RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPFIA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131626

Ensembl transcript IDs: ENST00000253925.12, ENST00000389547.7, ENST00000526262.5, ENST00000526347.5, ENST00000526369.3, ENST00000527612.1, ENST00000528284.1, ENST00000528750.1, ENST00000528853.1, ENST00000530294.5, ENST00000530390.5, ENST00000530548.5, ENST00000530798.5, ENST00000532024.1, ENST00000532443.1, ENST00000532504.5, ENST00000532793.1, ENST00000533894.5, ENST00000644155.1, ENST00000648755.1, ENST00000672873.1, ENST00000673366.1

Found 1218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCCCGGAGGGGAGGAGCTAGCAAGCGA +
Preference number: 1 (lower is better)
Translates to: AQSVHFPSWAVRDPS*GGAPTARRGGASKR
Trigger: TCGCTTGCTAGCTCCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR TCA 90 bp AGCCCTTCAGCCTCAGCTCACCAACTTCCATGGGTGGGCCCTGCTTaGCTCCCCCAGCCTGTCAGCGTGTCGCCTCCCCTCTGCCACCCT +
Preference number: 1 (lower is better)
Translates to: SPSASAHQLPWVGPA*LPQPVSVSPPLCHP
Trigger: AGGGTGGCAGAGGGGAGGCGACACGCTGACAGGCTGGGGGAGTCAAGCAGGGCCCACCCATGGAAGTTGGTGAGCTGAGGCTGAAGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp GAGGAAACGGAGACCAAGGTGACGTCGGCAGTGGCCGCTGATGCCTaGTCCAGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAG +
Preference number: 1 (lower is better)
Translates to: EETETKVTSAVAADA*SRWGGGGHGLCESQ
Trigger: CTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCTGGAGCAGGCATCAGCGGCCACTGCCGACGTCACCTTGGTCTCCGTTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp ATCTCGCAGGGCTGCCAGCCGGCCTTTCTGTGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTCTGTGTGGCCGTCTGCCATGGGGAA +
Preference number: 1 (lower is better)
Translates to: ISQGCQPAFLWAPQH*TGAVGVCVAVCHGE
Trigger: TTCCCCATGGCAGACGGCCACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CCA 90 bp AGGTGGCAAAAGGGTCATGACGCCCAGTCTGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGG +
Preference number: 1 (lower is better)
Translates to: RWQKGHDAQSVHFPS*AVRDPSWGGAPTAR
Trigger: CCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTTTTGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
3UTR CCA 90 bp GAGACCAAGGTGACGTCGGCAGTGGCCGCTGATGCCTGCTCCAGGTaGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGG +
Preference number: 1 (lower is better)
Translates to: ETKVTSAVAADACSR*GGGGHGLCESQAQW
Trigger: CCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCTGGAGCAGGCATCAGCGGCCACTGCCGACGTCACCTTGGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp TTCCAGCCCTTCAGCCTCAGCTCACCAACTTCCATGGGTGGGCCCTaGTTGACTCCCCCAGCCTGTCAGCGTGTCGCCTCCCCTCTGCCA +
Preference number: 1 (lower is better)
Translates to: FQPFSLSSPTSMGGP*LTPPACQRVASPLP
Trigger: TGGCAGAGGGGAGGCGACACGCTGACAGGCTGGGGGAGTCAAGCAGGGCCCACCCATGGAAGTTGGTGAGCTGAGGCTGAAGGGCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CCA 90 bp ATCACTAGGAAGGGTCATGACGCCCAGTCTGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGG +
Preference number: 1 (lower is better)
Translates to: ITRKGHDAQSVHFPS*AVRDPSWGGAPTAR
Trigger: CCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTTCCTAGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR CCA 90 bp TACCTTGGAAGGCTCATCTCGCAGGGCTGCCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACTGGTGCTGTAGGAGTCTGTGTGGCC +
Preference number: 1 (lower is better)
Translates to: YLGRLISQGCQPAFL*APQHCTGAVGVCVA
Trigger: GGCCACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAGCCTTCCAAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR GCA 90 bp CCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATGCGTaGATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTTGGGCCCTAC +
Preference number: 1 (lower is better)
Translates to: PRKEAELGNGVKGHA*MRAVHGLGSAFGPY
Trigger: GTAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CCA 90 bp GGGACATGCGTGCATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTTaGGCCCTACCCACCGACTGTGTATGTGAGCCCCCACATTTGCAT +
Preference number: 1 (lower is better)
Translates to: GTCVHARGPRPRLCL*ALPTDCVCEPPHLH
Trigger: ATGCAAATGTGGGGGCTCACATACACAGTCGGTGGGTAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR TCA 90 bp CGAGGTGTCAGCAACGGAGACAGAATGAGGAAACGGAGACCAAGGTaGCGTCGGCAGTGGCCGCTGATGCCTGCTCCAGGTGGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: RGVSNGDRMRKRRPR*RRQWPLMPAPGGVV
Trigger: CACCACCCCACCTGGAGCAGGCATCAGCGGCCACTGCCGACGTCACCTTGGTCTCCGTTTCCTCATTCTGTCTCCGTTGCTGACACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp CCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGG +
Preference number: 1 (lower is better)
Translates to: PVEFLMSLMSSWLTV*SAPLCSRSNRRALG
Trigger: CCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR GCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTaGTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCAC +
Preference number: 1 (lower is better)
Translates to: CLHPLCAPTCRMRAW*LVLALRGATWVSLH
Trigger: GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp ACTGCTTTCTGGGTCTCCTGCCTTCATCCACTGTGTGCGCCGACTTaGAGGATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCC +
Preference number: 1 (lower is better)
Translates to: TAFWVSCLHPLCAPT*RMRAWCLVLALRGA
Trigger: GGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp GCTGCACTGCACTGCTTTCTGGGTCTCCTGCCTTCATCCACTGTGTaGGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTGGCCCT +
Preference number: 1 (lower is better)
Translates to: AALHCFLGLLPSSTV*ADLQDESVVLGAGP
Trigger: AGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR CCA 90 bp TCCTGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTC +
Preference number: 1 (lower is better)
Translates to: SCLHPLCAPTCRMRA*CLVLALRGATWVSL
Trigger: GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR CCA 90 bp CCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTCTAACCGA +
Preference number: 1 (lower is better)
Translates to: PSWEPVEFLMSLMSS*LTVCSAPLCSRSNR
Trigger: TCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR CCA 90 bp TTGACTCCCCCAGCCTGTCAGCGTGTCGCCTCCCCTCTGCCACCCTaGGCTGCTTCACAACTCAGGACCGGATGTGAGCTATTAGGGAAC +
Preference number: 1 (lower is better)
Translates to: LTPPACQRVASPLPP*AASQLRTGCELLGN
Trigger: GTTCCCTAATAGCTCACATCCGGTCCTGAGTTGTGAAGCAGCCCAGGGTGGCAGAGGGGAGGCGACACGCTGACAGGCTGGGGGAGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp CTGCTCATTAAGAGTTTGTACCTTGGAAGGCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGGGCGCCGCAGCACTGCACTGGTGCT +
Preference number: 1 (lower is better)
Translates to: LLIKSLYLGRLISQG*QPAFLWAPQHCTGA
Trigger: AGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR TCA 90 bp CACTGGTGCTGTAGGAGTCTGTGTGGCCGTCTGCCATGGGGAACCTaGAATCTGGGACACTGCCCAAGTGGGGTCGGCCATGATGAAGTG +
Preference number: 1 (lower is better)
Translates to: HWCCRSLCGRLPWGT*NLGHCPSGVGHDEV
Trigger: CACTTCATCATGGCCGACCCCACTTGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAGACGGCCACACAGACTCCTACAGCACCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CCA 90 bp TGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACTGAGGTaGGAGGAGGGGAAGGGACACTTGCTGGTGTCTGGCTTTCCTCTT +
Preference number: 1 (lower is better)
Translates to: WPWALRIPGSMATLR*EEGKGHLLVSGFPL
Trigger: AAGAGGAAAGCCAGACACCAGCAAGTGTCCCTTCCCCTCCTCCCACCTCAGTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR TCA 90 bp CTCCCCTCTGCCACCCTGGGCTGCTTCACAACTCAGGACCGGATGTaGGCTATTAGGGAACCAGGCTTCCTGATTTCCAGAGGCCATCAG +
Preference number: 1 (lower is better)
Translates to: LPSATLGCFTTQDRM*AIREPGFLISRGHQ
Trigger: CTGATGGCCTCTGGAAATCAGGAAGCCTGGTTCCCTAATAGCTCACATCCGGTCCTGAGTTGTGAAGCAGCCCAGGGTGGCAGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp ATAAGGCCTTTATTAGAGCTGCACTGCACTGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGG +
Preference number: 1 (lower is better)
Translates to: IRPLLELHCTAFWVS*LHPLCAPTCRMRAW
Trigger: CCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAAAGGCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR CCA 90 bp ACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAACT +
Preference number: 1 (lower is better)
Translates to: TEGLSGRKAGRFHTL*LSCHLVPLLWKVAT
Trigger: AGTTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
3UTR CCA 90 bp GATCAGCAAACACAGGTTCGAAACAGGAAAGCACTGAACACCCGATaGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGAC +
Preference number: 1 (lower is better)
Translates to: DQQTQVRNRKALNTR*LPERNVPGHTDPRD
Trigger: GTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCGGGTGTTCAGTGCTTTCCTGTTTCGAACCTGTGTTTGCTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR TCA 90 bp CCTGTGTGTTCTGCGTCGGGATCTGTAACAGCAGTGCCAGTGCACTaGAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGTGAACAC +
Preference number: 1 (lower is better)
Translates to: PVCSASGSVTAVPVH*SRRFHLRPEVLREH
Trigger: GTGTTCACGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCTGTTACAGATCCCGACGCAGAACACACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR CCA 90 bp ACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAAAA +
Preference number: 1 (lower is better)
Translates to: TEGLSGRKAGRFHTL*LSCHLVPLLWKVAK
Trigger: TTTTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
3UTR TCA 90 bp TTAAGCAGGAAGATCAGCAAACACAGGTTCGAAACAGGAAAGCACTaGACACCCGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTG +
Preference number: 1 (lower is better)
Translates to: LSRKISKHRFETGKH*TPDGCLRETSQDTL
Trigger: CAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCGGGTGTTCAGTGCTTTCCTGTTTCGAACCTGTGTTTGCTGATCTTCCTGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp ACCATCAGACACGTCAGCATCACTCTCGAATGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTGGGCACGTTCCCAATCCTGCTCATT +
Preference number: 1 (lower is better)
Translates to: TIRHVSITLECLCYI*QDTSLLGTFPILLI
Trigger: AATGAGCAGGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCTGACGTGTCTGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR GCA 90 bp CAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTaGACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTT +
Preference number: 1 (lower is better)
Translates to: QKPTEKTGCLCLWIC*TINTTPWSDTLCWL
Trigger: AAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp AAGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTaGTGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGG +
Preference number: 1 (lower is better)
Translates to: KQKPTEKTGCLCLWI*CTINTTPWSDTLCW
Trigger: CCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR CCA 90 bp ATAAGAAAAATAAGGCCTTTATTAGAGCTGCACTGCACTGCTTTCTaGGTCTCCTGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATG +
Preference number: 1 (lower is better)
Translates to: IRKIRPLLELHCTAF*VSCLHPLCAPTCRM
Trigger: CATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAAAGGCCTTATTTTTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR GCA 90 bp GATTTACATAAGAAAAATAAGGCCTTTATTAGAGCTGCACTGCACTaGTTTCTGGGTCTCCTGCCTTCATCCACTGTGTGCGCCGACTTG +
Preference number: 1 (lower is better)
Translates to: DLHKKNKAFIRAALH*FLGLLPSSTVCADL
Trigger: CAAGTCGGCGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAAAGGCCTTATTTTTCTTATGTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR TCA 90 bp GGCCTGTCACAGACACAAATTTACAAGTATGCCTCAGTCTCTCTCTaGGAACACAGACGAATACTGAGCTTTATTAGTTGGAAAAATATG +
Preference number: 1 (lower is better)
Translates to: GLSQTQIYKYASVSL*EHRRILSFISWKNM
Trigger: CATATTTTTCCAACTAATAAAGCTCAGTATTCGTCTGTGTTCTCAGAGAGAGACTGAGGCATACTTGTAAATTTGTGTCTGTGACAGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
3UTR GCA 90 bp AAAGATTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATaGTGCATAATCATCTGTAGAAGTAGTGTGGGTAAACAACAGGAG +
Preference number: 1 (lower is better)
Translates to: KDSTGFQNVVFVGFK*CIIICRSSVGKQQE
Trigger: CTCCTGTTGTTTACCCACACTACTTCTACAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGGAGGGGAGGGGCTGGTCAGCGACATaGTCTCCTGGATGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: LGCEGSFVGWSAHCPEGRGWSAT*SPGWPA
Trigger: GGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCC...CCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp CTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGGAGGGGAGGAGAGCTGCACTGCACTaGTTTCTGGGTCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: LGCEGSFVGWSAHCPEGRRAALH*FLGLLP
Trigger: AGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCT...CCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp GTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 2 (lower is better)
Translates to: VEFLMSLMSSWLTVCSAPVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...AGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp ATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 2 (lower is better)
Translates to: MSLMSSWLTVCSAPLCSRRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...CCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR CAA 90 bp CTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGG +
Preference number: 2 (lower is better)
Translates to: LMSLMSSWLTVCSAP*CSRSNRRALGEEGG
Trigger: CCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp GAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 2 (lower is better)
Translates to: EFLMSLMSSWLTVCSAPLVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...CAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACT +
Preference number: 2 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHQPAFL*APQHCT
Trigger: AGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR TCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTCCCGAGCTGGGCTGTaGGGGATCCTTCGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPSRAGL*GILRGV
Trigger: CACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGA...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACTGGGAGCCACCTTTGTaGGCAGGCAGGGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RAWCLVLALRGATWVSLHWEPPL*AGRESR
Trigger: CCTGCTCTCCCTGCCTGCTCACAAAGGTGGCTCCCA...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGGTGTCGCCTCCCCTCTaGCACCCTGGGCTGCTTCAC +
Preference number: 2 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEVSPPL*HPGLLH
Trigger: GTGAAGCAGCCCAGGGTGGCAGAGGGGAGGCGACAC...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACTGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTC +
Preference number: 2 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHWAPQH*TGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCA...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CCA 90 bp TGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGATCTCCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 2 (lower is better)
Translates to: CGRSRCGRGRRAGQRHDLRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...GAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCC +
Preference number: 2 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEVRDPS*GGAPTA
Trigger: GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCAC...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCGGGTGGTGGTGGCCATaGGCTCTGCGAATCCCAGGC +
Preference number: 2 (lower is better)
Translates to: MRAWCLVLALRGATWVSLGWWWP*ALRIPG
Trigger: GCCTGGGATTCGCAGAGCCCATGGCCACCACCACCC...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CAA 90 bp CTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACCCG +
Preference number: 2 (lower is better)
Translates to: LHPLCAPTCRMRAWC*VLALRGATWVSLHP
Trigger: CGGGTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGCGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 2 (lower is better)
Translates to: LTHVTARATQTRCQQRRQRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR GCA 90 bp CTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGGAGGGGAGGTCGACCATTTTCAGCTaGCCTCGAAGGTCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: LGCEGSFVGWSAHCPEGRSTIFS*PRRSFL
Trigger: CAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGA...CCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACCTAAGGGGAGCCACATaGGTGTCTCTCCACCCGCTC +
Preference number: 2 (lower is better)
Translates to: RAWCLVLALRGATWVSLHLRGAT*VSLHPL
Trigger: GAGCGGGTGGAGAGACACCCATGTGGCTCCCCTTAG...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp GGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 2 (lower is better)
Translates to: GVAHGTILGACGVPYVPDRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...ATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGGGCAGGGAGAGCAGGTaGGAGTGTGAAGCCAGCACC +
Preference number: 2 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEGRESR*ECEAST
Trigger: GGTGCTGGCTTCACACTCCCACCTGCTCTCCCTGCC...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CAA 90 bp CACTGCTTTCTGGGTCTCCTGCCTTCATCCACTGTGTGCGCCGACTaGCAGGATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: HCFLGLLPSSTVCAD*QDESVVLGAGPKGS
Trigger: GCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGCCGAGTCTCTCCAGCTaGGAGAACTGCTCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEPSLSS*ENCSQL
Trigger: GAGCTGGGAGCAGTTCTCTCAGCTGGAGAGACTCGG...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGCGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 2 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACTGTGCAGGGGGTTGCTaGTGCCAATCTCACGCTGGA +
Preference number: 2 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHCAGGC*CQSHAG
Trigger: TCCAGCGTGAGATTGGCATCAGCAACCCCCTGCACA...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 2 (lower is better)
Translates to: RAWCLVLALRGATWVSLHGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGGCTCAATGGCAACACTaGGGTGGGAGGAGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVAQWQH*GGRRGR
Trigger: CCTTCCCCTCCTCCCACCTCAGTGTTGCCATTGAGC...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGAGGATGAGAGCGTGGTaGTTGGTGCTGGCCCTAAGG +
Preference number: 2 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTRMRAW*LVLALR
Trigger: CCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCT...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp CGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: RRALGEEGGEVSHFMVVLIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...CAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp CTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGGAGGGGAGGATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: LGCEGSFVGWSAHCPEGRISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...CCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCGCTGGACACGCCTGCTaGAGACTGCGCTTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPAGHAC*RLRLSL
Trigger: AAGAGACAAGCGCAGTCTCCAGCAGGCGTGTCCAGC...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACGGTCATGCACAGATGTaGCTTCACGCTGTGCAGCGA +
Preference number: 2 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHGHAQM*LHAVQR
Trigger: TCGCTGCACAGCGTGAAGCCACATCTGTGCATGACC...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR TCA 90 bp GTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: VEFLMSLMSSWLTVCSAPAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...AGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 2 (lower is better)
Translates to: RAWCLVLALRGATWVSLHSPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp ATTTCCTGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 2 (lower is better)
Translates to: ISCGRSRCGRGRRAGQRHGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...ATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACCACTGCACTGCTTTCTaGGTCTCCTGCCTTCATCCA +
Preference number: 2 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHHCTAF*VSCLHP
Trigger: TGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTG...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGCACAGTCTCAGCCACTaGAGACAAGCTCCCCAAATC +
Preference number: 2 (lower is better)
Translates to: LTHVTARATQTRCQQRRQHSLSH*RQAPQI
Trigger: GATTTGGGGAGCTTGTCTTCAGTGGCTGAGACTGTG...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGTACCACGCCATGGTCTaGCACACTTTGCTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: LTHVTARATQTRCQQRRQYHAMV*HTLLAC
Trigger: ACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTA...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CTGGCATCCCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 2 (lower is better)
Translates to: LASQPRALARPQPLARPISPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...AATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGGGATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp TGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGATCTCAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 2 (lower is better)
Translates to: CGRSRCGRGRRAGQRHDLSPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...GAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACCACCGACTGTGTATGTaGGCCCCCACATTTGCATTT +
Preference number: 2 (lower is better)
Translates to: RAWCLVLALRGATWVSLHHRLCM*APTFAF
Trigger: AAATGCAAATGTGGGGGCTCACATACACAGTCGGTG...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCGGAAGGAAGCAGAGCTaGGAAACGGTGTTAAGGGAC +
Preference number: 2 (lower is better)
Translates to: MRAWCLVLALRGATWVSLGRKQS*ETVLRD
Trigger: GTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCC...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 2 (lower is better)
Translates to: PSSTVCADLQDESVVLGASPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp ATTTCCTGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATTCCAGTTCTGTCACATaGCTGGAAAGGGAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ISCGRSRCGRGRRAGQRHSSSVT*LEREAR
Trigger: CCTGGCTTCCCTTTCCAGTCATGTGACAGAACTGGA...ATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR GCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACTGAAAAGACAGGCTaGCTCTGTCTCTGGATCTGC +
Preference number: 2 (lower is better)
Translates to: HTDPRDSTCHSDEVSATETEKTG*LCLWIC
Trigger: GCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGT...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: RLSRLPLPTRLSISSARCIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGC +
Preference number: 2 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEVLMLL*QFVQVG
Trigger: GCCGACCTGGACAAACTGGCAAAGAAGCATTAGGAC...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR GCA 90 bp GGAAGTTTGCAGGGAGAGTCTCTGCTGACCCAGCAGCTAAGCCACGAATGTCCTCTCAGCTTCAGCCTGTaGAGGGGGTTGCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: GSLQGESLLTQQLSHECPLSFSL*RGLLMP
Trigger: TGGCATCAGCAACCCCCTGCACAGGCTGAAGCTGAG...AGGACATTCGTGGCTTAGCTGCTGGGTCAGCAGAGACTCTCCCTGCAAACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACGGCTGCCTCTGTCTCTaGATCTGCTGCACAATAAAT +
Preference number: 2 (lower is better)
Translates to: RAWCLVLALRGATWVSLHGCLCL*ICCTIN
Trigger: ATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCC...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGTTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 2 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLLWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCTTATTAGAGCTGCACTaGACTGCTTTCTGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: MRAWCLVLALRGATWVSLLLELH*TAFWVS
Trigger: GGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAA...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGCAGTGCCAGTGCACTGAAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGCGTTTGCGGCGTGGCTaGGAGCGTTTCCATCTCTTC +
Preference number: 2 (lower is better)
Translates to: SSASALKSKVSSKARSAPRLRRG*ERFHLF
Trigger: GAAGAGATGGAAACGCTCGCAGCCACGCCGCAAACG...CGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp CTGGCATCCCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTCATCTGCATCTTCTTTaGCTGCATAGAGGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: LASQPRALARPQPLARPIHLHLL*LHRGGR
Trigger: TCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATG...AATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGGGATGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: MRAWCLVLALRGATWVSLPLSLM*SSSALS
Trigger: ACTGAGGGCTGAACTAGACCACATGAGACTAAGAGG...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR TCA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATCACAGTCTCAGCCACTaGAGACAAGCTCCCCAAATC +
Preference number: 2 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHHSLSH*RQAPQI
Trigger: GATTTGGGGAGCTTGTCTTCAGTGGCTGAGACTGTG...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACTGGTCTGACACACTTTaGTGGCTTGTTAATATGCCA +
Preference number: 2 (lower is better)
Translates to: RAWCLVLALRGATWVSLHWSDTL*WLVNMP
Trigger: TGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCA...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: RKAGRFHTLWLSCHLVPLIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...AAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 2 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAATGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 2 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQCSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACCTGCACTTCATCTCCTaGCTGCTTTATTCTGTCAAT +
Preference number: 2 (lower is better)
Translates to: RAWCLVLALRGATWVSLHLHFIS*LLYSVN
Trigger: ATTGACAGAATAAAGCAGCCAGGAGATGAAGTGCAG...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp GGAAGTTTGCAGGGAGAGTCTCTGCTGACCCAGCAGCTAAGCCACGAATGTCCTGGAAGGGACACTTGCTaGTGTCTGGCTTTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: GSLQGESLLTQQLSHECPGRDTC*CLAFLL
Trigger: CAAGAGGAAAGCCAGACACCAGCAAGTGTCCCTTCC...AGGACATTCGTGGCTTAGCTGCTGGGTCAGCAGAGACTCTCCCTGCAAACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CAA 90 bp GAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAACTTTC +
Preference number: 2 (lower is better)
Translates to: EGLSGRKAGRFHTLW*SCHLVPLLWKVATF
Trigger: GAAAGTTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp TGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGATCTCTTATTTCAGGATGATTaGTGTAGAGCTAGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: CGRSRCGRGRRAGQRHDLLFQDD*CRARLR
Trigger: ACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAA...GAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACC +
Preference number: 2 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLARSQS*SLRVCT
Trigger: GGTACAAACTCTTAATGAGCAGGATTGGGAACGTGC...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACCTCAGTATTCTTCATTaGCAGTGGAAAATGCTTCAG +
Preference number: 2 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHLSILH*QWKMLQ
Trigger: CTGAAGCATTTTCCACTGCCAATGAAGAATACTGAG...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CAA 90 bp GCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAACTTTCTACGA +
Preference number: 2 (lower is better)
Translates to: ALGEEGGEVSHFMVV*SSRTSSLEGGNFLR
Trigger: TCGTAGAAAGTTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCCTCTCATTAGATTCTaGAAGCAGCTTGTCAACAGT +
Preference number: 2 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVPLIRF*KQLVNS
Trigger: ACTGTTGACAAGCTGCTTTCAGAATCTAATGAGAGG...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR GCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCTCTGTTCCCTTGACTaGTTACTTATGATTTCTTGG +
Preference number: 2 (lower is better)
Translates to: MRAWCLVLALRGATWVSLLCSLD*LLMISW
Trigger: CCAAGAAATCATAAGTAAGCAGTCAAGGGAACAGAG...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCTCCAGGTGGGGTGGTaGTGGCCATGGGCTCTGCGA +
Preference number: 2 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMLQVGW*WPWALR
Trigger: TCGCAGAGCCCATGGCCACCACCACCCCACCTGGAG...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp CTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGGCTCTAACAGCAGCCTaGTGTTATTCCTTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: LTEGLSGRKAGRFHTLWLALTAA*CYSFLL
Trigger: AAGCAGAAAGGAATAACACCAGGCTGCTGTTAGAGC...CAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR GCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 2 (lower is better)
Translates to: FMLQNKASLARKSTVKVSVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp TGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGCGCTAAGAGACCGCTCATaGCTGGAGACAAGGCATTCC +
Preference number: 2 (lower is better)
Translates to: CFFASLSRSALFFLAKQALRDRS*LETRHS
Trigger: GGAATGCCTTGTCTCCAGGCATGAGCGGTCTCTTAG...CGCTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CCA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGTCTGACACACTTTGCTaGCTTGTTAATATGCCATTT +
Preference number: 2 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTSDTLC*LVNMPF
Trigger: AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGA...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGGGCAGGGAGAGCAGGTaGGAGTGTGAAGCCAGCACC +
Preference number: 2 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMGRESR*ECEAST
Trigger: GGTGCTGGCTTCACACTCCCACCTGCTCTCCCTGCC...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATTTATTTCAGGATGATTaGTGTAGAGCTAGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHLFQDD*CRARLR
Trigger: ACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAA...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGCAGTGCCAGTGCACTGAAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGTGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: SSASALKSKVSSKARSAPCLCYI*QDTSLL
Trigger: CAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCA...CGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGTTACACAATCCAAAATaGCTAGAGCATCAAAGTCTA +
Preference number: 2 (lower is better)
Translates to: HTDPRDSTCHSDEVSATELHNPK*LEHQSL
Trigger: TAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAA...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 2 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp CTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGACAGCATCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 2 (lower is better)
Translates to: LLSVPMTKRLLNSLSKTASLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...TGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp CTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGACAGCATGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 2 (lower is better)
Translates to: LLSVPMTKRLLNSLSKTACSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...TGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTACCAACTTCCATGGGTaGGCCCTGCTTGACTCCCCC +
Preference number: 2 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFTNFHG*ALLDSP
Trigger: GGGGGAGTCAAGCAGGGCCCACCCATGGAAGTTGGT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCTGTGTGCGCCGACTTaGAGGATGAGAGCGTGGTGC +
Preference number: 2 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGLCAPT*RMRAWC
Trigger: GCACCACGCTCTCATCCTGCAAGTCGGCGCACACAG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCG +
Preference number: 2 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMAFWVS*LHPLCA
Trigger: CGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGC...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGAGAGCTGCACTGCACTaGTTTCTGGGTCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMRAALH*FLGLLP
Trigger: AGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCT...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTCCACGTGACAGCACGTaGCACTCAGACGAGGTGTCA +
Preference number: 2 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFPRDST*HSDEVS
Trigger: TGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGG...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFCRMRA*CLVLAL
Trigger: TAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCA...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp CTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGACAGCATGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: LLSVPMTKRLLNSLSKTACRMRA*CLVLAL
Trigger: TAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCA...TGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGCTCTTCTCTGGAAGGTaGCAACTTTCTACGATGTTT +
Preference number: 2 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQLFSGR*QLSTMF
Trigger: AAACATCGTAGAAAGTTGCCACCTTCCAGAGAAGAG...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCCTAGGCTCTGCCTTTaGGCCCTACCCACCGACTGT +
Preference number: 2 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGPRLCL*ALPTDC
Trigger: ACAGTCGGTGGGTAGGGCCCAAAGGCAGAGCCTAGG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCAGAGGCCATCAGTGTaGAAGGGTGCAGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGQRPSV*KGAGLG
Trigger: TCCCAGGCCTGCACCCTTCCACACTGATGGCCTCTG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCACTCAGGACCGGATGTaGGCTATTAGGGAACCAGGC +
Preference number: 2 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGTQDRM*AIREPG
Trigger: GCCTGGTTCCCTAATAGCTCACATCCGGTCCTGAGT...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCG +
Preference number: 2 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGAFWVS*LHPLCA
Trigger: CGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGC...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 2 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGCTCCGGGAGCGTCTCTaGCTTCCTCAGTGTCTGTTG +
Preference number: 2 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMLRERL*LPQCLL
Trigger: CAACAGACACTGAGGAAGGCAGAGACGCTCCCGGAG...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLCRMRA*CLVLAL
Trigger: TAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCA...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGCTCACGGGACCATCCTaGGAGCCTGTGGAGTTCCTT +
Preference number: 2 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLLTGPS*EPVEFL
Trigger: AAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAG...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR TCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTACCACGCCATGGTCTaGCACACTTTGCTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGYHAMV*HTLLAC
Trigger: ACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTA...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGCCTTCATCCACTGTGTaGGCCGACTTGCAGGATGAG +
Preference number: 2 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMPSSTV*ADLQDE
Trigger: CTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGACAGAAAGCTGCTCATaGTCCCAACAAGTGACAGGT +
Preference number: 2 (lower is better)
Translates to: FLKELSSTACHRHKFTSMTESCS*SQQVTG
Trigger: ACCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGT...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
3UTR-3UTR CCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCGGAAGGAAGCAGAGCTaGGAAACGGTGTTAAGGGAC +
Preference number: 2 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGGRKQS*ETVLRD
Trigger: GTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCC...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CAA 90 bp TCATCATCTTCATCAAACCTTCTATCAGTCCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAGACAGCACGAGCCTGTGTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: SSSSSNLLSVPMTKR*LNSLSKTARACVFC
Trigger: GCAGAACACACAGGCTCGTGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGATGAAGATGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTTCCAGACAGAAAGCTaGTCATGCTCCCAACAAGTG +
Preference number: 2 (lower is better)
Translates to: YFLKELSSTACHRHKFTSFQTES*SCSQQV
Trigger: CACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
3UTR-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 2 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGATAAATACCACGCCATaGTCTGACACACTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMINTTP*SDTLCW
Trigger: CCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTGGCTGCCTCTGTCTCTaGATCTGCTGCACAATAAAT +
