGCAGGTCCTCTGTAACACAGCCTCTCCCCTGGGCTCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS-3UTR CAA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGGAGGGACTCACAGGGTaGGCACCTGGACCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: AEGVDEYILRSRATGKSREGLTG*APGPPP
Trigger: GGGAGGGGGTCCAGGTGCCAACCCTGTGAGTCCCTC...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CAA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGCTCAGCTCCTCCGACTaGATGAGGTCCCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: AEGVDEYILRSRATGKSRLSSSD*MRSRRA
Trigger: GGCCCGCCGGGACCTCATCAAGTCGGAGGAGCTGAG...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCCTCAGCTCCTCCGACTaGATGAGGTCCCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: RWELRVSPSSPLAQSSGILSSSD*MRSRRA
Trigger: GGCCCGCCGGGACCTCATCAAGTCGGAGGAGCTGAG...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTGCAGGGACTCCTTGTaGGCCAGCTCATTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RTRLGAAEGRGTSKRGQGCRDSL*ASSFSS
Trigger: GCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGCA...GCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGGGCAGCGTCTCTGCCTaGCGCATCGTCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGGSVSA*RIVCCS
Trigger: GCTGCAGCAGACGATGCGCAAGGCAGAGACGCTGCC...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGGTGTCCGACAGCCGCTaGTTGTGGTCCTCATTCATC +
Preference number: 5 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGVSDSR*LWSSFI
Trigger: GATGAATGAGGACCACAACAAGCGGCTGTCGGACAC...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCAGACAGGCGGCCCTaGTGGTGGTGCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GCKAAAPATCRMALHWPLSDRRP*WWCCSS
Trigger: TGAGGAGCAGCACCACCACAAGGGCCGCCTGTCTGA...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCGGGGTGCGTGTGTGGTaGTGCCCAGGGAGAACCGCA +
Preference number: 5 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGGVRVW*CPGRTA
Trigger: TGCGGTTCTCCCTGGGCACAACCACACACGCACCCC...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGACGACTTGATGCCCTaGCGCTTGGCGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNDDLMP*RLAPLC
Trigger: GCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCGTC...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGATCAGGGCCAGTGTGTaGTGGTCGAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGIRASV*WSKFSS
Trigger: GGACGAGAACTTCGACCACAACACACTGGCCCTGAT...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GGTTGCAAAGCAGCTGCTCCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTAAGCTCCACCCGATGGTaGGGGCAGGGGACATTCCCA +
Preference number: 5 (lower is better)
Translates to: GCKAAAPATCRMALHWPLSSTRW*GQGTFP
Trigger: TGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGCT...TAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGGAGCAGCTGCTTTGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS GCA 90 bp TGGAACCACGCTTGCGCAGCTGCTTCAGGTTTAGGGCTTCCATGCTaGCACTGGTTACACGCGTCTCAATCTCCTCCGCGCGGAGCTCCG +
Preference number: 5 (lower is better)
Translates to: WNHACAAASGLGLPC*HWLHASQSPPRGAP
Trigger: CGGAGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
ENST00000600447.1
CDS GCA 90 bp GACAGGGCCGTCAGAGAGGTGGGGATGGAACCACGCTTGCGCAGCTaGTTCAGGTTTAGGGCTTCCATGCTGCCACTGGTTACACGCGTC +
Preference number: 5 (lower is better)
Translates to: DRAVREVGMEPRLRS*FRFRASMLPLVTRV
Trigger: GACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS GCA 90 bp TGGCCAGGGACAGGGCCGTCAGAGAGGTGGGGATGGAACCACGCTTaGGCAGCTGCTTCAGGTTTAGGGCTTCCATGCTGCCACTGGTTA +
Preference number: 5 (lower is better)
Translates to: WPGTGPSERWGWNHA*AAASGLGLPCCHWL
Trigger: TAACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS GCA 90 bp TGTTGCTGCTGCTGGGGTTGCTGCCCTGATCCTCCAAGGCACTCTTaGCTTCTTCCTGGCTCAGGGCTGGGTGGCCAAGCTTCTCTAGCC +
Preference number: 5 (lower is better)
Translates to: CCCCWGCCPDPPRHS*LLPGSGLGGQASLA
Trigger: GGCTAGAGAAGCTTGGCCACCCAGCCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGATCAGGGCAGCAACCCCAGCAGCAGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS GCA 90 bp GTGCGTGTGTGGTTGTGCCCAGGGAGAACCGCACGTCTGCTGCACTaGCCATGTGCGACCTTGAGCGGTGATGGGGGAGAGAAAAGACAG +
Preference number: 5 (lower is better)
Translates to: VRVWLCPGRTARLLH*PCATLSGDGGEKRQ
Trigger: CTGTCTTTTCTCTCCCCCATCACCGCTCAAGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCACACACGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS CCA 90 bp CACGCTTGCGCAGCTGCTTCAGGTTTAGGGCTTCCATGCTGCCACTaGTTACACGCGTCTCAATCTCCTCCGCGCGGAGCTCCGTGGACT +
Preference number: 5 (lower is better)
Translates to: HACAAASGLGLPCCH*LHASQSPPRGAPWT
Trigger: AGTCCACGGAGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
ENST00000600447.1
CDS-3UTR CAA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGCATTTGCAAGGGGCTTaGCCGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGHLQGA*PGRSVG
Trigger: GCCCACACTCCTCCCCGGCAAAGCCCCTTGCAAATG...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTCACACATGGTGGGGGTaGGCAGGGCCTTCTCAGCGT +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGHTWWG*AGPSQR
Trigger: ACGCTGAGAAGGCCCTGCCAACCCCCACCATGTGTG...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCTTTCTTGGAAGGACCATCCCAGCCTGTGGCCCAGGATCCTGGTCCTGGTGGAGGCGGTCCCCCTCATaGATTGTGGGCATCACCTCA +
Preference number: 5 (lower is better)
Translates to: PFLGRTIPACGPGSWSWWRRSPS*IVGITS
Trigger: TGAGGTGATGCCCACAATCAATGAGGGGGACCGCCT...CCACCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGATCAGCTGCTCGAAGTaGGCGTCAGCATCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMISCSK*ASASAP
Trigger: TGGCGCCGATGCTGACGCCAACTTCGAGCAGCTGAT...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGGGTCATGGATGGATGTaGCCTCACGCTGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQGHGWM*PHAEQP
Trigger: TGGCTGCTCAGCGTGAGGCAACATCCATCCATGACC...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACGGCAGCGTCTCTGCCTaGCGCATCGTCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNGSVSA*RIVCCS
Trigger: GCTGCAGCAGACGATGCGCAAGGCAGAGACGCTGCC...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGGTGGGAGCTTAGAGTTTCCCCATCCTCACCCTTGGCTCAGAGCTCAGGGATCAGCTGCAGACGCTCGTaGGACTCGCTGAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RWELRVSPSSPLAQSSGISCRRS*DSLSSR
Trigger: CCGGCTGCTCAGCGAGTCCAACGAGCGTCTGCAGCT...GATCCCTGAGCTCTGAGCCAAGGGTGAGGATGGGGAAACTCTAAGCTCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCACAGCTGGTCCACCTCTaGGCGCAGCTTCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPQLVHL*AQLLNL
Trigger: GAGATTGAGAAGCTGCGCCAAGAGGTGGACCAGCTG...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAGGGGTGCGTGTGTGGTaGTGCCCAGGGAGAACCGCA +
Preference number: 5 (lower is better)
Translates to: TWVPPQYQETPATSTGLTGVRVW*CPGRTA
Trigger: TGCGGTTCTCCCTGGGCACAACCACACACGCACCCC...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACGGGGTGCGTGTGTGGTaGTGCCCAGGGAGAACCGCA +
Preference number: 5 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHGVRVW*CPGRTA
Trigger: TGCGGTTCTCCCTGGGCACAACCACACACGCACCCC...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGGGGTGCGTGTGTGGTaGTGCCCAGGGAGAACCGCA +
Preference number: 5 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQGVRVW*CPGRTA
Trigger: TGCGGTTCTCCCTGGGCACAACCACACACGCACCCC...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGTCCTCCAAGGCACTCTaGCCTTCTTCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGSSKAL*PSSWLR
Trigger: CCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGA...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTTGATGCCCTTGCGCTaGGCGCCCTTGTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGLMPLR*APLCRE
Trigger: CTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTCGGCCAATGGACGACTaGATGCCCTTGCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGRPMDD*MPLRLA
Trigger: CGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCCG...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTGGTCCTGGTGGAGGTaGCAGTGCAGACCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGWSWWR*QCRPGW
Trigger: CCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAGGCTACCAGAGGCCATaGGCTCTCCCTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQGYQRP*ALPLAG
Trigger: ACCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCC...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAGGGCAGGTGGCTGCCTaGCCCAAGCCTAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: TWVPPQYQETPATSTGLTGQVAA*PKPKGE
Trigger: CTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCCC...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGGAGGGACTCACAGGGTaGGCACCTCCAGGGGAACCC +
Preference number: 5 (lower is better)
Translates to: AEGVDEYILRSRATGKSREGLTG*APPGEP
Trigger: GGGTTCCCCTGGAGGTGCCAACCCTGTGAGTCCCTC...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGCTGTGGTACTCTAAGTaGCAGCAGACCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPELWYSK*QQTPWL
Trigger: GAGCCAGGGGGTCTGCTGCAACTTAGAGTACCACAG...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447715.6
CDS TCA 90 bp GTGCCCTGTGTCCCCAGACATGCAGACAGCAGCCGAATGTGGCCATaGCAGGCAGGGACAGCAGGGCTGGAAGATGGCCCTTCTCTTAGA +
Preference number: 5 (lower is better)
Translates to: VPCVPRHADSSRMWP*QAGTAGLEDGPSLR
