RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPARGC1A (Homo sapiens)

Ensembl gene IDs: ENSG00000109819

Ensembl transcript IDs: ENST00000264867.7, ENST00000503714.1, ENST00000505469.1, ENST00000506055.5, ENST00000507342.5, ENST00000507380.1, ENST00000508380.1, ENST00000509642.5, ENST00000509702.5, ENST00000512169.1, ENST00000513205.5, ENST00000514479.1, ENST00000514494.1, ENST00000514517.1, ENST00000515534.5, ENST00000612355.1, ENST00000613098.4, ENST00000617484.4

Found 781 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGGGCCGCTTGGTCTTCCTTTCCTCGTGTCCACCAGTGAGGACTaGGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCC +
Preference number: 1 (lower is better)
Translates to: TGPLGLPFLVSTSED*GLAELCIQLGLLRP
Trigger: GGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAAGACCAAGCGGCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR GCA 90 bp ATCACACGGCGCTCTTCAATTGCCTTCTGCCTCTGCCTCTCCCTTTaGTTGGCCCTCTCAGACTCTCGCTTCTCATACTCTCTGCGATAT +
Preference number: 1 (lower is better)
Translates to: ITRRSSIAFCLCLSL*LALSDSRFSYSLRY
Trigger: ATATCGCAGAGAGTATGAGAAGCGAGAGTCTGAGAGGGCCAAGCAAAGGGAGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 90 bp GACCTGCTTGCTTGCCTCCAAAGTCTCTCTCAGGTAGCACTGGTCTaGATCTGTGGAAGAACAAATCTGCCCCTGCCAATCAGAGGAGAC +
Preference number: 1 (lower is better)
Translates to: DLLACLQSLSQVALV*ICGRTNLPLPIRGD
Trigger: GTCTCCTCTGATTGGCAGGGGCAGATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR GCA 90 bp CCTGGTCTTGGAGCTGTTTTCTTGTGCTGCAAGGAGAGACCTGCTTaGTTGCCTCCAAAGTCTCTCTCAGGTAGCACTGGTCTGAATCTG +
Preference number: 1 (lower is better)
Translates to: PGLGAVFLCCKERPA*LPPKSLSGSTGLNL
Trigger: CAGATTCAGACCAGTGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR GCA 90 bp TGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTTCTTGTaGTGCAAGGAGAGACCTGCTTGCTTGCCTCCAAAGTCTCTCTCA +
Preference number: 1 (lower is better)
Translates to: CSARLGFPGLGAVFL*CKERPACLPPKSLS
Trigger: TGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTaGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCC +
Preference number: 1 (lower is better)
Translates to: FMELLPFEMVCPCAF*SGAPSPHMYPHILP
Trigger: GGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR CCA 90 bp TCAGTTCACCGGTCTTGTCTGCTTCGTCGTCAAAAACAGCTTGACTaGGATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGT +
Preference number: 1 (lower is better)
Translates to: SVHRSCLLRRQKQLD*DDRSACSARLGFPG
Trigger: ACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR GCA 90 bp GGTTTTAAGCGTGTCTTCATGGAACTGCTGCCATTTGAAATGGTTTaGCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTAC +
Preference number: 1 (lower is better)
Translates to: GFKRVFMELLPFEMV*PCAFWSGAPSPHMY
Trigger: GTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGACACGCTTAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR GCA 90 bp CCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTaGTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAA +
Preference number: 1 (lower is better)
Translates to: PVRTEDLLSCAYNSD*SGPFLVELLPCVPE
Trigger: TTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR TCA 90 bp GTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTaGTGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGG +
Preference number: 1 (lower is better)
Translates to: VIALCTRRLTVPGLL*WWWHHSLARGLQLW
Trigger: CCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR TCA 90 bp TTCAGCTTTGGAGAAGCCCTAAAAGGGTTATCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGAGTTAGGCCTGCAGTTCCAGAGAGT +
Preference number: 1 (lower is better)
Translates to: FSFGEALKGLSWLAL*GGVVGGVRPAVPES
Trigger: ACTCTCTGGAACTGCAGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGGGCTTCTCCAAAGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR GCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTaGCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATG +
Preference number: 1 (lower is better)
Translates to: VHTTRIAPALSWWSY*LVYQKTHCTWASLM
Trigger: CATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CCA 90 bp TCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTaGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACT +
Preference number: 1 (lower is better)
Translates to: SWWSYCLVYQKTHCT*ASLMVVAPQSCKRT
Trigger: AGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CCA 90 bp AGGATCTTGAAGAGGATCTACTGCCTGGAGACCTTGATCTTGACCTaGAATATGGTGATCGGGAACACGACCTGTGTCGAGAAAAGGACC +
Preference number: 1 (lower is better)
Translates to: RILKRIYCLETLILT*NMVIGNTTCVEKRT
Trigger: GGTCCTTTTCTCGACACAGGTCGTGTTCCCGATCACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 90 bp TTCAGCTTTGGAGAAGCCCTAAAAGGGTTATCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTCCTTCGTGTC +
Preference number: 1 (lower is better)
Translates to: FSFGEALKGLSWLAL*GGVVGGVRPKFLRV
Trigger: GACACGAAGGAATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGGGCTTCTCCAAAGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR TCA 90 bp AGTTCTAACTGGCCAAGTCCTCACATGAACTTTCTAAGACCCGGCTaGGAAGCCTGGGAAAGTAGAACTAACCACAACCTTCAGTGTTCC +
Preference number: 1 (lower is better)
Translates to: SSNWPSPHMNFLRPG*EAWESRTNHNLQCS
Trigger: GGAACACTGAAGGTTGTGGTTAGTTCTACTTTCCCAGGCTTCTCAGCCGGGTCTTAGAAAGTTCATGTGAGGACTTGGCCAGTTAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR GCA 90 bp GCGATCTTGAACGTGATCTCACATACAAGGGAGAATTTCGGTGCGTaGGGTGTCTGTAGTGGCTTGACTCATAGTAATAGCAGGATCTTG +
Preference number: 1 (lower is better)
Translates to: AILNVISHTRENFGA*GVCSGLTHSNSRIL
Trigger: CAAGATCCTGCTATTACTATGAGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGATCACGTTCAAGATCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CCA 90 bp TGCTTGCCTCCAAAGTCTCTCTCAGGTAGCACTGGTCTGAATCTGTaGAAGAACAAATCTGCCCCTGCCAATCAGAGGAGACATCTTTAT +
Preference number: 1 (lower is better)
Translates to: CLPPKSLSGSTGLNL*KNKSAPANQRRHLY
Trigger: ATAAAGATGTCTCCTCTGATTGGCAGGGGCAGATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTGAGAGAGACTTTGGAGGCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 90 bp AAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTaGTTTTACCGACATAAATCACACGGCGCTCTTCAATTGCCTTCT +
Preference number: 1 (lower is better)
Translates to: KLQNGPSVLSVLCQV*FYRHKSHGALQLPS
Trigger: AGAAGGCAATTGAAGAGCGCCGTGTGATTTATGTCGGTAAAATCAGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CCA 90 bp AGTACAAAGGCTGATGCCCAGACATCAGCGGCTGTCATTTTAGGGTaGTTTGTGGTTGGTTGGTTGGTTGGTTGGTTGTTAGTTTTCTTT +
Preference number: 1 (lower is better)
Translates to: STKADAQTSAAVILG*FVVGWLVGWLLVFF
Trigger: AAAGAAAACTAACAACCAACCAACCAACCAACCAACCACAAACCACCCTAAAATGACAGCCGCTGATGTCTGGGCATCAGCCTTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 90 bp AATACCTTTAGGGGACTAGGATATTTCTTGACAAGATGCTTAGATTaGAGCTCACCTAAGGGATGGATGTGCGGAAAGCATCATTTTGCT +
Preference number: 1 (lower is better)
Translates to: NTFRGLGYFLTRCLD*SSPKGWMCGKHHFA
Trigger: AGCAAAATGATGCTTTCCGCACATCCATCCCTTAGGTGAGCTTCAATCTAAGCATCTTGTCAAGAAATATCCTAGTCCCCTAAAGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 90 bp ACATGGAGAGTTAAAAGAAGAACAAGAAGGAGACACATTGAACAATaGATAGGATTGCGTGCCATCCCAAGGGTAGCTCAGTTTATCACT +
Preference number: 1 (lower is better)
Translates to: TWRVKRRTRRRHIEQ*IGLRAIPRVAQFIT
Trigger: AGTGATAAACTGAGCTACCCTTGGGATGGCACGCAATCCTATTCATTGTTCAATGTGTCTCCTTCTTGTTCTTCTTTTAACTCTCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR GCA 90 bp ACACCCATGAATAAACATGTGCTTACTGGATATCATTCTGTCTCTTaGCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGT +
Preference number: 1 (lower is better)
Translates to: TPMNKHVLTGYHSVS*LFSSCVHVNHCCYC
Trigger: ACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGTAAGCACATGTTTATTCATGGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR TCA 90 bp GGCTATTCTAGGTCATCTATAGATCAGGTCTTAGACTACAGTGATTaGAGTTCTCATTACAGCCATCAAGAAAGGACACATAATCATTAC +
Preference number: 1 (lower is better)
Translates to: GYSRSSIDQVLDYSD*SSHYSHQERTHNHY
Trigger: GTAATGATTATGTGTCCTTTCTTGATGGCTGTAATGAGAACTTCAATCACTGTAGTCTAAGACCTGATCTATAGATGACCTAGAATAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CCA 90 bp GTTCTCATTACAGCCATCAAGAAAGGACACATAATCATTACCTACTaGAAGCTCACATCTAAAGGCATGAAAAGGTTTCCTTTTATCAAC +
Preference number: 1 (lower is better)
Translates to: VLITAIKKGHIIITY*KLTSKGMKRFPFIN
Trigger: GTTGATAAAAGGAAACCTTTTCATGCCTTTAGATGTGAGCTTCCAGTAGGTAATGATTATGTGTCCTTTCTTGATGGCTGTAATGAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 90 bp GTGTCTGCAGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTaGAGTCCATTGAGGAAAACTATCTTCATGGTAACAATATTTGTC +
Preference number: 1 (lower is better)
Translates to: VSAEDTKAPLILDAI*SPLRKTIFMVTIFV
Trigger: GACAAATATTGTTACCATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCTGCAGACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR TCA 90 bp CTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGAGGACGCGCTGTCCCATaGGGTATTCGCCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: LGLLRPFLGGVIALCTRRGRAVP*GIRHPS
Trigger: AGAGGGATGGCGAATACCTCATGGGACAGCGCGTCC...TCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp GGGATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTaGGAGCTGTTTTCTTGTGCTGCAAGGAGAGACCTGCTTGCTTGC +
Preference number: 2 (lower is better)
Translates to: GMTEVLVQLGSDFLV*ELFSCAARRDLLAC
Trigger: GCAAGCAAGCAGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp GCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTTCTaGTGCTGCAAGGAGAGACCTGCTTGCTTGCCTCCAAAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: ACSARLGFPGLGAVF*CCKERPACLPPKSL
Trigger: GAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp GTCCCTCAGTTCACCGGTCTTGTCTGCTTCGTCGTCAAAAACAGCTaGACTGGGATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTC +
Preference number: 2 (lower is better)
Translates to: VPQFTGLVCFVVKNS*TGMTEVLVQLGSDF
Trigger: GAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAACTGAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp AATCACACGGCGCTCTTCAATTGCCTTCTGCCTCTGCCTCTCCCTTaGCTTGGCCCTCTCAGACTCTCGCTTCTCATACTCTCTGCGATA +
Preference number: 2 (lower is better)
Translates to: NHTALFNCLLPLPLP*LGPLRLSLLILSAI
Trigger: TATCGCAGAGAGTATGAGAAGCGAGAGTCTGAGAGGGCCAAGCAAAGGGAGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGTGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR TCA 90 bp GACTCACTGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGTCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: DSLYLGFFDGGGTTVLQESWLAL*GGVVGG
Trigger: TCCACCCACCACTCCTCCTCATAAAGCCAACCAAGA...CTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR TCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGGTACCTGGGCTTCTTTaGTGGTGGTGGCACCACAGT +
Preference number: 2 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVVPGLL*WWWHHS
Trigger: ACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTAC...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR CCA 90 bp CTCTGTCATCCTCAGCTAGGGAACATGTTACCTGCGCAAGCTTCTCTGAGCTTCCAAACAGCCGCAGACTaGGCCGCTTGGTCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: LCHPQLGNMLPAQASLSFQTAAD*AAWSSF
Trigger: AAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTG...GAAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCTAGCTGAGGATGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp GGTCTTGGAGCTGTTTTCTTGTGCTGCAAGGAGAGACCTGCTTGCTaGCCTCCAAAGTCTCTCTCAGGTAGCACTGGTCTGAATCTGTGG +
Preference number: 2 (lower is better)
Translates to: GLGAVFLCCKERPAC*PPKSLSGSTGLNLW
Trigger: CCACAGATTCAGACCAGTGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR TCA 90 bp CTCTGTCATCCTCAGCTAGGGAACATGTTACCTGCGCAAGCTTCTCTGAGCTTCTCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LCHPQLGNMLPAQASLSFSWLAL*GGVVGG
Trigger: TCCACCCACCACTCCTCCTCATAAAGCCAACCAAGA...GAAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCTAGCTGAGGATGACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR GCA 90 bp ATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTGCATACAACTCGGATTaGTCCGGCCCTTTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: MTEVLVQLGSDFLVLELFAYNSD*SGPFLV
Trigger: CACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGC...AAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CCA 90 bp AGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTATGAGGAGGAGTGGTaGGTGGAGTTAGGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: RTEDLLSCAYNSDCSGPFYEEEW*VELGPN
Trigger: ATTTGGGCCTAACTCCACCCACCACTCCTCCTCATA...GAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR-3UTR CCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGCTTTATGAGGAGGAGTaGTGGGTGGAGTTAGGCCCA +
Preference number: 2 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVLYEEE*WVELGP
Trigger: TGGGCCTAACTCCACCCACCACTCCTCCTCATAAAG...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR-3UTR CCA 90 bp TCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATGCTCCGGCCCTTTCTTaGTGGAGTTATTGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: SCPPVRTEDLLSCAYNSDAPALS*WSYCLV
