RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPARGC1B (Homo sapiens)

Ensembl gene IDs: ENSG00000155846

Ensembl transcript IDs: ENST00000309241.10, ENST00000360453.8, ENST00000394320.7, ENST00000403750.5, ENST00000434684.1, ENST00000461780.1, ENST00000492495.1

Found 1219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCACCGTGGAGTGGCTGCAGCCCAAGGCCTTGGGGAGCTGGGATaGGCGCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATC +
Preference number: 1 (lower is better)
Translates to: GHRGVAAAQGLGELG*ALDCGHCLPSCWDI
Trigger: GATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAGCCACTCCACGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 90 bp GTGGAGTGGCTGCAGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTaGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCA +
Preference number: 1 (lower is better)
Translates to: VEWLQPKALGSWDER*TVGTACHPAGTSWP
Trigger: TGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAGCCACTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 90 bp TGCCACTATGAGTGGGCACCGTGGAGTGGCTGCAGCCCAAGGCCTTaGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATC +
Preference number: 1 (lower is better)
Translates to: CHYEWAPWSGCSPRP*GAGMSAGLWALPAI
Trigger: GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAGCCACTCCACGGTGCCCACTCATAGTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR GCA 90 bp GTCGGGAAGGAAGGGGCGATGGGTGACGGACCCGGCACTTCGAGGTaGACCCGGGACAACCCGTTGGAAGCGAGGACACTAATGTGGCAG +
Preference number: 1 (lower is better)
Translates to: VGKEGAMGDGPGTSR*TRDNPLEARTLMWQ
Trigger: CTGCCACATTAGTGTCCTCGCTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCGCCCCTTCCTTCCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GGCTGCAGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTaGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATC +
Preference number: 1 (lower is better)
Translates to: GCSPRPWGAGMSAGL*ALPAILLGHLGHGI
Trigger: GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR TCA 90 bp GCAAGTCTACGAGAGGAAGTCAGTCGGGAAGGAAGGGGCGATGGGTaGCGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGA +
Preference number: 1 (lower is better)
Translates to: ASLREEVSREGRGDG*RTRHFEVHPGQPVG
Trigger: TCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCGCCCCTTCCTTCCCGACTGACTTCCTCTCGTAGACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp GCAGCCAAGGGCAGGGCCGCCTGGCCTGGCACCCAGCCGGGTCACTaGCACTCAGTCCTGTACCATCAAGGCTGCATTGGATTCTCTCCA +
Preference number: 1 (lower is better)
Translates to: AAKGRAAWPGTQPGH*HSVLYHQGCIGFSP
Trigger: TGGAGAGAATCCAATGCAGCCTTGATGGTACAGGACTGAGTGTCAGTGACCCGGCTGGGTGCCAGGCCAGGCGGCCCTGCCCTTGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 90 bp AGCTGCAAGTCTACGAGAGGAAGTCAGTCGGGAAGGAAGGGGCGATaGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGT +
Preference number: 1 (lower is better)
Translates to: SCKSTRGSQSGRKGR*VTDPALRGAPGTTR
Trigger: ACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCGCCCCTTCCTTCCCGACTGACTTCCTCTCGTAGACTTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp AAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTaGCATCCTGCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGG +
Preference number: 1 (lower is better)
Translates to: KALGSWDERWTVGTA*HPAGTSWPWYQCLR
Trigger: CCTGAGACACTGATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 90 bp TTACCCCAGCTACTACGGAAGCACGGGACCAAGAACCAGAAGGCCTaGTCTGGGTCACCGCTCTGCCTCCTCACTGGTAACCGGACCTCC +
Preference number: 1 (lower is better)
Translates to: LPQLLRKHGTKNQKA*SGSPLCLLTGNRTS
Trigger: GGAGGTCCGGTTACCAGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTGCTTCCGTAGTAGCTGGGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp AAGCACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTaGCTCCTCACTGGTAACCGGACCTCCCACAGTCATTTCGCCTCT +
Preference number: 1 (lower is better)
Translates to: KHGTKNQKAWSGSPL*LLTGNRTSHSHFAS
Trigger: AGAGGCGAAATGACTGTGGGAGGTCCGGTTACCAGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GTGTCTTGTAGCCGGCTCAGGGCCTCCCCCATCCCATGGTGGTTCTaGGCCAAGGACACATCCATGCATGTGGGTTTCCAACTCTGCAGC +
Preference number: 1 (lower is better)
Translates to: VSCSRLRASPIPWWF*AKDTSMHVGFQLCS
Trigger: GCTGCAGAGTTGGAAACCCACATGCATGGATGTGTCCTTGGCCCAGAACCACCATGGGATGGGGGAGGCCCTGAGCCGGCTACAAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp TCCTGGGTGTCTTGTAGCCGGCTCAGGGCCTCCCCCATCCCATGGTaGTTCTGGGCCAAGGACACATCCATGCATGTGGGTTTCCAACTC +
Preference number: 1 (lower is better)
Translates to: SWVSCSRLRASPIPW*FWAKDTSMHVGFQL
Trigger: GAGTTGGAAACCCACATGCATGGATGTGTCCTTGGCCCAGAACCACCATGGGATGGGGGAGGCCCTGAGCCGGCTACAAGACACCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp CCAGACCACCTGTCTGTACCGCTGCCAGGGGTGTCACTGAAGTTCTaGCAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGG +
Preference number: 1 (lower is better)
Translates to: PDHLSVPLPGVSLKF*QCVHRHRQTAGPLR
Trigger: CCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTGTCAGAACTTCAGTGACACCCCTGGCAGCGGTACAGACAGGTGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp CCCCCATCCCATGGTGGTTCTGGGCCAAGGACACATCCATGCATGTaGGTTTCCAACTCTGCAGCTCCCCTCCATTTACCCGGTACCTCC +
Preference number: 1 (lower is better)
Translates to: PPSHGGSGPRTHPCM*VSNSAAPLHLPGTS
Trigger: GGAGGTACCGGGTAAATGGAGGGGAGCTGCAGAGTTGGAAACCCACATGCATGGATGTGTCCTTGGCCCAGAACCACCATGGGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp ACTTCCTGGGTGTCTTGTAGCCGGCTCAGGGCCTCCCCCATCCCATaGTGGTTCTGGGCCAAGGACACATCCATGCATGTGGGTTTCCAA +
Preference number: 1 (lower is better)
Translates to: TSWVSCSRLRASPIP*WFWAKDTSMHVGFQ
Trigger: TTGGAAACCCACATGCATGGATGTGTCCTTGGCCCAGAACCACCATGGGATGGGGGAGGCCCTGAGCCGGCTACAAGACACCCAGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GAGCGCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTaGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTAGA +
Preference number: 1 (lower is better)
Translates to: ERWTVGTACHPAGTS*PWYQCLRALAVLSR
Trigger: TCTAGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 90 bp TGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATaGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTAGAGACCTG +
Preference number: 1 (lower is better)
Translates to: WTVGTACHPAGTSWP*YQCLRALAVLSRDL
Trigger: CAGGTCTCTAGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR TCA 90 bp AGTCAAGGAGACCGTAGCCACGGTTCTGCCAGCTGGCTGTGCACATaGCTGAATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGG +
Preference number: 1 (lower is better)
Translates to: SQGDRSHGSASWLCT*LNLPRGRGRLDSLW
Trigger: CCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGATTCAGTCATGTGCACAGCCAGCTGGCAGAACCGTGGCTACGGTCTCCTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR GCA 90 bp GAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTGTaGGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATC +
Preference number: 1 (lower is better)
Translates to: ENTSTAQKRTVRPAL*GRLSTQSTASFMAI
Trigger: GATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp TCTAGCCCGGTGCCCAATTTAGCCGAACTCACCTCTACCAGTCCCTaGAACGGTGTCTTTACCCCAGCTACTACGGAAGCACGGGACCAA +
Preference number: 1 (lower is better)
Translates to: SSPVPNLAELTSTSP*NGVFTPATTEARDQ
Trigger: TTGGTCCCGTGCTTCCGTAGTAGCTGGGGTAAAGACACCGTTTCAGGGACTGGTAGAGGTGAGTTCGGCTAAATTGGGCACCGGGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp AGGGAAGAGGGGAAGGCAGTGAGCAACTTACAAAGACCGGATGGTTaGAGAATCTGCCACTATGAGTGGGCACCGTGGAGTGGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: REEGKAVSNLQRPDG*RICHYEWAPWSGCS
Trigger: GCTGCAGCCACTCCACGGTGCCCACTCATAGTGGCAGATTCTTCAACCATCCGGTCTTTGTAAGTTGCTCACTGCCTTCCCCTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR GCA 90 bp CAGGCAGCGTCCCCTAGCCCTGACTTTAGGTATGTCATGTCCCAATaGCACGCTCAGGTCTCTGCTCAAGGGCCAACGTCTAAGCTAACT +
Preference number: 1 (lower is better)
Translates to: QAASPSPDFRYVMSQ*HAQVSAQGPTSKLT
Trigger: AGTTAGCTTAGACGTTGGCCCTTGAGCAGAGACCTGAGCGTGGCATTGGGACATGACATACCTAAAGTCAGGGCTAGGGGACGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp TCGAGGTGCACCCGGGACAACCCGTTGGAAGCGAGGACACTAATGTaGCAGTGGAACGTCAACACCATGGAAACTCACAGACAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: SRCTRDNPLEARTLM*QWNVNTMETHRQKQ
Trigger: CTGCTTCTGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCTTCCAACGGGTTGTCCCGGGTGCACCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp ACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTaGGTAGCTGGTGGAGACAACCTTTGGCCACTAGATGGCGACCGC +
Preference number: 1 (lower is better)
Translates to: TMDSRVAERIYLPSI*VAGGDNLWPLDGDR
Trigger: GCGGTCGCCATCTAGTGGCCAAAGGTTGTCTCCACCAGCTACCCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp ATCCTGCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTaGCTGTCCTATCTAGAGACCTGGAGGCCCAAACTAGAGCACTCC +
Preference number: 1 (lower is better)
Translates to: ILLGHLGHGISVSGP*LSYLETWRPKLEHS
Trigger: GGAGTGCTCTAGTTTGGGCCTCCAGGTCTCTAGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR GCA 90 bp AGTACTGGGTCTTTGCAGCTCAGAGCATTCCTCCCTTCCTTCTCCTaGCCGCAAAGCCCTGCCTCTCTCCTGAGTACATATGACACTCCA +
Preference number: 1 (lower is better)
Translates to: STGSLQLRAFLPSFS*PQSPASLLSTYDTP
Trigger: TGGAGTGTCATATGTACTCAGGAGAGAGGCAGGGCTTTGCGGGCAGGAGAAGGAAGGGAGGAATGCTCTGAGCTGCAAAGACCCAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp ATGGCACAAGGAGGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTaGACTAAGCTGGACTTCTGGATGGTCATCTTCCCCAGAAACCAT +
Preference number: 1 (lower is better)
Translates to: MAQGGEGVGVNSRAD*TKLDFWMVIFPRNH
Trigger: ATGGTTTCTGGGGAAGATGACCATCCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCCTCCTTGTGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp AAGAGACGTCTCACTGCATCTCCTCCCACGTCAGAACTTGAGTACTaGGTCTTTGCAGCTCAGAGCATTCCTCCCTTCCTTCTCCTGCCC +
Preference number: 1 (lower is better)
Translates to: KRRLTASPPTSELEY*VFAAQSIPPFLLLP
Trigger: GGGCAGGAGAAGGAAGGGAGGAATGCTCTGAGCTGCAAAGACCCAGTACTCAAGTTCTGACGTGGGAGGAGATGCAGTGAGACGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp AAGGCAACTCAGCCAGGACACAGTGGGATTGAACCTACTGCTGGTTaGTTCTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAG +
Preference number: 1 (lower is better)
Translates to: KATQPGHSGIEPTAG*FLQRTLTLNRSWVK
Trigger: CTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAGAACCAACCAGCAGTAGGTTCAATCCCACTGTGTCCTGGCTGAGTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp CATTCCTCCCTTCCTTCTCCTGCCCGCAAAGCCCTGCCTCTCTCCTaGGTACATATGACACTCCATGCTGCAAGATTTCAAGGCAGATGC +
Preference number: 1 (lower is better)
Translates to: HSSLPSPARKALPLS*VHMTLHAARFQGRC
Trigger: GCATCTGCCTTGAAATCTTGCAGCATGGAGTGTCATATGTACTCAGGAGAGAGGCAGGGCTTTGCGGGCAGGAGAAGGAAGGGAGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp AAGCCAATGCTAACAACATGGCACAAGGAGGCGAGGGGGTGGGTGTaGATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGATGGTCA +
Preference number: 1 (lower is better)
Translates to: KPMLTTWHKEARGWV*IPEQTALSWTSGWS
Trigger: TGACCATCCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCCTCCTTGTGCCATGTTGTTAGCATTGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp ATGAGCTGGGCACAAGATGGGGGCTCCTATAATTTGAGCCAAACTTaGTCAGTAAGAGACAAGGCAGGGCTTGGCAGATACGGCCCGGAA +
Preference number: 1 (lower is better)
Translates to: MSWAQDGGSYNLSQT*SVRDKAGLGRYGPE
Trigger: TTCCGGGCCGTATCTGCCAAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCCATCTTGTGCCCAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp CTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATaGTCCAAGCCAATGCTAACAACATGGCACAAGGAGGCGAGGGGG +
Preference number: 1 (lower is better)
Translates to: LVLVSTLAAASGRSR*SKPMLTTWHKEARG
Trigger: CCCCCTCGCCTCCTTGTGCCATGTTGTTAGCATTGGCTTGGAGCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp AAATTCCCTACCCCTACTAAAGCCTGTCTCTTCCGGCCTTGTCCATaGGCTGGGAGTATGCTCACCACTCAGTGGAAGATCATGGGCTCA +
Preference number: 1 (lower is better)
Translates to: KFPTPTKACLFRPCP*AGSMLTTQWKIMGS
Trigger: TGAGCCCATGATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGCCGGAAGAGACAGGCTTTAGTAGGGGTAGGGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTaGGTTACTCCTCAATTTGGTGGGAAAGAGACCAAGGTTCACTCG +
Preference number: 1 (lower is better)
Translates to: GQSYNEMVANGSCSL*VTPQFGGKETKVHS
Trigger: CGAGTGAACCTTGGTCTCTTTCCCACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp CAGGCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATaGACTGAGCTGTCCATGCAGAAGGACCAGGCTGTCCATGCCTTC +
Preference number: 1 (lower is better)
Translates to: QAQMGLTELYTWDGP*TELSMQKDQAVHAF
Trigger: GAAGGCATGGACAGCCTGGTCCTTCTGCATGGACAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GACCAGAGGCCAGAAGAGAAACAGGATGGTAGTCTTCAGGCAAAGTaGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGG +
Preference number: 1 (lower is better)
Translates to: DQRPEEKQDGSLQAK*LQSYTKQHTGVWGW
Trigger: CCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTGAAGACTACCATCCTGTTTCTCTTCTGGCCTCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR TCA 90 bp TGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTaGTGGTGCATCCAAGACACATGCCAGGGCTTGAATTCACCTGAT +
Preference number: 1 (lower is better)
Translates to: CPQAQTNRRTTQDQS*WCIQDTCQGLNSPD
Trigger: ATCAGGTGAATTCAAGCCCTGGCATGTGTCTTGGATGCACCATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp AGGCAACAAGAGACGTCTCACTGCATCTCCTCCCACGTCAGAACTTaGGTACTGGGTCTTTGCAGCTCAGAGCATTCCTCCCTTCCTTCT +
Preference number: 1 (lower is better)
Translates to: RQQETSHCISSHVRT*VLGLCSSEHSSLPS
Trigger: AGAAGGAAGGGAGGAATGCTCTGAGCTGCAAAGACCCAGTACTCAAGTTCTGACGTGGGAGGAGATGCAGTGAGACGTCTCTTGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp ATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTaGCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTAT +
Preference number: 1 (lower is better)
Translates to: IFGKHQHGTETDSTT*PVRAAIDTVYSKLY
Trigger: ATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp AGAGGCCAGAAGAGAAACAGGATGGTAGTCTTCAGGCAAAGTGGCTaGAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGC +
Preference number: 1 (lower is better)
Translates to: RGQKRNRMVVFRQSG*KVIPSSTLGCGDGS
Trigger: GCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTGAAGACTACCATCCTGTTTCTCTTCTGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 90 bp CTTGCCCCGCCTTCCTTACAAGGTACTCAAGAGTCTGAGTACAAATaGATAGACACACACTTGGAGCATGAGCTGGGCACAAGATGGGGG +
Preference number: 1 (lower is better)
Translates to: LAPPSLQGTQESEYK*IDTHLEHELGTRWG
Trigger: CCCCCATCTTGTGCCCAGCTCATGCTCCAAGTGTGTGTCTATCCATTTGTACTCAGACTCTTGAGTACCTTGTAAGGAAGGCGGGGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp AAGTGCTTTTATTGTTTAATGCAAAGTCAGCCTTTGCCTACTTCCTaGGTGTCTTGTAGCCGGCTCAGGGCCTCCCCCATCCCATGGTGG +
Preference number: 1 (lower is better)
Translates to: KCFYCLMQSQPLPTS*VSCSRLRASPIPWW
Trigger: CCACCATGGGATGGGGGAGGCCCTGAGCCGGCTACAAGACACCCAGGAAGTAGGCAAAGGCTGACTTTGCATTAAACAATAAAAGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp CAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGGTAGCTGGTaGAGACAACCTTTGGCCACTAGATGGCGACCGCATGTTGATAAG +
Preference number: 1 (lower is better)
Translates to: QGGRKDLFAFHLGSW*RQPLATRWRPHVDK
Trigger: CTTATCAACATGCGGTCGCCATCTAGTGGCCAAAGGTTGTCTCCACCAGCTACCCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GAATTCGGACCACCCAGCAAAGGTTTACTTAACAAGGTCAGCAGCTaGGCTGCCAGTATTGCAGTTACAGTAAACCCTTCCCGGGCACCT +
Preference number: 1 (lower is better)
Translates to: EFGPPSKGLLNKVSS*AASIAVTVNPSRAP
Trigger: AGGTGCCCGGGAAGGGTTTACTGTAACTGCAATACTGGCAGCCCAGCTGCTGACCTTGTTAAGTAAACCTTTGCTGGGTGGTCCGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp GTCTCTTCTGCCCACAGGACAGCTAGTGCATTTCTCAGTTCTGCGTaGGAGTCTACTAAGTGGCTGCTTCTGGAGTCTTCTGACCCTAGT +
Preference number: 1 (lower is better)
Translates to: VSSAHRTASAFLSSA*ESTKWLLLESSDPS
Trigger: ACTAGGGTCAGAAGACTCCAGAAGCAGCCACTTAGTAGACTCTCACGCAGAACTGAGAAATGCACTAGCTGTCCTGTGGGCAGAAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp CAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCCCTTaGGATTTCCCACCTGTTTCCATTGGAATCAGAACATCCCTCAAG +
Preference number: 1 (lower is better)
Translates to: QSIPLLHIPPCPRSP*DFPPVSIGIRTSLK
Trigger: CTTGAGGGATGTTCTGATTCCAATGGAAACAGGTGGGAAATCTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp CAAACACTAGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTaGTCCCTCTGGGTTACTCCTCAATTTGGTGGGAAAGAGACCAAG +
Preference number: 1 (lower is better)
Translates to: QTLGQSYNEMVANGS*SLWVTPQFGGKETK
Trigger: CTTGGTCTCTTTCCCACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCTAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GAAACAATGTACTCATACCCTGCCTGGCCATGCTCCCTGCATGAATaGCCCCCAAGGTACCCACAGAACATTAAGCTGGAAATGGCTTTG +
Preference number: 1 (lower is better)
Translates to: ETMYSYPAWPCSLHE*PPRYPQNIKLEMAL
Trigger: CAAAGCCATTTCCAGCTTAATGTTCTGTGGGTACCTTGGGGGCCATTCATGCAGGGAGCATGGCCAGGCAGGGTATGAGTACATTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp TCTCTTAAGCTGCAGGCTCAAATGGGATTAACTGAACTCTATACCTaGGATGGGCCATGGACTGAGCTGTCCATGCAGAAGGACCAGGCT +
Preference number: 1 (lower is better)
Translates to: SLKLQAQMGLTELYT*DGPWTELSMQKDQA
Trigger: AGCCTGGTCCTTCTGCATGGACAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGCCTGCAGCTTAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTaGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTC +
Preference number: 1 (lower is better)
Translates to: GVGVNSRADCTKLDF*MVIFPRNHLEIQAV
Trigger: GACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GTTGGGGAGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTaGAAGAAGCAGATGCTCCAAGCCAATGCTAACAACATGGCACAA +
Preference number: 1 (lower is better)
Translates to: VGERARVGFNISSCL*KKQMLQANANNMAQ
Trigger: TTGTGCCATGTTGTTAGCATTGGCTTGGAGCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCTCCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp TTCCTTCTCCTGCCCGCAAAGCCCTGCCTCTCTCCTGAGTACATATaGCACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTA +
Preference number: 1 (lower is better)
Translates to: FLLLPAKPCLSPEYI*HSMLQDFKADAGIL
Trigger: TAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTCATATGTACTCAGGAGAGAGGCAGGGCTTTGCGGGCAGGAGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp GGATTGAACCTACTGCTGGTTGGTTCTTGCAGAGAACCCTCACCCTaGACAGGAGCTGGGTCAAGTCAGAGAATGGAATCAGTTTCAAGG +
Preference number: 1 (lower is better)
Translates to: GLNLLLVGSCREPSP*TGAGSSQRMESVSR
Trigger: CCTTGAAACTGATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAGAACCAACCAGCAGTAGGTTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp ACATCATCAAGAGCAAACACTAGGACAGAGCTACAACGAGATGGTTaGCAATGGCAGCTGCTCCCTCTGGGTTACTCCTCAATTTGGTGG +
Preference number: 1 (lower is better)
Translates to: TSSRANTRTELQRDG*QWQLLPLGYSSIWW
Trigger: CCACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCTAGTGTTTGCTCTTGATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp TGCCCGCAAAGCCCTGCCTCTCTCCTGAGTACATATGACACTCCATaGTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTT +
Preference number: 1 (lower is better)
Translates to: CPQSPASLLSTYDTP*CKISRQMQVSYGCF
Trigger: AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTCATATGTACTCAGGAGAGAGGCAGGGCTTTGCGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GAGGAAATCCGAATGATCAGGTCTGTGCTGTGGGAAGTCCCTTTTTaGTCCATCTTCCTAAGCCCTGCCTTCCCCAAATATGTTCCTGTC +
Preference number: 1 (lower is better)
Translates to: EEIRMIRSVLWEVPF*SIFLSPAFPKYVPV
Trigger: GACAGGAACATATTTGGGGAAGGCAGGGCTTAGGAAGATGGACCAAAAAGGGACTTCCCACAGCACAGACCTGATCATTCGGATTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp TCAAGAGCAAACACTAGGACAGAGCTACAACGAGATGGTTGCCAATaGCAGCTGCTCCCTCTGGGTTACTCCTCAATTTGGTGGGAAAGA +
Preference number: 1 (lower is better)
Translates to: SRANTRTELQRDGCQ*QLLPLGYSSIWWER
Trigger: TCTTTCCCACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCTAGTGTTTGCTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp AGGATTTATTTGCCTTCCATCTGGGTAGCTGGTGGAGACAACCTTTaGCCACTAGATGGCGACCGCATGTTGATAAGGCAAAGTGCTGAG +
Preference number: 1 (lower is better)
Translates to: RIYLPSIWVAGGDNL*PLDGDRMLIRQSAE
Trigger: CTCAGCACTTTGCCTTATCAACATGCGGTCGCCATCTAGTGGCCAAAGGTTGTCTCCACCAGCTACCCAGATGGAAGGCAAATAAATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp GTACTCCTTCCGGATGTGCAAAGCATACTGATGAAACAGAGTATCTaGAAAGCTGTCCCCAGGAATCACGAAGGCTCAGTCACTGCTGCT +
Preference number: 1 (lower is better)
Translates to: VLLPDVQSILMKQSI*KAVPRNHEGSVTAA
Trigger: AGCAGCAGTGACTGAGCCTTCGTGATTCCTGGGGACAGCTTTTCAGATACTCTGTTTCATCAGTATGCTTTGCACATCCGGAAGGAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp GATTTGGAAATGCTGGAAAGGACCATAGGGACCACCTTGCCCAGTTaGTTAAGGCTGGCTACAGACACCTTCTTTAGAAACCTGGGGTTG +
Preference number: 1 (lower is better)
Translates to: DLEMLERTIGTTLPS*LRLATDTFFRNLGL
Trigger: CAACCCCAGGTTTCTAAAGAAGGTGTCTGTAGCCAGCCTTAATCAACTGGGCAAGGTGGTCCCTATGGTCCTTTCCAGCATTTCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp TCATCATCACACACTACAGACAAGAAATGTTATGGTGAACACAGCTaGAAGTCTACGAGAGGAAGTCAGTCGGGAAGGAAGGGGCGATGG +
Preference number: 1 (lower is better)
Translates to: SSSHTTDKKCYGEHS*KSTRGSQSGRKGRW
Trigger: CCATCGCCCCTTCCTTCCCGACTGACTTCCTCTCGTAGACTTGCAGCTGTGTTCACCATAACATTTCTTGTCTGTAGTGTGTGATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp AGAAATCAGAAACAATGTACTCATACCCTGCCTGGCCATGCTCCCTaGATGAATGGCCCCCAAGGTACCCACAGAACATTAAGCTGGAAA +
Preference number: 1 (lower is better)
Translates to: RNQKQCTHTLPGHAP*MNGPQGTHRTLSWK
Trigger: TTTCCAGCTTAATGTTCTGTGGGTACCTTGGGGGCCATTCATGCAGGGAGCATGGCCAGGCAGGGTATGAGTACATTGTTTCTGATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACTCCTCAATTTaGTGGGAAAGAGACCAAGGTTCACTCGTTTTTCTGAATAGACCT +
Preference number: 1 (lower is better)
Translates to: DGCQWQLLPLGYSSI*WERDQGSLVFLNRP
Trigger: AGGTCTATTCAGAAAAACGAGTGAACCTTGGTCTCTTTCCCACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GCACTAAGCTGGACTTCTGGATGGTCATCTTCCCCAGAAACCATTTaGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGT +
Preference number: 1 (lower is better)
Translates to: ALSWTSGWSSSPETI*KSKQSIPLLHIPPC
Trigger: ACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTCCAGCTTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp GTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTTaGCATCTTGGGCTAGACACTGCCTCAGCAGAAGCTAACAATGTT +
Preference number: 1 (lower is better)
Translates to: VLVKEVGVVAHELCI*HLGLDTASAEANNV
Trigger: AACATTGTTAGCTTCTGCTGAGGCAGTGTCTAGCCCAAGATGGCAAATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp AGGCAGTTCGTTCAGGCCATTATATTTCATTCCCAAAGTTCACGATaGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGG +
Preference number: 1 (lower is better)
Translates to: RQFVQAIIFHSQSSR*TAGWPKGFICLPSG
Trigger: CCCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTTTGGGAATGAAATATAATGGCCTGAACGAACTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp ATTAGTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATaGGCTATGTATTTGCCATCTTGGGCTAGACACTGCCTCAGCAGA +
Preference number: 1 (lower is better)
Translates to: ISYVCIGQGGGSSGT*AMYLPSWARHCLSR
Trigger: TCTGCTGAGGCAGTGTCTAGCCCAAGATGGCAAATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAACTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp GATTCTTATAGCACATCCAGGCTCAGGGAACCTGAGTGGTGTGATTaGTTAGTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCA +
Preference number: 1 (lower is better)
Translates to: DSYSTSRLREPEWCD*LVMSVLVKEVGVVA
Trigger: TGCCACTACTCCCACCTCCTTGACCAATACAGACATAACTAATCAATCACACCACTCAGGTTCCCTGAGCCTGGATGTGCTATAAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 90 bp GTGGAAACTGACCAATTCCCTTCACAAGTAACCAATGAGCAAGGGTaGTCAAGTGAAAAAGGAAGCTTTTGTAAGCCGCCTTGGAGACTC +
Preference number: 1 (lower is better)
Translates to: VETDQFPSQVTNEQG*SSEKGSFCKPPWRL
Trigger: GAGTCTCCAAGGCGGCTTACAAAAGCTTCCTTTTTCACTTGACCACCCTTGCTCATTGGTTACTTGTGAAGGGAATTGGTCAGTTTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp TTTTCTCTCATGGAACGGAACATCACAGACAGGGATAGGCCAGCATaGAACCCAGCCAGCATATGGTTTTGTGTGATTGTTGGAAACCTT +
Preference number: 1 (lower is better)
Translates to: FSLMERNITDRDRPA*NPASIWFCVIVGNL
Trigger: AAGGTTTCCAACAATCACACAAAACCATATGCTGGCTGGGTTTCATGCTGGCCTATCCCTGTCTGTGATGTTCCGTTCCATGAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp CTACTAAGTGGCTGCTTCTGGAGTCTTCTGACCCTAGTGTTGCACTaGTCTCTGAACACAAAGGCAGTTCGTTCAGGCCATTATATTTCA +
Preference number: 1 (lower is better)
Translates to: LLSGCFWSLLTLVLH*SLNTKAVRSGHYIS
Trigger: TGAAATATAATGGCCTGAACGAACTGCCTTTGTGTTCAGAGATCAGTGCAACACTAGGGTCAGAAGACTCCAGAAGCAGCCACTTAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 90 bp CAGTTCATTTCACAGGAAAGGAAATTGGAGTCCAGAGAGGTCAACTaGTGTGACACACAACAGTTCAAATTCCCTACCCCTACTAAAGCC +
Preference number: 1 (lower is better)
Translates to: QFISQERKLESREVN*CDTQQFKFPTPTKA
Trigger: GGCTTTAGTAGGGGTAGGGAATTTGAACTGTTGTGTGTCACAGCAGTTGACCTCTCTGGACTCCAATTTCCTTTCCTGTGAAATGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp ACTCCTCAATTTGGTGGGAAAGAGACCAAGGTTCACTCGTTTTTCTaGATAGACCTTGGAGTTGCCCTAAATAATACACAGCACCGAATG +
Preference number: 1 (lower is better)
Translates to: TPQFGGKETKVHSFF*IDLGVALNNTQHRM
Trigger: CATTCGGTGCTGTGTATTATTTAGGGCAACTCCAAGGTCTATTCAGAAAAACGAGTGAACCTTGGTCTCTTTCCCACCAAATTGAGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp TTCTTTGAAAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTaGGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: FFENVNILEGPCLRY*GIPRGLRLLSMQAL
Trigger: CAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTTTCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
3UTR TCA 90 bp AGTAACAATTTCATCATCACACACTACAGACAAGAAATGTTATGGTaGACACAGCTGCAAGTCTACGAGAGGAAGTCAGTCGGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: SNNFIITHYRQEMLW*TQLQVYERKSVGKE
Trigger: TTCCTTCCCGACTGACTTCCTCTCGTAGACTTGCAGCTGTGTTCACCATAACATTTCTTGTCTGTAGTGTGTGATGATGAAATTGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp ATTGGTAAGGATGACAGGGTCCCTCTTCTTTGGCCAGGGAAACCATaGCATTCACTTTCTTTGCTGTTGTACATCCAATTTCTTTCCTTA +
Preference number: 1 (lower is better)
Translates to: IGKDDRVPLLWPGKP*HSLSLLLYIQFLSL
Trigger: TAAGGAAAGAAATTGGATGTACAACAGCAAAGAAAGTGAATGTCATGGTTTCCCTGGCCAAAGAAGAGGGACCCTGTCATCCTTACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp ATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTaGGATTTGACATCGTTACCTAGCCAAGTTGGGGGTTTAATTCCT +
Preference number: 1 (lower is better)
Translates to: IRINSYPVGTKTRLM*DLTSLPSQVGGLIP
Trigger: AGGAATTAAACCCCCAACTTGGCTAGGTAACGATGTCAAATCTCACATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 90 bp ACTTTCTTTGCTGTTGTACATCCAATTTCTTTCCTTAATCATATCTaGTGCTGGGATGTGGGTAACCCCAAACTGAAGGCAGCTGCTAAA +
Preference number: 1 (lower is better)
Translates to: TFFAVVHPISFLNHI*CWDVGNPKLKAAAK
Trigger: TTTAGCAGCTGCCTTCAGTTTGGGGTTACCCACATCCCAGCATCAGATATGATTAAGGAAAGAAATTGGATGTACAACAGCAAAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCCAGGGCCGCCTGGCCTaGCACCCAGCCGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: SPRPWGAGMSAGLWALPAQGRLA*HPAGSL
Trigger: CAGTGACCCGGCTGGGTGCCAGGCCAGGCGGCCCTG...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCGGCTGCTGCCTTGTCTaGGGTCACCACGGAATGCCC +
Preference number: 2 (lower is better)
Translates to: SPRPWGAGMSAGLWALPAGCCLV*GHHGMP
Trigger: GGGCATTCCGTGGTGACCCCAGACAAGGCAGCAGCC...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CAA 90 bp ATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTaGGAAGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATG +
Preference number: 2 (lower is better)
Translates to: MGDGPGTSRCTRDNP*EARTLMWQWNVNTM
Trigger: CATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCCCTTGTCTGAGGTATTaGGGTATTCCTCGAGGGTTA +
Preference number: 2 (lower is better)
Translates to: SPRPWGAGMSAGLWALPAPCLRY*GIPRGL
Trigger: TAACCCTCGAGGAATACCTCAATACCTCAGACAAGG...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR TCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATGGAAGGGGCGATGGGTaGCGGACCCGGCACTTCGAG +
Preference number: 2 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADGRGDG*RTRHFE
Trigger: CTCGAAGTGCCGGGTCCGTCACCCATCGCCCCTTCC...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCGGCTGTGCACATGACTaGATCTTCCTAGAGGCCGTG +
Preference number: 2 (lower is better)
Translates to: AGLWALPAILLGHLGHGIGCAHD*IFLEAV
Trigger: CACGGCCTCTAGGAAGATTCAGTCATGTGCACAGCC...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR GCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGCCCCCTGCACCCTCTaGAAGGGGACGTGGGCGTCA +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCAPCTL*KGTWAS
Trigger: TGACGCCCACGTCCCCTTGCAGAGGGTGCAGGGGGC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGAGAGAACCCTCACCCTaGACAGGAGCTGGGTCAAGT +
Preference number: 2 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWREPSP*TGAGSS
Trigger: ACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCT...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCACGCCTCTTGAGGAGCTaGCAGCCTCCCCTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPRLLRS*QPPLEN
Trigger: GTTTTCCAGGGGAGGCTGGCAGCTCCTCAAGAGGCG...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGGTTGCCAATGGCAGCTaGTCCCTCTGGGTTACTCCT +
Preference number: 2 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWVANGS*SLWVTP
Trigger: AGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAAC...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGGGACCAGGCTGTCCATaGCTTCCCTGCCCTTTTACT +
Preference number: 2 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWGPGCP*LPCPFT
Trigger: AGTAAAAGGGCAGGGAAGGCATGGACAGCCTGGTCC...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp TATGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACGGAAGGAAGGGGCGATaGGTGACGGACCCGGCACTT +
Preference number: 2 (lower is better)
Translates to: YGPTPFSTPGCQGVKGTYGRKGR*VTDPAL
Trigger: AAGTGCCGGGTCCGTCACCCATCGCCCCTTCCTTCC...GTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GCCTTGTCCATGGGCTGGGAGTATGCTCACCACTCAGTGGAAGATCATGGGCTCTGCTCCCTGCATGAATaGCCCCCAAGGTACCCACAG +
Preference number: 2 (lower is better)
Translates to: ALSMGWEYAHHSVEDHGLCSLHE*PPRYPQ
Trigger: CTGTGGGTACCTTGGGGGCCATTCATGCAGGGAGCA...GAGCCCATGATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCCCATCAAGGCTGCATTaGATTCTCTCCAGTAAGTGT +
Preference number: 2 (lower is better)
Translates to: PRPWGAGMSAGLWALPAIPSRLH*ILSSKC
Trigger: ACACTTACTGGAGAGAATCCAATGCAGCCTTGATGG...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR TCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACAGACGAAGGACTACCTaGGGGAGTAGGATGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYRRRTT*GSRMGW
Trigger: CCAGCCCATCCTACTCCCTCAGGTAGTCCTTCGTCT...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGTCGTCTACCGCCCCCTaGACCCTCTGCAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWSSTAP*TLCKGT
Trigger: CGTCCCCTTGCAGAGGGTGCAGGGGGCGGTAGACGA...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCACCTCCAGGGCAATCTaGCAAGGGGAGCAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCTSRAI*QGEQGS
Trigger: GCTGCCCTGCTCCCCTTGCCAGATTGCCCTGGAGGT...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 90 bp GTCTCACTGCATCTCCTCCCACGTCAGAACTTGAGTACTGGGTCTTaGCAGCTCAGAGCATTCCTCCCTTCCTTCTCCTGCCCGCAAAGC +
Preference number: 2 (lower is better)
Translates to: VSLHLLPRQNLSTGS*QLRAFLPSFSCPQS
Trigger: GCTTTGCGGGCAGGAGAAGGAAGGGAGGAATGCTCTGAGCTGCAAAGACCCAGTACTCAAGTTCTGACGTGGGAGGAGATGCAGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 90 bp CATCCTGCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTaGGCTGTCCTATCTAGAGACCTGGAGGCCCAAACTAGAGCACTC +
Preference number: 2 (lower is better)
Translates to: HPAGTSWPWYQCLRA*AVLSRDLEAQTRAL
Trigger: GAGTGCTCTAGTTTGGGCCTCCAGGTCTCTAGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGCAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR TCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCCACACACTTGGAGCATaGGCTGGGCACAAGATGGGG +
Preference number: 2 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSHTLGA*AGHKMG
Trigger: CCCCATCTTGTGCCCAGCTCATGCTCCAAGTGTGTG...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATTGCCAGGGGTGTCACTaGAGTTCTGACAGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHCQGCH*SSDSVS
Trigger: GGACACACTGTCAGAACTTCAGTGACACCCCTGGCA...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCGCCATGCTCCCTGCATaGATGGCCCCCAAGGTACCC +
Preference number: 2 (lower is better)
Translates to: KTKAALNICSAINASCCPAMLPA*MAPKVP
Trigger: GGGTACCTTGGGGGCCATTCATGCAGGGAGCATGGC...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCCGGTACCTCCAAACTTaGCGAGCAGACCTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCRYLQT*RADLEP
Trigger: GGGCTCCAGGTCTGCTCGTCAAGTTTGGAGGTACCG...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGGTACGACCTGCCCTGTaGGGGCGGCTATCGACACAG +
Preference number: 2 (lower is better)
Translates to: AQMGLTELYTWDGPWTELVRPAL*GRLSTQ
Trigger: CTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTAC...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTGCCATCATGGCTCACTaGAGCTCCAACCTCTTGGGT +
Preference number: 2 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSAIMAH*SSNLLG
Trigger: ACCCAAGAGGTTGGAGCTGCAGTGAGCCATGATGGC...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGCCAGAAGGCCTGGTCTaGGTCACCGCTCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: AQMGLTELYTWDGPWTELPEGLV*VTALPP
Trigger: AGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGG...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 90 bp ACTCAGCCAGGACACAGTGGGATTGAACCTACTGCTGGTTGGTTCTaGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: TQPGHSGIEPTAGWF*QRTLTLNRSWVKSE
Trigger: CTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAGAACCAACCAGCAGTAGGTTCAATCCCACTGTGTCCTGGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGACTCAGGATCAAAGCTaGTGGTGCATCCAAGACACA +
Preference number: 2 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWTQDQS*WCIQDT
Trigger: TGTGTCTTGGATGCACCATCAGCTTTGATCCTGAGT...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGCGAGAATGGGGATTCTaGTTCAGCCTTGTACAGACT +
Preference number: 2 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWREWGF*FSLVQT
Trigger: AGTCTGTACAAGGCTGAATCAGAATCCCCATTCTCG...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTGAGTCTGAGTACAAATaGATAGACACACACTTGGAG +
Preference number: 2 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTESEYK*IDTHLE
Trigger: CTCCAAGTGTGTGTCTATCCATTTGTACTCAGACTC...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGATTCTTGGTAGAATCTaGACTCCCCCAACTCTCCAG +
Preference number: 2 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWILGRI*TPPTLQ
Trigger: CTGGAGAGTTGGGGGAGTCCAGATTCTACCAAGAAT...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCGCCTCCCCCATCCCATaGTGGTTCTGGGCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPASPIP*WFWAKD
Trigger: GTCCTTGGCCCAGAACCACCATGGGATGGGGGAGGC...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGCAAGATCTAAACCCATaGCTCCCTGTTTCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWQDLNP*LPVSRA
Trigger: AGCCCTTGAAACAGGGAGCCATGGGTTTAGATCTTG...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATCCCGGCACTTCGAGGTaGACCCGGGACAACCCGTTG +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYPGTSR*TRDNPL
Trigger: CAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGG...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp TCTACTTCCCCCAACAGCTTCTCGTCCATTAGTAACCTGCTGCAGTGCCACATATCCCATAAATGGACATaGAGCCAAGGGCAGGGCCGC +
Preference number: 2 (lower is better)
Translates to: STSPNSFSSISNLLQCHISHKWT*SQGQGR
Trigger: GCGGCCCTGCCCTTGGCTGCATGTCCATTTATGGGA...TATGTGGCACTGCAGCAGGTTACTAATGGACGAGAAGCTGTTGGGGGAAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTGCCTTGTCCATGGGCTaGGAGTATGCTCACCACTCA +
Preference number: 2 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPALSMG*EYAHHS
Trigger: TGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCGAGATGGTTGCCAATaGCAGCTGCTCCCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTRDGCQ*QLLPLG
Trigger: ACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCG...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCAGTCTTCAGGCAAAGTaGCTGCAAAGTTATACCAAG +
Preference number: 2 (lower is better)
Translates to: AGLWALPAILLGHLGHGISLQAK*LQSYTK
Trigger: CTTGGTATAACTTTGCAGCCACTTTGCCTGAAGACT...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR TCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATGTGTCACTGAAGTTCTaGCAGTGTGTCCACAGGCAC +
Preference number: 2 (lower is better)
Translates to: LAENPHPEQELGQVREWNVSLKF*QCVHRH
Trigger: GTGCCTGTGGACACACTGTCAGAACTTCAGTGACAC...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGCTGCCCTAAACATATaGAGCGCGATCAATGCCTCC +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCAALNI*SAINAS
Trigger: GGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTTACTCATACCCTGCCTaGCCATGCTCCCTGCATGAA +
Preference number: 2 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPYSYPA*PCSLHE
Trigger: TTCATGCAGGGAGCATGGCCAGGCAGGGTATGAGTA...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCCCAATGCTCCTGGTTaGGGATCTGAGCCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTPNAPG*GSEPLR
Trigger: TCTGAGAGGCTCAGATCCCCAACCAGGAGCATTGGG...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCCATCTGGGTAGCTGGTaGAGACAACCTTTGGCCACT +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCHLGSW*RQPLAT
Trigger: AGTGGCCAAAGGTTGTCTCCACCAGCTACCCAGATG...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCCAGGACAGGATAAGGTaGACCAGAGGCCAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLQDRIR*TRGQKR