Trigger: TCTAAGAGAAGGGCCATCTTCCAGCCCTGCTGTCCCTGCCTGTCATGGCCACATTCGGCTGCTGTCTGCATGTCTGGGGACACAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS GCA 90 bp GGATGGAACCACGCTTGCGCAGCTGCTTCAGGTTTAGGGCTTCCATaGTGCCACTGGTTACACGCGTCTCAATCTCCTCCGCGCGGAGCT +
Preference number: 5 (lower is better)
Translates to: GWNHACAAASGLGLP*CHWLHASQSPPRGA
Trigger: AGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
ENST00000600447.1
CDS GCA 90 bp GAGCTGAGGGAGAGAGAGAGACAGGCATCGCACTGTGAGGCAGGTTaGAGGGCATCTGCGAGAGAGGTTGTAGGATGTGTGCGACAGCGG +
Preference number: 5 (lower is better)
Translates to: ELRERERQASHCEAG*RASAREVVGCVRQR
Trigger: CCGCTGTCGCACACATCCTACAACCTCTCTCGCAGATGCCCTGCAACCTGCCTCACAGTGCGATGCCTGTCTCTCTCTCTCCCTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 90 bp CCCACCCAGAGCTCCAACCAGGAGACCACAGTAGGACCATCCCACTaGGCAAAGGGCATTCCTTTCCTGCGGGCATCTTCAAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PTQSSNQETTVGPSH*AKGIPFLRASSSSW
Trigger: CCAGCTGCTTGAAGATGCCCGCAGGAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTACTGTGGTCTCCTGGTTGGAGCTCTGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGGGTCATGGATGGATGTaGCCTCACGCTGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMGHGWM*PHAEQP
Trigger: TGGCTGCTCAGCGTGAGGCAACATCCATCCATGACC...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGTGCAGGGACTCCTTGTaGGCCAGCTCATTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWCRDSL*ASSFSS
Trigger: GCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGCA...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACGGCAGCGTCTCTGCCTaGCGCATCGTCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SPRIPSMDNLGASTIPGNGSVSA*RIVCCS
Trigger: GCTGCAGCAGACGATGCGCAAGGCAGAGACGCTGCC...GTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTGCCGTTCTTCAGCCTaGGTGAGGGCTGCAATTCTC +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPECRSSA*VRAAIL
Trigger: GAGAATTGCAGCCCTCACCAAGGCTGAAGAACGGCA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGTGCTCCTCAATGTaGCCATGCCGTTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQRCSSM*PCRSSA
Trigger: GGCTGAAGAACGGCATGGCAACATTGAGGAGCACCT...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGTGTCCGACAGCCGCTaGTTGTGGTCCTCATTCATC +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEVSDSR*LWSSFI
Trigger: GATGAATGAGGACCACAACAAGCGGCTGTCGGACAC...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATTCCTCCAAGGCACTCTaGCCTTCTTCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNSSKAL*PSSWLR
Trigger: CCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGA...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCATTGCGCTTGGCGCCCTaGTGCAGGGAGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPLRLAP*CRESWL
Trigger: CAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAA...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACTTGATGCCCTTGCGCTaGGCGCCCTTGTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHLMPLR*APLCRE
Trigger: CTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAA...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGTTGATGCCCTTGCGCTaGGCGCCCTTGTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: AEGVDEYILRSRATGKSRLMPLR*APLCRE
Trigger: CTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAA...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACGACGACTTGATGCCCTaGCGCTTGGCGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNDDLMP*RLAPLC
Trigger: GCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCGTC...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AACCGGAAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAACGGCCAATGGACGACTaGATGCCCTTGCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: NRKVTDETRSCGRKGNEQRPMDD*MPLRLA
Trigger: CGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCCG...TTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTTCCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGCGGCCAATGGACGACTaGATGCCCTTGCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: AEGVDEYILRSRATGKSRRPMDD*MPLRLA
Trigger: CGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCCG...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGCAGACTAACACATCCTaGATCTCATGCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GVRARGACETQKEEASPGQTNTS*ISCWLS
Trigger: GGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTG...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGATCAGGGCCAGTGTGTaGTGGTCGAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQIRASV*WSKFSS
Trigger: GGACGAGAACTTCGACCACAACACACTGGCCCTGAT...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGATCAGGGCCAGTGTGTaGTGGTCGAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGIRASV*WSKFSS
Trigger: GGACGAGAACTTCGACCACAACACACTGGCCCTGAT...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCTCTCTTTCCATCACTaGGCGTGCCTGGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGLSFHH*ACLGVL
Trigger: CAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAG...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACGCGCGGCGAAACACCTaGTCATCCCCGTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHARRNT*SSPSSS
Trigger: GCTGGATGACGGGGATGACAAGGTGTTTCGCCGCGC...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCGCGCGGCGAAACACCTaGTCATCCCCGTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVARRNT*SSPSSS
Trigger: GCTGGATGACGGGGATGACAAGGTGTTTCGCCGCGC...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATAGGCTACCAGAGGCCATaGGCTCTCCCTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIGYQRP*ALPLAG
Trigger: ACCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCC...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAGGGCAGGTGGCTGCCTaGCCCAAGCCTAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEGQVAA*PKPKGE
Trigger: CTCTCCCTTAGGCTTGGGCAAGGCAGCCACCTGCCC...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATATGCCCATGTGCGACCTaGAGCGGTGATGGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SWADLRNSGRRQSLPTKICPCAT*SGDGGE
Trigger: CTCTCCCCCATCACCGCTCAAGGTCGCACATGGGCA...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272198.10
CDS TCA 90 bp CCGTGCCCAGGTCCTCCTCGAGTTCAGTCACGGTTGTTGTTAGGGTaGCCAGTCGCTCCCGGGCCTGGCTCAACTCAAAGTTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PCPGPPRVQSRLLLG*PVAPGPGSTQSSAS
Trigger: AGAAGCAGAACTTTGAGTTGAGCCAGGCCCGGGAGCGACTGGTCACCCTAACAACAACCGTGACTGAACTCGAGGAGGACCTGGGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS GCA 90 bp CAGGGCCAGCAAGGCTCCATGCACACCACTCTCATGCAGGTTTCCTaGGTAGTCCCGGAGCCCAATAGACTGGACCCAATGAACCACCTG +
Preference number: 5 (lower is better)
Translates to: QGQQGSMHTTLMQVS*VVPEPNRLDPMNHL
Trigger: CAGGTGGTTCATTGGGTCCAGTCTATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000597023.1
ENST00000599966.5
ENST00000600426.5
CDS GCA 90 bp GCAGGGCCTGTGCCATGTGGACGTGGCCTCCTGACCTGGGCAGGGTaGTCCGTGACCACCCAACTTGAGAAAGCTTTAGTTTTCATAGCG +
Preference number: 5 (lower is better)
Translates to: AGPVPCGRGLLTWAG*SVTTQLEKALVFIA
Trigger: CGCTATGAAAACTAAAGCTTTCTCAAGTTGGGTGGTCACGGAGCACCCTGCCCAGGTCAGGAGGCCACGTCCACATGGCACAGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS-3UTR CAA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGAGGCGGTCCCCCTCATaGATTGTGGGCATCACCTCA +
Preference number: 5 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWRRSPS*IVGITS
Trigger: TGAGGTGATGCCCACAATCAATGAGGGGGACCGCCT...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCTGCAGGGACTCCTTGTaGGCCAGCTCATTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGCRDSL*ASSFSS
Trigger: GCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGCA...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTGGGATGGAACCACGCTaGCGCAGCTGCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGGMEPR*RSCFRF
Trigger: AAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCC...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTTCCTCCAAGGCACTCTaGCCTTCTTCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGSSKAL*PSSWLR
Trigger: CCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGA...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTGACGACTTGATGCCCTaGCGCTTGGCGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSDDLMP*RLAPLC
Trigger: GCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCGTC...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATCTCTCTTTCCATCACTaGGCGTGCCTGGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNLSFHH*ACLGVL
Trigger: CAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAG...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCATGGTCCTGGTGGAGGTaGCAGTGCAGACCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPWSWWR*QCRPGW
Trigger: CCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCA...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAAGCTCCACCCGATGGTaGGGGCAGGGGACATTCCCA +
Preference number: 5 (lower is better)
Translates to: GAEGVDEYILRSRATGKSSSTRW*GQGTFP
Trigger: TGGGAATGTCCCCTGCCCCAACCATCGGGTGGAGCT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGTCAGATGGCTATGCATaGCCCAACTCCACCAATCTT +
Preference number: 5 (lower is better)
Translates to: GVRARGACETQKEEASPGSDGYA*PNSTNL
Trigger: AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGA...CCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCATGCCCATGTGCGACCTaGAGCGGTGATGGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPCPCAT*SGDGGE
