Pregenerated sensors for PPCS (Homo sapiens)
Ensembl gene IDs: ENSG00000127125Ensembl transcript IDs: ENST00000372556.3, ENST00000372560.3, ENST00000372561.4, ENST00000372562.1, ENST00000471420.1, ENST00000472013.1, ENST00000482168.1
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTATGCTACTTGTGCACTCCAAACCCAAAACGTAGGACAGCAAGAGAAGTATTGGATCCTCACAATAAATaGCATTACTTTGCAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LCYLCTPNPKRRTAREVLDPHNK*HYFAER Trigger: TCTCTCTGCAAAGTAATGCCATTTATTGTGAGGATC...CAATACTTCTCTTGCTGTCCTACGTTTTGGGTTTGGAGTGCACAAGTAGCATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR-3UTR TCA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATGCTGTGTGTCGAGACTaGAGATTATCCACTATCTTC | + |
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Preference number: 2 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHAVCRD*RLSTIF Trigger: GAAGATAGTGGATAATCTTCAGTCTCGACACACAGC...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372556.3 |
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| 3UTR CAA 90 bp | AGTGAGTGTGAATCAAATGCTAGGCACCAGACTGATGCTTTCTTTTaGCTATTTCATTTGATCCTCACAATAAATGGCATTACTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SECESNARHQTDAFF*LFHLILTINGITLQ Trigger: CTGCAAAGTAATGCCATTTATTGTGAGGATCAAATGAAATAGCAAAAAGAAAGCATCAGTCTGGTGCCTAGCATTTGATTCACACTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR CAA 90 bp | TCAAATGCTAGGCACCAGACTGATGCTTTCTTTTTGCTATTTCATTaGATCCTCACAATAAATGGCATTACTTTGCAGAGAGATTATCCT | + |
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Preference number: 2 (lower is better) Translates to: SNARHQTDAFFLLFH*ILTINGITLQRDYP Trigger: AGGATAATCTCTCTGCAAAGTAATGCCATTTATTGTGAGGATCAAATGAAATAGCAAAAAGAAAGCATCAGTCTGGTGCCTAGCATTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTGAGTGTGAATCAAATGCTAGGCACCAGACTGATGCTTTCTTTTTGCTAGAAGCAAAAAGTAAATaGAGTGAAAAGCTCACCATT | + |
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Preference number: 2 (lower is better) Translates to: FSECESNARHQTDAFFLLEAKSK*SEKLTI Trigger: AATGGTGAGCTTTTCACTGCATTTACTTTTTGCTTC...TAGCAAAAAGAAAGCATCAGTCTGGTGCCTAGCATTTGATTCACACTCACTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR-3UTR CCA 90 bp | TTACTTTGCAGAGAGATTATCCTCATTTTATGCATGTGGACACTGAGATTAAGTCATTGTGTCAGCTTTTaGACACACACTTTATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LLCREIILILCMWTLRLSHCVSF*THTLLH Trigger: GTGCAATAAAGTGTGTGTCCAAAAGCTGACACAATG...ACTTAATCTCAGTGTCCACATGCATAAAATGAGGATAATCTCTCTGCAAAGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR-3UTR CCA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATCTGATAGCAATAACTTaGTTTCCGAGTCTTTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHLIAIT*FPSLWL Trigger: TAACCAAAGACTCGGAAACCAAGTTATTGCTATCAG...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372556.3 |
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| 3UTR-3UTR TCA 90 bp | TTACTTTGCAGAGAGATTATCCTCATTTTATGCATGTGGACACTGAGATTAAGTTACCCAAACATGAGGTaGATCTACAATAAGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LLCREIILILCMWTLRLSYPNMR*IYNKKQ Trigger: TTGCTTCTTATTGTAGATTCACCTCATGTTTGGGTA...ACTTAATCTCAGTGTCCACATGCATAAAATGAGGATAATCTCTCTGCAAAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR GCA 72 bp | GGGAGGGCGGTGTCTTATTCATCTCTGTATCCCCTGTaGCTAGCGAATACAGATGCAGAAAGGCCATCTCCA | + |
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Preference number: 3 (lower is better) Translates to: GRAVSYSSLYPL*LANTDAERPSP Trigger: TGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAGAGATGAATAAGACACCGCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| 3UTR-3UTR CAA 90 bp | ACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGAAAACATCCTTTCCATaGTGTCAGCTTTTGGACACA | + |
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Preference number: 3 (lower is better) Translates to: TLPHCNASLRTEITKWPLKTSFP*CQLLDT Trigger: TGTGTCCAAAAGCTGACACAATGGAAAGGATGTTTT...CAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR TCA 72 bp | GTTTATAAAGCTAATAGGTGGCACAGCTGGCTAAGTTaGCTTCTAGCCCATACTCTACCACACTGTAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: VYKANRWHSWLS*LLAHTLPHCNA Trigger: TGCATTACAGTGTGGTAGAGTATGGGCTAGAAGTCAACTTAGCCAGCTGTGCCACCTATTAGCTTTATAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR-3UTR CAA 90 bp | AAGCTCACCATTCTACAATCTATCTTCAGGGAGGTATCCTTCTTTCCTACTACTCCATTGTGTCAGCTTTaGGACACACACTTTATTGCA | + |
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Preference number: 3 (lower is better) Translates to: KLTILQSIFREVSFFPTTPLCQL*DTHFIA Trigger: TGCAATAAAGTGTGTGTCCAAAAGCTGACACAATGG...AGTAGTAGGAAAGAAGGATACCTCCCTGAAGATAGATTGTAGAATGGTGAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR-3UTR CAA 90 bp | AAACAAGATATGTTTATTCATCTTTTTAATCCTCATGGCTCAGCACAGGGCCTGCCATTGTGTCAGCTTTaGGACACACACTTTATTGCA | + |