Trigger: CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC...ATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR CCA 90 bp CAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGACTTTATGAGGAGGAGTaGTGGGTGGAGTTAGGCCTG +
Preference number: 2 (lower is better)
Translates to: QLGLLRPFLGGVIALCTRLYEEE*WVELGL
Trigger: CAGGCCTAACTCCACCCACCACTCCTCCTCATAAAG...TCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR TCA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGGTCACCTTGTTGAGCTaGCATTGCTTTGCCATTCCC +
Preference number: 2 (lower is better)
Translates to: ASLMVVAPQSCKRTSALEVTLLS*HCFAIP
Trigger: GGGAATGGCAAAGCAATGTCAGCTCAACAAGGTGAC...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR-3UTR CCA 90 bp TTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTGCAGACTGGGCCGCTTaGTCTTCCTTTCCTCGTGTC +
Preference number: 2 (lower is better)
Translates to: FTKNFKTVPQFCPCCVRSADWAA*SSFPRV
Trigger: GACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGC...AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp CCCGGTGTCCGCTCCTCAGAAAGAACCGCTGAACAAGCTGCACGCTaGACCATTGACAAGGCTTTTGAAATTTGCAGTGGAAGATCAACA +
Preference number: 2 (lower is better)
Translates to: PGVRSSERTAEQAAR*TIDKAFEICSGRST
Trigger: TGTTGATCTTCCACTGCAAATTTCAAAAGCCTTGTCAATGGTCAAGCGTGCAGCTTGTTCAGCGGTTCTTTCTGAGGAGCGGACACCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CAA 90 bp GACTCACTGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTaGCAAGAGGACTTCAGCTTTGGAGAAGCCCTAAAAGGGTTATCT +
Preference number: 2 (lower is better)
Translates to: DSLYLGFFDGGGTTV*QEDFSFGEALKGLS
Trigger: AGATAACCCTTTTAGGGCTTCTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CAA 90 bp GACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTaGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTG +
Preference number: 2 (lower is better)
Translates to: DLLSCAYNSDCSGPF*VELLPCVPEDSLYL
Trigger: CAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR TCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATGGACGCGCTGTCCCATaGGGTATTCGCCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHGRAVP*GIRHPS
Trigger: AGAGGGATGGCGAATACCTCATGGGACAGCGCGTCC...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR-3UTR TCA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGAGCAAAGAAGCAGCTTaGTATGTCTTTGTAAAGGAT +
Preference number: 2 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVSKEAA*YVFVKD
Trigger: ATCCTTTACAAAGACATATCAAGCTGCTTCTTTGCT...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR-3UTR GCA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGCTGAGTTTCAGTGTCTaGATATGTAAAACAGGAATG +
Preference number: 2 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVLSFSV*ICKTGM
Trigger: CATTCCTGTTTTACATATGCAGACACTGAAACTCAG...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR-3UTR CCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGAAGACTCACTGTACCTaGGCTTCTTTGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVKTHCT*ASLMVV
Trigger: CACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTT...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR CCA 90 bp ATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTCCGGCCCTTTCTTGGTaGAGTTATTGCCTTGTGTAC +
Preference number: 2 (lower is better)
Translates to: ISHTRENFGACGVCSGLTPALSW*SYCLVY
Trigger: GTACACAAGGCAATAACTCCACCAAGAAAGGGCCGG...AGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CCA 90 bp ATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTAGTCTTGTTCTCAAATaGGGAACCCTTGGGGTCACT +
Preference number: 2 (lower is better)
Translates to: MTEVLVQLGSDFLVLELFSLVLK*GTLGVT
Trigger: AGTGACCCCAAGGGTTCCCCATTTGAGAACAAGACT...AAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp AGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTaGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: SYCLVYQKTHCTWAS*MVVAPQSCKRTSAL
Trigger: CAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CAA 90 bp TGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATaGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGAT +
Preference number: 2 (lower is better)
Translates to: CAYNSDCSGPFLVEL*PCVPEDSLYLGFFD
Trigger: ATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CAA 90 bp CCTGCAGTTCCAGAGAGTTCCACACTTAAGGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCCTTGGGGTCACTGGAAGATATGGCA +
Preference number: 2 (lower is better)
Translates to: PAVPESSTLKVRSIV*FSNGEPLGSLEDMA
Trigger: TGCCATATCTTCCAGTGACCCCAAGGGTTCCCCATTTGAGAACAAGACTATTGAACGCACCTTAAGTGTGGAACTCTCTGGAACTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR TCA 90 bp TATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTCCAAACCGTCACCTTGTTaGGCTGACATTGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: YLGWLYEEEWWVELGPNSKPSPC*ADIALP
Trigger: TGGCAAAGCAATGTCAGCTCAACAAGGTGACGGTTT...GGAATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR-3UTR GCA 90 bp CATCCTCAGCTAGGGAACATGTTACCTGCGCAAGCTTCTCTGAGCTTCTTTCAGGAACAAATCTGCCCCTaGCAATCAGAGGAGACATCT +
Preference number: 2 (lower is better)
Translates to: HPQLGNMLPAQASLSFFQEQICP*QSEETS
Trigger: AGATGTCTCCTCTGATTGGCAGGGGCAGATTTGTTC...CTGAAAGAAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCTAGCTGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR GCA 90 bp TTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTCTGCAAGGAGAGACCTaGTTGCTTGCCTCCAAAGTC +
Preference number: 2 (lower is better)
Translates to: FTKNFKTVPQFCPCCVRSLQGET*LLASKV
Trigger: GACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAG...AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CCA 90 bp CTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGAAAGGGTTATCTTGGTTaGCTTTATGAGGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LGLLRPFLGGVIALCTRRKGYLG*LYEEEW
Trigger: CCACTCCTCCTCATAAAGCCAACCAAGATAACCCTT...TCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR CCA 90 bp TTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAAGGGTTATCTTGGTTaGCTTTATGAGGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: FLSSCPPVRTEDLLSCAYKGYLG*LYEEEW
Trigger: CCACTCCTCCTCATAAAGCCAACCAAGATAACCCTT...GTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR CCA 90 bp ATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTACTGGTCTGAATCTGTaGAAGAACAAATCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: MTEVLVQLGSDFLVLELFTGLNL*KNKSAP
Trigger: AGGGGCAGATTTGTTCTTCCACAGATTCAGACCAGT...AAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp AATAGCAGGATCTTGAAGAGGATCTACTGCCTGGAGACCTTGATCTaGACCTGGAATATGGTGATCGGGAACACGACCTGTGTCGAGAAA +
Preference number: 2 (lower is better)
Translates to: NSRILKRIYCLETLI*TWNMVIGNTTCVEK
Trigger: TTTCTCGACACAGGTCGTGTTCCCGATCACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATCCTGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp CATAGTAATAGCAGGATCTTGAAGAGGATCTACTGCCTGGAGACCTaGATCTTGACCTGGAATATGGTGATCGGGAACACGACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: HSNSRILKRIYCLET*ILTWNMVIGNTTCV
Trigger: GACACAGGTCGTGTTCCCGATCACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATCCTGCTATTACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 90 bp TCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTaGACTCATAGTAATAGCAGGATCTTGAAGAGGATCTACTGCCTG +
Preference number: 2 (lower is better)
Translates to: SHTRENFGACGVCSG*THSNSRILKRIYCL
Trigger: CAGGCAGTAGATCCTCTTCAAGATCCTGCTATTACTATGAGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR GCA 90 bp TCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTCTTGGTGGAGTTATTaGCTTGTGTACCAGAAGACT +
Preference number: 2 (lower is better)
Translates to: SCPPVRTEDLLSCAYNSDSWWSY*LVYQKT
Trigger: AGTCTTCTGGTACACAAGGCAATAACTCCACCAAGA...ATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR CCA 90 bp ATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTAGAGGACTTCAGCTTTaGAGAAGCCCTAAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: ISHTRENFGACGVCSGLTRGLQL*RSPKRV
Trigger: AACCCTTTTAGGGCTTCTCCAAAGCTGAAGTCCTCT...AGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CCA 90 bp TTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTCAAATGGGGAACCCTTaGGGTCACTGGAAGATATGG +
Preference number: 2 (lower is better)
Translates to: FTKNFKTVPQFCPCCVRSQMGNP*GHWKIW
Trigger: CCATATCTTCCAGTGACCCCAAGGGTTCCCCATTTG...AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR TCA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTGGAACTGCTGCCATTTaGAATGGTTTGCCCTTGCGC +
Preference number: 2 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLIGTAAI*NGLPLR
Trigger: GCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCC...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR GCA 90 bp TCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACGAGCTGACATTGCTTTaGCATTCCCATTTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: SGPFLVELLPCVPEDSLYELTLL*HSHFRN
Trigger: GTTTCTGAAATGGGAATGGCAAAGCAATGTCAGCTC...GTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR-3UTR GCA 90 bp TTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTTTCACCGGTCTTGTCTaGTTCGTCGTCAAAAACAGC +
Preference number: 2 (lower is better)
Translates to: FTKNFKTVPQFCPCCVRSFTGLV*FVVKNS
Trigger: GCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAA...AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CCA 90 bp TGCGGTGTCTGTAGTGGCTTGACTCATAGTAATAGCAGGATCTTGAAGAGGATCCGGATTTCCTGGTCTTaGAGCTGTTTTCTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: CGVCSGLTHSNSRILKRIRISWS*SCFLVL
Trigger: CAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCG...GATCCTCTTCAAGATCCTGCTATTACTATGAGTCAAGCCACTACAGACACCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR TCA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATGGACGCGCTGTCCCATaGGGTATTCGCCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHGRAVP*GIRHPS
Trigger: AGAGGGATGGCGAATACCTCATGGGACAGCGCGTCC...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR GCA 90 bp CACGGCATGAAGGCAATGGCCCACGGTCTTCTAAAAATCCTACAGATCTATGCTCGGAAAGCATCATTTTaGTCTTGTTGCACTCAACAG +
Preference number: 2 (lower is better)
Translates to: HGMKAMAHGLLKILQIYARKASF*SCCTQQ
Trigger: CTGTTGAGTGCAACAAGAGCAAAATGATGCTTTCCG...AGCATAGATCTGTAGGATTTTTAGAAGACCGTGGGCCATTGCCTTCATGCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR GCA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGTGCAATAGATTTAAATaGCTTCTGCCAAAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: ASLMVVAPQSCKRTSALECNRFK*LLPKEH
Trigger: ATGCTCTTTTGGCAGAAGGCATTTAAATCTATTGCA...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR-3UTR CCA 90 bp GGGAAAGTAGAACTAACCACAACCTTCAGTGTTCCCTCCACCTTGTTCTGTCTCTGTCTTTGTAAAGGATaGCTGTCACCCAAATTCATG +
Preference number: 2 (lower is better)
Translates to: GKVELTTTFSVPSTLFCLCLCKG*LSPKFM
Trigger: CATGAATTTGGGTGACAGCCATCCTTTACAAAGACA...GAGACAGAACAAGGTGGAGGGAACACTGAAGGTTGTGGTTAGTTCTACTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR-3UTR TCA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATACAGAGTACAAAGGCTaGTGCCCAGACATCAGCGGC +
Preference number: 2 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHTEYKG*CPDISG
Trigger: GCCGCTGATGTCTGGGCATCAGCCTTTGTACTCTGT...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR GCA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATCGCATTCTGGTCAGGTaGCCCCAGTCCTCACATGTA +
Preference number: 2 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHRILVR*PQSSHV
Trigger: TACATGTGAGGACTGGGGGCACCTGACCAGAATGCG...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR GCA 90 bp ATTACAGCCATCAAGAAAGGACACATAATCATTACCTACTGGAAGCTCACATCTACTTTAGCATTCTGGTaGCCGCAGTATCCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: ITAIKKGHIIITYWKLTSTLAFW*PQYPLP
Trigger: TGGGAGAGGATACTGCGGGCACCAGAATGCTAAAGT...AGATGTGAGCTTCCAGTAGGTAATGATTATGTGTCCTTTCTTGATGGCTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR TCA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTAGCAATTACACTATCTaGACACATCTCAGAGAGTTC +
Preference number: 2 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLISNYTI*THLREF
Trigger: GAACTCTCTGAGATGTGTTCAGATAGTGTAATTGCT...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR TCA 90 bp TCATCAAACAGGCCATCCATGGCTAGTCCTGAATTTATAAACATAGGTAGTTTGCAGGTAGCACTGGTCTaGATCTGTGGAAGAACAAAT +
Preference number: 2 (lower is better)
Translates to: SSNRPSMASPEFINIGSLQVALV*ICGRTN
Trigger: ATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTG...CAAACTACCTATGTTTATAAATTCAGGACTAGCCATGGATGGCCTGTTTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR GCA 90 bp ATTTTCAAGAGCAGCAAAAGCATCACAGGTATAACGGTAGGTAATGAAACCATAGGACTTGCTGAGTTGTaGATACAACTCGGATTGCTC +
Preference number: 2 (lower is better)
Translates to: IFKSSKSITGITVGNETIGLAEL*IQLGLL
Trigger: GAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCC...TATGGTTTCATTACCTACCGTTATACCTGTGATGCTTTTGCTGCTCTTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CCA 90 bp ATTTTCAAGAGCAGCAAAAGCATCACAGGTATAACGGTAGGTAATGAAACCATATCGGCTCGGATTTCCTaGTCTTGGAGCTGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: IFKSSKSITGITVGNETISARIS*SWSCFL
