RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPFIA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000177380

Ensembl transcript IDs: ENST00000334186.9, ENST00000421230.6, ENST00000602351.5, ENST00000602492.5, ENST00000602509.5, ENST00000602655.5, ENST00000602716.5, ENST00000602726.1, ENST00000602783.1, ENST00000602800.1, ENST00000602848.5, ENST00000602897.1, ENST00000602905.1

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCG +
Preference number: 1 (lower is better)
Translates to: ALCEAGARTPAGLYR*SSPRRELPRPLSPA
Trigger: CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR GCA 90 bp ACCTGCATGACGCCGGGCAGCGCGTGGAGCAGTGAAGATCCACCGTaGCGCCCCGCACCCCCAAGGTCGCCCAGCACGGTCCTCACCTGG +
Preference number: 1 (lower is better)
Translates to: TCMTPGSAWSSEDPP*RPAPPRSPSTVLTW
Trigger: CCAGGTGAGGACCGTGCTGGGCGACCTTGGGGGTGCGGGGCGGCACGGTGGATCTTCACTGCTCCACGCGCTGCCCGGCGTCATGCAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR GCA 90 bp CCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTaGGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCC +
Preference number: 1 (lower is better)
Translates to: PSQSSSCGLVQAPAL*EAGARTPAGLYRWS
Trigger: GGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR CCA 90 bp TTCTTCCGTCCGAGTGAGGTCACCTGCATGACGCCGGGCAGCGCGTaGAGCAGTGAAGATCCACCGTGCCGCCCCGCACCCCCAAGGTCG +
Preference number: 1 (lower is better)
Translates to: FFRPSEVTCMTPGSA*SSEDPPCRPAPPRS
Trigger: CGACCTTGGGGGTGCGGGGCGGCACGGTGGATCTTCACTGCTCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCACTCGGACGGAAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR TCA 90 bp GCCCAGCCTCGGGAAGATTCTTCCGTCCGAGTGAGGTCACCTGCATaGCGCCGGGCAGCGCGTGGAGCAGTGAAGATCCACCGTGCCGCC +
Preference number: 1 (lower is better)
Translates to: AQPREDSSVRVRSPA*RRAARGAVKIHRAA
Trigger: GGCGGCACGGTGGATCTTCACTGCTCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCACTCGGACGGAAGAATCTTCCCGAGGCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR CCA 90 bp GGAGCCCCGGAGAGCCCAGGGCTCCCGCTGCAGCCGAACGAAAGTTaGGGGGCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGT +
Preference number: 1 (lower is better)
Translates to: GAPESPGLPLQPNES*GATSQLSRELRLGG
Trigger: ACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCTGCAGCGGGAGCCCTGGGCTCTCCGGGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR TCA 90 bp AGGTCTCGTCCAGGGCGAGCAGTGCCCCGTGTACCCCGCTCTCCGTaGGGTTCGTGGCAAATTCCTTCAGGCCCAGCCCGGACACCCAAC +
Preference number: 1 (lower is better)
Translates to: RSRPGRAVPRVPRSP*GSWQIPSGPARTPN
Trigger: GTTGGGTGTCCGGGCTGGGCCTGAAGGAATTTGCCACGAACCTCACGGAGAGCGGGGTACACGGGGCACTGCTCGCCCTGGACGAGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR GCA 90 bp CCACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATaGAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCGC +
Preference number: 1 (lower is better)
Translates to: PRHVAQRHRGKRILP*KPRSQRRRGSAILR
Trigger: GCGCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR GCA 90 bp AACAGCCCAGCCTCGGGAAGATTCTTCCGTCCGAGTGAGGTCACCTaGATGACGCCGGGCAGCGCGTGGAGCAGTGAAGATCCACCGTGC +
Preference number: 1 (lower is better)
Translates to: NSPASGRFFRPSEVT*MTPGSAWSSEDPPC
Trigger: GCACGGTGGATCTTCACTGCTCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCACTCGGACGGAAGAATCTTCCCGAGGCTGGGCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR GCA 90 bp TGGAGGCCTGCACTAGCAGGAATAGGTCCGGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCAGCTTGCG +
Preference number: 1 (lower is better)
Translates to: WRPALAGIGPDRNAV*PGTPRSLAFWLQLA
Trigger: CGCAAGCTGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACCTATTCCTGCTAGTGCAGGCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR TCA 90 bp GGTTCGTGGCAAATTCCTTCAGGCCCAGCCCGGACACCCAACCCATaGCCCGCTCATTGGACCACACCATCACGTCTCGGATCTGGGTCT +
Preference number: 1 (lower is better)
Translates to: GSWQIPSGPARTPNP*PAHWTTPSRLGSGS
Trigger: AGACCCAGATCCGAGACGTGATGGTGTGGTCCAATGAGCGGGTCATGGGTTGGGTGTCCGGGCTGGGCCTGAAGGAATTTGCCACGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR GCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGCAGCCTCTCCCCGCATaGGGCCCGGGAGGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGQPLPA*GPGGKP
Trigger: GGGCTTCCCTCCCGGGCCGCATGCGGGGAGAGGCTG...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR TCA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCAGCGCGTGGAGCAGTaGAGATCCACCGTGCCGCCC +
Preference number: 2 (lower is better)
Translates to: AGARTPAGLYRWSSPRREQRVEQ*RSTVPP
Trigger: GGGCGGCACGGTGGATCTTCACTGCTCCACGCGCTG...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR-3UTR GCA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGACCGAGTGAGGTCACCTaGATGACGCCGGGCAGCGCG +
Preference number: 2 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARPSEVT*MTPGSA
Trigger: CGCGCTGCCCGGCGTCATGCAGGTGACCTCACTCGG...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR-3UTR CCA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAG +
Preference number: 2 (lower is better)
Translates to: QMVQSSARAPPPALPGEAAGLYR*SSPRRE
Trigger: CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGC...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR TCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGATTCTTCCGTCCGAGTaGGGTCACCTGGAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGILPSE*GHLEAC
Trigger: GCAGGCCTCCAGGTGACCTCACTCGGACGGAAGAAT...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602848.5
3UTR-3UTR TCA 90 bp CCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCATTCTTCCGTCCGAGTaGGGTCACCTGGAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: PAGLYRWSSPRRELPRPLILPSE*GHLEAC
Trigger: GCAGGCCTCCAGGTGACCTCACTCGGACGGAAGAAT...GAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602848.5
3UTR-3UTR TCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGGGAGGAGGCGGGGGCTaGGGGCGAGGTGAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLGGGGG*GRGERD
Trigger: GTCTCGCTCACCTCGCCCTCAGCCCCCGCCTCCTCC...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp CCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGACGGGGCGGAGCTGAGTaGCACAGGGGGCGAGGCTTG +
Preference number: 2 (lower is better)
Translates to: PSGIVERGFSHANPGARGRGGAE*HRGRGL
Trigger: CAAGCCTCGCCCCCTGTGCCACTCAGCTCCGCCCCG...TCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR TCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGTGGCGAGGCGTAGCTTaGGTCGGTGCAGCGGGTTGC +
Preference number: 2 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPWRGVA*VGAAGC
Trigger: GCAACCCGCTGCACCGACTCAAGCTACGCCTCGCCA...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGTCTCGGATCTGGGTCTaGCTTTCTTCCCGCCTCCGC +
Preference number: 2 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWSRIWV*LSSRLR
Trigger: GCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGA...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR GCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCGTAGCTTGAGTCGGTaGAGCGGGTTGCTGATGCCG +
Preference number: 2 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWRSLSR*SGLLMP
Trigger: CGGCATCAGCAACCCGCTGCACCGACTCAAGCTACG...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp CCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCCGCGCGCACTCCCGCTaGTCTGTACAGATGGTCCAG +
Preference number: 2 (lower is better)
Translates to: PLLPPLSPVHVVWSRPRPRAHSR*SVQMVQ
Trigger: CTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG...GGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGGCCCCAGAGGGTCAGTaGCCAGTGTCTCATCTGAGG +
Preference number: 2 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWAPEGQ*PVSHLR
Trigger: CCTCAGATGAGACACTGGCCACTGACCCTCTGGGGC...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp GGGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTGTGAGGTCACCTGCATaGCGCCGGGCAGCGCGTGGA +
Preference number: 2 (lower is better)
Translates to: GRDFFLPASSPSQSSSCGVRSPA*RRAARG
Trigger: TCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCAC...ACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR-3UTR GCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGAGTGAAGATCCACCGTaGCGCCCCGCACCCCCAAGG +
Preference number: 2 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGSEDPP*RPAPPR
Trigger: CCTTGGGGGTGCGGGGCGGCACGGTGGATCTTCACT...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR-3UTR GCA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACGTTTCCTGTGGAAGTaGGGGAGGAGGCGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERRFLWK*GRRRGL
Trigger: CAGCCCCCGCCTCCTCCCGCACTTCCACAGGAAACG...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp CCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAG +
Preference number: 2 (lower is better)
Translates to: PLLPPLSPVHVVWSRPRPAGLYR*SSPRRE
Trigger: CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGC...GGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CCA 90 bp AAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCGGGGCGGAGCTGAGTaGCACAGGGGGCGAGGCTTG +
Preference number: 2 (lower is better)
Translates to: KRILPCKPRSQRRRGSAIRGGAE*HRGRGL
Trigger: CAAGCCTCGCCCCCTGTGCCACTCAGCTCCGCCCCG...AATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CCA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCCCTGTGCATTCTGCGTaGGGATCTGCAGGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVPVHSA*GSAGAR
Trigger: CCTTGCTCCTGCAGATCCCCACGCAGAATGCACAGG...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGGGGCTGAGGGCGAGGTaGGCGAGACCATCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLGLRAR*ARPSPG
Trigger: TCCAGGAGATGGTCTCGCTCACCTCGCCCTCAGCCC...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR GCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATGTCCAGGGCGAGCAGTaGCCCGTGTACCCCGCTCTC +
Preference number: 2 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNVQGEQ*PVYPAL
Trigger: GAGAGCGGGGTACACGGGGCACTGCTCGCCCTGGAC...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp CGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGTCAGTCCAGTTCATGTaGTTTGGTCCAGGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: RHVAQRHRGKRILPCKPRSVQFM*FGPGPG
Trigger: GCCGGGGCCTGGACCAAACCACATGAACTGGACTGA...CCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CCA 90 bp CCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGACGAAGAAGGAAGACTTaGGCCCCGCGACTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PSGIVERGFSHANPGARGRRRKT*APRLGR
Trigger: CCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCG...TCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CCA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTGGGCCTGTCAGCTTaGCTAGCCCCAGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERLGLSA*LAPEGQ
Trigger: CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAG...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAG +
Preference number: 2 (lower is better)
Translates to: GFSHANPGARGEGEAPFCAGLYR*SSPRRE
Trigger: CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGC...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CCA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGAGAGCTGTCCCGGCCTaGGGGTCCCATTCGTCCCTT +
Preference number: 2 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLRAVPA*GSHSSL
Trigger: AAGGGACGAATGGGACCCCCAGGCCGGGACAGCTCT...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR CAA 90 bp CAGGCCTCCTCCAGGAGTTCATGCTTCCTCTTGTTCCTTCGGTCCTaGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: QASSRSSCFLLFLRS*SPGPVSLASPRGSV
Trigger: CACTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGAACAAGAGGAAGCATGAACTCCTGGAGGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGATTCTTCCGTCCGAGTaGGGTCACCTGGAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLILPSE*GHLEAC
Trigger: GCAGGCCTCCAGGTGACCTCACTCGGACGGAAGAAT...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp GTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGGAAGGTGCAGCGGGTTGCTaGTGCCGATCTCGCGCTGGA +
Preference number: 2 (lower is better)
Translates to: VAVRDSISSCVIHTFPVEGAAGC*CRSRAG
Trigger: TCCAGCGCGAGATCGGCATCAGCAACCCGCTGCACC...TTCCACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGTGTAGACTCACCCTGTaGAAGCTGTCCACCATCTTG +
Preference number: 2 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWCRLTL*KLSTIL
Trigger: CAAGATGGTGGACAGCTTTCACAGGGTGAGTCTACA...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR GCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATGCAGAGAATCTGGGGTaGCCTCACTTCCCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNAENLG*PHFPVG
Trigger: CCCCACGGGGAAGTGAGGGCACCCCAGATTCTCTGC...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR GCA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGAAGCTGCCGGGCCTGTaGATTCTGCGTGGGGATCTG +
Preference number: 2 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLKLPGL*ILRGDL
Trigger: CAGATCCCCACGCAGAATGCACAGGCCCGGCAGCTT...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTCGCGCGCACTCCCGCTaGTCTGTACAGATGGTCCAG +
Preference number: 2 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVRAHSR*SVQMVQ
Trigger: CTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CCA 90 bp AAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCGAAGAAGGAAGACTTaGGCCCCGCGACTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: KRILPCKPRSQRRRGSAIRRRKT*APRLGR
Trigger: CCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCG...AATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGTTTGTGCAGAGAATCTaGGGTGCCCTCACTTCCCCG +
Preference number: 2 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQFVQRI*GALTSP
Trigger: CGGGGAAGTGAGGGCACCCCAGATTCTCTGCACAAA...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCGCAAAAGGTAGGCCCTaGCGGCAGGCCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSAKGRP*RQASSR
Trigger: CCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGC...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR CAA 90 bp TGCTTCCTCTTGTTCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTaGGCTAGCCCCAGAGGGTCAGTGGCCAGTGTCTCATCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: CFLLFLRSLSPGPVS*ASPRGSVASVSSEG
Trigger: ACCCTCAGATGAGACACTGGCCACTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGAACAAGAGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR CAA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTaGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGC +
Preference number: 2 (lower is better)
Translates to: ALSSSSRLSVPKEIR*LNSFSRSCRACAFC
Trigger: GCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATGGATCTGCTCCCAGCTaGTCTCCTTGGTCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDGSAPS*SPWSRA
Trigger: AGCCCGAGACCAAGGAGATCAGCTGGGAGCAGATCC...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR GCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTTCTGCGTGGGGATCTaGAGGAGCAAGGCCAGGTCG +
Preference number: 2 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNFCVGI*RSKARS
Trigger: CGACCTGGCCTTGCTCCTGCAGATCCCCACGCAGAA...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGTCCTTCTTGTTAAGGTaGTCTAACATTCGAGCGTCC +
Preference number: 2 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWSFLLR*SNIRAS
Trigger: GGACGCTCGAATGTTAGATCACCTTAACAAGAAGGA...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACATTCCCCACCCACTCGTaGTTCATGTCGCCATATGCC +
Preference number: 2 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTFPTHS*FMSPYA
Trigger: GGCATATGGCGACATGAACCACGAGTGGGTGGGGAA...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGGGCCTATGGATGACTTaGTGCTCTTCTTCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLGLWMT*CSSSWG
Trigger: CCCCCAAGAAGAAGAGCATCAAGTCATCCATAGGCC...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR TCA 90 bp GTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGGAACTGGATCTCCGTGTCTaGCAGGTTGGCCATGATGGC +
Preference number: 2 (lower is better)
Translates to: VAVRDSISSCVIHTFPVELDLRV*QVGHDG
Trigger: GCCATCATGGCCAACCTGTCAGACACGGAGATCCAG...TTCCACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR GCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACAGTTCATGTCGCCATATaGCAGGATCTGCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTVHVAI*QDLLPA
Trigger: AGCTGGGAGCAGATCCTGGCATATGGCGACATGAAC...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR GCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACAGTCCCTTCTCTTTCTTaGCAAAGAGACGGCCTATGG +
Preference number: 2 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTVPSLS*QRDGLW
Trigger: CCATAGGCCGTCTCTTTGGCAAGAAAGAGAAGGGAC...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTAGGAAAGCGGACGTTTaGGGCGGGATTTCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFRKADV*GGISSS
Trigger: GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCT...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR TCA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGGAGACGGCCTATGGATaGCTTGATGCTCTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLETAYG*LDALLL
Trigger: AAGAAGAAGAGCATCAAGTCATCCATAGGCCGTCTC...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR CCA 72 bp GAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTC +
Preference number: 3 (lower is better)
Translates to: EAGARTPAGLYR*SSPRRELPRPL
Trigger: GAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR GCA 72 bp ACGCCGGGCAGCGCGTGGAGCAGTGAAGATCCACCGTaGCGCCCCGCACCCCCAAGGTCGCCCAGCACGGTC +
Preference number: 3 (lower is better)
Translates to: TPGSAWSSEDPP*RPAPPRSPSTV
Trigger: GACCGTGCTGGGCGACCTTGGGGGTGCGGGGCGGCACGGTGGATCTTCACTGCTCCACGCGCTGCCCGGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR CCA 72 bp CCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTaGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCT +
Preference number: 3 (lower is better)
Translates to: PGPVRGGRAHSR*SVQMVQSSARA
Trigger: AGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR CCA 72 bp CCGAGTGAGGTCACCTGCATGACGCCGGGCAGCGCGTaGAGCAGTGAAGATCCACCGTGCCGCCCCGCACCC +
Preference number: 3 (lower is better)
Translates to: PSEVTCMTPGSA*SSEDPPCRPAP
Trigger: GGGTGCGGGGCGGCACGGTGGATCTTCACTGCTCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCACTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR-3UTR CAA 90 bp CCGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACTCCAGTTCATGTGGTTaGGTCCAGGCCCCGGCCCTG +
Preference number: 3 (lower is better)
Translates to: PGGKPRPLPAGKGHPSPNSSSCG*VQAPAL
Trigger: CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGA...GTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR GCA 72 bp TCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTaGGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTAC +
Preference number: 3 (lower is better)
Translates to: SSSCGLVQAPAL*EAGARTPAGLY
Trigger: GTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR CCA 72 bp GCGGGGGCTGAGGGCGAGGTGAGCGAGACCATCTCCTaGATGGCGAGGCGTAGCTTGAGTCGGTGCAGCGGG +
Preference number: 3 (lower is better)
Translates to: AGAEGEVSETIS*MARRSLSRCSG
Trigger: CCCGCTGCACCGACTCAAGCTACGCCTCGCCATCCAGGAGATGGTCTCGCTCACCTCGCCCTCAGCCCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR TCA 72 bp CCAGGGCGAGCAGTGCCCCGTGTACCCCGCTCTCCGTaGGGTTCGTGGCAAATTCCTTCAGGCCCAGCCCGG +
Preference number: 3 (lower is better)
Translates to: PGRAVPRVPRSP*GSWQIPSGPAR
Trigger: CCGGGCTGGGCCTGAAGGAATTTGCCACGAACCTCACGGAGAGCGGGGTACACGGGGCACTGCTCGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR TCA 72 bp GAACAGCCCAGCCTCGGGAAGATTCTTCCGTCCGAGTaGGGTCACCTGCATGACGCCGGGCAGCGCGTGGAG +
Preference number: 3 (lower is better)
Translates to: EQPSLGKILPSE*GHLHDAGQRVE
Trigger: CTCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCACTCGGACGGAAGAATCTTCCCGAGGCTGGGCTGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR TCA 72 bp TCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTaGAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGT +
Preference number: 3 (lower is better)
Translates to: SPGTSSARMGSG*KTWRCPRPAAC
Trigger: ACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR CCA 72 bp GAGAGCCCAGGGCTCCCGCTGCAGCCGAACGAAAGTTaGGGGGCAACATCTCAGCTGAGTCGGGAGTTACGC +
Preference number: 3 (lower is better)
Translates to: ESPGLPLQPNES*GATSQLSRELR
Trigger: GCGTAACTCCCGACTCAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCTGCAGCGGGAGCCCTGGGCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CAA 90 bp GGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGAAAGGAAAGCGGACGTTaGGGGCGGGATTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: GGKPRPLPAGKGHPSPNRKESGR*GRDFFL
Trigger: GAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTT...TCTGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CAA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCATCCCAGCTGATCTCCTaGGTCTCGGGCTTGGTCGTG +
Preference number: 3 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAASQLIS*VSGLVV
Trigger: CACGACCAAGCCCGAGACCAAGGAGATCAGCTGGGA...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CAA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACACCTGGGCCTGTCAGCTaGGCTAGCCCCAGAGGGTCA +
Preference number: 3 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTPGPVS*ASPRGS
Trigger: TGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGG...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CAA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCATTGTTCCTTCGGTCCTaGTCTCCTGGGCCTGTCAGC +
Preference number: 3 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAALFLRS*SPGPVS
Trigger: GCTGACAGGCCCAGGAGACAAGGACCGAAGGAACAA...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR TCA 72 bp CGGGAAGATTCTTCCGTCCGAGTGAGGTCACCTGCATaGCGCCGGGCAGCGCGTGGAGCAGTGAAGATCCAC +
Preference number: 3 (lower is better)
Translates to: REDSSVRVRSPA*RRAARGAVKIH
Trigger: GTGGATCTTCACTGCTCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCACTCGGACGGAAGAATCTTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR GCA 72 bp GCCTCGGGAAGATTCTTCCGTCCGAGTGAGGTCACCTaGATGACGCCGGGCAGCGCGTGGAGCAGTGAAGAT +
Preference number: 3 (lower is better)
Translates to: ASGRFFRPSEVT*MTPGSAWSSED
Trigger: ATCTTCACTGCTCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCACTCGGACGGAAGAATCTTCCCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602897.1