Preference number: 2 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFGCLCL*ICCTIN
Trigger: ATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCC...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp CTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGACAGCAACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 2 (lower is better)
Translates to: LLSVPMTKRLLNSLSKTATFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...TGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTATAAATACCACGCCATaGTCTGACACACTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFINTTP*SDTLCW
Trigger: CCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR TCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGAAAGCAGAAACCAACTaGAAAGACAGGCTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLKAETN*KDRLPL
Trigger: CAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCTTT...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTTTATTTCAGGATGATTaGTGTAGAGCTAGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFLFQDD*CRARLR
Trigger: ACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAA...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGTTACACAATCCAAAATaGCTAGAGCATCAAAGTCTA +
Preference number: 2 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMLHNPK*LEHQSL
Trigger: TAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAA...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGACTTCATCTCCTGGCTaGTTTATTCTGTCAATTGAC +
Preference number: 2 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLTSSPG*FILSID
Trigger: GTCAATTGACAGAATAAAGCAGCCAGGAGATGAAGT...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAATTTATATTTGGACATaGAACCATACTCAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: SSKLCGLEATTTLLFPERIYIWT*NHTQVP
Trigger: AGGCACTTGAGTATGGTTGCATGTCCAAATATAAAT...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
3UTR GCA 72 bp GGCTGCCAGCCGGCCTTTCTGTGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTCTGTGTGGCCGTCTGC +
Preference number: 3 (lower is better)
Translates to: GCQPAFLWAPQH*TGAVGVCVAVC
Trigger: GCAGACGGCCACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CCA 72 bp GGCGGGGCAGACGGGCTGGTCAGCGACATGATCTCCTaGATGGCCAGCCTCAGCTTCAGCCTGTGCAGGGGG +
Preference number: 3 (lower is better)
Translates to: GGADGLVSDMIS*MASLSFSLCRG
Trigger: CCCCCTGCACAGGCTGAAGCTGAGGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR TCA 72 bp ATGACGCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTaGGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCC +
Preference number: 3 (lower is better)
Translates to: MTPSLSTSRAGL*GILRGVERPLP
Trigger: GGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGCGTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR TCA 72 bp GCCTCAGCTCACCAACTTCCATGGGTGGGCCCTGCTTaGCTCCCCCAGCCTGTCAGCGTGTCGCCTCCCCTC +
Preference number: 3 (lower is better)
Translates to: ASAHQLPWVGPA*LPQPVSVSPPL
Trigger: GAGGGGAGGCGACACGCTGACAGGCTGGGGGAGTCAAGCAGGGCCCACCCATGGAAGTTGGTGAGCTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 72 bp GCCGGCCTTTCTGTGGGCGCCGCAGCACTGCACTGGTaGTGTAGGAGTCTGTGTGGCCGTCTGCCATGGGGA +
Preference number: 3 (lower is better)
Translates to: AGLSVGAAALHW*CRSLCGRLPWG
Trigger: TCCCCATGGCAGACGGCCACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CCA 72 bp GTGCATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTTaGGCCCTACCCACCGACTGTGTATGTGAGCCCCCA +
Preference number: 3 (lower is better)
Translates to: VHARGPRPRLCL*ALPTDCVCEPP
Trigger: TGGGGGCTCACATACACAGTCGGTGGGTAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CCA 72 bp CCAGCCGGCCTTTCTGTGGGCGCCGCAGCACTGCACTaGTGCTGTAGGAGTCTGTGTGGCCGTCTGCCATGG +
Preference number: 3 (lower is better)
Translates to: PAGLSVGAAALH*CCRSLCGRLPW
Trigger: CCATGGCAGACGGCCACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CCA 72 bp AGGCTCATCTCGCAGGGCTGCCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACTGGTGCTGTAGGAGTC +
Preference number: 3 (lower is better)
Translates to: RLISQGCQPAFL*APQHCTGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CCA 72 bp AAGGGTCATGACGCCCAGTCTGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCC +
Preference number: 3 (lower is better)
Translates to: KGHDAQSVHFPS*AVRDPSWGGAP
Trigger: GGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR GCA 72 bp CCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTaGTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTG +
Preference number: 3 (lower is better)
Translates to: PLCAPTCRMRAW*LVLALRGATWV
Trigger: CACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR GCA 72 bp ATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: MSSWLTVCSAPL*SRSNRRALGEE
Trigger: TTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR GCA 72 bp ACATGCGTGCATGCGCGCGGTCCACGGCCTAGGCTCTaGCTTTGGGCCCTACCCACCGACTGTGTATGTGAG +
Preference number: 3 (lower is better)
Translates to: TCVHARGPRPRL*LWALPTDCVCE
Trigger: CTCACATACACAGTCGGTGGGTAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 72 bp TTCAGCCTCAGCTCACCAACTTCCATGGGTGGGCCCTaGTTGACTCCCCCAGCCTGTCAGCGTGTCGCCTCC +
Preference number: 3 (lower is better)
Translates to: FSLSSPTSMGGP*LTPPACQRVAS
Trigger: GGAGGCGACACGCTGACAGGCTGGGGGAGTCAAGCAGGGCCCACCCATGGAAGTTGGTGAGCTGAGGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CAA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACGCCAGACCACAACCGTaGGCCCGTCCCATTGGGCAA +
Preference number: 3 (lower is better)
Translates to: RAWCLVLALRGATWVSLHARPQP*ARPIGQ
Trigger: TTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGC...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR GCA 72 bp GGGCTTTGTGGAGCGAGTCCTGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGACCATCCTGGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: GLCGASPGYCCY*WGCSRDHPGSL
Trigger: CAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
3UTR GCA 72 bp AAGAGTTTGTACCTTGGAAGGCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGGGCGCCGCAGCACTGC +
Preference number: 3 (lower is better)
Translates to: KSLYLGRLISQG*QPAFLWAPQHC
Trigger: GCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAGCCTTCCAAGGTACAAACTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CCA 72 bp CATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGG +
Preference number: 3 (lower is better)
Translates to: HPLCAPTCRMRA*CLVLALRGATW
Trigger: CCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR CCA 72 bp GAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGG +
Preference number: 3 (lower is better)
Translates to: EPVEFLMSLMSS*LTVCSAPLCSR
Trigger: CCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR GCA 72 bp GAAGCAGAGCTGGGAAACGGTGTTAAGGGACATGCGTaGATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: EAELGNGVKGHA*MRAVHGLGSAF
Trigger: AAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGTCCCTTAACACCGTTTCCCAGCTCTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CCA 72 bp CTTTGTGGAGCGAGTCCTGGCTACTGTTGCTACTGCTaGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: LCGASPGYCCYC*GCSRDHPGSLW
Trigger: CCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR TCA 72 bp CTCGGGACCTCCAGAGCAGCGGGCAGGATGACGCCCTaGACCTGCACTTCATCTCCTGGCTGCTTTATTCTG +
Preference number: 3 (lower is better)
Translates to: LGTSRAAGRMTP*TCTSSPGCFIL
Trigger: CAGAATAAAGCAGCCAGGAGATGAAGTGCAGGTTCAGGGCGTCATCCTGCCCGCTGCTCTGGAGGTCCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR TCA 72 bp TGTAGGAGTCTGTGTGGCCGTCTGCCATGGGGAACCTaGAATCTGGGACACTGCCCAAGTGGGGTCGGCCAT +
Preference number: 3 (lower is better)
Translates to: CRSLCGRLPWGT*NLGHCPSGVGH
Trigger: ATGGCCGACCCCACTTGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAGACGGCCACACAGACTCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR GCA 72 bp TTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGCCGGTCTAACCGAAGG +
Preference number: 3 (lower is better)
Translates to: FLMSLMSSWLTV*SAPLCSRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR CAA 90 bp GGAAGTTTGCAGGGAGAGTCTCTGCTGACCCAGCAGCTAAGCCACGAATGTCCTATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGA +
Preference number: 3 (lower is better)
Translates to: GSLQGESLLTQQLSHECPMRAWC*VLALRG
Trigger: TCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT...AGGACATTCGTGGCTTAGCTGCTGGGTCAGCAGAGACTCTCCCTGCAAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CAA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 3 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHCPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CAA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTGCCAAGACACTAGCTaGCTGGGCACGTTCCCAATC +
Preference number: 3 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVCQDTS*LGTFPI
Trigger: GATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR GCA 72 bp AACGTCCCAGGACACACTGACCCACGTGACAGCACGTaGCACTCAGACGAGGTGTCAGCAACGGAGACAGAA +
Preference number: 3 (lower is better)
Translates to: NVPGHTDPRDST*HSDEVSATETE
Trigger: TTCTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 72 bp CACTGCACTGGTGCTGTAGGAGTCTGTGTGGCCGTCTaGCATGGGGAACCTGAAATCTGGGACACTGCCCAA +
Preference number: 3 (lower is better)
Translates to: HCTGAVGVCVAV*HGEPEIWDTAQ
Trigger: TTGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAGACGGCCACACAGACTCCTACAGCACCAGTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR TCA 72 bp TTTAACAATTTAACACCAGGCACCTGTCTCCTGCAGTaGTGCAGGCTCGGGACCTCCAGAGCAGCGGGCAGG +
Preference number: 3 (lower is better)
Translates to: FNNLTPGTCLLQ*CRLGTSRAAGR
Trigger: CCTGCCCGCTGCTCTGGAGGTCCCGAGCCTGCATCACTGCAGGAGACAGGTGCCTGGTGTTAAATTGTTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CAA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 3 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLCPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CAA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTGTCTGTTGCAGCTTTaGCTCTGCCAATTCCAAGCG +
Preference number: 3 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVCLLQL*LCQFQA
Trigger: CGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGACA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CAA 90 bp CTGGCATCCCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTTTAAGAGTTTGTACCTaGGAAGGCTCATCTCGCAGG +
Preference number: 3 (lower is better)
Translates to: LASQPRALARPQPLARPILRVCT*EGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAA...AATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGGGATGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR GCA 72 bp TTATTAGAGCTGCACTGCACTGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCGCCGACTTGCAGGATG +
Preference number: 3 (lower is better)
Translates to: LLELHCTAFWVS*LHPLCAPTCRM
Trigger: CATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR CCA 72 bp ACACAGGTTCGAAACAGGAAAGCACTGAACACCCGATaGCTGCCTGAGAGAAACGTCCCAGGACACACTGAC +
Preference number: 3 (lower is better)
Translates to: TQVRNRKALNTR*LPERNVPGHTD
Trigger: GTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCGGGTGTTCAGTGCTTTCCTGTTTCGAACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CCA 72 bp CTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAG +
Preference number: 3 (lower is better)
Translates to: LSGRKAGRFHTL*LSCHLVPLLWK
Trigger: CTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
3UTR-3UTR CAA 90 bp CTGGCATCCCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAG +
Preference number: 3 (lower is better)
Translates to: LASQPRALARPQPLARPIPMTKR*LNSLSK
Trigger: CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGG...AATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGGGATGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CAA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGTGCCCGCTGCAGTTCTaGATTCTTCTCCTCCAACTG +
Preference number: 3 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQCPLQF*ILLLQL
Trigger: CAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGCA...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CAA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAATGCTTCTTTGCCAGTTaGTCCAGGTCGGCCCTTTTC +
Preference number: 3 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQCFFAS*SRSALF
Trigger: GAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR TCA 72 bp AAGATCAGCAAACACAGGTTCGAAACAGGAAAGCACTaGACACCCGATGGCTGCCTGAGAGAAACGTCCCAG +
Preference number: 3 (lower is better)
Translates to: KISKHRFETGKH*TPDGCLRETSQ
Trigger: CTGGGACGTTTCTCTCAGGCAGCCATCGGGTGTTCAGTGCTTTCCTGTTTCGAACCTGTGTTTGCTGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 72 bp CCGTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGC +
Preference number: 3 (lower is better)
Translates to: PSRKHQLVLMLL*QFVQVGPFLSC
Trigger: GCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
3UTR GCA 72 bp CACGTCAGCATCACTCTCGAATGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTGGGCACGTTCCCAATC +
Preference number: 3 (lower is better)
Translates to: HVSITLECLCYI*QDTSLLGTFPI
Trigger: GATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCTGACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR TCA 72 bp GCTCTGCCTTTGGGCCCTACCCACCGACTGTGTATGTaGGCCCCCACATTTGCATTTAACAATTTAACACCA +
Preference number: 3 (lower is better)
Translates to: ALPLGPTHRLCM*APTFAFNNLTP
Trigger: TGGTGTTAAATTGTTAAATGCAAATGTGGGGGCTCACATACACAGTCGGTGGGTAGGGCCCAAAGGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR GCA 72 bp CCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTaGTGCACAATAAATACCACGCCATGGTCTGACACA +
Preference number: 3 (lower is better)
Translates to: PTEKTGCLCLWI*CTINTTPWSDT
Trigger: TGTGTCAGACCATGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR GCA 72 bp GCCAAGACACTAGCTTGCTGGGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACCTTGGAAGGCTCATCT +
Preference number: 3 (lower is better)
Translates to: AKTLACWARSQS*SLRVCTLEGSS
Trigger: AGATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAGGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CAA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: VSETPACPNASLPVCPGRLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR CCA 72 bp CAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTaGATCTGCTGCACAATAAATACCACGCCATGGTCT +
Preference number: 3 (lower is better)
Translates to: QKPTEKTGCLCL*ICCTINTTPWS
Trigger: AGACCATGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CAA 90 bp CTTCCAAAACAGTTAGAGCTTATTCTCAGTATTCTTCATTGGCAGTGGAAAATGATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGA +
Preference number: 3 (lower is better)
Translates to: LPKQLELILSILHWQWKMMRAWC*VLALRG
Trigger: TCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT...CATTTTCCACTGCCAATGAAGAATACTGAGAATAAGCTCTAACTGTTTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CAA 90 bp CTTCCAAAACAGTTAGAGCTTATTCTCAGTATTCTTCATTGGCAGTGGAAAATGACTGTGTGCGCCGACTaGCAGGATGAGAGCGTGGTG +
Preference number: 3 (lower is better)
Translates to: LPKQLELILSILHWQWKMTVCAD*QDESVV
Trigger: CACCACGCTCTCATCCTGCAAGTCGGCGCACACAGT...CATTTTCCACTGCCAATGAAGAATACTGAGAATAAGCTCTAACTGTTTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR-3UTR CAA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGAGCCTGTGCAGGGGGTaGCTGATGCCAATCTCACGC +
Preference number: 3 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLSLCRG*LMPISR
Trigger: GCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCT...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR GCA 72 bp CTAGCACGGCCTGTCACAGACACAAATTTACAAGTATaGCTCAGTCTCTCTCTGAGAACACAGACGAATACT +
Preference number: 3 (lower is better)
Translates to: LARPVTDTNLQV*LSLSLRTQTNT
Trigger: AGTATTCGTCTGTGTTCTCAGAGAGAGACTGAGGCATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
3UTR CCA 72 bp AGCTTTTGCTCTGCCAATTCCAAGCGCTCCTGTAACTaGCGGTTTTTATCTTCAGTCTGTCGATGCATAGAA +
Preference number: 3 (lower is better)
Translates to: SFCSANSKRSCN*RFLSSVCRCIE
Trigger: TTCTATGCATCGACAGACTGAAGATAAAAACCGCCAGTTACAGGAGCGCTTGGAATTGGCAGAGCAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CAA 90 bp CTTCCAAAACAGTTAGAGCTTATTCTCAGTATTCTTCATTGGCAGTGGAAAATGCGGCCCTTTTCTTTCTaGCCAAACAAGCGGCCAATG +
Preference number: 3 (lower is better)
Translates to: LPKQLELILSILHWQWKMRPFSF*PNKRPM
Trigger: CATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGGCCG...CATTTTCCACTGCCAATGAAGAATACTGAGAATAAGCTCTAACTGTTTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR-3UTR CAA 90 bp CTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGACAGCACGAATCACTCGATCATaGCTCCAAACAAGCACGTCT +
Preference number: 3 (lower is better)
Translates to: LLSVPMTKRLLNSLSKTARITRS*LQTSTS
Trigger: AGACGTGCTTGTTTGGAGCAATGATCGAGTGATTCG...TGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000532504.5
3UTR-3UTR CAA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: LTPAILNLFMLQNKASLALKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CAA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGCACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCT +
Preference number: 3 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMHFMVV*SSRTSS
Trigger: AGAAGAGGTACGAGATGACAAGACAACCATAAAGTG...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR-3UTR CAA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAG +
Preference number: 3 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGPMTKR*LNSLSK
Trigger: CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
3UTR TCA 72 bp TCATTGCTCCAAACAAGCACGTCTTTTATTTCACTCTaGCTTTCTTCTCTTTTTCTTTCCAGTTCTTTCCGG +
Preference number: 3 (lower is better)
Translates to: SLLQTSTSFISL*LSSLFLSSSFR
Trigger: CCGGAAAGAACTGGAAAGAAAAAGAGAAGAAAGTCAGAGTGAAATAAAAGACGTGCTTGTTTGGAGCAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000532504.5
3UTR GCA 72 bp ACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATaGTGCATAATCATCTGTAGAAGTAGTGTGGGTAAA +
Preference number: 3 (lower is better)
Translates to: TGFQNVVFVGFK*CIIICRSSVGK
Trigger: TTTACCCACACTACTTCTACAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGGAGGGGAGGGTCGGCAGTGGCCGCTaGTGCCTGCTCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGCEGSFVGWSAHCPEGRVGSGR*CLLQVG
Trigger: CCCCACCTGGAGCAGGCATCAGCGGCCACTGCCGAC...CCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp GGGACATGCGTGCATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTTGGGCCCTAGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTCVHARGPRPRLCLWALVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...TAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASACPLGDSRSTELRRVSVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLCSRSNRRALGEEGGEVVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...AACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GGGACATGCGTGCATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTTGGGCCCTAACCTGTCTCCTGCAGTaGTGCAGGCTCGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: GTCVHARGPRPRLCLWALTCLLQ*CRLGTS
Trigger: GGAGGTCCCGAGCCTGCATCACTGCAGGAGACAGGT...TAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACT +
Preference number: 4 (lower is better)
Translates to: ASVCASACPLGDSRSTELQPAFL*APQHCT
Trigger: AGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG...CAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: ASVCASACPLGDSRSTELRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...CAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGGAGGGGAGGCAGGGAAAGGAACACTaGAGTGGAGCCGTGCACTCC +
Preference number: 4 (lower is better)
Translates to: LGCEGSFVGWSAHCPEGRQGKEH*SGAVHS
Trigger: GGAGTGCACGGCTCCACTCCAGTGTTCCTTTCCCTG...CCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR GCA 90 bp CTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLLLGLLTGPSWEPVEFVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...GAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGGCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGGTGTCGCCTCCCCTCTaGCACCCTGGGCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: MASVCASACPLGDSRSTEVSPPL*HPGLLH
Trigger: GTGAAGCAGCCCAGGGTGGCAGAGGGGAGGCGACAC...CTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACCGCTCCGGGAGAGCTTaGGAGCCGACGAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHRSGRA*EPTKAA
Trigger: GGCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCG...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532504.5
CDS-3UTR CCA 90 bp GCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: AAGLTEGLSGRKAGRFHTVRDPS*GGAPTA
Trigger: GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCAC...AGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SVCASACPLGDSRSTELRSLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...CCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGAGCGGGCTCCTGGGCTaGGCAGCGTGCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EFLMSLMSSWLTVCSAPLSGLLG*AACGRR
Trigger: CCTCCTCCCGCACGCTGCCCAGCCCAGGAGCCCGCT...CAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
3UTR CAA 72 bp CTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LMSSWLTVCSAP*CSRSNRRALGE
Trigger: CTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGGCTGGTCAGCGACATaGTCTCCTGGATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AQSVHFPSWAVRDPSWGGGWSAT*SPGWPA
Trigger: GGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCC...TCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTGGGAGCCACCTTTGTaGGCAGGCAGGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CSRSNRRALGEEGGEVSHWEPPL*AGRESR
Trigger: CCTGCTCTCCCTGCCTGCTCACAAAGGTGGCTCCCA...GTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp CACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCGCAGCACTGCACTGGTaGTGTAGGAGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HFPSWAVRDPSWGGAPTAAALHW*CRSLCG
Trigger: GCCACACAGACTCCTACAGCACCAGTGCAGTGCTGC...GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: AAGLTEGLSGRKAGRFHTWAPQH*TGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCA...AGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHLISQG*QPAFLW
Trigger: CCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAG...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCAGGCACCTGTCTCCTaGAGTGATGCAGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: ASACPLGDSRSTELRRVSQAPVS*SDAGSG
Trigger: TCCCGAGCCTGCATCACTGCAGGAGACAGGTGCCTG...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACCCACGGCCTAGGCTCTaGCTTTGGGCCCTACCCACC +
Preference number: 4 (lower is better)
Translates to: RAWCLVLALRGATWVSLHPRPRL*LWALPT
Trigger: GGTGGGTAGGGCCCAAAGGCAGAGCCTAGGCCGTGG...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTGTTAAGGGACATGCGTaGATGCGCGCGGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: PLCSRSNRRALGEEGGEVVKGHA*MRAVHG
Trigger: GCCGTGGACCGCGCGCATGCACGCATGTCCCTTAAC...AACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACGTGTCGCCTCCCCTCTaGCACCCTGGGCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RAWCLVLALRGATWVSLHVSPPL*HPGLLH
Trigger: GTGAAGCAGCCCAGGGTGGCAGAGGGGAGGCGACAC...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACT +
Preference number: 4 (lower is better)
Translates to: LCSRSNRRALGEEGGEVSQPAFL*APQHCT
Trigger: AGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG...TGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTGATGCCTGCTCCAGGTaGGGTGGTGGTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFDACSR*GGGGHG
Trigger: CCCATGGCCACCACCACCCCACCTGGAGCAGGCATC...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp GCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCAGAGCAGCGGGCAGGATaGCGCCCTGAACCTGCACTT +
Preference number: 4 (lower is better)
Translates to: ACPLGDSRSTELRRVSLSEQRAG*RPEPAL
Trigger: AAGTGCAGGTTCAGGGCGTCATCCTGCCCGCTGCTC...TGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTGGGTGGGCCCTGCTTaGCTCCCCCAGCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVWVGPA*LPQPVS
Trigger: GCTGACAGGCTGGGGGAGTCAAGCAGGGCCCACCCA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCACTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ACPLGDSRSTELRRVSLSLISQG*QPAFLW
Trigger: CCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAG...TGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGACTGGAGTGGAGCCGTaGACTCCTGAAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TVCSAPLCSRSNRRALGETGVEP*TPEELQ
Trigger: CTGGAGCTCTTCAGGAGTGCACGGCTCCACTCCAGT...CTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR GCA 90 bp AGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTCCACGGCCTAGGCTCTaGCTTTGGGCCCTACCCACC +
Preference number: 4 (lower is better)
Translates to: SRSNRRALGEEGGEVSHFPRPRL*LWALPT
Trigger: GGTGGGTAGGGCCCAAAGGCAGAGCCTAGGCCGTGG...AAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGGTGGCCGCTGATGCCTaGTCCAGGTGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQVAADA*SRWGGG
Trigger: ACCACCACCCCACCTGGAGCAGGCATCAGCGGCCAC...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCGCTGGACACGCCTGCTaGAGACTGCGCTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ASACPLGDSRSTELRRVSAGHAC*RLRLSL
Trigger: AAGAGACAAGCGCAGTCTCCAGCAGGCGTGTCCAGC...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGGCCGCAGCACTGCACTaGTGCTGTAGGAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CASACPLGDSRSTELRRVAAALH*CCRSLC
Trigger: ACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGC...CACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACT +
Preference number: 4 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEQPAFL*APQHCT
Trigger: AGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACT +
Preference number: 4 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPQPAFL*APQHCT
Trigger: AGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: VEFLMSLMSSWLTVCSAPRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...AGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGCTCACGGGACCATCCTaGGAGCCTGTGGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TVCSAPLCSRSNRRALGELTGPS*EPVEFL
Trigger: AAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAG...CTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGCTCACGGGACCATCCTaGGAGCCTGTGGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CASACPLGDSRSTELRRVLTGPS*EPVEFL
Trigger: AAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAG...CACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGCTCCAGGTGGGGTGGTaGTGGCCATGGGCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQLQVGW*WPWALR
Trigger: TCGCAGAGCCCATGGCCACCACCACCCCACCTGGAG...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AGCAGGTGGGAGTGTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGGATGCCTGCTCCAGGTaGGGTGGTGGTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: SRWECEASTEEGSRAGKRDACSR*GGGGHG
Trigger: CCCATGGCCACCACCACCCCACCTGGAGCAGGCATC...CCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCACACTCCCACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GGGACATGCGTGCATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTTGGGCCCTATCCAGTTCTGTCACATaGCTGGAAAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTCVHARGPRPRLCLWALSSSVT*LEREAR
Trigger: CCTGGCTTCCCTTTCCAGTCATGTGACAGAACTGGA...TAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTTCCCGAGCTGGGCTGTaGGGGATCCTTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGASRAGL*GILRGV
Trigger: CACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGA...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTCCCGAGCTGGGCTGTaGGGGATCCTTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVSRAGL*GILRGV
Trigger: CACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTAGGCTGGTCAGCGACATaGTCTCCTGGATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGLTEGLSGRKAGRFHTLGWSAT*SPGWPA
Trigger: GGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCC...TAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCCGCCGACTTGCAGGATaGGAGCGTGGTGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPRRLAG*ERGAWC
Trigger: GCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCG...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGACGCCGACTTGCAGGATaGGAGCGTGGTGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ATVATAGVAHGTILGACGRRLAG*ERGAWC
Trigger: GCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCG...TCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTGGGTGGGCCCTGCTTaGCTCCCCCAGCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: NRRALGEEGGEVSHFMVVWVGPA*LPQPVS
Trigger: GCTGACAGGCTGGGGGAGTCAAGCAGGGCCCACCCA...GACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACCACCCGATGGCTGCCTaGGAGAAACGTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: RAWCLVLALRGATWVSLHHPMAA*EKRPRT
Trigger: TGTCCTGGGACGTTTCTCTCAGGCAGCCATCGGGTG...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGGCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGGCAGCACTGCACTGGTaGTGTAGGAGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: MASVCASACPLGDSRSTEAALHW*CRSLCG
Trigger: GCCACACAGACTCCTACAGCACCAGTGCAGTGCTGC...CTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPWAPQH*TGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCA...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCGCCAAGACACTAGCTTaGTGGGCACGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: ASACPLGDSRSTELRRVSAKTLA*WARSQS
Trigger: GGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTCTAACTGCTACTGCTGGGGTTaGTCACGGGACCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LMSSWLTVCSAPLCSRSNCYCWG*SRDHPG
Trigger: CCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA...GTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGACTCAGCTTCAGCCTGTaGAGGGGGTTGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: AQSVHFPSWAVRDPSWGGLSFSL*RGLLMP
Trigger: TGGCATCAGCAACCCCCTGCACAGGCTGAAGCTGAG...TCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACAGGATGAGAGCGTGGTaGTTGGTGCTGGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHRMRAW*LVLALR
Trigger: CCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCT...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTGCCGCAGCACTGCACTaGTGCTGTAGGAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLCSRSNRRALGEEGGEVAAALH*CCRSLC
Trigger: ACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGC...AACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLSLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LLLLLGLLTGPSWEPVEFSLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...GAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LGLLTGPSWEPVEFLMSLSLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...CAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGCTCACGGGACCATCCTaGGAGCCTGTGGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: MSLMSSWLTVCSAPLCSRLTGPS*EPVEFL
Trigger: AAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAG...CCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGGGCAGGGAGAGCAGGTaGGAGTGTGAAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQGRESR*ECEAST
Trigger: GGTGCTGGCTTCACACTCCCACCTGCTCTCCCTGCC...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TCCTGGCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGGCAGGGAGAGCAGGTaGGAGTGTGAAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SWLLLLLLGLLTGPSWEPGRESR*ECEAST
Trigger: GGTGCTGGCTTCACACTCCCACCTGCTCTCCCTGCC...AGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACACCAACTTCCATGGGTaGGCCCTGCTTGACTCCCCC +
Preference number: 4 (lower is better)
Translates to: RAWCLVLALRGATWVSLHTNFHG*ALLDSP
Trigger: GGGGGAGTCAAGCAGGGCCCACCCATGGAAGTTGGT...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGCAGGTGGGGTGGTGGTaGCCATGGGCTCTGCGAATC +
Preference number: 4 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTQVGWW*PWALRI
Trigger: GATTCGCAGAGCCCATGGCCACCACCACCCCACCTG...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CAA 72 bp CTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LCAPTCRMRAWC*VLALRGATWVS
Trigger: AGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: CSRSNRRALGEEGGEVSHAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...GTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTTGTGCAGGGGGTTGCTaGTGCCAATCTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFCAGGC*CQSHAG
Trigger: TCCAGCGTGAGATTGGCATCAGCAACCCCCTGCACA...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCCGAGTCTCTCCAGCTaGGAGAACTGCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLGLLTGPSWEPVEFLMSPSLSS*ENCSQL
Trigger: GAGCTGGGAGCAGTTCTCTCAGCTGGAGAGACTCGG...GGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCGCCGACTTGCAGGATaGGAGCGTGGTGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVRRLAG*ERGAWC
Trigger: GCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCG...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACGAGATGGAAGGGTCATaGCGCCCAGTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHEMEGS*RPVCPL
Trigger: AAGTGGACAGACTGGGCGTCATGACCCTTCCATCTC...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530390.5
CDS-3UTR TCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACGGCAGGATGACGCCCTaGACCTGCACTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHGRMTP*TCTSSP
Trigger: AGGAGATGAAGTGCAGGTTCAGGGCGTCATCCTGCC...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTGAGCAGCGGGCAGGATaGCGCCCTGAACCTGCACTT +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGAEQRAG*RPEPAL
Trigger: AAGTGCAGGTTCAGGGCGTCATCCTGCCCGCTGCTC...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGGCTCAATGGCAACACTaGGGTGGGAGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQAQWQH*GGRRGR
Trigger: CCTTCCCCTCCTCCCACCTCAGTGTTGCCATTGAGC...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTCACCCGATGGCTGCCTaGGAGAAACGTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SRSNRRALGEEGGEVSHFHPMAA*EKRPRT
Trigger: TGTCCTGGGACGTTTCTCTCAGGCAGCCATCGGGTG...AAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp AGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGTGTGGCTTCACGCTGTaGAGCGAGGTAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SVCASACPLGDSRSTELRCGFTL*SEVAFF
Trigger: GAAAAACGCTACCTCGCTGCACAGCGTGAAGCCACA...CCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GGGACATGCGTGCATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTTGGGCCCTAGTCTGTTGCAGCTTTTaGTCTGCCAATTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GTCVHARGPRPRLCLWALVCCSF*SANSKR
Trigger: GCGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGAC...TAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGALISQG*QPAFLW
Trigger: CCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAG...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPCSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVSWLTV*SAPLCS
Trigger: GCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGACGAGCCTGTGTGTTCTaGGTCGGGATCTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: AQSVHFPSWAVRDPSWGGRACVF*VGICNS
Trigger: GCTGTTACAGATCCCGACGCAGAACACACAGGCTCG...TCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGACTGTGTGCGCCGACTTaGAGGATGAGAGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ATVATAGVAHGTILGACGLCAPT*RMRAWC
Trigger: GCACCACGCTCTCATCCTGCAAGTCGGCGCACACAG...TCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGCCTTCATCCACTGTGTaGGCCGACTTGCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: MSLMSSWLTVCSAPLCSRPSSTV*ADLQDE
Trigger: CTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG...CCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: AQSVHFPSWAVRDPSWGGAFWVS*LHPLCA
Trigger: CGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGC...TCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGCAGGCACCTGTCTCCTaGAGTGATGCAGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTQAPVS*SDAGSG