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Preference number: 3 (lower is better) Translates to: KQDMFIHLFNPHGSAQGLPLCQL*DTHFIA Trigger: TGCAATAAAGTGTGTGTCCAAAAGCTGACACAATGG...CAGGCCCTGTGCTGAGCCATGAGGATTAAAAAGATGAATAAACATATCTTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372556.3 ENST00000372561.4 |
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| 3UTR-3UTR CAA 90 bp | AAACAAGATATGTTTATTCATCTTTTTAATCCTCATGGCTCAGCACAGGGCCTGTCTGATAGCAATAACTaGGTTTCCGAGTCTTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: KQDMFIHLFNPHGSAQGLSDSNN*VSESLV Trigger: AACCAAAGACTCGGAAACCAAGTTATTGCTATCAGA...CAGGCCCTGTGCTGAGCCATGAGGATTAAAAAGATGAATAAACATATCTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372556.3 |
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| 3UTR-3UTR CAA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATTTGGTTTCCGAGTCTTaGGTTACAATAAACACAAAG | + |
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Preference number: 3 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHLVSES*VTINTK Trigger: CTTTGTGTTTATTGTAACCAAAGACTCGGAAACCAA...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372556.3 |
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| CDS-3UTR CCA 90 bp | GTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGCCTGGTCCCAGGTGCAGCACCGGGAGGCTaGGGGAACTCGGCTACCGGA | + |
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Preference number: 4 (lower is better) Translates to: VMHPSGQRSPSGPCLVPGAAPGG*GNSATG Trigger: TCCGGTAGCCGAGTTCCCCCAGCCTCCCGGTGCTGC...ACCTGGGACCAGGCAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | GTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGCCTGGTCCCAGGTCAAGCCCGAAAGGGCTaGGCCCGAAGGCCGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VMHPSGQRSPSGPCLVPGQARKG*ARRPQS Trigger: GCTCTGCGGCCTTCGGGCCCAGCCCTTTCGGGCTTG...ACCTGGGACCAGGCAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR TCA 90 bp | TGTGAGGTCCATGAGGGAGGGCGGTGTCTTATTCATCTCTGTATCCCCTGTGCCCGCGCCGCCCGCTGCTaGAGTTGTCCAGGAAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: CEVHEGGRCLIHLCIPCARAARC*SCPGSA Trigger: TGCGCTTCCTGGACAACTTCAGCAGCGGGCGGCGCG...GGCACAGGGGATACAGAGATGAATAAGACACCGCCCTCCCTCATGGACCTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR CCA 90 bp | TGTGAGGTCCATGAGGGAGGGCGGTGTCTTATTCATCTCTGTATCCCCTGTGCCGCAGCACCGGGAGGCTaGGGGAACTCGGCTACCGGA | + |
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Preference number: 4 (lower is better) Translates to: CEVHEGGRCLIHLCIPCAAAPGG*GNSATG Trigger: TCCGGTAGCCGAGTTCCCCCAGCCTCCCGGTGCTGC...GGCACAGGGGATACAGAGATGAATAAGACACCGCCCTCCCTCATGGACCTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR CCA 90 bp | TGTGAGGTCCATGAGGGAGGGCGGTGTCTTATTCATCTCTGTATCCCCTGTGCCCAAGCCCGAAAGGGCTaGGCCCGAAGGCCGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CEVHEGGRCLIHLCIPCAQARKG*ARRPQS Trigger: GCTCTGCGGCCTTCGGGCCCAGCCCTTTCGGGCTTG...GGCACAGGGGATACAGAGATGAATAAGACACCGCCCTCCCTCATGGACCTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | GTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGCCTGGTCCCAGGTAGCAAAACCCGGAAGTaGATTCTCCTCGGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VMHPSGQRSPSGPCLVPGSKTRK*ILLGLQ Trigger: CTGGAGGCCGAGGAGAATGCACTTCCGGGTTTTGCT...ACCTGGGACCAGGCAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR TCA 90 bp | CTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAAAAGGGCCTAGCGGATTaGGTGCCTGGGCCGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LYPLCLANTDAERPSPDQKGLAD*VPGPQP Trigger: AGGCTGCGGCCCAGGCACTCAATCCGCTAGGCCCTT...TTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | CATACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTACTGCCAGGAAGGTaGCTGCAGCCGCAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HTLPHCNASLRTEITKWPLLPGR*LQPQPP Trigger: AGGAGGCTGCGGCTGCAGGCACCTTCCTGGCAGTAG...GGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | CATACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCAGCCAAGTCTGGGGTaGGAAGCGGTGGGCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: HTLPHCNASLRTEITKWPQPSLG*EAVGIG Trigger: CCCTATGCCCACCGCTTCCCACCCCAGACTTGGCTG...GGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | CTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAAGCGGACAGCCAAGTCTaGGGTGGGAAGCGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LYPLCLANTDAERPSPDQADSQV*GGKRWA Trigger: TGCCCACCGCTTCCCACCCCAGACTTGGCTGTCCGC...TTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | CTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAATGCCAGGAAGGTGCCTaGAGCCGCAGCCTCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LYPLCLANTDAERPSPDQCQEGA*SRSLLV Trigger: TACCAGGAGGCTGCGGCTGCAGGCACCTTCCTGGCA...TTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | TCTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCACTACTGCCAGGAAGGTaGCTGCAGCCGCAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SVSPVPSEYRCRKAISRSLLPGR*LQPQPP Trigger: AGGAGGCTGCGGCTGCAGGCACCTTCCTGGCAGTAG...TGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | CTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAAGAAGCGCCCATCACCTaGAGTGGGCCCCCAGATGAC | + |
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Preference number: 4 (lower is better) Translates to: LYPLCLANTDAERPSPDQEAPIT*SGPPDD Trigger: GTCATCTGGGGGCCCACTGCAGGTGATGGGCGCTTC...TTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR CCA 90 bp | CTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAACAGCCAAGTCTGGGGTaGGAAGCGGTGGGCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: LYPLCLANTDAERPSPDQQPSLG*EAVGIG Trigger: CCCTATGCCCACCGCTTCCCACCCCAGACTTGGCTG...TTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR CCA 90 bp | TCATCTCTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAAGCGGATTGAGTGCCTaGGCCGCAGCCTGCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: SSLYPLCLANTDAERPSPSGLSA*AAACNR Trigger: TCTGTTGCAGGCTGCGGCCCAGGCACTCAATCCGCT...TGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAGAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR TCA 90 bp | CTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAAAGTCCGCCAAAGTGGTaGACTCTACTGCCAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LYPLCLANTDAERPSPDQSPPKW*TLLPGR Trigger: CCTTCCTGGCAGTAGAGTTCACCACTTTGGCGGACT...TTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | TATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAAGAGAGCAAAACCCGGAAGTaGATTCTCCTCGGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: YPLCLANTDAERPSPDQESKTRK*ILLGLQ Trigger: CTGGAGGCCGAGGAGAATGCACTTCCGGGTTTTGCT...CTCTTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR CCA 90 bp | TGTGAGGTCCATGAGGGAGGGCGGTGTCTTATTCATCTCTGTATCCCCTGTGCCATGGGATTAGATCTCTaGAAGAGAAGCGCCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: CEVHEGGRCLIHLCIPCAMGLDL*KRSAHH Trigger: GTGATGGGCGCTTCTCTTCCAGAGATCTAATCCCAT...GGCACAGGGGATACAGAGATGAATAAGACACCGCCCTCCCTCATGGACCTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR CCA 90 bp | AAACAAGATATGTTTATTCATCTTTTTAATCCTCATGGCTCAGCACAGGGCCTGGCAGCACCGGGAGGCTaGGGGAACTCGGCTACCGGA | + |
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Preference number: 4 (lower is better) Translates to: KQDMFIHLFNPHGSAQGLAAPGG*GNSATG Trigger: TCCGGTAGCCGAGTTCCCCCAGCCTCCCGGTGCTGC...CAGGCCCTGTGCTGAGCCATGAGGATTAAAAAGATGAATAAACATATCTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372556.3 ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | AAGCTCACCATTCTACAATCTATCTTCAGGGAGGTATCCTTCTTTCCTACTACTGCGGACAGCCAAGTCTaGGGTGGGAAGCGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KLTILQSIFREVSFFPTTADSQV*GGKRWA Trigger: TGCCCACCGCTTCCCACCCCAGACTTGGCTGTCCGC...AGTAGTAGGAAAGAAGGATACCTCCCTGAAGATAGATTGTAGAATGGTGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR TCA 90 bp | ACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGGCTGTGTGTCGAGACTaGAGATTATCCACTATCTTC | + |
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Preference number: 4 (lower is better) Translates to: TLPHCNASLRTEITKWPLAVCRD*RLSTIF Trigger: GAAGATAGTGGATAATCTTCAGTCTCGACACACAGC...CAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR TCA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATCGCGCCGCCCGCTGCTaGAGTTGTCCAGGAAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHRAARC*SCPGSA Trigger: TGCGCTTCCTGGACAACTTCAGCAGCGGGCGGCGCG...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR TCA 90 bp | TTTAGTGAGTGTGAATCAAATGCTAGGCACCAGACTGATGCTTTCTTTTTGCTAAAGGGCCTAGCGGATTaGGTGCCTGGGCCGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: FSECESNARHQTDAFFLLKGLAD*VPGPQP Trigger: AGGCTGCGGCCCAGGCACTCAATCCGCTAGGCCCTT...TAGCAAAAAGAAAGCATCAGTCTGGTGCCTAGCATTTGATTCACACTCACTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR TCA 90 bp | CATACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCACAGCTGGCTAAGTTaGCTTCTAGCCCATACTCTA | + |