3UTR GCA 72 bp GCACTAGCAGGAATAGGTCCGGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: ALAGIGPDRNAV*PGTPRSLAFWL
Trigger: CAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACCTATTCCTGCTAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CAA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACATCCGTGTCTGACAGGTaGGCCATGATGGCACCGCTC +
Preference number: 3 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTSVSDR*AMMAPL
Trigger: GAGCGGTGCCATCATGGCCAACCTGTCAGACACGGA...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CAA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATATGGCGAGGCGTAGCTaGAGTCGGTGCAGCGGGTTG +
Preference number: 3 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDMARRS*SRCSGL
Trigger: CAACCCGCTGCACCGACTCAAGCTACGCCTCGCCAT...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR-3UTR CAA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTAAGGAAAGCGGACGTTaGGGGCGGGATTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSKESGR*GRDFFL
Trigger: GAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTT...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR-3UTR CAA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGAGTTCATGCTTCCTCTaGTTCCTTCGGTCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPSSCFL*FLRSLS
Trigger: AGACAAGGACCGAAGGAACAAGAGGAAGCATGAACT...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GAGAGGGGAACCCGCCCGCAGATGACCCGGGGGACCGGCGACCGGACGCGGCGGGGGGCAGCGCGATGCTaGGCTGGCGCTGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: ERGTRPQMTRGTGDRTRRGAARC*AGAAAS
Trigger: ACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCC...CCGCCGCGTCCGGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTCCCCTCTC
77% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCGTTCCTCGGCCTTGTTaGGCGCCGCCACGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QMVQSSARAPPPALPGEAVPRPC*APPRAA
Trigger: CGCAGCGCGTGGCGGCGCTCAACAAGGCCGAGGAAC...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCGAACCCGCCCGCAGATaGCCCGGGGGACCGGCGACC +
Preference number: 4 (lower is better)
Translates to: PALCEAGARTPAGLYRWSEPARR*PGGPAT
Trigger: GGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTC...GGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGAACCCGCCCGCAGATaGCCCGGGGGACCGGCGACC +
Preference number: 4 (lower is better)
Translates to: RPCARRARALPLVCTDGPEPARR*PGGPAT
Trigger: GGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTC...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCGTCCAGGGCGAGCAGTaGCCCGTGTACCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: QMVQSSARAPPPALPGEAVQGEQ*PVYPAL
Trigger: GAGAGCGGGGTACACGGGGCACTGCTCGCCCTGGAC...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCGCTCCCGCAGCTaGCACACCTCGGCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPARRSRS*HTSARC
Trigger: GCAGCGCGCCGAGGTGTGCCAGCTGCGGGAGCGCCT...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GAGAGGGGAACCCGCCCGCAGATGACCCGGGGGACCGGCGACCGGACGCGGCGGAGGCGGGGTGTTGAGTaGCCAGAGCTGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ERGTRPQMTRGTGDRTRRRRGVE*PELGGE
Trigger: CTCCCCTCCCAGCTCTGGCCACTCAACACCCCGCCT...CCGCCGCGTCCGGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTCCCCTCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GAGAGGGGAACCCGCCCGCAGATGACCCGGGGGACCGGCGACCGGACGCGGCGGCACGGTCATGCGCAGTaGCCTCTCGTGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: ERGTRPQMTRGTGDRTRRHGHAQ*PLVPGH
Trigger: GTGTCCAGGCACGAGAGGTCACTGCGCATGACCGTG...CCGCCGCGTCCGGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTCCCCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGGCGCCAGCGCCTCCTTaGGGTCGCGCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPAAPAPP*GRAAAW
Trigger: CCAAGCTGCAGCGCGACCTCAAGGAGGCGCTGGCGC...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCGAACCCGCCCGCAGATaGCCCGGGGGACCGGCGACC +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPEPARR*PGGPAT
Trigger: GGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTC...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTACATCATGGCGGCGGTaGGGGCCTGCCTGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGTSWRR*GPAWSA
Trigger: CGCGGACCAGGCAGGCCCGCACCGCCGCCATGATGT...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS-3UTR GCA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCCTCCTCCTCGAGCACTaGCACGCGCTCCAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: QMVQSSARAPPPALPGEALLLEH*HALQRH
Trigger: ATGGCGCTGGAGCGCGTGGCAGTGCTCGAGGAGGAG...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGAGCGCCGCCACGCGCTaGGCCAGCTGCGCCTCTATC +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGSAATR*ASCASI
Trigger: GATAGAGGCGCAGCTGGCGCAGCGCGTGGCGGCGCT...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCGCCCAGGGCTCCCGCTaGAGCCGAACGAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: QMVQSSARAPPPALPGEAAQGSR*SRTKVG
Trigger: CCCAACTTTCGTTCGGCTGCAGCGGGAGCCCTGGGC...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCGGAATGGGGGTGGTATaGAGCCCGCAGGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: QMVQSSARAPPPALPGEAGMGVV*SPQGQT
Trigger: GGTCTGCCCCTGCGGGCTCCATACCACCCCCATTCC...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGCGTCAGCCTGCCCACTaGGGGACAGCAGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: VQMVQSSARAPPPALPGERQPAH*GTAARP
Trigger: GGGCCGAGCTGCTGTCCCCCAGTGGGCAGGCTGACG...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CCGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACGGGGCAGCGCGATGCTaGGCTGGCGCTGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: PGGKPRPLPAGKGHPSPNGAARC*AGAAAS
Trigger: ACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCC...GTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCGGCTCTTCCAGCCCTaGCCGCCGCCTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGRLFQP*PPPRQL
Trigger: CAGCTGTCTAGGCGGCGGTCAGGGCTGGAAGAGCCG...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp TGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGGGAGGAGGCGGGGGCTaGGGGCGAGGTGAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: CEAGARTPAGLYRWSSPRGGGGG*GRGERD
Trigger: GTCTCGCTCACCTCGCCCTCAGCCCCCGCCTCCTCC...CCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCGGAGGAGGCGGGGGCTaGGGGCGAGGTGAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: ARALPLVCTDGPVLGASSGGGGG*GRGERD
Trigger: GTCTCGCTCACCTCGCCCTCAGCCCCCGCCTCCTCC...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GAGAGGGGAACCCGCCCGCAGATGACCCGGGGGACCGGCGACCGGACGCGGCGGCGGACACCCAACCCATaGCCCGCTCATTGGACCACA +
Preference number: 4 (lower is better)
Translates to: ERGTRPQMTRGTGDRTRRRTPNP*PAHWTT
Trigger: TGTGGTCCAATGAGCGGGTCATGGGTTGGGTGTCCG...CCGCCGCGTCCGGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTCCCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GAGAGGGGAACCCGCCCGCAGATGACCCGGGGGACCGGCGACCGGACGCGGCGGGCTTCACCACGGTCATaGGCAGTGACCTCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: ERGTRPQMTRGTGDRTRRASPRS*AVTSRA
Trigger: GGCACGAGAGGTCACTGCGCATGACCGTGGTGAAGC...CCGCCGCGTCCGGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTCCCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CAGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATTGCCCAGCTCACGGTaGGCGGTGCCCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QAPALCEAGARTPAGLYRLPSSR*AVPNSS
Trigger: GGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAA...TCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GAGAGGGGAACCCGCCCGCAGATGACCCGGGGGACCGGCGACCGGACGCGGCGGAAGCTGCCGGGCCTGTaGATTCTGCGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: ERGTRPQMTRGTGDRTRRKLPGL*ILRGDL
Trigger: CAGATCCCCACGCAGAATGCACAGGCCCGGCAGCTT...CCGCCGCGTCCGGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTCCCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCCAGCCTCTCCCCGCATaGGGCCCGGGAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RALPLVCTDGPVLGASSPQPLPA*GPGGKP
Trigger: GGGCTTCCCTCCCGGGCCGCATGCGGGGAGAGGCTG...GGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTAGCGAGTCCTTCTCGTaGCCGAGCTCGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGSESFS*PSSRSR
Trigger: GCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCT...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp AGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGACCCCACCCGGGGACTaGGCCTGGCGCTTCACCACG +
Preference number: 4 (lower is better)
Translates to: RRARALPLVCTDGPVLGATPPGD*AWRFTT
Trigger: CGTGGTGAAGCGCCAGGCCCAGTCCCCGGGTGGGGT...CGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCCGCGCGCACTCCCGCTaGTCTGTACAGATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QMVQSSARAPPPALPGEARAHSR*SVQMVQ
Trigger: CTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCGCGCCAGCGCCTCCTTaGGGTCGCGCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LVCTDGPVLGASSPARSPAPAPP*GRAAAW
Trigger: CCAAGCTGCAGCGCGACCTCAAGGAGGCGCTGGCGC...GGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACATGGAGGGCTCCTCCTTaGCCCCTGACCAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: REGSPAPFPRVKDTRLPTWRAPP*PLTSGP
Trigger: GGGGCCGCTGGTCAGGGGTCAAGGAGGAGCCCTCCA...TGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp AGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTGCAGCGGGTTGCTaGTGCCGATCTCGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPRPCARRARALPLVCTDGAAGC*CRSRAG
Trigger: TCCAGCGCGAGATCGGCATCAGCAACCCGCTGCACC...ATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTAGCCAACCCGTCCTGTaGCTCGCGCAGCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGSQPVL*LAQRLQ
Trigger: CTGGAGACGCTGCGCGAGGCACAGGACGGGTTGGCT...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGCCCATCCCCATCCTTaGCCGGCTCTTCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RPRPCARRARALPLVCTDAHPHP*PALPAL
Trigger: CAGGGCTGGAAGAGCCGGGCAAGGATGGGGATGGGC...ATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGTGGCTTCCTCTGCCTTaGCCAGCTCACGGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGWLPLP*PAHGAR
Trigger: CCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCA...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCACCAGCGGCCCCTCTTaGCTGCCCGACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: PAGLYRWSSPRRELPRPLTSGPS*LPDHCQ
Trigger: CTGGCAGTGGTCGGGCAGGCAAGAGGGGCCGCTGGT...GAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCAGGGAGCAGCTGCTaGGGTAGCGGCCCAACGAGT +
Preference number: 4 (lower is better)
Translates to: VQMVQSSARAPPPALPGEAGSSC*GSGPTS
Trigger: ACTCGTTGGGCCGCTACCGCAGCAGCTGCTCCCTGC...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCATCCAGGGACCCCGCCTaGAGTGCCAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RPCARRARALPLVCTDGPSRDPA*SAKAWV
Trigger: GACCCAGGCCTTGGCACTGCAGGCGGGGTCCCTGGA...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp ACCACGGTGGGCCCGTCCCAGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGGACCCCGCCTaGAGTGCCAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TTVGPSQAAKGRPWRQASSRDPA*SAKAWV
Trigger: GACCCAGGCCTTGGCACTGCAGGCGGGGTCCCTGGA...GGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCTGGGACGGGCCCACCGTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAAGCGAGTCCTTCTCGTaGCCGAGCTCGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARSESFS*PSSRSR
Trigger: GCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCT...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGAAGCGCGATGCTGAGCTaGCGCTGCAGCGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QAPALCEAGARTPAGLYRSAMLS*RCSESF
Trigger: GAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCT...TCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp TACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCTGCTGTGCGCCGGTTaGAATCCCCGCCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: YRWSSPRRELPRPLSPARLLCAG*NPRQDP
Trigger: TGGGTCCTGGCGGGGATTCCAACCGGCGCACAGCAG...CCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp AGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATCCTGGAGTAGGAGGATaGTGGCCTCCCCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RPRPCARRARALPLVCTDPGVGG*WPPPQL
Trigger: CAGCTGCGGGGGAGGCCACCATCCTCCTACTCCAGG...ATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCGTCAGCCTGCCCACTaGGGGACAGCAGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPRQPAH*GTAARP
Trigger: GGGCCGAGCTGCTGTCCCCCAGTGGGCAGGCTGACG...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGGGTGTCTCCTGGGATaGCCGGCCCCTCCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: REGSPAPFPRVKDTRLPTGCLLG*PAPPLV
Trigger: CACGAGGGGAGGGGCCGGCCATCCCAGGAGACACCC...TGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGGCAAAAGGTAGGCCCTaGCGGCAGGCCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGAKGRP*RQASSR
Trigger: CCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGC...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GAGAGGGGAACCCGCCCGCAGATGACCCGGGGGACCGGCGACCGGACGCGGCGGTCAGTCCAGTTCATGTaGTTTGGTCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ERGTRPQMTRGTGDRTRRSVQFM*FGPGPG
Trigger: GCCGGGGCCTGGACCAAACCACATGAACTGGACTGA...CCGCCGCGTCCGGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTCCCCTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGCACGGTCATGCGCAGTaGCCTCTCGTGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGHGHAQ*PLVPGH
Trigger: GTGTCCAGGCACGAGAGGTCACTGCGCATGACCGTG...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCGGCTCTTCCAGCCCTaGCCGCCGCCTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVRLFQP*PPPRQL
Trigger: CAGCTGTCTAGGCGGCGGTCAGGGCTGGAAGAGCCG...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CCGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACTCCAGCTGGCTCATCTaGCGGCACAGCACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGGKPRPLPAGKGHPSPNSSWLI*RHSTAR
Trigger: CCTGGCGGTGCTGTGCCGTCAGATGAGCCAGCTGGA...GTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCAGCTGGCTCATCTaGCGGCACAGCACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASSSWLI*RHSTAR
Trigger: CCTGGCGGTGCTGTGCCGTCAGATGAGCCAGCTGGA...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGAGTTCCTCGGCCTTGTTaGGCGCCGCCACGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: GGKPRPLPAGKGHPSPNRVPRPC*APPRAA
Trigger: CGCAGCGCGTGGCGGCGCTCAACAAGGCCGAGGAAC...TCTGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCTGCCAGGCGGGGTGTTaGGTGGCCAGAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPCQAGC*VARAGR
Trigger: CCTCCCAGCTCTGGCCACTCAACACCCCGCCTGGCA...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGTTTACCCGTGATCACTaGGTGACGCCTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGFTRDH*VTPGAG
Trigger: CCCCGCCCCAGGCGTCACTCAGTGATCACGGGTAAA...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACACAGCGCGTGGAGCAGTaGAGATCCACCGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: REGSPAPFPRVKDTRLPTQRVEQ*RSTVPP
Trigger: GGGCGGCACGGTGGATCTTCACTGCTCCACGCGCTG...TGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS-3UTR GCA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGCACACCTCGGCGCGCTaGCGCTCCAGGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARHTSAR*RSRASS
Trigger: GGAGGAGGCCCTGGAGCGGCAGCGCGCCGAGGTGTG...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACTGGCTTCCTCTGCCTTaGCCAGCTCACGGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: PGGKPRPLPAGKGHPSPNWLPLP*PAHGAR
Trigger: CCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCA...GTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATTTGTCGTTGGCGTCGTaGAGAGACGTGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RPRPCARRARALPLVCTDLSLAS*RDVASR
Trigger: GCGGGAGGCCACGTCTCTGCACGACGCCAACGACAA...ATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCTCCAGGGACCCCGCCTaGAGTGCCAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LVCTDGPVLGASSPARSPSRDPA*SAKAWV
Trigger: GACCCAGGCCTTGGCACTGCAGGCGGGGTCCCTGGA...GGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CAGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGACGTAGCTTGAGTCGGTaGAGCGGGTTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: QAPALCEAGARTPAGLYRRSLSR*SGLLMP
Trigger: CGGCATCAGCAACCCGCTGCACCGACTCAAGCTACG...TCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGCGTTTCCTGTGGAAGTaGGGGAGGAGGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRARALPLVCTDGPVLGARFLWK*GRRRGL
Trigger: CAGCCCCCGCCTCCTCCCGCACTTCCACAGGAAACG...CGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCGTCCAGGGCGAGCAGTaGCCCGTGTACCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ARALPLVCTDGPVLGASSVQGEQ*PVYPAL
Trigger: GAGAGCGGGGTACACGGGGCACTGCTCGCCCTGGAC...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGCGGGCCTGTGCATTCTaGGTGGGGATCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPARACAF*VGICRS
Trigger: GCTCCTGCAGATCCCCACGCAGAATGCACAGGCCCG...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGGCCCAGGGCTCCCGCTaGAGCCGAACGAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: AGARTPAGLYRWSSPRREAQGSR*SRTKVG
Trigger: CCCAACTTTCGTTCGGCTGCAGCGGGAGCCCTGGGC...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTTCTGGCTGCAGCTTaGGGAGAGGGAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: AGARTPAGLYRWSSPRRELLAAA*GEGAPE
Trigger: CTCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAG...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAAGTGAAGATCCACCGTaGCGCCCCGCACCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RPCARRARALPLVCTDGPSEDPP*RPAPPR
Trigger: CCTTGGGGGTGCGGGGCGGCACGGTGGATCTTCACT...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS-3UTR CCA 90 bp CCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGCGCGATGCTGAGCTaGCGCTGCAGCGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PALCEAGARTPAGLYRWSSAMLS*RCSESF
Trigger: GAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCT...GGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGAGCTGCAGCTTCTGCTTaGCGTCGTCCAACCACTCGG +
Preference number: 4 (lower is better)
Translates to: QAPALCEAGARTPAGLYRAAASA*RRPTTR
Trigger: CCGAGTGGTTGGACGACGCCAAGCAGAAGCTGCAGC...TCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTGGCCTCCCCCGCAGCTaGTCGATCTCCATCTGCATC +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGGLPRS*SISICI
Trigger: GATGCAGATGGAGATCGACCAGCTGCGGGGGAGGCC...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCGGAGTAGGAGGATGGTaGCCTCCCCCGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PAGLYRWSSPRRELPRPLGVGGW*PPPQLV
Trigger: GACCAGCTGCGGGGGAGGCCACCATCCTCCTACTCC...GAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGCAGTTCCCCAGGGAATaGGGGTGGTATGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPAQFPRE*GWYGAR
Trigger: GCGGGCTCCATACCACCCCCATTCCCTGGGGAACTG...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAAGGCGGGGTGTTGAGTaGCCAGAGCTGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARRRGVE*PELGGE
Trigger: CTCCCCTCCCAGCTCTGGCCACTCAACACCCCGCCT...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGATGGTGGGGTGTCTCCTaGGATGGCCGGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GGKPRPLPAGKGHPSPNRWWGVS*DGRPLP
Trigger: GGGGAGGGGCCGGCCATCCCAGGAGACACCCCACCA...TCTGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGCGCGCGCACTCCCGCTaGTCTGTACAGATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGRAHSR*SVQMVQ
Trigger: CTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGCGAAGAAGGAAGACTTaGGCCCCGCGACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGRRRKT*APRLGR
Trigger: CCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCG...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp TGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGTCACTGAGTGACGCCTaGGGCGGGGAGGCCGACCGA +
Preference number: 4 (lower is better)
Translates to: CEAGARTPAGLYRWSSPRSLSDA*GGEADR
Trigger: TCGGTCGGCCTCCCCGCCCCAGGCGTCACTCAGTGA...CCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp TGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGGGGCTGAGGGCGAGGTaGGCGAGACCATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CEAGARTPAGLYRWSSPRGLRAR*ARPSPG
Trigger: TCCAGGAGATGGTCTCGCTCACCTCGCCCTCAGCCC...CCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCGGGCTGAGGGCGAGGTaGGCGAGACCATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVGLRAR*ARPSPG
Trigger: TCCAGGAGATGGTCTCGCTCACCTCGCCCTCAGCCC...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCAGGAGGAGGCGGGGGCTaGGGGCGAGGTGAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAAGGGGG*GRGERD
Trigger: GTCTCGCTCACCTCGCCCTCAGCCCCCGCCTCCTCC...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGGGGCAACATCTCAGCTaGGTCGGGAGTTACGCCTCG +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGGQHLS*VGSYAS
Trigger: CGAGGCGTAACTCCCGACTCAGCTGAGATGTTGCCC...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGAGTGAGGTCACCTGCATaGCGCCGGGCAGCGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GGKPRPLPAGKGHPSPNRVRSPA*RRAARG
Trigger: TCCACGCGCTGCCCGGCGTCATGCAGGTGACCTCAC...TCTGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS-3UTR GCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGACATCATGGCGGCGGTaGGGGCCTGCCTGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWTSWRR*GPAWSA
Trigger: CGCGGACCAGGCAGGCCCGCACCGCCGCCATGATGT...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGATCGCGCAGCCGCAGCTaGGCTGTAGCCAACCCGTCC +
Preference number: 4 (lower is better)
Translates to: GGKPRPLPAGKGHPSPNRSRSRS*AVANPS
Trigger: GGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGCGA...TCTGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGATGCTGAGCTGGCGCTaGAGCGAGTCCTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPAMLSWR*SESFSW
Trigger: CCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCAT...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGATGCTGAGCTGGCGCTaGAGCGAGTCCTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: VQMVQSSARAPPPALPGEMLSWR*SESFSW
Trigger: CCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCAT...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCGCCCATCCCCATCCTTaGCCGGCTCTTCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVAHPHP*PALPAL
Trigger: CAGGGCTGGAAGAGCCGGGCAAGGATGGGGATGGGC...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCCTCCAGCTCTGCTGTaGGCCGGTTGGAATCCCCGC +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVPPALL*AGWNPR