Trigger: TCCCGAGCCTGCATCACTGCAGGAGACAGGTGCCTG...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTGGCCGCTGATGCCTaGTCCAGGTGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PKGSRGGRRGGFTLYGCLVAADA*SRWGGG
Trigger: ACCACCACCCCACCTGGAGCAGGCATCAGCGGCCAC...AAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp CGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACT +
Preference number: 4 (lower is better)
Translates to: RRALGEEGGEVSHFMVVLQPAFL*APQHCT
Trigger: AGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG...CAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLVHFPS*AVRDPS
Trigger: CGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGAC...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGTTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: TVCSAPLCSRSNRRALGELWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...CTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TCCTGGCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTCTAAGGGGAGCCACATaGGTGTCTCTCCACCCGCTC +
Preference number: 4 (lower is better)
Translates to: SWLLLLLLGLLTGPSWEPLRGAT*VSLHPL
Trigger: GAGCGGGTGGAGAGACACCCATGTGGCTCCCCTTAG...AGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCAGGGACACTGCCCAAGTaGGGTCGGCTCTTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: ACPLGDSRSTELRRVSLSGTLPK*GRLLVS
Trigger: TGAGACTAAGAGCCGACCCCACTTGGGCAGTGTCCC...TGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526369.3
ENST00000532504.5
CDS-3UTR CCA 90 bp CTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCAGAGGCCATCAGTGTaGAAGGGTGCAGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLGLLTGPSWEPVEFLMSQRPSV*KGAGLG
Trigger: TCCCAGGCCTGCACCCTTCCACACTGATGGCCTCTG...GGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp GCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCAGAGACAATGGTGTCCTaGCCCTGCTCCACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ACPLGDSRSTELRRVSLSETMVS*PCSTLR
Trigger: CCTGAGAGTGGAGCAGGGCCAGGACACCATTGTCTC...TGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACGCCCGCTGCAGTTCTTaGTTCTTCTCCTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHARCSS*FFSSNC
Trigger: ACAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGC...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: RAWCLVLALRGATWVSLHAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHSPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGGTGGGAGTGTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTGCAGGGGGTTGCTaGTGCCAATCTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRWECEASTEEGSRAGKRCAGGC*CQSHAG
Trigger: TCCAGCGTGAGATTGGCATCAGCAACCCCCTGCACA...CCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCACACTCCCACCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGGCTGGTCAGCGACATaGTCTCCTGGATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ILGACGVPYVPDVLVADGGWSAT*SPGWPA
Trigger: GGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCC...ACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp ATTTCCTGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATCCGAGTCTCTCCAGCTaGGAGAACTGCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ISCGRSRCGRGRRAGQRHPSLSS*ENCSQL
Trigger: GAGCTGGGAGCAGTTCTCTCAGCTGGAGAGACTCGG...ATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACAGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTCCGAGTCTCTCCAGCTaGGAGAACTGCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGAPSLSS*ENCSQL
Trigger: GAGCTGGGAGCAGTTCTCTCAGCTGGAGAGACTCGG...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGACTAAGAGACCGCTCATaGCTGGAGACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: AQSVHFPSWAVRDPSWGGLRDRS*LETRHS
Trigger: GGAATGCCTTGTCTCCAGGCATGAGCGGTCTCTTAG...TCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTGTGGCTTCACGCTGTaGAGCGAGGTAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: MSLMSSWLTVCSAPLCSRCGFTL*SEVAFF
Trigger: GAAAAACGCTACCTCGCTGCACAGCGTGAAGCCACA...CCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGGCAGCACTGCACTGGTaGTGTAGGAGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTAALHW*CRSLCG
Trigger: GCCACACAGACTCCTACAGCACCAGTGCAGTGCTGC...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PKGSRGGRRGGFTLYGCLIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...AAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCTACTGCTGGGGTTaGTCACGGGACCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SWEPVEFLMSLMSSWLTVCYCWG*SRDHPG
Trigger: CCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA...CACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTGCTACTGCTGGGGTTaGTCACGGGACCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVCYCWG*SRDHPG
Trigger: CCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: LLGLLTGPSWEPVEFLMSGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...GGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: ACGVPYVPDVLVADGVQRGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...GCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCCCGCTTTTCACGTTTaGTCGGCAGGCAGCCACATA +
Preference number: 4 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFPAFHV*SAGSHI
Trigger: TATGTGGCTGCCTGCCGAGCAAACGTGAAAAGCGGG...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACCCGCTTTTCACGTTTaGTCGGCAGGCAGCCACATA +
Preference number: 4 (lower is better)
Translates to: LCSRSNRRALGEEGGEVSPAFHV*SAGSHI
Trigger: TATGTGGCTGCCTGCCGAGCAAACGTGAAAAGCGGG...TGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTCTCAGCTTCAGCCTGTaGAGGGGGTTGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: VEFLMSLMSSWLTVCSAPLSFSL*RGLLMP
Trigger: TGGCATCAGCAACCCCCTGCACAGGCTGAAGCTGAG...AGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCAGGATGAGAGCGTGGTaGTTGGTGCTGGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLRMRAW*LVLALR
Trigger: CCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCT...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHAFWVS*LHPLCA
Trigger: CGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGC...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACAGAGCTGCACTGCACTaGTTTCTGGGTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RAWCLVLALRGATWVSLHRAALH*FLGLLP
Trigger: AGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCT...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCTTATTAGAGCTGCACTaGACTGCTTTCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HFPSWAVRDPSWGGAPTALLELH*TAFWVS
Trigger: GGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAA...GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGAGACTTGGAAAGCGCTaGCACCCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGACGVPYVPDVLVADGVRLGKR*HPLGQL
Trigger: GAGCTGGCCCAGAGGGTGGCAGCGCTTTCCAAGTCT...CACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGCGTTTGCGGCGTGGCTaGGAGCGTTTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LGLLTGPSWEPVEFLMSLRLRRG*ERFHLF
Trigger: GAAGAGATGGAAACGCTCGCAGCCACGCCGCAAACG...CAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTCCTCATCTTCCGTTTaGGGCGTGGCTGCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPSSSSV*GVAASV
Trigger: AACGCTCGCAGCCACGCCGCAAACGGAAGATGAGGA...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGATCTCCCACGTGACAGCACGTaGCACTCAGACGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: CGRSRCGRGRRAGQRHDLPRDST*HSDEVS
Trigger: TGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGG...GAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTCTAACAGCGACATGATCTCCTaGATGGCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LMSSWLTVCSAPLCSRSNSDMIS*MASLSF
Trigger: GAAGCTGAGGCTGGCCATCCAGGAGATCATGTCGCT...GTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCTCTTTCTTGGTCAAGTaGTCCAGCATCCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: ASACPLGDSRSTELRRVSSFLVK*SSILAS
Trigger: AGACGCCAGGATGCTGGACCACTTGACCAAGAAAGA...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGGCATCCCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LASQPRALARPQPLARPICRMRA*CLVLAL
Trigger: TAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCA...AATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGGGATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTCAGAGGCCATCAGTGTaGAAGGGTGCAGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGAQRPSV*KGAGLG
Trigger: TCCCAGGCCTGCACCCTTCCACACTGATGGCCTCTG...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCAAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: LCSRSNRRALGEEGGEVSSPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...TGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 4 (lower is better)
Translates to: GLSGRKAGRFHTLWLSCHRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...ATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCCGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 4 (lower is better)
Translates to: KGSRGGRRGGFTLYGCLVRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTGCAGTGCCAGTGCACTaGAGTCGAAGGTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: AAGLTEGLSGRKAGRFHTAVPVH*SRRFHL
Trigger: TAGATGAAACCTTCGACTTCAGTGCACTGGCACTGC...AGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCACTCAGGACCGGATGTaGGCTATTAGGGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLTQDRM*AIREPG
Trigger: GCCTGGTTCCCTAATAGCTCACATCCGGTCCTGAGT...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTGCAGCTTTTGCTCTaGCAATTCCAAGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AAGLTEGLSGRKAGRFHTLQLLL*QFQALL
Trigger: CAGGAGCGCTTGGAATTGGCAGAGCAAAAGCTGCAA...AGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGGCCAAGACACTAGCTTaGTGGGCACGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQAKTLA*WARSQS
Trigger: GGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: LTEGLSGRKAGRFHTLWLCSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...CAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TCTCTGGAAGGTGGCAAAAGGGTCATGACGCCCAGTCTGTCCACTTCCCGAGCTTGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: SLEGGKRVMTPSLSTSRACSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...AGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTTTTGCCACCTTCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR GCA 90 bp CTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTCACCATCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LGDSRSTELRRVSLSSSPSWLTV*SAPLCS
Trigger: GCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGA...TGGTGAAGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTGCTACTGCTGGGGTTaGTCACGGGACCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: NRRALGEEGGEVSHFMVVCYCWG*SRDHPG
Trigger: CCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA...GACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: LGACGVPYVPDVLVADGVGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...CACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTAAGGATGAGAGCGTGGTaGTTGGTGCTGGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: CYCWGCSRDHPGSLWSSLRMRAW*LVLALR
Trigger: CCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCT...TAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTCCTTCATCCACTGTGTaGGCCGACTTGCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: SRSNRRALGEEGGEVSHFPSSTV*ADLQDE
Trigger: CTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG...AAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLAFWVS*LHPLCA
Trigger: CGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGC...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTAGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: AGLTEGLSGRKAGRFHTLAFWVS*LHPLCA
Trigger: CGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGC...TAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TCCTGGCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTAGAGCTGCACTGCACTaGTTTCTGGGTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SWLLLLLLGLLTGPSWEPRAALH*FLGLLP
Trigger: AGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCT...AGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCACGAGCCTGTGTGTTCTGCGTCGGGATCTGTAACAGCAGTGCCAGTGCACTGCGTTTGCGGCGTGGCTaGGAGCGTTTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: ARACVFCVGICNSSASALRLRRG*ERFHLF
Trigger: GAAGAGATGGAAACGCTCGCAGCCACGCCGCAAACG...CAGTGCACTGGCACTGCTGTTACAGATCCCGACGCAGAACACACAGGCTCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCTGCTGCGAACTCCTGTaGAAGTGCCGTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLCCELL*KCRVEL
Trigger: CAGCTCAACACGGCACTTCCACAGGAGTTCGCAGCA...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
CDS-3UTR CCA 90 bp GTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTGCTGCGAACTCCTGTaGAAGTGCCGTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VEFLMSLMSSWLTVCSAPCCELL*KCRVEL
Trigger: CAGCTCAACACGGCACTTCCACAGGAGTTCGCAGCA...AGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532504.5
CDS-3UTR CCA 90 bp CTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGGCTGGACACGCCTGCTaGAGACTGCGCTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGACGVPYVPDVLVADGVAGHAC*RLRLSL
Trigger: AAGAGACAAGCGCAGTCTCCAGCAGGCGTGTCCAGC...CACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SRGGRRGGFTLYGCLVISVRDPS*GGAPTA
Trigger: GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCAC...CGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: PKGSRGGRRGGFTLYGCLVHFPS*AVRDPS
Trigger: CGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGAC...AAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTTCCGTTTGCGGCGTaGCTGCGAGCGTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVLPFAA*LRAFPS
Trigger: AGATGGAAACGCTCGCAGCCACGCCGCAAACGGAAG...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGCCTAGGCTCTGCCTTTaGGCCCTACCCACCGACTGT +
Preference number: 4 (lower is better)
Translates to: LTEGLSGRKAGRFHTLWLPRLCL*ALPTDC
Trigger: ACAGTCGGTGGGTAGGGCCCAAAGGCAGAGCCTAGG...CAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCTCCAGTTCTGTCACATaGCTGGAAAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGLLTGPSWEPVEFLMSSSSVT*LEREAR
Trigger: CCTGGCTTCCCTTTCCAGTCATGTGACAGAACTGGA...GGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGTCCAGTTCTGTCACATaGCTGGAAAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQSSSVT*LEREAR
Trigger: CCTGGCTTCCCTTTCCAGTCATGTGACAGAACTGGA...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGGCCCGCTGCAGTTCTTaGTTCTTCTCCTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEARCSS*FFSSNC
Trigger: ACAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGC...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGACACAGTCTCAGCCACTaGAGACAAGCTCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: ATVATAGVAHGTILGACGHSLSH*RQAPQI
Trigger: GATTTGGGGAGCTTGTCTTCAGTGGCTGAGACTGTG...TCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACAAAGCAGAAACCAACTaGAAAGACAGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CSRSNRRALGEEGGEVSHKAETN*KDRLPL
Trigger: CAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCTTT...GTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTCTAAGAGACCGCTCATaGCTGGAGACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: VEFLMSLMSSWLTVCSAPLRDRS*LETRHS
Trigger: GGAATGCCTTGTCTCCAGGCATGAGCGGTCTCTTAG...AGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTCTAACTTGCAGCTTTTGCTCTaGCAATTCCAAGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LMSSWLTVCSAPLCSRSNLQLLL*QFQALL
Trigger: CAGGAGCGCTTGGAATTGGCAGAGCAAAAGCTGCAA...GTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGTTCCTCAGTGTCTGTTaGAGCTTTTGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SVCASACPLGDSRSTELRFLSVC*SFCSAN
Trigger: ATTGGCAGAGCAAAAGCTGCAACAGACACTGAGGAA...CCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTTCCTCAGTGTCTGTTaGAGCTTTTGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: CASACPLGDSRSTELRRVFLSVC*SFCSAN
Trigger: ATTGGCAGAGCAAAAGCTGCAACAGACACTGAGGAA...CACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCCTCCGGGAGCGTCTCTaGCTTCCTCAGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: NRRALGEEGGEVSHFMVVLRERL*LPQCLL
Trigger: CAACAGACACTGAGGAAGGCAGAGACGCTCCCGGAG...GACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCTGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ASACPLGDSRSTELRRVSCLCYI*QDTSLL
Trigger: CAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCA...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTGTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLDFHCQLDFQSPLPAALSWLTV*SAPLCS
Trigger: GCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGA...CAGAGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTCACCATGCTACTGCTGGGGTTaGTCACGGGACCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGDSRSTELRRVSLSSSPCYCWG*SRDHPG
Trigger: CCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA...TGGTGAAGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCACGAGCCTGTGTGTTCTGCGTCGGGATCTGTAACAGCAGTGCCAGTGCACTGCCCGCTTTTCACGTTTaGTCGGCAGGCAGCCACATA +
Preference number: 4 (lower is better)
Translates to: ARACVFCVGICNSSASALPAFHV*SAGSHI
Trigger: TATGTGGCTGCCTGCCGAGCAAACGTGAAAAGCGGG...CAGTGCACTGGCACTGCTGTTACAGATCCCGACGCAGAACACACAGGCTCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCTGCATCTTCTTTGGCTaGATAGAGGGGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: ASACPLGDSRSTELRRVSCIFFG*IEGEDI
Trigger: TATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCA...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGATTATTAGAGCTGCACTaGACTGCTTTCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AQSVHFPSWAVRDPSWGGLLELH*TAFWVS
Trigger: GGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAA...TCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGTGTCTCTGGATCTGCTaGACAATAAATACCACGCCA +
Preference number: 4 (lower is better)
Translates to: ASVCASACPLGDSRSTELCLWIC*TINTTP
Trigger: TGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACA...CAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: RLSRLPLPTRLSISSARCRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRVRDPS*GGAPTA
Trigger: GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCAC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: GLSGRKAGRFHTLWLSCHVHFPS*AVRDPS
Trigger: CGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGAC...ATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGATTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: ATVATAGVAHGTILGACGLWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...TCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCTTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: ACGVPYVPDVLVADGVQRLWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...GCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCCCAGACCACAACCGTTaGCCCGTCCCATTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: NRRALGEEGGEVSHFMVVPDHNR*PVPLGK
Trigger: TTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGG...GACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGAGCGACATGATCTCCTaGATGGCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: EFLMSLMSSWLTVCSAPLSDMIS*MASLSF
Trigger: GAAGCTGAGGCTGGCCATCCAGGAGATCATGTCGCT...CAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTAGCGACATGATCTCCTaGATGGCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGASDMIS*MASLSF
Trigger: GAAGCTGAGGCTGGCCATCCAGGAGATCATGTCGCT...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: PKGSRGGRRGGFTLYGCLCRMRA*CLVLAL
Trigger: TAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCA...AAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACTGCACTGCTTTCTaGGTCTCCTGCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLHCTAF*VSCLHP
Trigger: TGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTG...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TCCTGGCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTCACTGCACTGCTTTCTaGGTCTCCTGCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: SWLLLLLLGLLTGPSWEPHCTAF*VSCLHP
Trigger: TGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTG...AGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCATAAATACCACGCCATaGTCTGACACACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASACPLGDSRSTELRRVSINTTP*SDTLCW
Trigger: CCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGCTCGTACCTCTTCTCTaGAAGGTGGCAACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: MSLMSSWLTVCSAPLCSRLVPLL*KVATFY
Trigger: GTAGAAAGTTGCCACCTTCCAGAGAAGAGGTACGAG...CCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAAAAGGAACACTGGAGTaGAGCCGTGCACTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ATVATAGVAHGTILGACGKGTLE*SRALLK
Trigger: CTTCAGGAGTGCACGGCTCCACTCCAGTGTTCCTTT...TCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR CCA 90 bp AGCAGGTGGGAGTGTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGGGAAGGAAGCAGAGCTaGGAAACGGTGTTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SRWECEASTEEGSRAGKRGRKQS*ETVLRD
Trigger: GTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCC...CCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCACACTCCCACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TCCTGGCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGGAAGGAAGCAGAGCTaGGAAACGGTGTTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SWLLLLLLGLLTGPSWEPGRKQS*ETVLRD
Trigger: GTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCC...AGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGCAGGTGGGGTGGTGGTaGCCATGGGCTCTGCGAATC +
Preference number: 4 (lower is better)
Translates to: SRGGRRGGFTLYGCLVISQVGWW*PWALRI
Trigger: GATTCGCAGAGCCCATGGCCACCACCACCCCACCTG...CGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTGTTTTCCTTCCTGTaGAAGTGCCGTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSRSNRRALGEEGGEVSHLFSFL*KCRVEL
Trigger: CAGCTCAACACGGCACTTCCACAGGAAGGAAAACAA...GTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp ACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGTTGGCTCTGTTCCCTTaGCTGCTTACTTATGATTTC +
Preference number: 4 (lower is better)
Translates to: TVCSAPLCSRSNRRALGELALFP*LLTYDF
Trigger: GAAATCATAAGTAAGCAGTCAAGGGAACAGAGCCAA...CTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTGCCCGCTGCAGTTCTTaGTTCTTCTCCTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGAARCSS*FFSSNC
Trigger: ACAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGC...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCCTGCCATGGGGAACCTaGAATCTGGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: KGSRGGRRGGFTLYGCLVLPWGT*NLGHCP
Trigger: TGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAG...GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTGGGCAAAAAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: PTQSSSQTTTVGPSHWAKSPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...TTTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTCGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGCACAGTCTCAGCCACTaGAGACAAGCTCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: SWEPVEFLMSLMSSWLTVHSLSH*RQAPQI
Trigger: GATTTGGGGAGCTTGTCTTCAGTGGCTGAGACTGTG...CACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GCACGAGCCTGTGTGTTCTGCGTCGGGATCTGTAACAGCAGTGCCAGTGCACTGTACCACGCCATGGTCTaGCACACTTTGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ARACVFCVGICNSSASALYHAMV*HTLLAC
Trigger: ACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTA...CAGTGCACTGGCACTGCTGTTACAGATCCCGACGCAGAACACACAGGCTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTACCACGCCATGGTCTaGCACACTTTGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CPLGDSRSTELRRVSLSSYHAMV*HTLLAC
Trigger: ACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTA...AGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTACCACGCCATGGTCTaGCACACTTTGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVYHAMV*HTLLAC
Trigger: ACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGCACCGACTGTGTATGTaGGCCCCCACATTTGCATTT +
Preference number: 4 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTHRLCM*APTFAF
Trigger: AAATGCAAATGTGGGGGCTCACATACACAGTCGGTG...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGAAACGGAGACCAAGGTaGCGTCGGCAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQKRRPR*RRQWPL
Trigger: CAGCGGCCACTGCCGACGTCACCTTGGTCTCCGTTT...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp CGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGGAAACAGGAAAGCACTaGACACCCGATGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RRALGEEGGEVSHFMVVLETGKH*TPDGCL
Trigger: CAGGCAGCCATCGGGTGTTCAGTGCTTTCCTGTTTC...CAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp GGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATGCAGCACTGCACTGGTaGTGTAGGAGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLSGRKAGRFHTLWLSCHAALHW*CRSLCG
Trigger: GCCACACAGACTCCTACAGCACCAGTGCAGTGCTGC...ATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGGCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGTGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: MASVCASACPLGDSRSTECLCYI*QDTSLL
Trigger: CAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCA...CTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVCASACPLGDSRSTELRISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...CCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGAGTCCTGGCTACTGTTaGTACTGCTGGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVSPGYC*YCWGCS
Trigger: TGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACT...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTGGGCAAAAAGTCCTGGCTACTGTTaGTACTGCTGGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PTQSSSQTTTVGPSHWAKSPGYC*YCWGCS
Trigger: TGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACT...TTTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTCTCTGTCTCTGGATCTaGTGCACAATAAATACCACG +
Preference number: 4 (lower is better)
Translates to: PLCSRSNRRALGEEGGEVLCLWI*CTINTT
Trigger: CGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAG...AACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGACTGAAAAGACAGGCTaGCTCTGTCTCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LGLLTGPSWEPVEFLMSLTEKTG*LCLWIC
Trigger: GCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGT...CAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGGTGGGAGTGTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGACTGAAAAGACAGGCTaGCTCTGTCTCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: SRWECEASTEEGSRAGKRTEKTG*LCLWIC
Trigger: GCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGT...CCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCACACTCCCACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACCTTCCTGAATCAACCTaGAATCTGAGCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHLPEST*NLSTHC
Trigger: ACAGTGAGTGCTCAGATTGCAGGTTGATTCAGGAAG...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR CCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQVRDPS*GGAPTA
Trigger: GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCAC...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTACTGTTGCTACTGCTaGGGTTGCTCACGGGACCAT +
Preference number: 4 (lower is better)
Translates to: EFLMSLMSSWLTVCSAPLYCCYC*GCSRDH
Trigger: ATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTA...CAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCCCAGACCACAACCGTTaGCCCGTCCCATTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: KGSRGGRRGGFTLYGCLVPDHNR*PVPLGK
Trigger: TTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGG...GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCTCTTTCTTGGTCAAGTaGTCCAGCATCCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLSFLVK*SSILAS
Trigger: AGACGCCAGGATGCTGGACCACTTGACCAAGAAAGA...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AGCAGGTGGGAGTGTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTCTTTCTTGGTCAAGTaGTCCAGCATCCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SRWECEASTEEGSRAGKRSFLVK*SSILAS
Trigger: AGACGCCAGGATGCTGGACCACTTGACCAAGAAAGA...CCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCACACTCCCACCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATCACTGCACTGCTTTCTaGGTCTCCTGCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: GVAHGTILGACGVPYVPDHCTAF*VSCLHP
Trigger: TGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTG...ATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCAGCATGGGGTGGAACTaGGAGGGGAGGTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: KGSRGGRRGGFTLYGCLVSMGWN*EGRWMS
Trigger: ACTCATCCACCTCCCCTCCCAGTTCCACCCCATGCT...GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000530390.5
CDS-3UTR CCA 90 bp GAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGAGAATCGCTATAGCATaGGGTGGAACTGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EFLMSLMSSWLTVCSAPLRIAIA*GGTGRG
Trigger: TCCCCTCCCAGTTCCACCCCATGCTATAGCGATTCT...CAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530390.5
CDS-3UTR CCA 90 bp GCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGCTGCACTTCATCTCCTaGCTGCTTTATTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: ASVCASACPLGDSRSTELLHFIS*LLYSVN
Trigger: ATTGACAGAATAAAGCAGCCAGGAGATGAAGTGCAG...CAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTCAAGGCATCCTGAGATaGGTTATCCGTCTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: CPLGDSRSTELRRVSLSSQGILR*VIRLGN
Trigger: GTTTCCGAGACGGATAACTCATCTCAGGATGCCTTG...AGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAACGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAGGCTGGTCAGCGACATaGTCTCCTGGATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQGWSAT*SPGWPA
Trigger: GGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCC...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCCGAGTCTCTCCAGCTaGGAGAACTGCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRKAGRFHTLWLSCHLVPPSLSS*ENCSQL
Trigger: GAGCTGGGAGCAGTTCTCTCAGCTGGAGAGACTCGG...AGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp ATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTTACCACGCCATGGTCTaGCACACTTTGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ILGACGVPYVPDVLVADGYHAMV*HTLLAC
Trigger: ACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTA...ACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGCTCAATGGCAACACTaGGGTGGGAGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRAQWQH*GGRRGR
Trigger: CCTTCCCCTCCTCCCACCTCAGTGTTGCCATTGAGC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAAAACGGAGACCAAGGTaGCGTCGGCAGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQKRRPR*RRQWPL
Trigger: CAGCGGCCACTGCCGACGTCACCTTGGTCTCCGTTT...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTAGGATCTGTAAGTGCTaGAACCTCTTCAGAGATCGA +
Preference number: 4 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFRICKC*NLFRDR
Trigger: TCGATCTCTGAAGAGGTTTCAGCACTTACAGATCCT...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAACGGCTCGCGGGCGGCTaGTCGCTCCGGGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKRLAGG*SLRESL
Trigger: CAAGCTCTCCCGGAGCGAGCAGCCGCCCGCGAGCCG...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253925.12
ENST00000532504.5
CDS-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGCGGCTCGCGGGCGGCTaGTCGCTCCGGGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMRLAGG*SLRESL
Trigger: CAAGCTCTCCCGGAGCGAGCAGCCGCCCGCGAGCCG...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp GATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCCGGCTCGCGGGCGGCTaGTCGCTCCGGGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: DLKRPRLSRLPLPTRLSIRLAGG*SLRESL
Trigger: CAAGCTCTCCCGGAGCGAGCAGCCGCCCGCGAGCCG...GATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532504.5
CDS-3UTR GCA 90 bp GGGACATGCGTGCATGCGCGCGGTCCACGGCCTAGGCTCTGCCTTTGGGCCCTATCACGGACATCTCGTTaGAATTTTGTGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: GTCVHARGPRPRLCLWALSRTSR*NFVFIS
Trigger: AGAAATGAACACAAAATTGCAACGAGATGTCCGTGA...TAGGGCCCAAAGGCAGAGCCTAGGCCGTGGACCGCGCGCATGCACGCATGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAAGCCTTGGAAAGCGCTaGCACCCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQSLGKR*HPLGQL
Trigger: GAGCTGGCCCAGAGGGTGGCAGCGCTTTCCAAGGCT...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
CDS-3UTR GCA 90 bp GGAAGTTTGCAGGGAGAGTCTCTGCTGACCCAGCAGCTAAGCCACGAATGTCCTGTCTGTGTGGCCGTCTaGCATGGGGAACCTGAAATC +
Preference number: 4 (lower is better)
Translates to: GSLQGESLLTQQLSHECPVCVAV*HGEPEI
Trigger: GATTTCAGGTTCCCCATGGCAGACGGCCACACAGAC...AGGACATTCGTGGCTTAGCTGCTGGGTCAGCAGAGACTCTCCCTGCAAACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCGCCAAGACACTAGCTTaGTGGGCACGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: KGSRGGRRGGFTLYGCLVAKTLA*WARSQS
Trigger: GGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC...GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTTGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFCLCYI*QDTSLL
Trigger: CAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCA...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: KRPRLSRLPLPTRLSISSVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...AGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCAACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: ACPLGDSRSTELRRVSLSTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...TGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGCGTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFFASLSRSALFFLAKQASWLTV*SAPLCS
Trigger: GCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGA...CGCTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTTGCTACTGCTGGGGTTaGTCACGGGACCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: DCLDFHCQLDFQSPLPAACYCWG*SRDHPG
Trigger: CCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA...AGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GGAAGTTTGCAGGGAGAGTCTCTGCTGACCCAGCAGCTAAGCCACGAATGTCCTCCCGCTTTTCACGTTTaGTCGGCAGGCAGCCACATA +
Preference number: 4 (lower is better)
Translates to: GSLQGESLLTQQLSHECPPAFHV*SAGSHI
Trigger: TATGTGGCTGCCTGCCGAGCAAACGTGAAAAGCGGG...AGGACATTCGTGGCTTAGCTGCTGGGTCAGCAGAGACTCTCCCTGCAAACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GGAAGTTTGCAGGGAGAGTCTCTGCTGACCCAGCAGCTAAGCCACGAATGTCCTCGAGCCTGTGTGTTCTaGGTCGGGATCTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: GSLQGESLLTQQLSHECPRACVF*VGICNS
Trigger: GCTGTTACAGATCCCGACGCAGAACACACAGGCTCG...AGGACATTCGTGGCTTAGCTGCTGGGTCAGCAGAGACTCTCCCTGCAAACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGATTATTTCAGGATGATTaGTGTAGAGCTAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: AQSVHFPSWAVRDPSWGGLFQDD*CRARLR
Trigger: ACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAA...TCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTGTGTGCGCCGACTTaGAGGATGAGAGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: DCLDFHCQLDFQSPLPAALCAPT*RMRAWC
Trigger: GCACCACGCTCTCATCCTGCAAGTCGGCGCACACAG...AGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATAGAGCTGCACTGCACTaGTTTCTGGGTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHRAALH*FLGLLP
Trigger: AGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCT...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGTGCAGCCGGTGGTCTGACACACTTTaGTGGCTTGTTAATATGCCA +
Preference number: 4 (lower is better)
Translates to: MSLMSSWLTVCSAPLCSRWSDTL*WLVNMP
Trigger: TGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCA...CCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATAGGGGAAGGGACACTTaGTGGTGTCTGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHRGRDT*WCLAFL
Trigger: GAGGAAAGCCAGACACCAGCAAGTGTCCCTTCCCCT...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGCTTCCTTTTGGGCCATaGCTTCACGGACATCTCGTT +
Preference number: 4 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLLPFGP*LHGHLV
