Pregenerated sensors for PPDPF (Homo sapiens)
Ensembl gene IDs: ENSG00000125534Ensembl transcript IDs: ENST00000370179.8, ENST00000464438.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGGGGGAGGGGCTCTGGTaGACTAGCGCCTCCGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TSGHTAQAHTIGATGCLEGEGLW*TSASAG Trigger: GCCTGCGGAGGCGCTAGTCCACCAGAGCCCCTCCCC...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGGGCGGGGAGGGGCTCTaGTGGACTAGCGCCTCCGCA | + |
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Preference number: 2 (lower is better) Translates to: TSGHTAQAHTIGATGCLEGGEGL*WTSASA Trigger: TGCGGAGGCGCTAGTCCACCAGAGCCCCTCCCCGCC...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR CCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTGCGAGGGATGCGGAGTaGGGAGAGGGGCGGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVARDAE*GEGRGG Trigger: CCCTCCCCGCCCCTCTCCCCACTCCGCATCCCTCGC...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTAGGAAAGCTAGCGAGTaGTGGGGCCGGGCGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVRKASE*WGRAVE Trigger: CTCTACCGCCCGGCCCCAGCACTCGCTAGCTTTCCT...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR CCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTAAAGCTAGCGAGTGCTaGGGCCGGGCGGTAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVKASEC*GRAVES Trigger: GCTCTCTACCGCCCGGCCCCAGCACTCGCTAGCTTT...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGCGAAGGTCTGCTTGCTaGAGCCGCCTAGTTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: TSGHTAQAHTIGATGCLERRSAC*SRLVYR Trigger: CCTGTAAACTAGGCGGCTGCAGCAAGCAGACCTTCG...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGTTGATGCGAAGGTCTaGTTGCTGCAGCCGCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: WNLGPHSSGTHHRGYWLLVDAKV*LLQPPS Trigger: ACTAGGCGGCTGCAGCAAGCAGACCTTCGCATCAAC...AAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR GCA 90 bp | AACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGATTATTTTCCGCTTGGTaGCAGGTGCACAGTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: NLGPHSSGTHHRGYWLLGLFSAW*QVHSSR Trigger: CCTGGAACTGTGCACCTGGCACCAAGCGGAAAATAA...TCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTCTGGTTTTTGGTGTCTaGTGTGTTGATGCGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: WNLGPHSSGTHHRGYWLLLVFGV*CVDAKV Trigger: GACCTTCGCATCAACACAGCAGACACCAAAAACCAG...AAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTATTATGCGAAGGTCTGCTTaGTGCAGCCGCCTAGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: GHTAQAHTIGATGCLEFIMRRSA*CSRLVY Trigger: GTAAACTAGGCGGCTGCAGCAAGCAGACCTTCGCAT...AATAAACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR CCA 72 bp | TGCACAGTTCCAGGTGTCAGGAAAGCTAGCGAGTGCTaGGGCCGGGCGGTAGAGAGCGGGGCTCTCACTGGT | + |
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Preference number: 3 (lower is better) Translates to: CTVPGVRKASEC*GRAVESGALTG Trigger: ACCAGTGAGAGCCCCGCTCTCTACCGCCCGGCCCCAGCACTCGCTAGCTTTCCTGACACCTGGAACTGTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGATGCGAAGGTCTGCTaGCTGCAGCCGCCTAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: WNLGPHSSGTHHRGYWLLDAKVC*LQPPSL Trigger: TAAACTAGGCGGCTGCAGCAAGCAGACCTTCGCATC...AAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGCTGGCTGGTGGGATCTaGGCGGCGACCCCTCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TSGHTAQAHTIGATGCLELAGGI*AATPRG Trigger: CCCGCGAGGGGTCGCCGCCCAGATCCCACCAGCCAG...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGGCCCAGCGCTGGCTGTaGTGGACTGACCGCCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TSGHTAQAHTIGATGCLEAQRWL*WTDRRA Trigger: AGCCCGGCGGTCAGTCCAGCACAGCCAGCGCTGGGC...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGGGCCACAGGCGGTCATaGTGCTGGAGGCCTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TSGHTAQAHTIGATGCLEGHRRS*CWRPGE Trigger: CTCCCCAGGCCTCCAGCAGCATGACCGCCTGTGGCC...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | AACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGACCACGAGCGAGCCGCTaGAGGGGATGGCCGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: NLGPHSSGTHHRGYWLLGPRASR*RGWPPC Trigger: GCATGGCGGCCATCCCCTCCAGCGGCTCGCTCGTGG...TCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTCAGCGCTGGCTGTGCTaGACTGACCGCCGGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVQRWLC*TDRRAA Trigger: AGCAGCCCGGCGGTCAGTCCAGCACAGCCAGCGCTG...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGAGGAAAGCTAGCGAGTaGTGGGGCCGGGCGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: TSGHTAQAHTIGATGCLERKASE*WGRAVE Trigger: CTCTACCGCCCGGCCCCAGCACTCGCTAGCTTTCCT...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | GGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTATGGGGAGGGGCTCTGGTaGACTAGCGCCTCCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GPHSSGTHHRGYWLLGVYGEGLW*TSASAG Trigger: GCCTGCGGAGGCGCTAGTCCACCAGAGCCCCTCCCC...ATAAACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTCACAGGCGGTCATGCTaGTGGAGGCCTGGGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVHRRSC*WRPGEV Trigger: AACCTCCCCAGGCCTCCAGCAGCATGACCGCCTGTG...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGAGGGGATGGCCGCCATaGTTTAGCTTGCTGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TSGHTAQAHTIGATGCLERGWPP*FSLLAG Trigger: ACCAGCCAGCAAGCTAAAGCATGGCGGCCATCCCCT...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | AACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGATGGGGAGGTTCCGAGTaGTCTGCGGACTCCAACACC | + |