Trigger: GCGGGGATTCCAACCGGCGCACAGCAGAGCTGGAGG...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTTCATCTTCTCCCGCTaGCGGGCCCGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASFIFSR*RARCSS
Trigger: AGAGCTGCAGCGGGCCCGGCAGCGGGAGAAGATGAA...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCGCAGGGAGCAGCTGCTaGGGTAGCGGCCCAACGAGT +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVAGSSC*GSGPTS
Trigger: ACTCGTTGGGCCGCTACCGCAGCAGCTGCTCCCTGC...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACGCAGAGAATCTGGGGTaGCCTCACTTCCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGGKPRPLPAGKGHPSPNAENLG*PHFPVG
Trigger: CCCCACGGGGAAGTGAGGGCACCCCAGATTCTCTGC...GTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCGGGCCTGTGCATTCTaGGTGGGGATCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGARTPAGLYRWSSPRRERACAF*VGICRS
Trigger: GCTCCTGCAGATCCCCACGCAGAATGCACAGGCCCG...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCGTCTGGCCTTCTGGCTaGAGCTTGCGGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASVWPSG*SLRRGS
Trigger: GCTCCCTCTCCGCAAGCTGCAGCCAGAAGGCCAGAC...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGDRNAV*PGTPRS
Trigger: ACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTC...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTAGAGCTGCAAACTCCTaGGGCAGCGCGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGRAANS*GSAMLS
Trigger: GCTCAGCATCGCGCTGCCCCAGGAGTTTGCAGCTCT...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCGGAGTAGGAGGATGGTaGCCTCCCCCGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LVCTDGPVLGASSPARSPGVGGW*PPPQLV
Trigger: GACCAGCTGCGGGGGAGGCCACCATCCTCCTACTCC...GGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCCAGTTCCCCAGGGAATaGGGGTGGTATGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: PAGLYRWSSPRRELPRPLQFPRE*GWYGAR
Trigger: GCGGGCTCCATACCACCCCCATTCCCTGGGGAACTG...GAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGACGCGCGCACTCCCGCTaGTCTGTACAGATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARRAHSR*SVQMVQ
Trigger: CTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp ACCACGGTGGGCCCGTCCCAGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCTCGGATCTGGGTCTaGCTTTCTTCCCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TTVGPSQAAKGRPWRQASSRIWV*LSSRLR
Trigger: GCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGA...GGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCTGGGACGGGCCCACCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAAGGATGGGGAGCGGCTaGAAGACTTGGCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RPCARRARALPLVCTDGPRMGSG*KTWRCP
Trigger: AGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCT...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGGGCAACATCTCAGCTaGGTCGGGAGTTACGCCTCG +
Preference number: 4 (lower is better)
Translates to: RPCARRARALPLVCTDGPGQHLS*VGSYAS
Trigger: CGAGGCGTAACTCCCGACTCAGCTGAGATGTTGCCC...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAATTCTTCCGTCCGAGTaGGGTCACCTGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARILPSE*GHLEAC
Trigger: GCAGGCCTCCAGGTGACCTCACTCGGACGGAAGAAT...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602848.5
CDS-3UTR TCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCATTCTTCCGTCCGAGTaGGGTCACCTGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASILPSE*GHLEAC
Trigger: GCAGGCCTCCAGGTGACCTCACTCGGACGGAAGAAT...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602848.5
CDS-3UTR GCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGTCGCGCAGCCGCAGCTaGGCTGTAGCCAACCCGTCC +
Preference number: 4 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWSRSRS*AVANPS
Trigger: GGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGCGA...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCTTCGTCAGAGCTaGAAACTCCTGGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: AGARTPAGLYRWSSPRRELLRQS*KLLGQR
Trigger: GCGCTGCCCCAGGAGTTTGCAGCTCTGACGAAGGAG...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCATTGGCAAGAGTCTaGCCATCCCCATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGPLARV*PSPSLP
Trigger: GGGCAAGGATGGGGATGGGCAGACTCTTGCCAATGG...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGACACACCTCGGCGCGCTaGCGCTCCAGGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FPLSVQFMWFGPGPGPVRHTSAR*RSRASS
Trigger: GGAGGAGGCCCTGGAGCGGCAGCGCGCCGAGGTGTG...TCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGCACACCTCGGCGCGCTaGCGCTCCAGGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQHTSAR*RSRASS
Trigger: GGAGGAGGCCCTGGAGCGGCAGCGCGCCGAGGTGTG...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp ACCACGGTGGGCCCGTCCCAGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCGGAGTTGGCTTCCTCTaGCTTGCCCAGCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: TTVGPSQAAKGRPWRQASGVGFL*LAQLTV
Trigger: CACCGTGAGCTGGGCAAGGCAGAGGAAGCCAACTCC...GGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCTGGGACGGGCCCACCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGTCCTTGAGGTCGCGCTaGAGCTTGGAGTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPASLRSR*SLELAS
Trigger: GGAAGCCAACTCCAAGCTGCAGCGCGACCTCAAGGA...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCTTGTCGTTGGCGTCGTaGAGAGACGTGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPLSLAS*RDVASR
Trigger: GCGGGAGGCCACGTCTCTGCACGACGCCAACGACAA...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGGTCTGCTGCAGCTTCTaGTTGGCGTCGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPAVCCSF*LASSNH
Trigger: GTGGTTGGACGACGCCAAGCAGAAGCTGCAGCAGAC...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCTTTCTGCAGCGTCTaGTGCAGCTTCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: VQMVQSSARAPPPALPGEAFCSV*CSFCLA
Trigger: CGCCAAGCAGAAGCTGCAGCAGACGCTGCAGAAAGC...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGCTTTCTGCAGCGTCTaGTGCAGCTTCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: RPRPCARRARALPLVCTDAFCSV*CSFCLA
Trigger: CGCCAAGCAGAAGCTGCAGCAGACGCTGCAGAAAGC...ATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCCCCAAACATCCCCTCTaGCTCCTCCTCATCGGAGCC +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASPKHPL*LLLIGA
Trigger: GGCTCCGATGAGGAGGAGGCAGAGGGGATGTTTGGG...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCGCAGAGAATCTGGGGTaGCCTCACTTCCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVAENLG*PHFPVG
Trigger: CCCCACGGGGAAGTGAGGGCACCCCAGATTCTCTGC...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAAAGCTGCCGGGCCTGTaGATTCTGCGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARKLPGL*ILRGDL
Trigger: CAGATCCCCACGCAGAATGCACAGGCCCGGCAGCTT...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGTCCTTCTCCAGAAGCTaGCGGGCCTGTGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPASFSRS*RACAFC
Trigger: GCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGA...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASDRNAV*PGTPRS
Trigger: ACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTC...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp TTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGACAGCCTCTCCCCGCATaGGGCCCGGGAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FPLSVQFMWFGPGPGPVRQPLPA*GPGGKP
Trigger: GGGCTTCCCTCCCGGGCCGCATGCGGGGAGAGGCTG...TCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CAGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGAAAGAGGATTCTCCCATaGAAACCCCGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QAPALCEAGARTPAGLYRKRILP*KPRSQR
Trigger: CCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT...TCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGAGCGAGTCCTTCTCGTaGCCGAGCTCGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWSESFS*PSSRSR
Trigger: GCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCT...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGAGGCGCTCCCGCAGCTaGCACACCTCGGCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQRRSRS*HTSARC
Trigger: GCAGCGCGCCGAGGTGTGCCAGCTGCGGGAGCGCCT...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTGGCCTCCCCCGCAGCTaGTCGATCTCCATCTGCATC +
Preference number: 4 (lower is better)
Translates to: SRWSVQMVQSSARAPPPAGLPRS*SISICI
Trigger: GATGCAGATGGAGATCGACCAGCTGCGGGGGAGGCC...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GAGAGGGGAACCCGCCCGCAGATGACCCGGGGGACCGGCGACCGGACGCGGCGGCACCAGAAGGTAAAGTaGGTGCCTGAGAGTAACGGA +
Preference number: 4 (lower is better)
Translates to: ERGTRPQMTRGTGDRTRRHQKVK*VPESNG
Trigger: TCCGTTACTCTCAGGCACCCACTTTACCTTCTGGTG...CCGCCGCGTCCGGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTCCCCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCACGTCAGCCTGCCCACTaGGGGACAGCAGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAARQPAH*GTAARP
Trigger: GGGCCGAGCTGCTGTCCCCCAGTGGGCAGGCTGACG...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGGGTGTCTCCTGGGATaGCCGGCCCCTCCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCEGCLLG*PAPPLV
Trigger: CACGAGGGGAGGGGCCGGCCATCCCAGGAGACACCC...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGGTGGGGTGTCTCCTaGGATGGCCGGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PLLPPLSPVHVVWSRPRPWWGVS*DGRPLP
Trigger: GGGGAGGGGCCGGCCATCCCAGGAGACACCCCACCA...GGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCATGGTGGGGTGTCTCCTaGGATGGCCGGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAAWWGVS*DGRPLP
Trigger: GGGGAGGGGCCGGCCATCCCAGGAGACACCCCACCA...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCAGAGCTGTCCCGGCCTaGGGGTCCCATTCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVRAVPA*GSHSSL
Trigger: AAGGGACGAATGGGACCCCCAGGCCGGGACAGCTCT...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp ACCACGGTGGGCCCGTCCCAGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCGCCCCAGAGGGTCAGTaGCCAGTGTCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: TTVGPSQAAKGRPWRQASAPEGQ*PVSHLR
Trigger: CCTCAGATGAGACACTGGCCACTGACCCTCTGGGGC...GGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCTGGGACGGGCCCACCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTGGGCCTGTCAGCTTaGCTAGCCCCAGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRWSVQMVQSSARAPPPALGLSA*LAPEGQ
Trigger: CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAG...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp AGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATAGAAGTCTGGCCTTCTaGCTGCAGCTTGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RPRPCARRARALPLVCTDRSLAF*LQLAER
Trigger: CCTCTCCGCAAGCTGCAGCCAGAAGGCCAGACTTCT...ATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCCCGAGTGAGGTCACCTaGAGGCCTGCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAGLYRWSSPRRELPRPLPSEVT*RPALAG
Trigger: TCCTGCTAGTGCAGGCCTCCAGGTGACCTCACTCGG...GAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602848.5
CDS-3UTR CCA 90 bp TACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGTCAGTCCAGTTCATGTaGTTTGGTCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: YRWSSPRRELPRPLSPARSVQFM*FGPGPG
Trigger: GCCGGGGCCTGGACCAAACCACATGAACTGGACTGA...CCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCGAAGAAGGAAGACTTaGGCCCCGCGACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPRRRKT*APRLGR
Trigger: CCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCG...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCGCCTCGGGAAGATTCTaGAGGCCTGCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PALCEAGARTPAGLYRWSASGRF*RPALAG
Trigger: TCCTGCTAGTGCAGGCCTCCAGAATCTTCCCGAGGC...GGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602351.5
CDS-3UTR TCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGGCGCCAGCGCCTCCTTaGGGTCGCGCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPAPAPP*GRAAAW
Trigger: CCAAGCTGCAGCGCGACCTCAAGGAGGCGCTGGCGC...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAAACCACTCGGCCAGCTaGCGGCTCTTCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARNHSAS*RLFSSL
Trigger: GAGTGAAGAGAAGAGCCGTCAGCTGGCCGAGTGGTT...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGGATCTGCTCCCAGCTaGTCTCCTTGGTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RALPLVCTDGPVLGASSPGSAPS*SPWSRA
Trigger: AGCCCGAGACCAAGGAGATCAGCTGGGAGCAGATCC...GGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS-3UTR TCA 90 bp TGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGTCTCGGATCTGGGTCTaGCTTTCTTCCCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: CEAGARTPAGLYRWSSPRSRIWV*LSSRLR
Trigger: GCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGA...CCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCCGGACACCCAACCCATaGCCCGCTCATTGGACCACA +
Preference number: 4 (lower is better)
Translates to: RALPLVCTDGPVLGASSPRTPNP*PAHWTT
Trigger: TGTGGTCCAATGAGCGGGTCATGGGTTGGGTGTCCG...GGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTACCCCGCTCTCCGTaGGGTTCGTGGCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: RPCARRARALPLVCTDGPVPRSP*GSWQIP
Trigger: AGGAATTTGCCACGAACCTCACGGAGAGCGGGGTAC...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp AGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGGTACCCCGCTCTCCGTaGGGTTCGTGGCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: RRARALPLVCTDGPVLGAVPRSP*GSWQIP
Trigger: AGGAATTTGCCACGAACCTCACGGAGAGCGGGGTAC...CGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp TGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGAGGATGGGGAGCGGCTaGAAGACTTGGCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CEAGARTPAGLYRWSSPRRMGSG*KTWRCP
Trigger: AGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCT...CCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGGCCCATCCCCATCCTTaGCCGGCTCTTCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWAHPHP*PALPAL
Trigger: CAGGGCTGGAAGAGCCGGGCAAGGATGGGGATGGGC...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCCTCCAGCTCTGCTGTaGGCCGGTTGGAATCCCCGC +
Preference number: 4 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWPPALL*AGWNPR
Trigger: GCGGGGATTCCAACCGGCGCACAGCAGAGCTGGAGG...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGGCTCACGGTGCGCGGTaGCCAACTCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWAHGAR*PTPPPA
Trigger: AGCTGGAGGAGGAGTTGGGCACCGCGCACCGTGAGC...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCTCCATATCTTCCCGCTaGGCCAGCGCCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVSISSR*ASASLR
Trigger: CCTCAAGGAGGCGCTGGCGCAGCGGGAAGATATGGA...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCTCCATATCTTCCCGCTaGGCCAGCGCCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ARALPLVCTDGPVLGASSSISSR*ASASLR
Trigger: CCTCAAGGAGGCGCTGGCGCAGCGGGAAGATATGGA...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp ACCACGGTGGGCCCGTCCCAGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCGTCTGCTGCAGCTTCTaGTTGGCGTCGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: TTVGPSQAAKGRPWRQASVCCSF*LASSNH
Trigger: GTGGTTGGACGACGCCAAGCAGAAGCTGCAGCAGAC...GGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCTGGGACGGGCCCACCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCACGCGCTGCGCCAGCTaGGCCTCTATCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVTRCAS*ASISGK
Trigger: CTTGCCCGAGATAGAGGCGCAGCTGGCGCAGCGCGT...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTAGCTGGGCCTCCAGCTaGCGAAGCCGCTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SRWSVQMVQSSARAPPPASWASS*RSRSSK
Trigger: TTTTGAGGAGCGGCTTCGGCAGCTGGAGGCCCAGCT...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGAGCTGGGCCTCCAGCTaGCGAAGCCGCTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: CEAGARTPAGLYRWSSPRSWASS*RSRSSK
Trigger: TTTTGAGGAGCGGCTTCGGCAGCTGGAGGCCCAGCT...CCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGTGGTCGATCTCCATCTaGATCCGCTCCATTTCGGCC +
Preference number: 4 (lower is better)
Translates to: YRWSSPRRELPRPLSPARWSISI*IRSISA
Trigger: GGCCGAAATGGAGCGGATGCAGATGGAGATCGACCA...CCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCATGATGGCCAGCGTCTaGACGTCAGCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPMMASV*TSACPL
Trigger: CAGTGGGCAGGCTGACGTGCAGACGCTGGCCATCAT...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCGTCCCTTCTCTTTCTTaGCAAAGAGACGGCCTATGG +
Preference number: 4 (lower is better)
Translates to: QMVQSSARAPPPALPGEAVPSLS*QRDGLW
Trigger: CCATAGGCCGTCTCTTTGGCAAGAAAGAGAAGGGAC...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGTCCAGGGCGAGCAGTaGCCCGTGTACCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCEVQGEQ*PVYPAL
Trigger: GAGAGCGGGGTACACGGGGCACTGCTCGCCCTGGAC...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCTTCTGCGTGGGGATCTaGAGGAGCAAGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPFCVGI*RSKARS
Trigger: CGACCTGGCCTTGCTCCTGCAGATCCCCACGCAGAA...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCCAGCCTCTCCCCGCATaGGGCCCGGGAGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCQPLPA*GPGGKP
Trigger: GGGCTTCCCTCCCGGGCCGCATGCGGGGAGAGGCTG...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTAAGAGGATTCTCCCATaGAAACCCCGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PRPCARRARALPLVCTDGKRILP*KPRSQR
Trigger: CCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCAGAGCTGCAAACTCCTaGGGCAGCGCGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPRAANS*GSAMLS
Trigger: GCTCAGCATCGCGCTGCCCCAGGAGTTTGCAGCTCT...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGACCCCACCCGGGGACTaGGCCTGGCGCTTCACCACG +
Preference number: 4 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPTPPGD*AWRFTT
Trigger: CGTGGTGAAGCGCCAGGCCCAGTCCCCGGGTGGGGT...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp AGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGGCTGCAGCTTGGAGTTaGCTTCCTCTGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RRARALPLVCTDGPVLGAAAAWS*LPLPCP
Trigger: TGGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGC...CGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGTCTCCAGTTTGTCGTTaGCGTCGTGCAGAGACGTGG +
Preference number: 4 (lower is better)
Translates to: VQMVQSSARAPPPALPGESPVCR*RRAETW
Trigger: CCACGTCTCTGCACGACGCCAACGACAAACTGGAGA...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGGCTGTAAGCGCTCGTTaGACTCGCTCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGAVSAR*TRSAAC
Trigger: ACAAGCTGCTGAGCGAGTCCAACGAGCGCTTACAGC...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTTGCCAGGGAGAGACCTaGAGTAGGAGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRWSVQMVQSSARAPPPACQGET*SRRMVA
Trigger: GGCCACCATCCTCCTACTCCAGGTCTCTCCCTGGCA...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CCGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGTCCAAGCCAGAGCTaGACACCCGACTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGGKPRPLPAGKGHPSPNSPSQS*TPDSPA
Trigger: AGCTGGAGAGTCGGGTGTCCAGCTCTGGCTTGGACT...GTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGGCGGGGAGTGGGTGGTaGGGTGTCTCCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: RHVAQRHRGKRILPCKPRAGSGW*GVSWDG
Trigger: GCCATCCCAGGAGACACCCCACCACCCACTCCCCGC...CCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCCTGTGCATTCTGCGTaGGGATCTGCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGARTPAGLYRWSSPRREPVHSA*GSAGAR
Trigger: CCTTGCTCCTGCAGATCCCCACGCAGAATGCACAGG...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGAAGTCTGGCCTTCTaGCTGCAGCTTGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PGGKPRPLPAGKGHPSPNRSLAF*LQLAER
Trigger: CCTCTCCGCAAGCTGCAGCCAGAAGGCCAGACTTCT...GTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp TACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGAGGAAAGCGGACGTTTaGGGCGGGATTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YRWSSPRRELPRPLSPARRKADV*GGISSS
Trigger: GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCT...CCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGCGGGGCGGAGCTGAGTaGCACAGGGGGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPRGGAE*HRGRGL
Trigger: CAAGCCTCGCCCCCTGTGCCACTCAGCTCCGCCCCG...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCAGCACGGTCCTCACCTaGAGGCCTGCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LVCTDGPVLGASSPARSPSTVLT*RPALAG
Trigger: TCCTGCTAGTGCAGGCCTCCAGGTGAGGACCGTGCT...GGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS-3UTR TCA 90 bp CCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGATGGAGGGCTCCTCCTTaGCCCCTGACCAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSGIVERGFSHANPGARGWRAPP*PLTSGP
Trigger: GGGGCCGCTGGTCAGGGGTCAAGGAGGAGCCCTCCA...TCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCATGGCGAGGCGTAGCTTaGGTCGGTGCAGCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAAWRGVA*VGAAGC
Trigger: GCAACCCGCTGCACCGACTCAAGCTACGCCTCGCCA...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCAAGGTCTCCGCTTTCTaGAGCGTCTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASKVSAF*SVCCSF
Trigger: GAAGCTGCAGCAGACGCTGCAGAAAGCGGAGACCTT...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCAGCGCCGCCACGCGCTaGGCCAGCTGCGCCTCTATC +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCSAATR*ASCASI
Trigger: GATAGAGGCGCAGCTGGCGCAGCGCGTGGCGGCGCT...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCACCAGCGGCCCCTCTTaGCTGCCCGACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASTSGPS*LPDHCQ
Trigger: CTGGCAGTGGTCGGGCAGGCAAGAGGGGCCGCTGGT...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGGGGGCAGGGAGCAGCTaGTGCGGTAGCGGCCCAACG +
Preference number: 4 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGGAGSS*CGSGPT
Trigger: CGTTGGGCCGCTACCGCAGCAGCTGCTCCCTGCCCC...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
66% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCGGGGCAGGGAGCAGCTaGTGCGGTAGCGGCCCAACG +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCGAGSS*CGSGPT
Trigger: CGTTGGGCCGCTACCGCAGCAGCTGCTCCCTGCCCC...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCGGACCCCGCCTGCAGTaGCAAGGCCTGGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVGPRLQ*QGLGHS
Trigger: AGAATGACCCAGGCCTTGGCACTGCAGGCGGGGTCC...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGCGGGCCTGTGCATTCTaGGTGGGGATCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARRACAF*VGICRS
Trigger: GCTCCTGCAGATCCCCACGCAGAATGCACAGGCCCG...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCTCCTTCTCCAGAAGCTaGCGGGCCTGTGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: RALPLVCTDGPVLGASSPSFSRS*RACAFC