Trigger: AACGAGATGTCCGTGAAGCCATGGCCCAAAAGGAAG...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTCTTCCTTTTGGGCCATaGCTTCACGGACATCTCGTT +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGALPFGP*LHGHLV
Trigger: AACGAGATGTCCGTGAAGCCATGGCCCAAAAGGAAG...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTACTGTTGCTACTGCTaGGGTTGCTCACGGGACCAT +
Preference number: 4 (lower is better)
Translates to: RRALGEEGGEVSHFMVVLYCCYC*GCSRDH
Trigger: ATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTA...CAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: LTEGLSGRKAGRFHTLWLLWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...CAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TCCTGGCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTCATCTGCATCTTCTTTaGCTGCATAGAGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SWLLLLLLGLLTGPSWEPHLHLL*LHRGGR
Trigger: TCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATG...AGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCCACTGCACTGCTTTCTaGGTCTCCTGCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: NRRALGEEGGEVSHFMVVHCTAF*VSCLHP
Trigger: TGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTG...GACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGGGCTGCCTCTGTCTCTaGATCTGCTGCACAATAAAT +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQGCLCL*ICCTIN
Trigger: ATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCC...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGGGCTGCCTCTGTCTCTaGATCTGCTGCACAATAAAT +
Preference number: 4 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEGCLCL*ICCTIN
Trigger: ATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCC...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACCTCTTCTCTGGAAGGTaGCAACTTTCTACGATGTTT +
Preference number: 4 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHLFSGR*QLSTMF
Trigger: AAACATCGTAGAAAGTTGCCACCTTCCAGAGAAGAG...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTAAACTGGGAGGGGAGGTaGATGAGTAAACTACTGACT +
Preference number: 4 (lower is better)
Translates to: AGLTEGLSGRKAGRFHTLNWEGR*MSKLLT
Trigger: AGTCAGTAGTTTACTCATCCACCTCCCCTCCCAGTT...TAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530390.5
CDS-3UTR TCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGAAGGCCAGCGTTTCTTaGGTCTCTCTCAGTGTATCA +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVKASVS*VSLSVS
Trigger: TGATACACTGAGAGAGACTCAAGAAACGCTGGCCTT...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTCAAGTTTATCATTaGGGTCATGCACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: CSRSNRRALGEEGGEVSHFQVYH*GHAQMW
Trigger: CCACATCTGTGCATGACCTCAATGATAAACTTGAAA...GTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTGCCATGGGGAACCTaGAATCTGGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: DCLDFHCQLDFQSPLPAALPWGT*NLGHCP
Trigger: TGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAG...AGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GGGGGAATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGTCCCGAGCTGGGCTGTaGGGGATCCTTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GGMELIDLKRPRLSRLPLSRAGL*GILRGV
Trigger: CACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGA...CAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 4 (lower is better)
Translates to: RKAGRFHTLWLSCHLVPLRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...AAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTTGTGCAGGGGGTTGCTaGTGCCAATCTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: LSRLPLPTRLSISSARCSCAGGC*CQSHAG
Trigger: TCCAGCGTGAGATTGGCATCAGCAACCCCCTGCACA...AGAGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GCACGAGCCTGTGTGTTCTGCGTCGGGATCTGTAACAGCAGTGCCAGTGCACTGAAAGCAGAAACCAACTaGAAAGACAGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ARACVFCVGICNSSASALKAETN*KDRLPL
Trigger: CAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCTTT...CAGTGCACTGGCACTGCTGTTACAGATCCCGACGCAGAACACACAGGCTCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTAAAAGCAGAAACCAACTaGAAAGACAGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CYCWGCSRDHPGSLWSSLKAETN*KDRLPL
Trigger: CAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCTTT...TAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCGGCAGGATGACGCCCTaGACCTGCACTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RLSRLPLPTRLSISSARCGRMTP*TCTSSP
Trigger: AGGAGATGAAGTGCAGGTTCAGGGCGTCATCCTGCC...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCTTCCTCAGTGTCTGTTaGAGCTTTTGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLFLSVC*SFCSAN
Trigger: ATTGGCAGAGCAAAAGCTGCAACAGACACTGAGGAA...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTTCCTCAGTGTCTGTTaGAGCTTTTGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPFLSVC*SFCSAN
Trigger: ATTGGCAGAGCAAAAGCTGCAACAGACACTGAGGAA...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTAGCCTTGGAAAGCGCTaGCACCCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RKAGRFHTLWLSCHLVPLSLGKR*HPLGQL
Trigger: GAGCTGGCCCAGAGGGTGGCAGCGCTTTCCAAGGCT...AAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532504.5
CDS-3UTR GCA 90 bp TCCTGGCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACC +
Preference number: 4 (lower is better)
Translates to: SWLLLLLLGLLTGPSWEPARSQS*SLRVCT
Trigger: GGTACAAACTCTTAATGAGCAGGATTGGGAACGTGC...AGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACAGCATCACTCTCGAATaGTTGTGCTACATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RAWCLVLALRGATWVSLHSITLE*LCYICQ
Trigger: TTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCT...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGCGTGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: CFFASLSRSALFFLAKQACSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...CGCTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: LSRLPLPTRLSISSARCSGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...AGAGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATAGTCCTGGCTACTGTTaGTACTGCTGGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHSPGYC*YCWGCS
Trigger: TGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACT...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: VAHGTILGACGVPYVPDVVLMLL*QFVQVG
Trigger: GCCGACCTGGACAAACTGGCAAAGAAGCATTAGGAC...GACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GAGTGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGATCTCACATTGCCGTCCATCTaGATCTTCTTTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: ECRSRCGRGRRAGQRHDLTLPSI*IFFGCI
Trigger: TATGCAGCCAAAGAAGATGCAGATGGACGGCAATGT...GAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532504.5
CDS-3UTR GCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCACATTGCCGTCCATCTaGATCTTCTTTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLTLPSI*IFFGCI
Trigger: TATGCAGCCAAAGAAGATGCAGATGGACGGCAATGT...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACTTATTTCAGGATGATTaGTGTAGAGCTAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: RAWCLVLALRGATWVSLHLFQDD*CRARLR
Trigger: ACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAA...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGGTGGGAGTGTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTCTCTGGATCTGCTaGACAATAAATACCACGCCA +
Preference number: 4 (lower is better)
Translates to: SRWECEASTEEGSRAGKRCLWIC*TINTTP
Trigger: TGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACA...CCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCACACTCCCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGTGTCTCTGGATCTGCTaGACAATAAATACCACGCCA +
Preference number: 4 (lower is better)
Translates to: HTDPRDSTCHSDEVSATECLWIC*TINTTP
Trigger: TGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACA...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAATCTGCCACCCTGGGCTaGTTCACAACTCAGGACCGG +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQSATLG*FTTQDR
Trigger: CCGGTCCTGAGTTGTGAAGCAGCCCAGGGTGGCAGA...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACTTCTTTAGTAAGTGCTaGGAACTCCTGGTAAGGATC +
Preference number: 4 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHFFSKC*ELLVRI
Trigger: GATCCTTACCAGGAGTTCGCAGCACTTACTAAAGAA...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGGCTCTAACAGCAGCCTaGTGTTATTCCTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEALTAA*CYSFLL
Trigger: AAGCAGAAAGGAATAACACCAGGCTGCTGTTAGAGC...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGCTGGACACGCCTGCTaGAGACTGCGCTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRAGHAC*RLRLSL
Trigger: AAGAGACAAGCGCAGTCTCCAGCAGGCGTGTCCAGC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AGCAGTGCCAGTGCACTGAAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGGGTCATGCACAGATGTaGCTTCACGCTGTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SSASALKSKVSSKARSAPGHAQM*LHAVQR
Trigger: TCGCTGCACAGCGTGAAGCCACATCTGTGCATGACC...CGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVPLSLM*SSSALS
Trigger: ACTGAGGGCTGAACTAGACCACATGAGACTAAGAGG...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGCCGCAGCACTGCACTaGTGCTGTAGGAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRAAALH*CCRSLC
Trigger: ACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKVRDPS*GGAPTA
Trigger: GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCAC...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCTGGAAGGTGGCAAAAGGGTCATGACGCCCAGTCTGTCCACTTCCCGAGCTCTCGTACCTCTTCTCTaGAAGGTGGCAAAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SLEGGKRVMTPSLSTSRALVPLL*KVAKGS
Trigger: TGACCCTTTTGCCACCTTCCAGAGAAGAGGTACGAG...AGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTTTTGCCACCTTCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR CCA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGATAAATACCACGCCATaGTCTGACACACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEINTTP*SDTLCW
Trigger: CCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGCTCGTACCTCTTCTCTaGAAGGTGGCAACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLLVPLL*KVATFY
Trigger: GTAGAAAGTTGCCACCTTCCAGAGAAGAGGTACGAG...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTCTCGTACCTCTTCTCTaGAAGGTGGCAACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: CPLGDSRSTELRRVSLSSLVPLL*KVATFY
Trigger: GTAGAAAGTTGCCACCTTCCAGAGAAGAGGTACGAG...AGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTGCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: CPLGDSRSTELRRVSLSSALSLM*SSSALS
Trigger: ACTGAGGGCTGAACTAGACCACATGAGACTAAGAGC...AGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526369.3
ENST00000532504.5
CDS-3UTR CCA 90 bp TGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTAGCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: CYCWGCSRDHPGSLWSSLALSLM*SSSALS
Trigger: ACTGAGGGCTGAACTAGACCACATGAGACTAAGAGC...TAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532504.5
CDS-3UTR CCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCGGGACACTGCCCAAGTaGGGTCGGCTCTTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RLSRLPLPTRLSISSARCGTLPK*GRLLVS
Trigger: TGAGACTAAGAGCCGACCCCACTTGGGCAGTGTCCC...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526369.3
ENST00000532504.5
CDS-3UTR CCA 90 bp TTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCATGGGGACCTGAGGTCTaGATTAAAAATGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: LCSRSNRRALGEEGGEVSWGPEV*IKNESG
Trigger: TCCAGATTCATTTTTAATCCAGACCTCAGGTCCCCA...TGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530390.5
CDS-3UTR CCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTCTTCCGTTTGCGGCGTaGCTGCGAGCGTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRLPFAA*LRAFPS
Trigger: AGATGGAAACGCTCGCAGCCACGCCGCAAACGGAAG...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGTTGGCTCTGTTCCCTTaGCTGCTTACTTATGATTTC +
Preference number: 4 (lower is better)
Translates to: LTHVTARATQTRCQQRRQLALFP*LLTYDF
Trigger: GAAATCATAAGTAAGCAGTCAAGGGAACAGAGCCAA...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGGCATCCCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTCCTCTCATTAGATTCTaGAAGCAGCTTGTCAACAGT +
Preference number: 4 (lower is better)
Translates to: LASQPRALARPQPLARPIPLIRF*KQLVNS
Trigger: ACTGTTGACAAGCTGCTTTCAGAATCTAATGAGAGG...AATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGGGATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: RLSRLPLPTRLSISSARCAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAATCCCGAGCTGGGCTGTaGGGGATCCTTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FTLYGCLVISYLFSGRWQSRAGL*GILRGV
Trigger: CACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGA...TTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGATCCCGAGCTGGGCTGTaGGGGATCCTTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ELIDLKRPRLSRLPLPTRSRAGL*GILRGV
Trigger: CACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGA...TCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTCACCAGCCAGAAGTGCTCCGTaGACACCACTCTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: LGDSRSTELRRVSLSSSPARSAP*TPLSIR
Trigger: TCTTATAGAGAGTGGTGTTCACGGAGCACTTCTGGC...TGGTGAAGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAACGCCGACTTGCAGGATaGGAGCGTGGTGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLERRLAG*ERGAWC
Trigger: GCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCG...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCTCTGTTCCCTTGACTaGTTACTTATGATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFLCSLD*LLMISW
Trigger: CCAAGAAATCATAAGTAAGCAGTCAAGGGAACAGAG...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCGTCTGTTGCAGCTTTTaGTCTGCCAATTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: KGSRGGRRGGFTLYGCLVVCCSF*SANSKR
Trigger: GCGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGAC...GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTCTCCGGGAGCGTCTCTaGCTTCCTCAGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TPACPNASLPVCPGRPFSLRERL*LPQCLL
Trigger: CAACAGACACTGAGGAAGGCAGAGACGCTCCCGGAG...AGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTGCAGCACTGCACTGGTaGTGTAGGAGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TPACPNASLPVCPGRPFSAALHW*CRSLCG
Trigger: GCCACACAGACTCCTACAGCACCAGTGCAGTGCTGC...AGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTGCCAAGACACTAGCTTaGTGGGCACGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: LSRLPLPTRLSISSARCSAKTLA*WARSQS
Trigger: GGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC...AGAGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVCLCYI*QDTSLL
Trigger: CAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGGCATCCCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTAGCATCACTCTCGAATaGTTGTGCTACATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LASQPRALARPQPLARPISITLE*LCYICQ
Trigger: TTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCT...AATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGGGATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKSWLTV*SAPLCS
Trigger: GCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGA...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTCGACCATTTTCAGCTaGCCTCGAAGGTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: NRRALGEEGGEVSHFMVVSTIFS*PRRSFL
Trigger: CAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGA...GACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTGCATCTTCTTTGGCTaGATAGAGGGGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVCIFFG*IEGEDI
Trigger: TATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGACATTGCCGTCCATCTaGATCTTCTTTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: EFLMSLMSSWLTVCSAPLTLPSI*IFFGCI
Trigger: TATGCAGCCAAAGAAGATGCAGATGGACGGCAATGT...CAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGGCTTTCTGGGTCTCCTaGCTTCATCCACTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQAFWVS*LHPLCA
Trigger: CGCACACAGTGGATGAAGGCAGGAGACCCAGAAAGC...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTGCTCTAACAGCAGCCTaGTGTTATTCCTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGAALTAA*CYSFLL
Trigger: AAGCAGAAAGGAATAACACCAGGCTGCTGTTAGAGC...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: EGGEVSHFMVVLSSRTSSVHFPS*AVRDPS
Trigger: CGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGAC...AGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKSLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GAAGATCAGCAAACACAGGTTCGAAACAGGAAAGCACTGAACACCCGATGGCTGTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: EDQQTQVRNRKALNTRWLCRMRA*CLVLAL
Trigger: TAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCA...CAGCCATCGGGTGTTCAGTGCTTTCCTGTTTCGAACCTGTGTTTGCTGATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CAA 72 bp TCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SGRKAGRFHTLW*SCHLVPLLWKV
Trigger: CACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGGTGGGAGTGTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTTTCAAGTTTATCATTaGGGTCATGCACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: SRWECEASTEEGSRAGKRFQVYH*GHAQMW
Trigger: CCACATCTGTGCATGACCTCAATGATAAACTTGAAA...CCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCACACTCCCACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTTTGGGGAATGGAGCTCATTaGTCTAAAACGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: EFLMSLMSSWLTVCSAPLGNGAH*SKTTKI
Trigger: AATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCC...CAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGGGGAATGGAGCTCATTaGTCTAAAACGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: SWEPVEFLMSLMSSWLTVGNGAH*SKTTKI
Trigger: AATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCC...CACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCTGGAAACTGTTTCTGTaGAAACTGTCGACCATTTTC +
Preference number: 4 (lower is better)
Translates to: ACGVPYVPDVLVADGVQRWKLFL*KLSTIF
Trigger: GAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCA...GCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCTTCTTTAAGGCCAATTaGCAGGATCCAGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: VAHGTILGACGVPYVPDVFFKAN*QDPANH
Trigger: GTGATTCGCTGGATCCTGTCAATTGGCCTTAAAGAA...GACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTCACAGTCTCAGCCACTaGAGACAAGCTCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRHSLSH*RQAPQI
Trigger: GATTTGGGGAGCTTGTCTTCAGTGGCTGAGACTGTG...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGGTCGGCAGTGGCCGCTaGTGCCTGCTCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMVGSGR*CLLQVG
Trigger: CCCCACCTGGAGCAGGCATCAGCGGCCACTGCCGAC...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGCTCTGTTCCCTTGACTaGTTACTTATGATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTLCSLD*LLMISW
Trigger: CCAAGAAATCATAAGTAAGCAGTCAAGGGAACAGAG...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGTGTGGCTTCACGCTGTaGAGCGAGGTAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VSETPACPNASLPVCPGRCGFTL*SEVAFF
Trigger: GAAAAACGCTACCTCGCTGCACAGCGTGAAGCCACA...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAGTCTGTGTGGCCGTCTaGCATGGGGAACCTGAAATC +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQVCVAV*HGEPEI
Trigger: GATTTCAGGTTCCCCATGGCAGACGGCCACACAGAC...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAATGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: FTLYGCLVISYLFSGRWQWAPQH*TGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCA...TTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACC +
Preference number: 4 (lower is better)
Translates to: RRALGEEGGEVSHFMVVLARSQS*SLRVCT
Trigger: GGTACAAACTCTTAATGAGCAGGATTGGGAACGTGC...CAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAGCCAAGACACTAGCTTaGTGGGCACGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQAKTLA*WARSQS
Trigger: GGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTAGCATCACTCTCGAATaGTTGTGCTACATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGASITLE*LCYICQ
Trigger: TTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCT...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTGGGCAAAAAGCATCACTCTCGAATaGTTGTGCTACATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PTQSSSQTTTVGPSHWAKSITLE*LCYICQ
Trigger: TTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCT...TTTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTGCCAGTGCACTGAAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: SSASALKSKVSSKARSAPVLMLL*QFVQVG
Trigger: GCCGACCTGGACAAACTGGCAAAGAAGCATTAGGAC...CGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAACGAGCCTGTGTGTTCTaGGTCGGGATCTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQRACVF*VGICNS
Trigger: GCTGTTACAGATCCCGACGCAGAACACACAGGCTCG...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAACTGTGTGCGCCGACTTaGAGGATGAGAGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLELCAPT*RMRAWC
Trigger: GCACCACGCTCTCATCCTGCAAGTCGGCGCACACAG...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTTGTCTCTGGATCTGCTaGACAATAAATACCACGCCA +
Preference number: 4 (lower is better)
Translates to: ILGACGVPYVPDVLVADGCLWIC*TINTTP
Trigger: TGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACA...ACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAGGTCATGCACAGATGTaGCTTCACGCTGTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQGHAQM*LHAVQR
Trigger: TCGCTGCACAGCGTGAAGCCACATCTGTGCATGACC...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACT +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMQPAFL*APQHCT
Trigger: AGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMVRDPS*GGAPTA
Trigger: GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCAC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTCTCTTCTCTGGAAGGTaGCAAAAGGGTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRLFSGR*QKGHDA
Trigger: GGCGTCATGACCCTTTTGCCACCTTCCAGAGAAGAG...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253925.12
CDS-3UTR CCA 90 bp GCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCAAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 4 (lower is better)
Translates to: ACPLGDSRSTELRRVSLSRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...TGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTTACTGTTGCTACTGCTaGGGTTGCTCACGGGACCAT +
Preference number: 4 (lower is better)
Translates to: DCLDFHCQLDFQSPLPAAYCCYC*GCSRDH
Trigger: ATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTA...AGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTACTGTTGCTACTGCTaGGGTTGCTCACGGGACCAT +
Preference number: 4 (lower is better)
Translates to: RLSRLPLPTRLSISSARCYCCYC*GCSRDH
Trigger: ATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTA...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTCCAGACCACAACCGTTaGCCCGTCCCATTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: RRGGFTLYGCLVISYLFSPDHNR*PVPLGK
Trigger: TTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGG...AGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTAGCGACATGATCTCCTaGATGGCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TPACPNASLPVCPGRPFSSDMIS*MASLSF
Trigger: GAAGCTGAGGCTGGCCATCCAGGAGATCATGTCGCT...AGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCTCTGTAGAAGTAGTGTaGGTAAACAACAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: MRAWCLVLALRGATWVSLSVEVV*VNNRRL
Trigger: AAGTCTCCTGTTGTTTACCCACACTACTTCTACAGA...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGATCTCTCTGTAGAAGTAGTGTaGGTAAACAACAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: CGRSRCGRGRRAGQRHDLSVEVV*VNNRRL
Trigger: AAGTCTCCTGTTGTTTACCCACACTACTTCTACAGA...GAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAACTTTCTACGATGTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: GCLVISYLFSGRWQLSTMCRMRA*CLVLAL
Trigger: TAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCA...CATCGTAGAAAGTTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGGGGTGGTGGTGGCCATaGGCTCTGCGAATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMGWWWP*ALRIPG
Trigger: GCCTGGGATTCGCAGAGCCCATGGCCACCACCACCC...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGTGCCAGTGCACTGAAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGAAGGCCAGCGTTTCTTaGGTCTCTCTCAGTGTATCA +
Preference number: 4 (lower is better)
Translates to: SSASALKSKVSSKARSAPKASVS*VSLSVS
Trigger: TGATACACTGAGAGAGACTCAAGAAACGCTGGCCTT...CGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTTTTCAAGTTTATCATTaGGGTCATGCACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGAFQVYH*GHAQMW
Trigger: CCACATCTGTGCATGACCTCAATGATAAACTTGAAA...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTGGGCAAAATTTCAAGTTTATCATTaGGGTCATGCACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: PTQSSSQTTTVGPSHWAKFQVYH*GHAQMW
Trigger: CCACATCTGTGCATGACCTCAATGATAAACTTGAAA...TTTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAGGCTGGTCAGCGACATaGTCTCCTGGATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKGWSAT*SPGWPA
Trigger: GGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCC...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGGGCTGGTCAGCGACATaGTCTCCTGGATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRGWSAT*SPGWPA
Trigger: GGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCC...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp ATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTGGCTGGTCAGCGACATaGTCTCCTGGATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: MELIDLKRPRLSRLPLPTGWSAT*SPGWPA
Trigger: GGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCC...AGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCAACCTCTGTGTTCCTaGTACATTGCCGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: VSETPACPNASLPVCPGRQPLCS*YIAVHL
Trigger: CAGATGGACGGCAATGTATCAGGAACACAGAGGTTG...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCAACCTCTGTGTTCCTaGTACATTGCCGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: DCLDFHCQLDFQSPLPAAQPLCS*YIAVHL
Trigger: CAGATGGACGGCAATGTATCAGGAACACAGAGGTTG...AGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGGGAGCCGTGCACTCCTaGAGAGCTCCAGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GGFTLYGCLVISYLFSGRGAVHS*RAPVFC
Trigger: ACAGAACACTGGAGCTCTTCAGGAGTGCACGGCTCC...CCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR TCA 90 bp GCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATTTTCTTTTTCTTCCTaGATCAACCTGCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: AGLTEGLSGRKAGRFHTLFSFSS*INLQSE
Trigger: CTCAGATTGCAGGTTGATTCAGGAAGAAAAAGAAAA...TAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR TCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAACCTGTCTCCTGCAGTaGTGCAGGCTCGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKTCLLQ*CRLGTS
Trigger: GGAGGTCCCGAGCCTGCATCACTGCAGGAGACAGGT...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGTCTGTTGCAGCTTTTaGTCTGCCAATTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRVCCSF*SANSKR
Trigger: GCGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGAC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GGGGGAATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCTCCGGGAGCGTCTCTaGCTTCCTCAGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GGMELIDLKRPRLSRLPLLRERL*LPQCLL
Trigger: CAACAGACACTGAGGAAGGCAGAGACGCTCCCGGAG...CAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAACTTTCTACGATGGTCTGTGTGGCCGTCTaGCATGGGGAACCTGAAATC +
Preference number: 4 (lower is better)
Translates to: GCLVISYLFSGRWQLSTMVCVAV*HGEPEI
Trigger: GATTTCAGGTTCCCCATGGCAGACGGCCACACAGAC...CATCGTAGAAAGTTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGTGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMWAPQH*TGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCA...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTCACCAGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACC +
Preference number: 4 (lower is better)
Translates to: LGDSRSTELRRVSLSSSPARSQS*SLRVCT
Trigger: GGTACAAACTCTTAATGAGCAGGATTGGGAACGTGC...TGGTGAAGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp ATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: MELIDLKRPRLSRLPLPTIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...AGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMSWLTV*SAPLCS
Trigger: GCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGA...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGCGAGTCCTGGCTACTGTTaGTACTGCTGGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CFFASLSRSALFFLAKQASPGYC*YCWGCS
Trigger: TGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACT...CGCTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRVLMLL*QFVQVG
Trigger: GCCGACCTGGACAAACTGGCAAAGAAGCATTAGGAC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGCTCAGCTTCAGCCTGTaGAGGGGGTTGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: GGFTLYGCLVISYLFSGRLSFSL*RGLLMP
Trigger: TGGCATCAGCAACCCCCTGCACAGGCTGAAGCTGAG...CCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATTGCATCTTCTTTGGCTaGATAGAGGGGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHCIFFG*IEGEDI
Trigger: TATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCA...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCTGGTCTGACACACTTTaGTGGCTTGTTAATATGCCA +
Preference number: 4 (lower is better)
Translates to: VAHGTILGACGVPYVPDVWSDTL*WLVNMP
Trigger: TGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCA...GACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGATCTCAGGTTCCCACAAATATaGAACTTTACAGGTATCTGT +
Preference number: 4 (lower is better)
Translates to: CGRSRCGRGRRAGQRHDLRFPQI*NFTGIC
Trigger: ACAGATACCTGTAAAGTTGCATATTTGTGGGAACCT...GAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAGTTAAGGGACATGCGTaGATGCGCGCGGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKVKGHA*MRAVHG
Trigger: GCCGTGGACCGCGCGCATGCACGCATGTCCCTTAAC...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTCGCTCCGGGAGAGCTTaGGAGCCGACGAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSRSGRA*EPTKAA
Trigger: GGCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCG...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp AGCAGTGCCAGTGCACTGAAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGCCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SSASALKSKVSSKARSAPPLSLM*SSSALS
Trigger: ACTGAGGGCTGAACTAGACCACATGAGACTAAGAGG...CGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTGTGAGGGATCCTTCGTaGGGTGGAGCGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFVRDPS*GGAPTA
Trigger: GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCAC...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRSLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAACCAGACCACAACCGTTaGCCCGTCCCATTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLEPDHNR*PVPLGK
Trigger: TTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGG...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCCATCTGCATCTTCTTTaGCTGCATAGAGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSGRKAGRFHTLWLSCHLHLHLL*LHRGGR
Trigger: TCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATG...GAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AGCAGTGCCAGTGCACTGAAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGCATCTGCATCTTCTTTaGCTGCATAGAGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSASALKSKVSSKARSAPHLHLL*LHRGGR
Trigger: TCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATG...CGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCTCTGACACACTTTGCTaGCTTGTTAATATGCCATTT +
Preference number: 4 (lower is better)
Translates to: LLLLLGLLTGPSWEPVEFSDTLC*LVNMPF
Trigger: AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGA...GAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGCTCTTCTCTGGAAGGTaGCAACTTTCTACGATGTTT +
Preference number: 4 (lower is better)
Translates to: LTEGLSGRKAGRFHTLWLLFSGR*QLSTMF
Trigger: AAACATCGTAGAAAGTTGCCACCTTCCAGAGAAGAG...CAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAGTTTGTACCTTGCCTTaGAAGGCTCATCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQVCTLP*KAHLAG
Trigger: CCCTGCGAGATGAGCCTTCCAAGGCAAGGTACAAAC...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526262.5
CDS-3UTR CCA 90 bp ATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCACTCCAGGTGGGGTGGTaGTGGCCATGGGCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: IDLKRPRLSRLPLPTRLSLQVGW*WPWALR
Trigger: TCGCAGAGCCCATGGCCACCACCACCCCACCTGGAG...TGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp AGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTTCCAGTTCTGTCACATaGCTGGAAAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RKAGRFHTLWLSCHLVPLSSSVT*LEREAR
Trigger: CCTGGCTTCCCTTTCCAGTCATGTGACAGAACTGGA...AAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTTCAAGTTTATCATTaGGGTCATGCACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: NRRALGEEGGEVSHFMVVFQVYH*GHAQMW
Trigger: CCACATCTGTGCATGACCTCAATGATAAACTTGAAA...GACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATCCTCTCATTAGATTCTaGAAGCAGCTTGTCAACAGT +
Preference number: 4 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHPLIRF*KQLVNS
Trigger: ACTGTTGACAAGCTGCTTTCAGAATCTAATGAGAGG...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAATCCCGAGCTGGGCTGTaGGGGATCCTTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQSRAGL*GILRGV
Trigger: CACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGA...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGCGCAAGGCATCCTGAGATaGGTTATCCGTCTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: CFFASLSRSALFFLAKQAQGILR*VIRLGN
Trigger: GTTTCCGAGACGGATAACTCATCTCAGGATGCCTTG...CGCTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GAAGATCAGCAAACACAGGTTCGAAACAGGAAAGCACTGAACACCCGATGGCTGCAAGGCATCCTGAGATaGGTTATCCGTCTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: EDQQTQVRNRKALNTRWLQGILR*VIRLGN
Trigger: GTTTCCGAGACGGATAACTCATCTCAGGATGCCTTG...CAGCCATCGGGTGTTCAGTGCTTTCCTGTTTCGAACCTGTGTTTGCTGATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAGCCAGAAGTGCTCCGTaGACACCACTCTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQARSAP*TPLSIR
Trigger: TCTTATAGAGAGTGGTGTTCACGGAGCACTTCTGGC...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAAGCAGTGCCAGTGCACTaGAGTCGAAGGTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQAVPVH*SRRFHL
Trigger: TAGATGAAACCTTCGACTTCAGTGCACTGGCACTGC...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTAAAGCAGAAACCAACTaGAAAGACAGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRKAETN*KDRLPL
Trigger: CAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCTTT...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATCACATCATCTTGAAATaGAAGACCCAGGCTACAGTA +
Preference number: 4 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHHIILK*KTQATV
Trigger: TACTGTAGCCTGGGTCTTTCATTTCAAGATGATGTG...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp AAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCACAATTTCCATATGGTaGCACTGCCTTCCAAAACAG +
Preference number: 4 (lower is better)
Translates to: KGSRGGRRGGFTLYGCLVTISIW*HCLPKQ
Trigger: CTGTTTTGGAAGGCAGTGTCACCATATGGAAATTGT...GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTTGGGAGCCACCTTTGTaGGCAGGCAGGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFWEPPL*AGRESR
Trigger: CCTGCTCTCCCTGCCTGCTCACAAAGGTGGCTCCCA...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGTCACGGACATCTCGTTaGAATTTTGTGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: GPSWEPVEFLMSLMSSWLSRTSR*NFVFIS
Trigger: AGAAATGAACACAAAATTGCAACGAGATGTCCGTGA...CAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTGTCTGTTGCAGCTTTTaGTCTGCCAATTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: TPACPNASLPVCPGRPFSVCCSF*SANSKR