Trigger: AAGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGA...TATGGTTTCATTACCTACCGTTATACCTGTGATGCTTTTGCTGCTCTTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR TCA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTCAATTTGAAGTCCATTaGGGAAAACTATCTTCATGG +
Preference number: 2 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLIQFEVH*GKLSSW
Trigger: CCATGAAGATAGTTTTCCTCAATGGACTTCAAATTG...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR TCA 90 bp TTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGAGTGAGCAAGGATATAAACTTTaGAGTCCGATAAATTTGGGG +
Preference number: 2 (lower is better)
Translates to: LMQHDLEWACNLTSVLSEQGYKL*SPINLG
Trigger: CCCCAAATTTATCGGACTTCAAAGTTTATATCCTTG...CTCACTCAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR-3UTR CCA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTAGGATATTAGTTCTATaGAACCTGTGGTTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLIRILVL*NLWFLQ
Trigger: CTGAAGAAACCACAGGTTCCATAGAACTAATATCCT...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR CCA 90 bp TTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGAGTGAGGTCAACTGTGTGATTTaGGGAAAACAAATAACCTCT +
Preference number: 2 (lower is better)
Translates to: LMQHDLEWACNLTSVLSEVNCVI*GKQITS
Trigger: AGAGGTTATTTGTTTTCCCCAAATCACACAGTTGAC...CTCACTCAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR-3UTR CCA 90 bp GTTTATTTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGTTTACCAGTTCTAACTaGCCAAGTCCTCACATGAAC +
Preference number: 2 (lower is better)
Translates to: VYLMQHDLEWACNLTSVLFTSSN*PSPHMN
Trigger: GTTCATGTGAGGACTTGGCCAGTTAGAACTGGTAAA...CAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAAATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR-3UTR GCA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGCCATTTGAAATGGTTTaGCCTTGCGCATTCTGGTCA +
Preference number: 2 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELPFEMV*PCAFWS
Trigger: TGACCAGAATGCGCAAGGGCAAACCATTTCAAATGG...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR-3UTR TCA 90 bp GTTGTGATAAAGAAAACTAGCCGATATGTCATCCTTCGTTTAATTCACTTGCCACAAGTAAATGAGTACTaGTCTTGTGGGAAAGAATTC +
Preference number: 2 (lower is better)
Translates to: VVIKKTSRYVILRLIHLPQVNEY*SCGKEF
Trigger: GAATTCTTTCCCACAAGATCAGTACTCATTTACTTG...TGGCAAGTGAATTAAACGAAGGATGACATATCGGCTAGTTTTCTTTATCACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR CAA 90 bp TTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTaGTTATTGTTGTTGTTGTTCTTGTTGTATTGTTGTTGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: FCLLPLQQLCSCKPL*LLLLLFLLYCCCFV
Trigger: AACAAAACAACAACAATACAACAAGAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR CCA 72 bp CTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTaGTCAGGTGCCCCCAGTCCTCACATGTACCCACAC +
Preference number: 3 (lower is better)
Translates to: LLPFEMVCPCAF*SGAPSPHMYPH
Trigger: GTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR-3UTR CAA 90 bp TGTGCTGCAAGGAGAGACCTGCTTGCTTGCCTCCAAAGTCTCTCTCAGGTAGCATGTACCTGGGCTTCTTaGATGGTGGTGGCACCACAG +
Preference number: 3 (lower is better)
Translates to: CAARRDLLACLQSLSQVACTWAS*MVVAPQ
Trigger: CTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA...TGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR GCA 72 bp CGTGTCTTCATGGAACTGCTGCCATTTGAAATGGTTTaGCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCT +
Preference number: 3 (lower is better)
Translates to: RVFMELLPFEMV*PCAFWSGAPSP
Trigger: AGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR CCA 72 bp CGGTCTTGTCTGCTTCGTCGTCAAAAACAGCTTGACTaGGATGACCGAAGTGCTTGTTCAGCTCGGCTCGGA +
Preference number: 3 (lower is better)
Translates to: RSCLLRRQKQLD*DDRSACSARLG
Trigger: TCCGAGCCGAGCTGAACAAGCACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGACGAAGCAGACAAGACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CAA 90 bp TCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGTACCTGGGCTTCTTaGATGGTGGTGGCACCACAG +
Preference number: 3 (lower is better)
Translates to: SCPPVRTEDLLSCAYNSDCTWAS*MVVAPQ
Trigger: CTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA...ATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR GCA 72 bp ACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTaGCTTGTGTACCAGAAGACTCACTGTACCTGGGCT +
Preference number: 3 (lower is better)
Translates to: TRIAPALSWWSY*LVYQKTHCTWA
Trigger: AGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR GCA 72 bp GGAGCTGTTTTCTTGTGCTGCAAGGAGAGACCTGCTTaGTTGCCTCCAAAGTCTCTCTCAGGTAGCACTGGT +
Preference number: 3 (lower is better)
Translates to: GAVFLCCKERPA*LPPKSLSGSTG
Trigger: ACCAGTGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACAAGAAAACAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CAA 90 bp TCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTaGGTGGAGTTATTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: SCPPVRTEDLLSCAYNSDCSGPF*VELLPC
Trigger: ACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCA...ATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR-3UTR CAA 90 bp CATCCTCAGCTAGGGAACATGTTACCTGCGCAAGCTTCTCTGAGCTTCTTTCAGTGCTCCGGCCCTTTCTaGGTGGAGTTATTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: HPQLGNMLPAQASLSFFQCSGPF*VELLPC
Trigger: ACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCA...CTGAAAGAAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCTAGCTGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CAA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGTGTCAACTGTGTGATTaGGGGAAAACAAATAACCTC +
Preference number: 3 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVCQLCD*GKTNNL
Trigger: GAGGTTATTTGTTTTCCCCAAATCACACAGTTGACA...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR TCA 72 bp CTTGGTCTTCCTTTCCTCGTGTCCACCAGTGAGGACTaGGGACTTGCTGAGTTGTGCATACAACTCGGATTG +
Preference number: 3 (lower is better)
Translates to: LGLPFLVSTSED*GLAELCIQLGL
Trigger: CAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR TCA 72 bp GGAGAAGCCCTAAAAGGGTTATCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGAGTTAGGCCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: GEALKGLSWLAL*GGVVGGVRPAV
Trigger: AACTGCAGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGGGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 72 bp GCTTGCCTCCAAAGTCTCTCTCAGGTAGCACTGGTCTaGATCTGTGGAAGAACAAATCTGCCCCTGCCAATC +
Preference number: 3 (lower is better)
Translates to: ACLQSLSQVALV*ICGRTNLPLPI
Trigger: GATTGGCAGGGGCAGATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTGAGAGAGACTTTGGAGGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CCA 72 bp TTAAGCGTGTCTTCATGGAACTGCTGCCATTTGAAATaGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCA +
Preference number: 3 (lower is better)
Translates to: LSVSSWNCCHLK*FALAHSGQVPP
Trigger: TGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGACACGCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR CCA 72 bp AAGAGGATCTACTGCCTGGAGACCTTGATCTTGACCTaGAATATGGTGATCGGGAACACGACCTGTGTCGAG +
Preference number: 3 (lower is better)
Translates to: KRIYCLETLILT*NMVIGNTTCVE
Trigger: CTCGACACAGGTCGTGTTCCCGATCACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CAA 90 bp GACTCACTGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGCTTGTTGAGCTGACATaGCTTTGCCATTCCCATTTC +
Preference number: 3 (lower is better)
Translates to: DSLYLGFFDGGGTTVLQELVELT*LCHSHF
Trigger: GAAATGGGAATGGCAAAGCAATGTCAGCTCAACAAG...CTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR-3UTR CAA 90 bp TCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACTCAAATGGGGAACCCTaGGGGTCACTGGAAGATATG +
Preference number: 3 (lower is better)
Translates to: SGPFLVELLPCVPEDSLYSNGEP*GSLEDM
Trigger: CATATCTTCCAGTGACCCCAAGGGTTCCCCATTTGA...GTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CAA 90 bp CATCCTCAGCTAGGGAACATGTTACCTGCGCAAGCTTCTCTGAGCTTCTTTCAGGAGTCATACTTGCTCTaGGTGGAAGCAGGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: HPQLGNMLPAQASLSFFQESYLL*VEAGSK
Trigger: CTTTGACCCTGCTTCCACCAAGAGCAAGTATGACTC...CTGAAAGAAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCTAGCTGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 72 bp GGAGAAGCCCTAAAAGGGTTATCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTC +
Preference number: 3 (lower is better)
Translates to: GEALKGLSWLAL*GGVVGGVRPKF
Trigger: GAATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGGGCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR TCA 72 bp TTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTaGTGGTGGTGGCACCACAGTCTTGCAAGAGGACTT +
Preference number: 3 (lower is better)
Translates to: LCTRRLTVPGLL*WWWHHSLARGL
Trigger: AAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR GCA 72 bp ACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTaGTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: TEDLLSCAYNSD*SGPFLVELLPC
Trigger: ACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR GCA 72 bp ACTGAAATCACTGTCCCTCAGTTCACCGGTCTTGTCTaGTTCGTCGTCAAAAACAGCTTGACTGGGATGACC +
Preference number: 3 (lower is better)
Translates to: TEITVPQFTGLV*FVVKNSLTGMT
Trigger: GGTCATCCCAGTCAAGCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAACTGAGGGACAGTGATTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CCA 72 bp GCTGATGCCCAGACATCAGCGGCTGTCATTTTAGGGTaGTTTGTGGTTGGTTGGTTGGTTGGTTGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: ADAQTSAAVILG*FVVGWLVGWLL
Trigger: TAACAACCAACCAACCAACCAACCAACCACAAACCACCCTAAAATGACAGCCGCTGATGTCTGGGCATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CCA 72 bp AAGGGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTaGGTGGAGTTAGGCCCAAATTCCTTCGTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: KGYLGWLYEEEW*VELGPNSFVSV
Trigger: CACAGACACGAAGGAATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR CCA 72 bp AGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTaGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGC +
Preference number: 3 (lower is better)
Translates to: SYCLVYQKTHCT*ASLMVVAPQSC
Trigger: GCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CCA 72 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTaGAGTTATTGCCTTGTGTACCAGAAGACTCACTGT +
Preference number: 3 (lower is better)
Translates to: VHTTRIAPALSW*SYCLVYQKTHC
Trigger: ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CCA 72 bp GTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTaGTGGAGTTATTGCCTTGTGTACCAGAAGACTCAC +
Preference number: 3 (lower is better)
Translates to: VVHTTRIAPALS*WSYCLVYQKTH
Trigger: GTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CCA 72 bp CCAAAGTCTCTCTCAGGTAGCACTGGTCTGAATCTGTaGAAGAACAAATCTGCCCCTGCCAATCAGAGGAGA +
Preference number: 3 (lower is better)
Translates to: PKSLSGSTGLNL*KNKSAPANQRR
Trigger: TCTCCTCTGATTGGCAGGGGCAGATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTGAGAGAGACTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CAA 90 bp CACGGCATGAAGGCAATGGCCCACGGTCTTCTAAAAATCCTACAGATCTATGCTTGGAACTGCTGCCATTaGAAATGGTTTGCCCTTGCG +
Preference number: 3 (lower is better)
Translates to: HGMKAMAHGLLKILQIYAWNCCH*KWFALA
Trigger: CGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCA...AGCATAGATCTGTAGGATTTTTAGAAGACCGTGGGCCATTGCCTTCATGCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR CAA 90 bp CTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTCCTAAAAGGGTTATCTaGGTTGGCTTTATGAGGAGG +
Preference number: 3 (lower is better)
Translates to: LAELCIQLGLLRPFLGGVPKRVI*VGFMRR
Trigger: CCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGG...AACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR TCA 72 bp TGGCCAAGTCCTCACATGAACTTTCTAAGACCCGGCTaGGAAGCCTGGGAAAGTAGAACTAACCACAACCTT +
Preference number: 3 (lower is better)
Translates to: WPSPHMNFLRPG*EAWESRTNHNL
Trigger: AAGGTTGTGGTTAGTTCTACTTTCCCAGGCTTCTCAGCCGGGTCTTAGAAAGTTCATGTGAGGACTTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR TCA 72 bp AACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTaGTTTTACCGACATAAATCACACGGCGCTCTTCAA +
Preference number: 3 (lower is better)
Translates to: NGPSVLSVLCQV*FYRHKSHGALQ
Trigger: TTGAAGAGCGCCGTGTGATTTATGTCGGTAAAATCAGACCTGACACAACACGGACAGAACTGAGGGACCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR GCA 72 bp ACACACACCACACACATACATACACACACACATACATaGACACACGCACACTCCATCACCAAGAGACTCCAG +
Preference number: 3 (lower is better)
Translates to: THTTHIHTHTHT*THAHSITKRLQ
Trigger: CTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTATGTATGTGTGTGGTGTGTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR-3UTR CAA 90 bp TGCGGTGTCTGTAGTGGCTTGACTCATAGTAATAGCAGGATCTTGAAGAGGATCGGTGGAGTTATTGCCTaGTGTACCAGAAGACTCACT +
Preference number: 3 (lower is better)
Translates to: CGVCSGLTHSNSRILKRIGGVIA*CTRRLT
Trigger: AGTGAGTCTTCTGGTACACAAGGCAATAACTCCACC...GATCCTCTTCAAGATCCTGCTATTACTATGAGTCAAGCCACTACAGACACCGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 72 bp ATGCAGCTATCAAAATTAGCTGCATTGGCCTGGGGGTaGAATCCATCTTACAAGATCGTGTTGGGCGAGAGA +
Preference number: 3 (lower is better)
Translates to: MQLSKLAALAWG*NPSYKIVLGER