Trigger: TCTCTTCTGGCCTCTGGTCCACCTTATCCTGTCCTG...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CAA 90 bp TTCCCAAAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTaGCCTTCCATCTGGGTAGCTGGTGGAGACAACCTTTGGCCACTA +
Preference number: 2 (lower is better)
Translates to: FPKFTMDSRVAERIY*PSIWVAGGDNLWPL
Trigger: TAGTGGCCAAAGGTTGTCTCCACCAGCTACCCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 90 bp GCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCCCTaGAGATTTCCCACCTGTTTCCATTGGAATCAGAACATCCCTCAA +
Preference number: 2 (lower is better)
Translates to: AVYSPAAHTTLSTLP*RFPTCFHWNQNIPQ
Trigger: TTGAGGGATGTTCTGATTCCAATGGAAACAGGTGGGAAATCTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCAAGAGGAAATCCGAATaGTCAGGTCTGTGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCKRKSE*SGLCCG
Trigger: CCCACAGCACAGACCTGATCATTCGGATTTCCTCTT...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp TCTACTTCCCCCAACAGCTTCTCGTCCATTAGTAACCTGCTGCAGTGCCACATAAGCTGGCTGTGCACATaGCTGAATCTTCCTAGAGGC +
Preference number: 2 (lower is better)
Translates to: STSPNSFSSISNLLQCHISWLCT*LNLPRG
Trigger: GCCTCTAGGAAGATTCAGTCATGTGCACAGCCAGCT...TATGTGGCACTGCAGCAGGTTACTAATGGACGAGAAGCTGTTGGGGGAAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR GCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCATATGGTGAACACAGCTaGAAGTCTACGAGAGGAAGT +
Preference number: 2 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPYGEHS*KSTRGS
Trigger: ACTTCCTCTCGTAGACTTGCAGCTGTGTTCACCATA...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGCATGGGCTGGGAGTATaGTCACCACTCAGTGGAAGA +
Preference number: 2 (lower is better)
Translates to: AQMGLTELYTWDGPWTELHGLGV*SPLSGR
Trigger: TCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATG...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATTATGTCATGTCCCAATaGCACGCTCAGGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: LAENPHPEQELGQVREWNYVMSQ*HAQVSA
Trigger: AGCAGAGACCTGAGCGTGGCATTGGGACATGACATA...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCCCCCAGTGGGCCTACTaGACATGTCTAGGAGAAATC +
Preference number: 2 (lower is better)
Translates to: KTKAALNICSAINASCCPPQWAY*TCLGEI
Trigger: GATTTCTCCTAGACATGTGCAGTAGGCCCACTGGGG...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGTGTCCATGCCTTCCCTaGCCTTTTACTCACCACTGC +
Preference number: 2 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTCPCLP*PFTHHC
Trigger: GCAGTGGTGAGTAAAAGGGCAGGGAAGGCATGGACA...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATACACTAATGTGGCAGTaGAACGTCAACACCATGGAA +
Preference number: 2 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHTLMWQ*NVNTME
Trigger: TTCCATGGTGTTGACGTTCCACTGCCACATTAGTGT...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGAGCAGGGCAGCTCAGTaGCAAACACCTCATGACAGT +
Preference number: 2 (lower is better)
Translates to: AQMGLTELYTWDGPWTELSRAAQ*QTPHDS
Trigger: ACTGTCATGAGGTGTTTGCCACTGAGCTGCCCTGCT...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp TATGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACTGGGAAGTCCCTTTTTaGTCCATCTTCCTAAGCCCT +
Preference number: 2 (lower is better)
Translates to: YGPTPFSTPGCQGVKGTYWEVPF*SIFLSP
Trigger: AGGGCTTAGGAAGATGGACCAAAAAGGGACTTCCCA...GTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 90 bp CCTTCGGTAACCAGAGCCCCCGAGAATGGGGATTCTGATTCAGCCTaGTACAGACTGAGGAAGGAGATGGAAGAATTCCACTTAGTGGTT +
Preference number: 2 (lower is better)
Translates to: PSVTRAPENGDSDSA*YRLRKEMEEFHLVV
Trigger: AACCACTAAGTGGAATTCTTCCATCTCCTTCCTCAGTCTGTACAAGGCTGAATCAGAATCCCCATTCTCGGGGGCTCTGGTTACCGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCAGGACACAGTGGGATTaGACCTACTGCTGGTTGGTT +
Preference number: 2 (lower is better)
Translates to: KTKAALNICSAINASCCPRTQWD*TYCWLV
Trigger: AACCAACCAGCAGTAGGTTCAATCCCACTGTGTCCT...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATGTAGAGACTACTCGATaGCCTTGGCAGGCAGCGTCC +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYVETTR*PWQAAS
Trigger: GGACGCTGCCTGCCAAGGGCATCGAGTAGTCTCTAC...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGGAACGTCAACACCATaGAAACTCACAGACAGAAGC +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCGTSTP*KLTDRS
Trigger: GCTTCTGTCTGTGAGTTTCCATGGTGTTGACGTTCC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATAGACAAGGCAGGGCTTaGCAGATACGGCCCGGAAAC +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYRQGRA*QIRPGN
Trigger: GTTTCCGGGCCGTATCTGCCAAGCCCTGCCTTGTCT...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATACTTGGAGCATGAGCTaGGCACAAGATGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYTWSMS*AQDGGS
Trigger: GGAGCCCCCATCTTGTGCCCAGCTCATGCTCCAAGT...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATCCCAGGCTGAAGTGTTaGGGTTTTCTCAAAGTGCTT +
Preference number: 2 (lower is better)
Translates to: LAENPHPEQELGQVREWNPRLKC*GFLKVL
Trigger: AAGCACTTTGAGAAAACCCCAACACTTCAGCCTGGG...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCACTGATTCCCATAAATaGACATGCAGCCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLTDSHK*TCSQGQ
Trigger: CTGCCCTTGGCTGCATGTCCATTTATGGGAATCAGT...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CAA 90 bp AGAGGAAATCCGAATGATCAGGTCTGTGCTGTGGGAAGTCCCTTTTaGGTCCATCTTCCTAAGCCCTGCCTTCCCCAAATATGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: RGNPNDQVCAVGSPF*VHLPKPCLPQICSC
Trigger: ACAGGAACATATTTGGGGAAGGCAGGGCTTAGGAAGATGGACCAAAAAGGGACTTCCCACAGCACAGACCTGATCATTCGGATTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTaGTCCACGCTCCCCTTGAGATTTCCCACCTGTTTCCATTGGAAT +
Preference number: 2 (lower is better)
Translates to: HLEIQAVYSPAAHTT*STLPLRFPTCFHWN
Trigger: ATTCCAATGGAAACAGGTGGGAAATCTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 90 bp TGCACTAAGCTGGACTTCTGGATGGTCATCTTCCCCAGAAACCATTaGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTG +
Preference number: 2 (lower is better)
Translates to: CTKLDFWMVIFPRNH*EIQAVYSPAAHTTL
Trigger: CAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTCCAGCTTAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTACACATGCCAGGGCTTaGATTCACCTGATGCTGGTG +
Preference number: 2 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFTHARA*IHLMLV
Trigger: CACCAGCATCAGGTGAATTCAAGCCCTGGCATGTGT...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCAAGCTGGAAATGGCTTTaGCATCACTTAAGAACACAA +
Preference number: 2 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPSWKWL*HHLRTQ
Trigger: TTGTGTTCTTAAGTGATGTCAAAGCCATTTCCAGCT...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGCTGTACCATCAAGGCTaGATTGGATTCTCTCCAGTA +
Preference number: 2 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMLYHQG*IGFSPV
Trigger: TACTGGAGAGAATCCAATGCAGCCTTGATGGTACAG...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTGGTTACTCCTCAATTTaGTGGGAAAGAGACCAAGGT +
Preference number: 2 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPGYSSI*WERDQG
Trigger: ACCTTGGTCTCTTTCCCACCAAATTGAGGAGTAACC...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGCTCAAAGCAGCTTTTTaGTTGAGGGGGCAAGTTGTG +
Preference number: 2 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWLKAAF*LRGQVV
Trigger: CACAACTTGCCCCCTCAACCAAAAAGCTGCTTTGAG...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 90 bp ACCACAAACACAGCCTTACACTCACGCACTCAGGCCGTAGTTACCTaGTTAAGCTTCCTAATAAATAATGCCCCCTACAGTAGTACCCCC +
Preference number: 2 (lower is better)
Translates to: TTNTALHSRTQAVVT*LSFLINNAPYSSTP
Trigger: GGGGGTACTACTGTAGGGGGCATTATTTATTAGGAAGCTTAACAAGGTAACTACGGCCTGAGTGCGTGAGTGTAAGGCTGTGTTTGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCAGGTACTCAAGAGTCTaGGTACAAATGGATAGACAC +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCRYSRV*VQMDRH
Trigger: GTGTCTATCCATTTGTACTCAGACTCTTGAGTACCT...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCGTTCACTCGTTTTTCTaGATAGACCTTGGAGTTGCC +
Preference number: 2 (lower is better)
Translates to: KTKAALNICSAINASCCPVHSFF*IDLGVA
Trigger: GGCAACTCCAAGGTCTATTCAGAAAAACGAGTGAAC...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCTACATCCTCTGGGGCTaGTTTTGCTTCACAGTTAGG +
Preference number: 2 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPYILWG*FCFTVR
Trigger: CCTAACTGTGAAGCAAAATCAGCCCCAGAGGATGTA...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCATCAATGCCTCCTGTTaGCCCATATGTTTTACAATC +
Preference number: 2 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSINASC*PICFTI
Trigger: GATTGTAAAACATATGGGGCAACAGGAGGCATTGAT...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATGCGAGGACACTAATGTaGCAGTGGAACGTCAACACC +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYARTLM*QWNVNT
Trigger: GGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGC...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACAAAGCAAAGCCCAATTaGAGTGTTTTCTCAATTGGA +
Preference number: 2 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYKAKPN*SVFSIG
Trigger: TCCAATTGAGAAAACACTCCAATTGGGCTTTGCTTT...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGTGGATCAGACATTTTTaGAAAACACCAGCACGGCAC +
Preference number: 2 (lower is better)
Translates to: AQMGLTELYTWDGPWTELWIRHF*KTPARH
Trigger: GTGCCGTGCTGGTGTTTTCCAAAAATGTCTGATCCA...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGCATGAGCTATGTATTTaGCATCTTGGGCTAGACACT +
Preference number: 2 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWHELCI*HLGLDT
Trigger: AGTGTCTAGCCCAAGATGGCAAATACATAGCTCATG...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGAACCCAGCCAGCATATaGTTTTGTGTGATTGTTGGA +
Preference number: 2 (lower is better)
Translates to: AQMGLTELYTWDGPWTELNPASI*FCVIVG
Trigger: TCCAACAATCACACAAAACCATATGCTGGCTGGGTT...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATCTACAGCAAGCTTTATaGCGATCACATGTAAACATC +
Preference number: 2 (lower is better)
Translates to: LAENPHPEQELGQVREWNLQQAL*RSHVNI
Trigger: GATGTTTACATGTGATCGCCATAAAGCTTGCTGTAG...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGCTTGACGAGCAGACCTaGAGCCCATCTGTGTGTAAA +
Preference number: 2 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMLDEQT*SPSVCK
Trigger: TTTACACACAGATGGGCTCCAGGTCTGCTCGTCAAG...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTCCTTGTCTGAGGTATTaGGGTATTCCTCGAGGGTTA +
Preference number: 2 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIPCLRY*GIPRGL
Trigger: TAACCCTCGAGGAATACCTCAATACCTCAGACAAGG...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGTGTCCTAGGTTAATCTaGCATGAAAGGACAGCTTTA +
Preference number: 2 (lower is better)
Translates to: AQMGLTELYTWDGPWTELCPRLI*HERTAL
Trigger: TAAAGCTGTCCTTTCATGTCAGATTAACCTAGGACA...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCTGGCTTACAGTTAAGTaGCTTACTCTACAAACTCAT +
Preference number: 2 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCWLTVK*LTLQTH
Trigger: ATGAGTTTGTAGAGTAAGTCACTTAACTGTAAGCCA...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGGGAGTTTTCTCTCATaGAACGGAACATCACAGACA +
Preference number: 2 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFGSFLS*NGTSQT
Trigger: TGTCTGTGATGTTCCGTTCCATGAGAGAAAACTCCC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATTCAGAACTTGAGTACTaGGTCTTTGCAGCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYSELEY*VFAAQS
Trigger: GCTCTGAGCTGCAAAGACCCAGTACTCAAGTTCTGA...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTTCCCGAGGAACCCTaGTGTATGAAAGAAATCAGA +
Preference number: 2 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFFPEEP*CMKEIR
Trigger: TCTGATTTCTTTCATACATCAGGGTTCCTCGGGAAA...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTAGAGGTCAACTGCTGTaGCACACAACAGTTCAAATT +
Preference number: 2 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIRGQLL*HTTVQI
Trigger: AATTTGAACTGTTGTGTGTCACAGCAGTTGACCTCT...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCAAATGTACTCATACCCTaGCTGGCCATGCTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: NVETCLISSFHRKGNWSPNVLIP*LAMLPA
Trigger: TGCAGGGAGCATGGCCAGGCAGGGTATGAGTACATT...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATGATGCAGGTATCTTATaGGTGCTTTTTGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYDAGIL*VLFDSK
Trigger: CTTTGAGTCAAAAAGCACCCATAAGATACCTGCATC...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR TCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATAAGACAAGGTTAATGTaGGATTTGACATCGTTACCT +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYKTRLM*DLTSLP
Trigger: AGGTAACGATGTCAAATCTCACATTAACCTTGTCTT...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR GCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATGACATTCACTTTCTTTaGTGTTGTACATCCAATTTC +
Preference number: 2 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYDIHFL*CCTSNF
Trigger: GAAATTGGATGTACAACAGCAAAGAAAGTGAATGTC...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CTGCAGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTaGACTGTGGGCACTGCCTGCCATCCTGCTGGGACA +
Preference number: 3 (lower is better)
Translates to: LQPKALGSWDER*TVGTACHPAGT
Trigger: TGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 72 bp ACCGTGGAGTGGCTGCAGCCCAAGGCCTTGGGGAGCTaGGATGAGCGCTGGACTGTGGGCACTGCCTGCCAT +
Preference number: 3 (lower is better)
Translates to: TVEWLQPKALGS*DERWTVGTACH
Trigger: ATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAGCCACTCCACGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR TCA 72 bp CGAGAGGAAGTCAGTCGGGAAGGAAGGGGCGATGGGTaGCGGACCCGGCACTTCGAGGTGCACCCGGGACAA +
Preference number: 3 (lower is better)
Translates to: REEVSREGRGDG*RTRHFEVHPGQ
Trigger: TTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCGCCCCTTCCTTCCCGACTGACTTCCTCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp GGCAGGGCCGCCTGGCCTGGCACCCAGCCGGGTCACTaGCACTCAGTCCTGTACCATCAAGGCTGCATTGGA +
Preference number: 3 (lower is better)
Translates to: GRAAWPGTQPGH*HSVLYHQGCIG
Trigger: TCCAATGCAGCCTTGATGGTACAGGACTGAGTGTCAGTGACCCGGCTGGGTGCCAGGCCAGGCGGCCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR GCA 72 bp GAAGGGGCGATGGGTGACGGACCCGGCACTTCGAGGTaGACCCGGGACAACCCGTTGGAAGCGAGGACACTA +
Preference number: 3 (lower is better)
Translates to: EGAMGDGPGTSR*TRDNPLEARTL
Trigger: TAGTGTCCTCGCTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCGCCCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp TCTACGAGAGGAAGTCAGTCGGGAAGGAAGGGGCGATaGGTGACGGACCCGGCACTTCGAGGTGCACCCGGG +
Preference number: 3 (lower is better)
Translates to: STRGSQSGRKGR*VTDPALRGAPG
Trigger: CCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCGCCCCTTCCTTCCCGACTGACTTCCTCTCGTAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTaGGCACTGCCTGCCATCCTGCTGGGACATCTTGGC +
Preference number: 3 (lower is better)
Translates to: PRPWGAGMSAGL*ALPAILLGHLG
Trigger: GCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CAA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCGGGGGTTTCACCATGTaGGCCACGATGGTCTCGATC +
Preference number: 3 (lower is better)
Translates to: SPRPWGAGMSAGLWALPAGGFTM*ATMVSI
Trigger: GATCGAGACCATCGTGGCCAACATGGTGAAACCCCC...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR GCA 72 bp GGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTaGCATCCTGCTGGGACATCTTGGCCATGGTATCAG +
Preference number: 3 (lower is better)
Translates to: GSWDERWTVGTA*HPAGTSWPWYQ
Trigger: CTGATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 72 bp GTGTCTTGTAGCCGGCTCAGGGCCTCCCCCATCCCATaGTGGTTCTGGGCCAAGGACACATCCATGCATGTG +
Preference number: 3 (lower is better)
Translates to: VSCSRLRASPIP*WFWAKDTSMHV
Trigger: CACATGCATGGATGTGTCCTTGGCCCAGAACCACCATGGGATGGGGGAGGCCCTGAGCCGGCTACAAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp ACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTaGCTCCTCACTGGTAACCGGACCTCCCACAGTCAT +
Preference number: 3 (lower is better)
Translates to: TKNQKAWSGSPL*LLTGNRTSHSH
Trigger: ATGACTGTGGGAGGTCCGGTTACCAGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp AAACACCAGCACGGCACAGAAACGGACAGTACGACCTaGCCTGTGCGGGCGGCTATCGACACAGTCTACAGC +
Preference number: 3 (lower is better)
Translates to: KHQHGTETDSTT*PVRAAIDTVYS
Trigger: GCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp TCTATACCTGGGATGGGCCATGGACTGAGCTGTCCATaGAGAAGGACCAGGCTGTCCATGCCTTCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: SIPGMGHGLSCP*RRTRLSMPSLP
Trigger: GGGCAGGGAAGGCATGGACAGCCTGGTCCTTCTGCATGGACAGCTCAGTCCATGGCCCATCCCAGGTATAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp GAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTaGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTT +
Preference number: 3 (lower is better)
Translates to: EPNLLSKRQGRA*QIRPGNGRPRF
Trigger: AAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CTACTACGGAAGCACGGGACCAAGAACCAGAAGGCCTaGTCTGGGTCACCGCTCTGCCTCCTCACTGGTAAC +
Preference number: 3 (lower is better)
Translates to: LLRKHGTKNQKA*SGSPLCLLTGN
Trigger: GTTACCAGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTGCTTCCGTAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp ACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTaGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTC +
Preference number: 3 (lower is better)
Translates to: TVGTACHPAGTS*PWYQCLRALAV
Trigger: GACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR TCA 72 bp GTAGCCACGGTTCTGCCAGCTGGCTGTGCACATGACTaGATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTC +
Preference number: 3 (lower is better)
Translates to: VATVLPAGCAHD*IFLEAVGGWIL
Trigger: GAGAATCCAGCCTCCCACGGCCTCTAGGAAGATTCAGTCATGTGCACAGCCAGCTGGCAGAACCGTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR GCA 72 bp AGCACGGCACAGAAACGGACAGTACGACCTGCCCTGTaGGGGCGGCTATCGACACAGTCTACAGCAAGCTTT +
Preference number: 3 (lower is better)
Translates to: STAQKRTVRPAL*GRLSTQSTASF
Trigger: AAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp GGAGGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTaGACTAAGCTGGACTTCTGGATGGTCATCTTCCCC +
Preference number: 3 (lower is better)
Translates to: GGEGVGVNSRAD*TKLDFWMVIFP
Trigger: GGGGAAGATGACCATCCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATGCTACAACGAGATGGTaGCCAATGGCAGCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHATTRW*PMAAAP
Trigger: GGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGC...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp ACTGGTAACCGGACCTCCCACAGTCATTTCGCCTCTTaGGGAGCTGCCAGCCTCCCCTGGAAAACAGGAATG +
Preference number: 3 (lower is better)
Translates to: TGNRTSHSHFAS*GAASLPWKTGM
Trigger: CATTCCTGTTTTCCAGGGGAGGCTGGCAGCTCCTCAAGAGGCGAAATGACTGTGGGAGGTCCGGTTACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp CTGTCTGTACCGCTGCCAGGGGTGTCACTGAAGTTCTaGCAGTGTGTCCACAGGCACAGACAAACCGCAGGA +
Preference number: 3 (lower is better)
Translates to: LSVPLPGVSLKF*QCVHRHRQTAG
Trigger: TCCTGCGGTTTGTCTGTGCCTGTGGACACACTGTCAGAACTTCAGTGACACCCCTGGCAGCGGTACAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp CCATCCCATGGTGGTTCTGGGCCAAGGACACATCCATaGATGTGGGTTTCCAACTCTGCAGCTCCCCTCCAT +
Preference number: 3 (lower is better)
Translates to: PSHGGSGPRTHP*MWVSNSAAPLH
Trigger: ATGGAGGGGAGCTGCAGAGTTGGAAACCCACATGCATGGATGTGTCCTTGGCCCAGAACCACCATGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp TCCCCTAGCCCTGACTTTAGGTATGTCATGTCCCAATaGCACGCTCAGGTCTCTGCTCAAGGGCCAACGTCT +
Preference number: 3 (lower is better)
Translates to: SPSPDFRYVMSQ*HAQVSAQGPTS
Trigger: AGACGTTGGCCCTTGAGCAGAGACCTGAGCGTGGCATTGGGACATGACATACCTAAAGTCAGGGCTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp CCCTGTCGCAGAGTCAGGGAAAGCCCTGGCTCCTATTaGTCAGAATTCTCTAGGCTGTGTGGTCACACCAAG +
Preference number: 3 (lower is better)
Translates to: PCRRVRESPGSY*SEFSRLCGHTK
Trigger: CTTGGTGTGACCACACAGCCTAGAGAATTCTGAGCAATAGGAGCCAGGGCTTTCCCTGACTCTGCGACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp ACCCCTACTAAAGCCTGTCTCTTCCGGCCTTGTCCATaGGCTGGGAGTATGCTCACCACTCAGTGGAAGATC +
Preference number: 3 (lower is better)
Translates to: TPTKACLFRPCP*AGSMLTTQWKI
Trigger: GATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGCCGGAAGAGACAGGCTTTAGTAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CAGCCAGGACACAGTGGGATTGAACCTACTGCTGGTTaGTTCTTGCAGAGAACCCTCACCCTGAACAGGAGC +
Preference number: 3 (lower is better)
Translates to: QPGHSGIEPTAG*FLQRTLTLNRS
Trigger: GCTCCTGTTCAGGGTGAGGGTTCTCTGCAAGAACCAACCAGCAGTAGGTTCAATCCCACTGTGTCCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp GGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTaGGGTGTGGGGATGGAAGCTATGTCCACAAGGCGC +
Preference number: 3 (lower is better)
Translates to: GKVAAKLYQAAH*GVGMEAMSTRR
Trigger: GCGCCTTGTGGACATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 72 bp TGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTaGAATCTGGGCATGGGGGTGAAGAGGCAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: CFSLTQEGPLLN*NLGMGVKRQGR
Trigger: TCTTCCCTGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CAA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGGAGACAAGGCAGGGCTaGGCAGATACGGCCCGGAAA +
Preference number: 3 (lower is better)
Translates to: AQMGLTELYTWDGPWTELETRQG*ADTARK
Trigger: TTTCCGGGCCGTATCTGCCAAGCCCTGCCTTGTCTC...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp CTAACAACATGGCACAAGGAGGCGAGGGGGTGGGTGTaGATTCCAGAGCAGACTGCACTAAGCTGGACTTCT +
Preference number: 3 (lower is better)
Translates to: LTTWHKEARGWV*IPEQTALSWTS
Trigger: AGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCCTCCTTGTGCCATGTTGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp ACCCGGGACAACCCGTTGGAAGCGAGGACACTAATGTaGCAGTGGAACGTCAACACCATGGAAACTCACAGA +
Preference number: 3 (lower is better)
Translates to: TRDNPLEARTLM*QWNVNTMETHR
Trigger: TCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCTTCCAACGGGTTGTCCCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CTATGGCTTAGATCTGTCCCGGGGAGCTGGTCTTCTTaGATAAGGCAACTCAGCCAGGACACAGTGGGATTG +
Preference number: 3 (lower is better)
Translates to: LWLRSVPGSWSS*IRQLSQDTVGL
Trigger: CAATCCCACTGTGTCCTGGCTGAGTTGCCTTATCCAAGAAGACCAGCTCCCCGGGACAGATCTAAGCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp AGTGTCTCAGGGCCTTGGCTGTCCTATCTAGAGACCTaGAGGCCCAAACTAGAGCACTCCAGAGCCTTTCTA +
Preference number: 3 (lower is better)
Translates to: SVSGPWLSYLET*RPKLEHSRAFL
Trigger: TAGAAAGGCTCTGGAGTGCTCTAGTTTGGGCCTCCAGGTCTCTAGATAGGACAGCCAAGGCCCTGAGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CCA 72 bp GGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTaGCTGTCCTATCTAGAGACCTGGAGGCCCAAACTA +
Preference number: 3 (lower is better)
Translates to: GHLGHGISVSGP*LSYLETWRPKL
Trigger: TAGTTTGGGCCTCCAGGTCTCTAGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CAA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCCAGGGTCCCTCTTCTTaGGCCAGGGAAACCATGACA +
Preference number: 3 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCQGPSS*ARETMT
Trigger: TGTCATGGTTTCCCTGGCCAAAGAAGAGGGACCCTG...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp GTGCCCAATTTAGCCGAACTCACCTCTACCAGTCCCTaGAACGGTGTCTTTACCCCAGCTACTACGGAAGCA +
Preference number: 3 (lower is better)
Translates to: VPNLAELTSTSP*NGVFTPATTEA
Trigger: TGCTTCCGTAGTAGCTGGGGTAAAGACACCGTTTCAGGGACTGGTAGAGGTGAGTTCGGCTAAATTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp GCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTaGTGGTGCATCCAAGACACATGCCAGGGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: AQTNRRTTQDQS*WCIQDTCQGLN
Trigger: ATTCAAGCCCTGGCATGTGTCTTGGATGCACCATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp CCCCTGCTGCACATACCACCTTGTCCACGCTCCCCTTaGGATTTCCCACCTGTTTCCATTGGAATCAGAACA +
Preference number: 3 (lower is better)
Translates to: PLLHIPPCPRSP*DFPPVSIGIRT
Trigger: TGTTCTGATTCCAATGGAAACAGGTGGGAAATCTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp GGGAAGGCAGTGAGCAACTTACAAAGACCGGATGGTTaGAGAATCTGCCACTATGAGTGGGCACCGTGGAGT +
Preference number: 3 (lower is better)
Translates to: GKAVSNLQRPDG*RICHYEWAPWS
Trigger: ACTCCACGGTGCCCACTCATAGTGGCAGATTCTTCAACCATCCGGTCTTTGTAAGTTGCTCACTGCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR GCA 72 bp GGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTaGTCCCTCTGGGTTACTCCTCAATTTGGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: GQSYNEMVANGS*SLWVTPQFGGK
Trigger: TTTCCCACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp AGAGCAAACACTAGGACAGAGCTACAACGAGATGGTTaGCAATGGCAGCTGCTCCCTCTGGGTTACTCCTCA +
Preference number: 3 (lower is better)
Translates to: RANTRTELQRDG*QWQLLPLGYSS
Trigger: TGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCTAGTGTTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CTCACTGCATCTCCTCCCACGTCAGAACTTGAGTACTaGGTCTTTGCAGCTCAGAGCATTCCTCCCTTCCTT +
Preference number: 3 (lower is better)
Translates to: LTASPPTSELEY*VFAAQSIPPFL
Trigger: AAGGAAGGGAGGAATGCTCTGAGCTGCAAAGACCCAGTACTCAAGTTCTGACGTGGGAGGAGATGCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp ATGGGATTAACTGAACTCTATACCTGGGATGGGCCATaGACTGAGCTGTCCATGCAGAAGGACCAGGCTGTC +
Preference number: 3 (lower is better)
Translates to: MGLTELYTWDGP*TELSMQKDQAV
Trigger: GACAGCCTGGTCCTTCTGCATGGACAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CATTTACCCGGTACCTCCAAACTTGACGAGCAGACCTaGAGCCCATCTGTGTGTAAAAACCCCTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: HLPGTSKLDEQT*SPSVCKNPSGT
Trigger: AGTCCCTGAGGGGTTTTTACACACAGATGGGCTCCAGGTCTGCTCGTCAAGTTTGGAGGTACCGGGTAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp TATTGTTTAATGCAAAGTCAGCCTTTGCCTACTTCCTaGGTGTCTTGTAGCCGGCTCAGGGCCTCCCCCATC +
Preference number: 3 (lower is better)
Translates to: YCLMQSQPLPTS*VSCSRLRASPI
Trigger: GATGGGGGAGGCCCTGAGCCGGCTACAAGACACCCAGGAAGTAGGCAAAGGCTGACTTTGCATTAAACAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp TTGCCTTCCATCTGGGTAGCTGGTGGAGACAACCTTTaGCCACTAGATGGCGACCGCATGTTGATAAGGCAA +
Preference number: 3 (lower is better)
Translates to: LPSIWVAGGDNL*PLDGDRMLIRQ
Trigger: TTGCCTTATCAACATGCGGTCGCCATCTAGTGGCCAAAGGTTGTCTCCACCAGCTACCCAGATGGAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATGTGGGAAGTCCCTTTTaGGTCCATCTTCCTAAGCCC +
Preference number: 3 (lower is better)
Translates to: LAENPHPEQELGQVREWNVGSPF*VHLPKP
Trigger: GGGCTTAGGAAGATGGACCAAAAAGGGACTTCCCAC...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCATGCAAAGTCAGCCTTaGCCTACTTCCTGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSMQSQP*PTSWVS
Trigger: AGACACCCAGGAAGTAGGCAAAGGCTGACTTTGCAT...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp TTGGTAGCAGTCACAGGACAGGATAAGGTGGACCAGAGGCCAGAAGAGAAACAGGCCTTGTCTGAGGTATaGAGGTATTCCTCGAGGGTT +
Preference number: 3 (lower is better)
Translates to: LVAVTGQDKVDQRPEEKQALSEV*RYSSRV
Trigger: AACCCTCGAGGAATACCTCAATACCTCAGACAAGGC...CTGTTTCTCTTCTGGCCTCTGGTCCACCTTATCCTGTCCTGTGACTGCTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CAA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGCAGTCATTTCGCCTCTaGAGGAGCTGCCAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMQSFRL*RSCQPP
Trigger: GGGAGGCTGGCAGCTCCTCAAGAGGCGAAATGACTG...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGGACACATGCCAGGGCTaGAATTCACCTGATGCTGGT +
Preference number: 3 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTDTCQG*NSPDAG
Trigger: ACCAGCATCAGGTGAATTCAAGCCCTGGCATGTGTC...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATTTGAGTACTGGGTCTTaGCAGCTCAGAGCATTCCTC +
Preference number: 3 (lower is better)
Translates to: LAENPHPEQELGQVREWNLSTGS*QLRAFL
Trigger: GAGGAATGCTCTGAGCTGCAAAGACCCAGTACTCAA...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp CTACTGCTGGTTGGTTCTTGCAGAGAACCCTCACCCTaGACAGGAGCTGGGTCAAGTCAGAGAATGGAATCA +
Preference number: 3 (lower is better)
Translates to: LLLVGSCREPSP*TGAGSSQRMES
Trigger: TGATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAGAACCAACCAGCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp GGCTGCTTCTGGAGTCTTCTGACCCTAGTGTTGCACTaGTCTCTGAACACAAAGGCAGTTCGTTCAGGCCAT +
Preference number: 3 (lower is better)
Translates to: GCFWSLLTLVLH*SLNTKAVRSGH
Trigger: ATGGCCTGAACGAACTGCCTTTGTGTTCAGAGATCAGTGCAACACTAGGGTCAGAAGACTCCAGAAGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp GCCCACAGGACAGCTAGTGCATTTCTCAGTTCTGCGTaGGAGTCTACTAAGTGGCTGCTTCTGGAGTCTTCT +
Preference number: 3 (lower is better)
Translates to: AHRTASAFLSSA*ESTKWLLLESS
Trigger: AGAAGACTCCAGAAGCAGCCACTTAGTAGACTCTCACGCAGAACTGAGAAATGCACTAGCTGTCCTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp AAACAATGTACTCATACCCTGCCTGGCCATGCTCCCTaGATGAATGGCCCCCAAGGTACCCACAGAACATTA +
Preference number: 3 (lower is better)
Translates to: KQCTHTLPGHAP*MNGPQGTHRTL
Trigger: TAATGTTCTGTGGGTACCTTGGGGGCCATTCATGCAGGGAGCATGGCCAGGCAGGGTATGAGTACATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp CAGAAACCATTTGGAAATCCAAGCAGTCTATTCCCCTaGTGCACATACCACCTTGTCCACGCTCCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: QKPFGNPSSLFP*CTYHLVHAPLE
Trigger: CTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATGGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp TACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTaGGTTACTCCTCAATTTGGTGGGAAAGAGACCAAG +
Preference number: 3 (lower is better)
Translates to: YNEMVANGSCSL*VTPQFGGKETK
Trigger: CTTGGTCTCTTTCCCACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp AACACTAGGACAGAGCTACAACGAGATGGTTGCCAATaGCAGCTGCTCCCTCTGGGTTACTCCTCAATTTGG +
Preference number: 3 (lower is better)
Translates to: NTRTELQRDGCQ*QLLPLGYSSIW
Trigger: CCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCTAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CTGCAGGCTCAAATGGGATTAACTGAACTCTATACCTaGGATGGGCCATGGACTGAGCTGTCCATGCAGAAG +
Preference number: 3 (lower is better)
Translates to: LQAQMGLTELYT*DGPWTELSMQK
Trigger: CTTCTGCATGGACAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGGCCTTGTCTGAGGTATaGAGGTATTCCTCGAGGGTT +
Preference number: 3 (lower is better)
Translates to: AQMGLTELYTWDGPWTELALSEV*RYSSRV
Trigger: AACCCTCGAGGAATACCTCAATACCTCAGACAAGGC...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCACAGACAGAAGCAGCTTaGTTCAATGTAAACATTGAT +
Preference number: 3 (lower is better)
Translates to: KRTVRPALCGRLSTQSTAQTEAA*FNVNID
Trigger: ATCAATGTTTACATTGAACAAAGCTGCTTCTGTCTG...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGAGTGTATTGCTAGTATaGTCTGAGAACAAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWSVLLV*SENKRE
Trigger: TTCTCTCTTGTTCTCAGACAATACTAGCAATACACT...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp GTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATaGGCTATGTATTTGCCATCTTGGGCTAGACACTGC +
Preference number: 3 (lower is better)
Translates to: VCIGQGGGSSGT*AMYLPSWARHC
Trigger: GCAGTGTCTAGCCCAAGATGGCAAATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp GCACAAGATGGGGGCTCCTATAATTTGAGCCAAACTTaGTCAGTAAGAGACAAGGCAGGGCTTGGCAGATAC +
Preference number: 3 (lower is better)
Translates to: AQDGGSYNLSQT*SVRDKAGLGRY
Trigger: GTATCTGCCAAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCCATCTTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CGAATGATCAGGTCTGTGCTGTGGGAAGTCCCTTTTTaGTCCATCTTCCTAAGCCCTGCCTTCCCCAAATAT +
Preference number: 3 (lower is better)
Translates to: RMIRSVLWEVPF*SIFLSPAFPKY
Trigger: ATATTTGGGGAAGGCAGGGCTTAGGAAGATGGACCAAAAAGGGACTTCCCACAGCACAGACCTGATCATTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CCACCCAGCAAAGGTTTACTTAACAAGGTCAGCAGCTaGGCTGCCAGTATTGCAGTTACAGTAAACCCTTCC +
Preference number: 3 (lower is better)
Translates to: PPSKGLLNKVSS*AASIAVTVNPS
Trigger: GGAAGGGTTTACTGTAACTGCAATACTGGCAGCCCAGCTGCTGACCTTGTTAAGTAAACCTTTGCTGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CCAGAAGAGAAACAGGATGGTAGTCTTCAGGCAAAGTaGCTGCAAAGTTATACCAAGCAGCACACTGGGGTG +
Preference number: 3 (lower is better)
Translates to: PEEKQDGSLQAK*LQSYTKQHTGV
Trigger: CACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTGAAGACTACCATCCTGTTTCTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATCATATTGGAAGGGCCTaGTCTGAGGTATTGAGGTAT +
Preference number: 3 (lower is better)
Translates to: LAENPHPEQELGQVREWNHIGRA*SEVLRY
Trigger: ATACCTCAATACCTCAGACAAGGCCCTTCCAATATG...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATTTGGATCAGACATTTTaGGAAAACACCAGCACGGCA +
Preference number: 3 (lower is better)
Translates to: LAENPHPEQELGQVREWNLDQTF*ENTSTA
Trigger: TGCCGTGCTGGTGTTTTCCAAAAATGTCTGATCCAA...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCGATCAATGCCTCCTGTaGCCCCATATGTTTTACAAT +
Preference number: 3 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSDQCLL*PHMFYN
Trigger: ATTGTAAAACATATGGGGCAACAGGAGGCATTGATC...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp CCGGATGTGCAAAGCATACTGATGAAACAGAGTATCTaGAAAGCTGTCCCCAGGAATCACGAAGGCTCAGTC +
Preference number: 3 (lower is better)
Translates to: PDVQSILMKQSI*KAVPRNHEGSV
Trigger: GACTGAGCCTTCGTGATTCCTGGGGACAGCTTTTCAGATACTCTGTTTCATCAGTATGCTTTGCACATCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp ATGCTGGAAAGGACCATAGGGACCACCTTGCCCAGTTaGTTAAGGCTGGCTACAGACACCTTCTTTAGAAAC +
Preference number: 3 (lower is better)
Translates to: MLERTIGTTLPS*LRLATDTFFRN
Trigger: GTTTCTAAAGAAGGTGTCTGTAGCCAGCCTTAATCAACTGGGCAAGGTGGTCCCTATGGTCCTTTCCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp AAACCATTTGGAAATCCAAGCAGTCTATTCCCCTGCTaGACATACCACCTTGTCCACGCTCCCCTTGAGATT +
Preference number: 3 (lower is better)
Translates to: KPFGNPSSLFPC*TYHLVHAPLEI
Trigger: AATCTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp GCTAAAGAGGAAATCCGAATGATCAGGTCTGTGCTGTaGGAAGTCCCTTTTTGGTCCATCTTCCTAAGCCCT +
Preference number: 3 (lower is better)
Translates to: AKEEIRMIRSVL*EVPFWSIFLSP
Trigger: AGGGCTTAGGAAGATGGACCAAAAAGGGACTTCCCACAGCACAGACCTGATCATTCGGATTTCCTCTTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp GCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATaGCGATCACATGTAAACATCATCAAGAGCAAACAC +
Preference number: 3 (lower is better)
Translates to: AGGYRHSLQQAL*RSHVNIIKSKH
Trigger: GTGTTTGCTCTTGATGATGTTTACATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGGAAAACGTAAACATATaGGAAGGGCCTTGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTENVNI*EGPCLR
Trigger: CCTCAGACAAGGCCCTTCCAATATGTTTACGTTTTC...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp AAAGCTGATGGTGCATCCAAGACACATGCCAGGGCTTaGATTCACCTGATGCTGGTGAATCAACACCTAATG +
Preference number: 3 (lower is better)
Translates to: KADGASKTHARA*IHLMLVNQHLM
Trigger: CATTAGGTGTTGATTCACCAGCATCAGGTGAATTCAAGCCCTGGCATGTGTCTTGGATGCACCATCAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp CCACAAAATCCTTACACCCAACTTCTTATCTTGCCTTaGGGGCAGAATTCGGACCACCCAGCAAAGGTTTAC +
Preference number: 3 (lower is better)
Translates to: PQNPYTQLLILP*GQNSDHPAKVY
Trigger: GTAAACCTTTGCTGGGTGGTCCGAATTCTGCCCTCAAGGCAAGATAAGAAGTTGGGTGTAAGGATTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp CACACTACAGACAAGAAATGTTATGGTGAACACAGCTaGAAGTCTACGAGAGGAAGTCAGTCGGGAAGGAAG +
Preference number: 3 (lower is better)
Translates to: HTTDKKCYGEHS*KSTRGSQSGRK
Trigger: CTTCCTTCCCGACTGACTTCCTCTCGTAGACTTGCAGCTGTGTTCACCATAACATTTCTTGTCTGTAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp AGCCCTGCCTCTCTCCTGAGTACATATGACACTCCATaGTGCAAGATTTCAAGGCAGATGCAGGTATCTTAT +
Preference number: 3 (lower is better)
Translates to: SPASLLSTYDTP*CKISRQMQVSY
Trigger: ATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTCATATGTACTCAGGAGAGAGGCAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CCTTCCTTACAAGGTACTCAAGAGTCTGAGTACAAATaGATAGACACACACTTGGAGCATGAGCTGGGCACA +
Preference number: 3 (lower is better)
Translates to: PSLQGTQESEYK*IDTHLEHELGT
Trigger: TGTGCCCAGCTCATGCTCCAAGTGTGTGTCTATCCATTTGTACTCAGACTCTTGAGTACCTTGTAAGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp CTTGGTAGAATCTGGACTCCCCCAACTCTCCAGACTTaGAATCTAGTGTTCTTTCCTATCTCAGTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: LGRIWTPPTLQT*NLVFFPISVLS
Trigger: GGAGAGAACTGAGATAGGAAAGAACACTAGATTCCAAGTCTGGAGAGTTGGGGGAGTCCAGATTCTACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp TGGACTTCTGGATGGTCATCTTCCCCAGAAACCATTTaGAAATCCAAGCAGTCTATTCCCCTGCTGCACATA +
Preference number: 3 (lower is better)
Translates to: WTSGWSSSPETI*KSKQSIPLLHI
Trigger: TATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp ATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGATaGTCATCTTCCCCAGAAACCATTTGGAAATCCAAG +
Preference number: 3 (lower is better)
Translates to: IPEQTALSWTSG*SSSPETIWKSK
Trigger: CTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp GTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTaGATGGTCATCTTCCCCAGAAACCATTTGGAAATC +
Preference number: 3 (lower is better)
Translates to: VNSRADCTKLDF*MVIFPRNHLEI
Trigger: GATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCAGCCAGCATATGGTTTaGTGTGATTGTTGGAAACCT +
Preference number: 3 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPSQHMV*CDCWKP
Trigger: AGGTTTCCAACAATCACACAAAACCATATGCTGGCT...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGGGCGTCAAAATAGTATaGGGAGTGTTACGCCATGGA +
Preference number: 3 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMGVKIV*GVLRHG
Trigger: TCCATGGCGTAACACTCCCAATACTATTTTGACGCC...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp AACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTaGGATTTGACATCGTTACCTAGCCAAGTTGGGGGT +
Preference number: 3 (lower is better)
Translates to: NSYPVGTKTRLM*DLTSLPSQVGG
Trigger: ACCCCCAACTTGGCTAGGTAACGATGTCAAATCTCACATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp GGTTCTAGTTATATAAACCCCTCTTTGAGGAGTTGTTaGACAGCCCAGGGACCGACCACCTATAAAACCTAT +