Trigger: GCGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGAC...AGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSWAPQH*TGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp ATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCATGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: IDLKRPRLSRLPLPTRLSWAPQH*TGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCA...TGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCLISQG*QPAFLW
Trigger: CCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAG...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCTGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSGRKAGRFHTLWLSCHLCLCYI*QDTSLL
Trigger: CAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCA...GAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTCACCAAGCATCACTCTCGAATaGTTGTGCTACATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LGDSRSTELRRVSLSSSPSITLE*LCYICQ
Trigger: TTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCT...TGGTGAAGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAGTGTGCGCGTCGGCCTaGCCGCTGGGCGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERVCASA*PLGDSR
Trigger: CCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACAC...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRCSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGTGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMCSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAAAAGGGTCATGAGTCCTGGCTACTGTTaGTACTGCTGGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: MVVLSSRTSSLEGGKRVMSPGYC*YCWGCS
Trigger: TGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACT...CATGACCCTTTTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR CCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAATCGTGTAACTTCCCCTaGGTTAAGGCCAGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQSCNFP*VKASVS
Trigger: AGAAACGCTGGCCTTAACCCAGGGGAAGTTACACGA...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VSETPACPNASLPVCPGRPLSLM*SSSALS
Trigger: ACTGAGGGCTGAACTAGACCACATGAGACTAAGAGG...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAACAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACT +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQQPAFL*APQHCT
Trigger: AGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKVHFPS*AVRDPS
Trigger: CGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGAC...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTCTCACGGGACCATCCTaGGAGCCTGTGGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: KRPRLSRLPLPTRLSISSLTGPS*EPVEFL
Trigger: AAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAG...AGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCTAAGGGGAGCCACATaGGTGTCTCTCCACCCGCTC +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMLRGAT*VSLHPL
Trigger: GAGCGGGTGGAGAGACACCCATGTGGCTCCCCTTAG...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAACTAAGGGGAGCCACATaGGTGTCTCTCCACCCGCTC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKLRGAT*VSLHPL
Trigger: GAGCGGGTGGAGAGACACCCATGTGGCTCCCCTTAG...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCGGCTGCCTCTGTCTCTaGATCTGCTGCACAATAAAT +
Preference number: 4 (lower is better)
Translates to: RLSRLPLPTRLSISSARCGCLCL*ICCTIN
Trigger: ATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCC...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTACAAAAGGTCAGACTTaGAAAGCGCTGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: TPACPNASLPVCPGRPFSTKGQT*KALPPS
Trigger: AGAGGGTGGCAGCGCTTTCCAAGTCTGACCTTTTGT...AGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GAAGATCAGCAAACACAGGTTCGAAACAGGAAAGCACTGAACACCCGATGGCTGACAAAAGGTCAGACTTaGAAAGCGCTGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: EDQQTQVRNRKALNTRWLTKGQT*KALPPS
Trigger: AGAGGGTGGCAGCGCTTTCCAAGTCTGACCTTTTGT...CAGCCATCGGGTGTTCAGTGCTTTCCTGTTTCGAACCTGTGTTTGCTGATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCGGGTGGTGGTGGCCATaGGCTCTGCGAATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVGWWWP*ALRIPG
Trigger: GCCTGGGATTCGCAGAGCCCATGGCCACCACCACCC...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAACTGCCATGGGGAACCTaGAATCTGGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKLPWGT*NLGHCP
Trigger: TGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAG...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCTGCCATGGGGAACCTaGAATCTGGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: MELIDLKRPRLSRLPLPTLPWGT*NLGHCP
Trigger: TGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAG...AGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTGGGGAATGGAGCTCATTaGTCTAAAACGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: CLDFHCQLDFQSPLPAALGNGAH*SKTTKI
Trigger: AATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCC...CAGAGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCAAGGCATCCTGAGATaGGTTATCCGTCTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: KHQLVLMLLCQFVQVGPFQGILR*VIRLGN
Trigger: GTTTCCGAGACGGATAACTCATCTCAGGATGCCTTG...AAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLESPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGTGTGCAGGGGGTTGCTaGTGCCAATCTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMCAGGC*CQSHAG
Trigger: TCCAGCGTGAGATTGGCATCAGCAACCCCCTGCACA...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGTGTGCAGGGGGTTGCTaGTGCCAATCTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMCAGGC*CQSHAG
Trigger: TCCAGCGTGAGATTGGCATCAGCAACCCCCTGCACA...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGTTCTTTAAGGCCAATTaGCAGGATCCAGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: VSETPACPNASLPVCPGRFFKAN*QDPANH
Trigger: GTGATTCGCTGGATCCTGTCAATTGGCCTTAAAGAA...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGCCAGAAGTGCTCCGTaGACACCACTCTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: RRGGFTLYGCLVISYLFSARSAP*TPLSIR
Trigger: TCTTATAGAGAGTGGTGTTCACGGAGCACTTCTGGC...AGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGAACCATTTGCTGCACTaGGACAATGGTGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GGFTLYGCLVISYLFSGRNHLLH*DNGVLA
Trigger: GGCCAGGACACCATTGTCTCAGTGCAGCAAATGGTT...CCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR GCA 90 bp GAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTTTGCAGCTTTTGCTCTaGCAATTCCAAGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EGGEVSHFMVVLSSRTSSLQLLL*QFQALL
Trigger: CAGGAGCGCTTGGAATTGGCAGAGCAAAAGCTGCAA...AGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAAGCCTTGGAAAGCGCTaGCACCCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQSLGKR*HPLGQL
Trigger: GAGCTGGCCCAGAGGGTGGCAGCGCTTTCCAAGGCT...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp GAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGAGTCTGTGTGGCCGTCTaGCATGGGGAACCTGAAATC +
Preference number: 4 (lower is better)
Translates to: ELIDLKRPRLSRLPLPTRVCVAV*HGEPEI
Trigger: GATTTCAGGTTCCCCATGGCAGACGGCCACACAGAC...TCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGGCAGCACTGCACTGGTaGTGTAGGAGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMAALHW*CRSLCG
Trigger: GCCACACAGACTCCTACAGCACCAGTGCAGTGCTGC...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGGGCGCCGCAGCACTaGACTGGTGCTGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGWAPQH*TGAVGV
Trigger: GACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCA...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SNLLSVPMTKRLLNSLSKIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SRGGRRGGFTLYGCLVISISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...CGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTGCTACTGCTGGGGTTaGTCACGGGACCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSCYCWG*SRDHPG
Trigger: CCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp AGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: RRGGFTLYGCLVISYLFSVLMLL*QFVQVG
Trigger: GCCGACCTGGACAAACTGGCAAAGAAGCATTAGGAC...AGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCCTCAGCTTCAGCCTGTaGAGGGGGTTGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: DLKRPRLSRLPLPTRLSILSFSL*RGLLMP
Trigger: TGGCATCAGCAACCCCCTGCACAGGCTGAAGCTGAG...GATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCACATTGCCGTCCATCTaGATCTTCTTTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: RLSRLPLPTRLSISSARCTLPSI*IFFGCI
Trigger: TATGCAGCCAAAGAAGATGCAGATGGACGGCAATGT...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTCTCTGTCTCTGGATCTaGTGCACAATAAATACCACG +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRLCLWI*CTINTT
Trigger: CGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAG...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTTCTGCCACCCTGGGCTaGTTCACAACTCAGGACCGG +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFSATLG*FTTQDR
Trigger: CCGGTCCTGAGTTGTGAAGCAGCCCAGGGTGGCAGA...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGGAGTTCTTTAGTAAGTaGTGCGAACTCCTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQEFFSK*CELLVR
Trigger: CCTTACCAGGAGTTCGCAGCACTTACTAAAGAACTC...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGCTGGACACGCCTGCTaGAGACTGCGCTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMAGHAC*RLRLSL
Trigger: AAGAGACAAGCGCAGTCTCCAGCAGGCGTGTCCAGC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAGCCGCAGCACTGCACTaGTGCTGTAGGAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKAAALH*CCRSLC
Trigger: ACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGC...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGCGTCGGCCTGCCCGCTaGGCGATAGCAGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLRRPAR*AIAGQL
Trigger: CAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACG...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: IDLKRPRLSRLPLPTRLSVHFPS*AVRDPS
Trigger: CGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGAC...TGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGCTCACGGGACCATCCTaGGAGCCTGTGGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRLTGPS*EPVEFL
Trigger: AAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAG...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAATTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLELWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTTTACACAATCCAAAATaGCTAGAGCATCAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: PSSTVCADLQDESVVLGALHNPK*LEHQSL
Trigger: TAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAA...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGATAAATACCACGCCATaGTCTGACACACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSETPACPNASLPVCPGRINTTP*SDTLCW
Trigger: CCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTCCTAGGCTCTGCCTTTaGGCCCTACCCACCGACTGT +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFPRLCL*ALPTDC
Trigger: ACAGTCGGTGGGTAGGGCCCAAAGGCAGAGCCTAGG...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCACCAACTTCCATGGGTaGGCCCTGCTTGACTCCCCC +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCTNFHG*ALLDSP
Trigger: GGGGGAGTCAAGCAGGGCCCACCCATGGAAGTTGGT...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTCAAACAAGCACGTCATaGTTCCTAATCCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: TPACPNASLPVCPGRPFSQTSTS*FLILRL
Trigger: GAGCCGAAGGATTAGGAACCATGACGTGCTTGTTTG...AGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp AAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTAAGGCCAGCGTTTCTTaGGTCTCTCTCAGTGTATCA +
Preference number: 4 (lower is better)
Translates to: KHQLVLMLLCQFVQVGPFKASVS*VSLSVS
Trigger: TGATACACTGAGAGAGACTCAAGAAACGCTGGCCTT...AAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTTTGGCTCTGTTCCCTTaGCTGCTTACTTATGATTTC +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRLALFP*LLTYDF
Trigger: GAAATCATAAGTAAGCAGTCAAGGGAACAGAGCCAA...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTCCTCTCATTAGATTCTaGAAGCAGCTTGTCAACAGT +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRPLIRF*KQLVNS
Trigger: ACTGTTGACAAGCTGCTTTCAGAATCTAATGAGAGG...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGCCTCTCATTAGATTCTaGAAGCAGCTTGTCAACAGT +
Preference number: 4 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQPLIRF*KQLVNS
Trigger: ACTGTTGACAAGCTGCTTTCAGAATCTAATGAGAGG...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTGGGAATGGAGCTCATTaGTCTAAAACGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: DCLDFHCQLDFQSPLPAAGNGAH*SKTTKI
Trigger: AATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCC...AGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp ATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTGTGGCAAAAGGGTCATaGCGCCCAGTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: MELIDLKRPRLSRLPLPTVAKGS*RPVCPL
Trigger: AAGTGGACAGACTGGGCGTCATGACCCTTTTGCCAC...AGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR TCA 90 bp GGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGCAAGGCATCCTGAGATaGGTTATCCGTCTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GGFTLYGCLVISYLFSGRQGILR*VIRLGN
Trigger: GTTTCCGAGACGGATAACTCATCTCAGGATGCCTTG...CCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGGCAGTGCCAGTGCACTaGAGTCGAAGGTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKAVPVH*SRRFHL
Trigger: TAGATGAAACCTTCGACTTCAGTGCACTGGCACTGC...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACACAGTCTCAGCCACTaGAGACAAGCTCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: ELIDLKRPRLSRLPLPTRHSLSH*RQAPQI
Trigger: GATTTGGGGAGCTTGTCTTCAGTGGCTGAGACTGTG...TCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp GAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCCTCGCACATCATCTTaGAATGAAAGACCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: EGGEVSHFMVVLSSRTSSPRTSS*NERPRL
Trigger: TAGCCTGGGTCTTTCATTTCAAGATGATGTGCGAGG...AGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAAGGCTGAGCATGCTGTaGAGAATCGCTATAGCATGG +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLERLSML*RIAIAW
Trigger: CCATGCTATAGCGATTCTTCACAGCATGCTCAGCCT...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530390.5
CDS-3UTR TCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGGGGAACCAGGCTTCCTaGTTTCCAGAGGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMGNQAS*FPEAIS
Trigger: ACTGATGGCCTCTGGAAATCAGGAAGCCTGGTTCCC...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GGAAGTTTGCAGGGAGAGTCTCTGCTGACCCAGCAGCTAAGCCACGAATGTCCTTCACGGACATCTCGTTaGAATTTTGTGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: GSLQGESLLTQQLSHECPSRTSR*NFVFIS
Trigger: AGAAATGAACACAAAATTGCAACGAGATGTCCGTGA...AGGACATTCGTGGCTTAGCTGCTGGGTCAGCAGAGACTCTCCCTGCAAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTCTCCGGGAGCGTCTCTaGCTTCCTCAGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSLRERL*LPQCLL
Trigger: CAACAGACACTGAGGAAGGCAGAGACGCTCCCGGAG...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGGTCTGTGTGGCCGTCTaGCATGGGGAACCTGAAATC +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMVCVAV*HGEPEI
Trigger: GATTTCAGGTTCCCCATGGCAGACGGCCACACAGAC...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGCCAAGACACTAGCTTaGTGGGCACGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMAKTLA*WARSQS
Trigger: GGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp GATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCGCCAAGACACTAGCTTaGTGGGCACGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: DLKRPRLSRLPLPTRLSIAKTLA*WARSQS
Trigger: GGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC...GATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGATCATGGCTAGTGTGTaGGCGTCGGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMIMASV*ASACPL
Trigger: CAGCGGGCAGGCCGACGCGCACACACTAGCCATGAT...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RLSRLPLPTRLSISSARCISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLASWLTV*SAPLCS
Trigger: GCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGA...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGTCGTGGCTGACGGTGTaGAGCGCCCCTTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLSWLTV*SAPLCS
Trigger: GCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGA...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCCTCAGCTTCAGCCTGTaGAGGGGGTTGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCLSFSL*RGLLMP
Trigger: TGGCATCAGCAACCCCCTGCACAGGCTGAAGCTGAG...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGCGAGCCTGTGTGTTCTaGGTCGGGATCTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRRACVF*VGICNS
Trigger: GCTGTTACAGATCCCGACGCAGAACACACAGGCTCG...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAATGTCTCTGGATCTGCTaGACAATAAATACCACGCCA +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQCLWIC*TINTTP
Trigger: TGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACA...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GGGGGAATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGACTGAAAAGACAGGCTaGCTCTGTCTCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: GGMELIDLKRPRLSRLPLTEKTG*LCLWIC
Trigger: GCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGT...CAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCAGACTTGGAAAGCGCTaGCACCCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGRLGKR*HPLGQL
Trigger: GAGCTGGCCCAGAGGGTGGCAGCGCTTTCCAAGTCT...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAAGGGGAAGGGACACTTaGTGGTGTCTGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKRGRDT*WCLAFL
Trigger: GAGGAAAGCCAGACACCAGCAAGTGTCCCTTCCCCT...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCGCTCCGGGAGAGCTTaGGAGCCGACGAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHRSGRA*EPTKAA
Trigger: GGCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253925.12
ENST00000532504.5
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTGCTGCGAACTCCTGTaGAAGTGCCGTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRCCELL*KCRVEL
Trigger: CAGCTCAACACGGCACTTCCACAGGAGTTCGCAGCA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAACTTCCTTTTGGGCCATaGCTTCACGGACATCTCGTT +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLELPFGP*LHGHLV
Trigger: AACGAGATGTCCGTGAAGCCATGGCCCAAAAGGAAG...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGGGTCATGCACAGATGTaGCTTCACGCTGTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRGHAQM*LHAVQR
Trigger: TCGCTGCACAGCGTGAAGCCACATCTGTGCATGACC...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp ACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTAAGCGCTCCTGTAACTaGCGGTTTTTATCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: TPACPNASLPVCPGRPFSKRSCN*RFLSSV
Trigger: GACTGAAGATAAAAACCGCCAGTTACAGGAGCGCTT...AGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGCCGCAGCACTGCACTaGTGCTGTAGGAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCAAALH*CCRSLC
Trigger: ACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGC...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTGCCGCAGCACTGCACTaGTGCTGTAGGAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSAAALH*CCRSLC
Trigger: ACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGC...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAACTCTTCTCTGGAAGGTaGCAAAAGGGTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: FTLYGCLVISYLFSGRWQLFSGR*QKGHDA
Trigger: GGCGTCATGACCCTTTTGCCACCTTCCAGAGAAGAG...TTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR CCA 90 bp GGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 4 (lower is better)
Translates to: GLSGRKAGRFHTLWLSCHRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...ATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLASLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGTCCCTGATGTCCTCGTaGCTGACGGTGTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLSLMSS*LTVCSA
Trigger: GGCGCTGCACACCGTCAGCCACGAGGACATCAGGGA...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTCCAGACCACAACCGTTaGCCCGTCCCATTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSPDHNR*PVPLGK
Trigger: TTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGG...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGAGCGACATGATCTCCTaGATGGCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMSDMIS*MASLSF
Trigger: GAAGCTGAGGCTGGCCATCCAGGAGATCATGTCGCT...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAATCTTTCTTGGTCAAGTaGTCCAGCATCCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLESFLVK*SSILAS
Trigger: AGACGCCAGGATGCTGGACCACTTGACCAAGAAAGA...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGCTAAGGGGAGCCACATaGGTGTCTCTCCACCCGCTC +
Preference number: 4 (lower is better)
Translates to: SNLLSVPMTKRLLNSLSKLRGAT*VSLHPL
Trigger: GAGCGGGTGGAGAGACACCCATGTGGCTCCCCTTAG...CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGGCACTGAACACCCGATaGCTGCCTGAGAGAAACGTC +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMALNTR*LPERNV
Trigger: GACGTTTCTCTCAGGCAGCCATCGGGTGTTCAGTGC...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTGCACTGAACACCCGATaGCTGCCTGAGAGAAACGTC +
Preference number: 4 (lower is better)
Translates to: MELIDLKRPRLSRLPLPTALNTR*LPERNV
Trigger: GACGTTTCTCTCAGGCAGCCATCGGGTGTTCAGTGC...AGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGTCCAGTTCTGTCACATaGCTGGAAAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMSSSVT*LEREAR
Trigger: CCTGGCTTCCCTTTCCAGTCATGTGACAGAACTGGA...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGGCCCGCTGCAGTTCTTaGTTCTTCTCCTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRARCSS*FFSSNC
Trigger: ACAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGC...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCCTGCCATGGGGAACCTaGAATCTGGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVLPWGT*NLGHCP
Trigger: TGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAG...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTGTGGCAAAAGGGTCATaGCGCCCAGTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSVAKGS*RPVCPL
Trigger: AAGTGGACAGACTGGGCGTCATGACCCTTTTGCCAC...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGACGGACAGGGCCGACATaGTGGCCCCGCTTTTCACGT +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERRTGPT*WPRFSR
Trigger: ACGTGAAAAGCGGGGCCATCATGTCGGCCCTGTCCG...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGTGGAAACTGTTTCTGTaGAAACTGTCGACCATTTTC +
Preference number: 4 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQWKLFL*KLSTIF
Trigger: GAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCA...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCGCCGACTTGCAGGATaGGAGCGTGGTGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHRRLAG*ERGAWC
Trigger: GCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTAATCAACCTGCAATCTaGGCACTCACTGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: RKAGRFHTLWLSCHLVPLNQPAI*ALTVHV
Trigger: AACATGGACAGTGAGTGCTCAGATTGCAGGTTGATT...AAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR TCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTGGGAACCAGGCTTCCTaGTTTCCAGAGGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFGNQAS*FPEAIS
Trigger: ACTGATGGCCTCTGGAAATCAGGAAGCCTGGTTCCC...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGTGTGGCTTCACGCTGTaGAGCGAGGTAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMCGFTL*SEVAFF
Trigger: GAAAAACGCTACCTCGCTGCACAGCGTGAAGCCACA...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCTCCGGGAGCGTCTCTaGCTTCCTCAGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGLRERL*LPQCLL
Trigger: CAACAGACACTGAGGAAGGCAGAGACGCTCCCGGAG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCCTCCGGGAGCGTCTCTaGCTTCCTCAGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVLRERL*LPQCLL
Trigger: CAACAGACACTGAGGAAGGCAGAGACGCTCCCGGAG...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAAAGCCTTGGAAAGCGCTaGCACCCTCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKSLGKR*HPLGQL
Trigger: GAGCTGGCCCAGAGGGTGGCAGCGCTTTCCAAGGCT...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTGTCTGTGTGGCCGTCTaGCATGGGGAACCTGAAATC +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSVCVAV*HGEPEI
Trigger: GATTTCAGGTTCCCCATGGCAGACGGCCACACAGAC...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp ATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAGTCTGTGTGGCCGTCTaGCATGGGGAACCTGAAATC +
Preference number: 4 (lower is better)
Translates to: IDLKRPRLSRLPLPTRLSVCVAV*HGEPEI
Trigger: GATTTCAGGTTCCCCATGGCAGACGGCCACACAGAC...TGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGACTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERLISQG*QPAFLW
Trigger: CCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAG...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAACTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKLISQG*QPAFLW
Trigger: CCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAG...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHLISQG*QPAFLW
Trigger: CCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: RRGGFTLYGCLVISYLFSTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...AGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: RKAGRFHTLWLSCHLVPLTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...AAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CTTCCAAAACAGTTAGAGCTTATTCTCAGTATTCTTCATTGGCAGTGGAAAATGTGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: LPKQLELILSILHWQWKMCSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...CATTTTCCACTGCCAATGAAGAATACTGAGAATAAGCTCTAACTGTTTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: SNLLSVPMTKRLLNSLSKGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTCCCGCTTTTCACGTTTaGTCGGCAGGCAGCCACATA +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSPAFHV*SAGSHI
Trigger: TATGTGGCTGCCTGCCGAGCAAACGTGAAAAGCGGG...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp GGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTCGACCATTTTCAGCTaGCCTCGAAGGTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GGFTLYGCLVISYLFSGRSTIFS*PRRSFL
Trigger: CAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGA...CCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGTCGACCATTTTCAGCTaGCCTCGAAGGTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKSTIFS*PRRSFL
Trigger: CAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGA...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAATTATTTCAGGATGATTaGTGTAGAGCTAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQLFQDD*CRARLR
Trigger: ACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAA...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGCTGTGTGCGCCGACTTaGAGGATGAGAGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMLCAPT*RMRAWC
Trigger: GCACCACGCTCTCATCCTGCAAGTCGGCGCACACAG...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTAGAGCTGCACTGCACTaGTTTCTGGGTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFRAALH*FLGLLP
Trigger: AGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCGTTTGCGGCGTGGCTaGGAGCGTTTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGRLRRG*ERFHLF
Trigger: GAAGAGATGGAAACGCTCGCAGCCACGCCGCAAACG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGTCCTCATCTTCCGTTTaGGGCGTGGCTGCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMSSSSV*GVAASV
Trigger: AACGCTCGCAGCCACGCCGCAAACGGAAGATGAGGA...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTACTTCATCTCCTGGCTaGTTTATTCTGTCAATTGAC +
Preference number: 4 (lower is better)
Translates to: DCLDFHCQLDFQSPLPAATSSPG*FILSID
Trigger: GTCAATTGACAGAATAAAGCAGCCAGGAGATGAAGT...AGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTTGCTGCGAACTCCTGTaGAAGTGCCGTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFCCELL*KCRVEL
Trigger: CAGCTCAACACGGCACTTCCACAGGAGTTCGCAGCA...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
CDS-3UTR CCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGGCTGGACACGCCTGCTaGAGACTGCGCTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMAGHAC*RLRLSL
Trigger: AAGAGACAAGCGCAGTCTCCAGCAGGCGTGTCCAGC...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGGTCATGCACAGATGTaGCTTCACGCTGTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCGHAQM*LHAVQR
Trigger: TCGCTGCACAGCGTGAAGCCACATCTGTGCATGACC...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 4 (lower is better)
Translates to: SRGGRRGGFTLYGCLVISRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...CGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGCTCACGGGACCATCCTaGGAGCCTGTGGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMLTGPS*EPVEFL
Trigger: AAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAG...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCTCACGGGACCATCCTaGGAGCCTGTGGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGLTGPS*EPVEFL
Trigger: AAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTAGCGACATGATCTCCTaGATGGCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFSDMIS*MASLSF
Trigger: GAAGCTGAGGCTGGCCATCCAGGAGATCATGTCGCT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTCACCATTACACAATCCAAAATaGCTAGAGCATCAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: LGDSRSTELRRVSLSSSPLHNPK*LEHQSL
Trigger: TAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAA...TGGTGAAGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTCTGACACACTTTGCTaGCTTGTTAATATGCCATTT +
Preference number: 4 (lower is better)
Translates to: SRGGRRGGFTLYGCLVISSDTLC*LVNMPF
Trigger: AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGA...CGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTCTCAGTATTCTTCATTaGCAGTGGAAAATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRLSILH*QWKMLQ
Trigger: CTGAAGCATTTTCCACTGCCAATGAAGAATACTGAG...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTTCCAGTTCTGTCACATaGCTGGAAAGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFSSSVT*LEREAR
Trigger: CCTGGCTTCCCTTTCCAGTCATGTGACAGAACTGGA...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSSPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGCCAGAAGTGCTCCGTaGACACCACTCTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMARSAP*TPLSIR
Trigger: TCTTATAGAGAGTGGTGTTCACGGAGCACTTCTGGC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCCGAGTCTCTCCAGCTaGGAGAACTGCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHPSLSS*ENCSQL
Trigger: GAGCTGGGAGCAGTTCTCTCAGCTGGAGAGACTCGG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGCATGCTCCCAACAAGTaGCAGGTTAGTGTGACCCAT +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRHAPNK*QVSVTH
Trigger: ATGGGTCACACTAACCTGTCACTTGTTGGGAGCATG...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGCCTCAGTCTCTCTCTaGGAACACAGACGAATACTG +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMASVSL*EHRRIL
Trigger: CAGTATTCGTCTGTGTTCTCAGAGAGAGACTGAGGC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGGAAACAGGAAAGCACTaGACACCCGATGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMETGKH*TPDGCL
Trigger: CAGGCAGCCATCGGGTGTTCAGTGCTTTCCTGTTTC...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTGTGGCTTCACGCTGTaGAGCGAGGTAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCCGFTL*SEVAFF
Trigger: GAAAAACGCTACCTCGCTGCACAGCGTGAAGCCACA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTTGCAGCTTTTGCTCTaGCAATTCCAAGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRLQLLL*QFQALL
Trigger: CAGGAGCGCTTGGAATTGGCAGAGCAAAAGCTGCAA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGTCTGTTGCAGCTTTTaGTCTGCCAATTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMVCCSF*SANSKR
Trigger: GCGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGAC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACC +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKARSQS*SLRVCT
Trigger: GGTACAAACTCTTAATGAGCAGGATTGGGAACGTGC...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATGCAGCGCCCCTTTGTaGAGCCGGTCTAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKCSAPL*SRSNRR
Trigger: CCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATGCTACTGCTGGGGTTaGTCACGGGACCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKCYCWG*SRDHPG
Trigger: CCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGGGCTACTGTTGCTACTaGTGGGGTTGCTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLGYCCY*WGCSRD
Trigger: GTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCC...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMVLMLL*QFVQVG
Trigger: GCCGACCTGGACAAACTGGCAAAGAAGCATTAGGAC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp GATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: DLKRPRLSRLPLPTRLSIVLMLL*QFVQVG
Trigger: GCCGACCTGGACAAACTGGCAAAGAAGCATTAGGAC...GATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGCCCGCTTTTCACGTTTaGTCGGCAGGCAGCCACATA +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMPAFHV*SAGSHI
Trigger: TATGTGGCTGCCTGCCGAGCAAACGTGAAAAGCGGG...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGCTCAGCTTCAGCCTGTaGAGGGGGTTGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMLSFSL*RGLLMP
Trigger: TGGCATCAGCAACCCCCTGCACAGGCTGAAGCTGAG...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGTGCATCTTCTTTGGCTaGATAGAGGGGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKCIFFG*IEGEDI
Trigger: TATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCA...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGGATGAGAGCGTGGTaGTTGGTGCTGGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLARMRAW*LVLALR
Trigger: CCTTAGGGCCAGCACCAAGCACCACGCTCTCATCCT...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCCCTTCATCCACTGTGTaGGCCGACTTGCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVPSSTV*ADLQDE
Trigger: CTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAACTGAAAAGACAGGCTaGCTCTGTCTCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKTEKTG*LCLWIC
Trigger: GCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGT...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTTCCTCATCTTCCGTTTaGGGCGTGGCTGCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLASSSSV*GVAASV
Trigger: AACGCTCGCAGCCACGCCGCAAACGGAAGATGAGGA...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGCCACGTGACAGCACGTaGCACTCAGACGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMPRDST*HSDEVS
Trigger: TGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGG...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGGGTCATGCACAGATGTaGCTTCACGCTGTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMGHAQM*LHAVQR
Trigger: TCGCTGCACAGCGTGAAGCCACATCTGTGCATGACC...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAAAGCGCTCCTGTAACTaGCGGTTTTTATCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLEKRSCN*RFLSSV
Trigger: GACTGAAGATAAAAACCGCCAGTTACAGGAGCGCTT...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGAAGCGCTCCTGTAACTaGCGGTTTTTATCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GGFTLYGCLVISYLFSGRKRSCN*RFLSSV
Trigger: GACTGAAGATAAAAACCGCCAGTTACAGGAGCGCTT...CCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTGCCGCAGCACTGCACTaGTGCTGTAGGAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLAAAALH*CCRSLC
Trigger: ACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGC...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERVHFPS*AVRDPS
Trigger: CGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGAC...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTCTCTTCTCTGGAAGGTaGCAAAAGGGTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSLFSGR*QKGHDA
Trigger: GGCGTCATGACCCTTTTGCCACCTTCCAGAGAAGAG...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 4 (lower is better)
Translates to: LSRLPLPTRLSISSARCSRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...AGAGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTACTGTTGCTACTGCTaGGGTTGCTCACGGGACCAT +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSYCCYC*GCSRDH