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Preference number: 4 (lower is better) Translates to: HTLPHCNASLRTEITKWPHSWLS*LLAHTL Trigger: TAGAGTATGGGCTAGAAGTCAACTTAGCCAGCTGTG...GGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR GCA 90 bp | TATTCATCTCTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTAGTGGTGAACTCTACTaGCAGGAAGGTGCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YSSLYPLCLANTDAERPSSGELY*QEGACS Trigger: GCTGCAGGCACCTTCCTGGCAGTAGAGTTCACCACT...AGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAGAGATGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | ACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGGCACTATGCTACTTGTaGACTCCAAACCCAAAACGT | + |
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Preference number: 4 (lower is better) Translates to: TLPHCNASLRTEITKWPLALCYL*TPNPKR Trigger: ACGTTTTGGGTTTGGAGTGCACAAGTAGCATAGTGC...CAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR GCA 90 bp | GTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGCCTGGTCCCAGGTGCTAATTTTTCAAATTaGACCTGGACTATCCTACAG | + |
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Preference number: 4 (lower is better) Translates to: VMHPSGQRSPSGPCLVPGANFSN*TWTILQ Trigger: CTGTAGGATAGTCCAGGTGCAATTTGAAAAATTAGC...ACCTGGGACCAGGCAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR GCA 90 bp | TCATCTCTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCACCTAGCGAATACAGATaGAGAAAGGCCATCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSLYPLCLANTDAERPSPPSEYR*RKAISR Trigger: TCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGG...TGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | TATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAAGAGTCTCTGTATCCCCTGTaGCTAGCGAATACAGATGCA | + |
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Preference number: 4 (lower is better) Translates to: YPLCLANTDAERPSPDQESLYPL*LANTDA Trigger: TGCATCTGTATTCGCTAGGCACAGGGGATACAGAGA...CTCTTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR GCA 90 bp | AAACAAGATATGTTTATTCATCTTTTTAATCCTCATGGCTCAGCACAGGGCCTGTCACCAAGTGGCCCCTaGCTGGTCCCAGGTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KQDMFIHLFNPHGSAQGLSPSGP*LVPGGR Trigger: CCTTCCACCTGGGACCAGGCAGGGGCCACTTGGTGA...CAGGCCCTGTGCTGAGCCATGAGGATTAAAAAGATGAATAAACATATCTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR GCA 90 bp | ACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGGTGAAACACAGTACCTaGTTCTACCTTAGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLPHCNASLRTEITKWPLVKHST*FYLSHQ Trigger: TTGATGACTAAGGTAGAAGCAGGTACTGTGTTTCAC...CAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATACAGAGATCACCAAGTaGCCCCTGCCTGGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHTEITK*PLPGPR Trigger: CCTGGGACCAGGCAGGGGCCACTTGGTGATCTCTGT...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | TTACTTTGCAGAGAGATTATCCTCATTTTATGCATGTGGACACTGAGATTAAGTAGCGGATTGAGTGCCTaGGCCGCAGCCTGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCREIILILCMWTLRLSSGLSA*AAACNR Trigger: TCTGTTGCAGGCTGCGGCCCAGGCACTCAATCCGCT...ACTTAATCTCAGTGTCCACATGCATAAAATGAGGATAATCTCTCTGCAAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR GCA 90 bp | ACACTGAGATTAAGTCAAATGCCTAAGTTTATAAAGCTAATAGGTGGCACAGCTAGTGGTGAACTCTACTaGCAGGAAGGTGCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRLSQMPKFIKLIGGTASGELY*QEGACS Trigger: GCTGCAGGCACCTTCCTGGCAGTAGAGTTCACCACT...AGCTGTGCCACCTATTAGCTTTATAAACTTAGGCATTTGACTTAATCTCAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR GCA 90 bp | CATACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCGAAGCAAAAAGTAAATaGAGTGAAAAGCTCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: HTLPHCNASLRTEITKWPEAKSK*SEKLTI Trigger: AATGGTGAGCTTTTCACTGCATTTACTTTTTGCTTC...GGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR GCA 90 bp | AAACAAGATATGTTTATTCATCTTTTTAATCCTCATGGCTCAGCACAGGGCCTGATCTTCATTGTTATCTaGAGTGGGCCCCCAGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQDMFIHLFNPHGSAQGLIFIVI*SGPPDD Trigger: GTCATCTGGGGGCCCACTGCAGATAACAATGAAGAT...CAGGCCCTGTGCTGAGCCATGAGGATTAAAAAGATGAATAAACATATCTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000372556.3 ENST00000372561.4 |