Preference number: 3 (lower is better)
Translates to: GSSYINPSLRSC*TAQGPTTYKTY
Trigger: ATAGGTTTTATAGGTGGTCGGTCCCTGGGCTGTGCAACAACTCCTCAAAGAGGGGTTTATATAACTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CCA 72 bp TCTTTCTGTAAAGGTAGGTACCAAGATCTAAACCCATaGCTCCCTGTTTCAAGGGCTTCCAACAAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: SFCKGRYQDLNP*LPVSRASNKRP
Trigger: TGGCCTTTTGTTGGAAGCCCTTGAAACAGGGAGCCATGGGTTTAGATCTTGGTACCTACCTTTACAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp GACATCAGTGAGTCAGATCAATACATCCTCTGGGGCTaGTTTTGCTTCACAGTTAGGATGAGCCATCTCTTA +
Preference number: 3 (lower is better)
Translates to: DISESDQYILWG*FCFTVRMSHLL
Trigger: TAAGAGATGGCTCATCCTAACTGTGAAGCAAAATCAGCCCCAGAGGATGTATTGATCTGACTCACTGATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR GCA 72 bp TGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTaGTTTTTGACTCAAAGCAGCTTTTTGGTTGAGGGG +
Preference number: 3 (lower is better)
Translates to: CKISRQMQVSYG*FLTQSSFLVEG
Trigger: CCCCTCAACCAAAAAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR-3UTR CAA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGGTACATTGTACTTCTTaGTCCTTCTTCATCATCTTG +
Preference number: 3 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGVHCTS*SFFIIL
Trigger: CAAGATGATGAAGAAGGACAAAGAAGTACAATGTAC...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR TCA 72 bp GCTGTTGTACATCCAATTTCTTTCCTTAATCATATCTaGTGCTGGGATGTGGGTAACCCCAAACTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: AVVHPISFLNHI*CWDVGNPKLKA
Trigger: TGCCTTCAGTTTGGGGTTACCCACATCCCAGCATCAGATATGATTAAGGAAAGAAATTGGATGTACAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp AACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTaGGGTATTCCTCGAGGGTTAAGGCTGTTATCAATG +
Preference number: 3 (lower is better)
Translates to: NVNILEGPCLRY*GIPRGLRLLSM
Trigger: CATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
3UTR CCA 72 bp CTTACCAAAGTTACAAAGGAAATTCTTGGTAGAATCTaGACTCCCCCAACTCTCCAGACTTGGAATCTAGTG +
Preference number: 3 (lower is better)
Translates to: LTKVTKEILGRI*TPPTLQTWNLV
Trigger: CACTAGATTCCAAGTCTGGAGAGTTGGGGGAGTCCAGATTCTACCAAGAATTTCCTTTGTAACTTTGGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR TCA 72 bp TTTGGTGGGAAAGAGACCAAGGTTCACTCGTTTTTCTaGATAGACCTTGGAGTTGCCCTAAATAATACACAG +
Preference number: 3 (lower is better)
Translates to: FGGKETKVHSFF*IDLGVALNNTQ
Trigger: CTGTGTATTATTTAGGGCAACTCCAAGGTCTATTCAGAAAAACGAGTGAACCTTGGTCTCTTTCCCACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCCACCGGGGTCTGCCCTaGCCAGAGCTAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SPRPWGAGMSAGLWALPAHRGLP*PELGSP
Trigger: GGGACTCCCTAGCTCTGGGCAGGGCAGACCCCGGTG...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGGAGGCTGGAGCTGGCTaGGGGCTCGGGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKEAGAG*GLGQSS
Trigger: TGAGGACTGCCCGAGCCCCCAGCCAGCTCCAGCCTC...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCGCCTGCATGTCTTCCTaGGAAACCGGGGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: SPRPWGAGMSAGLWALPAACMSS*ETGAPG
Trigger: CCCCGGTGCCCCGGTTTCCCAGGAAGACATGCAGGC...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCAGGCGCAGGCTTGGTCTaGGCCCGGTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPGAGLV*ARCSWV
Trigger: CACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCC...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCAGCCAGCCTGGGAGGCTaGCTGGGCTGTGGCATGTCG +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPASLGG*LGCGMS
Trigger: CGACATGCCACAGCCCAGCCAGCCTCCCAGGCTGGC...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCGGCCAGTCCTCAAGGTaGACCCCAGACGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRPWGAGMSAGLWALPAIGQSSR*TPDGSQ
Trigger: CTGGGAGCCGTCTGGGGTTCACCTTGAGGACTGGCC...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCACGCCGCTTCCTGGCGTaGCGGATGCTTGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPRRFLA*RMLGVL
Trigger: CAGAACGCCAAGCATCCGGCACGCCAGGAAGCGGCG...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCATGGCAGGCCTCGGCCTaGCCTTTTCCTGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPWQASA*PFPAPL
Trigger: GAGTGGGGCAGGAAAAGGCCAGGCCGAGGCCTGCCA...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCGACCAGCGGCTCATCTaGAAATGTCAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SPRPWGAGMSAGLWALPADQRLI*KCQPGA
Trigger: GGCCCCTGGCTGACATTTGCAGATGAGCCGCTGGTC...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCGGTCCCCGTAGGAGCTaGTGGTCTTGGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PRPWGAGMSAGLWALPAIGPRRS*WSWPLS
Trigger: GGACAGTGGCCAAGACCAGCAGCTCCTACGGGGACC...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGGCCTCCCCCATCCCATaGTGGTTCTGGGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKASPIP*WFWAKD
Trigger: GTCCTTGGCCCAGAACCACCATGGGATGGGGGAGGC...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGGAGCTTCTGCAGCAGTaGGAGCTCGTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKELLQQ*ELVHLR
Trigger: CCTGAGGTGGACGAGCTCTCACTGCTGCAGAAGCTC...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCGCCTTGACCGAGGTGTaGGGGAGGCATAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: PRPWGAGMSAGLWALPAIALTEV*GRHKQA
Trigger: CGCCTGTTTATGCCTCCCTCACACCTCGGTCAAGGC...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCACCCGGTGCTCTTGGGTaGAGCTGCGATCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPPGALG*SCDPYL
Trigger: GAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGG...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTCCCGGCACTTCGAGGTaGACCCGGGACAACCCGTTG +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTPGTSR*TRDNPL
Trigger: CAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGG...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCACTGTGGGCACTGCCTaGCATCCTGCTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: SPRPWGAGMSAGLWALPATVGTA*HPAGTS
Trigger: AGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGT...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCACTCTGGAGGCATGGTaGCTGCAGACCCCGATCCTG +
Preference number: 4 (lower is better)
Translates to: PRPWGAGMSAGLWALPAITLEAW*LQTPIL
Trigger: CAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGT...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTGGTCCCCGTAGGAGCTaGTGGTCTTGGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTGPRRS*WSWPLS
Trigger: GGACAGTGGCCAAGACCAGCAGCTCCTACGGGGACC...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCCATACTCAGGGCTCTTaGAGGAGGCCAGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPRPWGAGMSAGLWALPAHTQGS*RRPGLP
Trigger: AGGAAGACCTGGCCTCCTGCAAGAGCCCTGAGTATG...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CAGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGGCCGCGGCTGCAGCGTaGGGCGGAGTCAACGCCGAG +
Preference number: 4 (lower is better)
Translates to: QAKWLQSYTKQHTGVWGWAAAAA*GGVNAE
Trigger: CTCGGCGTTGACTCCGCCGCACGCTGCAGCCGCGGC...CCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCCAGTGGGCGCAGGCTTaGTCTGGGCCCGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: AGLWALPAILLGHLGHGIQWAQA*SGPGAL
Trigger: AAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTG...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCCGCGGCCTTCCCCAATaGCCTTTTCCCGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: AGLWALPAILLGHLGHGIRGLPQ*PFPAAS
Trigger: GGAAGCGGCGGGAAAAGGCCATTGGGGAAGGCCGCG...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCATGTCCACGCTCCCCTTaGGATTTCCCACCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPCPRSP*DFPPVS
Trigger: GGAAACAGGTGGGAAATCTCAAGGGGAGCGTGGACA...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTGACCAGCGGCTCATCTaGAAATGTCAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTDQRLI*KCQPGA
Trigger: GGCCCCTGGCTGACATTTGCAGATGAGCCGCTGGTC...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGAGGCATAAACAGGCGTaGCCAGACGGTAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKRHKQA*PDGRVC
Trigger: GCAAACCCTACCGTCTGGCCACGCCTGTTTATGCCT...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCACAGTGGGCGCAGGCTTaGTCTGGGCCCGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KRTVRPALCGRLSTQSTAQWAQA*SGPGAL
Trigger: AAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTG...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACCCTGCTGCTGCAGTCTaGCAGGCCGGCGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYPAAAV*QAGGPP
Trigger: GGGAGGTCCGCCGGCCTGCCAGACTGCAGCAGCAGG...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCGAGCTCACTTCGCTCTaGGTGCTTCTTTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SPRPWGAGMSAGLWALPAELTSL*VLLWQL
Trigger: AAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCTC...GGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCACTGGGGTGTGGGGATaGAAGCTATGTCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: PRPWGAGMSAGLWALPAITGVWG*KLCPQG
Trigger: GCCTTGTGGACATAGCTTCCATCCCCACACCCCAGT...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCAGCTGGGATGAGCGCTaGACTGTGGGCACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AGLWALPAILLGHLGHGISWDER*TVGTAC
Trigger: GCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCT...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CAA 72 bp GGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTaGGAAGCGAGGACACTAATGTGGCAGTGGAACGTC +
Preference number: 4 (lower is better)
Translates to: GPGTSRCTRDNP*EARTLMWQWNV
Trigger: GACGTTCCACTGCCACATTAGTGTCCTCGCTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTCAGAGCAAGTGGGGCTaGCCCCTGAGTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTQSKWG*PLSPLL
Trigger: AAGAAGAGGACTCAGGGGTCAGCCCCACTTGCTCTG...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGACCTCTACCAGTCCCTaGAACGGTGTCTTTACCCCA +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKTSTSP*NGVFTP
Trigger: TGGGGTAAAGACACCGTTTCAGGGACTGGTAGAGGT...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGGCCATGCTCCCTGCATaGATGGCCCCCAAGGTACCC +
Preference number: 4 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWAMLPA*MAPKVP
Trigger: GGGTACCTTGGGGGCCATTCATGCAGGGAGCATGGC...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTTCCTCCTCCTGCTGCTaGAGTCTGGCAGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSSSSCC*SLAGRR
Trigger: CCGCCGGCCTGCCAGACTGCAGCAGCAGGAGGAGGA...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACACCTGCCAGGGGCCTGTaGCTCAGCCCAAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTPARGL*LSPRGT
Trigger: GGTGCCCCTTGGGCTGAGGCACAGGCCCCTGGCAGG...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGCTACAACGAGATGGTTaGCAATGGCAGCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKLQRDG*QWQLLP
Trigger: AGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAG...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTGGACTGAGCTGTCCATaGAGAAGGACCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTGLSCP*RRTRLS
Trigger: GGACAGCCTGGTCCTTCTGCATGGACAGCTCAGTCC...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GCCTTGTCCATGGGCTGGGAGTATGCTCACCACTCAGTGGAAGATCATGGGCTCCGGGATCTGACCTGCTaGGAGGGGTTGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ALSMGWEYAHHSVEDHGLRDLTC*EGLLQA
Trigger: GGCCTGCAGCAACCCCTCCCAGCAGGTCAGATCCCG...GAGCCCATGATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCACACTGTCCTCGTCCGTaGGGCTGCCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPHCPRP*GCPAPA
Trigger: AGCGGGAGCTGGGCAGCCCCACGGACGAGGACAGTG...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGGGGTGAAGAGGCAGCAGCGTGCTGTCCTTaGGTGGGGCGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: DAGRASSELESGHGGEEAAACCP*VGRQHH
Trigger: GTGATGCTGGCGCCCCACCCAAGGACAGCACGCTGC...TGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTGTTGGGTTCAGTCTCTaGGTTCTCTGGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTVGFSL*VLWAPL
Trigger: CAGTGGTGCCCAGAGAACTCAGAGACTGAACCCAAC...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCAAAGAGGAAATCCGAATaGTCAGGTCTGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPKRKSE*SGLCCG
Trigger: CCCACAGCACAGACCTGATCATTCGGATTTCCTCTT...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTTCACCAGCCCAAGGCTaGCCCTTTGACCAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTSPAQG*PFDQEQ
Trigger: TTGCTCTTGGTCAAAGGGTCAGCCTTGGGCTGGTGA...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCATGGTCTCGATCTCTTaGCCTCATGATCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PRPWGAGMSAGLWALPAIMVSIS*PHDLPA
Trigger: GGCAGGAAGATCATGAGGTCAAGAGATCGAGACCAT...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCATTGGTCTGGGCCCGGTaGTCTTGGGTGAAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KRTVRPALCGRLSTQSTALVWAR*SWVKLR
Trigger: TCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAA...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATTCCTCCTCCTGCTGCTaGAGTCTGGCAGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADSSSCC*SLAGRR
Trigger: CCGCCGGCCTGCCAGACTGCAGCAGCAGGAGGAGGA...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCCCTGCCAGGGGCCTGTaGCTCAGCCCAAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSPARGL*LSPRGT
Trigger: GGTGCCCCTTGGGCTGAGGCACAGGCCCCTGGCAGG...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTGGTCTCTCAGCAGCGTaGTGTCCTTGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSGLSAA*CPWVGR
Trigger: GCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACC...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTGTTGCCAATGGCAGCTaGTCCCTCTGGGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTVANGS*SLWVTP
Trigger: AGGAGTAACCCAGAGGGAGCAGCTGCCATTGGCAAC...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTTCTTCCAGCCGCGGCTaGAGCGTGCGGCGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSSSSRG*SVRRSQ
Trigger: TTGACTCCGCCGCACGCTGCAGCCGCGGCTGGAAGA...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGTCCACCTCAGGGGCTaGGGCCGAGGGCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMVHLRG*GRGLLR
Trigger: CCGGAGAAGCCCTCGGCCCCAGCCCCTGAGGTGGAC...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGCTATGCAGGAGGCTTTGGAGTaGTGCCGGGACCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: VAAKLYQAAHWGVGMEAMQEALE*CRDQGR
Trigger: CCGGCCCTGGTCCCGGCACCACTCCAAAGCCTCCTG...CATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGCTATGCACCTCCAGCCGCAGTaGGCGCAGGCTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VAAKLYQAAHWGVGMEAMHLQPQ*AQAWSG
Trigger: CCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGTG...CATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CAGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGTCCAGGGCAGGGATCTaGGGTCCCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QAKWLQSYTKQHTGVWGWSRAGI*GPRRSC
Trigger: GCAGCTCCTACGGGGACCCCAGATCCCTGCCCTGGA...CCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCACTCTGGGTGCTTCTTTaGCAGCTTGTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KRTVRPALCGRLSTQSTALWVLL*QLVGSP
Trigger: GGGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAG...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACAGCCAGCCTGGGAGGCTaGCTGGGCTGTGGCATGTCG +
Preference number: 4 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTASLGG*LGCGMS
Trigger: CGACATGCCACAGCCCAGCCAGCCTCCCAGGCTGGC...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCCTGGCACGGATCTCATaGTCTCTCAGCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGLWALPAILLGHLGHGILARIS*SLSSVL
Trigger: CAGCACGCTGCTGAGAGACCATGAGATCCGTGCCAG...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATCGCGGCCTTCCCCAATaGCCTTTTCCCGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHRGLPQ*PFPAAS
Trigger: GGAAGCGGCGGGAAAAGGCCATTGGGGAAGGCCGCG...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGACTACTCGATGCCCTTaGCAGGCAGCGTCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWTTRCP*QAASPS
Trigger: GCTAGGGGACGCTGCCTGCCAAGGGCATCGAGTAGT...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACCCCTTCCCGGGCACCTaGACCTCTCCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYPFPGT*TSPGPL
Trigger: GAGTGGACCAGGAGAGGTCCAGGTGCCCGGGAAGGG...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp GACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTaGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: DCGHCLPSCWDI*AMVSVSQGLGC
Trigger: ACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp CAGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGCATCCAGGGTCTTGGTaGGCTCTGCCAGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QAKWLQSYTKQHTGVWGWHPGSW*ALPGGP
Trigger: AGGCCCTCCTGGCAGAGCTCACCAAGACCCTGGATG...CCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp CAGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGACCACGGAATGCCCCTaGAGGGGACAGGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QAKWLQSYTKQHTGVWGWTTECP*RGQGSS
Trigger: GCTGCTACCCTGTCCCCTTCAGGGGCATTCCGTGGT...CCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATTGCAGACCCCGATCCTaGAGGCAGCACTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHCRPRS*RQHCAE
Trigger: CTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGCA...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCGGCCGGGATCTGACCTaGTGGGAGGGGTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSGRDLT*WEGLLQ
Trigger: CTGCAGCAACCCCTCCCAGCAGGTCAGATCCCGGCC...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCCCTCGTCCGTGGGGCTaGCCAGCTCCCGCTCTACGT +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSPRPWG*PAPALR
Trigger: ACGTAGAGCGGGAGCTGGGCAGCCCCACGGACGAGG...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGTCCACTGTCAAGGTCTaGTCAAAGCTCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKSTVKV*SKLFLP
Trigger: TGGCAAGAAGAGCTTTGAGCAGACCTTGACAGTGGA...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTAATGTACTCATACCCTaGCTGGCCATGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTNVLIP*LAMLPA
Trigger: TGCAGGGAGCATGGCCAGGCAGGGTATGAGTACATT...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGCCAAGGACACATCCATaGATGTGGGTTTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKPRTHP*MWVSNS
Trigger: AGAGTTGGAAACCCACATGCATGGATGTGTCCTTGG...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCATGCAAAGTCAGCCTTTaGCTACTTCCTGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPCKVSL*LLPGCL
Trigger: AAGACACCCAGGAAGTAGGCAAAGGCTGACTTTGCA...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAGCACCGTGGAGTGGCTaGAGCCCAAGGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGAPWSG*SPRPWG
Trigger: TCCCCAAGGCCTTGGGCTGCAGCCACTCCACGGTGC...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGGTCCACCTCAGGGGCTaGGGCCGAGGGCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTVHLRG*GRGLLR
Trigger: CCGGAGAAGCCCTCGGCCCCAGCCCCTGAGGTGGAC...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTATGTTGGGTAGGATGTaGCCAGGAGGAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTMLGRM*PGGASA
Trigger: TGCAGAAGCTCCTCCTGGCCACATCCTACCCAACAT...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGCTATGCGGGATCTGACCTGCTaGGAGGGGTTGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VAAKLYQAAHWGVGMEAMRDLTC*EGLLQA
Trigger: GGCCTGCAGCAACCCCTCCCAGCAGGTCAGATCCCG...CATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCCCTGCTGCTGCAGTCTaGCAGGCCGGCGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIPAAAV*QAGGPP
Trigger: GGGAGGTCCGCCGGCCTGCCAGACTGCAGCAGCAGG...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGCCCCAGCTTCGTCCATaGCAGGCCTCGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMPQLRP*QASAWP
Trigger: AGGCCAGGCCGAGGCCTGCCATGGACGAAGCTGGGG...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGAGGGCAGAGCACCTTaGGGCTCCGAGGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCEGRAP*GSEGTS
Trigger: GCTGGTCCCCTCGGAGCCCCAAGGTGCTCTGCCCTC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCCACTGTCCTCGTCCGTaGGGCTGCCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSHCPRP*GCPAPA
Trigger: AGCGGGAGCTGGGCAGCCCCACGGACGAGGACAGTG...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAGCCTGGGAGGCTGGCTaGGCTGTGGCATGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVAWEAG*AVACRR
Trigger: CCTGCGACATGCCACAGCCCAGCCAGCCTCCCAGGC...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATGCAGCGTGCTGTCCTTaGGTGGGGCGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADAACCP*VGRQHH
Trigger: GTGATGCTGGCGCCCCACCCAAGGACAGCACGCTGC...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATTTTCCCGCCGCTTCCTaGCGTGCCGGATGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADFPAAS*RAGCLA
Trigger: CGCCAAGCATCCGGCACGCCAGGAAGCGGCGGGAAA...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCACAAGATCTAAACCCATaGCTCCCTGTTTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPQDLNP*LPVSRA
Trigger: AGCCCTTGAAACAGGGAGCCATGGGTTTAGATCTTG...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGCAGGGCCGCCTGGCCTaGCACCCAGCCGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGQGRLA*HPAGSL
Trigger: CAGTGACCCGGCTGGGTGCCAGGCCAGGCGGCCCTG...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp TATGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCATCCAGGGTCTTGGTaGGCTCTGCCAGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YGPTPFSTPGCQGVKGTYHPGSW*ALPGGP
Trigger: AGGCCCTCCTGGCAGAGCTCACCAAGACCCTGGATG...GTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGTTAACACAAGGCCGTTaGCTTTTAGATCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKLTQGR*LLDLRP
Trigger: AGGCCTCAGATCTAAAAGTCAACGGCCTTGTGTTAA...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGGCCAGTCCTCAAGGTaGACCCCAGACGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCGQSSR*TPDGSQ
Trigger: CTGGGAGCCGTCTGGGGTTCACCTTGAGGACTGGCC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCCTCTGCTCTCACATCTaGAGTTCCTTCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGLWALPAILLGHLGHGILCSHI*SSFEWL
Trigger: CAGCCACTCGAAGGAACTTCAGATGTGAGAGCAGAG...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATGCGAGGGGGTGGGTGTaGATTCCAGAGCAGACTGCA +
Preference number: 4 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHARGWV*IPEQTA
Trigger: TGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGC...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCAGCTGGCTGTGCACATaGCTGAATCTTCCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGLWALPAILLGHLGHGISWLCT*LNLPRG
Trigger: GCCTCTAGGAAGATTCAGTCATGTGCACAGCCAGCT...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCATGTGCCGAGGTGAGGTaGTTATGTAGTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPCAEVR*LCSSVQ
Trigger: TTGTACAGAACTACATAAGCACCTCACCTCGGCACA...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCTGTGCCGAGGTGAGGTaGTTATGTAGTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: PRPWGAGMSAGLWALPAICAEVR*LCSSVQ
Trigger: TTGTACAGAACTACATAAGCACCTCACCTCGGCACA...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATTGGAGGCATGGTGGCTaGAGACCCCGATCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADWRHGG*RPRSCR
Trigger: CCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCA...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAGGCCGGGATCTGACCTaGTGGGAGGGGTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVGRDLT*WEGLLQ
Trigger: CTGCAGCAACCCCTCCCAGCAGGTCAGATCCCGGCC...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACTCGTCTTCCTCCTCCTaGTGCTGCAGTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYSSSSS*CCSLAG
Trigger: GCCTGCCAGACTGCAGCAGCAGGAGGAGGAAGACGA...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCCCTCGTCCGTGGGGCTaGCCAGCTCCCGCTCTACGT +
Preference number: 4 (lower is better)
Translates to: KTKAALNICSAINASCCPPRPWG*PAPALR
Trigger: ACGTAGAGCGGGAGCTGGGCAGCCCCACGGACGAGG...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGGTCTCTCAGCAGCGTaGTGTCCTTGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCGLSAA*CPWVGR
Trigger: GCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGGGGTGAAGAGGCATCCTGGCGTGCCGGATaGTTGGCGTTCTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: DAGRASSELESGHGGEEASWRAG*LAFCLN
Trigger: GTTCAGACAGAACGCCAAGCATCCGGCACGCCAGGA...TGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp TTGGTAGCAGTCACAGGACAGGATAAGGTGGACCAGAGGCCAGAAGAGAAACAGGGAAGGAGGGCTCGTTaGGCTTCCTCAGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LVAVTGQDKVDQRPEEKQGRRAR*ASSGQR
Trigger: GCGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCC...CTGTTTCTCTTCTGGCCTCTGGTCCACCTTATCCTGTCCTGTGACTGCTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACCGCCTCTTGAGGAGCTaGCAGCCTCCCCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYRLLRS*QPPLEN
Trigger: GTTTTCCAGGGGAGGCTGGCAGCTCCTCAAGAGGCG...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTTTGTCCCCAGGTGGCTaGTGCCTTGTCTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSLSPGG*CLVWGH
Trigger: GTGACCCCAGACAAGGCAGCAGCCACCTGGGGACAA...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp GACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGGGGTGAAGAGGCATCCCATAAATGGACATaGAGCCAAGGGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: DAGRASSELESGHGGEEASHKWT*SQGQGR
Trigger: GCGGCCCTGCCCTTGGCTGCATGTCCATTTATGGGA...TGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCGCACCGTGGAGTGGCTaGAGCCCAAGGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSAPWSG*SPRPWG
Trigger: TCCCCAAGGCCTTGGGCTGCAGCCACTCCACGGTGC...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp TCTACTTCCCCCAACAGCTTCTCGTCCATTAGTAACCTGCTGCAGTGCCACATAGAGGCTGGAGCTGGCTaGGGGCTCGGGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: STSPNSFSSISNLLQCHIEAGAG*GLGQSS
Trigger: TGAGGACTGCCCGAGCCCCCAGCCAGCTCCAGCCTC...TATGTGGCACTGCAGCAGGTTACTAATGGACGAGAAGCTGTTGGGGGAAGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACACAGGAGGCTTTGGAGTaGTGCCGGGACCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTQEALE*CRDQGR
Trigger: CCGGCCCTGGTCCCGGCACCACTCCAAAGCCTCCTG...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCCTGCTGCTGCAGTCTaGCAGGCCGGCGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVPAAAV*QAGGPP
Trigger: GGGAGGTCCGCCGGCCTGCCAGACTGCAGCAGCAGG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCCTGCTGCTGCAGTCTaGCAGGCCGGCGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAPAAAV*QAGGPP
Trigger: GGGAGGTCCGCCGGCCTGCCAGACTGCAGCAGCAGG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCTGGCAGGCCTCGGCCTaGCCTTTTCCTGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLWQASA*PFPAPL
Trigger: GAGTGGGGCAGGAAAAGGCCAGGCCGAGGCCTGCCA...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCCCCAGCTTCGTCCATaGCAGGCCTCGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCPQLRP*QASAWP
Trigger: AGGCCAGGCCGAGGCCTGCCATGGACGAAGCTGGGG...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCACTACGTCGTAGGCCTTaGGAGCCAGGCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPLRRRP*EPGTVR
Trigger: CCTCACTGTGCCTGGCTCCCAAGGCCTACGACGTAG...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCTTCTTTGGCAGCTTGTaGGCAGCCCCTGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSFFGSL*AAPGVA
Trigger: GGCCACCCCAGGGGCTGCCCACAAGCTGCCAAAGAA...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCGCCTGGGAGGCTGGCTaGGCTGTGGCATGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIAWEAG*AVACRR
Trigger: CCTGCGACATGCCACAGCCCAGCCAGCCTCCCAGGC...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCGTGGGCACCGTGGAGTaGCTGCAGCCCAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSVGTVE*LQPKAL
Trigger: CAAGGCCTTGGGCTGCAGCCACTCCACGGTGCCCAC...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp GTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGCTATGCCCGGTGCTCTTGGGTaGAGCTGCGATCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: VAAKLYQAAHWGVGMEAMPGALG*SCDPYL
Trigger: GAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGG...CATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp GACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGGGGTGAAGAGGCAGCCCAAAGTGTTTGGTaGGGCTGGCACGGATCTCAT +
Preference number: 4 (lower is better)
Translates to: DAGRASSELESGHGGEEAAQSVW*GWHGSH
Trigger: ATGAGATCCGTGCCAGCCTCACCAAACACTTTGGGC...TGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp GCCTTGTCCATGGGCTGGGAGTATGCTCACCACTCAGTGGAAGATCATGGGCTCAGGGATAGGCCAGCATaGAACCCAGCCAGCATATGG +
Preference number: 4 (lower is better)
Translates to: ALSMGWEYAHHSVEDHGLRDRPA*NPASIW
Trigger: CCATATGCTGGCTGGGTTTCATGCTGGCCTATCCCT...GAGCCCATGATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGTCCCACGTCAGAACTTaGGTACTGGGTCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWSHVRT*VLGLCS
Trigger: GCTGCAAAGACCCAGTACTCAAGTTCTGACGTGGGA...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTGTCCCTCTGTGTAGGTaGAATTCTTGCACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTVPLCR*NSCTFL
Trigger: GAGAAAGGTGCAAGAATTTCACCTACACAGAGGGAC...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGCAGACCCCGATCCTaGAGGCAGCACTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSCRPRS*RQHCAE
Trigger: CTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGCA...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp TTGGTAGCAGTCACAGGACAGGATAAGGTGGACCAGAGGCCAGAAGAGAAACAGTGGAGGCATGGTGGCTaGAGACCCCGATCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVAVTGQDKVDQRPEEKQWRHGG*RPRSCR
Trigger: CCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCA...CTGTTTCTCTTCTGGCCTCTGGTCCACCTTATCCTGTCCTGTGACTGCTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCACCGGGGTCTGCCCTaGCCAGAGCTAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVHRGLP*PELGSP
Trigger: GGGACTCCCTAGCTCTGGGCAGGGCAGACCCCGGTG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACAGCTGGGAGGGGTTGCTaGAGGCCTTGGGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTAGRGC*RPWGVA
Trigger: AGCCACTCCCCAAGGCCTGCAGCAACCCCTCCCAGC...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTGGCCGGGATCTGACCTaGTGGGAGGGGTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCGRDLT*WEGLLQ
Trigger: CTGCAGCAACCCCTCCCAGCAGGTCAGATCCCGGCC...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCCTCGTCCGTGGGGCTaGCCAGCTCCCGCTCTACGT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVPRPWG*PAPALR
Trigger: ACGTAGAGCGGGAGCTGGGCAGCCCCACGGACGAGG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCGGTCCCCGTAGGAGCTaGTGGTCTTGGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSGPRRS*WSWPLS
Trigger: GGACAGTGGCCAAGACCAGCAGCTCCTACGGGGACC...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGGGTGGGGTGAGTCCTaGTGTGCCACAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCGWGES*CATELH
Trigger: GTGGAGCTCTGTGGCACAGCAGGACTCACCCCACCC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TTGGTAGCAGTCACAGGACAGGATAAGGTGGACCAGAGGCCAGAAGAGAAACAGGGGTGGGGTGAGTCCTaGTGTGCCACAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LVAVTGQDKVDQRPEEKQGWGES*CATELH
Trigger: GTGGAGCTCTGTGGCACAGCAGGACTCACCCCACCC...CTGTTTCTCTTCTGGCCTCTGGTCCACCTTATCCTGTCCTGTGACTGCTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCCTGCCAGGGGCCTGTaGCTCAGCCCAAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVPARGL*LSPRGT
Trigger: GGTGCCCCTTGGGCTGAGGCACAGGCCCCTGGCAGG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCCTGCGGGAACAGAGCTaGCGGTTGGCCTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSLREQS*RLALLG
Trigger: ACCAAGCAAGGCCAACCGGCAGCTCTGTTCCCGCAG...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCGCCGCTTCCTGGCGTaGCGGATGCTTGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCRRFLA*RMLGVL
Trigger: CAGAACGCCAAGCATCCGGCACGCCAGGAAGCGGCG...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGCCCCCTGCACCCTCTaGAAGGGGACGTGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVAPCTL*KGTWAS
Trigger: TGACGCCCACGTCCCCTTGCAGAGGGTGCAGGGGGC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACATCGTCTACCGCCCCCTaGACCCTCTGCAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTSSTAP*TLCKGT
Trigger: CGTCCCCTTGCAGAGGGTGCAGGGGGCGGTAGACGA...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATGTACGACCTGCCCTGTaGGGGCGGCTATCGACACAG +
Preference number: 4 (lower is better)
Translates to: LAENPHPEQELGQVREWNVRPAL*GRLSTQ
Trigger: CTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTAC...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTACGGACAGTACGACCTaGCCTGTGCGGGCGGCTATC +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPTDSTT*PVRAAI
Trigger: GATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGT...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCAAGATTTCAAGGCAGATaGAGGTATCTTATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: QGLADTARKRQAALSCRPRFQGR*RYLMGA
Trigger: AGCACCCATAAGATACCTGCATCTGCCTTGAAATCT...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGCGAAGGCTCAGTCACTaGTGCTATACCATTAAAGAA +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKRRLSH*CYTIKE
Trigger: TTCTTTAATGGTATAGCAGCAGTGACTGAGCCTTCG...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGGCCTGCATGTCTTCCTaGGAAACCGGGGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWACMSS*ETGAPG
Trigger: CCCCGGTGCCCCGGTTTCCCAGGAAGACATGCAGGC...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGGTTGCTGCAGGCCTTaGGGAGTGGCTCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCGCCRP*GVAQGS
Trigger: AGACCCCTGAGCCACTCCCCAAGGCCTGCAGCAACC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCAGGAGGCTTTGGAGTaGTGCCGGGACCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAQEALE*CRDQGR
Trigger: CCGGCCCTGGTCCCGGCACCACTCCAAAGCCTCCTG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAGCCCAGGAGGCTTTaGAGTGGTGCCGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCQPRRL*SGAGTR
Trigger: CCTGGTCCCGGCACCACTCCAAAGCCTCCTGGGCTG...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGCGCAGGCTTGGTCTaGGCCCGGTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVGAGLV*ARCSWV
Trigger: CACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCACCTCCAGCCGCAGTaGGCGCAGGCTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVHLQPQ*AQAWSG
Trigger: CCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGTG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCCCCAGCTTCGTCCATaGCAGGCCTCGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVPQLRP*QASAWP
Trigger: AGGCCAGGCCGAGGCCTGCCATGGACGAAGCTGGGG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGAGGGCAGAGCACCTTaGGGCTCCGAGGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVEGRAP*GSEGTS
Trigger: GCTGGTCCCCTCGGAGCCCCAAGGTGCTCTGCCCTC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTGAGAAGGGACGCTTCTaGCCAGCCTGGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCEKGRF*PAWEAG
Trigger: GCCAGCCTCCCAGGCTGGCCAGAAGCGTCCCTTCTC...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTTTGCAGGACGCCTTCTaGTCGGAGCACCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSLQDAF*SEHLAV
Trigger: TACTGCCAGGTGCTCCGACCAGAAGGCGTCCTGCAA...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCGCGGCCTTCCCCAATaGCCTTTTCCCGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCRGLPQ*PFPAAS
Trigger: GGAAGCGGCGGGAAAAGGCCATTGGGGAAGGCCGCG...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp GTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGCTATGATGAGCGCTGGACTGTaGGCACTGCCTGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: VAAKLYQAAHWGVGMEAMMSAGL*ALPAIL
Trigger: CAGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCAT...CATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCAGCTGGGATGAGCGCTaGACTGTGGGCACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSSWDER*TVGTAC
Trigger: GCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCT...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTGTTGGGTTCAGTCTCTaGGTTCTCTGGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSVGFSL*VLWAPL
Trigger: CAGTGGTGCCCAGAGAACTCAGAGACTGAACCCAAC...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp GACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGGGGTGAAGAGGCAAGCACTGTGCCGAGGTaGGGTGCTTATGTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: DAGRASSELESGHGGEEASTVPR*GAYVVL
Trigger: CAGAACTACATAAGCACCTCACCTCGGCACAGTGCT...TGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAGCCTTGACCGAGGTGTaGGGGAGGCATAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVALTEV*GRHKQA
Trigger: CGCCTGTTTATGCCTCCCTCACACCTCGGTCAAGGC...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGCCAGTCCTCAAGGTaGACCCCAGACGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVGQSSR*TPDGSQ
Trigger: CTGGGAGCCGTCTGGGGTTCACCTTGAGGACTGGCC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACAAGTGGGGCTGACCCCTaGGTCCTCTTCTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTSGADP*VLFFIV
Trigger: GACGATGAAGAAGAGGACTCAGGGGTCAGCCCCACT...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCACCAAGGCTGACCCTTTaGCCAAGAGCAATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KRTVRPALCGRLSTQSTAPRLTL*PRAIKE
Trigger: TTCCTTGATTGCTCTTGGTCAAAGGGTCAGCCTTGG...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATCTGCTCTCTCCTACCTaGCAGCAGCCCCATTCCCAA +
Preference number: 4 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADLLSPT*QQPHSQ
Trigger: TTGGGAATGGGGCTGCTGTCAGGTAGGAGAGAGCAG...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACTGGCTCTCCTGCTGCTaGCATCTCCAAAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYWLSCC*HLQRHL
Trigger: GAGATGCCTTTGGAGATGTCAGCAGCAGGAGAGCCA...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACAACCCAGCCGGGTCACTaGCACTCAGTCCTGTACCAT +