Trigger: ATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSLWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCCAGACCACAACCGTTaGCCCGTCCCATTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSPDHNR*PVPLGK
Trigger: TTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGG...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTCTTTCTTGGTCAAGTaGTCCAGCATCCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRSFLVK*SSILAS
Trigger: AGACGCCAGGATGCTGGACCACTTGACCAAGAAAGA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAATCTGTAGAAGTAGTGTaGGTAAACAACAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQSVEVV*VNNRRL
Trigger: AAGTCTCCTGTTGTTTACCCACACTACTTCTACAGA...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTTGCAGGATGAGAGCGTaGTGCTTGGTGCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLACRMRA*CLVLAL
Trigger: TAGGGCCAGCACCAAGCACCACGCTCTCATCCTGCA...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGTCTGACACACTTTGCTaGCTTGTTAATATGCCATTT +
Preference number: 4 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQSDTLC*LVNMPF
Trigger: AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGA...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp AGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTTCTCTGGAAGGTaGCAACTTTCTACGATGTTT +
Preference number: 4 (lower is better)
Translates to: RKAGRFHTLWLSCHLVPLLFSGR*QLSTMF
Trigger: AAACATCGTAGAAAGTTGCCACCTTCCAGAGAAGAG...AAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTGGAAGGGACACTTGCTaGTGTCTGGCTTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFGRDTC*CLAFLL
Trigger: CAAGAGGAAAGCCAGACACCAGCAAGTGTCCCTTCC...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CAA 72 bp GGGGGAATGGAGCTCATTGATCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCAACTCGACTTTCAATC +
Preference number: 4 (lower is better)
Translates to: GGMELIDLKRPR*SRLPLPTRLSI
Trigger: GATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGACTGCCATGGGGAACCTaGAATCTGGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERLPWGT*NLGHCP
Trigger: TGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAG...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTGCAGGTCAACTGAGCTaGGGAGAGTGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLAAGQLS*GECPCH
Trigger: ATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGC...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTGTGGCAAAAGGGTCATaGCGCCCAGTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSVAKGS*RPVCPL
Trigger: AAGTGGACAGACTGGGCGTCATGACCCTTTTGCCAC...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253925.12
CDS-3UTR TCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTCAAGGCATCCTGAGATaGGTTATCCGTCTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFQGILR*VIRLGN
Trigger: GTTTCCGAGACGGATAACTCATCTCAGGATGCCTTG...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMSPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATGTGCAGGGGGTTGCTaGTGCCAATCTCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKCAGGC*CQSHAG
Trigger: TCCAGCGTGAGATTGGCATCAGCAACCCCCTGCACA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAATTCTTTAAGGCCAATTaGCAGGATCCAGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: FTLYGCLVISYLFSGRWQFFKAN*QDPANH
Trigger: GTGATTCGCTGGATCCTGTCAATTGGCCTTAAAGAA...TTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCCACAGTCTCAGCCACTaGAGACAAGCTCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVHSLSH*RQAPQI
Trigger: GATTTGGGGAGCTTGTCTTCAGTGGCTGAGACTGTG...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTAGTGACAGGTTAGTGTaGCCCATCACATACCGTCCA +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSSDRLV*PITYRP
Trigger: TGGACGGTATGTGATGGGTCACACTAACCTGTCACT...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTACTCAGGACCGGATGTaGGCTATTAGGGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSTQDRM*AIREPG
Trigger: GCCTGGTTCCCTAATAGCTCACATCCGGTCCTGAGT...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAACTAAGAGACCGCTCATaGCTGGAGACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQLRDRS*LETRHS
Trigger: GGAATGCCTTGTCTCCAGGCATGAGCGGTCTCTTAG...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTTTGCAGCTTTTGCTCTaGCAATTCCAAGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFLQLLL*QFQALL
Trigger: CAGGAGCGCTTGGAATTGGCAGAGCAAAAGCTGCAA...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAGCAGCACTGCACTGGTaGTGTAGGAGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERAALHW*CRSLCG
Trigger: GCCACACAGACTCCTACAGCACCAGTGCAGTGCTGC...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp AAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: KRPRLSRLPLPTRLSISSTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...AGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGCCCGCTTTTCACGTTTaGTCGGCAGGCAGCCACATA +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMPAFHV*SAGSHI
Trigger: TATGTGGCTGCCTGCCGAGCAAACGTGAAAAGCGGG...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGACTCAGCTTCAGCCTGTaGAGGGGGTTGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERLSFSL*RGLLMP
Trigger: TGGCATCAGCAACCCCCTGCACAGGCTGAAGCTGAG...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGGAATCACTCGATCATTaGTCCAAACAAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKESLDH*SKQARL
Trigger: AAGACGTGCTTGTTTGGAGCAATGATCGAGTGATTC...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000532504.5
CDS-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGCGAGCCTGTGTGTTCTaGGTCGGGATCTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMRACVF*VGICNS
Trigger: GCTGTTACAGATCCCGACGCAGAACACACAGGCTCG...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTTCCAAAACAGTTAGAGCTTATTCTCAGTATTCTTCATTGGCAGTGGAAAATGCGAGCCTGTGTGTTCTaGGTCGGGATCTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: LPKQLELILSILHWQWKMRACVF*VGICNS
Trigger: GCTGTTACAGATCCCGACGCAGAACACACAGGCTCG...CATTTTCCACTGCCAATGAAGAATACTGAGAATAAGCTCTAACTGTTTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTCCTTCATCCACTGTGTaGGCCGACTTGCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLAPSSTV*ADLQDE
Trigger: CTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAATTATTAGAGCTGCACTaGACTGCTTTCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKLLELH*TAFWVS
Trigger: GGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAA...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTACTGAAAAGACAGGCTaGCTCTGTCTCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFTEKTG*LCLWIC
Trigger: GCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCTCTAACAGCAGCCTaGTGTTATTCCTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KRPRLSRLPLPTRLSISSALTAA*CYSFLL
Trigger: AAGCAGAAAGGAATAACACCAGGCTGCTGTTAGAGC...AGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTCTTCCTTTTGGGCCATaGCTTCACGGACATCTCGTT +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFLPFGP*LHGHLV
Trigger: AACGAGATGTCCGTGAAGCCATGGCCCAAAAGGAAG...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGGGTCATGCACAGATGTaGCTTCACGCTGTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMGHAQM*LHAVQR
Trigger: TCGCTGCACAGCGTGAAGCCACATCTGTGCATGACC...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGCCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRPLSLM*SSSALS
Trigger: ACTGAGGGCTGAACTAGACCACATGAGACTAAGAGG...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAACCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKPLSLM*SSSALS
Trigger: ACTGAGGGCTGAACTAGACCACATGAGACTAAGAGG...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTCTCGTACCTCTTCTCTaGAAGGTGGCAAAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSLVPLL*KVAKGS
Trigger: TGACCCTTTTGCCACCTTCCAGAGAAGAGGTACGAG...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCTTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVLWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAACCAGACCACAACCGTTaGCCCGTCCCATTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKPDHNR*PVPLGK
Trigger: TTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGG...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGAGCGACATGATCTCCTaGATGGCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMSDMIS*MASLSF
Trigger: GAAGCTGAGGCTGGCCATCCAGGAGATCATGTCGCT...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTCTTTCTTGGTCAAGTaGTCCAGCATCCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCSFLVK*SSILAS
Trigger: AGACGCCAGGATGCTGGACCACTTGACCAAGAAAGA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGCATCTGCATCTTCTTTaGCTGCATAGAGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMHLHLL*LHRGGR
Trigger: TCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATG...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCATCTGCATCTTCTTTaGCTGCATAGAGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMHLHLL*LHRGGR
Trigger: TCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATG...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCACTGCACTGCTTTCTaGGTCTCCTGCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGHCTAF*VSCLHP
Trigger: TGGATGAAGGCAGGAGACCCAGAAAGCAGTGCAGTG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAAATAAATACCACGCCATaGTCTGACACACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FTLYGCLVISYLFSGRWQINTTP*SDTLCW
Trigger: CCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT...TTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGGGCTGCCTCTGTCTCTaGATCTGCTGCACAATAAAT +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMGCLCL*ICCTIN
Trigger: ATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCC...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCTCGTACCTCTTCTCTaGAAGGTGGCAACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMLVPLL*KVATFY
Trigger: GTAGAAAGTTGCCACCTTCCAGAGAAGAGGTACGAG...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAACTCGTACCTCTTCTCTaGAAGGTGGCAACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKLVPLL*KVATFY
Trigger: GTAGAAAGTTGCCACCTTCCAGAGAAGAGGTACGAG...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTTCCGTTTGCGGCGTaGCTGCGAGCGTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHLPFAA*LRAFPS
Trigger: AGATGGAAACGCTCGCAGCCACGCCGCAAACGGAAG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTAAGGCCAGCGTTTCTTaGGTCTCTCTCAGTGTATCA +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFKASVS*VSLSVS
Trigger: TGATACACTGAGAGAGACTCAAGAAACGCTGGCCTT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGATTGGCTCTGTTCCCTTaGCTGCTTACTTATGATTTC +
Preference number: 4 (lower is better)
Translates to: ELIDLKRPRLSRLPLPTRLALFP*LLTYDF
Trigger: GAAATCATAAGTAAGCAGTCAAGGGAACAGAGCCAA...TCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGGCCCGCTGCAGTTCTTaGTTCTTCTCCTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLARCSS*FFSSNC
Trigger: ACAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGC...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAACAAGGCATCCTGAGATaGGTTATCCGTCTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQQGILR*VIRLGN
Trigger: GTTTCCGAGACGGATAACTCATCTCAGGATGCCTTG...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp CTTCCAAAACAGTTAGAGCTTATTCTCAGTATTCTTCATTGGCAGTGGAAAATGAGTCCCAAGGCATCCTaGGATGAGTTATCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: LPKQLELILSILHWQWKMSPKAS*DELSVS
Trigger: CGAGACGGATAACTCATCTCAGGATGCCTTGGGACT...CATTTTCCACTGCCAATGAAGAATACTGAGAATAAGCTCTAACTGTTTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCGCAGTGCCAGTGCACTaGAGTCGAAGGTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVAVPVH*SRRFHL
Trigger: TAGATGAAACCTTCGACTTCAGTGCACTGGCACTGC...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGCAACCTCTGTGTTCCTaGTACATTGCCGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMQPLCS*YIAVHL
Trigger: CAGATGGACGGCAATGTATCAGGAACACAGAGGTTG...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGTACCACGCCATGGTCTaGCACACTTTGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMYHAMV*HTLLAC
Trigger: ACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTA...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCCACCGACTGTGTATGTaGGCCCCCACATTTGCATTT +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVHRLCM*APTFAF
Trigger: AAATGCAAATGTGGGGGCTCACATACACAGTCGGTG...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTTCTTTAGTAAGTGCTaGGAACTCCTGTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRFFSKC*ELLWKC
Trigger: GCACTTCCACAGGAGTTCGCAGCACTTACTAAAGAA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCTAAGAGACCGCTCATaGCTGGAGACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSLRDRS*LETRHS
Trigger: GGAATGCCTTGTCTCCAGGCATGAGCGGTCTCTTAG...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAACTCTGTTCCCTTGACTaGTTACTTATGATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLELCSLD*LLMISW
Trigger: CCAAGAAATCATAAGTAAGCAGTCAAGGGAACAGAG...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTTGCAGCTTTTGCTCTaGCAATTCCAAGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGLQLLL*QFQALL
Trigger: CAGGAGCGCTTGGAATTGGCAGAGCAAAAGCTGCAA...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACC +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRARSQS*SLRVCT
Trigger: GGTACAAACTCTTAATGAGCAGGATTGGGAACGTGC...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp AAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KRPRLSRLPLPTRLSISSISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...AGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp ATCTTCATCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTAGTCCTGGCTACTGTTaGTACTGCTGGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: IFIKPSISPHDQKVVKFSSPGYC*YCWGCS
Trigger: TGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACT...AGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATAGAGCTGCACTGCACTaGTTTCTGGGTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHRAALH*FLGLLP
Trigger: AGGCAGGAGACCCAGAAAGCAGTGCAGTGCAGCTCT...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTACAGAAAGCTGCTCATaGTCCCAACAAGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSTESCS*SQQVTG
Trigger: ACCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGT...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGTGGGCAGTCTCATTATaGTCAGATCTGTTATGCTTT +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKWAVSL*SDLLCF
Trigger: AAAGCATAACAGATCTGAGCATAATGAGACTGCCCA...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAATCGTGTAACTTCCCCTaGGTTAAGGCCAGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQSCNFP*VKASVS
Trigger: AGAAACGCTGGCCTTAACCCAGGGGAAGTTACACGA...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGGCTCTAACAGCAGCCTaGTGTTATTCCTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRALTAA*CYSFLL
Trigger: AAGCAGAAAGGAATAACACCAGGCTGCTGTTAGAGC...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAACTTCCTTTTGGGCCATaGCTTCACGGACATCTCGTT +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQLPFGP*LHGHLV
Trigger: AACGAGATGTCCGTGAAGCCATGGCCCAAAAGGAAG...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGAAGCGCTCCTGTAACTaGCGGTTTTTATCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMKRSCN*RFLSSV
Trigger: GACTGAAGATAAAAACCGCCAGTTACAGGAGCGCTT...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGAAGCGCTCCTGTAACTaGCGGTTTTTATCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRKRSCN*RFLSSV
Trigger: GACTGAAGATAAAAACCGCCAGTTACAGGAGCGCTT...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp GAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 4 (lower is better)
Translates to: EGGEVSHFMVVLSSRTSSRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...AGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGTACTGTTGCTACTGCTaGGGTTGCTCACGGGACCAT +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLYCCYC*GCSRDH
Trigger: ATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTA...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGTTGTGGAGCGAGTCCTaGCTACTGTTGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMLWSES*LLLLLL
Trigger: CAGCAGTAGCAACAGTAGCCAGGACTCGCTCCACAA...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTGGAAGGGACACTTGCTaGTGTCTGGCTTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLAGRDTC*CLAFLL
Trigger: CAAGAGGAAAGCCAGACACCAGCAAGTGTCCCTTCC...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
3UTR CAA 72 bp TCATCAAACCTTCTATCAGTCCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAGACAGCACGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSNLLSVPMTKR*LNSLSKTARAC
Trigger: ACAGGCTCGTGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAAAGGCCAGCGTTTCTTaGGTCTCTCTCAGTGTATCA +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQKASVS*VSLSVS
Trigger: TGATACACTGAGAGAGACTCAAGAAACGCTGGCCTT...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATGCCCGCTGCAGTTCTTaGTTCTTCTCCTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHARCSS*FFSSNC
Trigger: ACAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGC...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGCCTCTCATTAGATTCTaGAAGCAGCTTGTCAACAGT +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMPLIRF*KQLVNS
Trigger: ACTGTTGACAAGCTGCTTTCAGAATCTAATGAGAGG...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGGGAATGGAGCTCATTaGTCTAAAACGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMGNGAH*SKTTKI
Trigger: AATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTTCTTTAAGGCCAATTaGCAGGATCCAGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSFFKAN*QDPANH
Trigger: GTGATTCGCTGGATCCTGTCAATTGGCCTTAAAGAA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGGCCAGAAGTGCTCCGTaGACACCACTCTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLARSAP*TPLSIR
Trigger: TCTTATAGAGAGTGGTGTTCACGGAGCACTTCTGGC...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGGCCAGAAGTGCTCCGTaGACACCACTCTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMARSAP*TPLSIR
Trigger: TCTTATAGAGAGTGGTGTTCACGGAGCACTTCTGGC...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGCAACCTCTGTGTTCCTaGTACATTGCCGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLQPLCS*YIAVHL
Trigger: CAGATGGACGGCAATGTATCAGGAACACAGAGGTTG...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTCAACCTCTGTGTTCCTaGTACATTGCCGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLAQPLCS*YIAVHL
Trigger: CAGATGGACGGCAATGTATCAGGAACACAGAGGTTG...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAAAGCAGAAACCAACTaGAAAGACAGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVKAETN*KDRLPL
Trigger: CAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCTTT...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTACACTACTATTTCCTaGAAGAGCTTTCTAGCACGG +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRYTTIS*KSFLAR
Trigger: CCGTGCTAGAAAGCTCTTTCAGGAAATAGTAGTGTA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAACAATTTCCATATGGTaGCACTGCCTTCCAAAACAG +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKTISIW*HCLPKQ
Trigger: CTGTTTTGGAAGGCAGTGTCACCATATGGAAATTGT...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTAAGAGACCGCTCATaGCTGGAGACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHLRDRS*LETRHS
Trigger: GGAATGCCTTGTCTCCAGGCATGAGCGGTCTCTTAG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATGTGGCTTCACGCTGTaGAGCGAGGTAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKCGFTL*SEVAFF
Trigger: GAAAAACGCTACCTCGCTGCACAGCGTGAAGCCACA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTGTCTGTTGCAGCTTTTaGTCTGCCAATTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSVCCSF*SANSKR
Trigger: GCGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGAC...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTTCCTCAGTGTCTGTTaGAGCTTTTGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSFLSVC*SFCSAN
Trigger: ATTGGCAGAGCAAAAGCTGCAACAGACACTGAGGAA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTTCCTCAGTGTCTGTTaGAGCTTTTGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCFLSVC*SFCSAN
Trigger: ATTGGCAGAGCAAAAGCTGCAACAGACACTGAGGAA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGAGCATCACTCTCGAATaGTTGTGCTACATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMSITLE*LCYICQ
Trigger: TTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCT...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATAGTCCTGGCTACTGTTaGTACTGCTGGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHSPGYC*YCWGCS
Trigger: TGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACT...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAAGTCCTGGCTACTGTTaGTACTGCTGGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERSPGYC*YCWGCS
Trigger: TGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACT...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGGTCCTAATGCTTCTTTaGCAGTTTGTCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMVLMLL*QFVQVG
Trigger: GCCGACCTGGACAAACTGGCAAAGAAGCATTAGGAC...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAATCGACCATTTTCAGCTaGCCTCGAAGGTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQSTIFS*PRRSFL
Trigger: CAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGA...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTCGACCATTTTCAGCTaGCCTCGAAGGTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGSTIFS*PRRSFL
Trigger: CAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGA...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAGAATCACTCGATCATTaGTCCAAACAAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKESLDH*SKQARL
Trigger: AAGACGTGCTTGTTTGGAGCAATGATCGAGTGATTC...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
CDS-3UTR GCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGGAATCACTCGATCATTaGTCCAAACAAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRESLDH*SKQARL
Trigger: AAGACGTGCTTGTTTGGAGCAATGATCGAGTGATTC...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAATTATTTCAGGATGATTaGTGTAGAGCTAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKLFQDD*CRARLR
Trigger: ACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAA...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000528853.1
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGTTATTAGAGCTGCACTaGACTGCTTTCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SNLLSVPMTKRLLNSLSKLLELH*TAFWVS
Trigger: GGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAA...CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAATTCCAGACAGAAAGCTaGTCATGCTCCCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQFQTES*SCSQQV
Trigger: CACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAA...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCTCGTACCTCTTCTCTaGAAGGTGGCAAAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSLVPLL*KVAKGS
Trigger: TGACCCTTTTGCCACCTTCCAGAGAAGAGGTACGAG...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253925.12
CDS-3UTR CCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATACTGTTGCTACTGCTaGGGTTGCTCACGGGACCAT +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKYCCYC*GCSRDH
Trigger: ATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGGGCTGCCTCTGTCTCTaGATCTGCTGCACAATAAAT +
Preference number: 4 (lower is better)
Translates to: SNLLSVPMTKRLLNSLSKGCLCL*ICCTIN
Trigger: ATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCC...CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR TCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTTGGCTCTGTTCCCTTaGCTGCTTACTTATGATTTC +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSLALFP*LLTYDF
Trigger: GAAATCATAAGTAAGCAGTCAAGGGAACAGAGCCAA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTTTCAAGTTTATCATTaGGGTCATGCACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRFQVYH*GHAQMW
Trigger: CCACATCTGTGCATGACCTCAATGATAAACTTGAAA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTCCTCTCATTAGATTCTaGAAGCAGCTTGTCAACAGT +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFPLIRF*KQLVNS
Trigger: ACTGTTGACAAGCTGCTTTCAGAATCTAATGAGAGG...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAATGGAAACTGTTTCTGTaGAAACTGTCGACCATTTTC +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKWKLFL*KLSTIF
Trigger: GAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCA...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCTTCTTTAAGGCCAATTaGCAGGATCCAGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVFFKAN*QDPANH
Trigger: GTGATTCGCTGGATCCTGTCAATTGGCCTTAAAGAA...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATGCAGTGCCAGTGCACTaGAGTCGAAGGTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHAVPVH*SRRFHL
Trigger: TAGATGAAACCTTCGACTTCAGTGCACTGGCACTGC...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAGCAGTGCCAGTGCACTaGAGTCGAAGGTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERAVPVH*SRRFHL
Trigger: TAGATGAAACCTTCGACTTCAGTGCACTGGCACTGC...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAACTCTGTTCCCTTGACTaGTTACTTATGATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKLCSLD*LLMISW
Trigger: CCAAGAAATCATAAGTAAGCAGTCAAGGGAACAGAG...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGCTCTGTTCCCTTGACTaGTTACTTATGATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRLCSLD*LLMISW
Trigger: CCAAGAAATCATAAGTAAGCAGTCAAGGGAACAGAG...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTAGCATCACTCTCGAATaGTTGTGCTACATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSSITLE*LCYICQ
Trigger: TTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCT...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMTFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCTGCATCTTCTTTGGCTaGATAGAGGGGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVCIFFG*IEGEDI
Trigger: TATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCA...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000528853.1
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTGGTCTGACACACTTTaGTGGCTTGTTAATATGCCA +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCWSDTL*WLVNMP
Trigger: TGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGCTCTGTCTCTGGATCTaGTGCACAATAAATACCACG +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMLCLWI*CTINTT
Trigger: CGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAG...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAACACATACCGTCCATCTaGATCTTCTTTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQHIPSI*IFFGCI
Trigger: TATGCAGCCAAAGAAGATGCAGATGGACGGTATGTG...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATCTGCATCTTCTTTaGCTGCATAGAGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSHLHLL*LHRGGR
Trigger: TCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATG...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000528853.1
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGTTACACAATCCAAAATaGCTAGAGCATCAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKLHNPK*LEHQSL
Trigger: TAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAA...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp GGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTGGAATTACACAATCCAAAATaGCTAGAGCATCAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: GEVSHFMVVLSSRTSSLELHNPK*LEHQSL
Trigger: TAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAA...TTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCCTCTTCTCTGGAAGGTaGCAACTTTCTACGATGTTT +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCLFSGR*QLSTMF
Trigger: AAACATCGTAGAAAGTTGCCACCTTCCAGAGAAGAG...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCTCAGTATTCTTCATTaGCAGTGGAAAATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: MELIDLKRPRLSRLPLPTLSILH*QWKMLQ
Trigger: CTGAAGCATTTTCCACTGCCAATGAAGAATACTGAG...AGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR TCA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTGGAAACTGTTTCTGTaGAAACTGTCGACCATTTTC +
Preference number: 4 (lower is better)
Translates to: YFLKELSSTACHRHKFTSWKLFL*KLSTIF
Trigger: GAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR TCA 90 bp ATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCATGGAAACTGTTTCTGTaGAAACTGTCGACCATTTTC +
Preference number: 4 (lower is better)
Translates to: IDLKRPRLSRLPLPTRLSWKLFL*KLSTIF
Trigger: GAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCA...TGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTTTCTTTAGTAAGTGCTaGGAACTCCTGTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSFFSKC*ELLWKC
Trigger: GCACTTCCACAGGAGTTCGCAGCACTTACTAAAGAA...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
CDS-3UTR GCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGTGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLCLCYI*QDTSLL
Trigger: CAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCA...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTACTTTCAATCTCCTCTaGCCGCTGCTCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLATFNLL*PLLCIF
Trigger: GAAAATACAGAGCAGCGGGCAGAGGAGATTGAAAGT...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATCGACCATTTTCAGCTaGCCTCGAAGGTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKSTIFS*PRRSFL
Trigger: CAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTTGCATCTTCTTTGGCTaGATAGAGGGGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLACIFFG*IEGEDI
Trigger: TATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCA...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000528853.1
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTACATTGCCGTCCATCTaGATCTTCTTTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLATLPSI*IFFGCI
Trigger: TATGCAGCCAAAGAAGATGCAGATGGACGGCAATGT...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATTATTAGAGCTGCACTaGACTGCTTTCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKLLELH*TAFWVS
Trigger: GGAGACCCAGAAAGCAGTGCAGTGCAGCTCTAATAA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCTGGTCTGACACACTTTaGTGGCTTGTTAATATGCCA +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVWSDTL*WLVNMP
Trigger: TGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCA...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCTCTGTCTCTGGATCTaGTGCACAATAAATACCACG +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSLCLWI*CTINTT
Trigger: CGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAG...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTCTCTGTCTCTGGATCTaGTGCACAATAAATACCACG +
Preference number: 4 (lower is better)
Translates to: LTPAILNLFMLQNKASLALCLWI*CTINTT
Trigger: CGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAG...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTACTTCATCTCCTGGCTaGTTTATTCTGTCAATTGAC +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFTSSPG*FILSID
Trigger: GTCAATTGACAGAATAAAGCAGCCAGGAGATGAAGT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGAAGCGCTCCTGTAACTaGCGGTTTTTATCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMKRSCN*RFLSSV
Trigger: GACTGAAGATAAAAACCGCCAGTTACAGGAGCGCTT...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp ATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCATCTGTAGAAGTAGTGTaGGTAAACAACAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: IDLKRPRLSRLPLPTRLSSVEVV*VNNRRL
Trigger: AAGTCTCCTGTTGTTTACCCACACTACTTCTACAGA...TGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCTCTGTAGAAGTAGTGTaGGTAAACGTCCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVSVEVV*VNVHLH
Trigger: ATGCAGATGGACGTTTACCCACACTACTTCTACAGA...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528853.1
CDS-3UTR TCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGTTGGCTCTGTTCCCTTaGCTGCTTACTTATGATTTC +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMLALFP*LLTYDF
Trigger: GAAATCATAAGTAAGCAGTCAAGGGAACAGAGCCAA...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGTGGAAACTGTTTCTGTaGAAACTGTCGACCATTTTC +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMWKLFL*KLSTIF
Trigger: GAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCA...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATTCTTTAAGGCCAATTaGCAGGATCCAGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKFFKAN*QDPANH
Trigger: GTGATTCGCTGGATCCTGTCAATTGGCCTTAAAGAA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACC +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHARSQS*SLRVCT
Trigger: GGTACAAACTCTTAATGAGCAGGATTGGGAACGTGC...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGATGCTTGTGCTACATTTaGCAAGACACTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERCLCYI*QDTSLL
Trigger: CAGCAAGCTAGTGTCTTGGCAAATGTAGCACAAGCA...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGGAATCACTCGATCATTaGTCCAAACAAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLESLDH*SKQARL
Trigger: AAGACGTGCTTGTTTGGAGCAATGATCGAGTGATTC...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGATGCATCTTCTTTGGCTaGATAGAGGGGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERCIFFG*IEGEDI
Trigger: TATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCA...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGTGGTCTGACACACTTTaGTGGCTTGTTAATATGCCA +
Preference number: 4 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMWSDTL*WLVNMP
Trigger: TGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCA...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGATTTATATTTGGACATaGAACCATACTCAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRIYIWT*NHTQVP
Trigger: AGGCACTTGAGTATGGTTGCATGTCCAAATATAAAT...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAAGCTCTAACAGCAGCCTaGTGTTATTCCTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKALTAA*CYSFLL
Trigger: AAGCAGAAAGGAATAACACCAGGCTGCTGTTAGAGC...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 4 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCTCTGTAGAAGTAGTGTaGGTAAACAACAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: LFMLQNKASLARKSTVKVSVEVV*VNNRRL
Trigger: AAGTCTCCTGTTGTTTACCCACACTACTTCTACAGA...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTCTGACACACTTTGCTaGCTTGTTAATATGCCATTT +
Preference number: 4 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCSDTLC*LVNMPF
Trigger: AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATATAAATACCACGCCATaGTCTGACACACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHINTTP*SDTLCW
Trigger: CCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGTAAATTATGTGGTTTaGAAGCTACTACTACACTAC +
Preference number: 4 (lower is better)
Translates to: FLKELSSTACHRHKFTSMVNYVV*KLLLHY
Trigger: GTAGTGTAGTAGTAGCTTCCAAACCACATAATTTAC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGCTCTTCTCTGGAAGGTaGCAACTTTCTACGATGTTT +
Preference number: 4 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLLFSGR*QLSTMF
Trigger: AAACATCGTAGAAAGTTGCCACCTTCCAGAGAAGAG...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAAGGGAATGGAGCTCATTaGTCTAAAACGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKGNGAH*SKTTKI
Trigger: AATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCC...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR TCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATGGGAATGGAGCTCATTaGTCTAAAACGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHGNGAH*SKTTKI
Trigger: AATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCC...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGTCACGGACATCTCGTTaGAATTTTGTGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMSRTSR*NFVFIS
Trigger: AGAAATGAACACAAAATTGCAACGAGATGTCCGTGA...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAATCTCCTCTGCCCGCTaGTCTGTATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERISSAR*SVFSFS
Trigger: AGAAAAAGAAAATACAGAGCAGCGGGCAGAGGAGAT...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAAGAATCACTCGATCATTaGTCCAAACAAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKESLDH*SKQARL