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| CDS-3UTR TCA 90 bp | AAACAAGATATGTTTATTCATCTTTTTAATCCTCATGGCTCAGCACAGGGCCTGGCTGTGTGTCGAGACTaGAGATTATCCACTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQDMFIHLFNPHGSAQGLAVCRD*RLSTIF Trigger: GAAGATAGTGGATAATCTTCAGTCTCGACACACAGC...CAGGCCCTGTGCTGAGCCATGAGGATTAAAAAGATGAATAAACATATCTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372556.3 ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | CTATGCTACTTGTGCACTCCAAACCCAAAACGTAGGACAGCAAGAGAAGTATTGCTGATAGCAATAACTTaGTTTCCGAGTCTTTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCYLCTPNPKRRTAREVLLIAIT*FPSLWL Trigger: TAACCAAAGACTCGGAAACCAAGTTATTGCTATCAG...CAATACTTCTCTTGCTGTCCTACGTTTTGGGTTTGGAGTGCACAAGTAGCATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR GCA 90 bp | CTCACAATAAATGGCATTACTTTGCAGAGAGATTATCCTCATTTTATGCATGTGATCTTCATTGTTATCTaGAGTGGGCCCCCAGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTINGITLQRDYPHFMHVIFIVI*SGPPDD Trigger: GTCATCTGGGGGCCCACTGCAGATAACAATGAAGAT...CACATGCATAAAATGAGGATAATCTCTCTGCAAAGTAATGCCATTTATTGTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATCATTGTGTCAGCTTTTaGACACACACTTTATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHHCVSF*THTLLH Trigger: GTGCAATAAAGTGTGTGTCCAAAAGCTGACACAATG...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372556.3 ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | CTCACAATAAATGGCATTACTTTGCAGAGAGATTATCCTCATTTTATGCATGTGCATTGTGTCAGCTTTTaGACACACACTTTATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTINGITLQRDYPHFMHVHCVSF*THTLLH Trigger: GTGCAATAAAGTGTGTGTCCAAAAGCTGACACAATG...CACATGCATAAAATGAGGATAATCTCTCTGCAAAGTAATGCCATTTATTGTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | AAACAAGATATGTTTATTCATCTTTTTAATCCTCATGGCTCAGCACAGGGCCTGTTTTCAAATTGCACCTaGACTATCCTACAGATCATT | + |
|
Preference number: 4 (lower is better) Translates to: KQDMFIHLFNPHGSAQGLFSNCT*TILQII Trigger: AATGATCTGTAGGATAGTCCAGGTGCAATTTGAAAA...CAGGCCCTGTGCTGAGCCATGAGGATTAAAAAGATGAATAAACATATCTTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CCA 90 bp | TTACTTTGCAGAGAGATTATCCTCATTTTATGCATGTGGACACTGAGATTAAGTGATCCTCACAATAAATaGCATTACTTTGCAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCREIILILCMWTLRLSDPHNK*HYFAER Trigger: TCTCTCTGCAAAGTAATGCCATTTATTGTGAGGATC...ACTTAATCTCAGTGTCCACATGCATAAAATGAGGATAATCTCTCTGCAAAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| 3UTR CAA 72 bp | GAATCAAATGCTAGGCACCAGACTGATGCTTTCTTTTaGCTATTTCATTTGATCCTCACAATAAATGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ESNARHQTDAFF*LFHLILTINGI Trigger: AATGCCATTTATTGTGAGGATCAAATGAAATAGCAAAAAGAAAGCATCAGTCTGGTGCCTAGCATTTGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
||
| CDS TCA 90 bp | CGGCTAGGAAGGCCTCGGCCGAGGTTGCACCGCGCCGCCCGCTGCTaGAGTTGTCCAGGAAGCGCACCGGCCGCGCTTCCAGTGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: RLGRPRPRLHRAARC*SCPGSAPAALPVGP Trigger: AGGTCCCACTGGAAGCGCGGCCGGTGCGCTTCCTGGACAACTTCAGCAGCGGGCGGCGCGGTGCAACCTCGGCCGAGGCCTTCCTAGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000472013.1 |
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| CDS CCA 90 bp | AAGGGCTGGGCCCGAAGGCCGCAGAGCGGACAGCCAAGTCTGGGGTaGGAAGCGGTGGGCATAGGGGAAGGCAGAGCGAGCGCGATACAA | + |
|
Preference number: 5 (lower is better) Translates to: KGWARRPQSGQPSLG*EAVGIGEGRASAIQ Trigger: TTGTATCGCGCTCGCTCTGCCTTCCCCTATGCCCACCGCTTCCCACCCCAGACTTGGCTGTCCGCTCTGCGGCCTTCGGGCCCAGCCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000471420.1 ENST00000472013.1 |
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| CDS CCA 90 bp | AAGTGCATTCTCCTCGGCCTCCAGGCTCAGCAAGCCCGAAAGGGCTaGGCCCGAAGGCCGCAGAGCGGACAGCCAAGTCTGGGGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KCILLGLQAQQARKG*ARRPQSGQPSLGWE Trigger: TTCCCACCCCAGACTTGGCTGTCCGCTCTGCGGCCTTCGGGCCCAGCCCTTTCGGGCTTGCTGAGCCTGGAGGCCGAGGAGAATGCACTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000471420.1 ENST00000472013.1 |
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| CDS GCA 90 bp | CGCAGCCTCCTGGTAGCTCCTCAGAGCCTCAGCAAAACCCGGAAGTaGATTCTCCTCGGCCTCCAGGCTCAGCAAGCCCGAAAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLLVAPQSLSKTRK*ILLGLQAQQARKGW Trigger: CCAGCCCTTTCGGGCTTGCTGAGCCTGGAGGCCGAGGAGAATGCACTTCCGGGTTTTGCTGAGGCTCTGAGGAGCTACCAGGAGGCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000471420.1 ENST00000472013.1 |
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| CDS CCA 90 bp | AGCCCAGCGAAAGTGACACTGCAACGAGGGGGATCCCCGGCTGGGTaGGCATCTGGTAGGGTCACGTTCCCTCACGTTCGTTTCCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPAKVTLQRGGSPAG*ASGRVTFPHVRFLA Trigger: GGCTAGGAAACGAACGTGAGGGAACGTGACCCTACCAGATGCCCACCCAGCCGGGGATCCCCCTCGTTGCAGTGTCACTTTCGCTGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS TCA 90 bp | CCTGGGCCGCAGCCTGCAACAGATGCAAATAGTCCGCCAAAGTGGTaGACTCTACTGCCAGGAAGGTGCCTGCAGCCGCAGCCTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGPQPATDANSPPKW*TLLPGRCLQPQPPG Trigger: ACCAGGAGGCTGCGGCTGCAGGCACCTTCCTGGCAGTAGAGTTCACCACTTTGGCGGACTATTTGCATCTGTTGCAGGCTGCGGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000471420.1 ENST00000472013.1 |