Trigger: TCTCTCGCCCAACACGATCTTGTAAGATGGATTTCACCCCCAGGCCAATGCAGCTAATTTTGATAGCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR GCA 72 bp AACGTGATCTCACATACAAGGGAGAATTTCGGTGCGTaGGGTGTCTGTAGTGGCTTGACTCATAGTAATAGC +
Preference number: 3 (lower is better)
Translates to: NVISHTRENFGA*GVCSGLTHSNS
Trigger: GCTATTACTATGAGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGATCACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 72 bp AATAGTGCAAAGTTCCCTCTCTGCTGCTTTGAATGTTaGCAGCCCAACTGTTGTTCTCGGAGTCGTTTAGCA +
Preference number: 3 (lower is better)
Translates to: NSAKFPLCCFEC*QPNCCSRSRLA
Trigger: TGCTAAACGACTCCGAGAACAACAGTTGGGCTGTCAACATTCAAAGCAGCAGAGAGGGAACTTTGCACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 72 bp GCGTCCACAAAAGTACAGCTCAAAGTCAGTTTCGTTTaGCCTGCGCAAAGTGTATCCATTTTCAAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: ASTKVQLKVSFV*PAQSVSIFKSS
Trigger: GCTGCTCTTGAAAATGGATACACTTTGCGCAGGTCAAACGAAACTGACTTTGAGCTGTACTTTTGTGGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CCA 72 bp GACATCAGCGGCTGTCATTTTAGGGTGGTTTGTGGTTaGTTGGTTGGTTGGTTGGTTGTTAGTTTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: DISGCHFRVVCG*LVGWLVVSFLS
Trigger: GGAAAGAAAACTAACAACCAACCAACCAACCAACCAACCACAAACCACCCTAAAATGACAGCCGCTGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR CAA 90 bp CTGTCATCAAACAGGCCATCCATGGCTAGTCCTGAATTTATAAACATAGGTAGTGTCGTCAAAAACAGCTaGACTGGGATGACCGAAGTG +
Preference number: 3 (lower is better)
Translates to: LSSNRPSMASPEFINIGSVVKNS*TGMTEV
Trigger: CACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGAC...ACTACCTATGTTTATAAATTCAGGACTAGCCATGGATGGCCTGTTTGATGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 72 bp AGGGGACTAGGATATTTCTTGACAAGATGCTTAGATTaGAGCTCACCTAAGGGATGGATGTGCGGAAAGCAT +
Preference number: 3 (lower is better)
Translates to: RGLGYFLTRCLD*SSPKGWMCGKH
Trigger: ATGCTTTCCGCACATCCATCCCTTAGGTGAGCTTCAATCTAAGCATCTTGTCAAGAAATATCCTAGTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR GCA 72 bp ACTCATAGTAATAGCAGGATCTTGAAGAGGATCTACTaGCTGGAGACCTTGATCTTGACCTGGAATATGGTG +
Preference number: 3 (lower is better)
Translates to: THSNSRILKRIY*LETLILTWNMV
Trigger: CACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATCCTGCTATTACTATGAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CAA 90 bp GAATACACACTCCAAATGTTACTGAATTCCATTCCAGGGACTCCACACTCAGATGCGGAAAGCATCATTTaGCTCTTGTTGCACTCAACA +
Preference number: 3 (lower is better)
Translates to: EYTLQMLLNSIPGTPHSDAESII*LLLHST
Trigger: TGTTGAGTGCAACAAGAGCAAAATGATGCTTTCCGC...ATCTGAGTGTGGAGTCCCTGGAATGGAATTCAGTAACATTTGGAGTGTGTATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 72 bp ATTCCTTCGTGTCTGTGGTTTAAACCGTCACCTTGTTaGGCTGACATTGCTTTGCCATTCCCATTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: IPSCLWFKPSPC*ADIALPFPFQK
Trigger: TTTCTGAAATGGGAATGGCAAAGCAATGTCAGCTCAACAAGGTGACGGTTTAAACCACAGACACGAAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR GCA 72 bp AACCATAGCTGTCTCCATCATCCCGCAGATTTACTGTaGACTCCTCAATTTCACCAAAAACTTCAAAACGGT +
Preference number: 3 (lower is better)
Translates to: NHSCLHHPADLL*TPQFHQKLQNG
Trigger: ACCGTTTTGAAGTTTTTGGTGAAATTGAGGAGTGCACAGTAAATCTGCGGGATGATGGAGACAGCTATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CCA 72 bp TCAGCGGCTGTCATTTTAGGGTGGTTTGTGGTTGGTTaGTTGGTTGGTTGGTTGTTAGTTTTCTTTCCTTTT +
Preference number: 3 (lower is better)
Translates to: SAAVILGWFVVG*LVGWLLVFFPF
Trigger: AAAAGGAAAGAAAACTAACAACCAACCAACCAACCAACCAACCACAAACCACCCTAAAATGACAGCCGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR GCA 72 bp CTTTCAGTAAACTATCAAAATCCAGAGAGTCATACTTaGTCTTGGTGGAAGCAGGGTCAAAGTCATCTGAGT +
Preference number: 3 (lower is better)
Translates to: LSVNYQNPESHT*SWWKQGQSHLS
Trigger: ACTCAGATGACTTTGACCCTGCTTCCACCAAGAGCAAGTATGACTCTCTGGATTTTGATAGTTTACTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR-3UTR CAA 90 bp TTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGAGTGAGGAGCAAAGAAGCAGCTaGATATGTCTTTGTAAAGGA +
Preference number: 3 (lower is better)
Translates to: LMQHDLEWACNLTSVLSEEQRSS*ICLCKG
Trigger: TCCTTTACAAAGACATATCAAGCTGCTTCTTTGCTC...CTCACTCAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR-3UTR CAA 90 bp ATTTTCAAGAGCAGCAAAAGCATCACAGGTATAACGGTAGGTAATGAAACCATAGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCC +
Preference number: 3 (lower is better)
Translates to: IFKSSKSITGITVGNETIVRSIV*FSNGEP
Trigger: GGGTTCCCCATTTGAGAACAAGACTATTGAACGCAC...TATGGTTTCATTACCTACCGTTATACCTGTGATGCTTTTGCTGCTCTTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR TCA 72 bp GTTACTGAATTCCATTCCAGGGACTCCACACTCAGATaGAATCCTGATGATCAAAATGGAGGTTTTTCTGAA +
Preference number: 3 (lower is better)
Translates to: VTEFHSRDSTLR*NPDDQNGGFSE
Trigger: TTCAGAAAAACCTCCATTTTGATCATCAGGATTTCATCTGAGTGTGGAGTCCCTGGAATGGAATTCAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CCA 72 bp ACAGCCATCAAGAAAGGACACATAATCATTACCTACTaGAAGCTCACATCTAAAGGCATGAAAAGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: TAIKKGHIIITY*KLTSKGMKRFP
Trigger: AGGAAACCTTTTCATGCCTTTAGATGTGAGCTTCCAGTAGGTAATGATTATGTGTCCTTTCTTGATGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 72 bp AGGTCATCTATAGATCAGGTCTTAGACTACAGTGATTaGAGTTCTCATTACAGCCATCAAGAAAGGACACAT +
Preference number: 3 (lower is better)
Translates to: RSSIDQVLDYSD*SSHYSHQERTH
Trigger: ATGTGTCCTTTCTTGATGGCTGTAATGAGAACTTCAATCACTGTAGTCTAAGACCTGATCTATAGATGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CCA 72 bp GAGCAAAGAAGCAGCTTGATATGTCTTTGTAAAGGATaGCTGTCACCCAAATTCATGGGTTCTCTATTTTTA +
Preference number: 3 (lower is better)
Translates to: EQRSSLICLCKG*LSPKFMGSLFL
Trigger: TAAAAATAGAGAACCCATGAATTTGGGTGACAGCCATCCTTTACAAAGACATATCAAGCTGCTTCTTTGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR-3UTR CAA 90 bp GTTGTGATAAAGAAAACTAGCCGATATGTCATCCTTCGTTTAATTCACTTGCCAATGAGGTACCATTTATaGCTCATTCTTTCTGTGGGA +
Preference number: 3 (lower is better)
Translates to: VVIKKTSRYVILRLIHLPMRYHL*LILSVG
Trigger: TCCCACAGAAAGAATGAGCAATAAATGGTACCTCAT...TGGCAAGTGAATTAAACGAAGGATGACATATCGGCTAGTTTTCTTTATCACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR TCA 72 bp CTTAACTACATCAGAGAATGTAGCAATTACACTATCTaGACACATCTCAGAGAGTTCTACCCAACTCTCATT +
Preference number: 3 (lower is better)
Translates to: LNYIRECSNYTI*THLREFYPTLI
Trigger: AATGAGAGTTGGGTAGAACTCTCTGAGATGTGTTCAGATAGTGTAATTGCTACATTCTCTGATGTAGTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 72 bp CAATTTAGAAACTTGAATACACACTCCAAATGTTACTaGATTCCATTCCAGGGACTCCACACTCAGATGAAA +
Preference number: 3 (lower is better)
Translates to: QFRNLNTHSKCY*IPFQGLHTQMK
Trigger: TTTCATCTGAGTGTGGAGTCCCTGGAATGGAATTCAGTAACATTTGGAGTGTGTATTCAAGTTTCTAAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CCA 72 bp ATTTGCAGTGGAAGATCAACATTTTGGACATTTACATaGGTGTCAGGATTAAGGATGAACTACAGAAACTTC +
Preference number: 3 (lower is better)
Translates to: ICSGRSTFWTFT*VSGLRMNYRNF
Trigger: GAAGTTTCTGTAGTTCATCCTTAATCCTGACACCCATGTAAATGTCCAAAATGTTGATCTTCCACTGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR-3UTR CAA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATGTTATGAGAGAAAGCTaGCTTCAAGTTGATTCTGCA +
Preference number: 3 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHVMRES*LQVDSA
Trigger: TGCAGAATCAACTTGAAGCAAGCTTTCTCTCATAAC...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 72 bp TGGTTTCTTCAGGATTGTCATATAATCATTACGTTATaGGAGAAAGCTTGCTTCAAGTTGATTCTGCACTTT +
Preference number: 3 (lower is better)
Translates to: WFLQDCHIIITL*EKACFKLILHF
Trigger: AAAGTGCAGAATCAACTTGAAGCAAGCTTTCTCTCATAACGTAATGATTATATGACAATCCTGAAGAAACCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR TCA 72 bp GAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTaGAGTCCATTGAGGAAAACTATCTTCATGGTAACA +
Preference number: 3 (lower is better)
Translates to: EDTKAPLILDAI*SPLRKTIFMVT
Trigger: TGTTACCATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CCA 72 bp GAGGAGACATCTTTATTTTCTAGTTGTCTAGAGTCTTaGAGCTCCTGTGATATATTAATGAGTATTTCTGTT +
Preference number: 3 (lower is better)
Translates to: EETSLFSSCLES*SSCDILMSISV
Trigger: AACAGAAATACTCATTAATATATCACAGGAGCTCCAAGACTCTAGACAACTAGAAAATAAAGATGTCTCCTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp GGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACGTAGCTGTCATACCTaGGCCGACGGCTGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLPLRILVRCPQSSHVPTRSCHT*ADGCRA
Trigger: CGCCCTACAGCCGTCGGCCCAGGTATGACAGCTACG...TGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTGCCCTTGCGCATTCTaGTCAGGTGCCCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPCPCAF*SGAPSP
Trigger: AGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCA...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGACGCCATCCAGCTCCTaGATGACGCCAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVTPSSS*MTPVKL
Trigger: AAGCTTGACTGGCGTCATTCAGGAGCTGGATGGCGT...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR GCA 90 bp CAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGACCTGGGGTGGAGGGGTaGCGTCAGGCATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLGLLRPFLGGVIALCTRPGVEG*RQAWRK
Trigger: CTTCCTCCATGCCTGACGGCACCCCTCCACCCCAGG...TCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCAGGCTCTTCTGCCTCCTaGGGTGGAGGGGTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPGSSAS*GGGVPS
Trigger: TGACGGCACCCCTCCACCCCAGGAGGCAGAAGAGCC...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TGTGCTGCAAGGAGAGACCTGCTTGCTTGCCTCCAAAGTCTCTCTCAGGTAGCACGTAGCTGTCATACCTaGGCCGACGGCTGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: CAARRDLLACLQSLSQVARSCHT*ADGCRA
Trigger: CGCCCTACAGCCGTCGGCCCAGGTATGACAGCTACG...TGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTGGACGCGCTGTCCCATaGGGTATTCGCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCGRAVP*GIRHPS
Trigger: AGAGGGATGGCGAATACCTCATGGGACAGCGCGTCC...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTCTGGGCAAAGAGGCTaGTCTTCACCAACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPSGQRG*SSPTRA
Trigger: TGCTCTGGTTGGTGAAGACCAGCCTCTTTGCCCAGA...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp CTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGATTCTGCCTCCTGGGGTaGAGGGGTGCCGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LGLLRPFLGGVIALCTRRFCLLG*RGAVRH
Trigger: ATGCCTGACGGCACCCCTCCACCCCAGGAGGCAGAA...TCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAACGTAGCTGTCATACCTaGGCCGACGGCTGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKERSCHT*ADGCRA
Trigger: CGCCCTACAGCCGTCGGCCCAGGTATGACAGCTACG...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCGCCTCTCCCTTTGCTTaGCCCTCTCAGACTCTCGCT +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTASPFA*PSQTLA
Trigger: AGCGAGAGTCTGAGAGGGCCAAGCAAAGGGAGAGGC...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCTCCACCAGTGAGGACTaGGGACTTGCTGAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLSTSED*GLAELC
Trigger: GCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGA...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCAGCAATGACCAAACATaGACGCTGGCTACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPSNDQT*TLATAV
Trigger: CACAGCTGTAGCCAGCGTTCATGTTTGGTCATTGCT...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR GCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCCCAGAGAGTCATACTTaGTCTTGGTGGAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPPESHT*SWWKQG
Trigger: ACCCTGCTTCCACCAAGAGCAAGTATGACTCTCTGG...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCACGCATTCTGGTCAGGTaGCCCCAGTCCTCACATGTA +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSRILVR*PQSSHV
Trigger: TACATGTGAGGACTGGGGGCACCTGACCAGAATGCG...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCGGCTCTTCTGCCTCCTaGGGTGGAGGGGTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: FLVELLPCVPEDSLYLGFGSSAS*GGGVPS
Trigger: TGACGGCACCCCTCCACCCCAGGAGGCAGAAGAGCC...GAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TCATGGTCACCAAACAGCCGCAGACTGGGCCGCTTGGTCTTCCTTTCCTCGTGTGCTCCGGCCCTTTCTTaGTGGAGTTATTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SWSPNSRRLGRLVFLSSCAPALS*WSYCLV
Trigger: CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC...ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTGGTGACCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATCAAACAGCCGCAGACTaGGCCGCTTGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHQTAAD*AAWSSF
Trigger: AAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTG...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR TCA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGAACTCCAATCCACAGTaGCACAGAGCACACACTCAT +
Preference number: 4 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVNSNPQ*HRAHTH
Trigger: ATGAGTGTGTGCTCTGTGTCACTGTGGATTGGAGTT...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp AGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCACGCCATCCAGCTCCTaGATGACGCCAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: RTEDLLSCAYNSDCSGPFTPSSS*MTPVKL
Trigger: AAGCTTGACTGGCGTCATTCAGGAGCTGGATGGCGT...GAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCTTGGGGTCATTTGGTaGCTCTGGGGTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNLGVIW*LWGQRK