Trigger: CTCTCCCCCATCACCGCTCAAGGTCGCACATGGGCA...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS TCA 90 bp TGCATTTGCGGTATTGTGCAGCAGACGTGCCTTCCTGACTCTCAGTaGGCCTCAAGCCCGCTGAGCCCAGGGGAGAGGCTGTGTTACAGA +
Preference number: 5 (lower is better)
Translates to: CICGIVQQTCLPDSQ*ASSPLSPGERLCYR
Trigger: TCTGTAACACAGCCTCTCCCCTGGGCTCAGCGGGCTTGAGGCTCACTGAGAGTCAGGAAGGCACGTCTGCTGCACAATACCGCAAATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS GCA 90 bp ATCTCTTCAGACAGGCGGCCCTTGTGGTGGTGCTGCTCCTCAATCTaGCGCTGGGAGCTCTCCAACTCCTGGATCAACGTGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ISSDRRPLWWCCSSI*RWELSNSWINVFFS
Trigger: GGAGAAGAACACGTTGATCCAGGAGTTGGAGAGCTCCCAGCGGCAGATTGAGGAGCAGCACCACCACAAGGGCCGCCTGTCTGAAGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000447715.6
ENST00000600426.5
CDS GCA 90 bp CACCTGTCTCACATCCAGCATCAGCCACAGCATGTCCAGACCTACTaGCTCCAGCACAAAGAGCACCCCAGCCTCCTCATGCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: HLSHIQHQPQHVQTY*LQHKEHPSLLMLLL
Trigger: AAGGAGGAGCATGAGGAGGCTGGGGTGCTCTTTGTGCTGGAGGCAGTAGGTCTGGACATGCTGTGGCTGATGCTGGATGTGAGACAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597023.1
CDS CCA 90 bp GGGCAAATGTGTGTGTGGCAAAAACACACACCTCCCAGGCTTGACTaGGAGCCAGGCAAGATGCCCAGCTCTCCCAACACTCCCCATTCC +
Preference number: 5 (lower is better)
Translates to: GQMCVWQKHTPPRLD*EPGKMPSSPNTPHS
Trigger: GGAATGGGGAGTGTTGGGAGAGCTGGGCATCTTGCCTGGCTCCCAGTCAAGCCTGGGAGGTGTGTGTTTTTGCCACACACACATTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS-3UTR CAA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAATCAGCTGCTCGAAGTaGGCGTCAGCATCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEISCSK*ASASAP
Trigger: TGGCGCCGATGCTGACGCCAACTTCGAGCAGCTGAT...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTATCAGCTGCTCGAAGTaGGCGTCAGCATCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSISCSK*ASASAP
Trigger: TGGCGCCGATGCTGACGCCAACTTCGAGCAGCTGAT...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTCAGCTCCTCCGACTaGATGAGGTCCCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQLSSSD*MRSRRA
Trigger: GGCCCGCCGGGACCTCATCAAGTCGGAGGAGCTGAG...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGGTCAGGGCCAGAGGAGCCTGTGAAACCCAGAAGGAGGAAGCCAGCCCTGGGGTTCTCCAGCTTGTCATaGAGGTCATGGATGGATGTT +
Preference number: 5 (lower is better)
Translates to: GSGPEEPVKPRRRKPALGFSSLS*RSWMDV
Trigger: AACATCCATCCATGACCTCAATGACAAGCTGGAGAA...CCCCAGGGCTGGCTTCCTCCTTCTGGGTTTCACAGGCTCCTCTGGCCCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp ATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACTGCAGGGACTCCTTGTaGGCCAGCTCATTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: IPSMDNLGASTIPGNPSHCRDSL*ASSFSS
Trigger: GCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGCA...GTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAATGCCGTTCTTCAGCCTaGGTGAGGGCTGCAATTCTC +
Preference number: 5 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQCRSSA*VRAAIL
Trigger: GAGAATTGCAGCCCTCACCAAGGCTGAAGAACGGCA...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACCAGGTTGTTTATTGGTACGTACACACCCACACTCACACCCACCCACACACACAGCTGCAGACGCTCGTaGGACTCGCTGAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: TRLFIGTYTPTLTPTHTHSCRRS*DSLSSR
Trigger: CCGGCTGCTCAGCGAGTCCAACGAGCGTCTGCAGCT...GTGTGTGTGGGTGGGTGTGAGTGTGGGTGTGTACGTACCAATAAACAACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGTTGCGCTTGGCGCCCTaGTGCAGGGAGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: KQESGCLHQHWISWTWDMLRLAP*CRESWL
Trigger: CAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAA...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATTGCGCTTGGCGCCCTaGTGCAGGGAGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQLRLAP*CRESWL
Trigger: CAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTCATTCCCACTGCCCTTaGGGCTTAAGGCTACCAGAG +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGHSHCP*GLRLPE
Trigger: CTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAATG...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS TCA 90 bp CCCCGTCATCCAGCTTCCGGTCTGTGCCCAAGGCCAACAGGTTATTaGACTCTCTTTCCATCACTTGGCGTGCCTGGGTGTTCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: PRHPASGLCPRPTGY*TLFPSLGVPGCSVW
Trigger: CCACACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGGATGACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS TCA 90 bp GGTGGCCTGTGCCTGAATAGCCAGCAGCACTCATTCTCTAAGGCCTaGGCCTCTGCTCCAAGAACACTCCAGGTCCTCTGTTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: GGLCLNSQQHSFSKA*ASAPRTLQVLCCFP
Trigger: GGGAAAGCAACAGAGGACCTGGAGTGTTCTTGGAGCAGAGGCTCAGGCCTTAGAGAATGAGTGCTGCTGGCTATTCAGGCACAGGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS GCA 90 bp TCCTTCTCTGCCTGGGTCCCCAGCTTGGCAGGCACCATAGGCTCCTaGATACTGAATTCGGAGTCTGTTAGCAGAACATGGCCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: SFSAWVPSLAGTIGS*ILNSESVSRTWPVA
Trigger: AGCCACAGGCCATGTTCTGCTAACAGACTCCGAATTCAGTATGCAGGAGCCTATGGTGCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS CCA 90 bp TCAAGCAGCTGGTGTTTCTTCTTTAGCCGCCGGTCCTTCTCTGCCTaGGTCCCCAGCTTGGCAGGCACCATAGGCTCCTGCATACTGAAT +
Preference number: 5 (lower is better)
Translates to: SSSWCFFFSRRSFSA*VPSLAGTIGSCILN
Trigger: ATTCAGTATGCAGGAGCCTATGGTGCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGACCGGCGGCTAAAGAAGAAACACCAGCTGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS-3UTR CAA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGCACACATGGTGGGGGTaGGCAGGGCCTTCTCAGCGT +
Preference number: 5 (lower is better)
Translates to: KQESGCLHQHWISWTWDMHTWWG*AGPSQR
Trigger: ACGCTGAGAAGGCCCTGCCAACCCCCACCATGTGTG...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAAGGCGGTCCCCCTCATaGATTGTGGGCATCACCTCA +
Preference number: 5 (lower is better)
Translates to: GAEGVDEYILRSRATGKSRRSPS*IVGITS
Trigger: TGAGGTGATGCCCACAATCAATGAGGGGGACCGCCT...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAGCTCATTCTCCAGCTaGTCATTGAGGTCATGGATG +
Preference number: 5 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEESSFSS*SLRSWM
Trigger: CATCCATGACCTCAATGACAAGCTGGAGAATGAGCT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS-3UTR CAA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTAAGGTGCTCCTCAATGTaGCCATGCCGTTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLRCSSM*PCRSSA
Trigger: GGCTGAAGAACGGCATGGCAACATTGAGGAGCACCT...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAACAGCTGGTCCACCTCTaGGCGCAGCTTCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEQLVHL*AQLLNL
Trigger: GAGATTGAGAAGCTGCGCCAAGAGGTGGACCAGCTG...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCAGGGATGGAACCACGCTaGCGCAGCTGCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPGMEPR*RSCFRF
Trigger: AAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCC...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACTCTCTTTCCATCACTaGGCGTGCCTGGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLLSFHH*ACLGVL
Trigger: CAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAG...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCGCGCGGCGAAACACCTaGTCATCCCCGTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSARRNT*SSPSSS
Trigger: GCTGGATGACGGGGATGACAAGGTGTTTCGCCGCGC...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGATAGACACCCTAAGATaGAATAGCCCAAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEEIDTLR*NSPSRA
Trigger: AGCCCTGCTTGGGCTATTCAATCTTAGGGTGTCTAT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAGGCTACCAGAGGCCATaGGCTCTCCCTCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQGYQRP*ALPLAG
Trigger: ACCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCC...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACAACCATTCCCACTGCCCTTaGGGCTTAAGGCTACCAGAG +
Preference number: 5 (lower is better)
Translates to: LGASTIPGNPSHIHRTYNHSHCP*GLRLPE
Trigger: CTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAATG...GTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTCTGCCTTCACCAACATaGGATTTCCTGGACCTGGGA +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGLPSPT*DFLDLG
Trigger: TCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAG...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTCAGATGGCTATGCATaGCCCAACTCCACCAATCTT +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPESDGYA*PNSTNL
Trigger: AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS GCA 90 bp CACAAATGTCTGAAGGGCTGCCGTGTAAGCAAGAGAGCAGACGTATaGCCTGGTGCTCCAGGGGTCAGAATGAGCCAGGGGAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: HKCLKGCRVSKRADV*PGAPGVRMSQGRKF
Trigger: GAACTTTCTCCCCTGGCTCATTCTGACCCCTGGAGCACCAGGGCATACGTCTGCTCTCTTGCTTACACGGCAGCCCTTCAGACATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CAA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGTGGACAAAGGCAAGGTaGCCAGCCCCTGCGGAGACC +
Preference number: 5 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQWTKAR*PAPAET
Trigger: GGTCTCCGCAGGGGCTGGCAACCTTGCCTTTGTCCA...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATGAGCTCATTCTCCAGCTaGTCATTGAGGTCATGGATG +
Preference number: 5 (lower is better)
Translates to: PSHIHRTYNGHTVGLGVMSSFSS*SLRSWM