Trigger: AAGACGTGCTTGTTTGGAGCAATGATCGAGTGATTC...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
CDS-3UTR GCA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATTATTTCAGGATGATTaGTGTAGAGCTAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKLFQDD*CRARLR
Trigger: ACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000528853.1
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAACAAATTTACAAGTATaGCTCAGTCTCTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQTNLQV*LSLSLR
Trigger: TCTCAGAGAGAGACTGAGGCATACTTGTAAATTTGT...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR GCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTCTGTTCCCTTGACTaGTTACTTATGATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHLCSLD*LLMISW
Trigger: CCAAGAAATCATAAGTAAGCAGTCAAGGGAACAGAG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATTCACGGACATCTCGTTaGAATTTTGTGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHSRTSR*NFVFIS
Trigger: AGAAATGAACACAAAATTGCAACGAGATGTCCGTGA...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR GCA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGATCACGGACATCTCGTTaGAATTTTGTGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: SSKLCGLEATTTLLFPERSRTSR*NFVFIS
Trigger: AGAAATGAACACAAAATTGCAACGAGATGTCCGTGA...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTA +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHRFHTL*LSCHLV
Trigger: TACGAGATGACAAGACAACCATAAAGTGTGAAACCT...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTTTACACAATCCAAAATaGCTAGAGCATCAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: FMLQNKASLARKSTVKVSLHNPK*LEHQSL
Trigger: TAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAA...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CCA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATTCTGACACACTTTGCTaGCTTGTTAATATGCCATTT +
Preference number: 4 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHSDTLC*LVNMPF
Trigger: AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGA...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS GCA 90 bp CCGGCGGGAGCGGGCGAGGAGGCTCCGCGGCGGCTCGCGGGCGGCTaGTCGCTCCGGGAGAGCTTGGGAGCCGACGAAAGCAGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: PAGAGEEAPRRLAGG*SLRESLGADESSPR
Trigger: CCGCGGGCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCGAGCAGCCGCCCGCGAGCCGCCGCGGAGCCTCCTCGCCCGCTCCCGCCGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000389547.7
ENST00000532504.5
CDS CCA 90 bp AGGCTCCGCGGCGGCTCGCGGGCGGCTGCTCGCTCCGGGAGAGCTTaGGAGCCGACGAAAGCAGCCCGCGGCCGGCGTCCGCCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: RLRGGSRAAARSGRA*EPTKAARGRRPPAR
Trigger: GCGGGCAGGCGGACGCCGGCCGCGGGCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCGAGCAGCCGCCCGCGAGCCGCCGCGGAGCCT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000389547.7
ENST00000532504.5
CDS CCA 90 bp TGGAGATGGAAGGGTCATGACGCCCAGTCTGTCCACTTCCCGAGCTaGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGG +
Preference number: 5 (lower is better)
Translates to: WRWKGHDAQSVHFPS*AVRDPSWGGAPTAR
Trigger: CCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTTCCATCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528750.1
CDS CCA 90 bp TGCCTTGGAAGGCTCATCTCGCAGGGCTGCCAGCCGGCCTTTCTGTaGGCGCCGCAGCACTGCACTGGTGCTGTAGGAGTCTGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: CLGRLISQGCQPAFL*APQHCTGAVGVCVA
Trigger: GGCCACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAGCCTTCCAAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526262.5
CDS-3UTR CAA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACTCGCTCCGGGAGAGCTaGGGAGCCGACGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHSLRES*GADESS
Trigger: GCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCGA...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532504.5
CDS-3UTR CAA 90 bp CACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCACTGTGTGCGCCGACTaGCAGGATGAGAGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: HFPSWAVRDPSWGGAPTATVCAD*QDESVV
Trigger: CACCACGCTCTCATCCTGCAAGTCGGCGCACACAGT...GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCTTGCTACTGCTGGGGTaGCTCACGGGACCATCCTGG +
Preference number: 5 (lower is better)
Translates to: ASACPLGDSRSTELRRVSLLLLG*LTGPSW
Trigger: CCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAA...GGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCCCAGTCTGTCCACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGAAGCCTGTGCAGGGGGTaGCTGATGCCAATCTCACGC +
Preference number: 5 (lower is better)
Translates to: AQSVHFPSWAVRDPSWGGSLCRG*LMPISR
Trigger: GCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCT...TCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CACTTCCCGAGCTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCGACAAAAGGTCAGACTaGGAAAGCGCTGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: HFPSWAVRDPSWGGAPTADKRSD*ESAATL
Trigger: GAGGGTGGCAGCGCTTTCCAAGTCTGACCTTTTGTC...GGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCACTCCTCATCTTCCGTTaGCGGCGTGGCTGCGAGCGT +
Preference number: 5 (lower is better)
Translates to: ACPLGDSRSTELRRVSLSLLIFR*RRGCER
Trigger: ACGCTCGCAGCCACGCCGCAAACGGAAGATGAGGAG...TGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGGAGGGGAGGGTCCTCCCACCAAGTTaGTTTTCCTTCCTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LGCEGSFVGWSAHCPEGRVLPPS*FSFLWK
Trigger: CTTCCACAGGAAGGAAAACAAACTTGGTGGGAGGAC...CCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS GCA 90 bp GGTTGTCTTGTCATCTCGTACCTTGGAAGGCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGGGCGCCGCAGCACTGCACTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GCLVISYLGRLISQG*QPAFLWAPQHCTGA
Trigger: AGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAGCCTTCCAAGGTACGAGATGACAAGACAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530798.5
CDS-3UTR CAA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGA +
Preference number: 5 (lower is better)
Translates to: MRAWCLVLALRGATWVSLVCSAP*CSRSNR
Trigger: TCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACAC...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGA +
Preference number: 5 (lower is better)
Translates to: LLLLLGLLTGPSWEPVEFVCSAP*CSRSNR
Trigger: TCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACAC...GAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGGAAGGTGGCAAAAGGGTCATGACGCCCAGTCTGTCCACTTCCCGAGCTGGGGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGA +
Preference number: 5 (lower is better)
Translates to: LEGGKRVMTPSLSTSRAGVCSAP*CSRSNR
Trigger: TCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACAC...CCCAGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTTTTGCCACCTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR CAA 90 bp GTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCCCCTGCCAGACCACAACCGTaGGCCCGTCCCATTGGGCAA +
Preference number: 5 (lower is better)
Translates to: VEFLMSLMSSWLTVCSAPARPQP*ARPIGQ
Trigger: TTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGC...AGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGGCCAGACCACAACCGTaGGCCCGTCCCATTGGGCAA +
Preference number: 5 (lower is better)
Translates to: LTHVTARATQTRCQQRRQARPQP*ARPIGQ
Trigger: TTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGC...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAAGTCACCCGGAAGTTaGCAGGGAGAGTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SVCASACPLGDSRSTELRKSPGS*QGESLL
Trigger: CAGCAGAGACTCTCCCTGCAAACTTCCGGGTGACTT...CCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCAACTGTGTGCGCCGACTaGCAGGATGAGAGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: LCSRSNRRALGEEGGEVSTVCAD*QDESVV
Trigger: CACCACGCTCTCATCCTGCAAGTCGGCGCACACAGT...TGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTACTCCTCATCTTCCGTTaGCGGCGTGGCTGCGAGCGT +
Preference number: 5 (lower is better)
Translates to: AGLTEGLSGRKAGRFHTLLLIFR*RRGCER
Trigger: ACGCTCGCAGCCACGCCGCAAACGGAAGATGAGGAG...TAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACGAGGGGAAGGGACACTaGCTGGTGTCTGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: CSRSNRRALGEEGGEVSHEGKGH*LVSGFP
Trigger: AGGAAAGCCAGACACCAGCAAGTGTCCCTTCCCCTC...GTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS GCA 90 bp GCAAAGAACCCAGACGGTCTTAAGTGGAAAACGCGCTGGGAGGAGTaGAGGCTGTGGGGCGTGACTAACCGTTTGCGGCGTGGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: AKNPDGLKWKTRWEE*RLWGVTNRLRRGCE
Trigger: CTCGCAGCCACGCCGCAAACGGTTAGTCACGCCCCACAGCCTGCACTCCTCCCAGCGCGTTTTCCACTTAAGACCGTCTGGGTTCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CCA 90 bp CCAGACGGTCTTAAGTGGAAAACGCGCTGGGAGGAGTGCAGGCTGTaGGGCGTGACTAACCGTTTGCGGCGTGGCTGCGAGCGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: PDGLKWKTRWEECRL*GVTNRLRRGCERFH
Trigger: ATGGAAACGCTCGCAGCCACGCCGCAAACGGTTAGTCACGCCCCACAGCCTGCACTCCTCCCAGCGCGTTTTCCACTTAAGACCGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS-3UTR CAA 90 bp CTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGTTGCTACTGCTGGGGTaGCTCACGGGACCATCCTGG +
Preference number: 5 (lower is better)
Translates to: LGLLTGPSWEPVEFLMSLLLLLG*LTGPSW
Trigger: CCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAA...CAGGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTAGCCAGACCACAACCGTaGGCCCGTCCCATTGGGCAA +
Preference number: 5 (lower is better)
Translates to: CYCWGCSRDHPGSLWSSLARPQP*ARPIGQ
Trigger: TTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGC...TAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCAGCCTGTGCAGGGGGTaGCTGATGCCAATCTCACGC +
Preference number: 5 (lower is better)
Translates to: ACGVPYVPDVLVADGVQRSLCRG*LMPISR
Trigger: GCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCT...GCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: MRAWCLVLALRGATWVSLMRAWC*VLALRG
Trigger: TCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCACTGTGTGCGCCGACTaGCAGGATGAGAGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: CWGCSRDHPGSLWSSLCPTVCAD*QDESVV
Trigger: CACCACGCTCTCATCCTGCAAGTCGGCGCACACAGT...GGGACATAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACGACAAAAGGTCAGACTaGGAAAGCGCTGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: CAAGLTEGLSGRKAGRFHDKRSD*ESAATL
Trigger: GAGGGTGGCAGCGCTTTCCAAGTCTGACCTTTTGTC...GTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS TCA 90 bp GTCTTAAGTGGAAAACGCGCTGGGAGGAGTGCAGGCTGTGGGGCGTaGCTAACCGTTTGCGGCGTGGCTGCGAGCGTTTCCATCTCTTCG +
Preference number: 5 (lower is better)
Translates to: VLSGKRAGRSAGCGA*LTVCGVAASVSISS
Trigger: CGAAGAGATGGAAACGCTCGCAGCCACGCCGCAAACGGTTAGTCACGCCCCACAGCCTGCACTCCTCCCAGCGCGTTTTCCACTTAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS-3UTR CAA 90 bp GCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTGCCCGCTGCAGTTCTaGATTCTTCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: AAGLTEGLSGRKAGRFHTCPLQF*ILLLQL
Trigger: CAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGCA...AGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp ATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGA +
Preference number: 5 (lower is better)
Translates to: ILGACGVPYVPDVLVADGVCSAP*CSRSNR
Trigger: TCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACAC...ACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTTGCTACTGCTGGGGTaGCTCACGGGACCATCCTGG +
Preference number: 5 (lower is better)
Translates to: CPLGDSRSTELRRVSLSSLLLLG*LTGPSW
Trigger: CCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAA...AGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTTGCTACTGCTGGGGTaGCTCACGGGACCATCCTGG +
Preference number: 5 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVLLLLG*LTGPSW
Trigger: CCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp CCTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTTCTTCTTTGGGGCTTaGTGGAGCGAGTCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: PLCSRSNRRALGEEGGEVFFFGA*WSESWL
Trigger: TAGCCAGGACTCGCTCCACAAAGCCCCAAAGAAGAA...AACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTAGCCTGTGCAGGGGGTaGCTGATGCCAATCTCACGC +
Preference number: 5 (lower is better)
Translates to: PSSTVCADLQDESVVLGASLCRG*LMPISR
Trigger: GCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCT...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVMRAWC*VLALRG
Trigger: TCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS TCA 90 bp TATTGGAGGGCTTTCTCGCAGATGTTCCGTGACGGCCTGAAAGGCTaGAGGCAGGCCACAGGGCAGAGGGGGTCACTGCTAAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: YWRAFSQMFRDGLKG*RQATGQRGSLLSSV
Trigger: GACACTGCTTAGCAGTGACCCCCTCTGCCCTGTGGCCTGCCTTCAGCCTTTCAGGCCGTCACGGAACATCTGCGAGAAAGCCCTCCAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS-3UTR CAA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACTGCCCGCTGCAGTTCTaGATTCTTCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: RAWCLVLALRGATWVSLHCPLQF*ILLLQL
Trigger: CAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGCA...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTTAAGAGTTTGTACCTaGGAAGGCTCATCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: CASACPLGDSRSTELRRVLRVCT*EGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAA...CACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTTGCCAAGACACTAGCTaGCTGGGCACGTTCCCAATC +
Preference number: 5 (lower is better)
Translates to: SRSNRRALGEEGGEVSHFCQDTS*LGTFPI
Trigger: GATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCA...AAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCATTCTTCTTTGGGGCTTaGTGGAGCGAGTCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LCSRSNRRALGEEGGEVSFFFGA*WSESWL
Trigger: TAGCCAGGACTCGCTCCACAAAGCCCCAAAGAAGAA...TGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGGGCTGTGAGGGATCCTTCGTGGGGTGGAGCGCCCACTGCCCGGAGGGGAGGCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LGCEGSFVGWSAHCPEGRPMTKR*LNSLSK
Trigger: CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGG...CCTCCCCTCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CGATGGCTGCCTGAGAGAAACGTCCCAGGACACACTGACCCACGTGACAGCACGAAGTCACCCGGAAGTTaGCAGGGAGAGTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RWLPERNVPGHTDPRDSTKSPGS*QGESLL
Trigger: CAGCAGAGACTCTCCCTGCAAACTTCCGGGTGACTT...CGTGCTGTCACGTGGGTCAGTGTGTCCTGGGACGTTTCTCTCAGGCAGCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp GTGAAGCCAGCACCGAGGAAGGAAGCAGAGCTGGGAAACGGTGTTAAGGGACATCTCCTCATCTTCCGTTaGCGGCGTGGCTGCGAGCGT +
Preference number: 5 (lower is better)
Translates to: VKPAPRKEAELGNGVKGHLLIFR*RRGCER
Trigger: ACGCTCGCAGCCACGCCGCAAACGGAAGATGAGGAG...ATGTCCCTTAACACCGTTTCCCAGCTCTGCTTCCTTCCTCGGTGCTGGCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS TCA 90 bp AAACTCTTGCTTTGGCTATTGGAGGGCTTTCTCGCAGATGTTCCGTaGCGGCCTGAAAGGCTGAAGGCAGGCCACAGGGCAGAGGGGGTC +
Preference number: 5 (lower is better)
Translates to: KLLLWLLEGFLADVP*RPERLKAGHRAEGV
Trigger: GACCCCCTCTGCCCTGTGGCCTGCCTTCAGCCTTTCAGGCCGTCACGGAACATCTGCGAGAAAGCCCTCCAATAGCCAAAGCAAGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS TCA 90 bp AAGGTGACCCCAGTGCACCAACCACATCCAGGGCAAGGGAAGCAGTaGCAAAGAGGAGAGGGGCACACGCATAAGCCACAGGCACAGAGA +
Preference number: 5 (lower is better)
Translates to: KVTPVHQPHPGQGKQ*QRGEGHTHKPQAQR
Trigger: TCTCTGTGCCTGTGGCTTATGCGTGTGCCCCTCTCCTCTTTGTCACTGCTTCCCTTGCCCTGGATGTGGTTGGTGCACTGGGGTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CCA 90 bp GCTGTAGGAGTCTGTGTGGCCGTCTGCCATGGGGAACCTGAAATCTaGGACACTGCCCAAGTGGGGTCGGCTCTTAGTCTCATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: AVGVCVAVCHGEPEI*DTAQVGSALSLMWS
Trigger: AGACCACATGAGACTAAGAGCCGACCCCACTTGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAGACGGCCACACAGACTCCTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526369.3
ENST00000532504.5
CDS-3UTR CAA 90 bp TGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGCTGCTCATTAAGAGTTaGTACCTTGGAAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: CASACPLGDSRSTELRRVLLIKS*YLGRLI
Trigger: GATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAG...CACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AGCAGTGCCAGTGCACTGAAGTCGAAGGTTTCATCTAAGGCCAGAAGTGCTCCGGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGA +
Preference number: 5 (lower is better)
Translates to: SSASALKSKVSSKARSAPVCSAP*CSRSNR
Trigger: TCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACAC...CGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS TCA 90 bp CCACTGTCATGTGAAACAACCAGGGAAGAGCTCAGACACTGCTCCTaGGGCAGGCTGTGGGAAAGGAGCTCTTGGAGCAACAGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PLSCETTREELRHCS*GRLWERSSWSNRGG
Trigger: TCCTCCCCTGTTGCTCCAAGAGCTCCTTTCCCACAGCCTGCCTCAGGAGCAGTGTCTGAGCTCTTCCCTGGTTGTTTCACATGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CCA 90 bp ACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTACCTTGGAAGGCTCATCTCGCAGGG +
Preference number: 5 (lower is better)
Translates to: TEGLSGRKAGRFHTL*LSCHLVPWKAHLAG
Trigger: CCCTGCGAGATGAGCCTTCCAAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530798.5
CDS-3UTR CAA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACTTAAGAGTTTGTACCTaGGAAGGCTCATCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: RAWCLVLALRGATWVSLHLRVCT*EGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAA...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AGGTGGGGTGGTGGTGGCCATGGGCTCTGCGAATCCCAGGCTCAATGGCAACACTTAAGAGTTTGTACCTaGGAAGGCTCATCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: RWGGGGHGLCESQAQWQHLRVCT*EGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAA...GTGTTGCCATTGAGCCTGGGATTCGCAGAGCCCATGGCCACCACCACCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTTGCCAAGACACTAGCTaGCTGGGCACGTTCCCAATC +
Preference number: 5 (lower is better)
Translates to: ILGACGVPYVPDVLVADGCQDTS*LGTFPI
Trigger: GATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCA...ACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGCACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ASVCASACPLGDSRSTELHFMVV*SSRTSS
Trigger: AGAAGAGGTACGAGATGACAAGACAACCATAAAGTG...CAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTCTGTTGCTACTGCTGGGGTaGCTCACGGGACCATCCTGG +
Preference number: 5 (lower is better)
Translates to: CLDFHCQLDFQSPLPAALLLLLG*LTGPSW
Trigger: CCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAA...CAGAGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTGGGCAAAACGGCCCTTTTCTTTCTaGCCAAACAAGCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: PTQSSSQTTTVGPSHWAKRPFSF*PNKRPM
Trigger: CATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGGCCG...TTTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CCAACCCAGAGCTCTAGCCAGACCACAACCGTTGGCCCGTCCCATTGGGCAAAATGCTTCTTTGCCAGTTaGTCCAGGTCGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: PTQSSSQTTTVGPSHWAKCFFAS*SRSALF
Trigger: GAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA...TTTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGCTAGAGCTCTGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: LTHVTARATQTRCQQRRQCPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGCCAGACCACAACCGTaGGCCCGTCCCATTGGGCAA +
Preference number: 5 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRARPQP*ARPIGQ
Trigger: TTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS TCA 90 bp TTCAGAGAGGCATTCCCTGTTTCCAAAGAATGCAGGGGTTGTCTCTaGACGTACCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: FREAFPVSKECRGCL*TYRSRCGRGRRAGQ
Trigger: CTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGGTACGTTCAGAGACAACCCCTGCATTCTTTGGAAACAGGGAATGCCTCTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532793.1
CDS-3UTR CAA 90 bp CTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTGCCCGCTGCAGTTCTaGATTCTTCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: LTEGLSGRKAGRFHTLWLCPLQF*ILLLQL
Trigger: CAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGCA...CAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCCACCTGCTCATTAAGAGTTaGTACCTTGGAAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: RAWCLVLALRGATWVSLHLLIKS*YLGRLI
Trigger: GATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAG...GTGGAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTGCTTCTTTGCCAGTTaGTCCAGGTCGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: NRRALGEEGGEVSHFMVVCFFAS*SRSALF
Trigger: GAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA...GACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: CPLGDSRSTELRRVSLSSCPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...AGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: PSSTVCADLQDESVVLGACPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGAGCCTGTGCAGGGGGTaGCTGATGCCAATCTCACGC +
Preference number: 5 (lower is better)
Translates to: VSETPACPNASLPVCPGRSLCRG*LMPISR
Trigger: GCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCT...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp ACTGTCGACCATTTTCAGCTGCCCTCGAAGGTCTTTCTTGGTCAAGTGGTCCAGATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: TVDHFQLPSKVFLGQVVQMRAWC*VLALRG
Trigger: TCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT...CTGGACCACTTGACCAAGAAAGACCTTCGAGGGCAGCTGAAAATGGTCGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCATCAGCCTTCCTAAGCTaGGAAGTAAGTTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: LCSRSNRRALGEEGGEVSSAFLS*EVSSNS
Trigger: ACTGTTGGAACTTACTTCCAAGCTTAGGAAGGCTGA...TGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTTCAGCCTTCCTAAGCTaGGAAGTAAGTTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFSAFLS*EVSSNS
Trigger: ACTGTTGGAACTTACTTCCAAGCTTAGGAAGGCTGA...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGAGTTTGTACCTTGCCTaGGAAGGCTCATCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: RRALGEEGGEVSHFMVVLSLYLA*EGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGCAAGGTACAAACT...CAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526262.5
CDS-3UTR CAA 90 bp ATGGCTAGTGTGTGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGTTCACGGACATCTCGTaGCAATTTTGTGTTCATTTC +
Preference number: 5 (lower is better)
Translates to: MASVCASACPLGDSRSTEFTDIS*QFCVHF
Trigger: GAAATGAACACAAAATTGCAACGAGATGTCCGTGAA...CTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCGCGTCGGCCTGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTTTTCAAGTTTATCATaGAGGTCATGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: CASACPLGDSRSTELRRVFSSLS*RSCTDV
Trigger: CACATCTGTGCATGACCTCAATGATAAACTTGAAAA...CACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTGTCTCTCTTCAGCCTaGGAAAGCGCTGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: RLSRLPLPTRLSISSARCCLSSA*ESAATL
Trigger: GAGGGTGGCAGCGCTTTCCAAGGCTGAAGAGAGACA...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532504.5
CDS-3UTR CAA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTTAAGAGTTTGTACCTaGGAAGGCTCATCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVLRVCT*EGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TCCTGGCTACTGTTGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SWLLLLLLGLLTGPSWEPLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...AGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: CSRSNRRALGEEGGEVSHFHTLW*SCHLVP
Trigger: AGGTACGAGATGACAAGACAACCATAAAGTGTGAAA...GTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTCACCACGGCCCTTTTCTTTCTaGCCAAACAAGCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: LGDSRSTELRRVSLSSSPRPFSF*PNKRPM
Trigger: CATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGGCCG...TGGTGAAGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTGCCAGACCACAACCGTaGGCCCGTCCCATTGGGCAA +
Preference number: 5 (lower is better)
Translates to: KHQLVLMLLCQFVQVGPFARPQP*ARPIGQ
Trigger: TTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGC...AAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCTACTGCTGGGGTTGCTCACGGGACCATCCTGGGAGCCTGTGGAGTTCCTTATGTGTTCCTGATACATaGCCGTCCATCTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: CYCWGCSRDHPGSLWSSLCVPDT*PSICIF
Trigger: GAAGATGCAGATGGACGGCAATGTATCAGGAACACA...TAAGGAACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATTAAGAGTTTGTACCTaGCCTTGGAAGGCTCATCTC +
Preference number: 5 (lower is better)
Translates to: AGLTEGLSGRKAGRFHTLLRVCT*PWKAHL
Trigger: GAGATGAGCCTTCCAAGGCAAGGTACAAACTCTTAA...TAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526262.5
CDS-3UTR CAA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAAACCTCGCACATCATCTaGCTCGCCGGCGGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKTSHII*LAGGSG
Trigger: CCCGCTCCCGCCGGCGAGCAAGATGATGTGCGAGGT...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253925.12
ENST00000532504.5
CDS-3UTR CAA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGACCTCGCACATCATCTaGCTCGCCGGCGGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: FLKELSSTACHRHKFTSMTSHII*LAGGSG
Trigger: CCCGCTCCCGCCGGCGAGCAAGATGATGTGCGAGGT...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp CCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTCTGCTCATTAAGAGTTaGTACCTTGGAAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: PSSTVCADLQDESVVLGALLIKS*YLGRLI
Trigger: GATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAG...AGCACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: CPLGDSRSTELRRVSLSSLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...AGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: LGACGVPYVPDVLVADGVLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...CACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CACACTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGCACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: HTDPRDSTCHSDEVSATEHFMVV*SSRTSS
Trigger: AGAAGAGGTACGAGATGACAAGACAACCATAAAGTG...CTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp GATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCTAAGTCACCCGGAAGTTaGCAGGGAGAGTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: DCLDFHCQLDFQSPLPAAKSPGS*QGESLL
Trigger: CAGCAGAGACTCTCCCTGCAAACTTCCGGGTGACTT...AGCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: RKAGRFHTLWLSCHLVPLMRAWC*VLALRG
Trigger: TCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT...AAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS TCA 90 bp GAGAAACCACTCAGCACCTTCATTTTCAGCAAGGCCACTGTCATGTaGAACAACCAGGGAAGAGCTCAGACACTGCTCCTGAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: EKPLSTFIFSKATVM*NNQGRAQTLLLRQA
Trigger: AGCCTGCCTCAGGAGCAGTGTCTGAGCTCTTCCCTGGTTGTTTCACATGACAGTGGCCTTGCTGAAAATGAAGGTGCTGAGTGGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CCA 90 bp AAGGTGGCAACTGAGCATGCTGTGAAGAATCGCTATAGCATGGGGTaGAACTGGGAGGGGAGGTGGATGAGTAAACTACTGACTGATGGG +
Preference number: 5 (lower is better)
Translates to: KVATEHAVKNRYSMG*NWEGRWMSKLLTDG
Trigger: CCCATCAGTCAGTAGTTTACTCATCCACCTCCCCTCCCAGTTCCACCCCATGCTATAGCGATTCTTCACAGCATGCTCAGTTGCCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528750.1
CDS-3UTR CAA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCTTCACGGACATCTCGTaGCAATTTTGTGTTCATTTC +
Preference number: 5 (lower is better)
Translates to: MRAWCLVLALRGATWVSLFTDIS*QFCVHF
Trigger: GAAATGAACACAAAATTGCAACGAGATGTCCGTGAA...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp CTTTGTGCAGCCGGTCTAACCGAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTTTTTCAAGTTTATCATaGAGGTCATGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: LCAAGLTEGLSGRKAGRFFSSLS*RSCTDV
Trigger: CACATCTGTGCATGACCTCAATGATAAACTTGAAAA...AAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAGACCGGCTGCACAAAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTGTCTGTTGCAGCTTTaGCTCTGCCAATTCCAAGCG +
Preference number: 5 (lower is better)
Translates to: SRGGRRGGFTLYGCLVISCLLQL*LCQFQA
Trigger: CGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGACA...CGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGTGCAGCGCTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: ACGVPYVPDVLVADGVQRFHTLW*SCHLVP
Trigger: AGGTACGAGATGACAAGACAACCATAAAGTGTGAAA...GCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp ATGAGAGCGTGGTGCTTGGTGCTGGCCCTAAGGGGAGCCACATGGGTGTCTCTCTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: MRAWCLVLALRGATWVSLFHTLW*SCHLVP
Trigger: AGGTACGAGATGACAAGACAACCATAAAGTGTGAAA...GAGAGACACCCATGTGGCTCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp GGGGGAATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGTTGCTACTGCTGGGGTaGCTCACGGGACCATCCTGG +
Preference number: 5 (lower is better)
Translates to: GGMELIDLKRPRLSRLPLLLLLG*LTGPSW
Trigger: CCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAA...CAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCATTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTTTCTTCTTTGGGGCTTaGTGGAGCGAGTCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRFFFGA*WSESWL
Trigger: TAGCCAGGACTCGCTCCACAAAGCCCCAAAGAAGAA...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTTGCTTCTTTGCCAGTTaGTCCAGGTCGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRCFFAS*SRSALF
Trigger: GAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGACCCACGTGACAGCACGTGCCACTCAGACGAGGTGTCAGCAACGGAGACAGTCTCAGTATTCTTCATaGGCAGTGGAAAATGCTTCA +
Preference number: 5 (lower is better)
Translates to: LTHVTARATQTRCQQRRQSQYSS*AVENAS
Trigger: TGAAGCATTTTCCACTGCCAATGAAGAATACTGAGA...CTGTCTCCGTTGCTGACACCTCGTCTGAGTGGCACGTGCTGTCACGTGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS CCA 90 bp ACTTCTCATGCAAGGAGCAGACTCTCTCCGTGCCAAGCATATTCATaGAAGGAGAAAGGGCCACACAGTCAGTCACATGGAGGCTCAACT +
Preference number: 5 (lower is better)
Translates to: TSHARSRLSPCQAYS*KEKGPHSQSHGGST
Trigger: AGTTGAGCCTCCATGTGACTGACTGTGTGGCCCTTTCTCCTTCCATGAATATGCTTGGCACGGAGAGAGTCTGCTCCTTGCATGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS-3UTR CAA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTTGTCTGTTGCAGCTTTaGCTCTGCCAATTCCAAGCG +
Preference number: 5 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRCLLQL*LCQFQA
Trigger: CGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGACA...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATTTCCTGTGGTCGTTCTAGATGTGGGCGGGGCAGACGGGCTGGTCAGCGACATGATTCTGAAAGCAGCTaGTCAACAGTGTCTGATAAA +
Preference number: 5 (lower is better)
Translates to: ISCGRSRCGRGRRAGQRHDSESS*STVSDK
Trigger: TTTATCAGACACTGTTGACAAGCTGCTTTCAGAATC...ATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACCACAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TCCTGGGAGCCTGTGGAGTTCCTTATGTCCCTGATGTCCTCGTGGCTGACGGTGGATTCTGAAAGCAGCTaGTCAACAGTGTCTGATAAA +
Preference number: 5 (lower is better)
Translates to: SWEPVEFLMSLMSSWLTVDSESS*STVSDK
Trigger: TTTATCAGACACTGTTGACAAGCTGCTTTCAGAATC...CACCGTCAGCCACGAGGACATCAGGGACATAAGGAACTCCACAGGCTCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGA +
Preference number: 5 (lower is better)
Translates to: FLKELSSTACHRHKFTSMVCSAP*CSRSNR
Trigger: TCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACAC...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp ACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTCGGCCCTTTTCTTTCTaGCCAAACAAGCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: TPACPNASLPVCPGRPFSRPFSF*PNKRPM
Trigger: CATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGGCCG...AGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: GRKAGRFHTLWLSCHLVPCPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...AGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCCTTCATCCACTGTGTGCGCCGACTTGCAGGATGAGAGCGTGGTGCTTGGTGTTTTCAAGTTTATCATaGAGGTCATGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: CLHPLCAPTCRMRAWCLVFSSLS*RSCTDV
Trigger: CACATCTGTGCATGACCTCAATGATAAACTTGAAAA...CACCAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGATGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCCCGCTGGGCGATAGCAGGTCAACTGAGCTGAGGAGAGTGTCCCTGTCATCTTTTTCAAGTTTATCATaGAGGTCATGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: CPLGDSRSTELRRVSLSSFSSLS*RSCTDV
Trigger: CACATCTGTGCATGACCTCAATGATAAACTTGAAAA...AGATGACAGGGACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AGCAGAAACCAACTGAAAAGACAGGCTGCCTCTGTCTCTGGATCTGCTGCACAATGTCTGTTGCAGCTTTaGCTCTGCCAATTCCAAGCG +
Preference number: 5 (lower is better)
Translates to: SRNQLKRQAASVSGSAAQCLLQL*LCQFQA
Trigger: CGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGACA...TTGTGCAGCAGATCCAGAGACAGAGGCAGCCTGTCTTTTCAGTTGGTTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp GAAGATCAGCAAACACAGGTTCGAAACAGGAAAGCACTGAACACCCGATGGCTGTGTCTGTTGCAGCTTTaGCTCTGCCAATTCCAAGCG +
Preference number: 5 (lower is better)
Translates to: EDQQTQVRNRKALNTRWLCLLQL*LCQFQA
Trigger: CGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGACA...CAGCCATCGGGTGTTCAGTGCTTTCCTGTTTCGAACCTGTGTTTGCTGATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGTTAAGAGTTTGTACCTaGGAAGGCTCATCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: VSETPACPNASLPVCPGRLRVCT*EGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAA...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCCTGCTCATTAAGAGTTaGTACCTTGGAAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: LSGRKAGRFHTLWLSCHLLLIKS*YLGRLI
Trigger: GATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAG...GAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCCACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KGSRGGRRGGFTLYGCLVHFMVV*SSRTSS
Trigger: AGAAGAGGTACGAGATGACAAGACAACCATAAAGTG...GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TCTCTGGAAGGTGGCAAAAGGGTCATGACGCCCAGTCTGTCCACTTCCCGAGCTTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: SLEGGKRVMTPSLSTSRAFHTLW*SCHLVP
Trigger: AGGTACGAGATGACAAGACAACCATAAAGTGTGAAA...AGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTTTTGCCACCTTCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533894.5
CDS-3UTR CAA 90 bp AGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTTTCTTCTTTGGGGCTTaGTGGAGCGAGTCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: RRGGFTLYGCLVISYLFSFFFGA*WSESWL
Trigger: TAGCCAGGACTCGCTCCACAAAGCCCCAAAGAAGAA...AGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGACAGCAGCCAGACCACAACCGTaGGCCCGTCCCATTGGGCAA +
Preference number: 5 (lower is better)
Translates to: LLSVPMTKRLLNSLSKTAARPQP*ARPIGQ
Trigger: TTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGC...TGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGAGCCTGTGCAGGGGGTaGCTGATGCCAATCTCACGC +
Preference number: 5 (lower is better)
Translates to: FLKELSSTACHRHKFTSMSLCRG*LMPISR
Trigger: GCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCT...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGACTGTGTGCGCCGACTaGCAGGATGAGAGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMTVCAD*QDESVV
Trigger: CACCACGCTCTCATCCTGCAAGTCGGCGCACACAGT...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCTGCTCATTAAGAGTTaGTACCTTGCCTTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: VSETPACPNASLPVCPGRLLIKS*YLALEG
Trigger: GCCTTCCAAGGCAAGGTACAAACTCTTAATGAGCAG...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526262.5
CDS-3UTR CAA 90 bp GGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATTTCACGGACATCTCGTaGCAATTTTGTGTTCATTTC +
Preference number: 5 (lower is better)
Translates to: GLSGRKAGRFHTLWLSCHFTDIS*QFCVHF
Trigger: GAAATGAACACAAAATTGCAACGAGATGTCCGTGAA...ATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGTGTCTCTCTTCAGCCTaGGAAAGCGCTGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: FLKELSSTACHRHKFTSMCLSSA*ESAATL
Trigger: GAGGGTGGCAGCGCTTTCCAAGGCTGAAGAGAGACA...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp GTCTCGGAAACACCAGCTTGTCCTAATGCTTCTTTGCCAGTTTGTCCAGGTCGGCTGCTCATTAAGAGTTaGTACCTTGGAAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: VSETPACPNASLPVCPGRLLIKS*YLGRLI