Trigger: CTTCCTCTGACCCCAGAGTCACCAAATGACCCCAAG...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TGTGCTGCAAGGAGAGACCTGCTTGCTTGCCTCCAAAGTCTCTCTCAGGTAGCAGTACCTGGGCTTCTTTaGTGGTGGTGGCACCACAGT +
Preference number: 4 (lower is better)
Translates to: CAARRDLLACLQSLSQVAVPGLL*WWWHHS
Trigger: ACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTAC...TGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGGACTGAGGACTTGCTaGGTTGTGCATACAACTCGG +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSGLRTC*VVHTTR
Trigger: CCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCC...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR TCA 90 bp ACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTCCACCAGTGAGGACTaGGGACTTGCTGAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TWASLMVVAPQSCKRTSASTSED*GLAELC
Trigger: GCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGA...AGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp CCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGGGACGCGCTGTCCCATaGGGTATTCGCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: PFLGGVIALCTRRLTVPGGRAVP*GIRHPS
Trigger: AGAGGGATGGCGAATACCTCATGGGACAGCGCGTCC...CCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCGGAACTGCTGCCATTTaGAATGGTTTGCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLGTAAI*NGLPLR
Trigger: GCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCC...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp AGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCACTCAGAGTCCTGGTTaGACATGTCCCACGCCATCC +
Preference number: 4 (lower is better)
Translates to: RTEDLLSCAYNSDCSGPFTQSPG*TCPTPS
Trigger: GGATGGCGTGGGACATGTGCAACCAGGACTCTGAGT...GAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR GCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCGCATACAACTCGGATTaGTCCGGCCCTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTAYNSD*SGPFLV
Trigger: CACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGC...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATCTGCAAGGAGAGACCTaGTTGCTTGCCTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHLQGET*LLASKV
Trigger: GACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAG...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CCA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGAAGTTCAGGAAGATCTaGGCAAAGAGGCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVKFRKI*AKRLVF
Trigger: GAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTT...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCACTTTATGAGGAGGAGTaGTGGGTGGAGTTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSLYEEE*WVELGL
Trigger: CAGGCCTAACTCCACCCACCACTCCTCCTCATAAAG...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGGCAGACTGGGCCGCTTaGTCTTCCTTTCCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVADWAA*SSFPRV
Trigger: GACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGC...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCAGCAGACTGGGCCGCTTaGTCTTCCTTTCCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPADWAA*SSFPRV
Trigger: GACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGC...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp ACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTCAAACAGCCGCAGACTaGGCCGCTTGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TWASLMVVAPQSCKRTSAQTAAD*AAWSSF
Trigger: AAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTG...AGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTCGGCTCGGATTTCCTaGTCTTGGAGCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPSARIS*SWSCFL
Trigger: AAGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGA...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCTGTCAGCGCATCAAATaGGGGCAATCCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTCQRIK*GQSVFI
Trigger: GATGAAGACGGATTGCCCTCATTTGATGCGCTGACA...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTTCTGTGGGTTTGGTGTaGGGAGGGTCATCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCSVGLV*GGSSFV
Trigger: CACAAACGATGACCCTCCTCACACCAAACCCACAGA...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp ATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACTTGGGGTCATTTGGTaGCTCTGGGGTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILVRCPQSSHVPTHTSPKLGVIW*LWGQRK
Trigger: CTTCCTCTGACCCCAGAGTCACCAAATGACCCCAAG...TTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TGTGCTGCAAGGAGAGACCTGCTTGCTTGCCTCCAAAGTCTCTCTCAGGTAGCATCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CAARRDLLACLQSLSQVASWLAL*GGVVGG
Trigger: TCCACCCACCACTCCTCCTCATAAAGCCAACCAAGA...TGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCCAGGTAGCACTGGTCTaGATCTGTGGAAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPQVALV*ICGRTN
Trigger: ATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTG...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCATCGAGAAAAGGACCTTaGACGAGAGCGCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSSRKGP*TRAHPL
Trigger: CAAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGA...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR TCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCGTGTCTGTAGTGGCTTaGCTCATAGTAATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPVSVVA*LIVIAG
Trigger: TCCTGCTATTACTATGAGTCAAGCCACTACAGACAC...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCCTGCGCAAGCTTCTCTaGGCTTCTTTCAGTAAACTA +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPLRKLL*ASFSKL
Trigger: TAGTTTACTGAAAGAAGCTCAGAGAAGCTTGCGCAG...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAAACAGAGTACAAAGGCTaGTGCCCAGACATCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKETEYKG*CPDISG
Trigger: GCCGCTGATGTCTGGGCATCAGCCTTTGTACTCTGT...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATGCATTGGCCTGGGGGTaGAATCCATCTTACAAGATC +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHALAWG*NPSYKI
Trigger: GATCTTGTAAGATGGATTTCACCCCCAGGCCAATGC...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCGCACAGCTTACATTTTaGTGGGCTACCCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTAQLTF*WATHSV
Trigger: GACACTGTGGGTAGCCCATCAAAATGTAAGCTGTGC...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAGTACTTACCACGGCATaGAGGCAATGGCCCACGGTC +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGVLTTA*RQWPTV
Trigger: GACCGTGGGCCATTGCCTTCATGCCGTGGTAAGTAC...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGCGTGCCAACCAACACTaGAAGGAAAGATTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVRANQH*KERFCS
Trigger: AGAACAGAATCTTTCCTTTCAGTGTTGGTTGGCACG...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR GCA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGACTCAGAGTCCTGGTTaGACATGTCCCACGCCATCC +
Preference number: 4 (lower is better)
Translates to: ASLMVVAPQSCKRTSALETQSPG*TCPTPS
Trigger: GGATGGCGTGGGACATGTGCAACCAGGACTCTGAGT...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR GCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACACCTGGGGTGGAGGGGTaGCGTCAGGCATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTPGVEG*RQAWRK
Trigger: CTTCCTCCATGCCTGACGGCACCCCTCCACCCCAGG...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp GGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTCCTTCGTGGCATACAACTCGGATTaGTCCGGCCCTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GWLYEEEWWVELGPNSFVAYNSD*SGPFLV
Trigger: CACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGC...CACGAAGGAATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR GCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTGAAATGGTTTGCCCTTaGGCATTCTGGTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCEMVCP*AFWSGA
Trigger: GGCACCTGACCAGAATGCGCAAGGGCAAACCATTTC...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CTCTGTCATCCTCAGCTAGGGAACATGTTACCTGCGCAAGCTTCTCTGAGCTTCACAGACTCAGAGTCCTaGTTGCACATGTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: LCHPQLGNMLPAQASLSFTDSES*LHMSHA
Trigger: GGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGT...GAAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCTAGCTGAGGATGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAGGCTCTTCTGCCTCCTaGGGTGGAGGGGTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTGSSAS*GGGVPS
Trigger: TGACGGCACCCCTCCACCCCAGGAGGCAGAAGAGCC...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TCATGGTCACCAAACAGCCGCAGACTGGGCCGCTTGGTCTTCCTTTCCTCGTGTAACTTAGCTGAGTGTTaGCTGGTGCCAGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SWSPNSRRLGRLVFLSSCNLAEC*LVPVRA
Trigger: AGCTCTTACTGGCACCAGCCAACACTCAGCTAAGTT...ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTGGTGACCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp TCATGGTCACCAAACAGCCGCAGACTGGGCCGCTTGGTCTTCCTTTCCTCGTGTTCGGCTCGGATTTCCTaGTCTTGGAGCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SWSPNSRRLGRLVFLSSCSARIS*SWSCFL
Trigger: AAGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGA...ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTGGTGACCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp GGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACATGCTGCCATTTGAAATaGTTTGCCCTTGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: GLPLRILVRCPQSSHVPTCCHLK*FALAHS
Trigger: AGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCA...TGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCTCAAGAACAACACCATaGTCACGTCAGAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLSRTTP*SRQRPC
Trigger: GCATGGCCTCTGACGTGACCATGGTGTTGTTCTTGA...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CAA 72 bp AACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATaGCCTTGTGTACCAGAAGACTCACTGTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: NSDCSGPFLVEL*PCVPEDSLYLG
Trigger: GCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CAA 72 bp GCTGTTTTCTTGTGCTGCAAGGAGAGACCTGCTTGCTaGCCTCCAAAGTCTCTCTCAGGTAGCACTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AVFLCCKERPAC*PPKSLSGSTGL
Trigger: CAGACCAGTGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACAAGAAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 72 bp TTCACCGGTCTTGTCTGCTTCGTCGTCAAAAACAGCTaGACTGGGATGACCGAAGTGCTTGTTCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: FTGLVCFVVKNS*TGMTEVLVQLG
Trigger: GCCGAGCTGAACAAGCACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 72 bp AGCTGTCATACCTGGGCCGACGGCTGTAGGGCGATCTaGAACGTGATCTCACATACAAGGGAGAATTTCGGT +
Preference number: 4 (lower is better)
Translates to: SCHTWADGCRAI*NVISHTRENFG
Trigger: ACCGAAATTCTCCCTTGTATGTGAGATCACGTTCAAGATCGCCCTACAGCCGTCGGCCCAGGTATGACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp TTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGACGCCATCCAGCTCCTaGATGACGCCAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LCIQLGLLRPFLGGVIALTPSSS*MTPVKL
Trigger: AAGCTTGACTGGCGTCATTCAGGAGCTGGATGGCGT...CAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp GCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTTCTGTGGGTTTGGTGTaGGGAGGGTCATCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: APALSWWSYCLVYQKTHCSVGLV*GGSSFV
Trigger: CACAAACGATGACCCTCCTCACACCAAACCCACAGA...ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVSWLAL*GGVVGG
Trigger: TCCACCCACCACTCCTCCTCATAAAGCCAACCAAGA...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCATCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPSWLAL*GGVVGG
Trigger: TCCACCCACCACTCCTCCTCATAAAGCCAACCAAGA...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGGTACCTGGGCTTCTTTaGTGGTGGTGGCACCACAGT +
Preference number: 4 (lower is better)
Translates to: LCIQLGLLRPFLGGVIALVPGLL*WWWHHS
Trigger: ACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTAC...CAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGGGACTGAGGACTTGCTaGGTTGTGCATACAACTCGG +
Preference number: 4 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVGLRTC*VVHTTR
Trigger: CCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCC...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp GCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTGGACTGAGGACTTGCTaGGTTGTGCATACAACTCGG +
Preference number: 4 (lower is better)
Translates to: APALSWWSYCLVYQKTHCGLRTC*VVHTTR
Trigger: CCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCC...ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGATCCACCAGTGAGGACTaGGGACTTGCTGAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGSTSED*GLAELC
Trigger: GCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGA...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCAGGAACTGCTGCCATTTaGAATGGTTTGCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPGTAAI*NGLPLR
Trigger: GCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCC...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp GGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACAACTTACACTCCAACCTaGCAATTGTCATGCATCCTA +
Preference number: 4 (lower is better)
Translates to: GLPLRILVRCPQSSHVPTTYTPT*QLSCIL