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| CDS CCA 90 bp | AAAACATCGCAGAAGGGCCTGGTGTACGCGCCGCGCCGTACTGAGTaGGCGGTTCACTACCCTTCTTTTGACACTAGGTCCCGATCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KTSQKGLVYAPRRTE*AVHYPSFDTRSRSR Trigger: GCGAGATCGGGACCTAGTGTCAAAAGAAGGGTAGTGAACCGCCCACTCAGTACGGCGCGGCGCGTACACCAGGCCCTTCTGCGATGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CCA 90 bp | GACCCTTACCGGCCACTGTACGGGCCTTTCTGGACTTGGACTCCTTaGGAGTCGTTTCTCGGCCATTTGACCCGTGGGACTTGTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DPYRPLYGPFWTWTP*ESFLGHLTRGTCGF Trigger: AAACCCACAAGTCCCACGGGTCAAATGGCCGAGAAACGACTCCCAAGGAGTCCAAGTCCAGAAAGGCCCGTACAGTGGCCGGTAAGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CCA 90 bp | GCCATGTTTGACCCTTACCGGCCACTGTACGGGCCTTTCTGGACTTaGACTCCTTGGGAGTCGTTTCTCGGCCATTTGACCCGTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AMFDPYRPLYGPFWT*TPWESFLGHLTRGT Trigger: AGTCCCACGGGTCAAATGGCCGAGAAACGACTCCCAAGGAGTCCAAGTCCAGAAAGGCCCGTACAGTGGCCGGTAAGGGTCAAACATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS-3UTR CAA 90 bp | CTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAACGCCCGCTGCTGAAGTaGTCCAGGAAGCGCACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYPLCLANTDAERPSPDQRPLLK*SRKRTG Trigger: GCCGGTGCGCTTCCTGGACAACTTCAGCAGCGGGCG...TTGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR CAA 90 bp | TCATCTCTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGAAGGGCCTAGCGGATaGAGTGCCTGGGCCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLYPLCLANTDAERPSPEGPSG*SAWAAA Trigger: GGCTGCGGCCCAGGCACTCAATCCGCTAGGCCCTTC...TGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAGAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS CCA 90 bp | AGGGTCACGTTCCCTCACGTTCGTTTCCTAGCCTGGGTGAAGAACTaGCCATGTTTGACCCTTACCGGCCACTGTACGGGCCTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RVTFPHVRFLAWVKN*PCLTLTGHCTGLSG Trigger: TCCAGAAAGGCCCGTACAGTGGCCGGTAAGGGTCAAACATGGCCAGTTCTTCACCCAGGCTAGGAAACGAACGTGAGGGAACGTGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS-3UTR CAA 90 bp | TCTGTATCCCCTGTGCCTAGCGAATACAGATGCAGAAAGGCCATCTCCAGATCAGCTTCCAGTGGGACCTaGGTGCCGCCTGACGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: SVSPVPSEYRCRKAISRSASSGT*VPPDVT Trigger: GGTTACGTCAGGCGGCACCAAGGTCCCACTGGAAGC...TGATCTGGAGATGGCCTTTCTGCATCTGTATTCGCTAGGCACAGGGGATACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372560.3 |
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| CDS-3UTR CAA 90 bp | CTATGCTACTTGTGCACTCCAAACCCAAAACGTAGGACAGCAAGAGAAGTATTGGAAGGGCCTAGCGGATaGAGTGCCTGGGCCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCYLCTPNPKRRTAREVLEGPSG*SAWAAA Trigger: GGCTGCGGCCCAGGCACTCAATCCGCTAGGCCCTTC...CAATACTTCTCTTGCTGTCCTACGTTTTGGGTTTGGAGTGCACAAGTAGCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS GCA 90 bp | TACCCTTCTTTTGACACTAGGTCCCGATCTCGCCAAGTCTGGAAATaGGTAGTTGTTCTGCCCCAGAGCCCAGCGAAAGTGACACTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YPSFDTRSRSRQVWK*VVVLPQSPAKVTLQ Trigger: TTGCAGTGTCACTTTCGCTGGGCTCTGGGGCAGAACAACTACGCATTTCCAGACTTGGCGAGATCGGGACCTAGTGTCAAAAGAAGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CCA 90 bp | GTTCACTACCCTTCTTTTGACACTAGGTCCCGATCTCGCCAAGTCTaGAAATGCGTAGTTGTTCTGCCCCAGAGCCCAGCGAAAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: VHYPSFDTRSRSRQV*KCVVVLPQSPAKVT Trigger: TGTCACTTTCGCTGGGCTCTGGGGCAGAACAACTACGCATTTCCAGACTTGGCGAGATCGGGACCTAGTGTCAAAAGAAGGGTAGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS-3UTR CAA 90 bp | CATACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCGCACAGCTGGCTAAGTaGACTTCTAGCCCATACTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTLPHCNASLRTEITKWPAQLAK*TSSPYS Trigger: AGAGTATGGGCTAGAAGTCAACTTAGCCAGCTGTGC...GGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CAA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATCGCCCGCTGCTGAAGTaGTCCAGGAAGCGCACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHRPLLK*SRKRTG Trigger: GCCGGTGCGCTTCCTGGACAACTTCAGCAGCGGGCG...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CAA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATGCTTCCAGTGGGACCTaGGTGCCGCCTGACGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHASSGT*VPPDVT Trigger: GGTTACGTCAGGCGGCACCAAGGTCCCACTGGAAGC...