Preference number: 4 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTTQPGH*HSVLYH
Trigger: ATGGTACAGGACTGAGTGTCAGTGACCCGGCTGGGT...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACATTTAGATCTGAGGCCTaGCTGGCGCCAGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTFRSEA*LAPGGP
Trigger: GGGACCGCCTGGCGCCAGGCAGGCCTCAGATCTAAA...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGGCTGGGAGGGGTTGCTaGAGGCCTTGGGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGAGRGC*RPWGVA
Trigger: AGCCACTCCCCAAGGCCTGCAGCAACCCCTCCCAGC...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGGCCGGGATCTGACCTaGTGGGAGGGGTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAGRDLT*WEGLLQ
Trigger: CTGCAGCAACCCCTCCCAGCAGGTCAGATCCCGGCC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTCCTCCTCCTGCTGCTaGAGTCTGGCAGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVSSSCC*SLAGRR
Trigger: CCGCCGGCCTGCCAGACTGCAGCAGCAGGAGGAGGA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp TTGGTAGCAGTCACAGGACAGGATAAGGTGGACCAGAGGCCAGAAGAGAAACAGTCGTCTTCCTCCTCCTaGTGCTGCAGTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVAVTGQDKVDQRPEEKQSSSSS*CCSLAG
Trigger: GCCTGCCAGACTGCAGCAGCAGGAGGAGGAAGACGA...CTGTTTCTCTTCTGGCCTCTGGTCCACCTTATCCTGTCCTGTGACTGCTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAGACCAGCGGCTCATCTaGAAATGTCAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVDQRLI*KCQPGA
Trigger: GGCCCCTGGCTGACATTTGCAGATGAGCCGCTGGTC...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCCTGCCAGGGGCCTGTaGCTCAGCCCAAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKPARGL*LSPRGT
Trigger: GGTGCCCCTTGGGCTGAGGCACAGGCCCCTGGCAGG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTTTCTGTCTTCCTCCCTaGCAGGGGCCTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPFCLPP*QGPVPQ
Trigger: CTGAGGCACAGGCCCCTGGCAGGGAGGAAGACAGAA...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTTCTGTCTTCCTCCCTaGCAGGGGCCTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSFCLPP*QGPVPQ
Trigger: CTGAGGCACAGGCCCCTGGCAGGGAGGAAGACAGAA...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGGTCTCTCAGCAGCGTaGTGTCCTTGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAGLSAA*CPWVGR
Trigger: GCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATTGCTCTCGCCGCTGCTaGTGCTGCTGTCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHCSRRC*CCCLQR
Trigger: TCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCA...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCGCCGCTTCCTGGCGTaGCGGATGCTTGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKARRFLA*RMLGVL
Trigger: CAGAACGCCAAGCATCCGGCACGCCAGGAAGCGGCG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGAATTTGAGCCAAACTTaGTCAGTAAGAGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKNLSQT*SVRDKA
Trigger: TGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATT...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCGTAGAGACTACTCGATaGCCTTGGCAGGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSVETTR*PWQAAS
Trigger: GGACGCTGCCTGCCAAGGGCATCGAGTAGTCTCTAC...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGACCCTCCACCCATTaGTCTGGTGGCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVGPSTH*SGGGSS
Trigger: GGAGGAGCCGCCACCAGAGCAATGGGTGGAGGGTCC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403750.5
CDS-3UTR CCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTGCTCCCCAAAGCAGGTaGCCGAGTCAAAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPAPQSR*PSQSRW
Trigger: CCAGCGACTTTGACTCGGCCACCTGCTTTGGGGAGC...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGCTCCCCAAAGCAGGTaGCCGAGTCAAAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMAPQSR*PSQSRW
Trigger: CCAGCGACTTTGACTCGGCCACCTGCTTTGGGGAGC...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTCCACCTCAGGGGCTaGGGCCGAGGGCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRVHLRG*GRGLLR
Trigger: CCGGAGAAGCCCTCGGCCCCAGCCCCTGAGGTGGAC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp GACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGGGGTGAAGAGGCAGCGGTCCCTTCCTTCTaGGTGTCAGAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: DAGRASSELESGHGGEEAAVPSF*VSELDV
Trigger: AACATCAAGCTCTGACACCCAGAAGGAAGGGACCGC...TGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGTCTGAGACTGCATCATaGGAGCCTTCTTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWSETAS*EPSCLG
Trigger: CCCAAGACAAGAAGGCTCCCATGATGCAGTCTCAGA...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCAGCCCAGGAGGCTTTaGAGTGGTGCCGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAQPRRL*SGAGTR
Trigger: CCTGGTCCCGGCACCACTCCAAAGCCTCCTGGGCTG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCAGCCCAGGAGGCTTTaGAGTGGTGCCGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVQPRRL*SGAGTR
Trigger: CCTGGTCCCGGCACCACTCCAAAGCCTCCTGGGCTG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGCTATGTGGGCCCGGTGCTCTTaGGTGAAGCTGCGATCCTTA +
Preference number: 4 (lower is better)
Translates to: VAAKLYQAAHWGVGMEAMWARCS*VKLRSL
Trigger: TAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCA...CATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGGCGCAGGCTTGGTCTaGGCCCGGTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINGAGLV*ARCSWV
Trigger: CACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCAGTGGGCGCAGGCTTaGTCTGGGCCCGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVQWAQA*SGPGAL
Trigger: AAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGAGGGCAGAGCACCTTaGGGCTCCGAGGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINEGRAP*GSEGTS
Trigger: GCTGGTCCCCTCGGAGCCCCAAGGTGCTCTGCCCTC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATGAGGGCAGAGCACCTTaGGGCTCCGAGGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNEGRAP*GSEGTS
Trigger: GCTGGTCCCCTCGGAGCCCCAAGGTGCTCTGCCCTC...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCCTACGTCGTAGGCCTTaGGAGCCAGGCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLLRRRP*EPGTVR
Trigger: CCTCACTGTGCCTGGCTCCCAAGGCCTACGACGTAG...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCACTGTCCTCGTCCGTaGGGCTGCCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVHCPRP*GCPAPA
Trigger: AGCGGGAGCTGGGCAGCCCCACGGACGAGGACAGTG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACACCCCGTAGGAGCTGCTaGTCTTGGCCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTPRRSC*SWPLSS
Trigger: CGAGGACAGTGGCCAAGACCAGCAGCTCCTACGGGG...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGCAGCGTGCTGTCCTTaGGTGGGGCGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVAACCP*VGRQHH
Trigger: GTGATGCTGGCGCCCCACCCAAGGACAGCACGCTGC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTTTCCCGCCGCTTCCTaGCGTGCCGGATGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVFPAAS*RAGCLA
Trigger: CGCCAAGCATCCGGCACGCCAGGAAGCGGCGGGAAA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCAGACAAGGCAGGGCTTaGCAGATACGGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSRQGRA*QIRPGN
Trigger: GTTTCCGGGCCGTATCTGCCAAGCCCTGCCTTGTCT...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGAGGCCAGCAAAGGGTTaGCCCCAGCACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWRPAKG*PQHWLS
Trigger: GGAGAGCCAGTGCTGGGGCCAACCCTTTGCTGGCCT...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GCCTTGTCCATGGGCTGGGAGTATGCTCACCACTCAGTGGAAGATCATGGGCTCGGGAGCTGGTCTTCTTaGATAAGGCAACTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ALSMGWEYAHHSVEDHGLGSWSS*IRQLSQ
Trigger: CTGGCTGAGTTGCCTTATCCAAGAAGACCAGCTCCC...GAGCCCATGATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCATTAGAAACCTGGGGTTaGGGAGAGGGCTCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPLETWG*GEGSCW
Trigger: CCAACACGAGCCCTCTCCCCAACCCCAGGTTTCTAA...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCCATCTTGTCCCCAGGTaGCTGCTGCCTTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLHLVPR*LLPCLG
Trigger: CCCCAGACAAGGCAGCAGCCACCTGGGGACAAGATG...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGAAGGCCTTGGGGAGCTaGGATGAGCGCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMKALGS*DERWTV
Trigger: CACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTT...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAAGGCCTTGGGGAGCTaGGATGAGCGCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVKALGS*DERWTV
Trigger: CACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTT...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTGGGCACCGTGGAGTaGCTGCAGCCCAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAVGTVE*LQPKAL
Trigger: CAAGGCCTTGGGCTGCAGCCACTCCACGGTGCCCAC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTGGGCCTCTTCTGAATTaGAATCTGGGCATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSGPLLN*NLGMGV
Trigger: CACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCC...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAATGAGCGCTGGACTGTaGGCACTGCCTGCCATCCGT +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVMSAGL*ALPAIR
Trigger: ACGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCAT...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434684.1
3UTR CAA 72 bp GGACACAGTGGGATTGAACCTACTGCTGGTTGGTTCTaGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GHSGIEPTAGWF*QRTLTLNRSWV
Trigger: GACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAGAACCAACCAGCAGTAGGTTCAATCCCACTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp GGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTaGGCTGTCCTATCTAGAGACCTGGAGGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: GTSWPWYQCLRA*AVLSRDLEAQT
Trigger: AGTTTGGGCCTCCAGGTCTCTAGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAGTACAACTTCGGCTCTaGGACTGCATCATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGVQLRL*DCIMGA
Trigger: GGCTCCCATGATGCAGTCTCAGAGCCGAAGTTGTAC...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCGCCTTGACCGAGGTGTaGGGGAGGCATAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: KTKAALNICSAINASCCPALTEV*GRHKQA
Trigger: CGCCTGTTTATGCCTCCCTCACACCTCGGTCAAGGC...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTGTGACAAGGCCAGCATaGGGCACCTGGGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCVTRPA*GTWESL
Trigger: GAGACTCTCCCAGGTGCCTCATGCTGGCCTTGTCAC...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTGTGGTGGGTGGGGTaGGTCCTGCTGTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAVWWVG*VLLCHR
Trigger: TCTGTGGCACAGCAGGACTCACCCCACCCACCACAC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTAGTGGGGCTGACCCCTaGGTCCTCTTCTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPSGADP*VLFFIV
Trigger: GACGATGAAGAAGAGGACTCAGGGGTCAGCCCCACT...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTGGAAGGGGCGATGGGTaGCGGACCCGGCACTTCGAG +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIGRGDG*RTRHFE
Trigger: CTCGAAGTGCCGGGTCCGTCACCCATCGCCCCTTCC...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATCACACACTTGGAGCATaGGCTGGGCACAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: LAENPHPEQELGQVREWNHTLGA*AGHKMG
Trigger: CCCCATCTTGTGCCCAGCTCATGCTCCAAGTGTGTG...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCAGAGAACCCTCACCCTaGACAGGAGCTGGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSREPSP*TGAGSS
Trigger: ACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCT...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCTTGGGGAGCTGGGATaGGCGCTGGACTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVLGELG*ALDCGH
Trigger: GTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTATTCTCTGGGCACCACTaGAGCTCCCCAAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVFSGHH*SSPKQV
Trigger: CACCTGCTTTGGGGAGCTGCAGTGGTGCCCAGAGAA...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGCTGCAGGCAGCACTGTaGCGAGGTGAGGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMLQAAL*RGEVLM
Trigger: CATAAGCACCTCACCTCGGCACAGTGCTGCCTGCAG...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATCACCGGGGTCTGCCCTaGCCAGAGCTAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYHRGLP*PELGSP
Trigger: GGGACTCCCTAGCTCTGGGCAGGGCAGACCCCGGTG...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGCTGGGAGGGGTTGCTaGAGGCCTTGGGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVAGRGC*RPWGVA
Trigger: AGCCACTCCCCAAGGCCTGCAGCAACCCCTCCCAGC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCCTCGTCCGTGGGGCTaGCCAGCTCCCGCTCTACGT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRPRPWG*PAPALR
Trigger: ACGTAGAGCGGGAGCTGGGCAGCCCCACGGACGAGG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGGTCCCCGTAGGAGCTaGTGGTCTTGGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAGPRRS*WSWPLS
Trigger: GGACAGTGGCCAAGACCAGCAGCTCCTACGGGGACC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGGTGGGGTGAGTCCTaGTGTGCCACAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVGWGES*CATELH
Trigger: GTGGAGCTCTGTGGCACAGCAGGACTCACCCCACCC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCCTCAGCACCTTCCTTTaGAGGACGCCTTCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLLSTFL*RTPSGR
Trigger: CCGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAG...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCTTCTGTCTTCCTCCCTaGCAGGGGCCTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIFCLPP*QGPVPQ
Trigger: CTGAGGCACAGGCCCCTGGCAGGGAGGAAGACAGAA...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGGTCTCTCAGCAGCGTaGTGTCCTTGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINGLSAA*CPWVGR
Trigger: GCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATCATACTCAGGGCTCTTaGAGGAGGCCAGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADHTQGS*RRPGLP
Trigger: AGGAAGACCTGGCCTCCTGCAAGAGCCCTGAGTATG...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGGAAGGAGGGCTCGTTaGGCTTCCTCAGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVGRRAR*ASSGQR
Trigger: GCGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGCCTGGCCATGCTCCCTaGATGAATGGCCCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWPGHAP*MNGPQG
Trigger: ACCTTGGGGGCCATTCATGCAGGGAGCATGGCCAGG...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATGGTGGGGGCCTTAGCTaGACTCCATCCACTCATATT +
Preference number: 4 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHGGGLS*TPSTHI
Trigger: AATATGAGTGGATGGAGTGCAGCTAAGGCCCCCACC...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTTATGACACTCCATGCTaGAAGATTTCAAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTYDTPC*KISRQM
Trigger: CATCTGCCTTGAAATCTTGCAGCATGGAGTGTCATA...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAGCCATCATGGCTCACTaGAGCTCCAACCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGAIMAH*SSNLLG
Trigger: ACCCAAGAGGTTGGAGCTGCAGTGAGCCATGATGGC...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCCTCAGCCTCCCAAGTTaGTGGGACTACAGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLLSLPS*WDYRCA
Trigger: CGCACACCTGTAGTCCCAGCAACTTGGGAGGCTGAG...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACAGTGATCTCAGCTCACTaGAACCTCTGCCTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTVISAH*NLCLSG
Trigger: ACCCGAGAGGCAGAGGTTGCAGTGAGCTGAGATCAC...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGATCTGAGGCCTGCCTaGCGCCAGGCGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRDLRPA*RQAVPS
Trigger: GGAAGGGACCGCCTGGCGCCAGGCAGGCCTCAGATC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGAGGCTGGAGCTGGCTaGGGGCTCGGGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKEAGAG*GLGQSS
Trigger: TGAGGACTGCCCGAGCCCCCAGCCAGCTCCAGCCTC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGCCTGCATGTCTTCCTaGGAAACCGGGGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVACMSS*ETGAPG
Trigger: CCCCGGTGCCCCGGTTTCCCAGGAAGACATGCAGGC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGGGTTGCTGCAGGCCTTaGGGAGTGGCTCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGGCCRP*GVAQGS
Trigger: AGACCCCTGAGCCACTCCCCAAGGCCTGCAGCAACC...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCGGGATCTGACCTGCTaGGAGGGGTTGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVRDLTC*EGLLQA
Trigger: GGCCTGCAGCAACCCCTCCCAGCAGGTCAGATCCCG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCAGGAGGCTTTGGAGTaGTGCCGGGACCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRQEALE*CRDQGR
Trigger: CCGGCCCTGGTCCCGGCACCACTCCAAAGCCTCCTG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTCAGCCCAGGAGGCTTTaGAGTGGTGCCGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFQPRRL*SGAGTR
Trigger: CCTGGTCCCGGCACCACTCCAAAGCCTCCTGGGCTG...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGGCATAAACAGGCGTaGCCAGACGGTAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGRHKQA*PDGRVC
Trigger: GCAAACCCTACCGTCTGGCCACGCCTGTTTATGCCT...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGGCGCAGGCTTGGTCTaGGCCCGGTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKGAGLV*ARCSWV
Trigger: CACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCAGTGGGCGCAGGCTTaGTCTGGGCCCGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVQWAQA*SGPGAL
Trigger: AAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCACCTCCAGCCGCAGTaGGCGCAGGCTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRHLQPQ*AQAWSG
Trigger: CCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGTG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTGGCAGGCCTCGGCCTaGCCTTTTCCTGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVWQASA*PFPAPL
Trigger: GAGTGGGGCAGGAAAAGGCCAGGCCGAGGCCTGCCA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTCCCCAGCTTCGTCCATaGCAGGCCTCGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIPQLRP*QASAWP
Trigger: AGGCCAGGCCGAGGCCTGCCATGGACGAAGCTGGGG...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCACTGTCCTCGTCCGTaGGGCTGCCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKHCPRP*GCPAPA
Trigger: AGCGGGAGCTGGGCAGCCCCACGGACGAGGACAGTG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCCCCGTAGGAGCTGCTaGTCTTGGCCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVPRRSC*SWPLSS
Trigger: CGAGGACAGTGGCCAAGACCAGCAGCTCCTACGGGG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCCCCGTAGGAGCTGCTaGTCTTGGCCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAPRRSC*SWPLSS
Trigger: CGAGGACAGTGGCCAAGACCAGCAGCTCCTACGGGG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATTCCAGGGCAGGGATCTaGGGTCCCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINSRAGI*GPRRSC
Trigger: GCAGCTCCTACGGGGACCCCAGATCCCTGCCCTGGA...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCTGTGGGCTTGTACGGTaGTGTGGTGGGTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVICGLVR*CGGWGE
Trigger: CTCACCCCACCCACCACACCACCGTACAAGCCCACA...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTAGGGATCCTCCTCTGTaGGCTTGTACGGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPRDPPL*ACTVVW
Trigger: CCACACCACCGTACAAGCCCACAGAGGAGGATCCCT...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCAGGGATCCTCCTCTGTaGGCTTGTACGGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLRDPPL*ACTVVW
Trigger: CCACACCACCGTACAAGCCCACAGAGGAGGATCCCT...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGTTCTTTGGCAGCTTGTaGGCAGCCCCTGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGFFGSL*AAPGVA
Trigger: GGCCACCCCAGGGGCTGCCCACAAGCTGCCAAAGAA...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGGCCTGGGAGGCTGGCTaGGCTGTGGCATGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMAWEAG*AVACRR
Trigger: CCTGCGACATGCCACAGCCCAGCCAGCCTCCCAGGC...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGCCTGGGAGGCTGGCTaGGCTGTGGCATGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRAWEAG*AVACRR
Trigger: CCTGCGACATGCCACAGCCCAGCCAGCCTCCCAGGC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCCAGCCTGGGAGGCTaGCTGGGCTGTGGCATGTCG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKASLGG*LGCGMS
Trigger: CGACATGCCACAGCCCAGCCAGCCTCCCAGGCTGGC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCGTGCTGTCCTTGGGTaGGGCGCCAGCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKARAVLG*GASITA
Trigger: AGCTGTGATGCTGGCGCCCCACCCAAGGACAGCACG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCAACAGAGCTGCCGGTTaGCCTTGCTTGGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLNRAAG*PCLVGS
Trigger: AGAGCCCACCAAGCAAGGCCAACCGGCAGCTCTGTT...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATTTTCCCGCCGCTTCCTaGCGTGCCGGATGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINFPAAS*RAGCLA
Trigger: CGCCAAGCATCCGGCACGCCAGGAAGCGGCGGGAAA...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTACCTCCAGGGCAATCTaGCAAGGGGAGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKATSRAI*QGEQGS
Trigger: GCTGCCCTGCTCCCCTTGCCAGATTGCCCTGGAGGT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCCAGAAGGCCTGGTCTaGGTCACCGCTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAPEGLV*VTALPP
Trigger: AGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTTTCCGGCCTTGTCCATaGGCTGGGAGTATGCTCACC +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPFRPCP*AGSMLT
Trigger: GGTGAGCATACTCCCAGCCCATGGACAAGGCCGGAA...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATACCTGGGATGGGCCATaGACTGAGCTGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: LAENPHPEQELGQVREWNTWDGP*TELSMQ
Trigger: CTGCATGGACAGCTCAGTCCATGGCCCATCCCAGGT...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATCCCAATGCTCCTGGTTaGGGATCTGAGCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADPNAPG*GSEPLR
Trigger: TCTGAGAGGCTCAGATCCCCAACCAGGAGCATTGGG...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAACTAAGCTGGACTTCTaGATGGTCATCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KRTVRPALCGRLSTQSTATKLDF*MVIFPR
Trigger: TCTGGGGAAGATGACCATCCAGAAGTCCAGCTTAGT...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGCTATGCAGCACACTGGGGTGTaGGGATGGAAGCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: VAAKLYQAAHWGVGMEAMQHTGV*GWKLCP
Trigger: TGGACATAGCTTCCATCCCCACACCCCAGTGTGCTG...CATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGGGCTGCTGCCTTGTCTaGGGTCACCACGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGGCCLV*GHHGMP
Trigger: GGGCATTCCGTGGTGACCCCAGACAAGGCAGCAGCC...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CAA 72 bp CTGCAGCTCCCCTCCATTTACCCGGTACCTCCAAACTaGACGAGCAGACCTGGAGCCCATCTGTGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LQLPSIYPVPPN*TSRPGAHLCVK
Trigger: TTTTACACACAGATGGGCTCCAGGTCTGCTCGTCAAGTTTGGAGGTACCGGGTAAATGGAGGGGAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCAGCACTGTGCCGAGGTaGGGTGCTTATGTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSSTVPR*GAYVVL
Trigger: CAGAACTACATAAGCACCTCACCTCGGCACAGTGCT...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCCCGGTGCTCTTGGGTaGAGCTGCGATCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVPGALG*SCDPYL
Trigger: GAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCCCGGTGCTCTTGGGTaGAGCTGCGATCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAPGALG*SCDPYL
Trigger: GAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTGACAAGGCCAGCATaGGGCACCTGGGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAVTRPA*GTWESL
Trigger: GAGACTCTCCCAGGTGCCTCATGCTGGCCTTGTCAC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATAGTTGGGTCGCTTTGTaGCAAGGCCAGCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LAENPHPEQELGQVREWNSWVAL*QGQHEA
Trigger: TGCCTCATGCTGGCCTTGTCACAAAGCGACCCAACT...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGTGTGGTGGGTGGGGTaGGTCCTGCTGTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINVWWVG*VLLCHR
Trigger: TCTGTGGCACAGCAGGACTCACCCCACCCACCACAC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGGTGCTGTCCGCCAGTaGGAGCTCGTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRGAVRQ*ELVHLR
Trigger: CCTGAGGTGGACGAGCTCTCACTGGCGGACAGCACC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403750.5
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCTTGGGGAGCTGGGATaGGCGCTGGACTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRLGELG*ALDCGH
Trigger: GTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGGCCAGGAGGAGCTTCTaGAGCAGTGAGAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGARRSF*SSESSS
Trigger: GGACGAGCTCTCACTGCTGCAGAAGCTCCTCCTGGC...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATTTTAGATCTGAGGCCTaGCTGGCGCCAGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNFRSEA*LAPGGP
Trigger: GGGACCGCCTGGCGCCAGGCAGGCCTCAGATCTAAA...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACACTGCAGGCAGCACTGTaGCGAGGTGAGGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTLQAAL*RGEVLM
Trigger: CATAAGCACCTCACCTCGGCACAGTGCTGCCTGCAG...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTGCAGACCCCGATCCTaGAGGCAGCACTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVCRPRS*RQHCAE
Trigger: CTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGCA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTTGGTCTGGGCCCGGTaGTCTTGGGTGAAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKALVWAR*SWVKLR
Trigger: TCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTCGTCTTCCTCCTCCTaGTGCTGCAGTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVSSSSS*CCSLAG
Trigger: GCCTGCCAGACTGCAGCAGCAGGAGGAGGAAGACGA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGACCAGCGGCTCATCTaGAAATGTCAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVDQRLI*KCQPGA
Trigger: GGCCCCTGGCTGACATTTGCAGATGAGCCGCTGGTC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAGCTCAAAGCTCTTCTTaGCAAAAGTTGGGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: KRTVRPALCGRLSTQSTAAQSSS*QKLGRF
Trigger: AAAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGC...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGGGTGGGGTGAGTCCTaGTGTGCCACAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVGWGES*CATELH
Trigger: GTGGAGCTCTGTGGCACAGCAGGACTCACCCCACCC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCCTCAGCACCTTCCTTTaGAGGACGCCTTCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: KTKAALNICSAINASCCPLSTFL*RTPSGR
Trigger: CCGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAG...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGAGCTGCTCTCGCCGCTaGTGCTGCTGCTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AQMGLTELYTWDGPWTELSCSRR*CCCCLQ
Trigger: TTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCT...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCTGCGGGAACAGAGCTaGCGGTTGGCCTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKALREQS*RLALLG
Trigger: ACCAAGCAAGGCCAACCGGCAGCTCTGTTCCCGCAG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCGCCGCTTCCTGGCGTaGCGGATGCTTGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRRRFLA*RMLGVL
Trigger: CAGAACGCCAAGCATCCGGCACGCCAGGAAGCGGCG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGGAAGGAGGGCTCGTTaGGCTTCCTCAGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRGRRAR*ASSGQR
Trigger: GCGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp TATGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACGTGGGTTTCCAACTCTaGAGCTCCCCTCCATTTACC +
Preference number: 4 (lower is better)
Translates to: YGPTPFSTPGCQGVKGTYVGFQL*SSPPFT
Trigger: GGTAAATGGAGGGGAGCTGCAGAGTTGGAAACCCAC...GTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GCCTTGTCCATGGGCTGGGAGTATGCTCACCACTCAGTGGAAGATCATGGGCTCAATTCCAGAGCAGACTaGACTAAGCTGGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: ALSMGWEYAHHSVEDHGLNSRAD*TKLDFW
Trigger: CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATT...GAGCCCATGATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCCGAGTCAAAGTCGCTaGCATCCAGCTGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCPSQSR*HPAGRG
Trigger: ACCTCTCCCAGCTGGATGCCAGCGACTTTGACTCGG...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGCTCCCCAAAGCAGGTaGCCGAGTCAAAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAAPQSR*PSQSRW
Trigger: CCAGCGACTTTGACTCGGCCACCTGCTTTGGGGAGC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAGGAGCCTTCTTGTCTTaGGTGCTGTCCGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGGAFLS*VLSALT
Trigger: TGTTAAGGCGGACAGCACCCAAGACAAGAAGGCTCC...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCGGGATCTGACCTGCTaGGAGGGGTTGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRRDLTC*EGLLQA
Trigger: GGCCTGCAGCAACCCCTCCCAGCAGGTCAGATCCCG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCAGGCATAAACAGGCGTaGCCAGACGGTAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSRHKQA*PDGRVC
Trigger: GCAAACCCTACCGTCTGGCCACGCCTGTTTATGCCT...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTGGCAGGCCTCGGCCTaGCCTTTTCCTGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKWQASA*PFPAPL
Trigger: GAGTGGGGCAGGAAAAGGCCAGGCCGAGGCCTGCCA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTCCAGGGCAGGGATCTaGGGTCCCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMSRAGI*GPRRSC
Trigger: GCAGCTCCTACGGGGACCCCAGATCCCTGCCCTGGA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTCCAGGGCAGGGATCTaGGGTCCCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSRAGI*GPRRSC
Trigger: GCAGCTCCTACGGGGACCCCAGATCCCTGCCCTGGA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATGGAGCTGCGGGCAGCTaGGGTCCTCATCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYGAAGS*GPHPCP
Trigger: GGGACATGGATGAGGACCCCAGCTGCCCGCAGCTCC...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGGAGCTGCGGGCAGCTaGGGTCCTCATCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRGAAGS*GPHPCP
Trigger: GGGACATGGATGAGGACCCCAGCTGCCCGCAGCTCC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTGTGGGCTTGTACGGTaGTGTGGTGGGTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKACGLVR*CGGWGE
Trigger: CTCACCCCACCCACCACACCACCGTACAAGCCCACA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTTCTTTGGCAGCTTGTaGGCAGCCCCTGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVFFGSL*AAPGVA
Trigger: GGCCACCCCAGGGGCTGCCCACAAGCTGCCAAAGAA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCTCTGGGTGCTTCTTTaGCAGCTTGTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVLWVLL*QLVGSP
Trigger: GGGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGTGGCATGTCGCAGGTaGGACAGGAGCTCACTTCGC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVVACRR*DRSSLR
Trigger: GCGAAGTGAGCTCCTGTCCCACCTGCGACATGCCAC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTGGCATGTCGCAGGTaGGACAGGAGCTCACTTCGC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAVACRR*DRSSLR
Trigger: GCGAAGTGAGCTCCTGTCCCACCTGCGACATGCCAC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTGAGAAGGGACGCTTCTaGCCAGCCTGGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIEKGRF*PAWEAG
Trigger: GCCAGCCTCCCAGGCTGGCCAGAAGCGTCCCTTCTC...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGAGAAGGGACGCTTCTaGCCAGCCTGGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSREKGRF*PAWEAG
Trigger: GCCAGCCTCCCAGGCTGGCCAGAAGCGTCCCTTCTC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGAGAAGGGACGCTTCTaGCCAGCCTGGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKEKGRF*PAWEAG
Trigger: GCCAGCCTCCCAGGCTGGCCAGAAGCGTCCCTTCTC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCGTGCTGTCCTTGGGTaGGGCGCCAGCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVRAVLG*GASITA
Trigger: AGCTGTGATGCTGGCGCCCCACCCAAGGACAGCACG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGCAGCGTGCTGTCCTTaGGTGGGGCGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRAACCP*VGRQHH
Trigger: GTGATGCTGGCGCCCCACCCAAGGACAGCACGCTGC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTTTCCCGCCGCTTCCTaGCGTGCCGGATGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRFPAAS*RAGCLA
Trigger: CGCCAAGCATCCGGCACGCCAGGAAGCGGCGGGAAA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCGCGGCCTTCCCCAATaGCCTTTTCCCGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKRGLPQ*PFPAAS
Trigger: GGAAGCGGCGGGAAAAGGCCATTGGGGAAGGCCGCG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGGGGCCTCTTCTGAATTaGAATCGTAGTCAGTGTATC +
Preference number: 4 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWGPLLN*NRSQCI
Trigger: GATACACTGACTACGATTCCAATTCAGAAGAGGCCC...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACACAATGCAGGCTCTGCTaGGCCTCTTTCAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTQCRLC*ASFSKL
Trigger: CAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTG...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATGCGAGGACACTAATGTaGCAGTGGAACGTCAACACC +
Preference number: 4 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADARTLM*QWNVNT
Trigger: GGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGC...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGAAGAACCAGAAGGCCTaGTCTGGGTCACCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWKNQKA*SGSPLC
Trigger: GCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTT...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCCTGAGGGAGTAGGATaGGCTGGTGGCTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPPEGVG*AGGWPK
Trigger: TTTGGGCCAGCCACCAGCCCATCCTACTCCCTCAGG...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGTGCTCCCTGCATGAATaGCCCCCAAGGTACCCACAG +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWCSLHE*PPRYPQ
Trigger: CTGTGGGTACCTTGGGGGCCATTCATGCAGGGAGCA...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGTGGATCAGACATTTTTaGAAAACACCAGCACGGCAC +
Preference number: 4 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWWIRHF*KTPARH
Trigger: GTGCCGTGCTGGTGTTTTCCAAAAATGTCTGATCCA...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCACTAAGTGGCTGCTTCTaGAGTCTTCTGACCCTAGTG +
Preference number: 4 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPLSGCF*SLLTLV
Trigger: CACTAGGGTCAGAAGACTCCAGAAGCAGCCACTTAG...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCACCCATTGCTCTGGTaGCGGCTCCTCCAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVHPLLW*RLLQGS
Trigger: GGACCCTTGGAGGAGCCGCCACCAGAGCAATGGGTG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403750.5
CDS-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCGAGGCCGTGGGAGGCTaGATTCTCTTTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLEAVGG*ILFGSS
Trigger: ACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTC...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTATGAGTGGGCACCGTaGAGTGGCTGCAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAYEWAP*SGCSPR
Trigger: CCTTGGGCTGCAGCCACTCCACGGTGCCCACTCATA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
3UTR CAA 72 bp TTTGCCTTCCATCTGGGTAGCTGGTGGAGACAACCTTaGGCCACTAGATGGCGACCGCATGTTGATAAGGCA +
Preference number: 4 (lower is better)
Translates to: FAFHLGSWWRQP*ATRWRPHVDKA
Trigger: TGCCTTATCAACATGCGGTCGCCATCTAGTGGCCAAAGGTTGTCTCCACCAGCTACCCAGATGGAAGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp TCCCCTGCTGCACATACCACCTTGTCCACGCTCCCCTaGAGATTTCCCACCTGTTTCCATTGGAATCAGAAC +
Preference number: 4 (lower is better)
Translates to: SPAAHTTLSTLP*RFPTCFHWNQN
Trigger: GTTCTGATTCCAATGGAAACAGGTGGGAAATCTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp ATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTaGTCCACGCTCCCCTTGAGATTTCCCACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IQAVYSPAAHTT*STLPLRFPTCF
Trigger: GAAACAGGTGGGAAATCTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATGAGCTTCTGCAGCAGTaGGAGCTCGTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNELLQQ*ELVHLR
Trigger: CCTGAGGTGGACGAGCTCTCACTGCTGCAGAAGCTC...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCCTGGGTGTCAGAGCTTaGTGTTGGGTAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVILGVRA*CWVGCG
Trigger: GCCACATCCTACCCAACATCAAGCTCTGACACCCAG...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTGCATGTAGCGTATaGGTTGCACCATCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSCACSV*VAPSPA
Trigger: TGCAGGCGATGGTGCAACTCATACGCTACATGCACA...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTATCACAGAGCACGTCTTaGGCCAGAAGTTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVSQSTS*ARSSLR
Trigger: TCTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGA...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTCACAGAGCACGTCTTaGGCCAGAAGTTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSSQSTS*ARSSLR
Trigger: TCTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGA...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGCCTTGACCGAGGTGTaGGGGAGGCATAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVALTEV*GRHKQA
Trigger: CGCCTGTTTATGCCTCCCTCACACCTCGGTCAAGGC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATGTGACAAGGCCAGCATaGGGCACCTGGGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNVTRPA*GTWESL
Trigger: GAGACTCTCCCAGGTGCCTCATGCTGGCCTTGTCAC...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTGTGGTGGGTGGGGTaGGTCCTGCTGTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRVWWVG*VLLCHR
Trigger: TCTGTGGCACAGCAGGACTCACCCCACCCACCACAC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTGCCCAAAGTGTTTGGTaGGGCTGGCACGGATCTCAT +
Preference number: 4 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLAQSVW*GWHGSH
Trigger: ATGAGATCCGTGCCAGCCTCACCAAACACTTTGGGC...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCACAAGAAATGTTATGGTaGACACAGCTGCAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: KRTVRPALCGRLSTQSTAQEMLW*TQLQVY
Trigger: GTAGACTTGCAGCTGTGTTCACCATAACATTTCTTG...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGTGCCAGGGGTGTCACTaGAGTTCTGACAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWCQGCH*SSDSVS