Trigger: GCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGA...GGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGCTTCTGGCTGCAGCTTaGGGAGAGGGAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: RHVAQRHRGKRILPCKPRLLAAA*GEGAPE
Trigger: CTCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAG...CCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCCTCACCTGGAGGCCTaGACTAGCAGGAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: SRWSVQMVQSSARAPPPAPHLEA*TSRNRS
Trigger: GGACCTATTCCTGCTAGTGCAGGCCTCCAGGTGAGG...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS-3UTR CCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGTCGCTTCGGAGCCCTaGAGCCCTGTCTCCGACGCT +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCEVASEP*SPVSDA
Trigger: AGCGTCGGAGACAGGGCTCCAGGGCTCCGAAGCGAC...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS-3UTR CCA 90 bp AGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGGGCTGCGGGCGGAGCTaGGCTGCAGGAGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: RILPCKPRSQRRRGSAILGCGRS*AAGGTW
Trigger: CCACGTCCCTCCTGCAGCCCAGCTCCGCCCGCAGCC...CAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS-3UTR CCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGTCACCTCGCACATCATaGCGGCGGTGCGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQSPRTS*RRCGPA
Trigger: GGCAGGCCCGCACCGCCGCCATGATGTGCGAGGTGA...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGACCCCACCCGGGGACTaGGCCTGGCGCTTCACCACG +
Preference number: 4 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGTPPGD*AWRFTT
Trigger: CGTGGTGAAGCGCCAGGCCCAGTCCCCGGGTGGGGT...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCACTGCTGTGCGCCGGTTaGAATCCCCGCCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAALLCAG*NPRQDP
Trigger: TGGGTCCTGGCGGGGATTCCAACCGGCGCACAGCAG...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGAGGCGCTCCCGCAGCTaGCACACCTCGGCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PPFGRRRKTWAPRLGRKKRRSRS*HTSARC
Trigger: GCAGCGCGCCGAGGTGTGCCAGCTGCGGGAGCGCCT...CTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTGCTGCAGCTTGGAGTTaGCTTCCTCTGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SRWSVQMVQSSARAPPPAAAAWS*LPLPCP
Trigger: TGGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGC...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGCGTCGTGCAGAGACGTaGCCTCCCGCTGGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: ASSPSQSSSCGLVQAPALRRAET*PPAGRS
Trigger: TGAGCGCCCAGCGGGAGGCCACGTCTCTGCACGACG...CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGCGTCGTGCAGAGACGTaGCCTCCCGCTGGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPRRAET*PPAGRS
Trigger: TGAGCGCCCAGCGGGAGGCCACGTCTCTGCACGACG...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGCCTGGAGTAGGAGGATaGTGGCCTCCCCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RHVAQRHRGKRILPCKPRPGVGG*WPPPQL
Trigger: CAGCTGCGGGGGAGGCCACCATCCTCCTACTCCAGG...CCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCAGTCCAAGCCAGAGCTaGACACCCGACTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARALPLVCTDGPVLGASSSPSQS*TPDSPA
Trigger: AGCTGGAGAGTCGGGTGTCCAGCTCTGGCTTGGACT...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCAGCGAGACCATCTCCTaGATGGCGAGGCGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPSETIS*MARRSL
Trigger: CAAGCTACGCCTCGCCATCCAGGAGATGGTCTCGCT...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCTGTGCATTCTGCGTaGGGATCTGCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPPVHSA*GSAGAR
Trigger: CCTTGCTCCTGCAGATCCCCACGCAGAATGCACAGG...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCCAGCCGAACGAAAGTTaGGGGGCAACATCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASQPNES*GATSQL
Trigger: CAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCTG...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTAGAAGTCTGGCCTTCTaGCTGCAGCTTGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRWSVQMVQSSARAPPPARSLAF*LQLAER
Trigger: CCTCTCCGCAAGCTGCAGCCAGAAGGCCAGACTTCT...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAAGGAAAGCGGACGTTTaGGGCGGGATTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPCARRARALPLVCTDGPRKADV*GGISSS
Trigger: GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCT...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGCCCAGCGGCATCGTaGAAAGAGGATTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: LVCTDGPVLGASSPARSPRPAAS*KEDSPM
Trigger: CATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCG...GGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCGCCCAGCGGCATCGTaGAAAGAGGATTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SRWSVQMVQSSARAPPPARPAAS*KEDSPM
Trigger: CATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCG...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGTCACTGAGTGACGCCTaGGGCGGGGAGGCCGACCGA +
Preference number: 4 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPSLSDA*GGEADR
Trigger: TCGGTCGGCCTCCCCGCCCCAGGCGTCACTCAGTGA...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGGAGACTTTAGAGCTTTaGGCACTTCTACCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPAETLEL*ALLPPR
Trigger: CCTCGGAGGTAGAAGTGCTCAAAGCTCTAAAGTCTC...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGGTTCCTCGGCCTTGTTaGGCGCCGCCACGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLVPRPC*APPRAA
Trigger: CGCAGCGCGTGGCGGCGCTCAACAAGGCCGAGGAAC...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGTGCCAGGCGGGGTGTTaGGTGGCCAGAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGCQAGC*VARAGR
Trigger: CCTCCCAGCTCTGGCCACTCAACACCCCGCCTGGCA...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGGGCCTATGGATGACTTaGTGCTCTTCTTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGARTPAGLYRWSSPRREGLWMT*CSSSWG
Trigger: CCCCCAAGAAGAAGAGCATCAAGTCATCCATAGGCC...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGTGGCGAGGCGTAGCTTaGGTCGGTGCAGCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPWRGVA*VGAAGC
Trigger: GCAACCCGCTGCACCGACTCAAGCTACGCCTCGCCA...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCGGGCTGAGGGCGAGGTaGGCGAGACCATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASGLRAR*ARPSPG
Trigger: TCCAGGAGATGGTCTCGCTCACCTCGCCCTCAGCCC...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGTGTAGACTCACCCTGTaGAAGCTGTCCACCATCTTG +
Preference number: 4 (lower is better)
Translates to: VQMVQSSARAPPPALPGECRLTL*KLSTIL
Trigger: CAAGATGGTGGACAGCTTTCACAGGGTGAGTCTACA...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGAGTACCCCGCTCTCCGTaGGGTTCGTGGCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: GGKPRPLPAGKGHPSPNRVPRSP*GSWQIP
Trigger: AGGAATTTGCCACGAACCTCACGGAGAGCGGGGTAC...TCTGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGAGGATGGGGAGCGGCTaGAAGACTTGGCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARRMGSG*KTWRCP
Trigger: AGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCT...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCAGGATGGGGAGCGGCTaGAAGACTTGGCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVRMGSG*KTWRCP
Trigger: AGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCT...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGGGGCAACATCTCAGCTaGGTCGGGAGTTACGCCTCG +
Preference number: 4 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWGQHLS*VGSYAS
Trigger: CGAGGCGTAACTCCCGACTCAGCTGAGATGTTGCCC...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGAACCCGCCCGCAGATaGCCCGGGGGACCGGCGACC +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFEPARR*PGGPAT
Trigger: GGTCGCCGGTCCCCCGGGTCATCTGCGGGCGGGTTC...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAAGTTCTCTTTACCCGTaGTCACTGAGTGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARSSLYP*SLSDAW
Trigger: CCAGGCGTCACTCAGTGATCACGGGTAAAGAGAACT...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCTCCCTCTCCAGCAGCTaGTCCCGACATAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: ARALPLVCTDGPVLGASSSLSSS*SRHKFS
Trigger: GCTGAACTTATGTCGGGAGCAGCTGCTGGAGAGGGA...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGACTCCTCCTCGAGCACTaGCACGCGCTCCAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: FPLSVQFMWFGPGPGPVRLLLEH*HALQRH
Trigger: ATGGCGCTGGAGCGCGTGGCAGTGCTCGAGGAGGAG...TCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGCTCCTCCTCGAGCACTaGCACGCGCTCCAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQLLLEH*HALQRH
Trigger: ATGGCGCTGGAGCGCGTGGCAGTGCTCGAGGAGGAG...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGTCAGAGTCTCCTGATTaGTCAGTTCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPASESPD*SVPAPP
Trigger: AGGAGGAGCTGGAACTGAGCAATCAGGAGACTCTGA...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGCTCACGGTGCGCGGTaGCCAACTCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FPLSVQFMWFGPGPGPVRAHGAR*PTPPPA
Trigger: AGCTGGAGGAGGAGTTGGGCACCGCGCACCGTGAGC...TCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGAGCGCCGCCACGCGCTaGGCCAGCTGCGCCTCTATC +
Preference number: 4 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLSAATR*ASCASI
Trigger: GATAGAGGCGCAGCTGGCGCAGCGCGTGGCGGCGCT...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCAGCTGGGCCTCCAGCTaGCGAAGCCGCTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVSWASS*RSRSSK
Trigger: TTTTGAGGAGCGGCTTCGGCAGCTGGAGGCCCAGCT...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCACCAGCGGCCCCTCTTaGCTGCCCGACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GKRILPCKPRSQRRRGSATSGPS*LPDHCQ
Trigger: CTGGCAGTGGTCGGGCAGGCAAGAGGGGCCGCTGGT...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCACTCTCCAGCTCCTCTaGCCTCTGTTCTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: RARALPLVCTDGPVLGASTLQLL*PLFCCL
Trigger: GAGACAACAGAACAGAGGGCAGAGGAGCTGGAGAGT...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGGACCCCGCCTGCAGTaGCAAGGCCTGGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCEGPRLQ*QGLGHS
Trigger: AGAATGACCCAGGCCTTGGCACTGCAGGCGGGGTCC...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGCCCAGGGCTCCCGCTaGAGCCGAACGAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPAQGSR*SRTKVG
Trigger: CCCAACTTTCGTTCGGCTGCAGCGGGAGCCCTGGGC...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp TTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGCCCAGGGCTCCCGCTaGAGCCGAACGAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: FPLSVQFMWFGPGPGPVRAQGSR*SRTKVG
Trigger: CCCAACTTTCGTTCGGCTGCAGCGGGAGCCCTGGGC...TCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGCTTCTGGCTGCAGCTTaGGGAGAGGGAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQLLAAA*GEGAPE
Trigger: CTCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAG...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCGTCTGGCCTTCTGGCTaGAGCTTGCGGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLLPPLSPVHVVWSRPRPVWPSG*SLRRGS
Trigger: GCTCCCTCTCCGCAAGCTGCAGCCAGAAGGCCAGAC...GGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp AGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGAAGCTTCTTCATGTTaGCTATCTCCTCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RPRPCARRARALPLVCTDEASSC*LSPRSG
Trigger: CCCTGAGCGAGGAGATAGCCAACATGAAGAAGCTTC...ATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGGGAATGGGGGTGGTATaGAGCCCGCAGGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQGMGVV*SPQGQT
Trigger: GGTCTGCCCCTGCGGGCTCCATACCACCCCCATTCC...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGGGGTGTCTCCTGGGATaGCCGGCCCCTCCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLGCLLG*PAPPLV
Trigger: CACGAGGGGAGGGGCCGGCCATCCCAGGAGACACCC...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGGCAAAAGGTAGGCCCTaGCGGCAGGCCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQAKGRP*RQASSR
Trigger: CCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGC...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACATTCCCCACCCACTCGTaGTTCATGTCGCCATATGCC +
Preference number: 4 (lower is better)
Translates to: REGSPAPFPRVKDTRLPTFPTHS*FMSPYA
Trigger: GGCATATGGCGACATGAACCACGAGTGGGTGGGGAA...TGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
CDS-3UTR CCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCAGCCGAACGAAAGTTaGGGGGCAACATCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVQPNES*GATSQL
Trigger: CAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCTG...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCCCGAGTGAGGTCACCTaGAGGCCTGCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVPSEVT*RPALAG
Trigger: TCCTGCTAGTGCAGGCCTCCAGGTGACCTCACTCGG...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCCGAAGAAGGAAGACTTaGGCCCCGCGACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLPPLSPVHVVWSRPRPRRRKT*APRLGR
Trigger: CCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCG...GGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GGGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTCGGGGCGGAGCTGAGTaGCACAGGGGGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRDFFLPASSPSQSSSCGRGGAE*HRGRGL
Trigger: CAAGCCTCGCCCCCTGTGCCACTCAGCTCCGCCCCG...ACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTCGGGGCGGAGCTGAGTaGCACAGGGGGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSRGGAE*HRGRGL
Trigger: CAAGCCTCGCCCCCTGTGCCACTCAGCTCCGCCCCG...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGTCACTGAGTGACGCCTaGGGCGGGGAGGCCGACCGA +
Preference number: 4 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGSLSDA*GGEADR
Trigger: TCGGTCGGCCTCCCCGCCCCAGGCGTCACTCAGTGA...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGCCGGCCATCCTCGCTaGTGGTGGGCATCACCTCGC +
Preference number: 4 (lower is better)
Translates to: LLSDEEGRLGPRDWAGKRAGHPR*WWASPR
Trigger: GCGAGGTGATGCCCACCATCAGCGAGGATGGCCGGC...CCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTGCCGGCCATCCTCGCTaGTGGTGGGCATCACCTCGC +
Preference number: 4 (lower is better)
Translates to: GRDFFLPASSPSQSSSCGAGHPR*WWASPR
Trigger: GCGAGGTGATGCCCACCATCAGCGAGGATGGCCGGC...ACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGGCCGGCCATCCTCGCTaGTGGTGGGCATCACCTCGC +
Preference number: 4 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLAGHPR*WWASPR
Trigger: GCGAGGTGATGCCCACCATCAGCGAGGATGGCCGGC...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp CTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCGGCCTATGGATGACTTaGTGCTCTTCTTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVCTDGPVLGASSPARSPGLWMT*CSSSWG
Trigger: CCCCCAAGAAGAAGAGCATCAAGTCATCCATAGGCC...GGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCCTGGATCTCCGTGTCTaGCAGGTTGGCCATGATGGC +
Preference number: 4 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVLDLRV*QVGHDG
Trigger: GCCATCATGGCCAACCTGTCAGACACGGAGATCCAG...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp CCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCGGGCAACATCTCAGCTaGGTCGGGAGTTACGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLLPPLSPVHVVWSRPRPGQHLS*VGSYAS
Trigger: CGAGGCGTAACTCCCGACTCAGCTGAGATGTTGCCC...GGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAAGTTCTCTTTACCCGTaGTCACTGAGTGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: REGSPAPFPRVKDTRLPTSSLYP*SLSDAW
Trigger: CCAGGCGTCACTCAGTGATCACGGGTAAAGAGAACT...TGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCAGCTTCACCACGGTCATaGGCAGTGACCTCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAAASPRS*AVTSRA
Trigger: GGCACGAGAGGTCACTGCGCATGACCGTGGTGAAGC...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCGCTCACGGTGCGCGGTaGCCAACTCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GKRILPCKPRSQRRRGSAAHGAR*PTPPPA
Trigger: AGCTGGAGGAGGAGTTGGGCACCGCGCACCGTGAGC...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGGAGTTGGCTTCCTCTaGCTTGCCCAGCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCEGVGFL*LAQLTV
Trigger: CACCGTGAGCTGGGCAAGGCAGAGGAAGCCAACTCC...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCTTCATCTTCTCCCGCTaGCGGGCCCGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASFIFSR*RARCSS
Trigger: AGAGCTGCAGCGGGCCCGGCAGCGGGAGAAGATGAA...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCACTCTCCAGCTCCTCTaGCCTCTGTTCTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPTLQLL*PLFCCL
Trigger: GAGACAACAGAACAGAGGGCAGAGGAGCTGGAGAGT...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCGCAGAGAATCTGGGGTaGCCTCACTTCCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASAENLG*PHFPVG
Trigger: CCCCACGGGGAAGTGAGGGCACCCCAGATTCTCTGC...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTTCTGCGTGGGGATCTaGAGGAGCAAGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PLLPPLSPVHVVWSRPRPFCVGI*RSKARS
Trigger: CGACCTGGCCTTGCTCCTGCAGATCCCCACGCAGAA...GGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAAGCTGCCGGGCCTGTaGATTCTGCGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: RHVAQRHRGKRILPCKPRKLPGL*ILRGDL
Trigger: CAGATCCCCACGCAGAATGCACAGGCCCGGCAGCTT...CCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGTTCATGTCGCCATATaGCAGGATGGGCTTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RALPLVCTDGPVLGASSPVHVAI*QDGLGR
Trigger: ACGACCAAGCCCATCCTGGCATATGGCGACATGAAC...GGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602351.5
ENST00000602848.5
CDS-3UTR CCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCGGCTGCGGGCGGAGCTaGGCTGCAGGAGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSGCGRS*AAGGTW
Trigger: CCACGTCCCTCCTGCAGCCCAGCTCCGCCCGCAGCC...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTTCACCTCGCACATCATaGCGGCGGTGCGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSSPRTS*RRCGPA
Trigger: GGCAGGCCCGCACCGCCGCCATGATGTGCGAGGTGA...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS-3UTR CCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGAGCGCGATGCTGAGCTaGCGCTGCAGCGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQSAMLS*RCSESF
Trigger: GAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCT...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCCTGCTGTGCGCCGGTTaGAATCCCCGCCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCLLCAG*NPRQDP
Trigger: TGGGTCCTGGCGGGGATTCCAACCGGCGCACAGCAG...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGCGTCGTGCAGAGACGTaGCCTCCCGCTGGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LLSDEEGRLGPRDWAGKRRRAET*PPAGRS
Trigger: TGAGCGCCCAGCGGGAGGCCACGTCTCTGCACGACG...CCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGGGCCTCCCCCGCAGCTaGTCGATCTCCATCTGCATC +
Preference number: 4 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPGLPRS*SISICI
Trigger: GATGCAGATGGAGATCGACCAGCTGCGGGGGAGGCC...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGGAATGGGGGTGGTATaGAGCCCGCAGGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: PSGIVERGFSHANPGARGGMGVV*SPQGQT
Trigger: GGTCTGCCCCTGCGGGCTCCATACCACCCCCATTCC...TCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCGGGGAGTGGGTGGTaGGGTGTCTCCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSAGSGW*GVSWDG
Trigger: GCCATCCCAGGAGACACCCCACCACCCACTCCCCGC...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACAGCGGGGAGTGGGTGGTaGGGTGTCTCCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTAGSGW*GVSWDG
Trigger: GCCATCCCAGGAGACACCCCACCACCCACTCCCCGC...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGACTGGGCCTGTCAGCTTaGCTAGCCCCAGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FPLSVQFMWFGPGPGPVRLGLSA*LAPEGQ
Trigger: CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAG...TCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCGCAAAAGGTAGGCCCTaGCGGCAGGCCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GKRILPCKPRSQRRRGSAAKGRP*RQASSR
Trigger: CCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGC...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: RHVAQRHRGKRILPCKPRAGLYR*SSPRRE
Trigger: CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGC...CCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp AGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGTCACTGAGTGACGCCTaGGGCGGGGAGGCCGACCGA +
Preference number: 4 (lower is better)
Translates to: RILPCKPRSQRRRGSAILSLSDA*GGEADR
Trigger: TCGGTCGGCCTCCCCGCCCCAGGCGTCACTCAGTGA...CAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCACGCCGGGCAGCGCGTaGAGCAGTGAAGATCCACCG +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCTPGSA*SSEDPP
Trigger: CGGTGGATCTTCACTGCTCCACGCGCTGCCCGGCGT...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS-3UTR TCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATCGGCTCTTCCAGCCCTaGCCGCCGCCTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNRLFQP*PPPRQL
Trigger: CAGCTGTCTAGGCGGCGGTCAGGGCTGGAAGAGCCG...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCTGCAAACCACTCGGCCAGCTaGCGGCTCTTCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: GPKRRLPGNSQKSGLLAANHSAS*RLFSSL
Trigger: GAGTGAAGAGAAGAGCCGTCAGCTGGCCGAGTGGTT...TGCAGCCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCTGGAGGGCTCCTCCTTaGCCCCTGACCAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSWRAPP*PLTSGP
Trigger: GGGGCCGCTGGTCAGGGGTCAAGGAGGAGCCCTCCA...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACAGGTGCAGCGGGTTGCTaGTGCCGATCTCGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTGAAGC*CRSRAG
Trigger: TCCAGCGCGAGATCGGCATCAGCAACCCGCTGCACC...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGGGATCTGCTCCCAGCTaGTCTCCTTGGTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPGSAPS*SPWSRA
Trigger: AGCCCGAGACCAAGGAGATCAGCTGGGAGCAGATCC...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GGGACACGAGACACGGGGGAGGGAGAGGGGAACCCGCCCGCAGATGACCCGGGGTCCTTCTTGTTAAGGTaGTCTAACATTCGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: GTRDTGEGEGNPPADDPGSFLLR*SNIRAS
Trigger: GGACGCTCGAATGTTAGATCACCTTAACAAGAAGGA...CCCCGGGTCATCTGCGGGCGGGTTCCCCTCTCCCTCCCCCGTGTCTCGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGTCCTTCTTGTTAAGGTaGTCTAACATTCGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LYRWSSPRRELPRPLSPASFLLR*SNIRAS
Trigger: GGACGCTCGAATGTTAGATCACCTTAACAAGAAGGA...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACATGTAGACTCACCCTGTaGAAGCTGTCCACCATCTTG +
Preference number: 4 (lower is better)
Translates to: REGSPAPFPRVKDTRLPTCRLTL*KLSTIL
Trigger: CAAGATGGTGGACAGCTTTCACAGGGTGAGTCTACA...TGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGATTCTTCCGTCCGAGTaGGGTCACCTGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQILPSE*GHLEAC