Trigger: CATCCATGACCTCAATGACAAGCTGGAGAATGAGCT...CATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCATGCCGTTCTTCAGCCTaGGTGAGGGCTGCAATTCTC +
Preference number: 5 (lower is better)
Translates to: GAEGVDEYILRSRATGKSCRSSA*VRAAIL
Trigger: GAGAATTGCAGCCCTCACCAAGGCTGAAGAACGGCA...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCCGGCCAATGGACGACTaGATGCCCTTGCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSRPMDD*MPLRLA
Trigger: CGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCCG...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGCAGACTAACACATCCTaGATCTCATGCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGQTNTS*ISCWLS
Trigger: GGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTG...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAACAGACTAACACATCCTaGATCTCATGCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQQTNTS*ISCWLS
Trigger: GGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTG...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGCTCTCTTTCCATCACTaGGCGTGCCTGGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: EGVDEYILRSRATGKSRTLSFHH*ACLGVL
Trigger: CAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAG...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp TCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGTGGTCCTGGTGGAGGTaGCAGTGCAGACCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SLLNTSLQHFSRCSEWTQWSWWR*QCRPGW
Trigger: CCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCA...CTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCATTCCCACTGCCCTTaGGGCTTAAGGCTACCAGAG +
Preference number: 5 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSHSHCP*GLRLPE
Trigger: CTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAATG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGCCTGTATCCCTCAGCTaGGGTTCCCATCATGCTGCT +
Preference number: 5 (lower is better)
Translates to: EGVDEYILRSRATGKSRTPVSLS*GSHHAA
Trigger: AGCAGCATGATGGGAACCCAAGCTGAGGGATACAGG...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCTGTATCCCTCAGCTaGGGTTCCCATCATGCTGCT +
Preference number: 5 (lower is better)
Translates to: KHGQPGCLHNTRKPQPHPPVSLS*GSHHAA
Trigger: AGCAGCATGATGGGAACCCAAGCTGAGGGATACAGG...TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCCTGTATCCCTCAGCTaGGGTTCCCATCATGCTGCT +
Preference number: 5 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSPVSLS*GSHHAA
Trigger: AGCAGCATGATGGGAACCCAAGCTGAGGGATACAGG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTCTCAAGGTGATCAGGTaGCAAAGCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSLKVIR*QSSCSS
Trigger: GCTGGAGCAGCTGCTTTGCAACCTGATCACCTTGAG...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAGATGCTCAAGGTGATCAGGTaGCAAAGCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PPVGWHCTGPYPRNTCQMLKVIR*QSSCSS
Trigger: GCTGGAGCAGCTGCTTTGCAACCTGATCACCTTGAG...CATCTGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGTCAGATGGCTATGCATaGCCCAACTCCACCAATCTT +
Preference number: 5 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWSDGYA*PNSTNL
Trigger: AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGA...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGTAATTCAGATGGCTATGCATaGCCCAACTCCACCAATCTT +
Preference number: 5 (lower is better)
Translates to: PQPHPPDLQRTHGGTRGNSDGYA*PNSTNL
Trigger: AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGA...ATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGAAACCCCAGCCACATCCACCGGACTTACAACGGACACACGGTGGGACTCGGGGCCTTCCATCACTGTTaGCACAGAGTTCTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: GNPSHIHRTYNGHTVGLGAFHHC*HRVLFL
Trigger: TAAGAAGAGAACTCTGTGCAAACAGTGATGGAAGGC...CCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAAAACCAGGTTGTTTATaGGTACGTACACACCCACAC +
Preference number: 5 (lower is better)
Translates to: DETRSCGRKGNEQEGSGPKPGCL*VRTHPH
Trigger: GTGTGGGTGTGTACGTACCAATAAACAACCTGGTTT...TGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGGAGGGTCTTTGTTTTTaGGTCTTCTACCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: TRLGAAEGRGTSKRGQGQEGLCF*VFYPAL
Trigger: AAGTGCTGGGTAGAAGACCAAAAAACAAAGACCCTC...CTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS TCA 90 bp ACGTGGCCTCCTGACCTGGGCAGGGTGCTCCGTGACCACCCAACTTaGGAAAGCTTTAGTTTTCATAGCGACCCTACCTCACTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: TWPPDLGRVLRDHPT*ESFSFHSDPTSLFP
Trigger: AGGAAAGAGTGAGGTAGGGTCGCTATGAAAACTAAAGCTTTCTCAAGTTGGGTGGTCACGGAGCACCCTGCCCAGGTCAGGAGGCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS-3UTR CAA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAGGTCATGGATGGATGTaGCCTCACGCTGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQGHGWM*PHAEQP
Trigger: TGGCTGCTCAGCGTGAGGCAACATCCATCCATGACC...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGAGCTCATTCTCCAGCTaGTCATTGAGGTCATGGATG +
Preference number: 5 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGSSFSS*SLRSWM
Trigger: CATCCATGACCTCAATGACAAGCTGGAGAATGAGCT...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGGGCGGATCTTAGGAATTCCGGGAGGAGGCAGTCCCTGCCCACCAAAATACAGACTAACACATCCTaGATCTCATGCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SWADLRNSGRRQSLPTKIQTNTS*ISCWLS
Trigger: GGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTG...TATTTTGGTGGGCAGGGACTGCCTCCTCCCGGAATTCCTAAGATCCGCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACACAGACTAACACATCCTaGATCTCATGCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: TWVPPQYQETPATSTGLTQTNTS*ISCWLS
Trigger: GGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTG...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCCAGACTAACACATCCTaGATCTCATGCTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVQTNTS*ISCWLS
Trigger: GGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTG...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp CTGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTGGTCCTGGTGGAGGTaGCAGTGCAGACCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFAQSSLLNTSLQHFSRCWSWWR*QCRPGW
Trigger: CCAGCCTGGTCTGCACTGCAACCTCCACCAGGACCA...GCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCCAAGAGAATGGGGGCAGGAACTGCAGTCACGGTGATGGGTTGGGAGAGTGGTATAGACACCCTAAGATaGAATAGCCCAAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PKRMGAGTAVTVMGWESGIDTLR*NSPSRA
Trigger: AGCCCTGCTTGGGCTATTCAATCTTAGGGTGTCTAT...ACCACTCTCCCAACCCATCACCGTGACTGCAGTTCCTGCCCCCATTCTCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GGCCTCTCCTCTACCGAAAAGGAGCAGCGGGCTTTAAGCCCTGGCACTGCCCAGTTCCCAAACTCAAATTaGGGATTCAGCTTATGCCAG +
Preference number: 5 (lower is better)
Translates to: GLSSTEKEQRALSPGTAQFPNSN*GFSLCQ
Trigger: CTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGAA...CTGGGCAGTGCCAGGGCTTAAAGCCCGCTGCTCCTTTTCGGTAGAGGAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTTCCCAAACTCAAATTaGGGATTCAGCTTATGCCAG +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPEFPNSN*GFSLCQ
Trigger: CTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGAA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACTGCCTTCACCAACATaGGATTTCCTGGACCTGGGA +
Preference number: 5 (lower is better)
Translates to: GAEGVDEYILRSRATGKSLPSPT*DFLDLG
Trigger: TCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAG...TGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAACTGCCTTCACCAACATaGGATTTCCTGGACCTGGGA +
Preference number: 5 (lower is better)
Translates to: LPPESQAWTTWVPPQYQELPSPT*DFLDLG
Trigger: TCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAG...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGGAGAGGAGCGGGTATTTCTaGGGAATAATATTCCTACCA +
Preference number: 5 (lower is better)
Translates to: TRSCGRKGNEQEGSGPEERSGYF*GIIFLP
Trigger: TGGTAGGAATATTATTCCCAAGAAATACCCGCTCCT...CTCCTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGACTCAAGGTGATCAGGTaGCAAAGCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGLKVIR*QSSCSS
Trigger: GCTGGAGCAGCTGCTTTGCAACCTGATCACCTTGAG...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGAAACCAGGTTGTTTATaGGTACGTACACACCCACAC +
Preference number: 5 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWKPGCL*VRTHPH
Trigger: GTGTGGGTGTGTACGTACCAATAAACAACCTGGTTT...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGAGGCACTGGGAGATGTaGGAAGGGATGATGTCTAGA +
Preference number: 5 (lower is better)
Translates to: AEGVDEYILRSRATGKSRRHWEM*EGMMSR
Trigger: TCTAGACATCATCCCTTCCAACATCTCCCAGTGCCT...CCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS-3UTR CAA 90 bp GGGTGCCGAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCAGGCACTGGGAGATGTaGGAAGGGATGATGTCTAGA +
Preference number: 5 (lower is better)
Translates to: GCRGGGRIYSEIQGNRKVRHWEM*EGMMSR
Trigger: TCTAGACATCATCCCTTCCAACATCTCCCAGTGCCT...GACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTCGGCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS CCA 90 bp ACCTGCAGCGTGGCAAAGGAAGCCTGTCTCACTCCGGGACAAGGCTaGCTTCATGGAGGAAGCAAGGAAGTTAAATGTTGGCAGAAGACT +
Preference number: 5 (lower is better)
Translates to: TCSVAKEACLTPGQG*LHGGSKEVKCWQKT
Trigger: AGTCTTCTGCCAACATTTAACTTCCTTGCTTCCTCCATGAAGCCAGCCTTGTCCCGGAGTGAGACAGGCTTCCTTTGCCACGCTGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 90 bp GACATCCCAGTATCTGGCTGGGTGACTGGGGAAAGCTCGTCAGGATaGTTAAGAGAGAACACAAGGTTGGTGTGTGCACCCATGTTTGCG +