Trigger: GGACACACTGTCAGAACTTCAGTGACACCCCTGGCA...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTAGACGAAGGACTACCTaGGGGAGTAGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKARRRTT*GSRMGW
Trigger: CCAGCCCATCCTACTCCCTCAGGTAGTCCTTCGTCT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GCCTTGTCCATGGGCTGGGAGTATGCTCACCACTCAGTGGAAGATCATGGGCTCTGTTGCACTGATCTCTaGACACAAAGGCAGTTCGTT +
Preference number: 4 (lower is better)
Translates to: ALSMGWEYAHHSVEDHGLCCTDL*TQRQFV
Trigger: AACGAACTGCCTTTGTGTTCAGAGATCAGTGCAACA...GAGCCCATGATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACTTTCTCAGTTCTGCGTaGGAGTCTACTAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYFLSSA*ESTKWL
Trigger: CAGCCACTTAGTAGACTCTCACGCAGAACTGAGAAA...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CAGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGCAAAGACCGGATGGTTaGAGAATCTGCCACTATGAG +
Preference number: 4 (lower is better)
Translates to: QAKWLQSYTKQHTGVWGWQRPDG*RICHYE
Trigger: CTCATAGTGGCAGATTCTTCAACCATCCGGTCTTTG...CCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTGGAGGCATGGTGGCTaGAGACCCCGATCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRWRHGG*RPRSCR
Trigger: CCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATTTGGTCTGGGCCCGGTaGTCTTGGGTGAAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINLVWAR*SWVKLR
Trigger: TCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAA...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCTCAGCACCTTCCTTTaGAGGACGCCTTCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVLSTFL*RTPSGR
Trigger: CCGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTTCTGTCTTCCTCCCTaGCAGGGGCCTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVFCLPP*QGPVPQ
Trigger: CTGAGGCACAGGCCCCTGGCAGGGAGGAAGACAGAA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCTGCTCTCGCCGCTGCTaGTGCTGCTGTCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVICSRRC*CCCLQR
Trigger: TCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCA...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGAGCTGCTCTCGCCGCTaGTGCTGCTGCTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGSCSRR*CCCCLQ
Trigger: TTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCT...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATCTGCGGGAACAGAGCTaGCGGTTGGCCTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNLREQS*RLALLG
Trigger: ACCAAGCAAGGCCAACCGGCAGCTCTGTTCCCGCAG...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTGGAAGGAGGGCTCGTTaGGCTTCCTCAGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLGRRAR*ASSGQR
Trigger: GCGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCC...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATTGCATCCAAGACACATaGCAGGGCTTGAATTCACCT +
Preference number: 4 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHCIQDT*QGLNSP
Trigger: AGGTGAATTCAAGCCCTGGCATGTGTCTTGGATGCA...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTACCCTGCCTGGCCATaGTCCCTGCATGAATGGCCC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVYPAWP*SLHEWP
Trigger: GGGCCATTCATGCAGGGAGCATGGCCAGGCAGGGTA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCAGTCTATTCCCCTGCTaGACATACCACCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSSLFPC*TYHLVH
Trigger: GTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACT...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTCCCCAGGTGGCTGCTaGCTTGTCTGGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSPGGC*LVWGHH
Trigger: GTGGTGACCCCAGACAAGGCAGCAGCCACCTGGGGA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCTCACCAAGGCTGGAGTaGAGGGATGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLSPRLE*RDVISA
Trigger: AGCTGAGATCACATCCCTGCACTCCAGCCTTGGTGA...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCCGAGTCAAAGTCGCTaGCATCCAGCTGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAPSQSR*HPAGRG
Trigger: ACCTCTCCCAGCTGGATGCCAGCGACTTTGACTCGG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGGTTGCTGCAGGCCTTaGGGAGTGGCTCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKGCCRP*GVAQGS
Trigger: AGACCCCTGAGCCACTCCCCAAGGCCTGCAGCAACC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTGGGCCCGGTGCTCTTaGGTGAAGCTGCGATCCTTA +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVWARCS*VKLRSL
Trigger: TAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTGTGGGCTTGTACGGTaGTGTGGTGGGTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVCGLVR*CGGWGE
Trigger: CTCACCCCACCCACCACACCACCGTACAAGCCCACA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTTCTTTGGCAGCTTGTaGGCAGCCCCTGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKFFGSL*AAPGVA
Trigger: GGCCACCCCAGGGGCTGCCCACAAGCTGCCAAAGAA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATCTCTGGGTGCTTCTTTaGCAGCTTGTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNLWVLL*QLVGSP
Trigger: GGGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAG...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATGTGGCATGTCGCAGGTaGGACAGGAGCTCACTTCGC +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNVACRR*DRSSLR
Trigger: GCGAAGTGAGCTCCTGTCCCACCTGCGACATGCCAC...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCGTGCTGTCCTTGGGTaGGGCGCCAGCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRRAVLG*GASITA
Trigger: AGCTGTGATGCTGGCGCCCCACCCAAGGACAGCACG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCTGGCACGGATCTCATaGTCTCTCAGCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVLARIS*SLSSVL
Trigger: CAGCACGCTGCTGAGAGACCATGAGATCCGTGCCAG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTACAATGCAGGCTCTGCTaGGCCTCTTTCAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVQCRLC*ASFSKL
Trigger: CAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTG...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTGGAAGGAAGGGGCGATaGGTGACGGACCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIGRKGR*VTDPAL
Trigger: AAGTGCCGGGTCCGTCACCCATCGCCCCTTCCTTCC...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGGCTGCCAGCCTCCCCTaGAAAACAGGAATGATGCAG +
Preference number: 4 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTAASLP*KTGMMQ
Trigger: CTGCATCATTCCTGTTTTCCAGGGGAGGCTGGCAGC...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGGCCTTGTCCATGGGCTaGGAGTATGCTCACCACTCA +
Preference number: 4 (lower is better)
Translates to: AQMGLTELYTWDGPWTELALSMG*EYAHHS
Trigger: TGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACATTCTTGGTAGAATCTaGACTCCCCCAACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYILGRI*TPPTLQ
Trigger: CTGGAGAGTTGGGGGAGTCCAGATTCTACCAAGAAT...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCGGTGGAGACAACCTTTaGCCACTAGATGGCGACCGC +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPGGDNL*PLDGDR
Trigger: GCGGTCGCCATCTAGTGGCCAAAGGTTGTCTCCACC...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGCCAATGCTAACAACATaGCACAAGGAGGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AQMGLTELYTWDGPWTELPMLTT*HKEARG
Trigger: CCCCCTCGCCTCCTTGTGCCATGTTGTTAGCATTGG...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATAGTCAGGGAAAGCCCTaGCTCCTATTGCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHSQGKP*LLLLRI
Trigger: AATTCTGAGCAATAGGAGCCAGGGCTTTCCCTGACT...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGAGCCTTCTTGTCTTaGGTGCTGTCCGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVGAFLS*VLSASE
Trigger: CTCACTGGCGGACAGCACCCAAGACAAGAAGGCTCC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403750.5
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCTCCTCCAAGGGTCCTaGGGCAGCCCCAACCCAGAT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLLQGS*GSPNPD
Trigger: ATCTGGGTTGGGGCTGCCCCAGGACCCTTGGAGGAG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403750.5
CDS-3UTR CCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATTATGAGTGGGCACCGTaGAGTGGCTGCAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNYEWAP*SGCSPR
Trigger: CCTTGGGCTGCAGCCACTCCACGGTGCCCACTCATA...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTATCTGCCACTATGAGTaGGCACCGTGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAICHYE*APWSGC
Trigger: GCAGCCACTCCACGGTGCCCACTCATAGTGGCAGAT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGGTTCAGTCTCTaGGTTCTCTGGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAVGFSL*VLWAPL
Trigger: CAGTGGTGCCCAGAGAACTCAGAGACTGAACCCAAC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR TCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTGACGGTAGGGTTTGCTaGCATCACAGAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCDGRVC*HHRARL
Trigger: AAGACGTGCTCTGTGATGTCAGCAAACCCTACCGTC...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTGTGACAAGGCCAGCATaGGGCACCTGGGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIVTRPA*GTWESL
Trigger: GAGACTCTCCCAGGTGCCTCATGCTGGCCTTGTCAC...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTAGTTGGGTCGCTTTGTaGCAAGGCCAGCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKASWVAL*QGQHEA
Trigger: TGCCTCATGCTGGCCTTGTCACAAAGCGACCCAACT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTGTGTGGTGGGTGGGGTaGGTCCTGCTGTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLVWWVG*VLLCHR
Trigger: TCTGTGGCACAGCAGGACTCACCCCACCCACCACAC...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGCCCAAAGTGTTTGGTaGGGCTGGCACGGATCTCAT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVAQSVW*GWHGSH
Trigger: ATGAGATCCGTGCCAGCCTCACCAAACACTTTGGGC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTTCGCTGGAGAGATTTTaGATGTACACCACGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCSLERF*MYTTRP
Trigger: AGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGA...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCATACTTGCTTTTCCCTaGCGCAGGAAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIILAFP*RRKGLF
Trigger: GAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGTAT...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTATACTTGCTTTTCCCTaGCGCAGGAAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCILAFP*RRKGLF
Trigger: GAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGTAT...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGACACATGCCAGGGCTTaGATTCACCTGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWTHARA*IHLMLV
Trigger: CACCAGCATCAGGTGAATTCAAGCCCTGGCATGTGT...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp TATGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACACTCAGGATCAAAGCTaGTGGTGCATCCAAGACACA +
Preference number: 4 (lower is better)
Translates to: YGPTPFSTPGCQGVKGTYTQDQS*WCIQDT
Trigger: TGTGTCTTGGATGCACCATCAGCTTTGATCCTGAGT...GTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGGTGTCACTGAAGTTCTaGCAGTGTGTCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: AQMGLTELYTWDGPWTELVSLKF*QCVHRH
Trigger: GTGCCTGTGGACACACTGTCAGAACTTCAGTGACAC...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGGATGGGCCATGGACTaGGCTGTCCATGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFGWAMD*AVHAEG
Trigger: TCCTTCTGCATGGACAGCTCAGTCCATGGCCCATCC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGCGGTACCTCCAAACTTaGCGAGCAGACCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMRYLQT*RADLEP
Trigger: GGGCTCCAGGTCTGCTCGTCAAGTTTGGAGGTACCG...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGAACACGGACCCAGGCTaGAGTGTTGGGGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTNTDPG*SVGVFS
Trigger: TGAGAAAACCCCAACACTTCAGCCTGGGTCCGTGTT...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATCCTTGGAGACTCCTTTaGCCAAAAATACAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LAENPHPEQELGQVREWNPWRLL*PKIQPR
Trigger: CCTGGGCTGTATTTTTGGTCAAAGGAGTCTCCAAGG...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTAGCCATTCCTTGGTTTaGCCCTGTCGCAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVSHSLV*PCRRVR
Trigger: CCTGACTCTGCGACAGGGTCAAACCAAGGAATGGCT...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp TTGGTAGCAGTCACAGGACAGGATAAGGTGGACCAGAGGCCAGAAGAGAAACAGCTGCTTCCCAAGCTTTaGGTCTTACTAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LVAVTGQDKVDQRPEEKQLLPKL*VLLDCG
Trigger: GCCACAGTCTAGTAAGACTCAAAGCTTGGGAAGCAG...CTGTTTCTCTTCTGGCCTCTGGTCCACCTTATCCTGTCCTGTGACTGCTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGGCTGTGCACATGACTaGATCTTCCTAGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAGCAHD*IFLEAV
Trigger: CACGGCCTCTAGGAAGATTCAGTCATGTGCACAGCC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp TCTACTTCCCCCAACAGCTTCTCGTCCATTAGTAACCTGCTGCAGTGCCACATAAGGAAGGGCCTCTTCTaGATTGGAATCTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: STSPNSFSSISNLLQCHIRKGLF*IGIWAW
Trigger: CCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCT...TATGTGGCACTGCAGCAGGTTACTAATGGACGAGAAGCTGTTGGGGGAAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGGTCTTGGTGAGCTCTaGCAGGAGGGCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFGLGEL*QEGLIL
Trigger: GAGAATGAGGCCCTCCTGGCAGAGCTCACCAAGACC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCCAGGAGGAGCTTCTaGAGCAGTGAGAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKARRSF*SSESSS
Trigger: GGACGAGCTCTCACTGCTGCAGAAGCTCCTCCTGGC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTTGGTCTGGGCCCGGTaGTCTTGGGTGAAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLVWAR*SWVKLR
Trigger: TCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTGCTCAAAGCTCTTCTTaGCAAAAGTTGGGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSAQSSS*QKLGRF
Trigger: AAAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGC...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGATCCACTGTCAAGGTCTaGTCAAAGCTCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGSTVKV*SKLFLP
Trigger: TGGCAAGAAGAGCTTTGAGCAGACCTTGACAGTGGA...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCATACTCAGGGCTCTTaGAGGAGGCCAGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVHTQGS*RRPGLP
Trigger: AGGAAGACCTGGCCTCCTGCAAGAGCCCTGAGTATG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCTGCGGGAACAGAGCTaGCGGTTGGCCTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRLREQS*RLALLG
Trigger: ACCAAGCAAGGCCAACCGGCAGCTCTGTTCCCGCAG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATTCCTGGCGTGCCGGATaGTTGGCGTTCTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINSWRAG*LAFCLN
Trigger: GTTCAGACAGAACGCCAAGCATCCGGCACGCCAGGA...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCTATGTCATGTCCCAATaGCACGCTCAGGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCYVMSQ*HAQVSA
Trigger: AGCAGAGACCTGAGCGTGGCATTGGGACATGACATA...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGGGTCAGCAGCTGGGCTaGCAGTATTGCAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWGQQLG*QYCSYS
Trigger: ACTGTAACTGCAATACTGGCAGCCCAGCTGCTGACC...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TCTACTTCCCCCAACAGCTTCTCGTCCATTAGTAACCTGCTGCAGTGCCACATACGGGGCTGTACTGGTTaGGTTCAGTCTCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: STSPNSFSSISNLLQCHIRGCTG*VQSLSS
Trigger: AGAACTCAGAGACTGAACCCAACCAGTACAGCCCCG...TATGTGGCACTGCAGCAGGTTACTAATGGACGAGAAGCTGTTGGGGGAAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCATGTTGGGTAGGATGTaGCCAGGAGGAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIMLGRM*PGGASA
Trigger: TGCAGAAGCTCCTCCTGGCCACATCCTACCCAACAT...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGACTCTGGAGGCATGGTaGCTGCAGACCCCGATCCTG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKTLEAW*LQTPIL
Trigger: CAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGACTCTGGAGGCATGGTaGCTGCAGACCCCGATCCTG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRTLEAW*LQTPIL
Trigger: CAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTGGGCCCGGTGCTCTTaGGTGAAGCTGCGATCCTTA +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFWARCS*VKLRSL
Trigger: TAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCA...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCTACGTCGTAGGCCTTaGGAGCCAGGCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRLRRRP*EPGTVR
Trigger: CCTCACTGTGCCTGGCTCCCAAGGCCTACGACGTAG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATTGTGGGCTTGTACGGTaGTGTGGTGGGTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYCGLVR*CGGWGE
Trigger: CTCACCCCACCCACCACACCACCGTACAAGCCCACA...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGGAGCTCACTTCGCTCTaGGTGCTTCTTTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWELTSL*VLLWQL
Trigger: AAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCTC...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCGAGCTCACTTCGCTCTaGGTGCTTCTTTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIELTSL*VLLWQL
Trigger: AAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCTC...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTGGCATGTCGCAGGTaGGACAGGAGCTCACTTCGC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRVACRR*DRSSLR
Trigger: GCGAAGTGAGCTCCTGTCCCACCTGCGACATGCCAC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATTTGCAGGACGCCTTCTaGTCGGAGCACCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNLQDAF*SEHLAV
Trigger: TACTGCCAGGTGCTCCGACCAGAAGGCGTCCTGCAA...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCGTAGTCAGTGTATCTaGGCCAGCAGAAGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKARSQCI*ASRSAG
Trigger: TCCGGCACTTCTGCTGGCCCAGATACACTGACTACG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTACTTGGAGCATGAGCTaGGCACAAGATGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVTWSMS*AQDGGS
Trigger: GGAGCCCCCATCTTGTGCCCAGCTCATGCTCCAAGT...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCAGGGAGTTTTCTCTCATaGAACGGAACATCACAGACA +
Preference number: 4 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPGSFLS*NGTSQT
Trigger: TGTCTGTGATGTTCCGTTCCATGAGAGAAAACTCCC...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCACACATCCATGCATGTaGGTTTCCAACTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSTHPCM*VSNSAA
Trigger: AGCTGCAGAGTTGGAAACCCACATGCATGGATGTGT...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTATCCCATGGTGGTTCTaGGCCAAGGACACATCCATG +
Preference number: 4 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLIPWWF*AKDTSM
Trigger: CATGGATGTGTCCTTGGCCCAGAACCACCATGGGAT...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCCTTTGCCTACTTCCTaGGTGTCTTGTAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVPLPTS*VSCSRL
Trigger: GAGCCGGCTACAAGACACCCAGGAAGTAGGCAAAGG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TATGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACGGCAAAGTGCTGAGGTaGAAACTGACCAATTCCCTT +
Preference number: 4 (lower is better)
Translates to: YGPTPFSTPGCQGVKGTYGKVLR*KLTNSL
Trigger: AAGGGAATTGGTCAGTTTCCACCTCAGCACTTTGCC...GTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACATCCCAAAGTTCACGATaGACAGCAGGGTGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTSQSSR*TAGWPK
Trigger: TTTCGGCCACCCTGCTGTCCATCGTGAACTTTGGGA...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGGCCTCTTCTGAATTaGAATCTGGGCATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVGPLLN*NLGMGV
Trigger: CACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
3UTR CAA 72 bp TCTTGGATAAGGCAACTCAGCCAGGACACAGTGGGATaGAACCTACTGCTGGTTGGTTCTTGCAGAGAACCC +
Preference number: 4 (lower is better)
Translates to: SWIRQLSQDTVG*NLLLVGSCREP
Trigger: GGGTTCTCTGCAAGAACCAACCAGCAGTAGGTTCAATCCCACTGTGTCCTGGCTGAGTTGCCTTATCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp GGAGACAACCTTTGGCCACTAGATGGCGACCGCATGTaGATAAGGCAAAGTGCTGAGGTGGAAACTGACCAA +
Preference number: 4 (lower is better)
Translates to: GDNLWPLDGDRM*IRQSAEVETDQ
Trigger: TTGGTCAGTTTCCACCTCAGCACTTTGCCTTATCAACATGCGGTCGCCATCTAGTGGCCAAAGGTTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp AGGCTGGCTACAGACACCTTCTTTAGAAACCTGGGGTaGGGGAGAGGGCTCGTGTTGGTTTCAACATTAGCA +
Preference number: 4 (lower is better)
Translates to: RLATDTFFRNLG*GRGLVLVSTLA
Trigger: TGCTAATGTTGAAACCAACACGAGCCCTCTCCCCAACCCCAGGTTTCTAAAGAAGGTGTCTGTAGCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTAGCACTGTGCCGAGGTaGGGTGCTTATGTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKASTVPR*GAYVVL
Trigger: CAGAACTACATAAGCACCTCACCTCGGCACAGTGCT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR TCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCGACGGTAGGGTTTGCTaGCATCACAGAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPDGRVC*HHRARL
Trigger: AAGACGTGCTCTGTGATGTCAGCAAACCCTACCGTC...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGAGTGGGGCTGACCCCTaGGTCCTCTTCTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSGADP*VLFFIV
Trigger: GACGATGAAGAAGAGGACTCAGGGGTCAGCCCCACT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGAGTGGGGCTGACCCCTaGGTCCTCTTCTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSGADP*VLFFIV
Trigger: GACGATGAAGAAGAGGACTCAGGGGTCAGCCCCACT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCAGAGCAAGTGGGGCTaGCCCCTGAGTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRQSKWG*PLSPLL
Trigger: AAGAAGAGGACTCAGGGGTCAGCCCCACTTGCTCTG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCAGAGCAAGTGGGGCTaGCCCCTGAGTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKQSKWG*PLSPLL
Trigger: AAGAAGAGGACTCAGGGGTCAGCCCCACTTGCTCTG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCTCTGCTCTCACATCTaGAGTTCCTTCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVLCSHI*SSFEWL
Trigger: CAGCCACTCGAAGGAACTTCAGATGTGAGAGCAGAG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTCGCTGGAGAGATTTTaGATGTACACCACGCGGCCT +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKASLERF*MYTTRP
Trigger: AGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCATACTTGCTTTTCCCTaGCGCAGGAAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPILAFP*RRKGLF
Trigger: GAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGTAT...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCCCTTGTCTGAGGTATTaGGGTATTCCTCGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCPCLRY*GIPRGL
Trigger: TAACCCTCGAGGAATACCTCAATACCTCAGACAAGG...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGTGGGTAACCCCAAACTaGAGGCAGCTGCTAAATCTC +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWWVTPN*RQLLNL
Trigger: GAGATTTAGCAGCTGCCTTCAGTTTGGGGTTACCCA...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCATTCCTTAATCATATCTaGTGCTGGGATGTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPFLNHI*CWDVGN
Trigger: GTTACCCACATCCCAGCATCAGATATGATTAAGGAA...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTACCCTAGTGTTGCACTaGTCTCTGAACACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPTLVLH*SLNTKA
Trigger: TGCCTTTGTGTTCAGAGATCAGTGCAACACTAGGGT...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGCTTCTTATCTTGCCTTaGGGGCAGAATTCGGACCAC +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWLLILP*GQNSDH
Trigger: GTGGTCCGAATTCTGCCCTCAAGGCAAGATAAGAAG...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTACCACCTTGCCCAGTTaGTTAAGGCTGGCTACAGAC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKATTLPS*LRLATD
Trigger: GTCTGTAGCCAGCCTTAATCAACTGGGCAAGGTGGT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATTTCTCTGGGCACCACTaGAGCTCCCCAAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYFSGHH*SSPKQV
Trigger: CACCTGCTTTGGGGAGCTGCAGTGGTGCCCAGAGAA...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTTCTCTGGGCACCACTaGAGCTCCCCAAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKFSGHH*SSPKQV
Trigger: CACCTGCTTTGGGGAGCTGCAGTGGTGCCCAGAGAA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGGTCTTGGTGAGCTCTaGCAGGAGGGCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKGLGEL*QEGLIL
Trigger: GAGAATGAGGCCCTCCTGGCAGAGCTCACCAAGACC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCTGCAGGCAGCACTGTaGCGAGGTGAGGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRLQAAL*RGEVLM
Trigger: CATAAGCACCTCACCTCGGCACAGTGCTGCCTGCAG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTAGTTGCACCATCGCCTaGATGTCTTCCTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVSCTIA*MSSWET
Trigger: GGTTTCCCAGGAAGACATGCAGGCGATGGTGCAACT...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTCACTTCGCTCTGGGTaGTTCTTTGGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKASLRSG*FFGSLW
Trigger: CCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCTCAGCACCTTCCTTTaGAGGACGCCTTCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRLSTFL*RTPSGR
Trigger: CCGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCATACTCAGGGCTCTTaGAGGAGGCCAGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVHTQGS*RRPGLP
Trigger: AGGAAGACCTGGCCTCCTGCAAGAGCCCTGAGTATG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTGCTCTCGCCGCTGCTaGTGCTGCTGTCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVCSRRC*CCCLQR
Trigger: TCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGAGCTGCTCTCGCCGCTaGTGCTGCTGCTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSCSRR*CCCCLQ
Trigger: TTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTCCTGGCGTGCCGGATaGTTGGCGTTCTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMSWRAG*LAFCLN
Trigger: GTTCAGACAGAACGCCAAGCATCCGGCACGCCAGGA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTCCTGGCGTGCCGGATaGTTGGCGTTCTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSWRAG*LAFCLN
Trigger: GTTCAGACAGAACGCCAAGCATCCGGCACGCCAGGA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCAAGAGACGTCTCACTaGATCTCCTCCCACGTCAGA +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPQETSH*ISSHVR
Trigger: TCTGACGTGGGAGGAGATGCAGTGAGACGTCTCTTG...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCTGTCCATGCCTTCCCTaGCCTTTTACTCACCACTGC +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPCPCLP*PFTHHC
Trigger: GCAGTGGTGAGTAAAAGGGCAGGGAAGGCATGGACA...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCCTTCTTGTCTTGGGTaGTGTCCGCCAGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVPSCLG*CPPVRA
Trigger: AGCTCTCACTGGCGGACAGCACCCAAGACAAGAAGG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403750.5
CDS-3UTR CCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATTCGCTGGCATCCAGCTaGGAGAGGTCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINSLASS*ERSSSG
Trigger: TCCAGAACTTGACCTCTCCCAGCTGGATGCCAGCGA...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCTTCTCACTGTCAATCTaGAAGAGCTCGGAGTCATCG +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCFSLSI*KSSESS
Trigger: CGATGACTCCGAGCTCTTCCAGATTGACAGTGAGAA...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CAGAGCCTTTCTAGCTCCAACACCCTACAACTCTACTTCCCCCAACAGCTTCTCTTCTCACTGTCAATCTaGAAGAGCTCGGAGTCATCG +
Preference number: 4 (lower is better)
Translates to: QSLSSSNTLQLYFPQQLLFSLSI*KSSESS
Trigger: CGATGACTCCGAGCTCTTCCAGATTGACAGTGAGAA...GAGAAGCTGTTGGGGGAAGTAGAGTTGTAGGGTGTTGGAGCTAGAAAGGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTGGGCCCGGTGCTCTTaGGTGAAGCTGCGATCCTTA +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRWARCS*VKLRSL
Trigger: TAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGAGGGATCCTCCTCTGTaGGCTTGTACGGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRRDPPL*ACTVVW
Trigger: CCACACCACCGTACAAGCCCACAGAGGAGGATCCCT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTTGCAGGACGCCTTCTaGTCGGAGCACCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMLQDAF*SEHLAV
Trigger: TACTGCCAGGTGCTCCGACCAGAAGGCGTCCTGCAA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTTGCAGGACGCCTTCTaGTCGGAGCACCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLQDAF*SEHLAV
Trigger: TACTGCCAGGTGCTCCGACCAGAAGGCGTCCTGCAA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCTGGCACGGATCTCATaGTCTCTCAGCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLARIS*SLSSVL
Trigger: CAGCACGCTGCTGAGAGACCATGAGATCCGTGCCAG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTAACAGAGCTGCCGGTTaGCCTTGCTTGGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCINRAAG*PCLVGS
Trigger: AGAGCCCACCAAGCAAGGCCAACCGGCAGCTCTGTT...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGAACAGAGCTGCCGGTTaGCCTTGCTTGGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKNRAAG*PCLVGS
Trigger: AGAGCCCACCAAGCAAGGCCAACCGGCAGCTCTGTT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCGTAGTCAGTGTATCTaGGCCAGCAGAAGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVRSQCI*ASRSAG
Trigger: TCCGGCACTTCTGCTGGCCCAGATACACTGACTACG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATGGAACGTCAACACCATaGAAACTCACAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: LAENPHPEQELGQVREWNGTSTP*KLTDRS
Trigger: GCTTCTGTCTGTGAGTTTCCATGGTGTTGACGTTCC...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCAGCAGGGCAGCTCAGTaGCAAACACCTCATGACAGT +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPSRAAQ*QTPHDS
Trigger: ACTGTCATGAGGTGTTTGCCACTGAGCTGCCCTGCT...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACAACCCAGCCAGCATATaGTTTTGTGTGATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYNPASI*FCVIVG
Trigger: TCCAACAATCACACAAAACCATATGCTGGCTGGGTT...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCGAGATGGTTGCCAATaGCAGCTGCTCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRRDGCQ*QLLPLG
Trigger: ACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGAGAGCTACAACGAGATaGTTGCCAATGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWRATTR*LPMAAA
Trigger: AGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCT...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCCCCAGGCTGAAGTGTTaGGGTTTTCTCAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCPRLKC*GFLKVL
Trigger: AAGCACTTTGAGAAAACCCCAACACTTCAGCCTGGG...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTACCCTGAACAGGAGCTaGGTCAAGTCAGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLTLNRS*VKSENG
Trigger: TCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGT...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGCGATGGACAGCAGGGTaGCCGAAAGGATTTATTTGC +
Preference number: 4 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWRWTAG*PKGFIC
Trigger: GCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCG...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCTTACTAGACTGTGGCTaGGTTTCAGGGGCTTACCGT +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVILLDCG*VSGAYR
Trigger: ACGGTAAGCCCCTGAAACCCAGCCACAGTCTAGTAA...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGAGTCTTACTAGACTGTaGCTGGGTTTCAGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMSLTRL*LGFRGL
Trigger: TAAGCCCCTGAAACCCAGCCACAGTCTAGTAAGACT...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATGCAGCTCCAACCTCTTaGGTTCAGGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNAAPTS*VQVILP
Trigger: TGGGAGGATCACCTGAACCCAAGAGGTTGGAGCTGC...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGATCTGCCACTATGAGTaGGCACCGTGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRICHYE*APWSGC
Trigger: GCAGCCACTCCACGGTGCCCACTCATAGTGGCAGAT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp CAGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGCTTACAAAGACCGGATaGTTGAAGAATCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: QAKWLQSYTKQHTGVWGWLTKTG*LKNLPL
Trigger: TAGTGGCAGATTCTTCAACCATCCGGTCTTTGTAAG...CCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CAA 72 bp ACTCAAGAGTCTGAGTACAAATGGATAGACACACACTaGGAGCATGAGCTGGGCACAAGATGGGGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: TQESEYKWIDTH*EHELGTRWGLL
Trigger: TAGGAGCCCCCATCTTGTGCCCAGCTCATGCTCCAAGTGTGTGTCTATCCATTTGTACTCAGACTCTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp CCAATGGCAGCTGCTCCCTCTGGGTTACTCCTCAATTaGGTGGGAAAGAGACCAAGGTTCACTCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PMAAAPSGLLLN*VGKRPRFTRFS
Trigger: AGAAAAACGAGTGAACCTTGGTCTCTTTCCCACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCCATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTCTGGGTGTCAGAGCTTaGTGTTGGGTAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCILGVRA*CWVGCG
Trigger: GCCACATCCTACCCAACATCAAGCTCTGACACCCAG...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTTAACACAAGGCCGTTaGCTTTTAGATCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSLTQGR*LLDLRP
Trigger: AGGCCTCAGATCTAAAAGTCAACGGCCTTGTGTTAA...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTACAACTTCGGCTCTaGGACTGCATCATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRVQLRL*DCIMGA
Trigger: GGCTCCCATGATGCAGTCTCAGAGCCGAAGTTGTAC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR TCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTGTGCATGTAGCGTATaGGTTGCACCATCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVCACSV*VAPSPA
Trigger: TGCAGGCGATGGTGCAACTCATACGCTACATGCACA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR TCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGACGGTAGGGTTTGCTaGCATCACAGAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINDGRVC*HHRARL
Trigger: AAGACGTGCTCTGTGATGTCAGCAAACCCTACCGTC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGACGGTAGGGTTTGCTaGCATCACAGAGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVDGRVC*HHRARL
Trigger: AAGACGTGCTCTGTGATGTCAGCAAACCCTACCGTC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGAGTTGGGTCGCTTTGTaGCAAGGCCAGCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSWVAL*QGQHEA
Trigger: TGCCTCATGCTGGCCTTGTCACAAAGCGACCCAACT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCCCAAAGTGTTTGGTaGGGCTGGCACGGATCTCAT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKAQSVW*GWHGSH
Trigger: ATGAGATCCGTGCCAGCCTCACCAAACACTTTGGGC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTATACTTGCTTTTCCCTaGCGCAGGAAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVILAFP*RRKGLF
Trigger: GAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGTAT...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCAGGTACTCAAGAGTCTaGGTACAAATGGATAGACAC +
Preference number: 4 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSRYSRV*VQMDRH
Trigger: GTGTCTATCCATTTGTACTCAGACTCTTGAGTACCT...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCACCTGAGTGGTGTGATTaGTTAGTTATGTCTGTATTG +
Preference number: 4 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPPEWCD*LVMSVL
Trigger: CAATACAGACATAACTAATCAATCACACCACTCAGG...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCATACACAGCACCGAATaGGTCCTTCGGGATAGAGGT +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPIHSTE*VLRDRG
Trigger: ACCTCTATCCCGAAGGACTCATTCGGTGCTGTGTAT...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCTACATCCTCTGGGGCTaGTTTTGCTTCACAGTTAGG +
Preference number: 4 (lower is better)
Translates to: KTKAALNICSAINASCCPYILWG*FCFTVR
Trigger: CCTAACTGTGAAGCAAAATCAGCCCCAGAGGATGTA...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTGGAGTGCAGGGATGTaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRWSAGM*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACATCCCTGCACTCCA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAGGAAGGGCCTCTTCTaGATTGGAATCTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVRKGLF*IGIWAW
Trigger: CCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCT...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATTCACTTCGCTCTGGGTaGTTCTTTGGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNSLRSG*FFGSLW
Trigger: CCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGA...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTGCTCTCGCCGCTGCTaGTGCTGCTGTCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRCSRRC*CCCLQR
Trigger: TCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCCCATGGCTTCATACTTaGTTTTCCCTGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIPWLHT*FSLTQE
Trigger: TTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGG...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTTATCAATGCAGGCTCTaGTGGGCCTCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCYQCRL*WASFSK
Trigger: CTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATA...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGCTGCCCGCAAAGCCCTaGCTCTCTCCTGAGTACATA +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMLPAKP*LSPEYI
Trigger: TATGTACTCAGGAGAGAGGCAGGGCTTTGCGGGCAG...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTCCCCAGTGGGCCTACTaGACATGTCTAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFPQWAY*TCLGEI
Trigger: GATTTCTCCTAGACATGTGCAGTAGGCCCACTGGGG...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGGGACCAGGCTGTCCATaGCTTCCCTGCCCTTTTACT +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMGPGCP*LPCPFT
Trigger: AGTAAAAGGGCAGGGAAGGCATGGACAGCCTGGTCC...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACGGACAGTACGACCTGCCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAGACATTCACTTTCTTTaGTGTTGTACATCCAATTTC +
Preference number: 4 (lower is better)
Translates to: KRTVRPALCGRLSTQSTADIHFL*CCTSNF
Trigger: GAAATTGGATGTACAACAGCAAAGAAAGTGAATGTC...TGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGGCAGGTCGTACTGTCCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACAAGTCTACTAAGTGGCTaGTTCTGGAGTCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTSLLSG*FWSLLT
Trigger: GGTCAGAAGACTCCAGAAGCAGCCACTTAGTAGACT...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCAGCAGTCTATTCCCCTaGTGCACATACCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPSSLFP*CTYHLV
Trigger: GACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCT...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTGGAGAGGTCAAGTTCTaGAAAGTCAGCATAGAGTTG +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPGEVKF*KVSIEL