Trigger: GCAGGCCTCCAGGTGACCTCACTCGGACGGAAGAAT...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGAGCCAACCCGTCCTGTaGCTCGCGCAGCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLSQPVL*LAQRLQ
Trigger: CTGGAGACGCTGCGCGAGGCACAGGACGGGTTGGCT...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCTCAGAGTCTCCTGATTaGTCAGTTCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARALPLVCTDGPVLGASSSESPD*SVPAPP
Trigger: AGGAGGAGCTGGAACTGAGCAATCAGGAGACTCTGA...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGTGGCTTCCTCTGCCTTaGCCAGCTCACGGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLWLPLP*PAHGAR
Trigger: CCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCA...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGTCCTTGAGGTCGCGCTaGAGCTTGGAGTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCESLRSR*SLELAS
Trigger: GGAAGCCAACTCCAAGCTGCAGCGCGACCTCAAGGA...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCGTCTGCTGCAGCTTCTaGTTGGCGTCGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: PLLPPLSPVHVVWSRPRPVCCSF*LASSNH
Trigger: GTGGTTGGACGACGCCAAGCAGAAGCTGCAGCAGAC...GGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCTGCCTGCCCGACCACTaGCAGCCACATAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASCLPDH*QPHRDP
Trigger: TGGATCCCTATGTGGCTGGCAGTGGTCGGGCAGGCA...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGATGATGGCCAGCGTCTaGACGTCAGCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPMMASV*TSACPL
Trigger: CAGTGGGCAGGCTGACGTGCAGACGCTGGCCATCAT...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGGGACCCCGCCTGCAGTaGCAAGGCCTGGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGGPRLQ*QGLGHS
Trigger: AGAATGACCCAGGCCTTGGCACTGCAGGCGGGGTCC...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCCGTAGCTTGAGTCGGTaGAGCGGGTTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASRSLSR*SGLLMP
Trigger: CGGCATCAGCAACCCGCTGCACCGACTCAAGCTACG...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGCGTTTCCTGTGGAAGTaGGGGAGGAGGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPFGRRRKTWAPRLGRKKRFLWK*GRRRGL
Trigger: CAGCCCCCGCCTCCTCCCGCACTTCCACAGGAAACG...CTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTTCTGCGTGGGGATCTaGAGGAGCAAGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: ASSPSQSSSCGLVQAPALFCVGI*RSKARS
Trigger: CGACCTGGCCTTGCTCCTGCAGATCCCCACGCAGAA...CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGAGTCTGGCCTTCTGGCTaGAGCTTGCGGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERVWPSG*SLRRGS
Trigger: GCTCCCTCTCCGCAAGCTGCAGCCAGAAGGCCAGAC...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ASSPSQSSSCGLVQAPALDRNAV*PGTPRS
Trigger: ACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTC...CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp TTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FPLSVQFMWFGPGPGPVRDRNAV*PGTPRS
Trigger: ACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTC...TCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCGGTCGCGCTGCAGCTTaGAGTTGGCTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASGRAAA*SWLPLP
Trigger: AGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACC...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCTCTCCAGTTTGTCGTTaGCGTCGTGCAGAGACGTGG +
Preference number: 4 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVSPVCR*RRAETW
Trigger: CCACGTCTCTGCACGACGCCAACGACAAACTGGAGA...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCGAAGCTTCTTCATGTTaGCTATCTCCTCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PCARRARALPLVCTDGPVEASSC*LSPRSG
Trigger: CCCTGAGCGAGGAGATAGCCAACATGAAGAAGCTTC...GACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGTGCCAGGGAGAGACCTaGAGTAGGAGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPCQGET*SRRMVA
Trigger: GGCCACCATCCTCCTACTCCAGGTCTCTCCCTGGCA...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGTTCCCCACCCACTCGTaGTTCATGTCGCCATATGCC +
Preference number: 4 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWFPTHS*FMSPYA
Trigger: GGCATATGGCGACATGAACCACGAGTGGGTGGGGAA...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: FPLSVQFMWFGPGPGPVRAGLYR*SSPRRE
Trigger: CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGC...TCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGAGGAAAGCGGACGTTTaGGGCGGGATTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARRKADV*GGISSS
Trigger: GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCT...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCAGCAGCAACTCATCCTaGAGCTTCTTCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RALPLVCTDGPVLGASSPSSNSS*SFFMLA
Trigger: AGCCAACATGAAGAAGCTTCAGGATGAGTTGCTGCT...GGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp AAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTTGGCGAGGCGTAGCTTaGGTCGGTGCAGCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: KRILPCKPRSQRRRGSAIWRGVA*VGAAGC
Trigger: GCAACCCGCTGCACCGACTCAAGCTACGCCTCGCCA...AATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACAGATGTAGACTCACCCTGTaGAAGCTGTCCACCATCTTG +
Preference number: 4 (lower is better)
Translates to: GGKPRPLPAGKGHPSPNRCRLTL*KLSTIL
Trigger: CAAGATGGTGGACAGCTTTCACAGGGTGAGTCTACA...TCTGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCCGGACACCCAACCCATaGCCCGCTCATTGGACCACA +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCRTPNP*PAHWTT
Trigger: TGTGGTCCAATGAGCGGGTCATGGGTTGGGTGTCCG...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCGTACCCCGCTCTCCGTaGGGTTCGTGGCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASVPRSP*GSWQIP
Trigger: AGGAATTTGCCACGAACCTCACGGAGAGCGGGGTAC...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCAGGATGGGGAGCGGCTaGAAGACTTGGCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GKRILPCKPRSQRRRGSARMGSG*KTWRCP
Trigger: AGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCT...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGTTTACCCGTGATCACTaGGTGACGCCTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LLSDEEGRLGPRDWAGKRFTRDH*VTPGAG
Trigger: CCCCGCCCCAGGCGTCACTCAGTGATCACGGGTAAA...CCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTAGCCAACCCGTCCTGTaGCTCGCGCAGCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVSQPVL*LAQRLQ
Trigger: CTGGAGACGCTGCGCGAGGCACAGGACGGGTTGGCT...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTTCGCGCAGCCGCAGCTaGGCTGTAGCCAACCCGTCC +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFSRSRS*AVANPS
Trigger: GGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGCGA...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGAATGCTGAGCTGGCGCTaGAGCGAGTCCTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERMLSWR*SESFSW
Trigger: CCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCAT...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCCTCCTTCGTCAGAGCTaGAAACTCCTGGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCLLRQS*KLLGQR
Trigger: GCGCTGCCCCAGGAGTTTGCAGCTCTGACGAAGGAG...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGTCCCTCTCCAGCAGCTaGTCCCGACATAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCESLSSS*SRHKFS
Trigger: GCTGAACTTATGTCGGGAGCAGCTGCTGGAGAGGGA...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTTTGCCCAGCTCACGGTaGGCGGTGCCCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: KRILPCKPRSQRRRGSAILPSSR*AVPNSS
Trigger: GGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAA...AATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GTCGTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGTTGCCCAGCTCACGGTaGGCGGTGCCCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVAVRDSISSCVIHTFPVLPSSR*AVPNSS
Trigger: GGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAA...CACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGATCCATATCTTCCCGCTaGGCCAGCGCCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERSISSR*ASASLR
Trigger: CCTCAAGGAGGCGCTGGCGCAGCGGGAAGATATGGA...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACATTGTCGTTGGCGTCGTaGAGAGACGTGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTLSLAS*RDVASR
Trigger: GCGGGAGGCCACGTCTCTGCACGACGCCAACGACAA...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTACGCGCTGCGCCAGCTaGGCCTCTATCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVTRCAS*ASISGK
Trigger: CTTGCCCGAGATAGAGGCGCAGCTGGCGCAGCGCGT...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp CCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGATGCCTGCCCGACCACTaGCAGCCACATAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: PSGIVERGFSHANPGARGCLPDH*QPHRDP
Trigger: TGGATCCCTATGTGGCTGGCAGTGGTCGGGCAGGCA...TCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GTCGTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGCGTTTCCTGTGGAAGTaGGGGAGGAGGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VVAVRDSISSCVIHTFPVRFLWK*GRRRGL
Trigger: CAGCCCCCGCCTCCTCCCGCACTTCCACAGGAAACG...CACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTCCTTCTCCAGAAGCTaGCGGGCCTGTGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: ASSPSQSSSCGLVQAPALSFSRS*RACAFC
Trigger: GCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGA...CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GTCGTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGGCCCAGGGCTCCCGCTaGAGCCGAACGAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: VVAVRDSISSCVIHTFPVAQGSR*SRTKVG
Trigger: CCCAACTTTCGTTCGGCTGCAGCGGGAGCCCTGGGC...CACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGGTCACCTGGAGGCCTaGACTAGCAGGAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPGHLEA*TSRNRS
Trigger: GGACCTATTCCTGCTAGTGCAGGCCTCCAGGTGACC...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602848.5
CDS-3UTR CCA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATGGAGTAGGAGGATGGTaGCCTCCCCCGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDGVGGW*PPPQLV
Trigger: GACCAGCTGCGGGGGAGGCCACCATCCTCCTACTCC...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATCCTGGAGTAGGAGGATaGTGGCCTCCCCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDPGVGG*WPPPQL
Trigger: CAGCTGCGGGGGAGGCCACCATCCTCCTACTCCAGG...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACAAGAGCTGTCCCGGCCTaGGGGTCCCATTCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTRAVPA*GSHSSL
Trigger: AAGGGACGAATGGGACCCCCAGGCCGGGACAGCTCT...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGAGCGAGACCATCTCCTaGATGGCGAGGCGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQSETIS*MARRSL
Trigger: CAAGCTACGCCTCGCCATCCAGGAGATGGTCTCGCT...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GGGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTCGCGCGCACTCCCGCTaGTCTGTACAGATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GRDFFLPASSPSQSSSCGRAHSR*SVQMVQ
Trigger: CTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG...ACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGTCAGTCCAGTTCATGTaGTTTGGTCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPSVQFM*FGPGPG
Trigger: GCCGGGGCCTGGACCAAACCACATGAACTGGACTGA...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTCGAAGAAGGAAGACTTaGGCCCCGCGACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSRRRKT*APRLGR
Trigger: CCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCG...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCGGGGCGGAGCTGAGTaGCACAGGGGGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVRGGAE*HRGRGL
Trigger: CAAGCCTCGCCCCCTGTGCCACTCAGCTCCGCCCCG...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GTCGTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGCACGGTCATGCGCAGTaGCCTCTCGTGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: VVAVRDSISSCVIHTFPVHGHAQ*PLVPGH
Trigger: GTGTCCAGGCACGAGAGGTCACTGCGCATGACCGTG...CACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGAGGTTCAGAGTCTCCTaGTTGCTCAGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCERFRVS*LLSSSS
Trigger: GGAGCTGGAACTGAGCAATCAGGAGACTCTGAACCT...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGGAATCCAGCTGGCTCATCTaGCGGCACAGCACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VAVRDSISSCVIHTFPVESSWLI*RHSTAR
Trigger: CCTGGCGGTGCTGTGCCGTCAGATGAGCCAGCTGGA...TTCCACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGCCCCCATGCGCTCCTTaGGGTGAAGCTGTAAGCGCT +
Preference number: 4 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLPPCAP*GEAVSA
Trigger: AGCGCTTACAGCTTCACCTCAAGGAGCGCATGGGGG...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGTGTAGACTCACCCTGTaGAAGCTGTCCACCATCTTG +
Preference number: 4 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARCRLTL*KLSTIL
Trigger: CAAGATGGTGGACAGCTTTCACAGGGTGAGTCTACA...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGCGGACACCCAACCCATaGCCCGCTCATTGGACCACA +
Preference number: 4 (lower is better)
Translates to: LLSDEEGRLGPRDWAGKRRTPNP*PAHWTT
Trigger: TGTGGTCCAATGAGCGGGTCATGGGTTGGGTGTCCG...CCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACACGGACACCCAACCCATaGCCCGCTCATTGGACCACA +
Preference number: 4 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTRTPNP*PAHWTT
Trigger: TGTGGTCCAATGAGCGGGTCATGGGTTGGGTGTCCG...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp AGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGGGGCAACATCTCAGCTaGGTCGGGAGTTACGCCTCG +
Preference number: 4 (lower is better)
Translates to: RILPCKPRSQRRRGSAILGQHLS*VGSYAS
Trigger: CGAGGCGTAACTCCCGACTCAGCTGAGATGTTGCCC...CAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTACGCGCTGCGCCAGCTaGGCCTCTATCTCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFTRCAS*ASISGK
Trigger: CTTGCCCGAGATAGAGGCGCAGCTGGCGCAGCGCGT...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTCCCAAACATCCCCTCTaGCTCCTCCTCATCGGAGCC +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSPKHPL*LLLIGA
Trigger: GGCTCCGATGAGGAGGAGGCAGAGGGGATGTTTGGG...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGCCCAAACATCCCCTCTaGCTCCTCCTCATCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLPKHPL*LLLIGA
Trigger: GGCTCCGATGAGGAGGAGGCAGAGGGGATGTTTGGG...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGGTCCCTTCTCTTTCTTaGCAAAGAGACGGCCTATGG +
Preference number: 4 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARVPSLS*QRDGLW
Trigger: CCATAGGCCGTCTCTTTGGCAAGAAAGAGAAGGGAC...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCGTAGCTTGAGTCGGTaGAGCGGGTTGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: RILPCKPRSQRRRGSAILRSLSR*SGLLMP
Trigger: CGGCATCAGCAACCCGCTGCACCGACTCAAGCTACG...CAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTGTCCAGGGCGAGCAGTaGCCCGTGTACCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GFLPPRFFPLSVQFMWFGVQGEQ*PVYPAL
Trigger: GAGAGCGGGGTACACGGGGCACTGCTCGCCCTGGAC...ACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGTTCTGCGTGGGGATCTaGAGGAGCAAGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLFCVGI*RSKARS
Trigger: CGACCTGGCCTTGCTCCTGCAGATCCCCACGCAGAA...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTTTCTGCGTGGGGATCTaGAGGAGCAAGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSFCVGI*RSKARS
Trigger: CGACCTGGCCTTGCTCCTGCAGATCCCCACGCAGAA...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp CCTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGAAGCTGCCGGGCCTGTaGATTCTGCGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: PPFGRRRKTWAPRLGRKKKLPGL*ILRGDL
Trigger: CAGATCCCCACGCAGAATGCACAGGCCCGGCAGCTT...CTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp AAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTGTCTGGCCTTCTGGCTaGAGCTTGCGGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KRILPCKPRSQRRRGSAIVWPSG*SLRRGS
Trigger: GCTCCCTCTCCGCAAGCTGCAGCCAGAAGGCCAGAC...AATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCGGTCACCTGGAGGCCTaGACTAGCAGGAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCGHLEA*TSRNRS
Trigger: GGACCTATTCCTGCTAGTGCAGGCCTCCAGGTGACC...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602848.5
CDS-3UTR GCA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGAAGAGGATTCTCCCATaGAAACCCCGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPKRILP*KPRSQR
Trigger: CCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGAAGAGGATTCTCCCATaGAAACCCCGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ASSPSQSSSCGLVQAPALKRILP*KPRSQR
Trigger: CCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT...CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGGTCGCGCTGCAGCTTaGAGTTGGCTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSGRAAA*SWLPLP
Trigger: AGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACC...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTTGCCAGGGAGAGACCTaGAGTAGGAGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSCQGET*SRRMVA
Trigger: GGCCACCATCCTCCTACTCCAGGTCTCTCCCTGGCA...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTAGAGCTGTCCCGGCCTaGGGGTCCCATTCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVRAVPA*GSHSSL
Trigger: AAGGGACGAATGGGACCCCCAGGCCGGGACAGCTCT...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CCTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGCCCCAGAGGGTCAGTaGCCAGTGTCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: PPFGRRRKTWAPRLGRKKAPEGQ*PVSHLR
Trigger: CCTCAGATGAGACACTGGCCACTGACCCTCTGGGGC...CTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GTCGTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGCTGGGCCTGTCAGCTTaGCTAGCCCCAGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VVAVRDSISSCVIHTFPVLGLSA*LAPEGQ
Trigger: CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAG...CACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGAGCGAGACCATCTCCTaGATGGCGAGGCGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGSETIS*MARRSL
Trigger: CAAGCTACGCCTCGCCATCCAGGAGATGGTCTCGCT...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSAGLYR*SSPRRE
Trigger: CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGC...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGACGCCCAGCGGCATCGTaGAAAGAGGATTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: PSGIVERGFSHANPGARGRPAAS*KEDSPM
Trigger: CATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCG...TCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp CTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGAACCACTCGGCCAGCTaGCGGCTCTTCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LLSDEEGRLGPRDWAGKRNHSAS*RLFSSL
Trigger: GAGTGAAGAGAAGAGCCGTCAGCTGGCCGAGTGGTT...CCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCGGTGCAGCGGGTTGCTaGTGCCGATCTCGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVGAAGC*CRSRAG
Trigger: TCCAGCGCGAGATCGGCATCAGCAACCCGCTGCACC...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTTTTACCCGTGATCACTaGGTGACGCCTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFFTRDH*VTPGAG
Trigger: CCCCGCCCCAGGCGTCACTCAGTGATCACGGGTAAA...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GTCGTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGCTCCTTCGTCAGAGCTaGAAACTCCTGGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: VVAVRDSISSCVIHTFPVLLRQS*KLLGQR
Trigger: GCGCTGCCCCAGGAGTTTGCAGCTCTGACGAAGGAG...CACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTCCATTGGCAAGAGTCTaGCCATCCCCATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSPLARV*PSPSLP
Trigger: GGGCAAGGATGGGGATGGGCAGACTCTTGCCAATGG...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGCCATTGGCAAGAGTCTaGCCATCCCCATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLPLARV*PSPSLP
Trigger: GGGCAAGGATGGGGATGGGCAGACTCTTGCCAATGG...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCAAGGTCTCCGCTTTCTaGAGCGTCTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GKRILPCKPRSQRRRGSAKVSAF*SVCCSF
Trigger: GAAGCTGCAGCAGACGCTGCAGAAAGCGGAGACCTT...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCGTTCATGTCGCCATATaGCAGGATCTGCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASVHVAI*QDLLPA
Trigger: AGCTGGGAGCAGATCCTGGCATATGGCGACATGAAC...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCCGGGCCTGTGCATTCTaGGTGGGGATCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSRACAF*VGICRS
Trigger: GCTCCTGCAGATCCCCACGCAGAATGCACAGGCCCG...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GTCGTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGAAGCTGCCGGGCCTGTaGATTCTGCGTGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: VVAVRDSISSCVIHTFPVKLPGL*ILRGDL
Trigger: CAGATCCCCACGCAGAATGCACAGGCCCGGCAGCTT...CACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACATCCTTCTCCAGAAGCTaGCGGGCCTGTGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTSFSRS*RACAFC
Trigger: GCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGA...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGTCCTTCTCCAGAAGCTaGCGGGCCTGTGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: LLSDEEGRLGPRDWAGKRSFSRS*RACAFC
Trigger: GCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGA...CCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCTTCTGGCTGCAGCTTaGGGAGAGGGAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: GFLPPRFFPLSVQFMWFGLLAAA*GEGAPE
Trigger: CTCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAG...ACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGTCTGGCCTTCTGGCTaGAGCTTGCGGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFVWPSG*SLRRGS
Trigger: GCTCCCTCTCCGCAAGCTGCAGCCAGAAGGCCAGAC...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNDRNAV*PGTPRS
Trigger: ACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTC...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGAAGATTCTGGAGGCCTaGACTAGCAGGAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPSQSSSCGLVQAPALCEKILEA*TSRNRS
Trigger: GGACCTATTCCTGCTAGTGCAGGCCTCCAGAATCTT...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602351.5
CDS-3UTR CCA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCTCTCCAGTTTGTCGTTaGCGTCGTGCAGAGACGTGG +
Preference number: 4 (lower is better)
Translates to: GKRILPCKPRSQRRRGSASPVCR*RRAETW
Trigger: CCACGTCTCTGCACGACGCCAACGACAAACTGGAGA...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp AAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTGCTGCAGCTTCTGCTTaGCGTCGTCCAACCACTCGG +
Preference number: 4 (lower is better)
Translates to: KRILPCKPRSQRRRGSAIAAASA*RRPTTR