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CAA 90 bp | CATACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCCATTGTGTCAGCTTTaGGACACACACTTTATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HTLPHCNASLRTEITKWPPLCQL*DTHFIA Trigger: TGCAATAAAGTGTGTGTCCAAAAGCTGACACAATGG...GGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CAA 90 bp | ACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCCTGTGGTGTAACACTGCTTaGCTAAGTGAGAAAAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLPHCNASLRTEITKWPLWCNTA*LSEKNN Trigger: ATTGTTTTTCTCACTTAGCAAAGCAGTGTTACACCA...CAGGGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CAA 90 bp | CATACTCTACCACACTGTAATGCATCCCTCAGGACAGAGATCACCAAGTGGCCCTTGGTTTCCGAGTCTTaGGTTACAATAAACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTLPHCNASLRTEITKWPLVSES*VTINTK Trigger: CTTTGTGTTTATTGTAACCAAAGACTCGGAAACCAA...GGGCCACTTGGTGATCTCTGTCCTGAGGGATGCATTACAGTGTGGTAGAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS CCA 90 bp | ATGCAGAAAGGCCATCTCCAGATCAAGAGGAAATTAACCCAAGATTaGTTATATGGGATTAGATCTCTGGAAGAGAAGCGCCCATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: MQKGHLQIKRKLTQD*LYGIRSLEEKRPSP Trigger: AGGTGATGGGCGCTTCTCTTCCAGAGATCTAATCCCATATAACCAATCTTGGGTTAATTTCCTCTTGATCTGGAGATGGCCTTTCTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372560.3 ENST00000482168.1 |
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| CDS-3UTR CAA 90 bp | TTTAGTGAGTGTGAATCAAATGCTAGGCACCAGACTGATGCTTTCTTTTTGCTATTTGCACTATGCTACTaGTGCACTCCAAACCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSECESNARHQTDAFFLLFALCY*CTPNPK Trigger: TTTTGGGTTTGGAGTGCACAAGTAGCATAGTGCAAA...TAGCAAAAAGAAAGCATCAGTCTGGTGCCTAGCATTTGATTCACACTCACTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS-3UTR CAA 90 bp | AAACAAGATATGTTTATTCATCTTTTTAATCCTCATGGCTCAGCACAGGGCCTGTTGGTTTCCGAGTCTTaGGTTACAATAAACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KQDMFIHLFNPHGSAQGLLVSES*VTINTK Trigger: CTTTGTGTTTATTGTAACCAAAGACTCGGAAACCAA...CAGGCCCTGTGCTGAGCCATGAGGATTAAAAAGATGAATAAACATATCTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372556.3 ENST00000372561.4 |
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| CDS-3UTR CAA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATTCTGATAGCAATAACTaGGTTTCCGAGTCTTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHSDSNN*VSESLV Trigger: AACCAAAGACTCGGAAACCAAGTTATTGCTATCAGA...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372556.3 ENST00000372561.4 |
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| CDS-3UTR CAA 90 bp | CTGACATACATAGGCATTCAACCAATATTTGATCTCCAAAGCATGACCATTCATAAAACATCCTTTCCATaGTGTCAGCTTTTGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LTYIGIQPIFDLQSMTIHKTSFP*CQLLDT Trigger: TGTGTCCAAAAGCTGACACAATGGAAAGGATGTTTT...ATGAATGGTCATGCTTTGGAGATCAAATATTGGTTGAATGCCTATGTATGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372561.4 |
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| CDS TCA 72 bp | AGGCCTCGGCCGAGGTTGCACCGCGCCGCCCGCTGCTaGAGTTGTCCAGGAAGCGCACCGGCCGCGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPRPRLHRAARC*SCPGSAPAALP Trigger: TGGAAGCGCGGCCGGTGCGCTTCCTGGACAACTTCAGCAGCGGGCGGCGCGGTGCAACCTCGGCCGAGGCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000472013.1 |
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| CDS CAA 72 bp | TCGGCCGAGGTTGCACCGCGCCGCCCGCTGCTGAAGTaGTCCAGGAAGCGCACCGGCCGCGCTTCCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAEVAPRRPLLK*SRKRTGRASSG Trigger: CCCACTGGAAGCGCGGCCGGTGCGCTTCCTGGACAACTTCAGCAGCGGGCGGCGCGGTGCAACCTCGGCCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000472013.1 |
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| CDS CCA 72 bp | GCCCGAAGGCCGCAGAGCGGACAGCCAAGTCTGGGGTaGGAAGCGGTGGGCATAGGGGAAGGCAGAGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ARRPQSGQPSLG*EAVGIGEGRAS Trigger: GCTCGCTCTGCCTTCCCCTATGCCCACCGCTTCCCACCCCAGACTTGGCTGTCCGCTCTGCGGCCTTCGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000471420.1 ENST00000472013.1 |
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| CDS CCA 72 bp | CTCCTCGGCCTCCAGGCTCAGCAAGCCCGAAAGGGCTaGGCCCGAAGGCCGCAGAGCGGACAGCCAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGLQAQQARKG*ARRPQSGQPSL Trigger: CAGACTTGGCTGTCCGCTCTGCGGCCTTCGGGCCCAGCCCTTTCGGGCTTGCTGAGCCTGGAGGCCGAGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000471420.1 ENST00000472013.1 |
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| CDS CCA 72 bp | CAGAAGGGCCTGGTGTACGCGCCGCGCCGTACTGAGTaGGCGGTTCACTACCCTTCTTTTGACACTAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QKGLVYAPRRTE*AVHYPSFDTRS Trigger: GGACCTAGTGTCAAAAGAAGGGTAGTGAACCGCCCACTCAGTACGGCGCGGCGCGTACACCAGGCCCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CAA 72 bp | CCGGCCACTGTACGGGCCTTTCTGGACTTGGACTCCTaGGGAGTCGTTTCTCGGCCATTTGACCCGTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PATVRAFLDLDS*GVVSRPFDPWD Trigger: GTCCCACGGGTCAAATGGCCGAGAAACGACTCCCAAGGAGTCCAAGTCCAGAAAGGCCCGTACAGTGGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CCA 72 bp | CGGCCACTGTACGGGCCTTTCTGGACTTGGACTCCTTaGGAGTCGTTTCTCGGCCATTTGACCCGTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: RPLYGPFWTWTP*ESFLGHLTRGT Trigger: AGTCCCACGGGTCAAATGGCCGAGAAACGACTCCCAAGGAGTCCAAGTCCAGAAAGGCCCGTACAGTGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CAA 72 bp | GCAAAAGGGGTACTCCTAGGGCACGCACCTAGCGGATaGAGTGCCTGGGCCGCAGCCTGCAACAGATGCAAA | + |