Trigger: TAGGATGCATGACAATTGTCAGGTTGGAGTGTAAGT...TGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp GGGAAAGTAGAACTAACCACAACCTTCAGTGTTCCCTCCACCTTGTTCTGTCTCCCACCAGAGAGGCATTaGCTCCTATGCCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: GKVELTTTFSVPSTLFCLPPERH*LLCHLP
Trigger: GGGGAGATGGCATAGGAGTCAATGCCTCTCTGGTGG...GAGACAGAACAAGGTGGAGGGAACACTGAAGGTTGTGGTTAGTTCTACTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR GCA 90 bp GAATACACACTCCAAATGTTACTGAATTCCATTCCAGGGACTCCACACTCAGATCCTGGGGTGGAGGGGTaGCGTCAGGCATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EYTLQMLLNSIPGTPHSDPGVEG*RQAWRK
Trigger: CTTCCTCCATGCCTGACGGCACCCCTCCACCCCAGG...ATCTGAGTGTGGAGTCCCTGGAATGGAATTCAGTAACATTTGGAGTGTGTATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCTGTAAGTGTTGTGACTaGGACTGTGTGTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTCKCCD*DCVWDF
Trigger: GAAGTCCCACACACAGTCGCAGTCACAACACTTACA...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGGACTTGCTGAGTTGTaGATACAACTCGGATTGCTC +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSGLAEL*IQLGLL
Trigger: GAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCC...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR GCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGAACAAATCTGCCCCTaGCAATCAGAGGAGACATCT +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSEQICP*QSEETS
Trigger: AGATGTCTCCTCTGATTGGCAGGGGCAGATTTGTTC...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR GCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATGAACAAATCTGCCCCTaGCAATCAGAGGAGACATCT +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHEQICP*QSEETS
Trigger: AGATGTCTCCTCTGATTGGCAGGGGCAGATTTGTTC...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR GCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTAGAGACCTGCTTGCTTaGCTCCAAAGTCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCRDLLA*LQSLSQ
Trigger: CTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCT...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACTGCAAGGAGAGACCTaGTTGCTTGCCTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ILVRCPQSSHVPTHTSPKLQGET*LLASKV
Trigger: GACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAG...TTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCTTCACCGGTCTTGTCTaGTTCGTCGTCAAAAACAGC +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTFTGLV*FVVKNS
Trigger: GCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAA...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCTTCACCGGTCTTGTCTaGTTCGTCGTCAAAAACAGC +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLFTGLV*FVVKNS
Trigger: GCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAA...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCCTGAAACATAAATCTTaGTACCAGCCGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLLKHKS*YQPVQG
Trigger: TCCCTGGACCGGCTGGTAGCAAGATTTATGTTTCAG...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CCA 90 bp ATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCACAGACTCAGAGTCCTaGTTGCACATGTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: IQLGLLRPFLGGVIALCTTDSES*LHMSHA
Trigger: GGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGT...GGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATTGTTTCTGTTCTCTGTaGGTTTGGTGTGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHCFCSL*VWCEEG
Trigger: ACCCTCCTCACACCAAACCCACAGAGAACAGAAACA...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCTGTTTCTGTTCTCTGTaGGTTTGGTGTGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLCFCSL*VWCEEG
Trigger: ACCCTCCTCACACCAAACCCACAGAGAACAGAAACA...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACGACTGCGACTGTGTGTaGGACTTCTTTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNDCDCV*DFFLEV
Trigger: CACCTCCAAAAAGAAGTCCCACACACAGTCGCAGTC...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAATGGGGAACCCTTaGGGTCATTTGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNQMGNP*GHLVTL
Trigger: CAGAGTCACCAAATGACCCCAAGGGTTCCCCATTTG...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAACTTTATGAGGAGGAGTaGTGGGTGGAGTTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKELYEEE*WVELGL
Trigger: CAGGCCTAACTCCACCCACCACTCCTCCTCATAAAG...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TCATGGTCACCAAACAGCCGCAGACTGGGCCGCTTGGTCTTCCTTTCCTCGTGTAGAGGACTTCAGCTTTaGAGAAGCCCTAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SWSPNSRRLGRLVFLSSCRGLQL*RSPKRV
Trigger: AACCCTTTTAGGGCTTCTCCAAAGCTGAAGTCCTCT...ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTGGTGACCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCCGGCCCTTTCTTGGTaGAGTTATTGCCTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNPALSW*SYCLVY
Trigger: GTACACAAGGCAATAACTCCACCAAGAAAGGGCCGG...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAAGCTCCGGCCCTTTCTTaGTGGAGTTATTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKEAPALS*WSYCLV
Trigger: CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCGCAGACTGGGCCGCTTaGTCTTCCTTTCCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: FLVELLPCVPEDSLYLGFADWAA*SSFPRV
Trigger: GACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGC...GAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCAAACAGCCGCAGACTaGGCCGCTTGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SGPFLVELLPCVPEDSLYQTAAD*AAWSSF
Trigger: AAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTG...GTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCTCTCCCTTTGCTTaGCCCTCTCAGACTCTCGCT +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGASPFA*PSQTLA
Trigger: AGCGAGAGTCTGAGAGGGCCAAGCAAAGGGAGAGGC...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCATTGTGGTCAGATATTTaGGAAGCTCCGAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPLWSDI*EAPSRD
Trigger: GTCCCTGCTCGGAGCTTCTCAAATATCTGACCACAA...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTCTGTGGGTTTGGTGTaGGGAGGGTCATCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LCIQLGLLRPFLGGVIALSVGLV*GGSSFV
Trigger: CACAAACGATGACCCTCCTCACACCAAACCCACAGA...CAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGTACCTGGGCTTCTTTaGTGGTGGTGGCACCACAGT +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGVPGLL*WWWHHS
Trigger: ACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTAC...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTCCACCAGTGAGGACTaGGGACTTGCTGAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: FLVELLPCVPEDSLYLGFSTSED*GLAELC
Trigger: GCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGA...GAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACGTAATAGCAGGATCTTaGAGAGGATCTACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNVIAGS*RGSTAW
Trigger: CCAGGCAGTAGATCCTCTTCAAGATCCTGCTATTAC...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGACCCTCTCTGCTGCTTTaGATGTTGACAGCCCAACTG +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGPSLLL*MLTAQL
Trigger: CAGTTGGGCTGTCAACATTCAAAGCAGCAGAGAGGG...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp GGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACATTTCCTTTTATCAACTaGCCCAAACATCATACCCCA +
Preference number: 4 (lower is better)
Translates to: GLPLRILVRCPQSSHVPTFPFIN*PKHHTP
Trigger: TGGGGTATGATGTTTGGGTCAGTTGATAAAAGGAAA...TGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATGGAGGCTGTTACCTCTaGGCCTTTTGCTTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHGGCYL*AFCFVF
Trigger: AAAAACAAAGCAAAAGGCTCAGAGGTAACAGCCTCC...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR TCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGACAAGGTTGCCCACAGTaGCCCAGAAAGGCCAATATG +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGQGCPQ*PRKANM
Trigger: CATATTGGCCTTTCTGGGTCACTGTGGGCAACCTTG...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR GCA 90 bp CAAAAGTACAGCTCAAAGTCAGTTTCGTTTGACCTGCGCAAAGTGTATCCATTTCCTGGGGTGGAGGGGTaGCGTCAGGCATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QKYSSKSVSFDLRKVYPFPGVEG*RQAWRK
Trigger: CTTCCTCCATGCCTGACGGCACCCCTCCACCCCAGG...AAATGGATACACTTTGCGCAGGTCAAACGAAACTGACTTTGAGCTGTACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCAGGTGCATTTGTCTCTaGTGCTGTTTCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLRCICL*CCFCSL
Trigger: CAGAGAACAGAAACAGCAGCAGAGACAAATGCACCT...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACTGTAAGTGTTGTGACTaGGACTGTGTGTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNCKCCD*DCVWDF
Trigger: GAAGTCCCACACACAGTCGCAGTCACAACACTTACA...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAGCATACAACTCGGATTaGTCCGGCCCTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGAYNSD*SGPFLV
Trigger: CACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGC...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTGGACTTGCTGAGTTGTaGATACAACTCGGATTGCTC +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCGLAEL*IQLGLL
Trigger: GAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCC...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGGTGGAAGAACAAATCTaGCCCTGCCAATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVVEEQI*PCQSEE
Trigger: CTCCTCTGATTGGCAGGGGCAGATTTGTTCTTCCAC...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp ATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAAAAGGAGAGACCTGCTTaGTTGCCTCCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ILVRCPQSSHVPTHTSPKKERPA*LPPKSL
Trigger: GAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTT...TTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAGAGAATTTCGGTGCGTaGGGTGTCTGTAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGENFGA*GVCSGL
Trigger: CAAGCCACTACAGACACCGCACGCACCGAAATTCTC...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTGAGAATTTCGGTGCGTaGGGTGTCTGTAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ISHTRENFGACGVCSGLTENFGA*GVCSGL
Trigger: CAAGCCACTACAGACACCGCACGCACCGAAATTCTC...AGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTAGGGAACATGTTACCTaGGCAAGCTTCTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCREHVT*ASFSEL
Trigger: AAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCT...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCTCCTCCTTCAAACAATaGACAAAGGCAACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLSSFKQ*TKATEG
Trigger: TCCCTCTGTTGCCTTTGTGCATTGTTTGAAGGAGGA...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CCA 90 bp CACGGCATGAAGGCAATGGCCCACGGTCTTCTAAAAATCCTACAGATCTATGCTACAGACTCAGAGTCCTaGTTGCACATGTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: HGMKAMAHGLLKILQIYATDSES*LHMSHA
Trigger: GGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGT...AGCATAGATCTGTAGGATTTTTAGAAGACCGTGGGCCATTGCCTTCATGCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp GGGAAAGTAGAACTAACCACAACCTTCAGTGTTCCCTCCACCTTGTTCTGTCTCACAGACTCAGAGTCCTaGTTGCACATGTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: GKVELTTTFSVPSTLFCLTDSES*LHMSHA
Trigger: GGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGT...GAGACAGAACAAGGTGGAGGGAACACTGAAGGTTGTGGTTAGTTCTACTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTTCTGCCTCCTGGGGTaGAGGGGTGCCGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHFCLLG*RGAVRH
Trigger: ATGCCTGACGGCACCCCTCCACCCCAGGAGGCAGAA...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTTGTTTCTGTTCTCTGTaGGTTTGGTGTGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCCFCSL*VWCEEG
Trigger: ACCCTCCTCACACCAAACCCACAGAGAACAGAAACA...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGAGACTGCGACTGTGTGTaGGACTTCTTTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LGLLRPFLGGVIALCTRRDCDCV*DFFLEV
Trigger: CACCTCCAAAAAGAAGTCCCACACACAGTCGCAGTC...TCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp CAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAGACTGCGACTGTGTGTaGGACTTCTTTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QLGLLRPFLGGVIALCTRDCDCV*DFFLEV
Trigger: CACCTCCAAAAAGAAGTCCCACACACAGTCGCAGTC...TCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATCAAATGGGGAACCCTTaGGGTCATTTGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: SCPPVRTEDLLSCAYNSDQMGNP*GHLVTL
Trigger: CAGAGTCACCAAATGACCCCAAGGGTTCCCCATTTG...ATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAAGTCTTGTTCTCAAATaGGGAACCCTTGGGGTCATT +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSSLVLK*GTLGVI
Trigger: AATGACCCCAAGGGTTCCCCATTTGAGAACAAGACT...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCAAGGGTTATCTTGGTTaGCTTTATGAGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLKGYLG*LYEEEW
Trigger: CCACTCCTCCTCATAAAGCCAACCAAGATAACCCTT...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCAAGGGTTATCTTGGTTaGCTTTATGAGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTKGYLG*LYEEEW
Trigger: CCACTCCTCCTCATAAAGCCAACCAAGATAACCCTT...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GACTCACTGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGAAGACTCACTGTACCTaGGCTTCTTTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DSLYLGFFDGGGTTVLQEKTHCT*ASLMVV
Trigger: CACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTT...CTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACAAGACTCACTGTACCTaGGCTTCTTTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNKTHCT*ASLMVV