Trigger: CCGAGTGGTTGGACGACGCCAAGCAGAAGCTGCAGC...AATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATGCTGCAGCTTCTGCTTaGCGTCGTCCAACCACTCGG +
Preference number: 4 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDAAASA*RRPTTR
Trigger: CCGAGTGGTTGGACGACGCCAAGCAGAAGCTGCAGC...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGGCTGTAAGCGCTCGTTaGACTCGCTCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGAVSAR*TRSAAC
Trigger: ACAAGCTGCTGAGCGAGTCCAACGAGCGCTTACAGC...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGGAACAGTTCCCCAGGGAATaGGGGTGGTATGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: VAVRDSISSCVIHTFPVEQFPRE*GWYGAR
Trigger: GCGGGCTCCATACCACCCCCATTCCCTGGGGAACTG...TTCCACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GGGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTCCTGTGCATTCTGCGTaGGGATCTGCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GRDFFLPASSPSQSSSCGPVHSA*GSAGAR
Trigger: CCTTGCTCCTGCAGATCCCCACGCAGAATGCACAGG...ACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp CTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGCCTGTGCATTCTGCGTaGGGATCTGCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSDEEGRLGPRDWAGKRPVHSA*GSAGAR
Trigger: CCTTGCTCCTGCAGATCCCCACGCAGAATGCACAGG...CCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCCAGCCGAACGAAAGTTaGGGGGCAACATCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GKRILPCKPRSQRRRGSAQPNES*GATSQL
Trigger: CAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCTG...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp AGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCGCCCAGCGGCATCGTaGAAAGAGGATTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: RILPCKPRSQRRRGSAILRPAAS*KEDSPM
Trigger: CATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCG...CAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTCCCCCATGCGCTCCTTaGGGTGAAGCTGTAAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFPPCAP*GEAVSA
Trigger: AGCGCTTACAGCTTCACCTCAAGGAGCGCATGGGGG...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGTCCTTCTTGTTAAGGTaGTCTAACATTCGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARSFLLR*SNIRAS
Trigger: GGACGCTCGAATGTTAGATCACCTTAACAAGAAGGA...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTTCTCGGATCTGGGTCTaGCTTTCTTCCCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFSRIWV*LSSRLR
Trigger: GCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGA...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCTTTACCCGTGATCACTaGGTGACGCCTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVFTRDH*VTPGAG
Trigger: CCCCGCCCCAGGCGTCACTCAGTGATCACGGGTAAA...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCAGTTCTCTTTACCCGTaGTCACTGAGTGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCSSLYP*SLSDAW
Trigger: CCAGGCGTCACTCAGTGATCACGGGTAAAGAGAACT...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATTCCTTGAGGTCGCGCTaGAGCTTGGAGTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDSLRSR*SLELAS
Trigger: GGAAGCCAACTCCAAGCTGCAGCGCGACCTCAAGGA...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATGCTTTCTGCAGCGTCTaGTGCAGCTTCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDAFCSV*CSFCLA
Trigger: CGCCAAGCAGAAGCTGCAGCAGACGCTGCAGAAAGC...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTTTCATCTTCTCCCGCTaGCGGGCCCGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GFLPPRFFPLSVQFMWFGFIFSR*RARCSS
Trigger: AGAGCTGCAGCGGGCCCGGCAGCGGGAGAAGATGAA...ACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGTGGTCGATCTCCATCTaGATCCGCTCCATTTCGGCC +
Preference number: 4 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLWSISI*IRSISA
Trigger: GGCCGAAATGGAGCGGATGCAGATGGAGATCGACCA...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTATGATGGCCAGCGTCTaGACGTCAGCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFMMASV*TSACPL
Trigger: CAGTGGGCAGGCTGACGTGCAGACGCTGGCCATCAT...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp GGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGCGTTCATGTCGCCATATaGCAGGATCTGCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GFSHANPGARGEGEAPFCVHVAI*QDLLPA
Trigger: AGCTGGGAGCAGATCCTGGCATATGGCGACATGAAC...GCAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS-3UTR GCA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATGGTCACCTGGAGGCCTaGACTAGCAGGAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDGHLEA*TSRNRS
Trigger: GGACCTATTCCTGCTAGTGCAGGCCTCCAGGTGACC...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCAGAGCTGCAAACTCCTaGGGCAGCGCGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSRAANS*GSAMLS
Trigger: GCTCAGCATCGCGCTGCCCCAGGAGTTTGCAGCTCT...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCGAAGCTTCTTCATGTTaGCTATCTCCTCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASEASSC*LSPRSG
Trigger: CCCTGAGCGAGGAGATAGCCAACATGAAGAAGCTTC...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGCACCAGAAGGTAAAGTaGGTGCCTGAGAGTAACGGA +
Preference number: 4 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPHQKVK*VPESNG
Trigger: TCCGTTACTCTCAGGCACCCACTTTACCTTCTGGTG...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGCCCCAGAGGGTCAGTaGCCAGTGTCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFAPEGQ*PVSHLR
Trigger: CCTCAGATGAGACACTGGCCACTGACCCTCTGGGGC...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CCTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGTTCCCCACCCACTCGTaGTTCATGTCGCCATATGCC +
Preference number: 4 (lower is better)
Translates to: PPFGRRRKTWAPRLGRKKFPTHS*FMSPYA
Trigger: GGCATATGGCGACATGAACCACGAGTGGGTGGGGAA...CTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
CDS-3UTR CCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATCCTGTGCATTCTGCGTaGGGATCTGCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNPVHSA*GSAGAR
Trigger: CCTTGCTCCTGCAGATCCCCACGCAGAATGCACAGG...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CCTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGCAGCCGAACGAAAGTTaGGGGGCAACATCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PPFGRRRKTWAPRLGRKKQPNES*GATSQL
Trigger: CAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCTG...CTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTAGAAGTCTGGCCTTCTaGCTGCAGCTTGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVRSLAF*LQLAER
Trigger: CCTCTCCGCAAGCTGCAGCCAGAAGGCCAGACTTCT...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR TCA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCCCCCATGCGCTCCTTaGGGTGAAGCTGTAAGCGCT +
Preference number: 4 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVPPCAP*GEAVSA
Trigger: AGCGCTTACAGCTTCACCTCAAGGAGCGCATGGGGG...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTCTGGATCTCCGTGTCTaGCAGGTTGGCCATGATGGC +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFLDLRV*QVGHDG
Trigger: GCCATCATGGCCAACCTGTCAGACACGGAGATCCAG...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp CGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGTCCTTCTTGTTAAGGTaGTCTAACATTCGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: RHVAQRHRGKRILPCKPRSFLLR*SNIRAS
Trigger: GGACGCTCGAATGTTAGATCACCTTAACAAGAAGGA...CCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GTTGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGTGCATTCTGCGTGGGGATAAGGTCTCCGCTTTCTaGAGCGTCTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VAEFLLQKLPGLCILRGDKVSAF*SVCCSF
Trigger: GAAGCTGCAGCAGACGCTGCAGAAAGCGGAGACCTT...ATCCCCACGCAGAATGCACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGTCCTCCAGGAGTTCATaGTTCCTCTTGTTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGSSRSS*FLLFLR
Trigger: CCGAAGGAACAAGAGGAAGCATGAACTCCTGGAGGA...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGATCCTCCAGGAGTTCATaGTTCCTCTTGTTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERSSRSS*FLLFLR
Trigger: CCGAAGGAACAAGAGGAAGCATGAACTCCTGGAGGA...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCGCTGCAGCTTGGAGTTaGCTTCCTCTGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSAAAWS*LPLPCP
Trigger: TGGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGC...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp AAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTTTTGTGCAGAGAATCTaGGGTGCCCTCACTTCCCCG +
Preference number: 4 (lower is better)
Translates to: KRILPCKPRSQRRRGSAIFVQRI*GALTSP
Trigger: CGGGGAAGTGAGGGCACCCCAGATTCTCTGCACAAA...AATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTTCCCCACCCACTCGTaGTTCATGTCGCCATATGCC +
Preference number: 4 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVFPTHS*FMSPYA
Trigger: GGCATATGGCGACATGAACCACGAGTGGGTGGGGAA...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
CDS-3UTR CCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCAGAAGTCTGGCCTTCTaGCTGCAGCTTGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSRSLAF*LQLAER
Trigger: CCTCTCCGCAAGCTGCAGCCAGAAGGCCAGACTTCT...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp GGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCGAGTGAGGTCACCTaGAGGCCTGCACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GFLPPRFFPLSVQFMWFGPSEVT*RPALAG
Trigger: TCCTGCTAGTGCAGGCCTCCAGGTGACCTCACTCGG...ACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602848.5
CDS-3UTR CCA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCGCTGGTCTGTACAGATaGTCCAGTCCTCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVAGLYR*SSPRRE
Trigger: CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGC...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
3UTR CAA 72 bp TCCAGGAGTTCATGCTTCCTCTTGTTCCTTCGGTCCTaGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRSSCFLLFLRS*SPGPVSLASPR
Trigger: TCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGAACAAGAGGAAGCATGAACTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
3UTR CAA 72 bp TCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTaGCTGAATTCCTTCTCCAGAAGCTGCCGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSSRLSVPKEIR*LNSFSRSCRAC
Trigger: ACAGGCCCGGCAGCTTCTGGAGAAGGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACAGAGACTTTAGAGCTTTaGGCACTTCTACCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTETLEL*ALLPPR
Trigger: CCTCGGAGGTAGAAGTGCTCAAAGCTCTAAAGTCTC...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATAGGTTCAGAGTCTCCTaGTTGCTCAGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNRFRVS*LLSSSS
Trigger: GGAGCTGGAACTGAGCAATCAGGAGACTCTGAACCT...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp CCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAGACGGCCTATGGATaGCTTGATGCTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSGIVERGFSHANPGARGETAYG*LDALLL
Trigger: AAGAAGAAGAGCATCAAGTCATCCATAGGCCGTCTC...TCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTATTCTTCCGTCCGAGTaGGGTCACCTGCATGACGCC +
Preference number: 4 (lower is better)
Translates to: GFLPPRFFPLSVQFMWFGILPSE*GHLHDA
Trigger: GGCGTCATGCAGGTGACCTCACTCGGACGGAAGAAT...ACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS-3UTR GCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCTCCCTCTCCAGCAGCTaGTCCCGACATAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSSLSSS*SRHKFS
Trigger: GCTGAACTTATGTCGGGAGCAGCTGCTGGAGAGGGA...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGTCAGAGTCTCCTGATTaGTCAGTTCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLSESPD*SVPAPP
Trigger: AGGAGGAGCTGGAACTGAGCAATCAGGAGACTCTGA...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTTGGTCGATCTCCATCTaGATCCGCTCCATTTCGGCC +
Preference number: 4 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFWSISI*IRSISA
Trigger: GGCCGAAATGGAGCGGATGCAGATGGAGATCGACCA...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCGCTGTAAGCGCTCGTTaGACTCGCTCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSAVSAR*TRSAAC
Trigger: ACAAGCTGCTGAGCGAGTCCAACGAGCGCTTACAGC...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCTTTGTGCAGAGAATCTaGGGTGCCCTCACTTCCCCG +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSFVQRI*GALTSP
Trigger: CGGGGAAGTGAGGGCACCCCAGATTCTCTGCACAAA...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CCA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCCAGCCGAACGAAAGTTaGGGGGCAACATCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSQPNES*GATSQL
Trigger: CAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCTG...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCTCAAAATTCCCATaGCGTTCCTCGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNSSKFP*RSSALL
Trigger: CAACAAGGCCGAGGAACGTCATGGGAATTTTGAGGA...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp AGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGGAGACGGCCTATGGATaGCTTGATGCTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RILPCKPRSQRRRGSAILETAYG*LDALLL
Trigger: AAGAAGAAGAGCATCAAGTCATCCATAGGCCGTCTC...CAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCCCTCCAGCTCTGCTGTaGGCCGGTTGGAATCCCCGC +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSPPALL*AGWNPR
Trigger: GCGGGGATTCCAACCGGCGCACAGCAGAGCTGGAGG...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCCTTCTGGCTGCAGCTTaGGGAGAGGGAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSLLAAA*GEGAPE
Trigger: CTCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAG...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CCA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTCACCAGAAGGTAAAGTaGGTGCCTGAGAGTAACGGA +
Preference number: 4 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVHQKVK*VPESNG
Trigger: TCCGTTACTCTCAGGCACCCACTTTACCTTCTGGTG...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTAGCAGCAACTCATCCTaGAGCTTCTTCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVSSNSS*SFFMLA
Trigger: AGCCAACATGAAGAAGCTTCAGGATGAGTTGCTGCT...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATAGCAGCAACTCATCCTaGAGCTTCTTCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ALSSSSRLSVPKEIRLLNSSNSS*SFFMLA
Trigger: AGCCAACATGAAGAAGCTTCAGGATGAGTTGCTGCT...ATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCAGTTCTCTTTACCCGTaGTCACTGAGTGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVSSLYP*SLSDAW
Trigger: CCAGGCGTCACTCAGTGATCACGGGTAAAGAGAACT...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp GTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGGAAGTCCCTTCTCTTTCTTaGCAAAGAGACGGCCTATGG +
Preference number: 4 (lower is better)
Translates to: VAVRDSISSCVIHTFPVEVPSLS*QRDGLW
Trigger: CCATAGGCCGTCTCTTTGGCAAGAAAGAGAAGGGAC...TTCCACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR GCA 90 bp GGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTGTTCATGTCGCCATATaGCAGGATGGGCTTGGTCGT +
Preference number: 4 (lower is better)
Translates to: GFLPPRFFPLSVQFMWFGVHVAI*QDGLGR
Trigger: ACGACCAAGCCCATCCTGGCATATGGCGACATGAAC...ACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602351.5
ENST00000602848.5
CDS-3UTR TCA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCGAGACTTTAGAGCTTTaGGCACTTCTACCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVETLEL*ALLPPR
Trigger: CCTCGGAGGTAGAAGTGCTCAAAGCTCTAAAGTCTC...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTTCCTCAAAATTCCCATaGCGTTCCTCGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GFLPPRFFPLSVQFMWFGSSKFP*RSSALL
Trigger: CAACAAGGCCGAGGAACGTCATGGGAATTTTGAGGA...ACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp GTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGGAAGAGACGGCCTATGGATaGCTTGATGCTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VAVRDSISSCVIHTFPVEETAYG*LDALLL
Trigger: AAGAAGAAGAGCATCAAGTCATCCATAGGCCGTCTC...TTCCACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp GTCGTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGTCCTTCTTGTTAAGGTaGTCTAACATTCGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: VVAVRDSISSCVIHTFPVSFLLR*SNIRAS
Trigger: GGACGCTCGAATGTTAGATCACCTTAACAAGAAGGA...CACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR TCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCTCTCGGATCTGGGTCTaGCTTTCTTCCCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSSRIWV*LSSRLR
Trigger: GCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGA...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR GCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCGCTTCACCACGGTCATaGGCAGTGACCTCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSASPRS*AVTSRA
Trigger: GGCACGAGAGGTCACTGCGCATGACCGTGGTGAAGC...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR GCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCTGCCTGCCCGACCACTaGCAGCCACATAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSCLPDH*QPHRDP
Trigger: TGGATCCCTATGTGGCTGGCAGTGGTCGGGCAGGCA...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCGGTCGCGCTGCAGCTTaGAGTTGGCTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSGRAAA*SWLPLP
Trigger: AGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACC...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCCTGGATCTCCGTGTCTaGCAGGTTGGCCATGATGGC +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSLDLRV*QVGHDG
Trigger: GCCATCATGGCCAACCTGTCAGACACGGAGATCCAG...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCAGGTTCAGAGTCTCCTaGTTGCTCAGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSRFRVS*LLSSSS
Trigger: GGAGCTGGAACTGAGCAATCAGGAGACTCTGAACCT...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR TCA 90 bp AATTACAAAGTAGAGAAAAGGAAAGCGGACGTTTGGGGCGGGATTTCTTCCTCCTCCTCAAAATTCCCATaGCGTTCCTCGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: NYKVEKRKADVWGGISSSSSKFP*RSSALL
Trigger: CAACAAGGCCGAGGAACGTCATGGGAATTTTGAGGA...GGAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTTTTCTCTACTTTGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCGACCAGCGGCCCCTCTaGCCTGCCCGACCACTGCCA +
Preference number: 5 (lower is better)
Translates to: QMVQSSARAPPPALPGEADQRPL*PARPLP
Trigger: TGGCAGTGGTCGGGCAGGCAAGAGGGGCCGCTGGTC...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS GCA 90 bp CCCTGTCCCGCCCAGACCTGGGGCAGCGCGATGCTGAGCTGGCGCTaGAGCGAGTCCTTCTCGTGGCCGAGCTCGCGCAGCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PCPAQTWGSAMLSWR*SESFSWPSSRSRSC
Trigger: GCAGCTGCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGTCTGGGCGGGACAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602492.5
CDS GCA 90 bp GCCGAGCTCGCGCAGCCGCAGCTGCGCTGTAGCCAACCCGTCCTGTaGCTCGCGCAGCGTCTCCAGCAGGCGCTCGCGCTCCGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: AELAQPQLRCSQPVL*LAQRLQQALALREH
Trigger: ATGCTCACGGAGCGCGAGCGCCTGCTGGAGACGCTGCGCGAGGCACAGGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGCGAGCTCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602509.5
ENST00000602655.5
CDS-3UTR CAA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCGACTCGCTCAGCAGCTaGTCCACCGTCTCGGACAGC +
Preference number: 5 (lower is better)
Translates to: QMVQSSARAPPPALPGEADSLSS*STVSDS
Trigger: GCTGTCCGAGACGGTGGACAAGCTGCTGAGCGAGTC...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS GCA 90 bp CGCTGCAGCGAGTCCTTCTCGTGGCCGAGCTCGCGCAGCCGCAGCTaGGCTGTAGCCAACCCGTCCTGTGCCTCGCGCAGCGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RCSESFSWPSSRSRS*AVANPSCASRSVSS
Trigger: GCTGGAGACGCTGCGCGAGGCACAGGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCTGCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602509.5
ENST00000602655.5
CDS CCA 90 bp TGGGGCAGCGCGATGCTGAGCTGGCGCTGCAGCGAGTCCTTCTCGTaGCCGAGCTCGCGCAGCCGCAGCTGCGCTGTAGCCAACCCGTCC +
Preference number: 5 (lower is better)
Translates to: WGSAMLSWRCSESFS*PSSRSRSCAVANPS
Trigger: GGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602492.5
ENST00000602509.5
ENST00000602655.5
CDS-3UTR CAA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCTGCTGTGCGCCGGTaGGAATCCCCGCCAGGACCC +
Preference number: 5 (lower is better)
Translates to: RARALPLVCTDGPVLGASSAVRR*ESPPGP
Trigger: GGGTCCTGGCGGGGATTCCAACCGGCGCACAGCAGA...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCCTTCTGGCTGCAGCTaGCGGAGAGGGAGCCCCGGA +
Preference number: 5 (lower is better)
Translates to: AGARTPAGLYRWSSPRREPSGCS*RRGSPG
Trigger: TCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAGG...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGACCTTCTGGCTGCAGCTaGCGGAGAGGGAGCCCCGGA +
Preference number: 5 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARPSGCS*RRGSPG
Trigger: TCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAGG...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp CCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCCCTTCTGGCTGCAGCTaGCGGAGAGGGAGCCCCGGA +
Preference number: 5 (lower is better)
Translates to: PAGLYRWSSPRRELPRPLPSGCS*RRGSPG
Trigger: TCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAGG...GAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS GCA 90 bp CCCCGCACCCCCAAGGTCGCCCAGCACGGTCCTCACCTGGAGGCCTaGACTAGCAGGAATAGGTCCGGACCGAAACGCCGTCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PRTPKVAQHGPHLEA*TSRNRSGPKRRLPG
Trigger: CCCGGGCAGACGGCGTTTCGGTCCGGACCTATTCCTGCTAGTGCAGGCCTCCAGGTGAGGACCGTGCTGGGCGACCTTGGGGGTGCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS CCA 90 bp CCGTGCCGCCCCGCACCCCCAAGGTCGCCCAGCACGGTCCTCACCTaGAGGCCTGCACTAGCAGGAATAGGTCCGGACCGAAACGCCGTC +
Preference number: 5 (lower is better)
Translates to: PCRPAPPRSPSTVLT*RPALAGIGPDRNAV
Trigger: GACGGCGTTTCGGTCCGGACCTATTCCTGCTAGTGCAGGCCTCCAGGTGAGGACCGTGCTGGGCGACCTTGGGGGTGCGGGGCGGCACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS-3UTR CAA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCTCTGCTGTGCGCCGGTaGGAATCCCCGCCAGGACCC +
Preference number: 5 (lower is better)
Translates to: ARALPLVCTDGPVLGASSSAVRR*ESPPGP
Trigger: GGGTCCTGGCGGGGATTCCAACCGGCGCACAGCAGA...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCGCTGCAGCTTGGAGTaGGCTTCCTCTGCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: YRWSSPRRELPRPLSPARRCSLE*ASSALP
Trigger: GGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCG...CCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCCTGGGCCTGTCAGCTaGGCTAGCCCCAGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: AGARTPAGLYRWSSPRREPGPVS*ASPRGS
Trigger: TGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGG...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTATGGCGAGGCGTAGCTaGAGTCGGTGCAGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: PRPCARRARALPLVCTDGMARRS*SRCSGL