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Preference number: 4 (lower is better) Translates to: NLGPHSSGTHHRGYWLLGWGGSE*SADSNT Trigger: GGTGTTGGAGTCCGCAGAGCACTCGGAACCTCCCCA...TCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | CACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTATTTTCGGCGGGGAGGGGCTCTaGTGGACTAGCGCCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: HTAQAHTIGATGCLEFIFGGEGL*WTSASA Trigger: TGCGGAGGCGCTAGTCCACCAGAGCCCCTCCCCGCC...GAAAATAAACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTCGAAGGTCTGCTTGCTaGAGCCGCCTAGTTTACAGG | + |
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Preference number: 4 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVRRSAC*SRLVYR Trigger: CCTGTAAACTAGGCGGCTGCAGCAAGCAGACCTTCG...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | GGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTATATGCTGCTGGAGGCCTaGGGAGGTTCCGAGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GPHSSGTHHRGYWLLGVYMLLEA*GGSECS Trigger: AGAGCACTCGGAACCTCCCCAGGCCTCCAGCAGCAT...ATAAACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTATGCGAAGGTCTGCTTaGTGCAGCCGCCTAGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVMRRSA*CSRLVY Trigger: GTAAACTAGGCGGCTGCAGCAAGCAGACCTTCGCAT...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | GGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTATTGGCACTCGGTACTGCTaGAGGAGCTGTTGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GHTAQAHTIGATGCLEFIGTRYC*RSCCWK Trigger: CTTCCAGCAACAGCTCCTGCAGCAGTACCGAGTGCC...AATAAACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | CACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTATTTTCCGGGGCACTCGGTACTaGTGCAGGAGCTGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HTAQAHTIGATGCLEFIFRGTRY*CRSCCW Trigger: CCAGCAACAGCTCCTGCAGCAGTACCGAGTGCCCCG...GAAAATAAACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGCTGGTTTTTGGTGTCTaGTGTGTTGATGCGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TSGHTAQAHTIGATGCLELVFGV*CVDAKV Trigger: GACCTTCGCATCAACACAGCAGACACCAAAAACCAG...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTTATTTTCCGCTTGGTaGCAGGTGCACAGTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVLFSAW*QVHSSR Trigger: CCTGGAACTGTGCACCTGGCACCAAGCGGAAAATAA...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR GCA 90 bp | CTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTATCGGGGCTACTGGCTaGTTGGAGTTTATTTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: LGPHSSGTHHRGYWLLGVIGATG*LEFIFR Trigger: GCGGAAAATAAACTCCAAGCAGCCAGTAGCCCCGAT...AACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | GGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTATTCATGCTTTAGCTTGCTaGCTGGTGGGATCTGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GHTAQAHTIGATGCLEFIHALAC*LVGSGR Trigger: CCGCCCAGATCCCACCAGCCAGCAAGCTAAAGCATG...AATAAACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | CACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGTTTATTTTCAAAGCTAGCGAGTGCTaGGGCCGGGCGGTAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HTAQAHTIGATGCLEFIFKASEC*GRAVES Trigger: GCTCTCTACCGCCCGGCCCCAGCACTCGCTAGCTTT...GAAAATAAACTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CCA 90 bp | AACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGACACCATCGGGGCTACTaGCTGCTTGGAGTTTATTTT | + |
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Preference number: 4 (lower is better) Translates to: NLGPHSSGTHHRGYWLLGHHRGY*LLGVYF Trigger: AAAATAAACTCCAAGCAGCCAGTAGCCCCGATGGTG...TCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS-3UTR CAA 90 bp | ACCTCGGGCCACACAGCTCAGGCACACACCATCGGGGCTACTGGCTGCTTGGAGGATGCGAAGGTCTGCTaGCTGCAGCCGCCTAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: TSGHTAQAHTIGATGCLEDAKVC*LQPPSL Trigger: TAAACTAGGCGGCTGCAGCAAGCAGACCTTCGCATC...CTCCAAGCAGCCAGTAGCCCCGATGGTGTGTGCCTGAGCTGTGTGGCCCGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370179.8 |
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| CDS GCA 72 bp | CCACCGGCCTTCAGGCCGAGCGCTGGTTCCGCAGCCTaGACGGGGCCGGCACTGGCGCCAGCAGAGCATCCG | + |
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Preference number: 6 (lower is better) Translates to: PPAFRPSAGSAA*TGPALAPAEHP Trigger: CGGATGCTCTGCTGGCGCCAGTGCCGGCCCCGTGCAGGCTGCGGAACCAGCGCTCGGCCTGAAGGCCGGTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464438.1 |
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