Trigger: CAACTCTATGCTGACTTTCCAGAACTTGACCTCTCC...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAGGAGAGGTCAAGTTCTaGAAAGTCAGCATAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVGEVKF*KVSIEL
Trigger: CAACTCTATGCTGACTTTCCAGAACTTGACCTCTCC...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGCGGTCCCTTCCTTCTaGGTGTCAGAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFAVPSF*VSELDV
Trigger: AACATCAAGCTCTGACACCCAGAAGGAAGGGACCGC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGAGGCATAAACAGGCGTaGCCAGACGGTAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKRHKQA*PDGRVC
Trigger: GCAAACCCTACCGTCTGGCCACGCCTGTTTATGCCT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAACTATGCTTGATGTCTaGTTTGAAGGGATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVTMLDV*FEGILL
Trigger: GAGGAGGATCCCTTCAAACCAGACATCAAGCATAGT...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGAGCTCACTTCGCTCTaGGTGCTTCTTTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVELTSL*VLLWQL
Trigger: AAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCTC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTATGTATTTGCCATCTTaGGCTAGACACTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLMYLPS*ARHCLS
Trigger: GCTGAGGCAGTGTCTAGCCCAAGATGGCAAATACAT...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGGGGAGTGTTACGCCATaGAATAGCATTAGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: AQMGLTELYTWDGPWTELGSVTP*NSIRGV
Trigger: AACTCCCCTAATGCTATTCCATGGCGTAACACTCCC...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCAGGGAGGGACAGACTaGTCCTTTGCTAAAACTCTC +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVQGGTD*SFAKTL
Trigger: GAGAGTTTTAGCAAAGGACCAGTCTGTCCCTCCCTG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGGCAGCTGCTCCCTCTaGGTTACTCCTCAATTTGGT +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFGSCSL*VTPQFG
Trigger: ACCAAATTGAGGAGTAACCCAGAGGGAGCAGCTGCC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCTTGACGAGCAGACCTaGAGCCCATCTGTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPLDEQT*SPSVCK
Trigger: TTTACACACAGATGGGCTCCAGGTCTGCTCGTCAAG...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTCAGACTGCACTAAGCTaGACTTCTGGATGGTCATCT +
Preference number: 4 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLQTALS*TSGWSS
Trigger: AGATGACCATCCAGAAGTCCAGCTTAGTGCAGTCTG...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTACCAAGCAGCACACTaGGGTGTGGGGATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKYQAAH*GVGMEA
Trigger: AGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAAGTCTTCAGGCAAAGTaGCTGCAAAGTTATACCAAG +
Preference number: 4 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGSLQAK*LQSYTK
Trigger: CTTGGTATAACTTTGCAGCCACTTTGCCTGAAGACT...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCAGGACAGGATAAGGTaGACCAGAGGCCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVQDRIR*TRGQKR
Trigger: TCTCTTCTGGCCTCTGGTCCACCTTATCCTGTCCTG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
3UTR CAA 72 bp CTGGACTTCTGGATGGTCATCTTCCCCAGAAACCATTaGGAAATCCAAGCAGTCTATTCCCCTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: LDFWMVIFPRNH*EIQAVYSPAAH
Trigger: ATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTGTGCATGTAGCGTATaGGTTGCACCATCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMCACSV*VAPSPA
Trigger: TGCAGGCGATGGTGCAACTCATACGCTACATGCACA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTCACAGAGCACGTCTTaGGCCAGAAGTTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMSQSTS*ARSSLR
Trigger: TCTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTCACAGAGCACGTCTTaGGCCAGAAGTTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSQSTS*ARSSLR
Trigger: TCTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTCTCTGCTCTCACATCTaGAGTTCCTTCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCILCSHI*SSFEWL
Trigger: CAGCCACTCGAAGGAACTTCAGATGTGAGAGCAGAG...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCTCTGCTCTCACATCTaGAGTTCCTTCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLCSHI*SSFEWL
Trigger: CAGCCACTCGAAGGAACTTCAGATGTGAGAGCAGAG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTTCGCTGGAGAGATTTTaGATGTACACCACGCGGCCT +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCISLERF*MYTTRP
Trigger: AGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGA...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTCGCTGGAGAGATTTTaGATGTACACCACGCGGCCT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSLERF*MYTTRP
Trigger: AGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCAGGAAGGGCCTCTTCTaGATTGGAATCGTAGTCAGT +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPRKGLF*IGIVVS
Trigger: ACTGACTACGATTCCAATTCAGAAGAGGCCCTTCCT...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTAGGAAGGGCCTCTTCTaGATTGGAATCGTAGTCAGT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVRKGLF*IGIVVS
Trigger: ACTGACTACGATTCCAATTCAGAAGAGGCCCTTCCT...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000403750.5
CDS-3UTR TCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCCTTGTCTGAGGTATTaGGGTATTCCTCGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAPCLRY*GIPRGL
Trigger: TAACCCTCGAGGAATACCTCAATACCTCAGACAAGG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTTTTCCCGAGGAACCCTaGTGTATGAAAGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPFPEEP*CMKEIR
Trigger: TCTGATTTCTTTCATACATCAGGGTTCCTCGGGAAA...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATAGAGGTCAACTGCTGTaGCACACAACAGTTCAAATT +
Preference number: 4 (lower is better)
Translates to: LAENPHPEQELGQVREWNRGQLL*HTTVQI
Trigger: AATTTGAACTGTTGTGTGTCACAGCAGTTGACCTCT...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCGAGAATGGGGATTCTaGTTCAGCCTTGTACAGACT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVREWGF*FSLVQT
Trigger: AGTCTGTACAAGGCTGAATCAGAATCCCCATTCTCG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCCCACAGTGGGAGTTTaGGAAAAGAAGCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVPTVGV*EKKPVL
Trigger: CAGAACTGGCTTCTTTTCTCAAACTCCCACTGTGGG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGAGTTGCACCATCGCCTaGATGTCTTCCTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSCTIA*MSSWET
Trigger: GGTTTCCCAGGAAGACATGCAGGCGATGGTGCAACT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACATCTTTGCCTAGACTATaGTTGATGTCTGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTSLPRL*LMSGLK
Trigger: CTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGA...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTCACTTCGCTCTGGGTaGTTCTTTGGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMSLRSG*FFGSLW
Trigger: CCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTCACTTCGCTCTGGGTaGTTCTTTGGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSLRSG*FFGSLW
Trigger: CCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCTATCAATGCAGGCTCTaGTGGGCCTCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPYQCRL*WASFSK
Trigger: CTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATA...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTATCAATGCAGGCTCTaGTGGGCCTCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAYQCRL*WASFSK
Trigger: CTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCATGGGCTGGGAGTATaGTCACCACTCAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKHGLGV*SPLSGR
Trigger: TCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGATGCAGCGCGATCAATaGCTCCTGTTGCCCCATATG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKMQRDQ*LLLPHM
Trigger: CATATGGGGCAACAGGAGGCATTGATCGCGCTGCAT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGGCTGCCCTAAACATATaGAGCGCGATCAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMAALNI*SAINAS
Trigger: GGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGC...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTTCTTTGAGGAGTTGTTaGACAGCCCAGGGACCGACC +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLSLRSC*TAQGPT
Trigger: GGTCGGTCCCTGGGCTGTGCAACAACTCCTCAAAGA...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCCTGTACCATCAAGGCTaGATTGGATTCTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: GRALSEVLRYSSRVKAVILYHQG*IGFSPV
Trigger: TACTGGAGAGAATCCAATGCAGCCTTGATGGTACAG...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTTCGCTGGCATCCAGCTaGGAGAGGTCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLSLASS*ERSSSG
Trigger: TCCAGAACTTGACCTCTCCCAGCTGGATGCCAGCGA...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCGGGGCTGTACTGGTTaGGTTCAGTCTCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRRGCTG*VQSLSS
Trigger: AGAACTCAGAGACTGAACCCAACCAGTACAGCCCCG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGGAGCCTTCTTGTCTTaGGTGCTGTCCGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRGAFLS*VLSALT
Trigger: TGTTAAGGCGGACAGCACCCAAGACAAGAAGGCTCC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS-3UTR CCA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGACTATGCTTGATGTCTaGTTTGAAGGGATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AQMGLTELYTWDGPWTELTMLDV*FEGILL
Trigger: GAGGAGGATCCCTTCAAACCAGACATCAAGCATAGT...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTACTATGCTTGATGTCTaGTTTGAAGGGATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCTMLDV*FEGILL
Trigger: GAGGAGGATCCCTTCAAACCAGACATCAAGCATAGT...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATCAATGCAGGCTCTGCTaGGCCTCTTTCAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYQCRLC*ASFSKL
Trigger: CAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTG...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCAATGCAGGCTCTGCTaGGCCTCTTTCAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKQCRLC*ASFSKL
Trigger: CAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTACACTAATGTGGCAGTaGAACGTCAACACCATGGAA +
Preference number: 4 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLTLMWQ*NVNTME
Trigger: TTCCATGGTGTTGACGTTCCACTGCCACATTAGTGT...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATGAGTCTGAGTACAAATaGATAGACACACACTTGGAG +
Preference number: 4 (lower is better)
Translates to: LAENPHPEQELGQVREWNESEYK*IDTHLE
Trigger: CTCCAAGTGTGTGTCTATCCATTTGTACTCAGACTC...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTACTCATACCCTGCCTaGCCATGCTCCCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKYSYPA*PCSLHE
Trigger: TTCATGCAGGGAGCATGGCCAGGCAGGGTATGAGTA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTACTGAACTCTATACCTaGGATGGGCCATGGACTGAG +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFTELYT*DGPWTE
Trigger: CTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGT...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATCATCTGGGTAGCTGGTaGAGACAACCTTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYHLGSW*RQPLAT
Trigger: AGTGGCCAAAGGTTGTCTCCACCAGCTACCCAGATG...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp TCTACTTCCCCCAACAGCTTCTCGTCCATTAGTAACCTGCTGCAGTGCCACATACCATCAAGGCTGCATTaGATTCTCTCCAGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: STSPNSFSSISNLLQCHIPSRLH*ILSSKC
Trigger: ACACTTACTGGAGAGAATCCAATGCAGCCTTGATGG...TATGTGGCACTGCAGCAGGTTACTAATGGACGAGAAGCTGTTGGGGGAAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTACTGATTCCCATAAATaGACATGCAGCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVTDSHK*TCSQGQ
Trigger: CTGCCCTTGGCTGCATGTCCATTTATGGGAATCAGT...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGGGGTTTCACCATGTTaGCCACGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKGVSPC*PRWSRS
Trigger: AGATCGAGACCATCGTGGCCAACATGGTGAAACCCC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR TCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATCCTTGTCTGAGGTATTaGGGTATTCCTCGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINPCLRY*GIPRGL
Trigger: TAACCCTCGAGGAATACCTCAATACCTCAGACAAGG...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTTCTCAGTTCTCTCCTTaGTGTAAATCAGGACTTAAC +
Preference number: 4 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPSQFSP*CKSGLN
Trigger: GTTAAGTCCTGATTTACATCAAGGAGAGAACTGAGA...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCTGTCCTAGGTTAATCTaGCATGAAAGGACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCCPRLI*HERTAL
Trigger: TAAAGCTGTCCTTTCATGTCAGATTAACCTAGGACA...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATCAAAGACCGGATGGTTaGAGAATCTGCCACTATGAG +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINQRPDG*RICHYE
Trigger: CTCATAGTGGCAGATTCTTCAACCATCCGGTCTTTG...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTGTGCCGAGGTGAGGTaGTTATGTAGTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVCAEVR*LCSSVQ
Trigger: TTGTACAGAACTACATAAGCACCTCACCTCGGCACA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGCTCAAAGCTCTTCTTaGCAAAAGTTGGGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAAQSSS*QKLGRF
Trigger: AAAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTATGGTGAACACAGCTaGAAGTCTACGAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVYGEHS*KSTRGS
Trigger: ACTTCCTCTCGTAGACTTGCAGCTGTGTTCACCATA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTCCAGAGAGGTCAACTaGTGTGACACACAACAGTTC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVSREVN*CDTQQF
Trigger: GAACTGTTGTGTGTCACAGCAGTTGACCTCTCTGGA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATAGCCCTGGCTCCTATTaGTCAGAATTCTCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYSPGSY*SEFSRL
Trigger: CAGCCTAGAGAATTCTGAGCAATAGGAGCCAGGGCT...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGTTCAAGGAAGGCACTaGTTCCCAAGCTTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RALSEVLRYSSRVKAVINVQGRH*FPSFES
Trigger: AGACTCAAAGCTTGGGAAGCAGTGCCTTCCTTGAAC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR GCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTTCAGGCAAAGTGGCTaGAAAGTTATACCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAFRQSG*KVIPSS
Trigger: GCTGCTTGGTATAACTTTGCAGCCACTTTGCCTGAA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTCGGGGCTGTACTGGTTaGGTTCAGTCTCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLRGCTG*VQSLSS
Trigger: AGAACTCAGAGACTGAACCCAACCAGTACAGCCCCG...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTTCTCACTGTCAATCTaGAAGAGCTCGGAGTCATCG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVFSLSI*KSSESS
Trigger: CGATGACTCCGAGCTCTTCCAGATTGACAGTGAGAA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTCTGAGACTGCATCATaGGAGCCTTCTTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSETAS*EPSCLG
Trigger: CCCAAGACAAGAAGGCTCCCATGATGCAGTCTCAGA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGGGGAGCTCATGTCGCTaGAGAGATTTTGAATGTACA +
Preference number: 4 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGGSSCR*RDFECT
Trigger: TGTACATTCAAAATCTCTCCAGCGACATGAGCTCCC...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGGGAGCTCATGTCGCTaGAGAGATTTTGAATGTACA +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAGSSCR*RDFECT
Trigger: TGTACATTCAAAATCTCTCCAGCGACATGAGCTCCC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGGGCCTCTTCTGAATTaGAATCGTAGTCAGTGTATC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAGPLLN*NRSQCI
Trigger: GATACACTGACTACGATTCCAATTCAGAAGAGGCCC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000403750.5
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGATCAGGTCTGTGCTGTaGGAAGTCCCTTTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKIRSVL*EVPFWS
Trigger: GGACCAAAAAGGGACTTCCCACAGCACAGACCTGAT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGTTACTCCTCAATTTaGTGGGAAAGAGACCAAGGT +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVGYSSI*WERDQG
Trigger: ACCTTGGTCTCTTTCCCACCAAATTGAGGAGTAACC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTACCAATGAGCAAGGGTaGTCAAGTGAAAAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HIGRALSEVLRYSSRVKATNEQG*SSEKGS
Trigger: GCTTCCTTTTTCACTTGACCACCCTTGCTCATTGGT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATGGTTTAGCCATTCCTTaGTTTGACCCTGTCGCAGAG +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYGLAIP*FDPVAE
Trigger: CTCTGCGACAGGGTCAAACCAAGGAATGGCTAAACC...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTACAATAACCCCACAGTaGGAGTTTGAGAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLTITPQ*EFEKRS
Trigger: GCTTCTTTTCTCAAACTCCCACTGTGGGGTTATTGT...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp TTGGAGTGTTTTCTCAATTGGAGGAGAGCTAGGAGATaGTCCTATCTATTCCCAACCTTCACTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LECFLNWRRARR*SYLFPTFTPSS
Trigger: GGAGGAGGGAGTGAAGGTTGGGAATAGATAGGACAATCTCCTAGCTCTCCTCCAATTGAGAAAACACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCCTTGTCTGAGGTATTaGGGTATTCCTCGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKPCLRY*GIPRGL
Trigger: TAACCCTCGAGGAATACCTCAATACCTCAGACAAGG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR TCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATAGTTTCAAGGAGGAGTaGTGGATTCCCAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYSFKEE*WIPNAP
Trigger: AGGAGCATTGGGAATCCATCACTCCTCCTTGAAACT...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTCCACTGTCAAGGTCTaGTCAAAGCTCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSTVKV*SKLFLP
Trigger: TGGCAAGAAGAGCTTTGAGCAGACCTTGACAGTGGA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGCCATGGCTTCATACTTaGTTTTCCCTGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMPWLHT*FSLTQE
Trigger: TTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGG...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCCATGGCTTCATACTTaGTTTTCCCTGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRPWLHT*FSLTQE
Trigger: TTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTCTGGGCTGCCAGTATTaGAGTTACAGTAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCILGCQY*SYSKPF
Trigger: GAAGGGTTTACTGTAACTGCAATACTGGCAGCCCAG...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTCTGGAAGAAGCAGATaGTCCAAGCCAATGCTAACA +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVSGRSR*SKPMLT
Trigger: TGTTAGCATTGGCTTGGAGCATCTGCTTCTTCCAGA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTTCAACATTAGCAGCTaGCTCTGGAAGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVFNISS*LWKKQM
Trigger: CATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGGGAGCTCATGTCGCTaGAGAGATTTTGAATGTACA +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFGSSCR*RDFECT
Trigger: TGTACATTCAAAATCTCTCCAGCGACATGAGCTCCC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGGGAGCTCATGTCGCTaGAGAGATTTTGAATGTACA +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVGSSCR*RDFECT
Trigger: TGTACATTCAAAATCTCTCCAGCGACATGAGCTCCC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCGAGTGTTTTCTCAATTaGAGGAGAGCTAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPECFLN*RRARRL
Trigger: CAATCTCCTAGCTCTCCTCCAATTGAGAAAACACTC...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGGATGCAGGTATCTTATaGGTGCTTTTTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTDAGIL*VLFDSK
Trigger: CTTTGAGTCAAAAAGCACCCATAAGATACCTGCATC...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTGAACCTACTGCTGGTTaGTTCTTGCAGAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLEPTAG*FLQRTL
Trigger: GAGGGTTCTCTGCAAGAACCAACCAGCAGTAGGTTC...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTCCTTTGGCCACTAGATaGCGACCGCATGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLPLATR*RPHVDK
Trigger: CTTATCAACATGCGGTCGCCATCTAGTGGCCAAAGG...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGACTTACCAGAGCACTaGTTTCAGGATTCTTATAGC +
Preference number: 4 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFDLPEH*FQDSYS
Trigger: GCTATAAGAATCCTGAAATCAGTGCTCTGGTAAGTC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCACTCGTTTTTCTaGATAGACCTTGGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRVHSFF*IDLGVA
Trigger: GGCAACTCCAAGGTCTATTCAGAAAAACGAGTGAAC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTTCTCCTGAGTACATATaGCACTCCATGCTGCAAGAT +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCISPEYI*HSMLQD
Trigger: ATCTTGCAGCATGGAGTGTCATATGTACTCAGGAGA...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCTGGCTTACAGTTAAGTaGCTTACTCTACAAACTCAT +
Preference number: 4 (lower is better)
Translates to: KTKAALNICSAINASCCPWLTVK*LTLQTH
Trigger: ATGAGTTTGTAGAGTAAGTCACTTAACTGTAAGCCA...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGCTCAAAGCTCTTCTTaGCAAAAGTTGGGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRAQSSS*QKLGRF
Trigger: AAAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTAGGCTCAGTCACTGCTaGTATACCATTAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVRLSHC*YTIKET
Trigger: TGTTTCTTTAATGGTATAGCAGCAGTGACTGAGCCT...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGGAGAGGTCAAGTTCTaGAAAGTCAGCATAGAGTTG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKGEVKF*KVSIEL
Trigger: CAACTCTATGCTGACTTTCCAGAACTTGACCTCTCC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CCA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCACCGAGTCAAAGTCGCTaGCATCCAGCTGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: NVETCLISSFHRKGNWSPPSQSR*HPAGRG
Trigger: ACCTCTCCCAGCTGGATGCCAGCGACTTTGACTCGG...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGACTATGCTTGATGTCTaGTTTGAAGGGATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRTMLDV*FEGILL
Trigger: GAGGAGGATCCCTTCAAACCAGACATCAAGCATAGT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTCTCAAAGCAGCTTTTTaGTTGAGGGGGCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLLKAAF*LRGQVV
Trigger: CACAACTTGCCCCCTCAACCAAAAAGCTGCTTTGAG...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTTCAGAACTTGAGTACTaGGTCTTTGCAGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLSELEY*VFAAQS
Trigger: GCTCTGAGCTGCAAAGACCCAGTACTCAAGTTCTGA...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTTATTTGCCTTCCATCTaGGTAGCTGGTGGAGACAAC +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLYLPSI*VAGGDN
Trigger: GTTGTCTCCACCAGCTACCCAGATGGAAGGCAAATA...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTCAAATGGGATTAACTaGACTCTATACCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSNGIN*TLYLGW
Trigger: CCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCATGAGCTATGTATTTaGCATCTTGGGCTAGACACT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRHELCI*HLGLDT
Trigger: AGTGTCTAGCCCAAGATGGCAAATACATAGCTCATG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTCAGGTATCTTATGGGTaGTTTTTGACTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIQVSYG*FLTQSS
Trigger: GCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTG...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATACATATGACACTCCATaGTGCAAGATTTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYTYDTP*CKISRQ
Trigger: CTGCCTTGAAATCTTGCAGCATGGAGTGTCATATGT...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTATCAATGCCTCCTGTTaGCCCATATGTTTTACAATC +
Preference number: 4 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVINASC*PICFTI
Trigger: GATTGTAAAACATATGGGGCAACAGGAGGCATTGAT...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCTTACAAAGACCGGATaGTTGAAGAATCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLTKTG*LKNLPL
Trigger: TAGTGGCAGATTCTTCAACCATCCGGTCTTTGTAAG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGAGCTGGAAATGGCTTTaGCATCACTTAAGAACACAA +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSWKWL*HHLRTQ
Trigger: TTGTGTTCTTAAGTGATGTCAAAGCCATTTCCAGCT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCAAGTTGCACCATCGCCTaGATGTCTTCCTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: NVETCLISSFHRKGNWSPSCTIA*MSSWET
Trigger: GGTTTCCCAGGAAGACATGCAGGCGATGGTGCAACT...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTCTTTGCCTAGACTATaGTTGATGTCTGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMSLPRL*LMSGLK
Trigger: CTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTCTTTGCCTAGACTATaGTTGATGTCTGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSLPRL*LMSGLK
Trigger: CTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR GCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTCTTTGCCTAGACTATaGTTGATGTCTGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSLPRL*LMSGLK
Trigger: CTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCTAAGAGATCATATATaGACCAACTCCTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLRDHI*TNSFQH
Trigger: GTGCTGAAAGGAGTTGGTCCATATATGATCTCTTAG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGCTACAGCAAGCTTTATaGCGATCACATGTAAACATC +
Preference number: 4 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMLQQAL*RSHVNI
Trigger: GATGTTTACATGTGATCGCCATAAAGCTTGCTGTAG...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp AACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATaGGAGTCCAGAGAGGTCAACTGCTGTGACACACAA +
Preference number: 4 (lower is better)
Translates to: NMSNQFISQERK*ESREVNCCDTQ
Trigger: TTGTGTGTCACAGCAGTTGACCTCTCTGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp AGTAAAAGGGACTTACCAAAGTTACAAAGGAAATTCTaGGTAGAATCTGGACTCCCCCAACTCTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: SKRDLPKLQRKF*VESGLPQLSRL
Trigger: AAGTCTGGAGAGTTGGGGGAGTCCAGATTCTACCAAGAATTTCCTTTGTAACTTTGGTAAGTCCCTTTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp TCTCTAGGCTGTGTGGTCACACCAAGAGAAAATAATTaGAGTCCAAGATTTGGAAATGCTGGAAAGGACCAT +
Preference number: 4 (lower is better)
Translates to: SLGCVVTPRENN*SPRFGNAGKDH
Trigger: ATGGTCCTTTCCAGCATTTCCAAATCTTGGACTCAAATTATTTTCTCTTGGTGTGACCACACAGCCTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
3UTR CAA 72 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATaGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAAT +
Preference number: 4 (lower is better)
Translates to: KRKHIGRALSEV*RYSSRVKAVIN
Trigger: ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR TCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTCAGGCACAGTACATCTaGGCCATAAATACATTATTT +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIQAQYI*AINTLF
Trigger: AAATAATGTATTTATGGCTCAGATGTACTGTGCCTG...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCAAGGACACAGTGGGATTaGACCTACTGCTGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: NVETCLISSFHRKGNWSPRTQWD*TYCWLV
Trigger: AACCAACCAGCAGTAGGTTCAATCCCACTGTGTCCT...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR TCA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGAAGACAAGGTTAATGTaGGATTTGACATCGTTACCT +
Preference number: 4 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKKTRLM*DLTSLP
Trigger: AGGTAACGATGTCAAATCTCACATTAACCTTGTCTT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR GCA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTAGAAGGTTTCCTCCTTaGCTCTTACGGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: DFKADAGILWVLFDSKQLRRFPP*LLRIKY
Trigger: ATACTTTATCCGTAAGAGGCAAGGAGGAAACCTTCT...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTAAAGCAAAGCCCAATTaGAGTGTTTTCTCAATTGGA +
Preference number: 4 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIKAKPN*SVFSIG
Trigger: TCCAATTGAGAAAACACTCCAATTGGGCTTTGCTTT...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CCA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCATGGGAAGTCCCTTTTTaGTCCATCTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: NVETCLISSFHRKGNWSPWEVPF*SIFLSP
Trigger: AGGGCTTAGGAAGATGGACCAAAAAGGGACTTCCCA...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS TCA 90 bp CAGCCGCAGTGGGCGCAGGCTTGGTCTGGGCCCGGTGCTCTTGGGTaGAGCTGCGATCCTTACCTCCTCCACCGAGGACGGGCGACCAGG +
Preference number: 5 (lower is better)
Translates to: QPQWAQAWSGPGALG*SCDPYLLHRGRATR
Trigger: CCTGGTCGCCCGTCCTCGGTGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp CCTCCAGCCGCAGTGGGCGCAGGCTTGGTCTGGGCCCGGTGCTCTTaGGTGAAGCTGCGATCCTTACCTCCTCCACCGAGGACGGGCGAC +
Preference number: 5 (lower is better)
Translates to: PPAAVGAGLVWARCS*VKLRSLPPPPRTGD
Trigger: GTCGCCCGTCCTCGGTGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp GGGGTCCCCGTAGGAGCTGCTGGTCTTGGCCACTGTCCTCGTCCGTaGGGCTGCCCAGCTCCCGCTCTACGTCGTAGGCCTTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GVPVGAAGLGHCPRP*GCPAPALRRRPWEP
Trigger: TGGCTCCCAAGGCCTACGACGTAGAGCGGGAGCTGGGCAGCCCCACGGACGAGGACAGTGGCCAAGACCAGCAGCTCCTACGGGGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp CGGCTCCTTGTCCTCCTTGGCAGGGAGCCGGGGACTCTGGAGGCATaGTGGCTGCAGACCCCGATCCTGCAGGCAGCACTGTGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: RLLVLLGREPGTLEA*WLQTPILQAALCRG
Trigger: ACCTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGTCCCCGGCTCCCTGCCAAGGAGGACAAGGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS GCA 90 bp TTGTCCTCCTTGGCAGGGAGCCGGGGACTCTGGAGGCATGGTGGCTaGAGACCCCGATCCTGCAGGCAGCACTGTGCCGAGGTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LSSLAGSRGLWRHGG*RPRSCRQHCAEVRC
Trigger: GCACCTCACCTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGTCCCCGGCTCCCTGCCAAGGAGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CCA 90 bp CTCCTTGTCCTCCTTGGCAGGGAGCCGGGGACTCTGGAGGCATGGTaGCTGCAGACCCCGATCCTGCAGGCAGCACTGTGCCGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LLVLLGREPGTLEAW*LQTPILQAALCRGE
Trigger: CTCACCTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGTCCCCGGCTCCCTGCCAAGGAGGACAAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CCA 90 bp TCCTCACCCGGCTCCTTGTCCTCCTTGGCAGGGAGCCGGGGACTCTaGAGGCATGGTGGCTGCAGACCCCGATCCTGCAGGCAGCACTGT +
Preference number: 5 (lower is better)
Translates to: SSPGSLSSLAGSRGL*RHGGCRPRSCRQHC
Trigger: ACAGTGCTGCCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGTCCCCGGCTCCCTGCCAAGGAGGACAAGGAGCCGGGTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS TCA 90 bp GGGCACCGTGGAGTGGCTGCAGCCCAAGGCCTTGGGGAGCTGGGATaGGCGCTGGACTGTGGGCACTGCCTGCCATCCGTAGTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: GHRGVAAAQGLGELG*ALDCGHCLPSVVSV
Trigger: TACACTGACTACGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAGCCACTCCACGGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434684.1
CDS GCA 90 bp TTTTCACCTCCAGCCGCAGTGGGCGCAGGCTTGGTCTGGGCCCGGTaGTCTTGGGTGAAGCTGCGATCCTTACCTCCTCCACCGAGGACG +
Preference number: 5 (lower is better)
Translates to: FSPPAAVGAGLVWAR*SWVKLRSLPPPPRT
Trigger: CGTCCTCGGTGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGTGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 90 bp ACCACGCGGCCTTCCCCAATGGCCTTTTCCCGCCGCTTCCTGGCGTaGCGGATGCTTGGCGTTCTGTCTGAACACGGCCCTCTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: TTRPSPMAFSRRFLA*RMLGVLSEHGPLLS
Trigger: TGAGAGCAGAGGGCCGTGTTCAGACAGAACGCCAAGCATCCGGCACGCCAGGAAGCGGCGGGAAAAGGCCATTGGGGAAGGCCGCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 90 bp AGAAGTGCCGGAGCCCTCCGTAGCTCAGCTGGAAGGAGGGCTCGTTaGGCTTCCTCAGGGCAGCGCCCTTTGTCAAAGAGAGGGCCGCGT +
Preference number: 5 (lower is better)
Translates to: RSAGALRSSAGRRAR*ASSGQRPLSKRGPR
Trigger: ACGCGGCCCTCTCTTTGACAAAGGGCGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCCAGCTGAGCTACGGAGGGCTCCGGCACTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
ENST00000492495.1
CDS CCA 90 bp GGACCTCCCTTTTCACCTCCAGCCGCAGTGGGCGCAGGCTTGGTCTaGGCCCGGTGCTCTTGGGTGAAGCTGCGATCCTTACCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: GPPFSPPAAVGAGLV*ARCSWVKLRSLPPP
Trigger: TGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGTGAAAAGGGAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp CTGGGCTGTGGCATGTCGCAGGTGGGACAGGAGCTCACTTCGCTCTaGGTGCTTCTTTGGCAGCTTGTGGGCAGCCCCTGGGGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LGCGMSQVGQELTSL*VLLWQLVGSPWGGL
Trigger: AAGGCCACCCCAGGGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCTCCTGTCCCACCTGCGACATGCCACAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp GCTGGCACGGATCTCATGGTCTCTCAGCAGCGTGCTGTCCTTGGGTaGGGCGCCAGCATCACAGCTTCTGTCTTCCTCCCTGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: AGTDLMVSQQRAVLG*GASITASVFLPARG
Trigger: GCCCCTGGCAGGGAGGAAGACAGAAGCTGTGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACCATGAGATCCGTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp GGCTGCAGCCCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTaGGCACTGCCTGCCATCCGTAGTCAGTGTATCTGGGCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: GCSPRPWGAGMSAGL*ALPAIRSQCIWASR
Trigger: TCTGCTGGCCCAGATACACTGACTACGGATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434684.1
CDS-3UTR CAA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGGCCCCTGGGGTGGCCTaGAGTGAGAGGCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWAPGVA*SERPSG
Trigger: CCCTGAGGGCCTCTCACTCAAGGCCACCCCAGGGGC...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGGTGAAGAGCCAGAGCTaGAGCGGCTGCGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKVKSQS*SGCGNR
Trigger: TCTGTTCCCGCAGCCGCTCAAGCTCTGGCTCTTCAC...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS GCA 90 bp GCTGTGGCATGTCGCAGGTGGGACAGGAGCTCACTTCGCTCTGGGTaGTTCTTTGGCAGCTTGTGGGCAGCCCCTGGGGTGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: AVACRRWDRSSLRSG*FFGSLWAAPGVALS
Trigger: ACTCAAGGCCACCCCAGGGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCTCCTGTCCCACCTGCGACATGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp TCCAAAGGAACAGGAGAAGGGACGCTTCTGGCCAGCCTGGGAGGCTaGCTGGGCTGTGGCATGTCGCAGGTGGGACAGGAGCTCACTTCG +
Preference number: 5 (lower is better)
Translates to: SKGTGEGTLLASLGG*LGCGMSQVGQELTS
Trigger: CGAAGTGAGCTCCTGTCCCACCTGCGACATGCCACAGCCCAGCCAGCCTCCCAGGCTGGCCAGAAGCGTCCCTTCTCCTGTTCCTTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp GTGAAGAGCCAGAGCTTGAGCGGCTGCGGGAACAGAGCTGCCGGTTaGCCTTGCTTGGTGGGCTCTGGTAGGGGCAGTGGTCAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: VKSQSLSGCGNRAAG*PCLVGSGRGSGQSK
Trigger: CTTGCTCTGACCACTGCCCCTACCAGAGCCCACCAAGCAAGGCCAACCGGCAGCTCTGTTCCCGCAGCCGCTCAAGCTCTGGCTCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp AGCGCTGGACTGTGGGCACTGCCTGCCATCCGTAGTCAGTGTATCTaGGCCAGCAGAAGTGCCGGAGCCCTCCGTAGCTCAGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SAGLWALPAIRSQCI*ASRSAGALRSSAGR
Trigger: CCTTCCAGCTGAGCTACGGAGGGCTCCGGCACTTCTGCTGGCCCAGATACACTGACTACGGATGGCAGGCAGTGCCCACAGTCCAGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434684.1
CDS-3UTR CAA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGCTGTCTCTTCCGGCCTaGTCCATGGGCTGGGAGTAT +
Preference number: 5 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKLSLPA*SMGWEY
Trigger: ATACTCCCAGCCCATGGACAAGGCCGGAAGAGACAG...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS CCA 90 bp GTCTCCAGCAGCCCAAAGTGTTTGGTGAGGCTGGCACGGATCTCATaGTCTCTCAGCAGCGTGCTGTCCTTGGGTGGGGCGCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: VSSSPKCLVRLARIS*SLSSVLSLGGAPAS
Trigger: TGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACCATGAGATCCGTGCCAGCCTCACCAAACACTTTGGGCTGCTGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGTGTCAGAGCTTGATGTaGGGTAGGATGTGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKCQSLM*GRMWPG
Trigger: TCCTGGCCACATCCTACCCAACATCAAGCTCTGACA...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CAGGGCTTGGCAGATACGGCCCGGAAACGGCAGGCCGCGCTTTCCTGCAGACCATCTGGGTGTCAGAGCTaGATGTTGGGTAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: QGLADTARKRQAALSCRPSGCQS*MLGRMW
Trigger: CCACATCCTACCCAACATCAAGCTCTGACACCCAGA...TGGTCTGCAGGAAAGCGCGGCCTGCCGTTTCCGGGCCGTATCTGCCAAGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACAGCAGTGGGCGCAGGCTaGGTCTGGGCCCGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTAVGAG*VWARCS
Trigger: AGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGC...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAGCCCCTGGGGTGGCCTaGAGTGAGAGGCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGAPGVA*SERPSG
Trigger: CCCTGAGGGCCTCTCACTCAAGGCCACCCCAGGGGC...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp CGATGGGTGACGGACCCGGCACTTCGAGGTGCACCCGGGACAACCCGTTGGAAGCTCCCACGTCAGAACTaGAGTACTGGGTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: RWVTDPALRGAPGTTRWKLPRQN*STGSLQ
Trigger: CTGCAAAGACCCAGTACTCAAGTTCTGACGTGGGAG...CTTCCAACGGGTTGTCCCGGGTGCACCTCGAAGTGCCGGGTCCGTCACCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTCTGCAGCCCAAGGCCTaGGGGAGCTGGGATGAGCGC +
Preference number: 5 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSLQPKA*GSWDER
Trigger: GCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAG...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS CCA 90 bp CTGCTCTCACATCTGAAGTTCCTTCGAGTGGCTGGTGACCAGGAGTaGCAGGGTGAAGAGCCAGAGCTTGAGCGGCTGCGGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LLSHLKFLRVAGDQE*QGEEPELERLREQS
Trigger: GCTCTGTTCCCGCAGCCGCTCAAGCTCTGGCTCTTCACCCTGCCACTCCTGGTCACCAGCCACTCGAAGGAACTTCAGATGTGAGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp CTAGACTGTGGCTGGGTTTCAGGGGCTTACCGTAGTCAGTGTATCTaGGCCAGCAGAAGTGCCGGAGCCCTCCGTAGCTCAGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LDCGWVSGAYRSQCI*ASRSAGALRSSAGR
Trigger: CCTTCCAGCTGAGCTACGGAGGGCTCCGGCACTTCTGCTGGCCCAGATACACTGACTACGGTAAGCCCCTGAAACCCAGCCACAGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp GCTGGACTGTGGGCACTGCCTGCCATCCTGCTGGGACATCTTGGCCATGGTATCAAAGTCAGCATAGAGTaGCTCCTCCCCGGACCCTCC +
Preference number: 5 (lower is better)
Translates to: AGLWALPAILLGHLGHGIKVSIE*LLPGPS
Trigger: GGAGGGTCCGGGGAGGAGCAACTCTATGCTGACTTT...GATACCATGGCCAAGATGTCCCAGCAGGATGGCAGGCAGTGCCCACAGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGAGGGTTGCTGCAGGCCTaGGGGAGTGGCTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGGLLQA*GSGSGV