Trigger: GATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAG...CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: GRKAGRFHTLWLSCHLVPLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...AGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCGTGTGCAGCGCCCCTTaGTGCAGCCGGTCTAACCGA +
Preference number: 5 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGVCSAP*CSRSNR
Trigger: TCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACAC...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGTGCTTCTTTGCCAGTTaGTCCAGGTCGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKCFFAS*SRSALF
Trigger: GAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: RRGGFTLYGCLVISYLFSCPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...AGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAATCGCTCCGGGAGAGCTaGGGAGCCGACGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKSLRES*GADESS
Trigger: GCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCGA...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253925.12
ENST00000532504.5
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGATCGCTCCGGGAGAGCTaGGGAGCCGACGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERSLRES*GADESS
Trigger: GCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCGA...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp ATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTTGCCAAGACACTAGCTaGCTGGGCACGTTCCCAATC +
Preference number: 5 (lower is better)
Translates to: MELIDLKRPRLSRLPLPTCQDTS*LGTFPI
Trigger: GATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCA...AGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp GGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GRKAGRFHTLWLSCHLVPHFMVV*SSRTSS
Trigger: AGAAGAGGTACGAGATGACAAGACAACCATAAAGTG...AGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAATTGCTACTGCTGGGGTaGCTCACGGGACCATCCTGG +
Preference number: 5 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQLLLLG*LTGPSW
Trigger: CCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAA...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCAGCCTGTGCAGGGGGTaGCTGATGCCAATCTCACGC +
Preference number: 5 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGSLCRG*LMPISR
Trigger: GCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCT...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGAAGTCACCCGGAAGTTaGCAGGGAGAGTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMKSPGS*QGESLL
Trigger: CAGCAGAGACTCTCCCTGCAAACTTCCGGGTGACTT...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCATGAGAGCGTGGTGCTaGGTGCTGGCCCTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGMRAWC*VLALRG
Trigger: TCCCCTTAGGGCCAGCACCAAGCACCACGCTCTCAT...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCACTGTGTGCGCCGACTaGCAGGATGAGAGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: LFMLQNKASLARKSTVKVTVCAD*QDESVV
Trigger: CACCACGCTCTCATCCTGCAAGTCGGCGCACACAGT...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS GCA 90 bp TCCAGCGCTGACGTGCTCCTTGGAGAAATGTGTGAGGCTCTTCATTaGAACAAGAATTTGTTTTCTCCTGAGGAGACTAAAAGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: SSADVLLGEMCEALH*NKNLFSPEETKSRD
Trigger: GTCTCTGCTTTTAGTCTCCTCAGGAGAAAACAAATTCTTGTTGCAATGAAGAGCCTCACACATTTCTCCAAGGAGCACGTCAGCGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS GCA 90 bp AAACCAACAATTTCAACTTCTCATGCAAGGAGCAGACTCTCTCCGTaGCAAGCATATTCATGGAAGGAGAAAGGGCCACACAGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: KPTISTSHARSRLSP*QAYSWKEKGPHSQS
Trigger: TGACTGACTGTGTGGCCCTTTCTCCTTCCATGAATATGCTTGGCACGGAGAGAGTCTGCTCCTTGCATGAGAAGTTGAAATTGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS-3UTR CAA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTTTCACGGACATCTCGTaGCAATTTTGTGTTCATTTC +
Preference number: 5 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRFTDIS*QFCVHF
Trigger: GAAATGAACACAAAATTGCAACGAGATGTCCGTGAA...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TCTCAGCCACTGAAGACAAGCTCCCCAAATCCAGAGACTAGGCTAGGAAAGCGTGATTCTGAAAGCAGCTaGTCAACAGTGTCTGATAAA +
Preference number: 5 (lower is better)
Translates to: SQPLKTSSPNPETRLGKRDSESS*STVSDK
Trigger: TTTATCAGACACTGTTGACAAGCTGCTTTCAGAATC...ACGCTTTCCTAGCCTAGTCTCTGGATTTGGGGAGCTTGTCTTCAGTGGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTGCCAAGACACTAGCTaGCTGGGCACGTTCCCAATC +
Preference number: 5 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCCQDTS*LGTFPI
Trigger: GATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TTAACACCAGCCATTTTAAATCTGTTCATGCTGCAGAATAAAGCATCTCTTGCTTTGCTACTGCTGGGGTaGCTCACGGGACCATCCTGG +
Preference number: 5 (lower is better)
Translates to: LTPAILNLFMLQNKASLALLLLG*LTGPSW
Trigger: CCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAA...AGCAAGAGATGCTTTATTCTGCAGCATGAACAGATTTAAAATGGCTGGTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGTTCTTCTTTGGGGCTTaGTGGAGCGAGTCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMFFFGA*WSESWL
Trigger: TAGCCAGGACTCGCTCCACAAAGCCCCAAAGAAGAA...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAACGGCCCTTTTCTTTCTaGCCAAACAAGCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKRPFSF*PNKRPM
Trigger: CATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGGCCG...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGCGGCCCTTTTCTTTCTaGCCAAACAAGCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRRPFSF*PNKRPM
Trigger: CATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGGCCG...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAGCCAGACCACAACCGTaGGCCCGTCCCATTGGGCAA +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERARPQP*ARPIGQ
Trigger: TTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGC...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTAGCCTGTGCAGGGGGTaGCTGATGCCAATCTCACGC +
Preference number: 5 (lower is better)
Translates to: FMLQNKASLARKSTVKVSSLCRG*LMPISR
Trigger: GCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCT...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AGATTGTCTAGACTTCCACTGCCAACTCGACTTTCAATCTCCTCTGCCCGCTGCCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RLSRLPLPTRLSISSARCPMTKR*LNSLSK
Trigger: CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGG...GCAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGGAGGGGAAGGGACACTaGCTGGTGTCTGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMEGKGH*LVSGFP
Trigger: AGGAAAGCCAGACACCAGCAAGTGTCCCTTCCCCTC...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGCGAATCACTCGATCATaGCTCCAAACAAGCACGTCA +
Preference number: 5 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKRITRS*LQTSTS
Trigger: TGACGTGCTTGTTTGGAGCAATGATCGAGTGATTCG...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS-3UTR CAA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTGTCTGTTGCAGCTTTaGCTCTGCCAATTCCAAGCG +
Preference number: 5 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRCLLQL*LCQFQA
Trigger: CGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGACA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTTGTCTCTCTTCAGCCTaGGAAAGCGCTGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: FMLQNKASLARKSTVKVSCLSSA*ESAATL
Trigger: GAGGGTGGCAGCGCTTTCCAAGGCTGAAGAGAGACA...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000532504.5
ENST00000644155.1
CDS-3UTR CAA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCCGGCCCTTTTCTTTCTaGCCAAACAAGCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCRPFSF*PNKRPM
Trigger: CATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGGCCG...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTGCTTCTTTGCCAGTTaGTCCAGGTCGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCCFFAS*SRSALF
Trigger: GAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: FLKELSSTACHRHKFTSMCPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAAGTCACCCGGAAGTTaGCAGGGAGAGTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LFMLQNKASLARKSTVKVKSPGS*QGESLL
Trigger: CAGCAGAGACTCTCCCTGCAAACTTCCGGGTGACTT...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000528853.1
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp CTGTTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCTGCCCGCTGCAGTTCTaGATTCTTCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: LFMLQNKASLARKSTVKVCPLQF*ILLLQL
Trigger: CAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGCA...GACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATCTTCATCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTGCCAAGACACTAGCTaGCTGGGCACGTTCCCAATC +
Preference number: 5 (lower is better)
Translates to: IFIKPSISPHDQKVVKFSCQDTS*LGTFPI
Trigger: GATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCA...AGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGATGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AATGCTTCTTTGCCAGTTTGTCCAGGTCGGCCCTTTTCTTTCTTGCCAAACAAGCACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: NASLPVCPGRPFSFLPNKHFMVV*SSRTSS
Trigger: AGAAGAGGTACGAGATGACAAGACAACCATAAAGTG...CTTGTTTGGCAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000530390.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGCGGCCCTTTTCTTTCTaGCCAAACAAGCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: SNLLSVPMTKRLLNSLSKRPFSF*PNKRPM
Trigger: CATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGGCCG...CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp CGTTTTAGATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAATGCTTCTTTGCCAGTTaGTCCAGGTCGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: RFRSLLMFQTESCSCSQQCFFAS*SRSALF
Trigger: GAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA...TTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGATCTAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTGTCCTAATGCTTCTTaGCCAGTTTGTCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCCPNAS*PVCPGR
Trigger: CCGACCTGGACAAACTGGCAAAGAAGCATTAGGACA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGCGAATCACTCGATCATaGCTCCAAACAAGCACGTCT +
Preference number: 5 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRRITRS*LQTSTS
Trigger: AGACGTGCTTGTTTGGAGCAATGATCGAGTGATTCG...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp AGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTCTCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RRGGFTLYGCLVISYLFSPMTKR*LNSLSK
Trigger: CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGG...AGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGTGTGTTCCTGATACATaGCCGTCCATCTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMCVPDT*PSICIF
Trigger: GAAGATGCAGATGGACGGCAATGTATCAGGAACACA...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp GAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTTGTCATCTCGTACCTCTTCTTCTCAGTATTCTTCATaGGCAGTGGAAAATGCTTCA +
Preference number: 5 (lower is better)
Translates to: EGGEVSHFMVVLSSRTSSSQYSS*AVENAS
Trigger: TGAAGCATTTTCCACTGCCAATGAAGAATACTGAGA...AGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS TCA 90 bp AATGCAGGCAACGCAACTCTGCAGGGAAGATGCAGCTTCACTGAGTaGAAAAGTTCAGACTATCAAAGCATCATGCAAAACTCATGCAAA +
Preference number: 5 (lower is better)
Translates to: NAGNATLQGRCSFTE*KSSDYQSIMQNSCK
Trigger: TTTGCATGAGTTTTGCATGATGCTTTGATAGTCTGAACTTTTTCACTCAGTGAAGCTGCATCTTCCCTGCAGAGTTGCGTTGCCTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS-3UTR CAA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGTCTGTTGCAGCTTTaGCTCTGCCAATTCCAAGCG +
Preference number: 5 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGCLLQL*LCQFQA
Trigger: CGCTTGGAATTGGCAGAGCAAAAGCTGCAACAGACA...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp CACATCTGCAACTTACACAATCCAAAATGGCTAGAGCATCAAAGTCTAAAAATGTGCCCGCTGCAGTTCTaGATTCTTCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: HICNLHNPKWLEHQSLKMCPLQF*ILLLQL
Trigger: CAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGCA...CATTTTTAGACTTTGATGCTCTAGCCATTTTGGATTGTGTAAGTTGCAGATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TATTTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTTTAAGAGTTTGTACCTaGGAAGGCTCATCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: YFLKELSSTACHRHKFTSLRVCT*EGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAA...ACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGCTGCTCATTAAGAGTTaGTACCTTGGAAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: FLKELSSTACHRHKFTSMLLIKS*YLGRLI
Trigger: GATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAG...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGATGCCAAGACACTAGCTaGCTGGGCACGTTCCCAATC +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERCQDTS*LGTFPI
Trigger: GATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGCA...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp TTCCTGAAAGAGCTTTCTAGCACGGCCTGTCACAGACACAAATTTACAAGTATGCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: FLKELSSTACHRHKFTSMLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...CATACTTGTAAATTTGTGTCTGTGACAGGCCGTGCTAGAAAGCTCTTTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGTGCTTCTTTGCCAGTTaGTCCAGGTCGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLCFFAS*SRSALF
Trigger: GAAAAGGGCCGACCTGGACAAACTGGCAAAGAAGCA...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAAAGTCACCCGGAAGTTaGCAGGGAGAGTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERKSPGS*QGESLL
Trigger: CAGCAGAGACTCTCCCTGCAAACTTCCGGGTGACTT...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAAAAGTCACCCGGAAGTTaGCAGGGAGAGTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKKSPGS*QGESLL
Trigger: CAGCAGAGACTCTCCCTGCAAACTTCCGGGTGACTT...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000528853.1
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCTGTGTTCCTGATACATaGCCGTCCATCTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LLEIRYAYFRMIAVELGCCVPDT*PSICIF
Trigger: GAAGATGCAGATGGACGGCAATGTATCAGGAACACA...GCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGATGCCCGCTGCAGTTCTaGATTCTTCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERCPLQF*ILLLQL
Trigger: CAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGCA...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp ATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTCGACTTTCACTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: IDLKRPRLSRLPLPTRLSLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...TGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526262.5
ENST00000526369.3
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGATTCTTCTTTGGGGCTTaGTGGAGCGAGTCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERFFFGA*WSESWL
Trigger: TAGCCAGGACTCGCTCCACAAAGCCCCAAAGAAGAA...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp CAATTGCTTGAAATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCCGAATCACTCGATCATaGCTCCAAACAAGCACGTCT +
Preference number: 5 (lower is better)
Translates to: QLLEIRYAYFRMIAVELGRITRS*LQTSTS
Trigger: AGACGTGCTTGTTTGGAGCAATGATCGAGTGATTCG...GCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAATTTCAAGCAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
CDS-3UTR CAA 90 bp TCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGCGAATCACTCGATCATaGCTCCAAACAAGCACGTCT +
Preference number: 5 (lower is better)
Translates to: SNLLSVPMTKRLLNSLSKRITRS*LQTSTS
Trigger: AGACGTGCTTGTTTGGAGCAATGATCGAGTGATTCG...CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000532504.5
CDS-3UTR CAA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGTTCACGGACATCTCGTaGCAATTTTGTGTTCATTTC +
Preference number: 5 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMFTDIS*QFCVHF
Trigger: GAAATGAACACAAAATTGCAACGAGATGTCCGTGAA...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATTAGGTATGCTTATTTCAGGATGATTGCTGTAGAGCTAGGCTGCGTCCGTAAATTTCACACTTTATGGTaGTCTTGTCATCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: IRYAYFRMIAVELGCVRKFHTLW*SCHLVP
Trigger: AGGTACGAGATGACAAGACAACCATAAAGTGTGAAA...TTTACGGACGCAGCCTAGCTCTACAGCAATCATCCTGAAATAAGCATACCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRFHTLW*SCHLVP
Trigger: AGGTACGAGATGACAAGACAACCATAAAGTGTGAAA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp TGCACAATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: CTINTTPWSDTLCWLVNMFHTLW*SCHLVP
Trigger: AGGTACGAGATGACAAGACAACCATAAAGTGTGAAA...CATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTATTGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp ATGGAGCTCATTGATCTAAAACGACCAAGATTGTCTAGACTTCCACTGCCAACTTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: MELIDLKRPRLSRLPLPTFHTLW*SCHLVP
Trigger: AGGTACGAGATGACAAGACAACCATAAAGTGTGAAA...AGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATCAATGAGCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526262.5
ENST00000532504.5
ENST00000533894.5
ENST00000648755.1
CDS-3UTR CAA 90 bp ATCTTCATCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTCGAATCACTCGATCATaGCTCCAAACAAGCACGTCT +
Preference number: 5 (lower is better)
Translates to: IFIKPSISPHDQKVVKFSRITRS*LQTSTS
Trigger: AGACGTGCTTGTTTGGAGCAATGATCGAGTGATTCG...AGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGATGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526262.5
ENST00000532504.5
CDS-3UTR CAA 90 bp CACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTGTGTGTTCCTGATACATaGCCGTCCATCTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: HWIPKCSLCWIQMLHNHLCVPDT*PSICIF
Trigger: GAAGATGCAGATGGACGGCAATGTATCAGGAACACA...CAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS GCA 90 bp GATTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTaGATAATCATCTGTAGAAGTAGTGTGGGTAAACGTCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: DSTGFQNVVFVGFKC*IIICRSSVGKRPSA
Trigger: TGCAGATGGACGTTTACCCACACTACTTCTACAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528853.1
CDS-3UTR CAA 90 bp ATCATTATTAATGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTGACAGGTTTTCAAGTTTATCATaGAGGTCATGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: IIINVPDRKLLMLPTSDRFSSLS*RSCTDV
Trigger: CACATCTGTGCATGACCTCAATGATAAACTTGAAAA...CCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACATTAATAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp GCGTCCGTAAAGGATAATGCACATGGCTTCTGTCATAATTTTATAAACGTAAAACGAATCACTCGATCATaGCTCCAAACAAGCACGTCT +
Preference number: 5 (lower is better)
Translates to: ASVKDNAHGFCHNFINVKRITRS*LQTSTS
Trigger: AGACGTGCTTGTTTGGAGCAATGATCGAGTGATTCG...TTTTACGTTTATAAAATTATGACAGAAGCCATGTGCATTATCCTTTACGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
CDS-3UTR CAA 90 bp ATAAATACCACGCCATGGTCTGACACACTTTGCTGGCTTGTTAATATGCCATTTTTTTCAAGTTTATCATaGAGGTCATGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: INTTPWSDTLCWLVNMPFFSSLS*RSCTDV
Trigger: CACATCTGTGCATGACCTCAATGATAAACTTGAAAA...AAATGGCATATTAACAAGCCAGCAAAGTGTGTCAGACCATGGCGTGGTATTTAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCTAAAACGACCAAGATaGTCTAGACTTCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHLKRPR*SRLPLP
Trigger: TGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCATGCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: CCRIKHLLLEKVQLRSVMPMTKR*LNSLSK
Trigger: CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGG...CATGACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TCAAACCTTCTATCAGTCCCCATGACCAAAAGGTTGTTAAATTCTCTTTCCAAGCAGATCTGTTATGCTTaGTGTGTAAATAAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SNLLSVPMTKRLLNSLSKQICYA*CVNKLG
Trigger: TCCCAGCTTATTTACACACAAAGCATAACAGATCTG...CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGGGACTGATAGAAGGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648755.1
CDS GCA 90 bp AAAGATTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATaGTGCATAATCATCTGTAGAAGTAGTGTGGGTAAACGTCCATCT +
Preference number: 5 (lower is better)
Translates to: KDSTGFQNVVFVGFK*CIIICRSSVGKRPS
Trigger: AGATGGACGTTTACCCACACTACTTCTACAGATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528853.1
CDS-3UTR CAA 90 bp CTTCCAAAACAGTTAGAGCTTATTCTCAGTATTCTTCATTGGCAGTGGAAAATGGATTCTGAAAGCAGCTaGTCAACAGTGTCTGATAAA +
Preference number: 5 (lower is better)
Translates to: LPKQLELILSILHWQWKMDSESS*STVSDK
Trigger: TTTATCAGACACTGTTGACAAGCTGCTTTCAGAATC...CATTTTCCACTGCCAATGAAGAATACTGAGAATAAGCTCTAACTGTTTTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp TTCCACTGGATTCCAAAATGTAGTCTTTGTTGGATTCAAATGCTGCATAATCATCACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: FHWIPKCSLCWIQMLHNHHFMVV*SSRTSS
Trigger: AGAAGAGGTACGAGATGACAAGACAACCATAAAGTG...ATGATTATGCAGCATTTGAATCCAACAAAGACTACATTTTGGAATCCAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGACACTTTATGGTTGTCTaGTCATCTCGTACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERHFMVV*SSRTSS
Trigger: AGAAGAGGTACGAGATGACAAGACAACCATAAAGTG...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp TTCATGCTGCAGAATAAAGCATCTCTTGCTAGAAAAAGTACAGTTAAGGTCAGTCCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: FMLQNKASLARKSTVKVSPMTKR*LNSLSK
Trigger: CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGG...ACTGACCTTAACTGTACTTTTTCTAGCAAGAGATGCTTTATTCTGCAGCATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253925.12
ENST00000526262.5
ENST00000532504.5
ENST00000644155.1
ENST00000648755.1
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGATTCACGGACATCTCGTaGCAATTTTGTGTTCATTTC +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERFTDIS*QFCVHF
Trigger: GAAATGAACACAAAATTGCAACGAGATGTCCGTGAA...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGAGATTCTGAAAGCAGCTaGTCAACAGTGTCTGATAAA +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERDSESS*STVSDK
Trigger: TTTATCAGACACTGTTGACAAGCTGCTTTCAGAATC...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS-3UTR CAA 90 bp AGCAGTAAATTATGTGGTTTGGAAGCTACTACTACACTACTATTTCCTGAAAGACCCATGACCAAAAGGTaGTTAAATTCTCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSKLCGLEATTTLLFPERPMTKR*LNSLSK
Trigger: CTTGGAAAGAGAATTTAACAACCTTTTGGTCATGGG...TCTTTCAGGAAATAGTAGTGTAGTAGTAGCTTCCAAACCACATAATTTACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS CCA 72 bp GGCGGCTCGCGGGCGGCTGCTCGCTCCGGGAGAGCTTaGGAGCCGACGAAAGCAGCCCGCGGCCGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: GGSRAAARSGRA*EPTKAARGRRP
Trigger: CGGACGCCGGCCGCGGGCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCGAGCAGCCGCCCGCGAGCCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000389547.7
ENST00000532504.5
CDS CAA 72 bp CGGCGGCTCGCGGGCGGCTGCTCGCTCCGGGAGAGCTaGGGAGCCGACGAAAGCAGCCCGCGGCCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: RRLAGGCSLRES*GADESSPRPAS
Trigger: GGACGCCGGCCGCGGGCTGCTTTCGTCGGCTCCCAAGCTCTCCCGGAGCGAGCAGCCGCCCGCGAGCCGCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253925.12
ENST00000389547.7
ENST00000532504.5
CDS GCA 72 bp GTCATCTCGTACCTTGGAAGGCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGGGCGCCGCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: VISYLGRLISQG*QPAFLWAPQHC
Trigger: GCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAGCCTTCCAAGGTACGAGATGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530798.5
CDS GCA 72 bp TTTGTACCTTGCCTTGGAAGGCTCATCTCGCAGGGCTaGCAGCCGGCCTTTCTGTGGGCGCCGCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: FVPCLGRLISQG*QPAFLWAPQHC
Trigger: GCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTGGCAGCCCTGCGAGATGAGCCTTCCAAGGCAAGGTACAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526262.5
CDS CCA 72 bp CTTAAGTGGAAAACGCGCTGGGAGGAGTGCAGGCTGTaGGGCGTGACTAACCGTTTGCGGCGTGGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: LKWKTRWEECRL*GVTNRLRRGCE
Trigger: CTCGCAGCCACGCCGCAAACGGTTAGTCACGCCCCACAGCCTGCACTCCTCCCAGCGCGTTTTCCACTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CAA 72 bp TGGGAGGAGTGCAGGCTGTGGGGCGTGACTAACCGTTaGCGGCGTGGCTGCGAGCGTTTCCATCTCTTCGTG +
Preference number: 6 (lower is better)
Translates to: WEECRLWGVTNR*RRGCERFHLFV
Trigger: CACGAAGAGATGGAAACGCTCGCAGCCACGCCGCAAACGGTTAGTCACGCCCCACAGCCTGCACTCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS TCA 72 bp ATTGGAGGGCTTTCTCGCAGATGTTCCGTGACGGCCTaGAAGGCTGAAGGCAGGCCACAGGGCAGAGGGGGT +
Preference number: 6 (lower is better)
Translates to: IGGLSRRCSVTA*KAEGRPQGRGG
Trigger: ACCCCCTCTGCCCTGTGGCCTGCCTTCAGCCTTTCAGGCCGTCACGGAACATCTGCGAGAAAGCCCTCCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS TCA 72 bp TGTAGGAGTCTGTGTGGCCGTCTGCCATGGGGAACCTaGAATCTGGGACACTGCCCAAGTGGGGTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: CRSLCGRLPWGT*NLGHCPSGVGS
Trigger: AGAGCCGACCCCACTTGGGCAGTGTCCCAGATTTCAGGTTCCCCATGGCAGACGGCCACACAGACTCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526369.3
ENST00000532504.5
CDS CAA 90 bp AGTCCCTGCCCGGGCGGGTCTCCTTTCACCCACGCCTCCACTGTTTaGCTCCCAACCAGAGTAAAAGATCCTGGTGAGCCACCTCCATTC +
Preference number: 6 (lower is better)
Translates to: SPCPGGSPFTHASTV*LPTRVKDPGEPPPF
Trigger: GAATGGAGGTGGCTCACCAGGATCTTTTACTCTGGTTGGGAGCAAAACAGTGGAGGCGTGGGTGAAAGGAGACCCGCCCGGGCAGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528284.1
CDS TCA 72 bp CTTTGGCTATTGGAGGGCTTTCTCGCAGATGTTCCGTaGCGGCCTGAAAGGCTGAAGGCAGGCCACAGGGCA +
Preference number: 6 (lower is better)
Translates to: LWLLEGFLADVP*RPERLKAGHRA
Trigger: TGCCCTGTGGCCTGCCTTCAGCCTTTCAGGCCGTCACGGAACATCTGCGAGAAAGCCCTCCAATAGCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS GCA 72 bp CCCTGCCAGCGGGACTATTCTATGGCAGTTCCAACGTaGTCCCCGTTACTAAGGCCACCAGCTGTCCCTTTG +
Preference number: 6 (lower is better)
Translates to: PCQRDYSMAVPT*SPLLRPPAVPL
Trigger: CAAAGGGACAGCTGGTGGCCTTAGTAACGGGGAGCACGTTGGAACTGCCATAGAATAGTCCCGCTGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528284.1
CDS CCA 72 bp CACAGGGCAGAGGGGGTCACTGCTAAGCAGTGTCGATaGCTCTGTGCAGCCATCAGAACCAGACACGAGACA +
Preference number: 6 (lower is better)
Translates to: HRAEGVTAKQCR*LCAAIRTRHET
Trigger: TGTCTCGTGTCTGGTTCTGATGGCTGCACAGAGCCATCGACACTGCTTAGCAGTGACCCCCTCTGCCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CCA 72 bp GCAAAGAACCCAGACGGTCTTAAGTGGAAAACGCGCTaGGAGGAGTGCAGGCTGTGGGGCGTGACTAACCGT +
Preference number: 6 (lower is better)
Translates to: AKNPDGLKWKTR*EECRLWGVTNR
Trigger: ACGGTTAGTCACGCCCCACAGCCTGCACTCCTCCCAGCGCGTTTTCCACTTAAGACCGTCTGGGTTCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CAA 72 bp CCGGGCGGGTCTCCTTTCACCCACGCCTCCACTGTTTaGCTCCCAACCAGAGTAAAAGATCCTGGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: PGGSPFTHASTV*LPTRVKDPGEP
Trigger: TGGCTCACCAGGATCTTTTACTCTGGTTGGGAGCAAAACAGTGGAGGCGTGGGTGAAAGGAGACCCGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528284.1
CDS TCA 72 bp GCATTCCCTGTTTCCAAAGAATGCAGGGGTTGTCTCTaGACGTACCGTTCTAGATGTGGGCGGGGCAGACGG +
Preference number: 6 (lower is better)
Translates to: AFPVSKECRGCL*TYRSRCGRGRR
Trigger: CCGTCTGCCCCGCCCACATCTAGAACGGTACGTTCAGAGACAACCCCTGCATTCTTTGGAAACAGGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532793.1
CDS GCA 72 bp ATTCTGTCTTCCTCTCCCCACTTCTCTAGACCTTGCTaGAGGCCAGCTTTCAGCGCTTACTTCCCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: ILSSSPHFSRPC*RPAFSAYFPAS
Trigger: GCTGGCAGGGAAGTAAGCGCTGAAAGCTGGCCTGCAGCAAGGTCTAGAGAAGTGGGGAGAGGAAGACAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528284.1
CDS CAA 90 bp GAAGGGCTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCTCTTCTCTGGAAGGTGGCAACTGAG +
Preference number: 6 (lower is better)
Translates to: EGLSGRKAGRFHTLW*SCHLVPLLWKVATE
Trigger: CTCAGTTGCCACCTTCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527612.1
ENST00000528750.1
CDS CCA 72 bp GACACTGCCCAAGTGGGGTCGGCTCTTAGTCTCATGTaGTCTAGTTCAGCCCTCAGTGCTTCAATGTTTAGG +
Preference number: 6 (lower is better)
Translates to: DTAQVGSALSLM*SSSALSASMFR
Trigger: CCTAAACATTGAAGCACTGAGGGCTGAACTAGACCACATGAGACTAAGAGCCGACCCCACTTGGGCAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526369.3
ENST00000532504.5
CDS CCA 72 bp GCAAGGAGCAGACTCTCTCCGTGCCAAGCATATTCATaGAAGGAGAAAGGGCCACACAGTCAGTCACATGGA +
Preference number: 6 (lower is better)
Translates to: ARSRLSPCQAYS*KEKGPHSQSHG
Trigger: TCCATGTGACTGACTGTGTGGCCCTTTCTCCTTCCATGAATATGCTTGGCACGGAGAGAGTCTGCTCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CCA 72 bp CTCTCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATaGTTGTCTTGTCATCTCGTACCTTGGAAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: LSGRKAGRFHTL*LSCHLVPWKAH
Trigger: ATGAGCCTTCCAAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530798.5
CDS CAA 72 bp GAGGAAGGCGGGGAGGTTTCACACTTTATGGTTGTCTaGTCATCTCGTACCTTGGAAGGCTCATCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: EEGGEVSHFMVV*SSRTLEGSSRR
Trigger: CCTGCGAGATGAGCCTTCCAAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530798.5
CDS CAA 72 bp TCGGGGAGGAAGGCGGGGAGGTTTCACACTTTATGGTaGTCTTGTCATCTCGTACCTTGGAAGGCTCATCTC +
Preference number: 6 (lower is better)
Translates to: SGRKAGRFHTLW*SCHLVPWKAHL
Trigger: GAGATGAGCCTTCCAAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530798.5
CDS TCA 72 bp CTCAGCACCTTCATTTTCAGCAAGGCCACTGTCATGTaGAACAACCAGGGAAGAGCTCAGACACTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: LSTFIFSKATVM*NNQGRAQTLLL
Trigger: CAGGAGCAGTGTCTGAGCTCTTCCCTGGTTGTTTCACATGACAGTGGCCTTGCTGAAAATGAAGGTGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS GCA 72 bp GCCAAGACACTAGCTTGCTGGGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACCCCAAACGCTGAGTGT +
Preference number: 6 (lower is better)
Translates to: AKTLACWARSQS*SLRVCTPNAEC
Trigger: ACACTCAGCGTTTGGGGTACAAACTCTTAATGAGCAGGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526347.5
ENST00000530294.5
CDS GCA 72 bp GCCAAGACACTAGCTTGCTGGGCACGTTCCCAATCCTaGTCATTAAGAGTTTGTACCTTGCCTTGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: AKTLACWARSQS*SLRVCTLPWKA
Trigger: AGCCTTCCAAGGCAAGGTACAAACTCTTAATGAGCAGGATTGGGAACGTGCCCAGCAAGCTAGTGTCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526262.5
CDS TCA 72 bp TGTTCCAGACAGAAAGCTGCTCATGCTCCCAACAAGTaGCAGGTTAGTGTGACCCATCACATACCGTCCATC +
Preference number: 6 (lower is better)
Translates to: CSRQKAAHAPNK*QVSVTHHIPSI
Trigger: GATGGACGGTATGTGATGGGTCACACTAACCTGTCACTTGTTGGGAGCATGAGCAGCTTTCTGTCTGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS GCA 72 bp CTCTTTGCCTTGCCTGAAAGGGTCCAGCACATCATGTaGCATACGGAGTATCGCATACTTCCTCTTGGGAAA +
Preference number: 6 (lower is better)
Translates to: LFALPERVQHIM*HTEYRILPLGK
Trigger: TTTCCCAAGAGGAAGTATGCGATACTCCGTATGGCACATGATGTGCTGGACCCTTTCAGGCAAGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532443.1
CDS CCA 72 bp CATGCTGTGAAGAATCGCTATAGCATGGGGTGGAACTaGGAGGGGAGGTGGATGAGTAAACTACTGACTGAT +
Preference number: 6 (lower is better)
Translates to: HAVKNRYSMGWN*EGRWMSKLLTD
Trigger: ATCAGTCAGTAGTTTACTCATCCACCTCCCCTCCCAGTTCCACCCCATGCTATAGCGATTCTTCACAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528750.1
ENST00000530390.5
CDS CAA 72 bp TTGCTGGGCACGTTCCCAATCCTGCTCATTAAGAGTTaGTACCTTAAAACACCACGGCAGAAACCAAGGCCC +
Preference number: 6 (lower is better)
Translates to: LLGTFPILLIKS*YLKTPRQKPRP
Trigger: GGGCCTTGGTTTCTGCCGTGGTGTTTTAAGGTACAAACTCTTAATGAGCAGGATTGGGAACGTGCCCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528284.1
CDS TCA 72 bp AAGCTGCTCATGCTCCCAACAAGTGACAGGTTAGTGTaGCCCATCACATACCGTCCATCTGCATCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: KLLMLPTSDRLV*PITYRPSASSL
Trigger: CAAAGAAGATGCAGATGGACGGTATGTGATGGGTCACACTAACCTGTCACTTGTTGGGAGCATGAGCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS GCA 72 bp GTATTGGTGAGCTCGGTAATGCAGGCAACGCAACTCTaGAGGGAAGATGCAGCTTCACTGAGTGAAAAAGTT +
Preference number: 6 (lower is better)
Translates to: VLVSSVMQATQL*REDAASLSEKV
Trigger: AACTTTTTCACTCAGTGAAGCTGCATCTTCCCTGCAGAGTTGCGTTGCCTGCATTACCGAGCTCACCAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CCA 72 bp TGTGACCCATCACATACCGTCCATCTGCATCTTCTTTaGCTGCATAGAGGGGGAAGACATAGAAGAAGTCAC +
Preference number: 6 (lower is better)
Translates to: CDPSHTVHLHLL*LHRGGRHRRSH
Trigger: GTGACTTCTTCTATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATGGACGGTATGTGATGGGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389547.7
CDS TCA 72 bp AAGTGCTGCGAACTCCTGGTAAGGATCTGTAAGTGCTaGAACCTCTTCAGAGATCGAACGCAGCATTCAGAA +
Preference number: 6 (lower is better)
Translates to: KCCELLVRICKC*NLFRDRTQHSE
Trigger: TTCTGAATGCTGCGTTCGATCTCTGAAGAGGTTTCAGCACTTACAGATCCTTACCAGGAGTTCGCAGCACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648755.1
ENST00000672873.1
ENST00000673366.1
CDS CAA 90 bp GTGCTCCTTGGAGAAATGTGTGAGGCTCTTCATTGCAACAAGAATTaGTTTTCTCCTGAGGAGACTAAAAGCAGAGACTGGGAATCCAGC +
Preference number: 6 (lower is better)
Translates to: VLLGEMCEALHCNKN*FSPEETKSRDWESS
Trigger: GCTGGATTCCCAGTCTCTGCTTTTAGTCTCCTCAGGAGAAAACAAATTCTTGTTGCAATGAAGAGCCTCACACATTTCTCCAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS TCA 72 bp AGGCAACGCAACTCTGCAGGGAAGATGCAGCTTCACTaGGTGAAAAAGTTCAGACTATCAAAGCATCATGCA +
Preference number: 6 (lower is better)
Translates to: RQRNSAGKMQLH*VKKFRLSKHHA
Trigger: TGCATGATGCTTTGATAGTCTGAACTTTTTCACTCAGTGAAGCTGCATCTTCCCTGCAGAGTTGCGTTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS GCA 72 bp ATCAGGAGAAGAGCACACGATGACGAGAGCTTTAGATaGCATGCTTACCCGAGGTATGTGAAATATCAAGAG +
Preference number: 6 (lower is better)
Translates to: IRRRAHDDESFR*HAYPRYVKYQE
Trigger: CTCTTGATATTTCACATACCTCGGGTAAGCATGGCATCTAAAGCTCTCGTCATCGTGTGCTCTTCTCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS TCA 72 bp AACGCAACTCTGCAGGGAAGATGCAGCTTCACTGAGTaGAAAAGTTCAGACTATCAAAGCATCATGCAAAAC +
Preference number: 6 (lower is better)
Translates to: NATLQGRCSFTE*KSSDYQSIMQN
Trigger: GTTTTGCATGATGCTTTGATAGTCTGAACTTTTTCACTCAGTGAAGCTGCATCTTCCCTGCAGAGTTGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CAA 72 bp GATGGGCAGTCTCATTATGCTCAGATCTGTTATGCTTaGTGTGTAAATAAGCTGGGAAAACATACACAGGGC +
Preference number: 6 (lower is better)
Translates to: DGQSHYAQICYA*CVNKLGKHTQG
Trigger: GCCCTGTGTATGTTTTCCCAGCTTATTTACACACAAAGCATAACAGATCTGAGCATAATGAGACTGCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532024.1
ENST00000648755.1
CDS CAA 72 bp GGAGAAATGTGTGAGGCTCTTCATTGCAACAAGAATTaGTTTTCTCCTGAGGAGACTAAAAGCAGAGACTGG +
Preference number: 6 (lower is better)
Translates to: GEMCEALHCNKN*FSPEETKSRDW
Trigger: CCAGTCTCTGCTTTTAGTCTCCTCAGGAGAAAACAAATTCTTGTTGCAATGAAGAGCCTCACACATTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CAA 72 bp GCCAGTGTAAAAAGTCTCAACTTTATAAATCTGGAGTaGGCCTGCCCTTATCTCCCAATAACCATTCTTGTT +
Preference number: 6 (lower is better)
Translates to: ASVKSLNFINLE*ACPYLPITILV
Trigger: AACAAGAATGGTTATTGGGAGATAAGGGCAGGCCAACTCCAGATTTATAAAGTTGAGACTTTTTACACTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CAA 90 bp GGGAATCCAGCCAGTGTAAAAAGTCTCAACTTTATAAATCTGGAGTaGGCCTGCCCTTATCTCCCAATAACCATTCTTGTTTTTATTAAC +
Preference number: 6 (lower is better)
Translates to: GNPASVKSLNFINLE*ACPYLPITILVFIN
Trigger: GTTAATAAAAACAAGAATGGTTATTGGGAGATAAGGGCAGGCCAACTCCAGATTTATAAAGTTGAGACTTTTTACACTGGCTGGATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530548.5
CDS CAA 72 bp ACATCATGTGCCATACGGAGTATCGCATACTTCCTCTaGGGAAAGAAACAATATCCTTCTTTGTGCTTATTT +
Preference number: 6 (lower is better)
Translates to: TSCAIRSIAYFL*GKKQYPSLCLF
Trigger: AAATAAGCACAAAGAAGGATATTGTTTCTTTCCCAAGAGGAAGTATGCGATACTCCGTATGGCACATGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532443.1
CDS GCA 72 bp GTAAAAAGTCTCAACTTTATAAATCTGGAGTTGGCCTaGCCTTATCTCCCAATAACCATTCTTGTTTTTATT +
Preference number: 6 (lower is better)
Translates to: VKSLNFINLELA*PYLPITILVFI
Trigger: AATAAAAACAAGAATGGTTATTGGGAGATAAGGGCAGGCCAACTCCAGATTTATAAAGTTGAGACTTTTTAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530548.5