Trigger: CAACCCGCTGCACCGACTCAAGCTACGCCTCGCCAT...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CAGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATCCCAGCTGATCTCCTaGGTCTCGGGCTTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: QAPALCEAGARTPAGLYRSQLIS*VSGLVV
Trigger: CACGACCAAGCCCGAGACCAAGGAGATCAGCTGGGA...TCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS-3UTR CAA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCCCCATGACCCGCTCATaGGACCACACCATCACGTCT +
Preference number: 5 (lower is better)
Translates to: QMVQSSARAPPPALPGEAPMTRS*DHTITS
Trigger: AGACGTGATGGTGTGGTCCAATGAGCGGGTCATGGG...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGAGCGGCTGAAAGACTaGGCGCTGTCCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VQMVQSSARAPPPALPGEERLKD*ALSSSS
Trigger: GCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTC...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGTCCAGTTCATGTGGTTaGGTCCAGGCCCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VQMVQSSARAPPPALPGESSSCG*VQAPAL
Trigger: CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGA...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGACGAAGAAGGAAGACTaGGGCCCCGCGACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VQMVQSSARAPPPALPGETKKED*GPATGQ
Trigger: CTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGT...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp CCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCACGAAGAAGGAAGACTaGGGCCCCGCGACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PALCEAGARTPAGLYRWSTKKED*GPATGQ
Trigger: CTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGT...GGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS GCA 90 bp GTCAGAGCTGCAAACTCCTGGGGCAGCGCGATGCTGAGCTGGCGCTaGAGCGAGTCCTTCTCGTGGCCGAGCTCGCGCAGCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VRAANSWGSAMLSWR*SESFSWPSSRSRSC
Trigger: GCAGCTGCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGAGTTTGCAGCTCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602509.5
ENST00000602655.5
CDS CCA 90 bp CCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTaGAGGGAGAGCGAGCAGCGGTTCAGCCTGGAGCACCCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PDRNAVCPGTPRSLA*RESEQRFSLEHPPP
Trigger: GGGAGGAGGGTGCTCCAGGCTGAACCGCTGCTCGCTCTCCCTCCAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602783.1
CDS-3UTR CAA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAAGGAGCAGCCGCGTGTaGTTCCGTTCCGCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RPCARRARALPLVCTDGPRSSRV*FRSAFS
Trigger: GCTGAAGGCGGAACGGAACAACACGCGGCTGCTCCT...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGAGGTCGCGCTGCAGCTaGGAGTTGGCTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: AGARTPAGLYRWSSPRRERSRCS*ELASSA
Trigger: GGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACCT...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGCGTTCCTCGGCCTTGTaGAGCGCCGCCACGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARRSSAL*SAATRC
Trigger: GCAGCGCGTGGCGGCGCTCAACAAGGCCGAGGAACG...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CAGGCCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGAAGCTGTAAGCGCTCGTaGGACTCGCTCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QAPALCEAGARTPAGLYRSCKRS*DSLSSL
Trigger: CAAGCTGCTGAGCGAGTCCAACGAGCGCTTACAGCT...TCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTTCCGTGTCTGACAGGTaGGCCATGATGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: PRPCARRARALPLVCTDGSVSDR*AMMAPL
Trigger: GAGCGGTGCCATCATGGCCAACCTGTCAGACACGGA...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCAGGAGCAGCCGCGTGTaGTTCCGTTCCGCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPRSSRV*FRSAFS
Trigger: GCTGAAGGCGGAACGGAACAACACGCGGCTGCTCCT...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCGCTGCAGCTTGGAGTaGGCTTCCTCTGCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: ARALPLVCTDGPVLGASSRCSLE*ASSALP
Trigger: GGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCG...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGGGCCCGCTGCAGCTCTaGATTCTTCTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LYRWSSPRRELPRPLSPAGPLQL*ILLFQL
Trigger: CAGCTGGAAGAGAAGAATCAAGAGCTGCAGCGGGCC...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCGACTCGCTCAGCAGCTaGTCCACCGTCTCGGACAGC +
Preference number: 5 (lower is better)
Translates to: RAHSRWSVQMVQSSARAPDSLSS*STVSDS
Trigger: GCTGTCCGAGACGGTGGACAAGCTGCTGAGCGAGTC...GGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCCATGACCCGCTCATaGGACCACACCATCACGTCT +
Preference number: 5 (lower is better)
Translates to: YRWSSPRRELPRPLSPARPMTRS*DHTITS
Trigger: AGACGTGATGGTGTGGTCCAATGAGCGGGTCATGGG...CCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp TGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGTCCAGTTCATGTGGTTaGGTCCAGGCCCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: CEAGARTPAGLYRWSSPRSSSCG*VQAPAL
Trigger: CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGA...CCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTATGCCAGGATGGGCTaGGTCGTGGCCGTAAGGGAC +
Preference number: 5 (lower is better)
Translates to: RARALPLVCTDGPVLGASYARMG*VVAVRD
Trigger: GTCCCTTACGGCCACGACCAAGCCCATCCTGGCATA...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602351.5
ENST00000602848.5
CDS GCA 90 bp CAGCGCCTCCTTGAGGTCGCGCTGCAGCTTGGAGTTGGCTTCCTCTaGCTTGCCCAGCTCACGGTGCGCGGTGCCCAACTCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QRLLEVALQLGVGFL*LAQLTVRGAQLLLQ
Trigger: CTGGAGGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACCTCAAGGAGGCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS-3UTR CAA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTTGCTGCAGCTTCTGCTaGGCGTCGTCCAACCACTCG +
Preference number: 5 (lower is better)
Translates to: SRWSVQMVQSSARAPPPACCSFC*ASSNHS
Trigger: CGAGTGGTTGGACGACGCCAAGCAGAAGCTGCAGCA...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp ACCACGGTGGGCCCGTCCCAGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCAGCTGTAAGCGCTCGTaGGACTCGCTCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TTVGPSQAAKGRPWRQASSCKRS*DSLSSL
Trigger: CAAGCTGCTGAGCGAGTCCAACGAGCGCTTACAGCT...GGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCTGGGACGGGCCCACCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCCTGGGCCTGTCAGCTaGGCTAGCCCCAGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWPGPVS*ASPRGS
Trigger: TGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGG...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAAGGAAAGCGGACGTTaGGGGCGGGATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LYRWSSPRRELPRPLSPAKESGR*GRDFFL
Trigger: GAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTT...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp TACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGAAGGAAAGCGGACGTTaGGGGCGGGATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: YRWSSPRRELPRPLSPARKESGR*GRDFFL
Trigger: GAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTT...CCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS GCA 90 bp GCTTGGAGTTGGCTTCCTCTGCCTTGCCCAGCTCACGGTGCGCGGTaGCCAACTCCTCCTCCAGCTGGCTCATCTGACGGCACAGCACCG +
Preference number: 5 (lower is better)
Translates to: AWSWLPLPCPAHGAR*PTPPPAGSSDGTAP
Trigger: CGGTGCTGTGCCGTCAGATGAGCCAGCTGGAGGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCAACTCCAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
ENST00000602726.1
CDS-3UTR CAA 90 bp CAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGCCAGAGACTTTAGAGCTTaGAGCACTTCTACCTCCGAG +
Preference number: 5 (lower is better)
Translates to: QMVQSSARAPPPALPGEARDFRA*STSTSE
Trigger: CTCGGAGGTAGAAGTGCTCAAAGCTCTAAAGTCTCT...GGCCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGTCTGCTGTGCGCCGGTaGGAATCCCCGCCAGGACCC +
Preference number: 5 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQSAVRR*ESPPGP
Trigger: GGGTCCTGGCGGGGATTCCAACCGGCGCACAGCAGA...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGATTCTCCAGTTTGTCGTaGGCGTCGTGCAGAGACGTG +
Preference number: 5 (lower is better)
Translates to: GGRAHSRWSVQMVQSSARFSSLS*ASCRDV
Trigger: CACGTCTCTGCACGACGCCAACGACAAACTGGAGAA...TCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGAACTCGTTCTCCAGTTaGTCGTTGGCGTCGTGCAGA +
Preference number: 5 (lower is better)
Translates to: VQMVQSSARAPPPALPGENSFSS*SLASCR
Trigger: TCTGCACGACGCCAACGACAAACTGGAGAACGAGTT...CTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGCGTTCCTCGGCCTTGTaGAGCGCCGCCACGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGRSSAL*SAATRC
Trigger: GCAGCGCGTGGCGGCGCTCAACAAGGCCGAGGAACG...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACGTTCCTCGGCCTTGTaGAGCGCCGCCACGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERRSSAL*SAATRC
Trigger: GCAGCGCGTGGCGGCGCTCAACAAGGCCGAGGAACG...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTGCCAAGAGCTGCTCCTaGTTTAGCAGCAACTCATCC +
Preference number: 5 (lower is better)
Translates to: PRPCARRARALPLVCTDGAKSCS*FSSNSS
Trigger: GGATGAGTTGCTGCTAAACAAGGAGCAGCTCTTGGC...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGAGACCAGCGGCCCCTCTaGCCTGCCCGACCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERDQRPL*PARPLP
Trigger: TGGCAGTGGTCGGGCAGGCAAGAGGGGCCGCTGGTC...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp TACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGAGGATCAGCTTGATCTCCTaGTTGATGGCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: YRWSSPRRELPRPLSPARISLIS*LMASSC
Trigger: GCAGCTGGAGGCCATCAACAAGGAGATCAAGCTGAT...CCTCGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGGATGGCGAGGCGTAGCTaGAGTCGGTGCAGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: PPLSPVHVVWSRPRPCARMARRS*SRCSGL
Trigger: CAACCCGCTGCACCGACTCAAGCTACGCCTCGCCAT...CCTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCCCATGACCCGCTCATaGGACCACACCATCACGTCT +
Preference number: 5 (lower is better)
Translates to: CEAGARTPAGLYRWSSPRPMTRS*DHTITS
Trigger: AGACGTGATGGTGTGGTCCAATGAGCGGGTCATGGG...CCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS TCA 90 bp GTGGGAGAGGGCTTCGCGTGGGGGAGAGGAAGGAGGGTGTCCTCCTaGAGGCCCTGGGCCACACGTTTATGTCCCTCCTGCTTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: VGEGFAWGRGRRVSS*RPWATRLCPSCFLG
Trigger: CCCCAGAAAGCAGGAGGGACATAAACGTGTGGCCCAGGGCCTTCAGGAGGACACCCTCCTTCCTCTCCCCCACGCGAAGCCCTCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602800.1
CDS GCA 90 bp TGGAGGCCTGCACTAGCAGGAATAGGTCCGGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGTCTGGCCTGGAGGGAGAGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: WRPALAGIGPDRNAV*PGTPRSLAWRESEQ
Trigger: CTGCTCGCTCTCCCTCCAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACCTATTCCTGCTAGTGCAGGCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602783.1
CDS-3UTR CAA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGAGGTCGCGCTGCAGCTaGGAGTTGGCTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SPSQSSSCGLVQAPALCERSRCS*ELASSA
Trigger: GGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACCT...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGTGCTGCAGCTTCTGCTaGGCGTCGTCCAACCACTCG +
Preference number: 5 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWCCSFC*ASSNHS
Trigger: CGAGTGGTTGGACGACGCCAAGCAGAAGCTGCAGCA...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCCCTTCTGGCTGCAGCTaGCGGAGAGGGAGCCCCGGA +
Preference number: 5 (lower is better)
Translates to: GKRILPCKPRSQRRRGSAPSGCS*RRGSPG
Trigger: TCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAGG...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCAAGGAAAGCGGACGTTaGGGGCGGGATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ARALPLVCTDGPVLGASSKESGR*GRDFFL
Trigger: GAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTT...GGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS CCA 90 bp CTCCCAGAAGTCTGGCCTGGAGGGAGAGCGAGCAGCGGTTCAGCCTaGAGCACCCTCCTCCCTGTTCCTCTCCAGGATTCCTCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: LPEVWPGGRASSGSA*STLLPVPLQDSSLW
Trigger: CCAAAGGGAGGAATCCTGGAGAGGAACAGGGAGGAGGGTGCTCCAGGCTGAACCGCTGCTCGCTCTCCCTCCAGGCCAGACTTCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602783.1
CDS CCA 90 bp GCACATCATGGCGGCGGTGCGGGCATCAGGTCCGACGGGTCCAGCTaGCCCGGCGGAAAGCAGGAGGGACTTTCACTCAGTTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: AHHGGGAGIRSDGSS*PGGKQEGLSLSSFF
Trigger: AAAGAAGGAACTGAGTGAAAGTCCCTCCTGCTTTCCGCCGGGCCAGCTGGACCCGTCGGACCTGATGCCCGCACCGCCGCCATGATGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602509.5
CDS-3UTR CAA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGCGCTGCAGCTTGGAGTaGGCTTCCTCTGCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQRCSLE*ASSALP
Trigger: GGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCG...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCAGGTCGCGCTGCAGCTaGGAGTTGGCTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASRSRCS*ELASSA
Trigger: GGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACCT...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCGATACAACGACTCCTaGCTAGCTAACTCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AGARTPAGLYRWSSPRRERYNDS*LANSFS
Trigger: GGAGAACGAGTTAGCTAGCAAGGAGTCGTTGTATCG...CTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTGACCAGCGGCCCCTCTaGCCTGCCCGACCACTGCCA +
Preference number: 5 (lower is better)
Translates to: GGISSSPLLPPLSPVHVVDQRPL*PARPLP
Trigger: TGGCAGTGGTCGGGCAGGCAAGAGGGGCCGCTGGTC...AACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCATCAGCTTGATCTCCTaGTTGATGGCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LVCTDGPVLGASSPARSPISLIS*LMASSC
Trigger: GCAGCTGGAGGCCATCAACAAGGAGATCAAGCTGAT...GGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCATCCTCTTGGATCAGCTaGATCTCCTTGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: RPCARRARALPLVCTDGPSSWIS*ISLLMA
Trigger: GGCCATCAACAAGGAGATCAAGCTGATCCAAGAGGA...TGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CCCCGGCCCTGTGCGAGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTTGTCTCCTTCTCCTCTaGGATCAGCTTGATCTCCTT +
Preference number: 5 (lower is better)
Translates to: PRPCARRARALPLVCTDGCLLLL*DQLDLL
Trigger: AAGGAGATCAAGCTGATCCAAGAGGAGAAGGAGACA...ACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCTCGCACAGGGCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GGTCCGGACCGAAACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTTCTGGCCCATGACCCGCTCATaGGACCACACCATCACGTCT +
Preference number: 5 (lower is better)
Translates to: GPDRNAVCPGTPRSLAFWPMTRS*DHTITS
Trigger: AGACGTGATGGTGTGGTCCAATGAGCGGGTCATGGG...CCAGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp AGGCAGCAAAAGGTAGGCCCTGGCGGCAGGCCTCCTCCAGGAGTTCATGCTTCCGAGCGGCTGAAAGACTaGGCGCTGTCCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RQQKVGPGGRPPPGVHASERLKD*ALSSSS
Trigger: GCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTC...GGAAGCATGAACTCCTGGAGGAGGCCTGCCGCCAGGGCCTACCTTTTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCGGCTGAAAGACTaGGCGCTGTCCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPERLKD*ALSSSS
Trigger: GCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTC...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACACCTTCTGGCTGCAGCTaGCGGAGAGGGAGCCCCGGA +
Preference number: 5 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTPSGCS*RRGSPG
Trigger: TCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAGG...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS TCA 90 bp GGCAAGAGTCTGCCCATCCCCATCCTTGCCCGGCTCTTCCAGCCCTaGCCGCCGCCTAGACAGCTGTTCTCGAAGGTTCAGAGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GKSLPIPILARLFQP*PPPRQLFSKVQSLL
Trigger: CAGGAGACTCTGAACCTTCGAGAACAGCTGTCTAGGCGGCGGTCAGGGCTGGAAGAGCCGGGCAAGGATGGGGATGGGCAGACTCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
ENST00000602726.1
CDS-3UTR CAA 90 bp CGGGAGGGAAGCCCCGCCCCCTTCCCGCGGGTAAAGGACACCCGTCTCCCAACACGATACAACGACTCCTaGCTAGCTAACTCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: REGSPAPFPRVKDTRLPTRYNDS*LANSFS
Trigger: GGAGAACGAGTTAGCTAGCAAGGAGTCGTTGTATCG...TGTTGGGAGACGGGTGTCCTTTACCCGCGGGAAGGGGGCGGGGCTTCCCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTGCGAGAGCTGTAAGCGCTCGTaGGACTCGCTCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SPSQSSSCGLVQAPALCESCKRS*DSLSSL
Trigger: CAAGCTGCTGAGCGAGTCCAACGAGCGCTTACAGCT...CTCGCACAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTTCCTCTTGGATCAGCTaGATCTCCTTGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: SRWSVQMVQSSARAPPPASSWIS*ISLLMA
Trigger: GGCCATCAACAAGGAGATCAAGCTGATCCAAGAGGA...AGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp AGGCGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGTTCATGCTTCCTCTaGTTCCTTCGGTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RRARALPLVCTDGPVLGASSCFL*FLRSLS
Trigger: AGACAAGGACCGAAGGAACAAGAGGAAGCATGAACT...CGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CACGTCTCGGATCTGGGTCTGACTTTCTTCCCGCCTCCGCTCCAGGTCCTTCCGTCCCAGCTGATCTCCTaGGTCTCGGGCTTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: HVSDLGLTFFPPPLQVLPSQLIS*VSGLVV
Trigger: CACGACCAAGCCCGAGACCAAGGAGATCAGCTGGGA...CGGAAGGACCTGGAGCGGAGGCGGGAAGAAAGTCAGACCCAGATCCGAGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp CTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCGCCCGCTCTCCCCGGCGCCTAAGGAGATAAGGTaGCTGAATTCCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LYRWSSPRRELPRPLSPAPKEIR*LNSFSR
Trigger: TCTGGAGAAGGAATTCAGCAACCTTATCTCCTTAGG...CGCCGGGGAGAGCGGGCGGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp CCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAGCGGCTGAAAGACTaGGCGCTGTCCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PSGIVERGFSHANPGARGERLKD*ALSSSS
Trigger: GCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTC...TCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS CCA 90 bp CACTGCCAGCCACATAGGGATCCAGGTGGGCACCAGAAGGTAAAGTaGGTGCCTGAGAGTAACGGAGCTCCAGGGCACTGCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: HCQPHRDPGGHQKVK*VPESNGAPGHCQGE
Trigger: CTCTCCCTGGCAGTGCCCTGGAGCTCCGTTACTCTCAGGCACCCACTTTACCTTCTGGTGCCCACCTGGATCCCTATGTGGCTGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS CCA 90 bp GCCTGGAGCACCCTCCTCCCTGTTCCTCTCCAGGATTCCTCCCTTTaGACTTCCCTTCCCGATGTCACAACGATCGCCGGGCTCCACATG +
Preference number: 5 (lower is better)
Translates to: AWSTLLPVPLQDSSL*TSLPDVTTIAGLHM
Trigger: CATGTGGAGCCCGGCGATCGTTGTGACATCGGGAAGGGAAGTCCAAAGGGAGGAATCCTGGAGAGGAACAGGGAGGAGGGTGCTCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602783.1
CDS-3UTR CAA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAGGAGCAGCCGCGTGTaGTTCCGTTCCGCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLRSSRV*FRSAFS
Trigger: GCTGAAGGCGGAACGGAACAACACGCGGCTGCTCCT...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACAGACTCGCTCAGCAGCTaGTCCACCGTCTCGGACAGC +
Preference number: 5 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTDSLSS*STVSDS
Trigger: GCTGTCCGAGACGGTGGACAAGCTGCTGAGCGAGTC...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp CTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGACCGCTCCCAATCCTaGGAGGGCTCCTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: LLSDEEGRLGPRDWAGKRDRSQS*EGSSLT
Trigger: GGTCAAGGAGGAGCCCTCCAAGGATTGGGAGCGGTC...CCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGGACCGCTCCCAATCCTaGGAGGGCTCCTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLDRSQS*EGSSLT
Trigger: GGTCAAGGAGGAGCCCTCCAAGGATTGGGAGCGGTC...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCCAGGCCCCGGCCCTGTTGTTCCTTCGGTCCTaGTCTCCTGGGCCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: ASSPSQSSSCGLVQAPALLFLRS*SPGPVS
Trigger: GCTGACAGGCCCAGGAGACAAGGACCGAAGGAACAA...CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACATCCTTGGTCTCGGGCTaGGTCGTGGCCGTAAGGGAC +
Preference number: 5 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTSLVSG*VVAVRD
Trigger: GTCCCTTACGGCCACGACCAAGCCCGAGACCAAGGA...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp CGGGCGCGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCCCTAAGGAGATAAGGTaGCTGAATTCCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RARALPLVCTDGPVLGASPKEIR*LNSFSR
Trigger: TCTGGAGAAGGAATTCAGCAACCTTATCTCCTTAGG...GCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCGCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp CCTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGAGCGGCTGAAAGACTaGGCGCTGTCCTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PPFGRRRKTWAPRLGRKKERLKD*ALSSSS
Trigger: GCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTC...CTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GGGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTCCAGTTCATGTGGTTaGGTCCAGGCCCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GRDFFLPASSPSQSSSCGSSSCG*VQAPAL
Trigger: CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGA...ACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp CCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGGGGTATGCCAGGATGGGCTaGGTCGTGGCCGTAAGGGAC +
Preference number: 5 (lower is better)
Translates to: PFGRRRKTWAPRLGRKKGYARMG*VVAVRD
Trigger: GTCCCTTACGGCCACGACCAAGCCCATCCTGGCATA...CCCCTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602351.5
ENST00000602848.5
CDS-3UTR CAA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGATTGTTCCTTCGGTCCTaGTCTCCTGGGCCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERLFLRS*SPGPVS
Trigger: GCTGACAGGCCCAGGAGACAAGGACCGAAGGAACAA...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGTCCGTGTCTGACAGGTaGGCCATGATGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLSVSDR*AMMAPL
Trigger: GAGCGGTGCCATCATGGCCAACCTGTCAGACACGGA...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp CGCGCACTCCCGCTGGTCTGTACAGATGGTCCAGTCCTCGGCGCGAGCTCCCCCCCTAAGGAGATAAGGTaGCTGAATTCCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RALPLVCTDGPVLGASSPPKEIR*LNSFSR
Trigger: TCTGGAGAAGGAATTCAGCAACCTTATCTCCTTAGG...GGGGGAGCTCGCGCCGAGGACTGGACCATCTGTACAGACCAGCGGGAGTGCGCG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp AGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTGGGCCCGCTGCAGCTCTaGATTCTTCTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RILPCKPRSQRRRGSAILGPLQL*ILLFQL