Preference number: 5 (lower is better)
Translates to: DIPVSGWVTGESSSG*LRENTRLVCAPMFA
Trigger: CGCAAACATGGGTGCACACACCAACCTTGTGTTCTCTCTTAACCATCCTGACGAGCTTTCCCCAGTCACCCAGCCAGATACTGGGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS-3UTR CAA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCATTTGCAAGGGGCTTaGCCGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAHLQGA*PGRSVG
Trigger: GCCCACACTCCTCCCCGGCAAAGCCCCTTGCAAATG...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGCTGCCTTACGACATGGCCAACAGTGGCAGGAGTTGTAGAGGGGAGAGGCTTCTCCAGCTTGTCATaGAGGTCATGGATGGATGTT +
Preference number: 5 (lower is better)
Translates to: SCCLTTWPTVAGVVEGRGFSSLS*RSWMDV
Trigger: AACATCCATCCATGACCTCAATGACAAGCTGGAGAA...GCCTCTCCCCTCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGTGCCGTTCTTCAGCCTaGGTGAGGGCTGCAATTCTC +
Preference number: 5 (lower is better)
Translates to: KQESGCLHQHWISWTWDMCRSSA*VRAAIL
Trigger: GAGAATTGCAGCCCTCACCAAGGCTGAAGAACGGCA...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CTTAACACCTCCCTGCAACACTTCTCAAGGTGCTCTGAATGGACCCAGCTATCCAGGTGCTCCTCAATGTaGCCATGCCGTTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LNTSLQHFSRCSEWTQLSRCSSM*PCRSSA
Trigger: GGCTGAAGAACGGCATGGCAACATTGAGGAGCACCT...GGATAGCTGGGTCCATTCAGAGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTCAGCTGGTCCACCTCTaGGCGCAGCTTCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: EYILRSRATGKSRTRLGAQLVHL*AQLLNL
Trigger: GAGATTGAGAAGCTGCGCCAAGAGGTGGACCAGCTG...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATGGGATGGAACCACGCTaGCGCAGCTGCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNGMEPR*RSCFRF
Trigger: AAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCC...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTGGGATGGAACCACGCTaGCGCAGCTGCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: KSTLKESDGYALPNSTNLGMEPR*RSCFRF
Trigger: AAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCC...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTTCCTCCAAGGCACTCTaGCCTTCTTCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: EYILRSRATGKSRTRLGASSKAL*PSSWLR
Trigger: CCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGA...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCTTTCCTCCAAGGCACTCTaGCCTTCTTCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: KSTLKESDGYALPNSTNLSSKAL*PSSWLR
Trigger: CCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGA...AAGATTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAAATCAGGGCCAGTGTGTaGTGGTCGAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQIRASV*WSKFSS
Trigger: GGACGAGAACTTCGACCACAACACACTGGCCCTGAT...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGATCAGGGCCAGTGTGTaGTGGTCGAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRIRASV*WSKFSS
Trigger: GGACGAGAACTTCGACCACAACACACTGGCCCTGAT...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGCATTCCCACTGCCCTTaGGGCTTAAGGCTACCAGAG +
Preference number: 5 (lower is better)
Translates to: KQESGCLHQHWISWTWDMHSHCP*GLRLPE
Trigger: CTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAATG...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGTCCCCAAACTTGACTTaGGGCTCAATGTATATTCAA +
Preference number: 5 (lower is better)
Translates to: TDETRSCGRKGNEQEGSGSPNLT*GSMYIQ
Trigger: TTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGA...CCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGTCAGGGCCAGAGTCCCCAAACTTGACTTaGGGCTCAATGTATATTCAA +
Preference number: 5 (lower is better)
Translates to: ETRSCGRKGNEQEGSGPESPNLT*GSMYIQ
Trigger: TTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGA...CTCTGGCCCTGACCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGCTGGAGGAGCGGGTATTTCTaGGGAATAATATTCCTACCA +
Preference number: 5 (lower is better)
Translates to: HCPLGLRLPEAIGSPSGWRSGYF*GIIFLP
Trigger: TGGTAGGAATATTATTCCCAAGAAATACCCGCTCCT...CCAGCCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AAGCAAGAGAGTGGCTGCCTTCACCAACATTGGATTTCCTGGACCTGGGACATGCTCAAGGTGATCAGGTaGCAAAGCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: KQESGCLHQHWISWTWDMLKVIR*QSSCSS
Trigger: GCTGGAGCAGCTGCTTTGCAACCTGATCACCTTGAG...CATGTCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAGCCACTCTCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TCCACTCCCAGCAACCTGATGGCAGGGAGGCCAGGGAACACTAAGGGAGAGCAAGCCTTCCATCACTGTTaGCACAGAGTTCTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: STPSNLMAGRPGNTKGEQAFHHC*HRVLFL
Trigger: TAAGAAGAGAACTCTGTGCAAACAGTGATGGAAGGC...TTGCTCTCCCTTAGTGTTCCCTGGCCTCCCTGCCATCAGGTTGCTGGGAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AAAGTCACGGACGAGACTAGGAGCTGCGGAAGGAAGGGGAACGAGCAAGAGGGGAAACCAGGTTGTTTATaGGTACGTACACACCCACAC +
Preference number: 5 (lower is better)
Translates to: KVTDETRSCGRKGNEQEGKPGCL*VRTHPH
Trigger: GTGTGGGTGTGTACGTACCAATAAACAACCTGGTTT...CCCCTCTTGCTCGTTCCCCTTCCTTCCGCAGCTCCTAGTCTCGTCCGTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 90 bp AGAGAGAACACAAGGTTGGTGTGTGCACCCATGTTTGCGTTGAGGTaGGGCAAATGTGTGTGTGGCAAAAACACACACCTCCCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: RENTRLVCAPMFALR*GKCVCGKNTHLPGL
Trigger: CAAGCCTGGGAGGTGTGTGTTTTTGCCACACACACATTTGCCCCACCTCAACGCAAACATGGGTGCACACACCAACCTTGTGTTCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS-3UTR CAA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGGTGCTCCTCAATGTaGCCATGCCGTTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNRCSSM*PCRSSA
Trigger: GGCTGAAGAACGGCATGGCAACATTGAGGAGCACCT...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTGTGTCCGACAGCCGCTaGTTGTGGTCCTCATTCATC +
Preference number: 5 (lower is better)
Translates to: EYILRSRATGKSRTRLGAVSDSR*LWSSFI
Trigger: GATGAATGAGGACCACAACAAGCGGCTGTCGGACAC...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATCTCTCTTTCCATCACTaGGCGTGCCTGGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNLSFHH*ACLGVL
Trigger: CAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAG...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp TTCCCACTGCCCTTTGGGCTTAAGGCTACCAGAGGCCATTGGCTCTCCCTCTGGTTCCCAAACTCAAATTaGGGATTCAGCTTATGCCAG +
Preference number: 5 (lower is better)
Translates to: FPLPFGLKATRGHWLSLWFPNSN*GFSLCQ
Trigger: CTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGAA...CCAGAGGGAGAGCCAATGGCCTCTGGTAGCCTTAAGCCCAAAGGGCAGTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CCAGCCACCTGTAGGATGGCACTGCACTGGCCCCTATCCAAGAAACACATGCCAAAACCAGGTTGTTTATaGGTACGTACACACCCACAC +
Preference number: 5 (lower is better)
Translates to: PATCRMALHWPLSKKHMPKPGCL*VRTHPH
Trigger: GTGTGGGTGTGTACGTACCAATAAACAACCTGGTTT...TGGCATGTGTTTCTTGGATAGGGGCCAGTGCAGTGCCATCCTACAGGTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAAAGGCAGGGCCAGCTaGGCAGACTCTTCCCTCAAT +
Preference number: 5 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNKGRAS*ADSSLN
Trigger: ATTGAGGGAAGAGTCTGCCAAGCTGGCCCTGCCTTT...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447715.6
CDS GCA 90 bp GGAAAGCTCGTCAGGATGGTTAAGAGAGAACACAAGGTTGGTGTGTaGACCCATGTTTGCGTTGAGGTGGGGCAAATGTGTGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: GKLVRMVKREHKVGV*THVCVEVGQMCVWQ
Trigger: TTGCCACACACACATTTGCCCCACCTCAACGCAAACATGGGTGCACACACCAACCTTGTGTTCTCTCTTAACCATCCTGACGAGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS-3UTR CAA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTTCCTCCAAGGCACTCTaGCCTTCTTCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGASSKAL*PSSWLR
Trigger: CCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGA...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATAGCCCAAGCCTGCCTTCACCAACATaGGATTTCCTGGACCTGGGA +
Preference number: 5 (lower is better)
Translates to: TIWHSQTWIDTLRLNSPSLPSPT*DFLDLG
Trigger: TCCCAGGTCCAGGAAATCCAATGTTGGTGAAGGCAG...GCTTGGGCTATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAGGGGGTGGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGGCCTTCCATCACTGTTaGCACAGAGTTCTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: EGVDEYILRSRATGKSRTAFHHC*HRVLFL
Trigger: TAAGAAGAGAACTCTGTGCAAACAGTGATGGAAGGC...CGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCCACCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CTTCCCCCAGAATCCCAAGCATGGACAACCTGGGTGCCTCCACAATACCAGGAAGAGGGTCTTTGTTTTTaGGTCTTCTACCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: LPPESQAWTTWVPPQYQEEGLCF*VFYPAL
Trigger: AAGTGCTGGGTAGAAGACCAAAAAACAAAGACCCTC...TTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS CCA 90 bp CCATCAAGGAGAGGAAAAAGACATCCCAGTATCTGGCTGGGTGACTaGGGAAAGCTCGTCAGGATGGTTAAGAGAGAACACAAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: PSRRGKRHPSIWLGD*GKLVRMVKREHKVG
Trigger: ACCAACCTTGTGTTCTCTCTTAACCATCCTGACGAGCTTTCCCCAGTCACCCAGCCAGATACTGGGATGTCTTTTTCCTCTCCTTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS-3UTR CAA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAAGCTGCAGACGCTCGTaGGACTCGCTGAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGSCRRS*DSLSSR
Trigger: CCGGCTGCTCAGCGAGTCCAACGAGCGTCTGCAGCT...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTATCAGGGCCAGTGTGTaGTGGTCGAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGAIRASV*WSKFSS
