Pregenerated sensors for PPBP (Homo sapiens)

Ensembl gene IDs: ENSG00000163736

Ensembl transcript IDs: ENST00000296028.4

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTCCTCCCATCCTTCAGTGTGGCTATCACTTCGACTTGGTTGCAATaGGTTCCTTTCCCGATCACTTCCAAACTTTGGATGTTTTTGGGA	+
Preference number: 5 (lower is better) Translates to: FLPSFSVAITSTWLQ*VPFPITSKLWMFLG Trigger: TCCCAAAAACATCCAAAGTTTGGAAGTGATCGGGAAAGGAACCCATTGCAACCAAGTCGAAGTGATAGCCACACTGAAGGATGGGAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296028.4
CDS CCA 72 bp	TTCCTCCCATCCTTCAGTGTGGCTATCACTTCGACTTaGTTGCAATGGGTTCCTTTCCCGATCACTTCCAAA	+
Preference number: 6 (lower is better) Translates to: FLPSFSVAITST*LQWVPFPITSK Trigger: TTTGGAAGTGATCGGGAAAGGAACCCATTGCAACCAAGTCGAAGTGATAGCCACACTGAAGGATGGGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296028.4
CDS CAA 72 bp	CTCCCATCCTTCAGTGTGGCTATCACTTCGACTTGGTaGCAATGGGTTCCTTTCCCGATCACTTCCAAACTT	+
Preference number: 6 (lower is better) Translates to: LPSFSVAITSTW*QWVPFPITSKL Trigger: AAGTTTGGAAGTGATCGGGAAAGGAACCCATTGCAACCAAGTCGAAGTGATAGCCACACTGAAGGATGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296028.4
CDS GCA 72 bp	TCCCATCCTTCAGTGTGGCTATCACTTCGACTTGGTTaGAATGGGTTCCTTTCCCGATCACTTCCAAACTTT	+
Preference number: 6 (lower is better) Translates to: SHPSVWLSLRLG*NGFLSRSLPNF Trigger: AAAGTTTGGAAGTGATCGGGAAAGGAACCCATTGCAACCAAGTCGAAGTGATAGCCACACTGAAGGATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296028.4
CDS CCA 72 bp	TCCTTCAGTGTGGCTATCACTTCGACTTGGTTGCAATaGGTTCCTTTCCCGATCACTTCCAAACTTTGGATG	+
Preference number: 6 (lower is better) Translates to: SFSVAITSTWLQ*VPFPITSKLWM Trigger: CATCCAAAGTTTGGAAGTGATCGGGAAAGGAACCCATTGCAACCAAGTCGAAGTGATAGCCACACTGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296028.4
CDS TCA 72 bp	TTCCCGATCACTTCCAAACTTTGGATGTTTTTGGGATaGATTCCAGAGGTTGTCTTTATACACATGCAGCGG	+
Preference number: 6 (lower is better) Translates to: FPITSKLWMFLG*IPEVVFIHMQR Trigger: CCGCTGCATGTGTATAAAGACAACCTCTGGAATTCATCCCAAAAACATCCAAAGTTTGGAAGTGATCGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296028.4

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