Trigger: CAGCTGGAAGAGAAGAATCAAGAGCTGCAGCGGGCC...CAGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TCCTTCGGTCCTTGTCTCCTGGGCCTGTCAGCTTGGCTAGCCCCAGAGGGTCAGGCCAAGAGCTGCTCCTaGTTTAGCAGCAACTCATCC +
Preference number: 5 (lower is better)
Translates to: SFGPCLLGLSAWLAPEGQAKSCS*FSSNSS
Trigger: GGATGAGTTGCTGCTAAACAAGGAGCAGCTCTTGGC...CTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGACCGCTCCCAATCCTaGGAGGGCTCCTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFDRSQS*EGSSLT
Trigger: GGTCAAGGAGGAGCCCTCCAAGGATTGGGAGCGGTC...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CCTCCTTTCGGACGAAGAAGGAAGACTTGGGCCCCGCGACTGGGCAGGAAAAAGTTGTTCCTTCGGTCCTaGTCTCCTGGGCCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: PPFGRRRKTWAPRLGRKKLFLRS*SPGPVS
Trigger: GCTGACAGGCCCAGGAGACAAGGACCGAAGGAACAA...CTTTTTCCTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGTCCGAAAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CCAGGATGGGGAGCGGCTGAAAGACTTGGCGCTGTCCTCGTCCAGCCGCCTGTCAGTTCATGCTTCCTCTaGTTCCTTCGGTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: PGWGAAERLGAVLVQPPVSSCFL*FLRSLS
Trigger: AGACAAGGACCGAAGGAACAAGAGGAAGCATGAACT...GACAGGCGGCTGGACGAGGACAGCGCCAAGTCTTTCAGCCGCTCCCCATCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GTGGCCGTAAGGGACTCCATCTCCTCGTGTGTCATCCACACGTTTCCTGTGGAAATGGCGAGGCGTAGCTaGAGTCGGTGCAGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: VAVRDSISSCVIHTFPVEMARRS*SRCSGL
Trigger: CAACCCGCTGCACCGACTCAAGCTACGCCTCGCCAT...TTCCACAGGAAACGTGTGGATGACACACGAGGAGATGGAGTCCCTTACGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GGGCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTCCCATGACCCGCTCATaGGACCACACCATCACGTCT +
Preference number: 5 (lower is better)
Translates to: GRDFFLPASSPSQSSSCGPMTRS*DHTITS
Trigger: AGACGTGATGGTGTGGTCCAATGAGCGGGTCATGGG...ACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTTCCAGTTCATGTGGTTaGGTCCAGGCCCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFSSSCG*VQAPAL
Trigger: CAGGGCCGGGGCCTGGACCAAACCACATGAACTGGA...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTACGAAGAAGGAAGACTaGGGCCCCGCGACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFTKKED*GPATGQ
Trigger: CTGCCCAGTCGCGGGGCCCAAGTCTTCCTTCTTCGT...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACATTCTCCAGTTTGTCGTaGGCGTCGTGCAGAGACGTG +
Preference number: 5 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTFSSLS*ASCRDV
Trigger: CACGTCTCTGCACGACGCCAACGACAAACTGGAGAA...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGAAACTCGTTCTCCAGTTaGTCGTTGGCGTCGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERNSFSS*SLASCR
Trigger: TCTGCACGACGCCAACGACAAACTGGAGAACGAGTT...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTTGCTGCAGCTTCTGCTaGGCGTCGTCCAACCACTCG +
Preference number: 5 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFCCSFC*ASSNHS
Trigger: CGAGTGGTTGGACGACGCCAAGCAGAAGCTGCAGCA...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTTCCGTGTCTGACAGGTaGGCCATGATGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFSVSDR*AMMAPL
Trigger: GAGCGGTGCCATCATGGCCAACCTGTCAGACACGGA...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCTCCTTGGTCTCGGGCTaGGTCGTGGCCGTAAGGGAC +
Preference number: 5 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVSLVSG*VVAVRD
Trigger: GTCCCTTACGGCCACGACCAAGCCCGAGACCAAGGA...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS CCA 90 bp CCTGGACAGCGGAGTGAGTGTTGGGCTGGAAGAATTCCTTGTGGATaGTGTAAGAGGAGACGGACTCAGGCTTTCAGGCCTCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PGQRSECWAGRIPCG*CKRRRTQAFRPPEP
Trigger: TGGCTCTGGAGGCCTGAAAGCCTGAGTCCGTCTCCTCTTACACCATCCACAAGGAATTCTTCCAGCCCAACACTCACTCCGCTGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602716.5
CDS-3UTR CAA 90 bp GAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTCTAACTCGTTCTCCAGTTaGTCGTTGGCGTCGTGCAGA +
Preference number: 5 (lower is better)
Translates to: EDSPMQTPEPEEKGKRHSNSFSS*SLASCR
Trigger: TCTGCACGACGCCAACGACAAACTGGAGAACGAGTT...AGAATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp CTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGAATTCCGGCCCGCTGCAGCTCTaGATTCTTCTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LSSSSRLSVPKEIRLLNSGPLQL*ILLFQL
Trigger: CAGCTGGAAGAGAAGAATCAAGAGCTGCAGCGGGCC...GGAATTCAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGAGTTCATGCTTCCTCTaGTTCCTTCGGTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPSSCFL*FLRSLS
Trigger: AGACAAGGACCGAAGGAACAAGAGGAAGCATGAACT...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS CCA 90 bp GATCTGGACATTCGGCTCAATCCTTTCCCTGTCTCCTTCATTCACTaGGACTGGAAGTTTGAAGGTCCCGCCCTCCCTGCTAAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: DLDIRLNPFPVSFIH*DWKFEGPALPAKSR
Trigger: GCGGGACTTAGCAGGGAGGGCGGGACCTTCAAACTTCCAGTCCCAGTGAATGAAGGAGACAGGGAAAGGATTGAGCCGAATGTCCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602492.5
CDS-3UTR CAA 90 bp GGAAAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCAGAGACTTTAGAGCTTaGAGCACTTCTACCTCCGAG +
Preference number: 5 (lower is better)
Translates to: GKRILPCKPRSQRRRGSARDFRA*STSTSE
Trigger: CTCGGAGGTAGAAGTGCTCAAAGCTCTAAAGTCTCT...GGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp TTGGCGCTGTCCTCGTCCAGCCGCCTGTCTGTGCCTAAGGAGATAAGGTTGCTGCGATACAACGACTCCTaGCTAGCTAACTCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LALSSSSRLSVPKEIRLLRYNDS*LANSFS
Trigger: GGAGAACGAGTTAGCTAGCAAGGAGTCGTTGTATCG...CAGCAACCTTATCTCCTTAGGCACAGACAGGCGGCTGGACGAGGACAGCGCCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp ACGCCACGTCGCCCAGCGGCATCGTGGAAAGAGGATTCTCCCATGCAAACCCCGCCTAAGGAGATAAGGTaGCTGAATTCCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TPRRPAASWKEDSPMQTPPKEIR*LNSFSR
Trigger: TCTGGAGAAGGAATTCAGCAACCTTATCTCCTTAGG...CGGGGTTTGCATGGGAGAATCCTCTTTCCACGATGCCGCTGGGCGACGTGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS CCA 90 bp GCTGCTCCTTGTTTAGCAGCAACTCATCCTGAAGCTTCTTCATGTTaGCTATCTCCTCGCTCAGGGAGTTCTTCTCCTCCAGCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: AAPCLAATHPEASSC*LSPRSGSSSPPAPP
Trigger: TGGGGGCGCTGGAGGAGAAGAACTCCCTGAGCGAGGAGATAGCCAACATGAAGAAGCTTCAGGATGAGTTGCTGCTAAACAAGGAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS-3UTR CAA 90 bp GGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTTTCTCCAGTTTGTCGTaGGCGTCGTGCAGAGACGTG +
Preference number: 5 (lower is better)
Translates to: GFLPPRFFPLSVQFMWFGFSSLS*ASCRDV
Trigger: CACGTCTCTGCACGACGCCAACGACAAACTGGAGAA...ACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GCGGGATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGCCAAGAGCTGCTCCTaGTTTAGCAGCAACTCATCC +
Preference number: 5 (lower is better)
Translates to: AGFLPPRFFPLSVQFMWFAKSCS*FSSNSS
Trigger: GGATGAGTTGCTGCTAAACAAGGAGCAGCTCTTGGC...AAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GATTTCTTCCTCCCCGCTTCTTCCCCCTCTCAGTCCAGTTCATGTGGTTTGGTCAAGGAAAGCGGACGTTaGGGGCGGGATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: DFFLPASSPSQSSSCGLVKESGR*GRDFFL
Trigger: GAGGAAGAAATCCCGCCCCAAACGTCCGCTTTCCTT...GACCAAACCACATGAACTGGACTGAGAGGGGGAAGAAGCGGGGAGGAAGAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602848.5
ENST00000602897.1
CDS-3UTR CAA 90 bp AGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTGATGATTTTGATCTCCTaGTTGATGGCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSFSRNIFRQDGERLKDLMILIS*LMASSC
Trigger: GCAGCTGGAGGCCATCAACAAGGAGATCAAAATCAT...CAAGTCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp TCGGAGGTCCTTCTCCCGGAACATCTTCCGCCAGGATGGGGAGCGGCTGAAAGACTTAGGGACATGATTTaGATCTCCTTGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: SEVLLPEHLPPGWGAAERLRDMI*ISLLMA
Trigger: GGCCATCAACAAGGAGATCAAAATCATGTCCCTAAG...TCTTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGGGAGAAGGACCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS-3UTR CAA 90 bp AAGAGGATTCTCCCATGCAAACCCCGGAGCCAGAGGAGAAGGGGAAGCGCCATTTGTCTCCTTCTCCTCTaGGATCAGCTTGATCTCCTT +
Preference number: 5 (lower is better)
Translates to: KRILPCKPRSQRRRGSAICLLLL*DQLDLL
Trigger: AAGGAGATCAAGCTGATCCAAGAGGAGAAGGAGACA...AATGGCGCTTCCCCTTCTCCTCTGGCTCCGGGGTTTGCATGGGAGAATCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS-3UTR CAA 90 bp GCAACATCTCAGCTGAGTCGGGAGTTACGCCTCGGAGGTCCTTCTCCCGGAACACCTAAGGAGATAAGGTaGCTGAATTCCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ATSQLSRELRLGGPSPGTPKEIR*LNSFSR
Trigger: TCTGGAGAAGGAATTCAGCAACCTTATCTCCTTAGG...TGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCCGACTCAGCTGAGATGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602655.5
CDS CCA 90 bp TCCTTCGTCAGAGCTGCAAACTCCTGTCCAGACATTGGCAGGATCTaGACATTCGGCTCAATCCTTTCCCTGTCTCCTTCATTCACTGGG +
Preference number: 5 (lower is better)
Translates to: SFVRAANSCPDIGRI*TFGSILSLSPSFTG
Trigger: CCCAGTGAATGAAGGAGACAGGGAAAGGATTGAGCCGAATGTCCAGATCCTGCCAATGTCTGGACAGGAGTTTGCAGCTCTGACGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602492.5
ENST00000602716.5
CDS CCA 72 bp CAGCGGCCGGGGCCCGGCTCTGTCGCTTCGGAGCCCTaGAGCCCTGTCTCCGACGCTCGCGCGGGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: QRPGPGSVASEP*SPVSDARAGSA
Trigger: CGCGGAGCCCGCGCGAGCGTCGGAGACAGGGCTCCAGGGCTCCGAAGCGACAGAGCCGGGCCCCGGCCGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334186.9
CDS GCA 72 bp GCGCAGCCGCAGCTGCGCTGTAGCCAACCCGTCCTGTaGCTCGCGCAGCGTCTCCAGCAGGCGCTCGCGCTC +
Preference number: 6 (lower is better)
Translates to: AQPQLRCSQPVL*LAQRLQQALAL
Trigger: GAGCGCGAGCGCCTGCTGGAGACGCTGCGCGAGGCACAGGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602509.5
ENST00000602655.5
CDS TCA 72 bp GCCCCTGTCCCGCCCAGACCTGGGGCAGCGCGATGCTaGGCTGGCGCTGCAGCGAGTCCTTCTCGTGGCCGA +
Preference number: 6 (lower is better)
Translates to: APVPPRPGAARC*AGAAASPSRGR
Trigger: TCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGTCTGGGCGGGACAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602492.5
CDS GCA 72 bp GCCCAGACCTGGGGCAGCGCGATGCTGAGCTGGCGCTaGAGCGAGTCCTTCTCGTGGCCGAGCTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: AQTWGSAMLSWR*SESFSWPSSRS
Trigger: GCTGCGCGAGCTCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGTCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602492.5
CDS GCA 72 bp GAGTCCTTCTCGTGGCCGAGCTCGCGCAGCCGCAGCTaGGCTGTAGCCAACCCGTCCTGTGCCTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: ESFSWPSSRSRS*AVANPSCASRS
Trigger: GCTGCGCGAGGCACAGGACGGGTTGGCTACAGCGCAGCTGCGGCTGCGCGAGCTCGGCCACGAGAAGGACTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602509.5
ENST00000602655.5
CDS CCA 72 bp GCGATGCTGAGCTGGCGCTGCAGCGAGTCCTTCTCGTaGCCGAGCTCGCGCAGCCGCAGCTGCGCTGTAGCC +
Preference number: 6 (lower is better)
Translates to: AMLSWRCSESFS*PSSRSRSCAVA
Trigger: GGCTACAGCGCAGCTGCGGCTGCGCGAGCTCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602492.5
ENST00000602509.5
ENST00000602655.5
CDS CCA 72 bp TGTCCCGCCCAGACCTGGGGCAGCGCGATGCTGAGCTaGCGCTGCAGCGAGTCCTTCTCGTGGCCGAGCTCG +
Preference number: 6 (lower is better)
Translates to: CPAQTWGSAMLS*RCSESFSWPSS
Trigger: CGAGCTCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGTCTGGGCGGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602492.5
CDS GCA 72 bp GCAAACTCCTGGGGCAGCGCGATGCTGAGCTGGCGCTaGAGCGAGTCCTTCTCGTGGCCGAGCTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: ANSWGSAMLSWR*SESFSWPSSRS
Trigger: GCTGCGCGAGCTCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGAGTTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602509.5
ENST00000602655.5
CDS CCA 72 bp GGCGGCGGTGCGGGCATCAGGTCCGACGGGTCCAGCTaGCCCGGCGGAAAGCAGGAGGGACTTTCACTCAGT +
Preference number: 6 (lower is better)
Translates to: GGGAGIRSDGSS*PGGKQEGLSLS
Trigger: ACTGAGTGAAAGTCCCTCCTGCTTTCCGCCGGGCCAGCTGGACCCGTCGGACCTGATGCCCGCACCGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602509.5
CDS GCA 72 bp TCGGCCTTGTTGAGCGCCGCCACGCGCTGCGCCAGCTaGGCCTCTATCTCGGGCAAGGTCTCCGCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: SALLSAATRCAS*ASISGKVSAFC
Trigger: GCAGAAAGCGGAGACCTTGCCCGAGATAGAGGCGCAGCTGGCGCAGCGCGTGGCGGCGCTCAACAAGGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS CCA 72 bp CCCGCACCCCCAAGGTCGCCCAGCACGGTCCTCACCTaGAGGCCTGCACTAGCAGGAATAGGTCCGGACCGA +
Preference number: 6 (lower is better)
Translates to: PAPPRSPSTVLT*RPALAGIGPDR
Trigger: TCGGTCCGGACCTATTCCTGCTAGTGCAGGCCTCCAGGTGAGGACCGTGCTGGGCGACCTTGGGGGTGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602897.1
CDS CAA 90 bp GCCTCCTTGAGGTCGCGCTGCAGCTTGGAGTTGGCTTCCTCTGCCTaGCCCAGCTCACGGTGCGCGGTGCCCAACTCCTCCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: ASLRSRCSLELASSA*PSSRCAVPNSSSSW
Trigger: CCAGCTGGAGGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACCTCAAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS GCA 72 bp TGGCTTCCTCTGCCTTGCCCAGCTCACGGTGCGCGGTaGCCAACTCCTCCTCCAGCTGGCTCATCTGACGGC +
Preference number: 6 (lower is better)
Translates to: WLPLPCPAHGAR*PTPPPAGSSDG
Trigger: GCCGTCAGATGAGCCAGCTGGAGGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
ENST00000602726.1
CDS GCA 72 bp GGTCGCGCTGCAGCTTGGAGTTGGCTTCCTCTGCCTTaGCCAGCTCACGGTGCGCGGTGCCCAACTCCTCCT +
Preference number: 6 (lower is better)
Translates to: GRAAAWSWLPLP*PAHGARCPTPP
Trigger: AGGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
ENST00000602726.1
CDS CCA 72 bp AGAGCTGCAAACTCCTGGGGCAGCGCGATGCTGAGCTaGCGCTGCAGCGAGTCCTTCTCGTGGCCGAGCTCG +
Preference number: 6 (lower is better)
Translates to: RAANSWGSAMLS*RCSESFSWPSS
Trigger: CGAGCTCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGAGTTTGCAGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602509.5
ENST00000602655.5
CDS CCA 72 bp AACGCCGTCTGCCCGGGAACTCCCAGAAGTCTGGCCTaGAGGGAGAGCGAGCAGCGGTTCAGCCTGGAGCAC +
Preference number: 6 (lower is better)
Translates to: NAVCPGTPRSLA*RESEQRFSLEH
Trigger: GTGCTCCAGGCTGAACCGCTGCTCGCTCTCCCTCCAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602783.1
CDS CAA 72 bp AGGTCGCGCTGCAGCTTGGAGTTGGCTTCCTCTGCCTaGCCCAGCTCACGGTGCGCGGTGCCCAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: RSRCSLELASSA*PSSRCAVPNSS
Trigger: GGAGGAGTTGGGCACCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
ENST00000602726.1
CDS CAA 72 bp GAAGGTCCCGCCCTCCCTGCTAAGTCCCGCTGTCCCTaGCCACTCAGGCCCCGCCCATTAACGGCAAGCCTC +
Preference number: 6 (lower is better)
Translates to: EGPALPAKSRCP*PLRPRPLTASL
Trigger: GAGGCTTGCCGTTAATGGGCGGGGCCTGAGTGGCAAGGGACAGCGGGACTTAGCAGGGAGGGCGGGACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602492.5
CDS TCA 72 bp TCGTCAGAGCTGCAAACTCCTGGGGCAGCGCGATGCTaGGCTGGCGCTGCAGCGAGTCCTTCTCGTGGCCGA +
Preference number: 6 (lower is better)
Translates to: SSELQTPGAARC*AGAAASPSRGR
Trigger: TCGGCCACGAGAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGAGTTTGCAGCTCTGACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334186.9
ENST00000602351.5
ENST00000602509.5
ENST00000602655.5
CDS TCA 72 bp GGCTTCGCGTGGGGGAGAGGAAGGAGGGTGTCCTCCTaGAGGCCCTGGGCCACACGTTTATGTCCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GFAWGRGRRVSS*RPWATRLCPSC
Trigger: GCAGGAGGGACATAAACGTGTGGCCCAGGGCCTTCAGGAGGACACCCTCCTTCCTCTCCCCCACGCGAAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602800.1
CDS GCA 72 bp CTTGAGGTCGCGCTGCAGCTTGGAGTTGGCTTCCTCTaGCTTGCCCAGCTCACGGTGCGCGGTGCCCAACTC +
Preference number: 6 (lower is better)
Translates to: LEVALQLGVGFL*LAQLTVRGAQL
Trigger: GAGTTGGGCACCGCGCACCGTGAGCTGGGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACCTCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
ENST00000602726.1
CDS CCA 72 bp GTCTGGCCTGGAGGGAGAGCGAGCAGCGGTTCAGCCTaGAGCACCCTCCTCCCTGTTCCTCTCCAGGATTCC +
Preference number: 6 (lower is better)
Translates to: VWPGGRASSGSA*STLLPVPLQDS
Trigger: GGAATCCTGGAGAGGAACAGGGAGGAGGGTGCTCCAGGCTGAACCGCTGCTCGCTCTCCCTCCAGGCCAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602783.1
CDS GCA 72 bp GCACTAGCAGGAATAGGTCCGGACCGAAACGCCGTCTaGCCGGGAACTCCCAGAAGTCTGGCCTGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: ALAGIGPDRNAV*PGTPRSLAWRE
Trigger: CTCCCTCCAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACCTATTCCTGCTAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602783.1
CDS CCA 72 bp TGCTGCGGTAGCGGCCCAACGAGTCCAAGCCAGAGCTaGACACCCGACTCTCCAGCTCCTCTGCCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: CCGSGPTSPSQS*TPDSPAPLPSV
Trigger: AACAGAGGGCAGAGGAGCTGGAGAGTCGGGTGTCCAGCTCTGGCTTGGACTCGTTGGGCCGCTACCGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334186.9
ENST00000602351.5
CDS CAA 90 bp TGGAAGTTTGAAGGTCCCGCCCTCCCTGCTAAGTCCCGCTGTCCCTaGCCACTCAGGCCCCGCCCATTAACGGCAAGCCTCGCCCAGACT +
Preference number: 6 (lower is better)
Translates to: WKFEGPALPAKSRCP*PLRPRPLTASLAQT
Trigger: AGTCTGGGCGAGGCTTGCCGTTAATGGGCGGGGCCTGAGTGGCAAGGGACAGCGGGACTTAGCAGGGAGGGCGGGACCTTCAAACTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602492.5
CDS GCA 72 bp GATGGTGGCCTCCCCCGCAGCTGGTCGATCTCCATCTaGATCCGCTCCATTTCGGCCAAGAGCTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: DGGLPRSWSISI*IRSISAKSCSL
Trigger: CAAGGAGCAGCTCTTGGCCGAAATGGAGCGGATGCAGATGGAGATCGACCAGCTGCGGGGGAGGCCACCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS GCA 72 bp GGAGTCACGGATGAGCTTTCCAGTCCCCTAGACTGCTaGTCCTACGGGTCCCTCCCCACTGGCTGCGCTCTT +
Preference number: 6 (lower is better)
Translates to: GVTDELSSPLDC*SYGSLPTGCAL
Trigger: AAGAGCGCAGCCAGTGGGGAGGGACCCGTAGGAGCAGCAGTCTAGGGGACTGGAAAGCTCATCCGTGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602905.1
CDS GCA 72 bp AGTGGAGTCACGGATGAGCTTTCCAGTCCCCTAGACTaGTGCTCCTACGGGTCCCTCCCCACTGGCTGCGCT +
Preference number: 6 (lower is better)
Translates to: SGVTDELSSPLD*CSYGSLPTGCA
Trigger: AGCGCAGCCAGTGGGGAGGGACCCGTAGGAGCAGCAGTCTAGGGGACTGGAAAGCTCATCCGTGACTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602905.1
CDS CAA 72 bp GACTCCTTGCTAGCTAACTCGTTCTCCAGTTTGTCGTaGGCGTCGTGCAGAGACGTGGCCTCCCGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: DSLLANSFSSLS*ASCRDVASRWA
Trigger: CGCCCAGCGGGAGGCCACGTCTCTGCACGACGCCAACGACAAACTGGAGAACGAGTTAGCTAGCAAGGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS CAA 90 bp CTCTGCCGATACAACGACTCCTTGCTAGCTAACTCGTTCTCCAGTTaGTCGTTGGCGTCGTGCAGAGACGTGGCCTCCCGCTGGGCGCTC +
Preference number: 6 (lower is better)
Translates to: LCRYNDSLLANSFSS*SLASCRDVASRWAL
Trigger: GAGCGCCCAGCGGGAGGCCACGTCTCTGCACGACGCCAACGACAAACTGGAGAACGAGTTAGCTAGCAAGGAGTCGTTGTATCGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS CAA 90 bp AGCCTGGAGCACCCTCCTCCCTGTTCCTCTCCAGGATTCCTCCCTTaGGACTTCCCTTCCCGATGTCACAACGATCGCCGGGCTCCACAT +
Preference number: 6 (lower is better)
Translates to: SLEHPPPCSSPGFLP*DFPSRCHNDRRAPH
Trigger: ATGTGGAGCCCGGCGATCGTTGTGACATCGGGAAGGGAAGTCCAAAGGGAGGAATCCTGGAGAGGAACAGGGAGGAGGGTGCTCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602783.1
CDS CAA 72 bp TACAACGACTCCTTGCTAGCTAACTCGTTCTCCAGTTaGTCGTTGGCGTCGTGCAGAGACGTGGCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: YNDSLLANSFSS*SLASCRDVASR
Trigger: GCGGGAGGCCACGTCTCTGCACGACGCCAACGACAAACTGGAGAACGAGTTAGCTAGCAAGGAGTCGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS TCA 72 bp TCTGAGTGTATCCTAGGGGATGCCTGGACAGCGGAGTaGGTGTTGGGCTGGAAGAATTCCTTGTGGATGGTG +
Preference number: 6 (lower is better)
Translates to: SECILGDAWTAE*VLGWKNSLWMV
Trigger: CACCATCCACAAGGAATTCTTCCAGCCCAACACTCACTCCGCTGTCCAGGCATCCCCTAGGATACACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602716.5
CDS CCA 72 bp CGGAGTGAGTGTTGGGCTGGAAGAATTCCTTGTGGATaGTGTAAGAGGAGACGGACTCAGGCTTTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: RSECWAGRIPCG*CKRRRTQAFRP
Trigger: AGGCCTGAAAGCCTGAGTCCGTCTCCTCTTACACCATCCACAAGGAATTCTTCCAGCCCAACACTCACTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602716.5
CDS CCA 72 bp ATTCGGCTCAATCCTTTCCCTGTCTCCTTCATTCACTaGGACTGGAAGTTTGAAGGTCCCGCCCTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: IRLNPFPVSFIH*DWKFEGPALPA
Trigger: AGCAGGGAGGGCGGGACCTTCAAACTTCCAGTCCCAGTGAATGAAGGAGACAGGGAAAGGATTGAGCCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602492.5
CDS CAA 72 bp CGGCTCTTCTCTTCACTCTGCCGATACAACGACTCCTaGCTAGCTAACTCGTTCTCCAGTTTGTCGTTGGCG +
Preference number: 6 (lower is better)
Translates to: RLFSSLCRYNDS*LANSFSSLSLA
Trigger: CGCCAACGACAAACTGGAGAACGAGTTAGCTAGCAAGGAGTCGTTGTATCGGCAGAGTGAAGAGAAGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334186.9
ENST00000421230.6
ENST00000602351.5
ENST00000602655.5
ENST00000602716.5
CDS CCA 72 bp AGAGCTGCAAACTCCTGTCCAGACATTGGCAGGATCTaGACATTCGGCTCAATCCTTTCCCTGTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: RAANSCPDIGRI*TFGSILSLSPS
Trigger: TGAAGGAGACAGGGAAAGGATTGAGCCGAATGTCCAGATCCTGCCAATGTCTGGACAGGAGTTTGCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602492.5
ENST00000602716.5
CDS CCA 72 bp GATGTGAGAAAAAGGGTGACAGGTAGGGCGGACACATaGAGGAAAAGATGGAGCCATATAAAGGAGCACCGA +
Preference number: 6 (lower is better)
Translates to: DVRKRVTGRADT*RKRWSHIKEHR
Trigger: TCGGTGCTCCTTTATATGGCTCCATCTTTTCCTCCATGTGTCCGCCCTACCTGTCACCCTTTTTCTCACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602726.1
CDS CAA 72 bp GGCACCTGCCATGTACCAGGCAATGTGACTTTGGAGTaGAACAAATTCAGGTTGGAATTGGGACCCTGCCAT +
Preference number: 6 (lower is better)
Translates to: GTCHVPGNVTLE*NKFRLELGPCH
Trigger: ATGGCAGGGTCCCAATTCCAACCTGAATTTGTTCAACTCCAAAGTCACATTGCCTGGTACATGGCAGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602800.1
CDS CAA 72 bp AATGTGACTTTGGAGTTGAACAAATTCAGGTTGGAATaGGGACCCTGCCATGCATTTTGCTGTGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: NVTLELNKFRLE*GPCHAFCCVAL
Trigger: CAGGGCCACACAGCAAAATGCATGGCAGGGTCCCAATTCCAACCTGAATTTGTTCAACTCCAAAGTCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602800.1
CDS CAA 72 bp CCAGGCAATGTGACTTTGGAGTTGAACAAATTCAGGTaGGAATTGGGACCCTGCCATGCATTTTGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: PGNVTLELNKFR*ELGPCHAFCCV
Trigger: CACACAGCAAAATGCATGGCAGGGTCCCAATTCCAACCTGAATTTGTTCAACTCCAAAGTCACATTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602800.1
CDS CAA 90 bp ACTGGTTATGTGAAACCACAAAATCGATGGCGTAATGGAAGATTCTaGATGCATCAAGAGGAACTGGGCTATTTGGGGATGCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: TGYVKPQNRWRNGRF*MHQEELGYLGMQAL
Trigger: CAAAGCCTGCATCCCCAAATAGCCCAGTTCCTCTTGATGCATCAAGAATCTTCCATTACGCCATCGATTTTGTGGTTTCACATAACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602716.5