Trigger: GACCCCTGAGCCACTCCCCAAGGCCTGCAGCAACCC...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp GCCTTGTCCATGGGCTGGGAGTATGCTCACCACTCAGTGGAAGATCATGGGCTCGCTCTGGGTGCTTCTTaGGCAGCTTGTGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: ALSMGWEYAHHSVEDHGLALGAS*AACGQP
Trigger: GGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGC...GAGCCCATGATCTTCCACTGAGTGGTGAGCATACTCCCAGCCCATGGACAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGTGGCGTGCCGGATGCTaGGCGTTCTGTCTGAACACG +
Preference number: 5 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWWRAGC*AFCLNT
Trigger: CGTGTTCAGACAGAACGCCAAGCATCCGGCACGCCA...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGCAGTCATTTCGCCTCTaGAGGAGCTGCCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWQSFRL*RSCQPP
Trigger: GGGAGGCTGGCAGCTCCTCAAGAGGCGAAATGACTG...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS GCA 90 bp CCTCCTCCTCCTCCCCTTCTTCCTCTTCCTCCTCTGGGAGGAAGCTaGTCTCGCCGCTGCTGCTGCTGCTGTCTTCAAAGACAGTGTCAT +
Preference number: 5 (lower is better)
Translates to: PPPPPLLPLPPLGGS*SRRCCCCCLQRQCH
Trigger: ATGACACTGTCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCTTCCTCCCAGAGGAGGAAGAGGAAGAAGGGGAGGAGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp CAGTCTCTGAGTTCTCTGGGCACCACTGCAGCTCCCCAAAGCAGGTaGCCGAGTCAAAGTCGCTGGCATCCAGCTGGGAGAGGTCAAGTT +
Preference number: 5 (lower is better)
Translates to: QSLSSLGTTAAPQSR*PSQSRWHPAGRGQV
Trigger: AACTTGACCTCTCCCAGCTGGATGCCAGCGACTTTGACTCGGCCACCTGCTTTGGGGAGCTGCAGTGGTGCCCAGAGAACTCAGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CCA 90 bp CTTGATGTCTGGTTTGAAGGGATCCTCCTCTGTGGGCTTGTACGGTaGTGTGGTGGGTGGGGTGAGTCCTGCTGTGCCACAGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LDVWFEGILLCGLVR*CGGWGESCCATELH
Trigger: GTGGAGCTCTGTGGCACAGCAGGACTCACCCCACCCACCACACCACCGTACAAGCCCACAGAGGAGGATCCCTTCAAACCAGACATCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp AGACGGCTCCCAGGACCTCAGCACCTTCCTTTGCAGGACGCCTTCTaGTCGGAGCACCTGGCAGTAGTCATGGTCTCCAAAGGAACAGGA +
Preference number: 5 (lower is better)
Translates to: RRLPGPQHLPLQDAF*SEHLAVVMVSKGTG
Trigger: TCCTGTTCCTTTGGAGACCATGACTACTGCCAGGTGCTCCGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAGGTCCTGGGAGCCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp TTCATCGTCCTCCTCCTCCTCCTCCCCTTCTTCCTCTTCCTCCTCTaGGAGGAAGCTGCTCTCGCCGCTGCTGCTGCTGCTGTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: FIVLLLLLPFFLFLL*EEAALAAAAAAVFK
Trigger: TTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCTTCCTCCCAGAGGAGGAAGAGGAAGAAGGGGAGGAGGAGGAGGAGGACGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAGGCTCCTTGTCCTCCTaGGCAGGGAGCCGGGGACTC +
Preference number: 5 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVGSLSS*AGSRGL
Trigger: GAGTCCCCGGCTCCCTGCCAAGGAGGACAAGGAGCC...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp ATCTTCCTAGAGGCCGTGGGAGGCTGGATTCTCTTTGGTAGCAGTCACAGGACATCCTCACCCGGCTCCTaGTCCTCCTTGGCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: IFLEAVGGWILFGSSHRTSSPGS*SSLAGS
Trigger: GCTCCCTGCCAAGGAGGACAAGGAGCCGGGTGAGGA...TGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTCCCACGGCCTCTAGGAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTGCCGGTTGGCCTTGCTaGGTGGGCTCTGGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPAGWPC*VGSGRG
Trigger: GCCCCTACCAGAGCCCACCAAGCAAGGCCAACCGGC...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGCGAGGGGGTGGGTGTGAATTCCAGAGCAGACTGCACTAAGCTGGACTTCTGGCTCTTTGAGGAGTTGTaGCACAGCCCAGGGACCGAC +
Preference number: 5 (lower is better)
Translates to: GEGVGVNSRADCTKLDFWLFEEL*HSPGTD
Trigger: GTCGGTCCCTGGGCTGTGCAACAACTCCTCAAAGAG...CCAGAAGTCCAGCTTAGTGCAGTCTGCTCTGGAATTCACACCCACCCCCTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGGGCTCCTTGTCCTCCTaGGCAGGGAGCCGGGGACTC +
Preference number: 5 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTGSLSS*AGSRGL
Trigger: GAGTCCCCGGCTCCCTGCCAAGGAGGACAAGGAGCC...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGCAGTGGGCGCAGGCTaGGTCTGGGCCCGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAAVGAG*VWARCS
Trigger: AGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGCAGTGGGCGCAGGCTaGGTCTGGGCCCGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVAVGAG*VWARCS
Trigger: AGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGCCCCTGGGGTGGCCTaGAGTGAGAGGCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAAPGVA*SERPSG
Trigger: CCCTGAGGGCCTCTCACTCAAGGCCACCCCAGGGGC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTAGCAGCGTGCTGTCCTaGGGTGGGGCGCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPSSVLS*GGAPAS
Trigger: TGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCT...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCGCCGGTTGGCCTTGCTaGGTGGGCTCTGGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIAGWPC*VGSGRG
Trigger: GCCCCTACCAGAGCCCACCAAGCAAGGCCAACCGGC...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTATGGAAGGAGGGCTCGTaGCGCTTCCTCAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVWKEGS*RFLRAA
Trigger: CGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCCA...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCTGCAGCCCAAGGCCTaGGGGAGCTGGGATGAGCGC +
Preference number: 5 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCLQPKA*GSWDER
Trigger: GCGCTCATCCCAGCTCCCCAAGGCCTTGGGCTGCAG...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS TCA 90 bp ATGGTGGCTGCAGACCCCGATCCTGCAGGCAGCACTGTGCCGAGGTaGGGTGCTTATGTAGTTCTGTACAACTTCGGCTCTGAGACTGCA +
Preference number: 5 (lower is better)
Translates to: MVAADPDPAGSTVPR*GAYVVLYNFGSETA
Trigger: TGCAGTCTCAGAGCCGAAGTTGTACAGAACTACATAAGCACCTCACCTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGCAGCCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CCA 90 bp CACTGTCAATCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTGGTTaGGTTCAGTCTCTGAGTTCTCTGGGCACCACTGCAGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: HCQSGRARSHRGCTG*VQSLSSLGTTAAPQ
Trigger: TTGGGGAGCTGCAGTGGTGCCCAGAGAACTCAGAGACTGAACCCAACCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGATTGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCAGGGAGCCTTCTTGTCTaGGGTGCTGTCCGCCTTAAC +
Preference number: 5 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPGSLLV*GAVRLN
Trigger: GTTAAGGCGGACAGCACCCAAGACAAGAAGGCTCCC...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGGGTTGCTGCAGGCCTaGGGGAGTGGCTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVGLLQA*GSGSGV
Trigger: GACCCCTGAGCCACTCCCCAAGGCCTGCAGCAACCC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGCAGTGGGCGCAGGCTaGGTCTGGGCCCGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVAVGAG*VWARCS
Trigger: AGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTAGCAGCGTGCTGTCCTaGGGTGGGGCGCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCSSVLS*GGAPAS
Trigger: TGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCT...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp GACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGGGGTGAAGAGGCACGCCTCTCCTATTTCTaGTCAGCACCTCGCACTCCT +
Preference number: 5 (lower is better)
Translates to: DAGRASSELESGHGGEEARLSYF*SAPRTP
Trigger: AGGAGTGCGAGGTGCTGACAAGAAATAGGAGAGGCG...TGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTCAGGGCAGCGCCCTTaGTCAAAGAGAGGGCCGCGT +
Preference number: 5 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSSGQRP*SKRGPR
Trigger: ACGCGGCCCTCTCTTTGACAAAGGGCGCTGCCCTGA...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGTGGAAGGAGGGCTCGTaGCGCTTCCTCAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTWKEGS*RFLRAA
Trigger: CGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCCA...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCGGACCCTCCACCCATaGCTCTGGTGGCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVRTLHP*LWWRLL
Trigger: GAGGAGCCGCCACCAGAGCAATGGGTGGAGGGTCCG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403750.5
CDS TCA 90 bp CAGCCAGACCCACGTCATCTTCAGGGATGTCATCCAGGGTCTTGGTaGGCTCTGCCAGGAGGGCCTCATTCTCACTGTCAATCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: QPDPRHLQGCHPGSW*ALPGGPHSHCQSGR
Trigger: TCTTCCAGATTGACAGTGAGAATGAGGCCCTCCTGGCAGAGCTCACCAAGACCCTGGATGACATCCCTGAAGATGACGTGGGTCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CCA 90 bp TTCTCACTGTCAATCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTaGTTGGGTTCAGTCTCTGAGTTCTCTGGGCACCACTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FSLSIWKSSESSGLY*LGSVSEFSGHHCSS
Trigger: GGAGCTGCAGTGGTGCCCAGAGAACTCAGAGACTGAACCCAACCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGATTGACAGTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGGCTCCTTGTCCTCCTaGGCAGGGAGCCGGGGACTC +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVGSLSS*AGSRGL
Trigger: GAGTCCCCGGCTCCCTGCCAAGGAGGACAAGGAGCC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTCCTCACCCGGCTCCTaGTCCTCCTTGGCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKASSPGS*SSLAGS
Trigger: GCTCCCTGCCAAGGAGGACAAGGAGCCGGGTGAGGA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTGGGCCCGGTGCTCTaGGGTGAAGCTGCGATCCTT +
Preference number: 5 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTLGPVL*GEAAIL
Trigger: AAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAG...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCCTGGGCCCGGTGCTCTaGGGTGAAGCTGCGATCCTT +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVILGPVL*GEAAIL
Trigger: AAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAG...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGTCCTCCTCTGTGGGCTaGTACGGTGGTGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMSSSVG*YGGVVG
Trigger: ACCCACCACACCACCGTACAAGCCCACAGAGGAGGA...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCTGCTTCTTTGGCAGCTaGTGGGCAGCCCCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVICFFGS*WAAPGV
Trigger: CACCCCAGGGGCTGCCCACAAGCTGCCAAAGAAGCA...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTACCTCAGCACCTTCCTTaGCAGGACGCCTTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVPQHLP*QDAFWS
Trigger: CGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAGG...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTAGCAGCGTGCTGTCCTaGGGTGGGGCGCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKASSVLS*GGAPAS
Trigger: TGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATAGCAGCCCAAAGTGTTaGGTGAGGCTGGCACGGATC +
Preference number: 5 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADSSPKC*VRLARI
Trigger: GATCCGTGCCAGCCTCACCAAACACTTTGGGCTGCT...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTGAACAGAGCTGCCGGTaGGCCTTGCTTGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLEQSCR*ALLGGL
Trigger: GAGCCCACCAAGCAAGGCCAACCGGCAGCTCTGTTC...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp TCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCGTGAAGAGCCAGAGCTaGAGCGGCTGCGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: SRVKAVINAGSAGPLSVSVKSQS*SGCGNR
Trigger: TCTGTTCCCGCAGCCGCTCAAGCTCTGGCTCTTCAC...GCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGTGGAAGGAGGGCTCGTaGCGCTTCCTCAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGWKEGS*RFLRAA
Trigger: CGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCCA...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATGAGACAAGGCAGGGCTaGGCAGATACGGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: LAENPHPEQELGQVREWNETRQG*ADTARK
Trigger: TTTCCGGGCCGTATCTGCCAAGCCCTGCCTTGTCTC...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GACATTTTTGGAAAACACCAGCACGGCACAGAAACGGACAGTACGACCTGCCCTCCCCTCTTTGAGGAGTaGTTGCACAGCCCAGGGACC +
Preference number: 5 (lower is better)
Translates to: DIFGKHQHGTETDSTTCPPLFEE*LHSPGT
Trigger: GGTCCCTGGGCTGTGCAACAACTCCTCAAAGAGGGG...AGGGCAGGTCGTACTGTCCGTTTCTGTGCCGTGCTGGTGTTTTCCAAAAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCCAGGTGGCTGCTGCCTaGTCTGGGGTCACCACGGAA +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIQVAAA*SGVTTE
Trigger: TTCCGTGGTGACCCCAGACAAGGCAGCAGCCACCTG...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS TCA 90 bp TGTGCCGAGGTGAGGTGCTTATGTAGTTCTGTACAACTTCGGCTCTaGGACTGCATCATGGGAGCCTTCTTGTCTTGGGTGCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: CAEVRCLCSSVQLRL*DCIMGAFLSWVLSA
Trigger: GGCGGACAGCACCCAAGACAAGAAGGCTCCCATGATGCAGTCTCAGAGCCGAAGTTGTACAGAACTACATAAGCACCTCACCTCGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS GCA 90 bp GGTGGGGTGAGTCCTGCTGTGCCACAGAGCTCCACTGTCAAGGTCTaGTCAAAGCTCTTCTTGCCAAAAGTTGGGTCGCTTTGTGACAAG +
Preference number: 5 (lower is better)
Translates to: GGVSPAVPQSSTVKV*SKLFLPKVGSLCDK
Trigger: CTTGTCACAAAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGCAGACCTTGACAGTGGAGCTCTGTGGCACAGCAGGACTCACCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp CAAACACTTCAAAGCGCCTCTTCAGCTCTCGGGAGCTCATGTCGCTaGAGAGATTTTGAATGTACACCACGCGGCCTTCCCCAATGGCCT +
Preference number: 5 (lower is better)
Translates to: QTLQSASSALGSSCR*RDFECTPRGLPQWP
Trigger: AGGCCATTGGGGAAGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGACATGAGCTCCCGAGAGCTGAAGAGGCGCTTTGAAGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTGGGTTGCTGCAGGCCTaGGGGAGTGGCTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIGLLQA*GSGSGV
Trigger: GACCCCTGAGCCACTCCCCAAGGCCTGCAGCAACCC...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTCCTCAGCACCTTCCTTaGCAGGACGCCTTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLPQHLP*QDAFWS
Trigger: CGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAGG...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGAGCAGCCCAAAGTGTTaGGTGAGGCTGGCACGGATC +
Preference number: 5 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMSSPKC*VRLARI
Trigger: GATCCGTGCCAGCCTCACCAAACACTTTGGGCTGCT...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCCGGTTGGCCTTGCTaGGTGGGCTCTGGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKAGWPC*VGSGRG
Trigger: GCCCCTACCAGAGCCCACCAAGCAAGGCCAACCGGC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGAACAGAGCTGCCGGTaGGCCTTGCTTGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVEQSCR*ALLGGL
Trigger: GAGCCCACCAAGCAAGGCCAACCGGCAGCTCTGTTC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp TATGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCGCCTCTCCTATTTCTaGTCAGCACCTCGCACTCCT +
Preference number: 5 (lower is better)
Translates to: YGPTPFSTPGCQGVKGTYRLSYF*SAPRTP
Trigger: AGGAGTGCGAGGTGCTGACAAGAAATAGGAGAGGCG...GTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGTCAGGGCAGCGCCCTTaGTCAAAGAGAGGGCCGCGT +
Preference number: 5 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGSGQRP*SKRGPR
Trigger: ACGCGGCCCTCTCTTTGACAAAGGGCGCTGCCCTGA...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTCAGGGCAGCGCCCTTaGTCAAAGAGAGGGCCGCGT +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVSGQRP*SKRGPR
Trigger: ACGCGGCCCTCTCTTTGACAAAGGGCGCTGCCCTGA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTGGAAGGAGGGCTCGTaGCGCTTCCTCAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVWKEGS*RFLRAA
Trigger: CGCTGCCCTGAGGAAGCGCAACGAGCCCTCCTTCCA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATACTGCTGGTTGGTTCTaGCAGAGAACCCTCACCCTG +
Preference number: 5 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADTAGWF*QRTLTL
Trigger: CAGGGTGAGGGTTCTCTGCAAGAACCAACCAGCAGT...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCATTGTCCACGCTCCCCTaGAGATTTCCCACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPLSTLP*RFPTCF
Trigger: GAAACAGGTGGGAAATCTCAAGGGGAGCGTGGACAA...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATGCTGCACATACCACCTaGTCCACGCTCCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: LAENPHPEQELGQVREWNAAHTT*STLPLR
Trigger: TCTCAAGGGGAGCGTGGACAAGGTGGTATGTGCAGC...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CCAAGGCCTTGGGGAGCTGGGATGAGCGCTGGACTGTGGGCACTGCCTGCCATCGTACATTGTACTTCTTaGTCCTTCTTCATCATCTTG +
Preference number: 5 (lower is better)
Translates to: PRPWGAGMSAGLWALPAIVHCTS*SFFIIL
Trigger: CAAGATGATGAAGAAGGACAAAGAAGTACAATGTAC...GATGGCAGGCAGTGCCCACAGTCCAGCGCTCATCCCAGCTCCCCAAGGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS GCA 90 bp CCCTCAGGGGAGGGGAGGCTGAGAGCTATTTCTTTGCCTAGACTATaGTTGATGTCTGGTTTGAAGGGATCCTCCTCTGTGGGCTTGTAC +
Preference number: 5 (lower is better)
Translates to: PSGEGRLRAISLPRL*LMSGLKGSSSVGLY
Trigger: GTACAAGCCCACAGAGGAGGATCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGAAATAGCTCTCAGCCTCCCCTCCCCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 90 bp GGTGCTTATGTAGTTCTGTACAACTTCGGCTCTGAGACTGCATCATaGGAGCCTTCTTGTCTTGGGTGCTGTCCGCCAGTGAGAGCTCGT +
Preference number: 5 (lower is better)
Translates to: GAYVVLYNFGSETAS*EPSCLGCCPPVRAR
Trigger: ACGAGCTCTCACTGGCGGACAGCACCCAAGACAAGAAGGCTCCCATGATGCAGTCTCAGAGCCGAAGTTGTACAGAACTACATAAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360453.8
ENST00000403750.5
CDS-3UTR CAA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGATCATGGGAGCCTTCTaGTCTTGGGTGCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWIMGAF*SWVLSA
Trigger: GGCGGACAGCACCCAAGACAAGAAGGCTCCCATGAT...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCTGGGCCCGGTGCTCTaGGGTGAAGCTGCGATCCTT +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVLGPVL*GEAAIL
Trigger: AAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTCCTCCTCTGTGGGCTaGTACGGTGGTGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVSSSVG*YGGVVG
Trigger: ACCCACCACACCACCGTACAAGCCCACAGAGGAGGA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTGCTTCTTTGGCAGCTaGTGGGCAGCCCCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVCFFGS*WAAPGV
Trigger: CACCCCAGGGGCTGCCCACAAGCTGCCAAAGAAGCA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGCTCTGGGTGCTTCTTaGGCAGCTTGTGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RALSEVLRYSSRVKAVINALGAS*AACGQP
Trigger: GGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGCTCTGGGTGCTTCTTaGGCAGCTTGTGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVALGAS*AACGQP
Trigger: GGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCCTCAGCACCTTCCTTaGCAGGACGCCTTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVPQHLP*QDAFWS
Trigger: CGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAGG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGAGCAGCGTGCTGTCCTaGGGTGGGGCGCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSSVLS*GGAPAS
Trigger: TGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTTCATACTCAGGGCTCTaGCAGGAGGCCAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCSYSGL*QEARSS
Trigger: GGAAGACCTGGCCTCCTGCAAGAGCCCTGAGTATGA...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp AAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAAAATGAACAGAGCTGCCGGTaGGCCTTGCTTGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: KAVINAGSAGPLSVSCQNEQSCR*ALLGGL
Trigger: GAGCCCACCAAGCAAGGCCAACCGGCAGCTCTGTTC...ATTTTGACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTGAAGAGCCAGAGCTaGAGCGGCTGCGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAVKSQS*SGCGNR
Trigger: TCTGTTCCCGCAGCCGCTCAAGCTCTGGCTCTTCAC...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AGGACAGAGCTACAACGAGATGGTTGCCAATGGCAGCTGCTCCCTCTGGGTTACGCCTTGGAGACTCCTTaGACCAAAAATACAGCCCAG +
Preference number: 5 (lower is better)
Translates to: RTELQRDGCQWQLLPLGYALETP*TKNTAQ
Trigger: CTGGGCTGTATTTTTGGTCAAAGGAGTCTCCAAGGC...GTAACCCAGAGGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGCTCTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGGGGTGAAGAGGCAACTGCTTCCCAAGCTTaGAGTCTTACTAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: DAGRASSELESGHGGEEATASQA*SLTRLW
Trigger: CCACAGTCTAGTAAGACTCAAAGCTTGGGAAGCAGT...TGCCTCTTCACCCCCATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCTGCAGCTCCAACCTCTaGGGTTCAGGTGATCCTCCC +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVICSSNL*GSGDPP
Trigger: GGGAGGATCACCTGAACCCAAGAGGTTGGAGCTGCA...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCGGGGGTTTCACCATGTaGGCCACGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIGGFTM*ATMVSI
Trigger: GATCGAGACCATCGTGGCCAACATGGTGAAACCCCC...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS TCA 90 bp AGGGAGCAAGGAGAGTATGTTATTGGGCTGGCTGGGTGGACACTGTaGGACCACCCATTACTAGATGAGGAACCGACTGCCACAGTGATT +
Preference number: 5 (lower is better)
Translates to: REQGEYVIGLAGWTL*DHPLLDEEPTATVI
Trigger: AATCACTGTGGCAGTCGGTTCCTCATCTAGTAATGGGTGGTCTCACAGTGTCCACCCAGCCAGCCCAATAACATACTCTCCTTGCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492495.1
CDS CCA 90 bp CAGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTaGGGATGGAAGCTATGTCCACAAGGCGCTTTAGCTCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: QAKWLQSYTKQHTGV*GWKLCPQGALALGF
Trigger: AAAACCCAGAGCTAAAGCGCCTTGTGGACATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AAAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCAAAGTCAGCATAGAGTaGCTCCTCCCCGGACCCTCC +
Preference number: 5 (lower is better)
Translates to: KNKSCPKHMQRDQCLLLPKVSIE*LLPGPS
Trigger: GGAGGGTCCGGGGAGGAGCAACTCTATGCTGACTTT...GGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCACTTAACACAAGGCCGTaGACTTTTAGATCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPLNTRP*TFRSEA
Trigger: GGCCTCAGATCTAAAAGTCAACGGCCTTGTGTTAAG...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTATCATGGGAGCCTTCTaGTCTTGGGTGCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAIMGAF*SWVLSA
Trigger: GGCGGACAGCACCCAAGACAAGAAGGCTCCCATGAT...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCATCACAGAGCACGTCTaGAGCCAGAAGTTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCITEHV*SQKFPQ
Trigger: CTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGAT...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCTGGGCCCGGTGCTCTaGGGTGAAGCTGCGATCCTT +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLGPVL*GEAAIL
Trigger: AAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGCTCTGGGTGCTTCTTaGGCAGCTTGTGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRALGAS*AACGQP
Trigger: GGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGC...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTCATACTCAGGGCTCTaGCAGGAGGCCAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKASYSGL*QEARSS
Trigger: GGAAGACCTGGCCTCCTGCAAGAGCCCTGAGTATGA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGTGAAGAGCCAGAGCTaGAGCGGCTGCGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: RALSEVLRYSSRVKAVINVKSQS*SGCGNR
Trigger: TCTGTTCCCGCAGCCGCTCAAGCTCTGGCTCTTCAC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTGGCGTGCCGGATGCTaGGCGTTCTGTCTGAACACG +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVWRAGC*AFCLNT
Trigger: CGTGTTCAGACAGAACGCCAAGCATCCGGCACGCCA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGGTCGCTGGAGAGATTTaGAATGTACACCACGCGGCC +
Preference number: 5 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTVAGEI*NVHHAA
Trigger: GGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGAC...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCGTCGCTGGAGAGATTTaGAATGTACACCACGCGGCC +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIVAGEI*NVHHAA
Trigger: GGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGAC...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCCGCCTCTCCTATTTCTaGTCAGCACCTCGCACTCCT +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIRLSYF*SAPRTP
Trigger: AGGAGTGCGAGGTGCTGACAAGAAATAGGAGAGGCG...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATTCAGGGCAGCGCCCTTaGTCAAAGAGAGGGCCGCGT +
Preference number: 5 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYSGQRP*SKRGPR
Trigger: ACGCGGCCCTCTCTTTGACAAAGGGCGCTGCCCTGA...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGGCAAAGTGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATGGATCCATGGCTTCATACTaGCTTTTCCCTGACGCAGGA +
Preference number: 5 (lower is better)
Translates to: RQSGCKVIPSSTLGCGDGSMASY*LFPDAG
Trigger: TCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGA...TCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCACTTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGTGGGAAGTCCCTTTTaGGTCCATCTTCCTAAGCCC +
Preference number: 5 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCVGSPF*VHLPKP
Trigger: GGGCTTAGGAAGATGGACCAAAAAGGGACTTCCCAC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATCCCAAGGCTGACCCTTaGACCAAGAGCAATCAAGGA +
Preference number: 5 (lower is better)
Translates to: LAENPHPEQELGQVREWNPKADP*TKSNQG
Trigger: TCCTTGATTGCTCTTGGTCAAAGGGTCAGCCTTGGG...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CAGTGTGTCCACAGGCACAGACAAACCGCAGGACCACTCAGGATCAAAGCTGATGGGTTACTCCTCAATTaGGTGGGAAAGAGACCAAGG +
Preference number: 5 (lower is better)
Translates to: QCVHRHRQTAGPLRIKADGLLLN*VGKRPR
Trigger: CCTTGGTCTCTTTCCCACCAAATTGAGGAGTAACCC...ATCAGCTTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGACACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATGATTCTGATTCAGCCTaGTACAGACTGAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHDSDSA*YRLRKE
Trigger: CTCCTTCCTCAGTCTGTACAAGGCTGAATCAGAATC...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CACGGGACCAAGAACCAGAAGGCCTGGTCTGGGTCACCGCTCTGCCTCCTCACTAGTGTATTGCTAGTATaGTCTGAGAACAAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: HGTKNQKAWSGSPLCLLTSVLLV*SENKRE
Trigger: TTCTCTCTTGTTCTCAGACAATACTAGCAATACACT...AGTGAGGAGGCAGAGCGGTGACCCAGACCAGGCCTTCTGGTTCTTGGTCCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACATTTAGAAACCTGGGGTaGGGGAGAGGGCTCGTGTTG +
Preference number: 5 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTFRNLG*GRGLVL
Trigger: CAACACGAGCCCTCTCCCCAACCCCAGGTTTCTAAA...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGGAGGCTGGATTCTCTTaGGTAGCAGTCACAGGACAG +
Preference number: 5 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMEAGFS*VAVTGQ
Trigger: CTGTCCTGTGACTGCTACCAAAGAGAATCCAGCCTC...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTCAGTGTCTCAGGGCCTaGGCTGTCCTATCTAGAGAC +
Preference number: 5 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCQCLRA*AVLSRD
Trigger: GTCTCTAGATAGGACAGCCAAGGCCCTGAGACACTG...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTTCTGGGTGTCAGAGCTaGATGTTGGGTAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCSGCQS*MLGRMW
Trigger: CCACATCCTACCCAACATCAAGCTCTGACACCCAGA...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATGGGAGCCTTCTTGTCTaGGGTGCTGTCCGCCTTAAC +
Preference number: 5 (lower is better)
Translates to: RALSEVLRYSSRVKAVINGSLLV*GAVRLN
Trigger: GTTAAGGCGGACAGCACCCAAGACAAGAAGGCTCCC...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTATCATGGGAGCCTTCTaGTCTTGGGTGCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVIMGAF*SWVLSA
Trigger: GGCGGACAGCACCCAAGACAAGAAGGCTCCCATGAT...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp TCTACTTCCCCCAACAGCTTCTCGTCCATTAGTAACCTGCTGCAGTGCCACATAATCACAGAGCACGTCTaGAGCCAGAAGTTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: STSPNSFSSISNLLQCHIITEHV*SQKFPQ
Trigger: CTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGAT...TATGTGGCACTGCAGCAGGTTACTAATGGACGAGAAGCTGTTGGGGGAAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTATCACAGAGCACGTCTaGAGCCAGAAGTTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCITEHV*SQKFPQ
Trigger: CTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGAT...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTCCTCCTCTGTGGGCTaGTACGGTGGTGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSSSVG*YGGVVG
Trigger: ACCCACCACACCACCGTACAAGCCCACAGAGGAGGA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp TCCTCGAGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTATGCTTGATGTCTGGTTaGAAGGGATCCTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SSRVKAVINAGSAGPLSVCLMSG*KGSSSV
Trigger: CACAGAGGAGGATCCCTTCAAACCAGACATCAAGCA...TACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCTCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp GCTGGGACATCTTGGCCATGGTATCAGTGTCTCAGGGCCTTGGCTGTCCTATCTTTGCCTAGACTATGCTaGATGTCTGGTTTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: AGTSWPWYQCLRALAVLSLPRLC*MSGLKG
Trigger: TCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAA...AGATAGGACAGCCAAGGCCCTGAGACACTGATACCATGGCCAAGATGTCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCCTCAGCACCTTCCTTaGCAGGACGCCTTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKPQHLP*QDAFWS
Trigger: CGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAGG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTGGCGTGCCGGATGCTaGGCGTTCTGTCTGAACACG +
Preference number: 5 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRWRAGC*AFCLNT
Trigger: CGTGTTCAGACAGAACGCCAAGCATCCGGCACGCCA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp GTAAGCTGTCAAAATCCATGGCTTCATACTTGCTTTTCCCTGACGCAGGAAGGGGTCGCTGGAGAGATTTaGAATGTACACCACGCGGCC +
Preference number: 5 (lower is better)
Translates to: VSCQNPWLHTCFSLTQEGVAGEI*NVHHAA
Trigger: GGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGAC...CCCTTCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGATTTTGACAGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGTCGCTGGAGAGATTTaGAATGTACACCACGCGGCC +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVVAGEI*NVHHAA
Trigger: GGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGAC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATATGCAAAGTCAGCCTTaGCCTACTTCCTGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: LAENPHPEQELGQVREWNMQSQP*PTSWVS
Trigger: AGACACCCAGGAAGTAGGCAAAGGCTGACTTTGCAT...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACACAGGACACAGTGGGATaGAACCTACTGCTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTQDTVG*NLLLVG
Trigger: ACCAACCAGCAGTAGGTTCAATCCCACTGTGTCCTG...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATTATATAAACCCCTCTTaGAGGAGTTGTTGCACAGCC +
Preference number: 5 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHYINPS*RSCCTA
Trigger: GGCTGTGCAACAACTCCTCAAAGAGGGGTTTATATA...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTGGTGGAGACAACCTTaGGCCACTAGATGGCGACCG +
Preference number: 5 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFWWRQP*ATRWRP
Trigger: CGGTCGCCATCTAGTGGCCAAAGGTTGTCTCCACCA...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGGGGAGAGGGCTCGTGTaGGTTTCAACATTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTGRGLV*VSTLAA
Trigger: AGCTGCTAATGTTGAAACCAACACGAGCCCTCTCCC...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGGACCACCTTGCCCAGTaGATTAAGGCTGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: AQMGLTELYTWDGPWTELDHLAQ*IKAGYR
Trigger: TCTGTAGCCAGCCTTAATCAACTGGGCAAGGTGGTC...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGAAAGTCAGCATAGAGTaGCTCCTCCCCGGACCCTCC +
Preference number: 5 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRKVSIE*LLPGPS
Trigger: GGAGGGTCCGGGGAGGAGCAACTCTATGCTGACTTT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTTGTCAGAGCTTGATGTaGGGTAGGATGTGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKACQSLM*GRMWPG
Trigger: TCCTGGCCACATCCTACCCAACATCAAGCTCTGACA...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCATGTAGCGTATGAGTaGCACCATCGCCTGCATGTC +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVHVAYE*HHRLHV
Trigger: GACATGCAGGCGATGGTGCAACTCATACGCTACATG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTTCCTCCTCTGTGGGCTaGTACGGTGGTGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: DFKADAGILWVLFDSKQLSSSVG*YGGVVG
Trigger: ACCCACCACACCACCGTACAAGCCCACAGAGGAGGA...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGAGCAGCCCAAAGTGTTaGGTGAGGCTGGCACGGATC +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSSPKC*VRLARI
Trigger: GATCCGTGCCAGCCTCACCAAACACTTTGGGCTGCT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGAGCAGCCCAAAGTGTTaGGTGAGGCTGGCACGGATC +
Preference number: 5 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRSSPKC*VRLARI
Trigger: GATCCGTGCCAGCCTCACCAAACACTTTGGGCTGCT...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTCATACTCAGGGCTCTaGCAGGAGGCCAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMSYSGL*QEARSS
Trigger: GGAAGACCTGGCCTCCTGCAAGAGCCCTGAGTATGA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCGCCTTGTCTGAGGTATaGAGGTATTCCTCGAGGGTT +
Preference number: 5 (lower is better)
Translates to: GRALSEVLRYSSRVKAVIALSEV*RYSSRV
Trigger: AACCCTCGAGGAATACCTCAATACCTCAGACAAGGC...GATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp GTTATGTCTGTATTGGTCAAGGAGGTGGGAGTAGTGGCACATGAGCTATGTATTGCTACAACGAGATGGTaGCCAATGGCAGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: VMSVLVKEVGVVAHELCIATTRW*PMAAAP
Trigger: GGGAGCAGCTGCCATTGGCAACCATCTCGTTGTAGC...AATACATAGCTCATGTGCCACTACTCCCACCTCCTTGACCAATACAGACATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCAAAGCAGCTTTTTGGTaGAGGGGGCAAGTTGTGACG +
Preference number: 5 (lower is better)
Translates to: KTKAALNICSAINASCCPKAAFW*RGQVVT
Trigger: CGTCACAACTTGCCCCCTCAACCAAAAAGCTGCTTT...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACATTGAGTACTGGGTCTTaGCAGCTCAGAGCATTCCTC +
Preference number: 5 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTLSTGS*QLRAFL
Trigger: GAGGAATGCTCTGAGCTGCAAAGACCCAGTACTCAA...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGGGGAGCTGGTCTTCTaGGATAAGGCAACTCAGCCA +
Preference number: 5 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFGELVF*DKATQP
Trigger: TGGCTGAGTTGCCTTATCCAAGAAGACCAGCTCCCC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CCCTGTGCGGGCGGCTATCGACACAGTCTACAGCAAGCTTTATGGCGATCACATAAGAAGGTTTCCTCCTaGCCTCTTACGGATAAAGTA +
Preference number: 5 (lower is better)
Translates to: PCAGGYRHSLQQALWRSHKKVSS*PLTDKV
Trigger: TACTTTATCCGTAAGAGGCAAGGAGGAAACCTTCTT...ATGTGATCGCCATAAAGCTTGCTGTAGACTGTGTCGATAGCCGCCCGCACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTATCAATCATGTAGCGTATGAGTaGCACCATCGCCTGCATGTC +
Preference number: 5 (lower is better)
Translates to: RALSEVLRYSSRVKAVINHVAYE*HHRLHV
Trigger: GACATGCAGGCGATGGTGCAACTCATACGCTACATG...ATTGATAACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACATCTTCTTGCCAAAAGTaGGGTCGCTTTGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTSSCQK*GRFVTR
Trigger: CCTTGTCACAAAGCGACCCAACTTTTGGCAAGAAGA...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTTCTTCTTGCCAAAAGTaGGGTCGCTTTGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCSSCQK*GRFVTR
Trigger: CCTTGTCACAAAGCGACCCAACTTTTGGCAAGAAGA...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGTTATCAATGCAGGCTCTGCTGGGCCTCTTTCAGTAAGCTGTTGCTCAAAGCTCTTCTaGCCAAAAGTTGGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: RVKAVINAGSAGPLSVSCCSKLF*PKVGSL
Trigger: AAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGCA...ACAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTGATAACAGCCTTAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394320.7
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTGCTTGATGTCTGGTTaGAAGGGATCCTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVCLMSG*KGSSSV
Trigger: CACAGAGGAGGATCCCTTCAAACCAGACATCAAGCA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGCGCCTCTCCTATTTCTaGTCAGCACCTCGCACTCCT +
Preference number: 5 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRRLSYF*SAPRTP
Trigger: AGGAGTGCGAGGTGCTGACAAGAAATAGGAGAGGCG...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTCCATGGCTTCATACTaGCTTTTCCCTGACGCAGGA +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVSMASY*LFPDAG
Trigger: TCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGCCTTGTCTGAGGTATaGAGGTATTCCTCGAGGGTT +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVALSEV*RYSSRV
Trigger: AACCCTCGAGGAATACCTCAATACCTCAGACAAGGC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ACTTGCTTTTCCCTGACGCAGGAAGGGCCTCTTCTGAATTGGAATCTGGGCATGCATATTGGAAGGGCCTaGTCTGAGGTATTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: TCFSLTQEGPLLNWNLGMHIGRA*SEVLRY
Trigger: ATACCTCAATACCTCAGACAAGGCCCTTCCAATATG...CATGCCCAGATTCCAATTCAGAAGAGGCCCTTCCTGCGTCAGGGAAAAGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTGGATAGACACACACTaGGAGCATGAGCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFWIDTH*EHELGT
Trigger: TGTGCCCAGCTCATGCTCCAAGTGTGTGTCTATCCA...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CATTTGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGAGGAGAGCTAGGAGATaGTCCTATCTATTCCCAACC +
Preference number: 5 (lower is better)
Translates to: HLEIQAVYSPAAHTTLSTRRARR*SYLFPT
Trigger: GGTTGGGAATAGATAGGACAATCTCCTAGCTCTCCT...CGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGGGGCTCCTATAATTTGAGCCAAACTTGCTCAGTAAGAGACAAGGCAGGGCTTTCACAGGAAAGGAAATaGGAGTCCAGAGAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: GGSYNLSQTCSVRDKAGLSQERK*ESREVN
Trigger: GTTGACCTCTCTGGACTCCAATTTCCTTTCCTGTGA...AAGCCCTGCCTTGTCTCTTACTGAGCAAGTTTGGCTCAAATTATAGGAGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCGGACAGACTGGTCCTTaGCTAAAACTCTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCGQTGP*LKLSIS
Trigger: AGAAATGGAGAGTTTTAGCAAAGGACCAGTCTGTCC...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCTTGGATCAGACATTTTaGGAAAACACCAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCLDQTF*ENTSTA