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Preference number: 6 (lower is better) Translates to: AKGVLLGHAPSG*SAWAAACNRCK Trigger: TTTGCATCTGTTGCAGGCTGCGGCCCAGGCACTCAATCCGCTAGGTGCGTGCCCTAGGAGTACCCCTTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472013.1 |
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| CDS CCA 72 bp | GACCCTTACCGGCCACTGTACGGGCCTTTCTGGACTTaGACTCCTTGGGAGTCGTTTCTCGGCCATTTGACC | + |
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Preference number: 6 (lower is better) Translates to: DPYRPLYGPFWT*TPWESFLGHLT Trigger: GGTCAAATGGCCGAGAAACGACTCCCAAGGAGTCCAAGTCCAGAAAGGCCCGTACAGTGGCCGGTAAGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS TCA 72 bp | CAGCCTGCAACAGATGCAAATAGTCCGCCAAAGTGGTaGACTCTACTGCCAGGAAGGTGCCTGCAGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: QPATDANSPPKW*TLLPGRCLQPQ Trigger: CTGCGGCTGCAGGCACCTTCCTGGCAGTAGAGTTCACCACTTTGGCGGACTATTTGCATCTGTTGCAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000372560.3 ENST00000372561.4 ENST00000471420.1 ENST00000472013.1 |
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| CDS CCA 72 bp | GGTAGGGTCACGTTCCCTCACGTTCGTTTCCTAGCCTaGGTGAAGAACTGGCCATGTTTGACCCTTACCGGC | + |
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Preference number: 6 (lower is better) Translates to: GRVTFPHVRFLA*VKNWPCLTLTG Trigger: GCCGGTAAGGGTCAAACATGGCCAGTTCTTCACCCAGGCTAGGAAACGAACGTGAGGGAACGTGACCCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CAA 90 bp | TTCCCTCACGTTCGTTTCCTAGCCTGGGTGAAGAACTGGCCATGTTaGACCCTTACCGGCCACTGTACGGGCCTTTCTGGACTTGGACTC | + |
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Preference number: 6 (lower is better) Translates to: FPHVRFLAWVKNWPC*TLTGHCTGLSGLGL Trigger: GAGTCCAAGTCCAGAAAGGCCCGTACAGTGGCCGGTAAGGGTCAAACATGGCCAGTTCTTCACCCAGGCTAGGAAACGAACGTGAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CCA 72 bp | CCTTCTTTTGACACTAGGTCCCGATCTCGCCAAGTCTaGAAATGCGTAGTTGTTCTGCCCCAGAGCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: PSFDTRSRSRQV*KCVVVLPQSPA Trigger: CGCTGGGCTCTGGGGCAGAACAACTACGCATTTCCAGACTTGGCGAGATCGGGACCTAGTGTCAAAAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CAA 72 bp | GTTCGTTTCCTAGCCTGGGTGAAGAACTGGCCATGTTaGACCCTTACCGGCCACTGTACGGGCCTTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VRFLAWVKNWPC*TLTGHCTGLSG Trigger: TCCAGAAAGGCCCGTACAGTGGCCGGTAAGGGTCAAACATGGCCAGTTCTTCACCCAGGCTAGGAAACGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CAA 72 bp | CGCGCCGTACTGAGTGGGCGGTTCACTACCCTTCTTTaGACACTAGGTCCCGATCTCGCCAAGTCTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: RAVLSGRFTTLL*TLGPDLAKSGN Trigger: ATTTCCAGACTTGGCGAGATCGGGACCTAGTGTCAAAAGAAGGGTAGTGAACCGCCCACTCAGTACGGCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS GCA 72 bp | TTTGACACTAGGTCCCGATCTCGCCAAGTCTGGAAATaGGTAGTTGTTCTGCCCCAGAGCCCAGCGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: FDTRSRSRQVWK*VVVLPQSPAKV Trigger: CACTTTCGCTGGGCTCTGGGGCAGAACAACTACGCATTTCCAGACTTGGCGAGATCGGGACCTAGTGTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CCA 72 bp | GACTCCTTGGGAGTCGTTTCTCGGCCATTTGACCCGTaGGACTTGTGGGTTTTGTGCTGCTTTTTCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: DSLGVVSRPFDP*DLWVLCCFFFL Trigger: AAGAAAGAAAAAGCAGCACAAAACCCACAAGTCCCACGGGTCAAATGGCCGAGAAACGACTCCCAAGGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372562.1 |
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| CDS CAA 72 bp | CTTCACTGTGCTGGCTGGAATAAGCACCAAACAGAGTaGTTCTTCTGTAGTAGCAAGGGGATTGATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LHCAGWNKHQTE*FFCSSKGIDFF Trigger: GAAGAAATCAATCCCCTTGCTACTACAGAAGAACAACTCTGTTTGGTGCTTATTCCAGCCAGCACAGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471420.1 |
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| CDS CAA 90 bp | TCAGCCTGTCTTCACTGTGCTGGCTGGAATAAGCACCAAACAGAGTaGTTCTTCTGTAGTAGCAAGGGGATTGATTTCTTCTTTTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SACLHCAGWNKHQTE*FFCSSKGIDFFFFK Trigger: CTTGAAAAAGAAGAAATCAATCCCCTTGCTACTACAGAAGAACAACTCTGTTTGGTGCTTATTCCAGCCAGCACAGTGAAGACAGGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471420.1 |
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