Trigger: GGACGAGAACTTCGACCACAACACACTGGCCCTGAT...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGATAGACACCCTAAGATaGAATAGCCCAAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRIDTLR*NSPSRA
Trigger: AGCCCTGCTTGGGCTATTCAATCTTAGGGTGTCTAT...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp ATTGCTCCTTCTGGACTGGGTGCCCTGGCCCATTATCTCACCTGCAAGCCTAGTTTCCCAAACTCAAATTaGGGATTCAGCTTATGCCAG +
Preference number: 5 (lower is better)
Translates to: IAPSGLGALAHYLTCKPSFPNSN*GFSLCQ
Trigger: CTGGCATAAGCTGAATCCCAAATTTGAGTTTGGGAA...ACTAGGCTTGCAGGTGAGATAATGGGCCAGGGCACCCAGTCCAGAAGGAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp ACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTACATCCCCAAACTTGACTTaGGGCTCAATGTATATTCAA +
Preference number: 5 (lower is better)
Translates to: TWVPPQYQETPATSTGLTSPNLT*GSMYIQ
Trigger: TTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGA...TGTAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAGCCTTCCATCACTGTTaGCACAGAGTTCTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGAFHHC*HRVLFL
Trigger: TAAGAAGAGAACTCTGTGCAAACAGTGATGGAAGGC...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS GCA 90 bp AGGATGGTTAAGAGAGAACACAAGGTTGGTGTGTGCACCCATGTTTaGGTTGAGGTGGGGCAAATGTGTGTGTGGCAAAAACACACACCT +
Preference number: 5 (lower is better)
Translates to: RMVKREHKVGVCTHV*VEVGQMCVWQKHTP
Trigger: AGGTGTGTGTTTTTGCCACACACACATTTGCCCCACCTCAACGCAAACATGGGTGCACACACCAACCTTGTGTTCTCTCTTAACCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS-3UTR CAA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGTTCTCCAGCTTGTCATaGAGGTCATGGATGGATGTT +
Preference number: 5 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRFSSLS*RSWMDV
Trigger: AACATCCATCCATGACCTCAATGACAAGCTGGAGAA...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGAGCTAGCTCATTCTCCAGCTaGTCATTGAGGTCATGGATG +
Preference number: 5 (lower is better)
Translates to: EYILRSRATGKSRTRLGASSFSS*SLRSWM
Trigger: CATCCATGACCTCAATGACAAGCTGGAGAATGAGCT...AGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATATAGACACCCTAAGATaGAATAGCCCAAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNIDTLR*NSPSRA
Trigger: AGCCCTGCTTGGGCTATTCAATCTTAGGGTGTCTAT...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
CDS-3UTR CAA 90 bp GGGAAAGCAATGAAAATGGTGGCAGCTGGGCGGATCTTAGGAATTCCGGGAGGAAGGAGCGGGTATTTCTaGGGAATAATATTCCTACCA +
Preference number: 5 (lower is better)
Translates to: GKAMKMVAAGRILGIPGGRSGYF*GIIFLP
Trigger: TGGTAGGAATATTATTCCCAAGAAATACCCGCTCCT...TCCTCCCGGAATTCCTAAGATCCGCCCAGCTGCCACCATTTTCATTGCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CAACCTGGGTGCCTCCACAATACCAGGAAACCCCAGCCACATCCACCGGACTTATGTCTTAAAACCAGGTaGTTTATTGGTACGTACACA +
Preference number: 5 (lower is better)
Translates to: QPGCLHNTRKPQPHPPDLCLKTR*FIGTYT
Trigger: TGTGTACGTACCAATAAACAACCTGGTTTTAAGACA...TAAGTCCGGTGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS TCA 90 bp GCTGGTATAGCTGGTCGGGAGACACATGAATCCATCCTCCACCCATaGGGGAGGAAGGGCAGTCCAATACAATTTCAGTTTATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: AGIAGRETHESILHP*GRKGSPIQFQFIFN
Trigger: ATTGAAGATAAACTGAAATTGTATTGGACTGCCCTTCCTCCCTCATGGGTGGAGGATGGATTCATGTGTCTCCCGACCAGCTATACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS-3UTR CAA 90 bp AGCTGCCAGACCATTTGGCACAGCCAGACGTGGATAGACACCCTAAGATTGAATTTCTCCAGCTTGTCATaGAGGTCATGGATGGATGTT +
Preference number: 5 (lower is better)
Translates to: SCQTIWHSQTWIDTLRLNFSSLS*RSWMDV
Trigger: AACATCCATCCATGACCTCAATGACAAGCTGGAGAA...ATTCAATCTTAGGGTGTCTATCCACGTCTGGCTGTGCCAAATGGTCTGGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGACAGCTGGTCCACCTCTaGGCGCAGCTTCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGQLVHL*AQLLNL
Trigger: GAGATTGAGAAGCTGCGCCAAGAGGTGGACCAGCTG...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGGGATGGAACCACGCTaGCGCAGCTGCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGGMEPR*RSCFRF
Trigger: AAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp CATCAAGAGCACCCTGAAGGAGTCAGATGGCTATGCATTGCCCAACTCCACCAATCCCCAAACTTGACTTaGGGCTCAATGTATATTCAA +
Preference number: 5 (lower is better)
Translates to: HQEHPEGVRWLCIAQLHQSPNLT*GSMYIQ
Trigger: TTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGA...TTGGTGGAGTTGGGCAATGCATAGCCATCTGACTCCTTCAGGGTGCTCTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TGGGCTCAATGTATATTCAATCCACCCATTAGGTTCATTTTTATAGGGTTGGGAGTGTCCGACAGCCGCTaGTTGTGGTCCTCATTCATC +
Preference number: 5 (lower is better)
Translates to: WAQCIFNPPIRFIFIGLGVSDSR*LWSSFI
Trigger: GATGAATGAGGACCACAACAAGCGGCTGTCGGACAC...TCCCAACCCTATAAAAATGAACCTAATGGGTGGATTGAATATACATTGAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCAATAGACACCCTAAGATaGAATAGCCCAAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPIDTLR*NSPSRA
Trigger: AGCCCTGCTTGGGCTATTCAATCTTAGGGTGTCTAT...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GGACGAATATATTCTGAGATCCAGGGCAACCGGAAAGTCACGGACGAGACTAGGTGTCTTAAAACCAGGTaGTTTATTGGTACGTACACA +
Preference number: 5 (lower is better)
Translates to: GRIYSEIQGNRKVTDETRCLKTR*FIGTYT
Trigger: TGTGTACGTACCAATAAACAACCTGGTTTTAAGACA...CCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATCTCAGAATATATTCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp TGTTTGCACAGAGTTCTCTTCTTAACACCTCCCTGCAACACTTCTCAAGGTGCTAGGAGCGGGTATTTCTaGGGAATAATATTCCTACCA +
Preference number: 5 (lower is better)
Translates to: CLHRVLFLTPPCNTSQGARSGYF*GIIFLP
Trigger: TGGTAGGAATATTATTCCCAAGAAATACCCGCTCCT...AGCACCTTGAGAAGTGTTGCAGGGAGGTGTTAAGAAGAGAACTCTGTGCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS-3UTR CAA 90 bp GTCTGCCTTTTCCCCAAACTTGACTTTGGGCTCAATGTATATTCAATCCACCCATGTCTTAAAACCAGGTaGTTTATTGGTACGTACACA +
Preference number: 5 (lower is better)
Translates to: VCLFPKLDFGLNVYSIHPCLKTR*FIGTYT
Trigger: TGTGTACGTACCAATAAACAACCTGGTTTTAAGACA...TGGGTGGATTGAATATACATTGAGCCCAAAGTCAAGTTTGGGGAAAAGGCAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS TCA 72 bp CACGGAAGCCCGCCGGGAGGGTCTCCGCGGAAGCGCTaGGCATGCCGCCGCGACCGTGGTGCTCCCGCGGCC +
Preference number: 6 (lower is better)
Translates to: HGSPPGGSPRKR*ACRRDRGAPAA
Trigger: GGCCGCGGGAGCACCACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCCGGCGGGCTTCCGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS GCA 72 bp TCCGCGGAAGCGCTGAGCATGCCGCCGCGACCGTGGTaGTCCCGCGGCCGGAAGCGCTTCCTCCAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: SAEALSMPPRPW*SRGRKRFLQEG
Trigger: GCCCTCCTGGAGGAAGCGCTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 72 bp CGGCCCTGGGGTGCCAGGAAGAAGCCCGCGCTCGGCTaGGCCTCGGCCATGCCCAGCCCGCCTGTTACTCAC +
Preference number: 6 (lower is better)
Translates to: RPWGARKKPALG*ASAMPSPPVTH
Trigger: GTGAGTAACAGGCGGGCTGGGCATGGCCGAGGCCCAGCCGAGCGCGGGCTTCTTCCTGGCACCCCAGGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 72 bp GCGGGAGGTGAGCTTAGGTGTGGAGCGGCCGCTGAGTaGTGGGGACGCGCTGGCCAGGGACAGGGCCGTCAG +
Preference number: 6 (lower is better)
Translates to: AGGELRCGAAAE*WGRAGQGQGRQ
Trigger: CTGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 72 bp GGAGGTGAGCTTAGGTGTGGAGCGGCCGCTGAGTGGTaGGGACGCGCTGGCCAGGGACAGGGCCGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: GGELRCGAAAEW*GRAGQGQGRQR
Trigger: TCTCTGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 72 bp GCCGTGTGGTCCTGCAGGGCCTGTGCCATGTGGACGTaGCCTCCTGACCTGGGCAGGGTGCTCCGTGACCAC +
Preference number: 6 (lower is better)
Translates to: AVWSCRACAMWT*PPDLGRVLRDH
Trigger: GTGGTCACGGAGCACCCTGCCCAGGTCAGGAGGCCACGTCCACATGGCACAGGCCCTGCAGGACCACACGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS GCA 72 bp AGCGGCGATGCACGCCTGGGGGTGCGTGTGTGGTTGTaGCCAGGGAGAACCGCACGTCTGCTGCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: SGDARLGVRVWL*PGRTARLLHCP
Trigger: TGGGCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS CCA 72 bp TCCTGGGGGAGGGCGGAGTTAAGGTGGCGCTGGAGCTaGTCCCGCTCGTGTATGGCATCCTGGAGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: SWGRAELRWRWS*SRSCMASWSRL
Trigger: GAGCCGGCTCCAGGATGCCATACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTCCGCCCTCCCCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 72 bp GGGACGCGCTGGCCAGGGACAGGGCCGTCAGAGAGGTaGGGATGGAACCACGCTTGCGCAGCTGCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: GTRWPGTGPSER*GWNHACAAASG
Trigger: ACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCAGCGCGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS TCA 72 bp GCCATGCCCAGCCCGCCTGTTACTCACCTTCAGGCATaGTCTTCTTTGGCGGGGCCGGTGGGGGCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: AMPSPPVTHLQA*SSLAGPVGAAG
Trigger: CCCTGCAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCTGAAGGTGAGTAACAGGCGGGCTGGGCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS GCA 72 bp CCTCAATGCCGAGTAGCGGCGATGCACGCCTGGGGGTaGGTGTGTGGTTGTGCCCAGGGAGAACCGCACGTC +
Preference number: 6 (lower is better)
Translates to: PQCRVAAMHAWG*VCGCAQGEPHV
Trigger: GACGTGCGGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS CAA 72 bp AGTAGCGGCGATGCACGCCTGGGGGTGCGTGTGTGGTaGTGCCCAGGGAGAACCGCACGTCTGCTGCACTGC +
Preference number: 6 (lower is better)
Translates to: SSGDARLGVRVW*CPGRTARLLHC