Trigger: CACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTT...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACGCTCCGGCCCTTTCTTaGTGGAGTTATTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SGPFLVELLPCVPEDSLYAPALS*WSYCLV
Trigger: CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC...GTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTCGGATTTCCTGGTCTTaGAGCTGTTTTCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCRISWS*SCFLVL
Trigger: CAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCG...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATACCTTGATCTTGACCTaGAATATGGTGATCGGGAAC +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHTLILT*NMVIGN
Trigger: GTTCCCGATCACCATATTCCAGGTCAAGATCAAGGT...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CCA 90 bp ACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTTCTCAAATGGGGAACCCTTaGGGTCACTGGAAGATATGG +
Preference number: 4 (lower is better)
Translates to: TEVLVQLGSDFLVLELFSQMGNP*GHWKIW
Trigger: CCATATCTTCCAGTGACCCCAAGGGTTCCCCATTTG...AGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGACAAAAAGGGTGGCATaGCATATATTAAGCACCTAC +
Preference number: 4 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVTKRVA*HILSTY
Trigger: GTAGGTGCTTAATATATGCCATGCCACCCTTTTTGT...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CCA 90 bp TTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACTATGAGGAGGAGTGGTaGGTGGAGTTAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: FLSSCPPVRTEDLLSCAYYEEEW*VELGPN
Trigger: ATTTGGGCCTAACTCCACCCACCACTCCTCCTCATA...GTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CCA 90 bp ATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCCTTTATGAGGAGGAGTaGTGGGTGGAGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: IQLGLLRPFLGGVIALCTLYEEE*WVELGP
Trigger: TGGGCCTAACTCCACCCACCACTCCTCCTCATAAAG...GGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
3UTR CAA 72 bp CTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTaGATGGTGGTGGCACCACAGTCTTGCAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: LVYQKTHCTWAS*MVVAPQSCKRT
Trigger: AGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CAA 72 bp GTGATCGGGAACACGACCTGTGTCGAGAAAAGGACCTaGAACGAGAGCGCATCCTTTGGGGTCTTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VIGNTTCVEKRT*NESASFGVFEK
Trigger: TTTCTCAAAGACCCCAAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGACACAGGTCGTGTTCCCGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp CTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTAACTCCAATCCACAGTaGCACAGAGCACACACTCAT +
Preference number: 4 (lower is better)
Translates to: LAELCIQLGLLRPFLGGVNSNPQ*HRAHTH
Trigger: ATGAGTGTGTGCTCTGTGTCACTGTGGATTGGAGTT...AACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGTGTCTAGTGTCTCTGTaGGGACTGCTAGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: ASLMVVAPQSCKRTSALECLVSL*GLLASL
Trigger: CAAACTTGCTAGCAGTCCTCACAGAGACACTAGACA...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp CCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGTGTCAGCGCATCAAATaGGGGCAATCCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: PFLGGVIALCTRRLTVPGCQRIK*GQSVFI
Trigger: GATGAAGACGGATTGCCCTCATTTGATGCGCTGACA...CCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp ACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTCATGGTTCTGGGTACTaGGACCACTGCATTCATTAT +
Preference number: 4 (lower is better)
Translates to: TWASLMVVAPQSCKRTSAHGSGY*DHCIHY
Trigger: ATAATGAATGCAGTGGTCTCAGTACCCAGAACCATG...AGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCTTGCAGGGTTTGTTCTaGTCCTGTGATTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTLQGLF*SCDCDL
Trigger: CAAATCACAATCACAGGATCAGAACAAACCCTGCAA...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCCGCTTTATTGCTCCATaGATTCTCAGTCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPRFIAP*ILSLNN
Trigger: ATTGTTAAGACTGAGAATTCATGGAGCAATAAAGCG...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCATTGTGGTCAGATATTTaGGAAGCTCCGAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: YNSDCSGPFLVELLPCVPLWSDI*EAPSRD
Trigger: GTCCCTGCTCGGAGCTTCTCAAATATCTGACCACAA...TGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGATTGTGGTCAGATATTTaGGAAGCTCCGAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGLWSDI*EAPSRD
Trigger: GTCCCTGCTCGGAGCTTCTCAAATATCTGACCACAA...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp CACGGCATGAAGGCAATGGCCCACGGTCTTCTAAAAATCCTACAGATCTATGCTTCTTGGTTGGCTTTATaGGGAGGAGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HGMKAMAHGLLKILQIYASWLAL*GGVVGG
Trigger: TCCACCCACCACTCCTCCTCATAAAGCCAACCAAGA...AGCATAGATCTGTAGGATTTTTAGAAGACCGTGGGCCATTGCCTTCATGCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATAGACACATTGAACAATaGATAGGATTGCGTGCCATC +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHRHIEQ*IGLRAI
Trigger: GATGGCACGCAATCCTATTCATTGTTCAATGTGTCT...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR TCA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCAGACACATTGAACAATaGATAGGATTGCGTGCCATC +
Preference number: 4 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLRHIEQ*IGLRAI
Trigger: GATGGCACGCAATCCTATTCATTGTTCAATGTGTCT...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp CCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGTCGAGAAAAGGACCTTaGACGAGAGCGCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: PFLGGVIALCTRRLTVPGSRKGP*TRAHPL
Trigger: CAAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGA...CCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGGTAATAGCAGGATCTTaGAGAGGATCTACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASLMVVAPQSCKRTSALEVIAGS*RGSTAW
Trigger: CCAGGCAGTAGATCCTCTTCAAGATCCTGCTATTAC...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp CCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGGTCACCTTGTTGAGCTaGCATTGCTTTGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: PFLGGVIALCTRRLTVPGVTLLS*HCFAIP
Trigger: GGGAATGGCAAAGCAATGTCAGCTCAACAAGGTGAC...CCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR GCA 90 bp CCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCAGGTGCATTTGTCTCTaGTGCTGTTTCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPVRTEDLLSCAYNSDCSRCICL*CCFCSL
Trigger: CAGAGAACAGAAACAGCAGCAGAGACAAATGCACCT...GGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR GCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATACTTCTTTTTGGAGGTaGATTTGTCTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHTSFWR*ICLCCC
Trigger: ACAGCAGCAGAGACAAATGCACCTCCAAAAAGAAGT...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR GCA 90 bp CTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTGGACTTGCTGAGTTGTaGATACAACTCGGATTGCTC +
Preference number: 4 (lower is better)
Translates to: LAELCIQLGLLRPFLGGVGLAEL*IQLGLL
Trigger: GAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCC...AACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR GCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAGTGGAAGAACAAATCTaGCCCTGCCAATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGVEEQI*PCQSEE
Trigger: CTCCTCTGATTGGCAGGGGCAGATTTGTTCTTCCAC...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTAGAGACCTGCTTGCTTaGCTCCAAAGTCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ISHTRENFGACGVCSGLTRDLLA*LQSLSQ
Trigger: CTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCT...AGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp ATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTAAGGAGAGACCTGCTTaGTTGCCTCCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ISHTRENFGACGVCSGLTKERPA*LPPKSL
Trigger: GAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTT...AGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGTTCACCGGTCTTGTCTaGTTCGTCGTCAAAAACAGC +
Preference number: 4 (lower is better)
Translates to: ASLMVVAPQSCKRTSALEFTGLV*FVVKNS
Trigger: GCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAA...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACATGAATAGGATTGCGTaGCATCCCAAGGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLSSCPPVRTEDLLSCAYMNRIA*HPKGSS
Trigger: TGAGCTACCCTTGGGATGGCACGCAATCCTATTCAT...GTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp GAACACGACCTGTGTCGAGAAAAGGACCTTGAACGAGAGCGCATCCTTTGGGGTTTGAAGAGGATCTACTaGCTGGAGACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: EHDLCREKDLERERILWGLKRIY*LETLIL
Trigger: CAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAA...ACCCCAAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGACACAGGTCGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTCCCGCAGATTTACTGTaGACTCCTCAATTTCACCAA +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCPADLL*TPQFHQ
Trigger: TTGGTGAAATTGAGGAGTGCACAGTAAATCTGCGGG...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTCCATTTGAAATGGTTTaGCCTTGCGCATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCPFEMV*PCAFWS
Trigger: TGACCAGAATGCGCAAGGGCAAACCATTTCAAATGG...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCATCTTCATGGAACTGCTaGCATTTGAAATGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSSSWNC*HLKWFA
Trigger: GGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAACTTTAGCATTCTGGTaGCCGCAGTATCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGTLAFW*PQYPLP
Trigger: TGGGAGAGGATACTGCGGGCACCAGAATGCTAAAGT...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCACGGAAAGCATCATTTTaGTCTTGTTGCACTCAACAG +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSRKASF*SCCTQQ
Trigger: CTGTTGAGTGCAACAAGAGCAAAATGATGCTTTCCG...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGAAGTTCAGGAAGATCTaGGCAAAGAGGCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVKFRKI*AKRLVF
Trigger: GAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTT...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATAAGTTCAGGAAGATCTaGGCAAAGAGGCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SCPPVRTEDLLSCAYNSDKFRKI*AKRLVF
Trigger: GAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTT...ATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp CTGTCATCAAACAGGCCATCCATGGCTAGTCCTGAATTTATAAACATAGGTAGTTTCTGCCTCCTGGGGTaGAGGGGTGCCGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSSNRPSMASPEFINIGSFCLLG*RGAVRH
Trigger: ATGCCTGACGGCACCCCTCCACCCCAGGAGGCAGAA...ACTACCTATGTTTATAAATTCAGGACTAGCCATGGATGGCCTGTTTGATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTCTGCCTCCTGGGGTaGAGGGGTGCCGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLFCLLG*RGAVRH
Trigger: ATGCCTGACGGCACCCCTCCACCCCAGGAGGCAGAA...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGAACTTAGCTGAGTGTTaGCTGGTGCCAGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ASLMVVAPQSCKRTSALENLAEC*LVPVRA
Trigger: AGCTCTTACTGGCACCAGCCAACACTCAGCTAAGTT...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp ACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTAGAGGACTTCAGCTTTaGAGAAGCCCTAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TWASLMVVAPQSCKRTSARGLQL*RSPKRV
Trigger: AACCCTTTTAGGGCTTCTCCAAAGCTGAAGTCCTCT...AGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTAGAGGACTTCAGCTTTaGAGAAGCCCTAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCRGLQL*RSPKRV
Trigger: AACCCTTTTAGGGCTTCTCCAAAGCTGAAGTCCTCT...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GACTCACTGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGACTGGTCTGAATCTGTaGAAGAACAAATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: DSLYLGFFDGGGTTVLQETGLNL*KNKSAP
Trigger: AGGGGCAGATTTGTTCTTCCACAGATTCAGACCAGT...CTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp TTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACCGGATTTCCTGGTCTTaGAGCTGTTTTCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FLSSCPPVRTEDLLSCAYRISWS*SCFLVL
Trigger: CAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCG...GTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp ATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAATCGGCTCGGATTTCCTaGTCTTGGAGCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILVRCPQSSHVPTHTSPKSARIS*SWSCFL
Trigger: AAGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGA...TTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTTGCCCTTGCGCATTCTaGTCAGGTGCCCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLICPCAF*SGAPSP
Trigger: AGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCA...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CAA 72 bp TACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTaGCAAGAGGACTTCAGCTTTGGAGAAGCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: YLGFFDGGGTTV*QEDFSFGEALK
Trigger: TTTTAGGGCTTCTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CAA 72 bp AGCAGGATCTTGAAGAGGATCTACTGCCTGGAGACCTaGATCTTGACCTGGAATATGGTGATCGGGAACACG +
Preference number: 4 (lower is better)
Translates to: SRILKRIYCLET*ILTWNMVIGNT
Trigger: CGTGTTCCCGATCACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp TTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGAACTCCAATCCACAGTaGCACAGAGCACACACTCAT +