Trigger: TGCCGTGCTGGTGTTTTCCAAAAATGTCTGATCCAA...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AGAGGGCTCGTGTTGGTTTCAACATTAGCAGCTGCCTCTGGAAGAAGCAGATGCCCCAAATTTGGGCAGTaGGATTTTTGTACTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RGLVLVSTLAAASGRSRCPKFGQ*DFCTPS
Trigger: GGAAGGAGTACAAAAATCCAACTGCCCAAATTTGGG...GCATCTGCTTCTTCCAGAGGCAGCTGCTAATGTTGAAACCAACACGAGCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp TGGAAATCCAAGCAGTCTATTCCCCTGCTGCACATACCACCTTGTCCACGCTCCTTCCCCAGAAACCATTaGGAAATCCAAGCAGTCTAT +
Preference number: 5 (lower is better)
Translates to: WKSKQSIPLLHIPPCPRSFPRNH*EIQAVY
Trigger: ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAA...GGAGCGTGGACAAGGTGGTATGTGCAGCAGGGGAATAGACTGCTTGGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCCCCACAGTGGGAGTTaGAGAAAAGAAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAPHSGS*RKEASS
Trigger: AGAACTGGCTTCTTTTCTCAAACTCCCACTGTGGGG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCCTGGCACGTCTAAGTaGGAAACCTTCACTTCTCTG +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAPGTSK*ETFTSL
Trigger: CAGAGAAGTGAAGGTTTCCAACTTAGACGTGCCAGG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403750.5
CDS-3UTR CAA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCATCCTCACCCGGCTCCTaGTCCTCCTTGGCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: NVETCLISSFHRKGNWSPSSPGS*SSLAGS
Trigger: GCTCCCTGCCAAGGAGGACAAGGAGCCGGGTGAGGA...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCATGTAGCGTATGAGTaGCACCATCGCCTGCATGTC +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKHVAYE*HHRLHV
Trigger: GACATGCAGGCGATGGTGCAACTCATACGCTACATG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGATCACAGAGCACGTCTaGAGCCAGAAGTTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKITEHV*SQKFPQ
Trigger: CTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGAT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AGCGAGGACACTAATGTGGCAGTGGAACGTCAACACCATGGAAACTCACAGACATTGCCTAGACTATGCTaGATGTCTGGTTTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: SEDTNVAVERQHHGNSQTLPRLC*MSGLKG
Trigger: TCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAA...TGTCTGTGAGTTTCCATGGTGTTGACGTTCCACTGCCACATTAGTGTCCTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp TCTACTTCCCCCAACAGCTTCTCGTCCATTAGTAACCTGCTGCAGTGCCACATAGAAAACGTAAACATATaGGAAGGGCCTTGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: STSPNSFSSISNLLQCHIENVNI*EGPCLR
Trigger: CCTCAGACAAGGCCCTTCCAATATGTTTACGTTTTC...TATGTGGCACTGCAGCAGGTTACTAATGGACGAGAAGCTGTTGGGGGAAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS-3UTR CAA 90 bp TGGACCAACTCCTTTCAGCACACCGGGGTGCCAGGGAGTAAAAGGGACTTACCACAGACAGAAGCAGCTTaGTTCAATGTAAACATTGAT +
Preference number: 5 (lower is better)
Translates to: WTNSFQHTGVPGSKRDLPQTEAA*FNVNID
Trigger: ATCAATGTTTACATTGAACAAAGCTGCTTCTGTCTG...TGGTAAGTCCCTTTTACTCCCTGGCACCCCGGTGTGCTGAAAGGAGTTGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTTCTTCTTGCCAAAAGTaGGGTCGCTTTGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVSSCQK*GRFVTR
Trigger: CCTTGTCACAAAGCGACCCAACTTTTGGCAAGAAGA...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTGCTCAAAGCTCTTCTaGCCAAAAGTTGGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFCSKLF*PKVGSL
Trigger: AAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGCA...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTGCTTGATGTCTGGTTaGAAGGGATCCTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKCLMSG*KGSSSV
Trigger: CACAGAGGAGGATCCCTTCAAACCAGACATCAAGCA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTTTGCCTAGACTATGCTaGATGTCTGGTTTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVLPRLC*MSGLKG
Trigger: TCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAA...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTCCATGGCTTCATACTaGCTTTTCCCTGACGCAGGA +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKSMASY*LFPDAG
Trigger: TCCTGCGTCAGGGAAAAGCAAGTATGAAGCCATGGA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATGCCTTGTCTGAGGTATaGAGGTATTCCTCGAGGGTT +
Preference number: 5 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYALSEV*RYSSRV
Trigger: AACCCTCGAGGAATACCTCAATACCTCAGACAAGGC...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTCATATTGGAAGGGCCTaGTCTGAGGTATTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: HIGRALSEVLRYSSRVKAHIGRA*SEVLRY
Trigger: ATACCTCAATACCTCAGACAAGGCCCTTCCAATATG...AGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTGAAAACGTAAACATATaGGAAGGGCCTTGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVENVNI*EGPCLR
Trigger: CCTCAGACAAGGCCCTTCCAATATGTTTACGTTTTC...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAAACAAAAGCTGCCCTAAACATATGCAGCGCGATCAATGCCTCCTGTTGCCCCAGCCAGCATATGGTTTaGTGTGATTGTTGGAAACCT +
Preference number: 5 (lower is better)
Translates to: KTKAALNICSAINASCCPSQHMV*CDCWKP
Trigger: AGGTTTCCAACAATCACACAAAACCATATGCTGGCT...GGGGCAACAGGAGGCATTGATCGCGCTGCATATGTTTAGGGCAGCTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GACACTCCATGCTGCAAGATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTGGCGTCAAAATAGTATaGGGAGTGTTACGCCATGGA +
Preference number: 5 (lower is better)
Translates to: DTPCCKISRQMQVSYGCFGVKIV*GVLRHG
Trigger: TCCATGGCGTAACACTCCCAATACTATTTTGACGCC...AAAGCACCCATAAGATACCTGCATCTGCCTTGAAATCTTGCAGCATGGAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAGTTCACGATGGACAGCAGGGTGGCCGAAAGGATTTATTTGCCTTCCATCTGGGATCAATGCCTCCTGTaGCCCCATATGTTTTACAAT +
Preference number: 5 (lower is better)
Translates to: KFTMDSRVAERIYLPSIWDQCLL*PHMFYN
Trigger: ATTGTAAAACATATGGGGCAACAGGAGGCATTGATC...CCAGATGGAAGGCAAATAAATCCTTTCGGCCACCCTGCTGTCCATCGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGTGGGCAGTTGGATTTTaGTACTCCTTCCGGATGTGC +
Preference number: 5 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMWAVGF*YSFRMC
Trigger: GCACATCCGGAAGGAGTACAAAAATCCAACTGCCCA...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp CTTGCAGAGAACCCTCACCCTGAACAGGAGCTGGGTCAAGTCAGAGAATGGAATCAGGCCGTAGTTACCTaGTTAAGCTTCCTAATAAAT +
Preference number: 5 (lower is better)
Translates to: LAENPHPEQELGQVREWNQAVVT*LSFLIN
Trigger: ATTTATTAGGAAGCTTAACAAGGTAACTACGGCCTG...ATTCCATTCTCTGACTTGACCCAGCTCCTGTTCAGGGTGAGGGTTCTCTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCTTAACACAAGGCCGTaGACTTTTAGATCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLNTRP*TFRSEA
Trigger: GGCCTCAGATCTAAAAGTCAACGGCCTTGTGTTAAG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS-3UTR CAA 90 bp AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGTGCTCAAAGCTCTTCTaGCCAAAAGTTGGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: KRKHIGRALSEVLRYSSRCSKLF*PKVGSL
Trigger: AAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGCA...CCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTGCTCAAAGCTCTTCTaGCCAAAAGTTGGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKCSKLF*PKVGSL
Trigger: AAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGCA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGCTGTTCTGAGAGCTATTTCTTaGCCTAGACTATGCTTGATG +
Preference number: 5 (lower is better)
Translates to: IGRALSEVLRYSSRVKAVLRAIS*PRLCLM
Trigger: CATCAAGCATAGTCTAGGCAAAGAAATAGCTCTCAG...AACAGCCTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCATATTGGAAGGGCCTaGTCTGAGGTATTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVHIGRA*SEVLRY
Trigger: ATACCTCAATACCTCAGACAAGGCCCTTCCAATATG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTGAAAACGTAAACATATaGGAAGGGCCTTGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVENVNI*EGPCLR
Trigger: CCTCAGACAAGGCCCTTCCAATATGTTTACGTTTTC...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp GCTCAAATGGGATTAACTGAACTCTATACCTGGGATGGGCCATGGACTGAGCTGAAGCTGGAAATGGCTTaGACATCACTTAAGAACACA +
Preference number: 5 (lower is better)
Translates to: AQMGLTELYTWDGPWTELKLEMA*TSLKNT
Trigger: TGTGTTCTTAAGTGATGTCAAAGCCATTTCCAGCTT...CAGCTCAGTCCATGGCCCATCCCAGGTATAGAGTTCAGTTAATCCCATTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGGCCGAAAGGATTTATTaGCCTTCCATCTGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMAERIY*PSIWVA
Trigger: AGCTACCCAGATGGAAGGCAAATAAATCCTTTCGGC...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GACTTCTGGATGGTCATCTTCCCCAGAAACCATTTGGAAATCCAAGCAGTCTATTCCCACCTGTTTCCATaGGAATCAGAACATCCCTCA +
Preference number: 5 (lower is better)
Translates to: DFWMVIFPRNHLEIQAVYSHLFP*ESEHPS
Trigger: TGAGGGATGTTCTGATTCCAATGGAAACAGGTGGGA...ATAGACTGCTTGGATTTCCAAATGGTTTCTGGGGAAGATGACCATCCAGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS CCA 90 bp AAAACACCAAACAGTCATCACAGGCCTTTGGGGACAGTTAATCAATaGCTTTATCCCACCATTTGTGAAAGTCTCTCAGGTCTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: KTPNSHHRPLGTVNQ*LYPTICESLSGLVS
Trigger: AGAGACGAGACCTGAGAGACTTTCACAAATGGTGGGATAAAGCCATTGATTAACTGTCCCCAAAGGCCTGTGATGACTGTTTGGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461780.1
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGTTGCCTAGACTATGCTaGATGTCTGGTTTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKLPRLC*MSGLKG
Trigger: TCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAA...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp CGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTCTGAGAGCTATTTCTTaGCCTAGACTATGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RKHIGRALSEVLRYSSRVLRAIS*PRLCLM
Trigger: CATCAAGCATAGTCTAGGCAAAGAAATAGCTCTCAG...AACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGCATATTGGAAGGGCCTaGTCTGAGGTATTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKHIGRA*SEVLRY
Trigger: ATACCTCAATACCTCAGACAAGGCCCTTCCAATATG...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGGAAAACGTAAACATATaGGAAGGGCCTTGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKENVNI*EGPCLR
Trigger: CCTCAGACAAGGCCCTTCCAATATGTTTACGTTTTC...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS-3UTR CAA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCAACCCGGGACAACCCGTaGGAAGCGAGGACACTAATG +
Preference number: 5 (lower is better)
Translates to: NVETCLISSFHRKGNWSPTRDNP*EARTLM
Trigger: CATTAGTGTCCTCGCTTCCAACGGGTTGTCCCGGGT...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GATTTCAAGGCAGATGCAGGTATCTTATGGGTGCTTTTTGACTCAAAGCAGCTTACTTCTTATCTTGCCTaGAGGGCAGAATTCGGACCA +
Preference number: 5 (lower is better)
Translates to: DFKADAGILWVLFDSKQLTSYLA*RAEFGP
Trigger: TGGTCCGAATTCTGCCCTCAAGGCAAGATAAGAAGT...AAGCTGCTTTGAGTCAAAAAGCACCCATAAGATACCTGCATCTGCCTTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp GGTCACAACATTCGGATTAACAGCTATCCAGTGGGGACAAAGACAAGGTTAATGCTGAGAGCTATTTCTTaGCCTAGACTATGCTTGATG +
Preference number: 5 (lower is better)
Translates to: GHNIRINSYPVGTKTRLMLRAIS*PRLCLM
Trigger: CATCAAGCATAGTCTAGGCAAAGAAATAGCTCTCAG...CATTAACCTTGTCTTTGTCCCCACTGGATAGCTGTTAATCCGAATGTTGTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCACAGGGTCCCTCTTCTTaGGCCAGGGAAACCATGACA +
Preference number: 5 (lower is better)
Translates to: NVETCLISSFHRKGNWSPQGPSS*ARETMT
Trigger: TGTCATGGTTTCCCTGGCCAAAGAAGAGGGACCCTG...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAGGGTTAAGACTAGGGGACTAACTTaGACATATTGCACATGCACT +
Preference number: 5 (lower is better)
Translates to: KHIGRALSEVLRYSSRVKTRGLT*TYCTCT
Trigger: AGTGCATGTGCAATATGTCAAAGTTAGTCCCCTAGT...CTTAACCCTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCAGACACATGCCAGGGCTaGAATTCACCTGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: NVETCLISSFHRKGNWSPDTCQG*NSPDAG
Trigger: ACCAGCATCAGGTGAATTCAAGCCCTGGCATGTGTC...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS-3UTR CAA 90 bp AATGTTGAAACATGTCTAATCAGTTCATTTCACAGGAAAGGAAATTGGAGTCCATTCCAAGCCCCAAATTaGGGCAGTTGGATTTTTGTA +
Preference number: 5 (lower is better)
Translates to: NVETCLISSFHRKGNWSPFQAPN*GSWIFV
Trigger: TACAAAAATCCAACTGCCCAAATTTGGGGCTTGGAA...TGGACTCCAATTTCCTTTCCTGTGAAATGAACTGATTAGACATGTTTCAACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309241.10
CDS CCA 72 bp AGGCCGGCGGACCTCCCTTTTCACCTCCAGCCGCAGTaGGCGCAGGCTTGGTCTGGGCCCGGTGCTCTTGGG +
Preference number: 6 (lower is better)
Translates to: RPADLPFHLQPQ*AQAWSGPGALG
Trigger: CCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGTGAAAAGGGAGGTCCGCCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp TTGGAGTGGTGCCGGGACCAGGGCCGGGATCTGACCTaGTGGGAGGGGTTGCTGCAGGCCTTGGGGAGTGGC +
Preference number: 6 (lower is better)
Translates to: LEWCRDQGRDLT*WEGLLQALGSG
Trigger: GCCACTCCCCAAGGCCTGCAGCAACCCCTCCCAGCAGGTCAGATCCCGGCCCTGGTCCCGGCACCACTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CAA 90 bp ACCTCCAGCCGCAGTGGGCGCAGGCTTGGTCTGGGCCCGGTGCTCTaGGGTGAAGCTGCGATCCTTACCTCCTCCACCGAGGACGGGCGA +
Preference number: 6 (lower is better)
Translates to: TSSRSGRRLGLGPVL*GEAAILTSSTEDGR
Trigger: TCGCCCGTCCTCGGTGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp CTCCTTGGCAGGGAGCCGGGGACTCTGGAGGCATGGTaGCTGCAGACCCCGATCCTGCAGGCAGCACTGTGC +
Preference number: 6 (lower is better)
Translates to: LLGREPGTLEAW*LQTPILQAALC
Trigger: GCACAGTGCTGCCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGTCCCCGGCTCCCTGCCAAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CCA 72 bp GGCTCCTTGTCCTCCTTGGCAGGGAGCCGGGGACTCTaGAGGCATGGTGGCTGCAGACCCCGATCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: GSLSSLAGSRGL*RHGGCRPRSCR
Trigger: CCTGCAGGATCGGGGTCTGCAGCCACCATGCCTCCAGAGTCCCCGGCTCCCTGCCAAGGAGGACAAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CAA 90 bp GCCGGCGGACCTCCCTTTTCACCTCCAGCCGCAGTGGGCGCAGGCTaGGTCTGGGCCCGGTGCTCTTGGGTGAAGCTGCGATCCTTACCT +
Preference number: 6 (lower is better)
Translates to: AGGPPFSPPAAVGAG*VWARCSWVKLRSLP
Trigger: AGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGTGAAAAGGGAGGTCCGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS TCA 72 bp TGGGCGCAGGCTTGGTCTGGGCCCGGTGCTCTTGGGTaGAGCTGCGATCCTTACCTCCTCCACCGAGGACGG +
Preference number: 6 (lower is better)
Translates to: WAQAWSGPGALG*SCDPYLLHRGR
Trigger: CCGTCCTCGGTGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp CCAGCCGCAGTGGGCGCAGGCTTGGTCTGGGCCCGGTaGTCTTGGGTGAAGCTGCGATCCTTACCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PAAVGAGLVWAR*SWVKLRSLPPP
Trigger: TGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp GCAGTGGGCGCAGGCTTGGTCTGGGCCCGGTGCTCTTaGGTGAAGCTGCGATCCTTACCTCCTCCACCGAGG +
Preference number: 6 (lower is better)
Translates to: AVGAGLVWARCS*VKLRSLPPPPR
Trigger: CCTCGGTGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 72 bp CGCAGTGGGCGCAGGCTTGGTCTGGGCCCGGTGCTCTaGGGTGAAGCTGCGATCCTTACCTCCTCCACCGAG +
Preference number: 6 (lower is better)
Translates to: RSGRRLGLGPVL*GEAAILTSSTE
Trigger: CTCGGTGGAGGAGGTAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp CCAAAGGAACAGGAGAAGGGACGCTTCTGGCCAGCCTaGGAGGCTGGCTGGGCTGTGGCATGTCGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: PKEQEKGRFWPA*EAGWAVACRRW
Trigger: CCACCTGCGACATGCCACAGCCCAGCCAGCCTCCCAGGCTGGCCAGAAGCGTCCCTTCTCCTGTTCCTTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp CAGAGCTTGAGCGGCTGCGGGAACAGAGCTGCCGGTTaGCCTTGCTTGGTGGGCTCTGGTAGGGGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: QSLSGCGNRAAG*PCLVGSGRGSG
Trigger: ACCACTGCCCCTACCAGAGCCCACCAAGCAAGGCCAACCGGCAGCTCTGTTCCCGCAGCCGCTCAAGCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp TGTCGCAGGTGGGACAGGAGCTCACTTCGCTCTGGGTaGTTCTTTGGCAGCTTGTGGGCAGCCCCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: CRRWDRSSLRSG*FFGSLWAAPGV
Trigger: CACCCCAGGGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCTCCTGTCCCACCTGCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp AGGAGTGGCAGGGTGAAGAGCCAGAGCTTGAGCGGCTaGGGGAACAGAGCTGCCGGTTGGCCTTGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: RSGRVKSQSLSG*GNRAAGWPCLV
Trigger: CACCAAGCAAGGCCAACCGGCAGCTCTGTTCCCGCAGCCGCTCAAGCTCTGGCTCTTCACCCTGCCACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp CCTTCCCCAATGGCCTTTTCCCGCCGCTTCCTGGCGTaGCGGATGCTTGGCGTTCTGTCTGAACACGGCCCT +
Preference number: 6 (lower is better)
Translates to: PSPMAFSRRFLA*RMLGVLSEHGP
Trigger: AGGGCCGTGTTCAGACAGAACGCCAAGCATCCGGCACGCCAGGAAGCGGCGGGAAAAGGCCATTGGGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp AGCTCACTTCGCTCTGGGTGCTTCTTTGGCAGCTTGTaGGCAGCCCCTGGGGTGGCCTTGAGTGAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: SSLRSGCFFGSL*AAPGVALSERP
Trigger: GGGCCTCTCACTCAAGGCCACCCCAGGGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp GGCATGTCGCAGGTGGGACAGGAGCTCACTTCGCTCTaGGTGCTTCTTTGGCAGCTTGTGGGCAGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GMSQVGQELTSL*VLLWQLVGSPW
Trigger: CCAGGGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGCGAAGTGAGCTCCTGTCCCACCTGCGACATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 72 bp TGGCCTTTTCCCGCCGCTTCCTGGCGTGCCGGATGCTaGGCGTTCTGTCTGAACACGGCCCTCTGCTCTCAC +
Preference number: 6 (lower is better)
Translates to: WPFPAASWRAGC*AFCLNTALCSH
Trigger: GTGAGAGCAGAGGGCCGTGTTCAGACAGAACGCCAAGCATCCGGCACGCCAGGAAGCGGCGGGAAAAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 72 bp AGGAGGGCTCGTTGCGCTTCCTCAGGGCAGCGCCCTTaGTCAAAGAGAGGGCCGCGTGCTCAGAACACCGGT +
Preference number: 6 (lower is better)
Translates to: RRARCASSGQRP*SKRGPRAQNTG
Trigger: ACCGGTGTTCTGAGCACGCGGCCCTCTCTTTGACAAAGGGCGCTGCCCTGAGGAAGCGCAACGAGCCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
ENST00000492495.1
CDS CAA 90 bp GGCCTGCCTGGCGCCAGGCGGTCCCTTCCTTCTGGGTGTCAGAGCTaGATGTTGGGTAGGATGTGGCCAGGAGGAGCTTCTGCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: GLPGARRSLPSGCQS*MLGRMWPGGASAAV
Trigger: CACTGCTGCAGAAGCTCCTCCTGGCCACATCCTACCCAACATCAAGCTCTGACACCCAGAAGGAAGGGACCGCCTGGCGCCAGGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS CAA 90 bp GTGAGGCTGGCACGGATCTCATGGTCTCTCAGCAGCGTGCTGTCCTaGGGTGGGGCGCCAGCATCACAGCTTCTGTCTTCCTCCCTGCCA +
Preference number: 6 (lower is better)
Translates to: VRLARISWSLSSVLS*GGAPASQLLSSSLP
Trigger: TGGCAGGGAGGAAGACAGAAGCTGTGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACCATGAGATCCGTGCCAGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS TCA 72 bp CCTCCAGGGCGGTCTCCAGCAGCCCAAAGTGTTTGGTaGGGCTGGCACGGATCTCATGGTCTCTCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: PPGRSPAAQSVW*GWHGSHGLSAA
Trigger: CGCTGCTGAGAGACCATGAGATCCGTGCCAGCCTCACCAAACACTTTGGGCTGCTGGAGACCGCCCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp CAATGGCCTTTTCCCGCCGCTTCCTGGCGTGCCGGATaGTTGGCGTTCTGTCTGAACACGGCCCTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: QWPFPAASWRAG*LAFCLNTALCS
Trigger: AGAGCAGAGGGCCGTGTTCAGACAGAACGCCAAGCATCCGGCACGCCAGGAAGCGGCGGGAAAAGGCCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp TTTTCACCTCCAGCCGCAGTGGGCGCAGGCTTGGTCTaGGCCCGGTGCTCTTGGGTGAAGCTGCGATCCTTA +
Preference number: 6 (lower is better)
Translates to: FSPPAAVGAGLV*ARCSWVKLRSL
Trigger: TAAGGATCGCAGCTTCACCCAAGAGCACCGGGCCCAGACCAAGCCTGCGCCCACTGCGGCTGGAGGTGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp CTGTGGGCACTGCCTGCCATCCGTAGTCAGTGTATCTaGGCCAGCAGAAGTGCCGGAGCCCTCCGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: LWALPAIRSQCI*ASRSAGALRSS
Trigger: TGAGCTACGGAGGGCTCCGGCACTTCTGCTGGCCCAGATACACTGACTACGGATGGCAGGCAGTGCCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434684.1
CDS CAA 72 bp AACCCCAGACGGCTCCCAGGACCTCAGCACCTTCCTTaGCAGGACGCCTTCTGGTCGGAGCACCTGGCAGTA +
Preference number: 6 (lower is better)
Translates to: NPRRLPGPQHLP*QDAFWSEHLAV
Trigger: TACTGCCAGGTGCTCCGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAGGTCCTGGGAGCCGTCTGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 90 bp CCTGGCGCCAGGCGGTCCCTTCCTTCTGGGTGTCAGAGCTTGATGTaGGGTAGGATGTGGCCAGGAGGAGCTTCTGCAGCAGTGAGAGCT +
Preference number: 6 (lower is better)
Translates to: PGARRSLPSGCQSLM*GRMWPGGASAAVRA
Trigger: AGCTCTCACTGCTGCAGAAGCTCCTCCTGGCCACATCCTACCCAACATCAAGCTCTGACACCCAGAAGGAAGGGACCGCCTGGCGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS CAA 90 bp CAGCTTCCTCTGGGGGAGGCAGTAGGTGTGCATGTAGCGTATGAGTaGCACCATCGCCTGCATGTCTTCCTGGGAAACCGGGGCACCGGG +
Preference number: 6 (lower is better)
Translates to: QLPLGEAVGVHVAYE*HHRLHVFLGNRGTG
Trigger: CCCGGTGCCCCGGTTTCCCAGGAAGACATGCAGGCGATGGTGCAACTCATACGCTACATGCACACCTACTGCCTCCCCCAGAGGAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CAA 90 bp CTCAAGGTGAACCCCAGACGGCTCCCAGGACCTCAGCACCTTCCTTaGCAGGACGCCTTCTGGTCGGAGCACCTGGCAGTAGTCATGGTC +
Preference number: 6 (lower is better)
Translates to: LKVNPRRLPGPQHLP*QDAFWSEHLAVVMV
Trigger: GACCATGACTACTGCCAGGTGCTCCGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAGGTCCTGGGAGCCGTCTGGGGTTCACCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS TCA 72 bp GCGCCAGGCGGTCCCTTCCTTCTGGGTGTCAGAGCTTaGTGTTGGGTAGGATGTGGCCAGGAGGAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: APGGPFLLGVRA*CWVGCGQEELL
Trigger: CAGAAGCTCCTCCTGGCCACATCCTACCCAACATCAAGCTCTGACACCCAGAAGGAAGGGACCGCCTGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS CCA 72 bp AGCCCAAAGTGTTTGGTGAGGCTGGCACGGATCTCATaGTCTCTCAGCAGCGTGCTGTCCTTGGGTGGGGCG +
Preference number: 6 (lower is better)
Translates to: SPKCLVRLARIS*SLSSVLSLGGA
Trigger: CGCCCCACCCAAGGACAGCACGCTGCTGAGAGACCATGAGATCCGTGCCAGCCTCACCAAACACTTTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp GGCTGGGTTTCAGGGGCTTACCGTAGTCAGTGTATCTaGGCCAGCAGAAGTGCCGGAGCCCTCCGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: GWVSGAYRSQCI*ASRSAGALRSS
Trigger: TGAGCTACGGAGGGCTCCGGCACTTCTGCTGGCCCAGATACACTGACTACGGTAAGCCCCTGAAACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS CAA 72 bp TCCTCCTCCAGGGCGGTCTCCAGCAGCCCAAAGTGTTaGGTGAGGCTGGCACGGATCTCATGGTCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: SSSRAVSSSPKC*VRLARISWSLS
Trigger: GCTGAGAGACCATGAGATCCGTGCCAGCCTCACCAAACACTTTGGGCTGCTGGAGACCGCCCTGGAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 90 bp CTGCTGCTGCTGCTGTCTTCAAAGACAGTGTCATACTCAGGGCTCTaGCAGGAGGCCAGGTCTTCCTCCTCCAGGGCGGTCTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LLLLLSSKTVSYSGL*QEARSSSSRAVSSS
Trigger: GCTGCTGGAGACCGCCCTGGAGGAGGAAGACCTGGCCTCCTGCAAGAGCCCTGAGTATGACACTGTCTTTGAAGACAGCAGCAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp CCTCCTCTGGGAGGAAGCTGCTCTCGCCGCTGCTGCTaGTGCTGTCTTCAAAGACAGTGTCATACTCAGGGC +
Preference number: 6 (lower is better)
Translates to: PPLGGSCSRRCC*CCLQRQCHTQG
Trigger: GCCCTGAGTATGACACTGTCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCTTCCTCCCAGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp TGGTTTGAAGGGATCCTCCTCTGTGGGCTTGTACGGTaGTGTGGTGGGTGGGGTGAGTCCTGCTGTGCCACA +
Preference number: 6 (lower is better)
Translates to: WFEGILLCGLVR*CGGWGESCCAT
Trigger: TGTGGCACAGCAGGACTCACCCCACCCACCACACCACCGTACAAGCCCACAGAGGAGGATCCCTTCAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp GATCTCATGGTCTCTCAGCAGCGTGCTGTCCTTGGGTaGGGCGCCAGCATCACAGCTTCTGTCTTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: DLMVSQQRAVLG*GASITASVFLP
Trigger: AGGGAGGAAGACAGAAGCTGTGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACCATGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp CACGGATCTCATGGTCTCTCAGCAGCGTGCTGTCCTTaGGTGGGGCGCCAGCATCACAGCTTCTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: HGSHGLSAACCP*VGRQHHSFCLP
Trigger: AGGAAGACAGAAGCTGTGATGCTGGCGCCCCACCCAAGGACAGCACGCTGCTGAGAGACCATGAGATCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp CGCCTCTGCGGGGAGGGAGCAAGGAGAGTATGTTATTaGGCTGGCTGGGTGGACACTGTGAGACCACCCATT +
Preference number: 6 (lower is better)
Translates to: RLCGEGARRVCY*AGWVDTVRPPI
Trigger: AATGGGTGGTCTCACAGTGTCCACCCAGCCAGCCCAATAACATACTCTCCTTGCTCCCTCCCCGCAGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492495.1
CDS CAA 72 bp TCGCCTCTGCGGGGAGGGAGCAAGGAGAGTATGTTATaGGGCTGGCTGGGTGGACACTGTGAGACCACCCAT +
Preference number: 6 (lower is better)
Translates to: SPLRGGSKESML*GWLGGHCETTH
Trigger: ATGGGTGGTCTCACAGTGTCCACCCAGCCAGCCCAATAACATACTCTCCTTGCTCCCTCCCCGCAGAGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492495.1
CDS CAA 90 bp AGGCGTGGCCAGACGGTAGGGTTTGCTGACATCACAGAGCACGTCTaGAGCCAGAAGTTCCCTCAGAATGGAGAACTCAGCCCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: RRGQTVGFADITEHV*SQKFPQNGELSPGG
Trigger: GCCTCCTGGGCTGAGTTCTCCATTCTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGATGTCAGCAAACCCTACCGTCTGGCCACGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 90 bp AAAGCGCCTCTTCAGCTCTCGGGAGCTCATGTCGCTGGAGAGATTTaGAATGTACACCACGCGGCCTTCCCCAATGGCCTTTTCCCGCCG +
Preference number: 6 (lower is better)
Translates to: KAPLQLSGAHVAGEI*NVHHAAFPNGLFPP
Trigger: CGGCGGGAAAAGGCCATTGGGGAAGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGACATGAGCTCCCGAGAGCTGAAGAGGCGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp TGGTTGGGTTCAGTCTCTGAGTTCTCTGGGCACCACTaGAGCTCCCCAAAGCAGGTGGCCGAGTCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: WLGSVSEFSGHH*SSPKQVAESKS
Trigger: CGACTTTGACTCGGCCACCTGCTTTGGGGAGCTGCAGTGGTGCCCAGAGAACTCAGAGACTGAACCCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS GCA 72 bp CTTAACACAAGGCCGTTGACTTTTAGATCTGAGGCCTaGCTGGCGCCAGGCGGTCCCTTCCTTCTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: LNTRPLTFRSEA*LAPGGPFLLGV
Trigger: GACACCCAGAAGGAAGGGACCGCCTGGCGCCAGGCAGGCCTCAGATCTAAAAGTCAACGGCCTTGTGTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS GCA 72 bp CCTCTGGGAGGAAGCTGCTCTCGCCGCTGCTGCTGCTaGTGTCTTCAAAGACAGTGTCATACTCAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: PLGGSCSRRCCC*CLQRQCHTQGS
Trigger: AGAGCCCTGAGTATGACACTGTCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCTTCCTCCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp CCAGGACCTCAGCACCTTCCTTTGCAGGACGCCTTCTaGTCGGAGCACCTGGCAGTAGTCATGGTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: PGPQHLPLQDAF*SEHLAVVMVSK
Trigger: TTTGGAGACCATGACTACTGCCAGGTGCTCCGACCAGAAGGCGTCCTGCAAAGGAAGGTGCTGAGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 72 bp AGGCGGTCCCTTCCTTCTGGGTGTCAGAGCTTGATGTaGGGTAGGATGTGGCCAGGAGGAGCTTCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: RRSLPSGCQSLM*GRMWPGGASAA
Trigger: TGCTGCAGAAGCTCCTCCTGGCCACATCCTACCCAACATCAAGCTCTGACACCCAGAAGGAAGGGACCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS CAA 72 bp CTTGTCTTGGGTGCTGTCCGCCTTAACACAAGGCCGTaGACTTTTAGATCTGAGGCCTGCCTGGCGCCAGGC +
Preference number: 6 (lower is better)
Translates to: LVLGAVRLNTRP*TFRSEACLAPG
Trigger: GCCTGGCGCCAGGCAGGCCTCAGATCTAAAAGTCAACGGCCTTGTGTTAAGGCGGACAGCACCCAAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS CAA 72 bp CTGGGGGAGGCAGTAGGTGTGCATGTAGCGTATGAGTaGCACCATCGCCTGCATGTCTTCCTGGGAAACCGG +
Preference number: 6 (lower is better)
Translates to: LGEAVGVHVAYE*HHRLHVFLGNR
Trigger: CCGGTTTCCCAGGAAGACATGCAGGCGATGGTGCAACTCATACGCTACATGCACACCTACTGCCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CAA 90 bp TCACTGTCAATCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTGGTaGGGTTCAGTCTCTGAGTTCTCTGGGCACCACTGCAGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: SLSIWKSSESSGLYW*GSVSEFSGHHCSSP
Trigger: TGGGGAGCTGCAGTGGTGCCCAGAGAACTCAGAGACTGAACCCAACCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGATTGACAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CAA 90 bp AAGGCAGCCAGACCCACGTCATCTTCAGGGATGTCATCCAGGGTCTaGGTGAGCTCTGCCAGGAGGGCCTCATTCTCACTGTCAATCTGG +
Preference number: 6 (lower is better)
Translates to: KAARPTSSSGMSSRV*VSSARRASFSLSIW
Trigger: CCAGATTGACAGTGAGAATGAGGCCCTCCTGGCAGAGCTCACCAAGACCCTGGATGACATCCCTGAAGATGACGTGGGTCTGGCTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS TCA 72 bp GCAGACCCCGATCCTGCAGGCAGCACTGTGCCGAGGTaGGGTGCTTATGTAGTTCTGTACAACTTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: ADPDPAGSTVPR*GAYVVLYNFGS
Trigger: AGAGCCGAAGTTGTACAGAACTACATAAGCACCTCACCTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS GCA 72 bp CTTCCTCCTCTGGGAGGAAGCTGCTCTCGCCGCTGCTaGTGCTGCTGTCTTCAAAGACAGTGTCATACTCAG +
Preference number: 6 (lower is better)
Translates to: LPPLGGSCSRRC*CCCLQRQCHTQ
Trigger: CTGAGTATGACACTGTCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCTTCCTCCCAGAGGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS GCA 72 bp CCTCTTCCTCCTCTGGGAGGAAGCTGCTCTCGCCGCTaGTGCTGCTGCTGTCTTCAAAGACAGTGTCATACT +
Preference number: 6 (lower is better)
Translates to: PLPPLGGSCSRR*CCCCLQRQCHT
Trigger: AGTATGACACTGTCTTTGAAGACAGCAGCAGCAGCAGCGGCGAGAGCAGCTTCCTCCCAGAGGAGGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp TCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTGGTTaGGTTCAGTCTCTGAGTTCTCTGGGCACCACTGCA +
Preference number: 6 (lower is better)
Translates to: SGRARSHRGCTG*VQSLSSLGTTA
Trigger: TGCAGTGGTGCCCAGAGAACTCAGAGACTGAACCCAACCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CCA 72 bp CAAAGCGCCTCTTCAGCTCTCGGGAGCTCATGTCGCTaGAGAGATTTTGAATGTACACCACGCGGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: QSASSALGSSCR*RDFECTPRGLP
Trigger: GGGAAGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGACATGAGCTCCCGAGAGCTGAAGAGGCGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp GGGCCTCTTCTGAATTGGAATCGTAGTCAGTGTATCTaGGCCAGCAGAAGTGCCGGAGCCCTCCGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: GPLLNWNRSQCI*ASRSAGALRSS
Trigger: TGAGCTACGGAGGGCTCCGGCACTTCTGCTGGCCCAGATACACTGACTACGATTCCAATTCAGAAGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000403750.5
ENST00000492495.1
CDS CAA 72 bp AGACCCACGTCATCTTCAGGGATGTCATCCAGGGTCTaGGTGAGCTCTGCCAGGAGGGCCTCATTCTCACTG +
Preference number: 6 (lower is better)
Translates to: RPTSSSGMSSRV*VSSARRASFSL
Trigger: CAGTGAGAATGAGGCCCTCCTGGCAGAGCTCACCAAGACCCTGGATGACATCCCTGAAGATGACGTGGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS TCA 72 bp CCACGTCATCTTCAGGGATGTCATCCAGGGTCTTGGTaGGCTCTGCCAGGAGGGCCTCATTCTCACTGTCAA +
Preference number: 6 (lower is better)
Translates to: PRHLQGCHPGSW*ALPGGPHSHCQ
Trigger: TTGACAGTGAGAATGAGGCCCTCCTGGCAGAGCTCACCAAGACCCTGGATGACATCCCTGAAGATGACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS TCA 72 bp TCCTCTGGGGGAGGCAGTAGGTGTGCATGTAGCGTATaGGTTGCACCATCGCCTGCATGTCTTCCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: SSGGGSRCACSV*VAPSPACLPGK
Trigger: TTTCCCAGGAAGACATGCAGGCGATGGTGCAACTCATACGCTACATGCACACCTACTGCCTCCCCCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS TCA 72 bp AGGCATAAACAGGCGTGGCCAGACGGTAGGGTTTGCTaGCATCACAGAGCACGTCTTGAGCCAGAAGTTCCC +
Preference number: 6 (lower is better)
Translates to: RHKQAWPDGRVC*HHRARLEPEVP
Trigger: GGGAACTTCTGGCTCAAGACGTGCTCTGTGATGTCAGCAAACCCTACCGTCTGGCCACGCCTGTTTATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp TCAATCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTaGTTGGGTTCAGTCTCTGAGTTCTCTGGGCACCAC +
Preference number: 6 (lower is better)
Translates to: SIWKSSESSGLY*LGSVSEFSGHH
Trigger: GTGGTGCCCAGAGAACTCAGAGACTGAACCCAACCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
CDS CCA 72 bp CTCTCAGGTCTCGTCTCTGGTCTCCTACTCCAGATCTaGGTAGCAATTCGGTCTCTATCCTGCGTGTCAGCG +
Preference number: 6 (lower is better)
Translates to: LSGLVSGLLLQI*VAIRSLSCVSA
Trigger: CGCTGACACGCAGGATAGAGACCGAATTGCTACCCAGATCTGGAGTAGGAGACCAGAGACGAGACCTGAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461780.1
CDS CAA 72 bp TCGGCTCTGAGACTGCATCATGGGAGCCTTCTTGTCTaGGGTGCTGTCCGCCTTAACACAAGGCCGTTGACT +
Preference number: 6 (lower is better)
Translates to: SALRLHHGSLLV*GAVRLNTRPLT
Trigger: AGTCAACGGCCTTGTGTTAAGGCGGACAGCACCCAAGACAAGAAGGCTCCCATGATGCAGTCTCAGAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309241.10
ENST00000394320.7
CDS CAA 72 bp CTTCAGCTCTCGGGAGCTCATGTCGCTGGAGAGATTTaGAATGTACACCACGCGGCCTTCCCCAATGGCCTT +
Preference number: 6 (lower is better)
Translates to: LQLSGAHVAGEI*NVHHAAFPNGL
Trigger: AAGGCCATTGGGGAAGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGACATGAGCTCCCGAGAGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS TCA 72 bp TTCAGCTCTCGGGAGCTCATGTCGCTGGAGAGATTTTaGATGTACACCACGCGGCCTTCCCCAATGGCCTTT +
Preference number: 6 (lower is better)
Translates to: FSSRELMSLERF*MYTTRPSPMAF
Trigger: AAAGGCCATTGGGGAAGGCCGCGTGGTGTACATTCAAAATCTCTCCAGCGACATGAGCTCCCGAGAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS TCA 72 bp GGCTGGGTGGACACTGTGAGACCACCCATTACTAGATaGGGAACCGACTGCCACAGTGATTCGATACCCACA +
Preference number: 6 (lower is better)
Translates to: GWVDTVRPPITR*GTDCHSDSIPT
Trigger: TGTGGGTATCGAATCACTGTGGCAGTCGGTTCCTCATCTAGTAATGGGTGGTCTCACAGTGTCCACCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492495.1
CDS TCA 72 bp GGAGAGTATGTTATTGGGCTGGCTGGGTGGACACTGTaGGACCACCCATTACTAGATGAGGAACCGACTGCC +
Preference number: 6 (lower is better)
Translates to: GEYVIGLAGWTL*DHPLLDEEPTA
Trigger: GGCAGTCGGTTCCTCATCTAGTAATGGGTGGTCTCACAGTGTCCACCCAGCCAGCCCAATAACATACTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492495.1
CDS CCA 72 bp GTAGTTCTGTACAACTTCGGCTCTGAGACTGCATCATaGGAGCCTTCTTGTCTTGGGTGCTGTCCGCCAGTG +
Preference number: 6 (lower is better)
Translates to: VVLYNFGSETAS*EPSCLGCCPPV
Trigger: CACTGGCGGACAGCACCCAAGACAAGAAGGCTCCCATGATGCAGTCTCAGAGCCGAAGTTGTACAGAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360453.8
ENST00000403750.5
CDS GCA 72 bp AGTCCTGCTGTGCCACAGAGCTCCACTGTCAAGGTCTaGTCAAAGCTCTTCTTGCCAAAAGTTGGGTCGCTT +
Preference number: 6 (lower is better)
Translates to: SPAVPQSSTVKV*SKLFLPKVGSL
Trigger: AAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGCAGACCTTGACAGTGGAGCTCTGTGGCACAGCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp CAAAGTTATACCAAGCAGCACACTGGGGTGTGGGGATaGAAGCTATGTCCACAAGGCGCTTTAGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: QSYTKQHTGVWG*KLCPQGALALG
Trigger: ACCCAGAGCTAAAGCGCCTTGTGGACATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS CCA 72 bp TGGCTGCAAAGTTATACCAAGCAGCACACTGGGGTGTaGGGATGGAAGCTATGTCCACAAGGCGCTTTAGCT +
Preference number: 6 (lower is better)
Translates to: WLQSYTKQHTGV*GWKLCPQGALA
Trigger: AGCTAAAGCGCCTTGTGGACATAGCTTCCATCCCCACACCCCAGTGTGCTGCTTGGTATAACTTTGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394320.7
CDS CAA 72 bp CAGACGGTAGGGTTTGCTGACATCACAGAGCACGTCTaGAGCCAGAAGTTCCCTCAGAATGGAGAACTCAGC +
Preference number: 6 (lower is better)
Translates to: QTVGFADITEHV*SQKFPQNGELS
Trigger: GCTGAGTTCTCCATTCTGAGGGAACTTCTGGCTCAAGACGTGCTCTGTGATGTCAGCAAACCCTACCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 72 bp CAGAGCTCCACTGTCAAGGTCTGCTCAAAGCTCTTCTaGCCAAAAGTTGGGTCGCTTTGTGACAAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: QSSTVKVCSKLF*PKVGSLCDKAS
Trigger: GCTGGCCTTGTCACAAAGCGACCCAACTTTTGGCAAGAAGAGCTTTGAGCAGACCTTGACAGTGGAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 90 bp TCAGGGGAGGGGAGGCTGAGAGCTATTTCTTTGCCTAGACTATGCTaGATGTCTGGTTTGAAGGGATCCTCCTCTGTGGGCTTGTACGGT +
Preference number: 6 (lower is better)
Translates to: SGEGRLRAISLPRLC*MSGLKGSSSVGLYG
Trigger: ACCGTACAAGCCCACAGAGGAGGATCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGAAATAGCTCTCAGCCTCCCCTCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 90 bp TTGAGTGAGAGGCCCTCAGGGGAGGGGAGGCTGAGAGCTATTTCTTaGCCTAGACTATGCTTGATGTCTGGTTTGAAGGGATCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: LSERPSGEGRLRAIS*PRLCLMSGLKGSSS
Trigger: AGAGGAGGATCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGAAATAGCTCTCAGCCTCCCCTCCCCTGAGGGCCTCTCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 90 bp AGGCTGAGAGCTATTTCTTTGCCTAGACTATGCTTGATGTCTGGTTaGAAGGGATCCTCCTCTGTGGGCTTGTACGGTGGTGTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: RLRAISLPRLCLMSG*KGSSSVGLYGGVVG
Trigger: ACCCACCACACCACCGTACAAGCCCACAGAGGAGGATCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGAAATAGCTCTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 72 bp GGGAGGCTGAGAGCTATTTCTTTGCCTAGACTATGCTaGATGTCTGGTTTGAAGGGATCCTCCTCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: GRLRAISLPRLC*MSGLKGSSSVG
Trigger: GCCCACAGAGGAGGATCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGAAATAGCTCTCAGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CAA 72 bp GCTATTTCTTTGCCTAGACTATGCTTGATGTCTGGTTaGAAGGGATCCTCCTCTGTGGGCTTGTACGGTGGT +
Preference number: 6 (lower is better)
Translates to: AISLPRLCLMSG*KGSSSVGLYGG
Trigger: ACCACCGTACAAGCCCACAGAGGAGGATCCCTTCAAACCAGACATCAAGCATAGTCTAGGCAAAGAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309241.10
ENST00000360453.8
ENST00000394320.7
ENST00000403750.5
ENST00000434684.1
CDS CCA 72 bp AACAGTCATCACAGGCCTTTGGGGACAGTTAATCAATaGCTTTATCCCACCATTTGTGAAAGTCTCTCAGGT +
Preference number: 6 (lower is better)
Translates to: NSHHRPLGTVNQ*LYPTICESLSG
Trigger: ACCTGAGAGACTTTCACAAATGGTGGGATAAAGCCATTGATTAACTGTCCCCAAAGGCCTGTGATGACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461780.1
CDS CAA 90 bp GAACGTGAGAGTGCAGATCTCTCTGAGATCTTGATTTCATTTCCTTaGGATACATACCCAGAAGTGGGAAAAGCACAAGGTAGAATGCTG +
Preference number: 6 (lower is better)
Translates to: ERESADLSEILISFP*DTYPEVGKAQGRML
Trigger: CAGCATTCTACCTTGTGCTTTTCCCACTTCTGGGTATGTATCCAAAGGAAATGAAATCAAGATCTCAGAGAGATCTGCACTCTCACGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461780.1
CDS CAA 72 bp TGCAATGAACGTGAGAGTGCAGATCTCTCTGAGATCTaGATTTCATTTCCTTTGGATACATACCCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: CNERESADLSEI*ISFPLDTYPEV
Trigger: CACTTCTGGGTATGTATCCAAAGGAAATGAAATCAAGATCTCAGAGAGATCTGCACTCTCACGTTCATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461780.1
CDS CAA 90 bp TTTATCCATTCATCTGTCAACAAACACTTAGGTTGTTTCCATATCTaGGCTGTTGTAAATAATGCTGCAATGAACGTGAGAGTGCAGATC +
Preference number: 6 (lower is better)
Translates to: FIHSSVNKHLGCFHI*AVVNNAAMNVRVQI
Trigger: GATCTGCACTCTCACGTTCATTGCAGCATTATTTACAACAGCCAAGATATGGAAACAACCTAAGTGTTTGTTGACAGATGAATGGATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461780.1