Trigger: GCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS CAA 90 bp TCAATGCCGAGTAGCGGCGATGCACGCCTGGGGGTGCGTGTGTGGTaGTGCCCAGGGAGAACCGCACGTCTGCTGCACTGCCCATGTGCG +
Preference number: 6 (lower is better)
Translates to: SMPSSGDARLGVRVW*CPGRTARLLHCPCA
Trigger: CGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS CAA 90 bp GGCAGGGCCTTCTCAGCGTCAGGGGACAGGGAGGGACTCACAGGGTaGGCACCTCCAGGGGAACCCAGTGCATGGGTCTCAGAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: GRAFSASGDREGLTG*APPGEPSAWVSEWA
Trigger: TGCCCACTCTGAGACCCATGCACTGGGTTCCCCTGGAGGTGCCAACCCTGTGAGTCCCTCCCTGTCCCCTGACGCTGAGAAGGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS GCA 72 bp CTGTTGCTTTCCCACGCACACCCTGCCGTGTGGTCCTaGAGGGCCTGTGCCATGTGGACGTGGCCTCCTGAC +
Preference number: 6 (lower is better)
Translates to: LLLSHAHPAVWS*RACAMWTWPPD
Trigger: GTCAGGAGGCCACGTCCACATGGCACAGGCCCTGCAGGACCACACGGCAGGGTGTGCGTGGGAAAGCAACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 72 bp CTCTTCCCTCAATGCCGAGTAGCGGCGATGCACGCCTaGGGGTGCGTGTGTGGTTGTGCCCAGGGAGAACCG +
Preference number: 6 (lower is better)
Translates to: LFPQCRVAAMHA*GCVCGCAQGEP
Trigger: CGGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS CCA 72 bp CGCTGGCCAGGGACAGGGCCGTCAGAGAGGTGGGGATaGAACCACGCTTGCGCAGCTGCTTCAGGTTTAGGG +
Preference number: 6 (lower is better)
Translates to: RWPGTGPSERWG*NHACAAASGLG
Trigger: CCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS GCA 72 bp GTGTGTGGTTGTGCCCAGGGAGAACCGCACGTCTGCTaGACTGCCCATGTGCGACCTGGAGTGGACGCCATC +
Preference number: 6 (lower is better)
Translates to: VCGCAQGEPHVC*TAHVRPGVDAI
Trigger: GATGGCGTCCACTCCAGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCACACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS GCA 72 bp TGGTTGTGCCCAGGGAGAACCGCACGTCTGCTGCACTaGCCATGTGCGACCTTGAGCGGTGATGGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: WLCPGRTARLLH*PCATLSGDGGE
Trigger: CTCTCCCCCATCACCGCTCAAGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS GCA 72 bp CACTCCAGGTCCTCTGTTGCTTTCCCACGCACACCCTaGCGTGTGGTCCTGCAGGGCCTGTGCCATGTGGAC +
Preference number: 6 (lower is better)
Translates to: HSRSSVAFPRTP*RVVLQGLCHVD
Trigger: GTCCACATGGCACAGGCCCTGCAGGACCACACGGCAGGGTGTGCGTGGGAAAGCAACAGAGGACCTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 72 bp CCCGCTCGTGTATGGCATCCTGGAGCCGGCTCTGTGTaGCCGCCAAGGTCTCCTGACTCTCCCGAAGAGACT +
Preference number: 6 (lower is better)
Translates to: PARVWHPGAGSV*PPRSPDSPEET
Trigger: AGTCTCTTCGGGAGAGTCAGGAGACCTTGGCGGCCACACAGAGCCGGCTCCAGGATGCCATACACGAGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 72 bp GCAAATTCCTGGGGGAGGGCGGAGTTAAGGTGGCGCTaGAGCTGGTCCCGCTCGTGTATGGCATCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: ANSWGRAELRWR*SWSRSCMASWS
Trigger: GCTCCAGGATGCCATACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTCCGCCCTCCCCCAGGAATTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 72 bp GGGGGAGACAACATCCGCAGAGCCCACCAGACCCCCTaGCTCATCCTCATCCACGTCGGAGATCTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: GGDNIRRAHQTP*LILIHVGDLRV
Trigger: GACCCTGAGATCTCCGACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGCTCTGCGGATGTTGTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
ENST00000600447.1
CDS CCA 72 bp CTCACAGGGTTGGCACCTCCAGGGGAACCCAGTGCATaGGTCTCAGAGTGGGCAGTGCCAGGCGAGTGGACA +
Preference number: 6 (lower is better)
Translates to: LTGLAPPGEPSA*VSEWAVPGEWT
Trigger: TGTCCACTCGCCTGGCACTGCCCACTCTGAGACCCATGCACTGGGTTCCCCTGGAGGTGCCAACCCTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS CCA 72 bp GCAGGGCCTGTGCCATGTGGACGTGGCCTCCTGACCTaGGCAGGGTGCTCCGTGACCACCCAACTTGAGAAA +
Preference number: 6 (lower is better)
Translates to: AGPVPCGRGLLT*AGCSVTTQLEK
Trigger: TTTCTCAAGTTGGGTGGTCACGGAGCACCCTGCCCAGGTCAGGAGGCCACGTCCACATGGCACAGGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CAA 90 bp CTGGCCAGGGACAGGGCCGTCAGAGAGGTGGGGATGGAACCACGCTaGCGCAGCTGCTTCAGGTTTAGGGCTTCCATGCTGCCACTGGTT +
Preference number: 6 (lower is better)
Translates to: LARDRAVREVGMEPR*RSCFRFRASMLPLV
Trigger: AACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS TCA 72 bp GGTATTGTGCAGCAGACGTGCCTTCCTGACTCTCAGTaGGCCTCAAGCCCGCTGAGCCCAGGGGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GIVQQTCLPDSQ*ASSPLSPGERL
Trigger: CAGCCTCTCCCCTGGGCTCAGCGGGCTTGAGGCTCACTGAGAGTCAGGAAGGCACGTCTGCTGCACAATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS GCA 72 bp TGGTTGTGCCCAGGGAGAACCGCACGTCTGCTGCACTaGCCATGTGCGACCTGGAGTGGACGCCATCCACAA +
Preference number: 6 (lower is better)
Translates to: WLCPGRTARLLH*PCATWSGRHPQ
Trigger: TTGTGGATGGCGTCCACTCCAGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS GCA 72 bp GCTGAGCCCAGGGGAGAGGCTGTGTTACAGAGGACCTaGAGCGTGGCAAAGGAAGCCTGTCTCACTCCGGGA +
Preference number: 6 (lower is better)
Translates to: AEPRGEAVLQRT*SVAKEACLTPG
Trigger: TCCCGGAGTGAGACAGGCTTCCTTTGCCACGCTGCAGGTCCTCTGTAACACAGCCTCTCCCCTGGGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 72 bp AAGGTGGCAAATTCCTGGGGGAGGGCGGAGTTAAGGTaGCGCTGGAGCTGGTCCCGCTCGTGTATGGCATCC +
Preference number: 6 (lower is better)
Translates to: KVANSWGRAELR*RWSWSRSCMAS
Trigger: GGATGCCATACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTCCGCCCTCCCCCAGGAATTTGCCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 72 bp AGCCGCTTGTTGTGGTCCTCATTCATCTTTTCCCGCTaGCGCACCTGCACAGCCGTCCGTGCCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRLLWSSFIFSR*RTCTAVRASSW
Trigger: CCAGGAGCTGGCACGGACGGCTGTGCAGGTGCGCCAGCGGGAAAAGATGAATGAGGACCACAACAAGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295706.8
ENST00000447715.6
CDS TCA 72 bp GGACAGCAGGGCTGGAAGATGGCCCTTCTCTTAGACTaGGTGCCGGAGGCTGGCAGAGTCCCAGCTGGATCT +
Preference number: 6 (lower is better)
Translates to: GQQGWKMALLLD*VPEAGRVPAGS
Trigger: AGATCCAGCTGGGACTCTGCCAGCCTCCGGCACTCAGTCTAAGAGAAGGGCCATCTTCCAGCCCTGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS GCA 72 bp ACAGGGCCGTCAGAGAGGTGGGGATGGAACCACGCTTaGGCAGCTGCTTCAGGTTTAGGGCTTCCATGCTGC +
Preference number: 6 (lower is better)
Translates to: TGPSERWGWNHA*AAASGLGLPCC
Trigger: GCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 72 bp CCAGGGGAGAGGCTGTGTTACAGAGGACCTGCAGCGTaGCAAAGGAAGCCTGTCTCACTCCGGGACAAGGCT +
Preference number: 6 (lower is better)
Translates to: PGERLCYRGPAA*QRKPVSLRDKA
Trigger: AGCCTTGTCCCGGAGTGAGACAGGCTTCCTTTGCCACGCTGCAGGTCCTCTGTAACACAGCCTCTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 72 bp TCAGAACATGGGGGACAGAGGCAGATCCCAGGCCCCTaGCCCACTTGCCTTGGTGAGGGCTGCAATTCTCTG +
Preference number: 6 (lower is better)
Translates to: SEHGGQRQIPGP*PTCLGEGCNSL
Trigger: CAGAGAATTGCAGCCCTCACCAAGGCAAGTGGGCCAGGGGCCTGGGATCTGCCTCTGTCCCCCATGTTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601609.1
CDS CAA 72 bp TCGCTGAGCAGCCGGTCCACTGTGTCCGACAGCCGCTaGTTGTGGTCCTCATTCATCTTTTCCCGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: SLSSRSTVSDSR*LWSSFIFSRWR
Trigger: GCGCCAGCGGGAAAAGATGAATGAGGACCACAACAAGCGGCTGTCGGACACAGTGGACCGGCTGCTCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000600426.5
CDS CAA 72 bp GACAGGGCCGTCAGAGAGGTGGGGATGGAACCACGCTaGCGCAGCTGCTTCAGGTTTAGGGCTTCCATGCTG +
Preference number: 6 (lower is better)
Translates to: DRAVREVGMEPR*RSCFRFRASML
Trigger: CAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS CAA 72 bp AGAACCGCACGTCTGCTGCACTGCCCATGTGCGACCTaGAGCGGTGATGGGGGAGAGAAAAGACAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: RTARLLHCPCAT*SGDGGEKRQAL
Trigger: CAGGGCCTGTCTTTTCTCTCCCCCATCACCGCTCAAGGTCGCACATGGGCAGTGCAGCAGACGTGCGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS CCA 72 bp GCAGCTGCTTCAGGTTTAGGGCTTCCATGCTGCCACTaGTTACACGCGTCTCAATCTCCTCCGCGCGGAGCT +
Preference number: 6 (lower is better)
Translates to: AAASGLGLPCCH*LHASQSPPRGA
Trigger: AGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
ENST00000600447.1
CDS CCA 72 bp CATCTGACACACGTGGCGCAGGAGGGCTCCAGGCACTaGGAGATGTTGGAAGGGATGATGTCTAGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: HLTHVAQEGSRH*EMLEGMMSRGP
Trigger: AGGGCCTCTAGACATCATCCCTTCCAACATCTCCCAGTGCCTGGAGCCCTCCTGCGCCACGTGTGTCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS CCA 72 bp GGGCTGCCGTGTAAGCAAGAGAGCAGACGTATGCCCTaGTGCTCCAGGGGTCAGAATGAGCCAGGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: GLPCKQESRRMP*CSRGQNEPGEK
Trigger: TTTCTCCCCTGGCTCATTCTGACCCCTGGAGCACCAGGGCATACGTCTGCTCTCTTGCTTACACGGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS CCA 72 bp AGCGGGCCTGATGACCCACAGAGGGTCCCTGAACTGTaGTACTCTAAGTTGCAGCAGACCCCCTGGCTCATC +
Preference number: 6 (lower is better)
Translates to: SGPDDPQRVPEL*YSKLQQTPWLI
Trigger: GATGAGCCAGGGGGTCTGCTGCAACTTAGAGTACCACAGTTCAGGGACCCTCTGTGGGTCATCAGGCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447715.6
CDS CAA 90 bp AGGTGGGGCAAATGTGTGTGTGGCAAAAACACACACCTCCCAGGCTaGACTGGGAGCCAGGCAAGATGCCCAGCTCTCCCAACACTCCCC +
Preference number: 6 (lower is better)
Translates to: RWGKCVCGKNTHLPG*TGSQARCPALPTLP
Trigger: GGGGAGTGTTGGGAGAGCTGGGCATCTTGCCTGGCTCCCAGTCAAGCCTGGGAGGTGTGTGTTTTTGCCACACACACATTTGCCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS TCA 72 bp GGTCCTCCTCGAGTTCAGTCACGGTTGTTGTTAGGGTaGCCAGTCGCTCCCGGGCCTGGCTCAACTCAAAGT +
Preference number: 6 (lower is better)
Translates to: GPPRVQSRLLLG*PVAPGPGSTQS
Trigger: ACTTTGAGTTGAGCCAGGCCCGGGAGCGACTGGTCACCCTAACAACAACCGTGACTGAACTCGAGGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000601609.1
CDS GCA 72 bp CACGCTTGCGCAGCTGCTTCAGGTTTAGGGCTTCCATaGTGCCACTGGTTACACGCGTCTCAATCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: HACAAASGLGLP*CHWLHASQSPP
Trigger: CGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
ENST00000600447.1
CDS GCA 72 bp GTCAGAGAGGTGGGGATGGAACCACGCTTGCGCAGCTaGTTCAGGTTTAGGGCTTCCATGCTGCCACTGGTT +
Preference number: 6 (lower is better)
Translates to: VREVGMEPRLRS*FRFRASMLPLV
Trigger: AACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599514.1
ENST00000599966.5
ENST00000600426.5
CDS GCA 72 bp GTGCCATGTGGACGTGGCCTCCTGACCTGGGCAGGGTaGTCCGTGACCACCCAACTTGAGAAAGCTTTAGTT +
Preference number: 6 (lower is better)
Translates to: VPCGRGLLTWAG*SVTTQLEKALV
Trigger: AACTAAAGCTTTCTCAAGTTGGGTGGTCACGGAGCACCCTGCCCAGGTCAGGAGGCCACGTCCACATGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 72 bp ACGGTTGTTGTTAGGGTGACCAGTCGCTCCCGGGCCTaGCTCAACTCAAAGTTCTGCTTCTCCAGGAGCTCC +
Preference number: 6 (lower is better)
Translates to: TVVVRVTSRSRA*LNSKFCFSRSS
Trigger: GGAGCTCCTGGAGAAGCAGAACTTTGAGTTGAGCCAGGCCCGGGAGCGACTGGTCACCCTAACAACAACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
CDS CCA 72 bp AGAGTCCCAGCTGGATCTAGCGACACCCATCGTTTCTaGAGGGCAGTGTGTCTGCAAATGCCGAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RVPAGSSDTHRF*RAVCLQMPKAR
Trigger: CCTGGCCTTCGGCATTTGCAGACACACTGCCCTCCAGAAACGATGGGTGTCGCTAGATCCAGCTGGGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367240.6
CDS CAA 72 bp CACGTGGCGCAGGAGGGCTCCAGGCACTGGGAGATGTaGGAAGGGATGATGTCTAGAGGCCCTTTTCACTCT +
Preference number: 6 (lower is better)
Translates to: HVAQEGSRHWEM*EGMMSRGPFHS
Trigger: AGAGTGAAAAGGGCCTCTAGACATCATCCCTTCCAACATCTCCCAGTGCCTGGAGCCCTCCTGCGCCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS CAA 90 bp CATCTGACACACGTGGCGCAGGAGGGCTCCAGGCACTGGGAGATGTaGGAAGGGATGATGTCTAGAGGCCCTTTTCACTCTGAGGGTCTT +
Preference number: 6 (lower is better)
Translates to: HLTHVAQEGSRHWEM*EGMMSRGPFHSEGL
Trigger: AAGACCCTCAGAGTGAAAAGGGCCTCTAGACATCATCCCTTCCAACATCTCCCAGTGCCTGGAGCCCTCCTGCGCCACGTGTGTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS TCA 72 bp GGAGAGCATGTGTCCGTAGAGATAGTGGGAGTGAGCTaGGGGAGAGAGAGAGACAGGCATCGCACTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GEHVSVEIVGVS*GRERDRHRTVR
Trigger: CCTCACAGTGCGATGCCTGTCTCTCTCTCTCCCTCAGCTCACTCCCACTATCTCTACGGACACATGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS GCA 72 bp CAAGGCTCCATGCACACCACTCTCATGCAGGTTTCCTaGGTAGTCCCGGAGCCCAATAGACTGGACCCAATG +
Preference number: 6 (lower is better)
Translates to: QGSMHTTLMQVS*VVPEPNRLDPM
Trigger: CATTGGGTCCAGTCTATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAGAGTGGTGTGCATGGAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000597023.1
ENST00000599966.5
ENST00000600426.5
CDS GCA 72 bp CTGCCGTGTAAGCAAGAGAGCAGACGTATGCCCTGGTaGTCCAGGGGTCAGAATGAGCCAGGGGAGAAAGTT +
Preference number: 6 (lower is better)
Translates to: LPCKQESRRMPW*SRGQNEPGEKV
Trigger: AACTTTCTCCCCTGGCTCATTCTGACCCCTGGAGCACCAGGGCATACGTCTGCTCTCTTGCTTACACGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS GCA 72 bp GAGAGAGAGAGACAGGCATCGCACTGTGAGGCAGGTTaGAGGGCATCTGCGAGAGAGGTTGTAGGATGTGTG +
Preference number: 6 (lower is better)
Translates to: ERERQASHCEAG*RASAREVVGCV
Trigger: CACACATCCTACAACCTCTCTCGCAGATGCCCTGCAACCTGCCTCACAGTGCGATGCCTGTCTCTCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 72 bp AGCTCCAACCAGGAGACCACAGTAGGACCATCCCACTaGGCAAAGGGCATTCCTTTCCTGCGGGCATCTTCA +
Preference number: 6 (lower is better)
Translates to: SSNQETTVGPSH*AKGIPFLRASS
Trigger: TGAAGATGCCCGCAGGAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTACTGTGGTCTCCTGGTTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS CCA 72 bp ATCACTTGGCGTGCCTGGGTGTTCTGTGTGGGGATCTaGAGGATCAGGGCCAGTGTGTTGTGGTCGAAGTTC +
Preference number: 6 (lower is better)
Translates to: ITWRAWVFCVGI*RIRASVLWSKF
Trigger: GAACTTCGACCACAACACACTGGCCCTGATCCTCCAGATCCCCACACAGAACACCCAGGCACGCCAAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS CCA 72 bp TGTGTGTGGCAAAAACACACACCTCCCAGGCTTGACTaGGAGCCAGGCAAGATGCCCAGCTCTCCCAACACT +
Preference number: 6 (lower is better)
Translates to: CVWQKHTPPRLD*EPGKMPSSPNT
Trigger: AGTGTTGGGAGAGCTGGGCATCTTGCCTGGCTCCCAGTCAAGCCTGGGAGGTGTGTGTTTTTGCCACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS CAA 90 bp TGTTTCTTCTTTAGCCGCCGGTCCTTCTCTGCCTGGGTCCCCAGCTaGGCAGGCACCATAGGCTCCTGCATACTGAATTCGGAGTCTGTT +
Preference number: 6 (lower is better)
Translates to: CFFFSRRSFSAWVPS*AGTIGSCILNSESV
Trigger: AACAGACTCCGAATTCAGTATGCAGGAGCCTATGGTGCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGACCGGCGGCTAAAGAAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000599966.5
ENST00000600426.5
CDS CAA 90 bp TCCCCGTCATCCAGCTTCCGGTCTGTGCCCAAGGCCAACAGGTTATaGAACTCTCTTTCCATCACTTGGCGTGCCTGGGTGTTCTGTGTG +
Preference number: 6 (lower is better)
Translates to: SPSSSFRSVPKANRL*NSLSITWRAWVFCV
Trigger: CACACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGGATGACGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS TCA 72 bp CCAGCTTCCGGTCTGTGCCCAAGGCCAACAGGTTATTaGACTCTCTTTCCATCACTTGGCGTGCCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: PASGLCPRPTGY*TLFPSLGVPGC
Trigger: ACACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS TCA 72 bp AATGTGTGTGTGGCAAAAACACACACCTCCCAGGCTTaGCTGGGAGCCAGGCAAGATGCCCAGCTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: NVCVAKTHTSQA*LGARQDAQLSQ
Trigger: TTGGGAGAGCTGGGCATCTTGCCTGGCTCCCAGTCAAGCCTGGGAGGTGTGTGTTTTTGCCACACACACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS CAA 72 bp TCCAGCTTCCGGTCTGTGCCCAAGGCCAACAGGTTATaGAACTCTCTTTCCATCACTTGGCGTGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: SSFRSVPKANRL*NSLSITWRAWV
Trigger: CACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272198.10
ENST00000295706.8
ENST00000367240.6
ENST00000447715.6
ENST00000486360.1
ENST00000599966.5
ENST00000600426.5
CDS CAA 72 bp AAATGTGTGTGTGGCAAAAACACACACCTCCCAGGCTaGACTGGGAGCCAGGCAAGATGCCCAGCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: KCVCGKNTHLPG*TGSQARCPALP
Trigger: TGGGAGAGCTGGGCATCTTGCCTGGCTCCCAGTCAAGCCTGGGAGGTGTGTGTTTTTGCCACACACACATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS TCA 72 bp AGGAGGGCTCCAGGCACTGGGAGATGTTGGAAGGGATaGTGTCTAGAGGCCCTTTTCACTCTGAGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: RRAPGTGRCWKG*CLEALFTLRVF
Trigger: AAAGACCCTCAGAGTGAAAAGGGCCTCTAGACATCATCCCTTCCAACATCTCCCAGTGCCTGGAGCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS TCA 72 bp CCTGACCTGGGCAGGGTGCTCCGTGACCACCCAACTTaGGAAAGCTTTAGTTTTCATAGCGACCCTACCTCA +
Preference number: 6 (lower is better)
Translates to: PDLGRVLRDHPT*ESFSFHSDPTS
Trigger: TGAGGTAGGGTCGCTATGAAAACTAAAGCTTTCTCAAGTTGGGTGGTCACGGAGCACCCTGCCCAGGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS TCA 72 bp TGCCTGAATAGCCAGCAGCACTCATTCTCTAAGGCCTaGGCCTCTGCTCCAAGAACACTCCAGGTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: CLNSQQHSFSKA*ASAPRTLQVLC
Trigger: ACAGAGGACCTGGAGTGTTCTTGGAGCAGAGGCTCAGGCCTTAGAGAATGAGTGCTGCTGGCTATTCAGGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS GCA 72 bp AGCAGGACACAGAGCTGTCACAAATGTCTGAAGGGCTaGCGTGTAAGCAAGAGAGCAGACGTATGCCCTGGT +
Preference number: 6 (lower is better)
Translates to: SRTQSCHKCLKG*RVSKRADVCPG
Trigger: ACCAGGGCATACGTCTGCTCTCTTGCTTACACGGCAGCCCTTCAGACATTTGTGACAGCTCTGTGTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272198.10
ENST00000599966.5
CDS GCA 72 bp TCATGTCCCCATAGGCCAGGGTCTAGGGAAATGAGATaGAGGAGGCTATTATGGGGGAGGAAGGTAGAGCCA +
Preference number: 6 (lower is better)
Translates to: SCPHRPGSREMR*RRLLWGRKVEP
Trigger: TGGCTCTACCTTCCTCCCCCATAATAGCCTCCTGCATCTCATTTCCCTAGACCCTGGCCTATGGGGACATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CCA 72 bp GTATCTGGCTGGGTGACTGGGGAAAGCTCGTCAGGATaGTTAAGAGAGAACACAAGGTTGGTGTGTGCACCC +
Preference number: 6 (lower is better)
Translates to: VSGWVTGESSSG*LRENTRLVCAP
Trigger: GGGTGCACACACCAACCTTGTGTTCTCTCTTAACCATCCTGACGAGCTTTCCCCAGTCACCCAGCCAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS TCA 72 bp GCTGGTCGGGAGACACATGAATCCATCCTCCACCCATaGGGGAGGAAGGGCAGTCCAATACAATTTCAGTTT +
Preference number: 6 (lower is better)
Translates to: AGRETHESILHP*GRKGSPIQFQF
Trigger: AAACTGAAATTGTATTGGACTGCCCTTCCTCCCTCATGGGTGGAGGATGGATTCATGTGTCTCCCGACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486360.1
CDS CAA 90 bp TGGTTAAGAGAGAACACAAGGTTGGTGTGTGCACCCATGTTTGCGTaGAGGTGGGGCAAATGTGTGTGTGGCAAAAACACACACCTCCCA +
Preference number: 6 (lower is better)
Translates to: WLRENTRLVCAPMFA*RWGKCVCGKNTHLP
Trigger: TGGGAGGTGTGTGTTTTTGCCACACACACATTTGCCCCACCTCAACGCAAACATGGGTGCACACACCAACCTTGTGTTCTCTCTTAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594656.1
CDS GCA 72 bp AATATGAAATCCTTCCTGTTGACTCTGGGTTGCATTTaGGGTATTGTGCAGCAGACGTGCCTTCCTGACTCT +
Preference number: 6 (lower is better)
Translates to: NMKSFLLTLGCI*GIVQQTCLPDS
Trigger: AGAGTCAGGAAGGCACGTCTGCTGCACAATACCGCAAATGCAACCCAGAGTCAACAGGAAGGATTTCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486360.1