Preference number: 4 (lower is better)
Translates to: LCIQLGLLRPFLGGVIALNSNPQ*HRAHTH
Trigger: ATGAGTGTGTGCTCTGTGTCACTGTGGATTGGAGTT...CAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp TTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTCTAGTGTCTCTGTaGGGACTGCTAGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LCIQLGLLRPFLGGVIALCLVSL*GLLASL
Trigger: CAAACTTGCTAGCAGTCCTCACAGAGACACTAGACA...CAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp TTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTGTCAGCGCATCAAATaGGGGCAATCCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: FLVELLPCVPEDSLYLGFCQRIK*GQSVFI
Trigger: GATGAAGACGGATTGCCCTCATTTGATGCGCTGACA...GAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGGTGTCTGTAGTGGCTTaGCTCATAGTAATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVVSVVA*LIVIAG
Trigger: TCCTGCTATTACTATGAGTCAAGCCACTACAGACAC...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAAGCTGAATTTCCCAAATaGAGCACTTACACTCCAACC +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKEAEFPK*STYTPT
Trigger: GGTTGGAGTGTAAGTGCTTCATTTGGGAAATTCAGC...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCGACTCCACACTCAGATaGAATCCTGATGATCAAAAT +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTDSTLR*NPDDQN
Trigger: ATTTTGATCATCAGGATTTCATCTGAGTGTGGAGTC...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGTAACGCAGAACCTGTaGACAAGTTCTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSVTQNL*TSSFIS
Trigger: TGAAATGAAAGAACTTGTTCACAGGTTCTGCGTTAC...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp CCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGAAACCGTCACCTTGTTaGGCTGACATTGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PFLGGVIALCTRRLTVPGKPSPC*ADIALP
Trigger: TGGCAAAGCAATGTCAGCTCAACAAGGTGACGGTTT...CCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR GCA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATCTCAGTCTTAACAATTaGAGGGTTTGTTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHLSLNN*RVCSDP
Trigger: AGGATCAGAACAAACCCTGCAATTGTTAAGACTGAG...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR GCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACTTCTTTTTGGAGGTaGATTTGTCTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCTSFWR*ICLCCC
Trigger: ACAGCAGCAGAGACAAATGCACCTCCAAAAAGAAGT...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTCCTGTAAGTGTTGTGACTaGGACTGTGTGTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: YLGWLYEEEWWVELGPNSCKCCD*DCVWDF
Trigger: GAAGTCCCACACACAGTCGCAGTCACAACACTTACA...GGAATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR GCA 90 bp ATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTGGACTTGCTGAGTTGTaGATACAACTCGGATTGCTC +
Preference number: 4 (lower is better)
Translates to: ISHTRENFGACGVCSGLTGLAEL*IQLGLL
Trigger: GAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCC...AGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGAAGGAGAGACCTGCTTaGTTGCCTCCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQKERPA*LPPKSL
Trigger: GAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTT...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAACGGCGCTCTTCAATTaGCTTCTGCCTCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTTALFN*LLPLPL
Trigger: GAGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGT...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGAGGGAACATGTTACCTaGGCAAGCTTCTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LCIQLGLLRPFLGGVIALREHVT*ASFSEL
Trigger: AAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCT...CAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp ATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCATTTGAAATGGTTTaGCCTTGCGCATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ILVRCPQSSHVPTHTSPKPFEMV*PCAFWS
Trigger: TGACCAGAATGCGCAAGGGCAAACCATTTCAAATGG...TTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCATACAGACTGCTGTGCTaGAAAAGTAGTCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSYRLLC*KSSPLF
Trigger: GAATAAAGGACTACTTTTGCAGCACAGCAGTCTGTA...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CCA 90 bp TCATGGTCACCAAACAGCCGCAGACTGGGCCGCTTGGTCTTCCTTTCCTCGTGTGATATTATTTCTGATTaGTCACTGCACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: SWSPNSRRLGRLVFLSSCDIISD*SLHHLS
Trigger: ACTCAAGTGGTGCAGTGACCAATCAGAAATAATATC...ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTGGTGACCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAAACTTAGCTGAGTGTTaGCTGGTGCCAGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGNLAEC*LVPVRA
Trigger: AGCTCTTACTGGCACCAGCCAACACTCAGCTAAGTT...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGAGTCTTGTTCTCAAATaGGGAACCCTTGGGGTCATT +
Preference number: 4 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVSLVLK*GTLGVI
Trigger: AATGACCCCAAGGGTTCCCCATTTGAGAACAAGACT...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CCA 90 bp GCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTAAGGGTTATCTTGGTTaGCTTTATGAGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: APALSWWSYCLVYQKTHCKGYLG*LYEEEW
Trigger: CCACTCCTCCTCATAAAGCCAACCAAGATAACCCTT...ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCCCGGCCCTTTCTTGGTaGAGTTATTGCCTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: FLVELLPCVPEDSLYLGFPALSW*SYCLVY
Trigger: GTACACAAGGCAATAACTCCACCAAGAAAGGGCCGG...GAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp ATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAAACTGGTCTGAATCTGTaGAAGAACAAATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ILVRCPQSSHVPTHTSPKTGLNL*KNKSAP
Trigger: AGGGGCAGATTTGTTCTTCCACAGATTCAGACCAGT...TTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCACAAAAACAGCTTGACTaGGATGACCGAAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSQKQLD*DDRSAC
Trigger: ACAAGCACTTCGGTCATCCCAGTCAAGCTGTTTTTG...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp CTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGAACCTTGATCTTGACCTaGAATATGGTGATCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LGLLRPFLGGVIALCTRRTLILT*NMVIGN
Trigger: GTTCCCGATCACCATATTCCAGGTCAAGATCAAGGT...TCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp ATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACATACTTGCTCTTGGTaGAAGCAGGGTCAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ILVRCPQSSHVPTHTSPKHTCSW*KQGQSH
Trigger: ATGACTTTGACCCTGCTTCCACCAAGAGCAAGTATG...TTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCATGCTGCCATTTGAAATaGTTTGCCCTTGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPCCHLK*FALAHS
Trigger: AGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCA...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCATTAAGCGTGTCTTCATaGAACTGCTGCCATTTGAAA +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSLSVSS*NCCHLK
Trigger: TTTCAAATGGCAGCAGTTCCATGAAGACACGCTTAA...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCTTAAGCGTGTCTTCATaGAACTGCTGCCATTTGAAA +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTLSVSS*NCCHLK
Trigger: TTTCAAATGGCAGCAGTTCCATGAAGACACGCTTAA...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAAGCTCACCTAAGGGATaGATGTGCGGAAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGSSPKG*MCGKHH
Trigger: ATGATGCTTTCCGCACATCCATCCCTTAGGTGAGCT...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTCTTACAAGATCGTGTTaGGCGAGAGAAAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCLTRSC*ARERKR
Trigger: TCTTTTCCTTTCTCTCGCCCAACACGATCTTGTAAG...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp ATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGTCTTGTTCTCAAATaGGGAACCCTTGGGGTCACT +
Preference number: 4 (lower is better)
Translates to: IQLGLLRPFLGGVIALCTSLVLK*GTLGVT
Trigger: AGTGACCCCAAGGGTTCCCCATTTGAGAACAAGACT...GGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 72 bp CGCTCCTCAGAAAGAACCGCTGAACAAGCTGCACGCTaGACCATTGACAAGGCTTTTGAAATTTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RSSERTAEQAAR*TIDKAFEICSG
Trigger: TCCACTGCAAATTTCAAAAGCCTTGTCAATGGTCAAGCGTGCAGCTTGTTCAGCGGTTCTTTCTGAGGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CAA 72 bp GCTCACCTAAGGGATGGATGTGCGGAAAGCATCATTTaGCTCTTGTTGCACTCAACAGACACACACACTGTC +
Preference number: 4 (lower is better)
Translates to: AHLRDGCAESII*LLLHSTDTHTV
Trigger: GACAGTGTGTGTGTCTGTTGAGTGCAACAAGAGCAAAATGATGCTTTCCGCACATCCATCCCTTAGGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CAA 72 bp CATACCCCAATAGTGCAAAGTTCCCTCTCTGCTGCTTaGAATGTTGACAGCCCAACTGTTGTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: HTPIVQSSLSAA*NVDSPTVVLGV
Trigger: GACTCCGAGAACAACAGTTGGGCTGTCAACATTCAAAGCAGCAGAGAGGGAACTTTGCACTATTGGGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CAA 72 bp AGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTaGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCA +
Preference number: 4 (lower is better)
Translates to: SCAYNSDCSGPF*VELLPCVPEDS
Trigger: TGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
3UTR CAA 72 bp CCAGAGAGTTCCACACTTAAGGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCCTTGGGGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: PESSTLKVRSIV*FSNGEPLGSLE
Trigger: TTCCAGTGACCCCAAGGGTTCCCCATTTGAGAACAAGACTATTGAACGCACCTTAAGTGTGGAACTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 72 bp ATCTTGAAGAGGATCTACTGCCTGGAGACCTTGATCTaGACCTGGAATATGGTGATCGGGAACACGACCTGT +
Preference number: 4 (lower is better)
Translates to: ILKRIYCLETLI*TWNMVIGNTTC
Trigger: ACAGGTCGTGTTCCCGATCACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
3UTR CAA 72 bp AGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTaGACTCATAGTAATAGCAGGATCTTGAAGAGGATC +
Preference number: 4 (lower is better)
Translates to: RENFGACGVCSG*THSNSRILKRI
Trigger: GATCCTCTTCAAGATCCTGCTATTACTATGAGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTAACTCCAATCCACAGTaGCACAGAGCACACACTCAT +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGNSNPQ*HRAHTH
Trigger: ATGAGTGTGTGCTCTGTGTCACTGTGGATTGGAGTT...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCATTGGATATTATTTCTaGTTGGTCACTGCACCACTT +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTIGYYF*LVTAPL
Trigger: AAGTGGTGCAGTGACCAATCAGAAATAATATCCAAT...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAATTGCAGGGTTTGTTCTaGTCCTGTGATTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKELQGLF*SCDCDL
Trigger: CAAATCACAATCACAGGATCAGAACAAACCCTGCAA...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACTGTGGCTTTTGCTGTTaGCAAATACTCTTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNCGFCC*QILFAL
Trigger: TAAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACA...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTTTGTGGTCAGATATTTaGGAAGCTCCGAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FTKNFKTVPQFCPCCVRSLWSDI*EAPSRD
Trigger: GTCCCTGCTCGGAGCTTCTCAAATATCTGACCACAA...AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp TACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCACAGGTAGCACTGGTCTaGATCTGTGGAAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: YNSDCSGPFLVELLPCVPQVALV*ICGRTN
Trigger: ATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTG...TGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp TACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCACTGCGCAAGCTTCTCTaGGCTTCTTTCAGTAAACTA +
Preference number: 4 (lower is better)
Translates to: YNSDCSGPFLVELLPCVPLRKLL*ASFSKL
Trigger: TAGTTTACTGAAAGAAGCTCAGAGAAGCTTGCGCAG...TGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATACTTCTTTTTGGAGGTaGATTTGTCTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SCPPVRTEDLLSCAYNSDTSFWR*ICLCCC
Trigger: ACAGCAGCAGAGACAAATGCACCTCCAAAAAGAAGT...ATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR GCA 90 bp TTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACACTTCTTTTTGGAGGTaGATTTGTCTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLSSCPPVRTEDLLSCAYTSFWR*ICLCCC
Trigger: ACAGCAGCAGAGACAAATGCACCTCCAAAAAGAAGT...GTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR GCA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGTCTTGGTGGAGTTATTaGCTTGTGTACCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: ASLMVVAPQSCKRTSALESWWSY*LVYQKT
Trigger: AGTCTTCTGGTACACAAGGCAATAACTCCACCAAGA...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR GCA 90 bp TACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCACCCGCAGATTTACTGTaGACTCCTCAATTTCACCAA +
Preference number: 4 (lower is better)
Translates to: YNSDCSGPFLVELLPCVPPADLL*TPQFHQ
Trigger: TTGGTGAAATTGAGGAGTGCACAGTAAATCTGCGGG...TGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGACCCGCAGATTTACTGTaGACTCCTCAATTTCACCAA +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGPADLL*TPQFHQ
Trigger: TTGGTGAAATTGAGGAGTGCACAGTAAATCTGCGGG...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TGCGGTGTCTGTAGTGGCTTGACTCATAGTAATAGCAGGATCTTGAAGAGGATCCCAGAGAGTCATACTTaGTCTTGGTGGAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: CGVCSGLTHSNSRILKRIPESHT*SWWKQG
Trigger: ACCCTGCTTCCACCAAGAGCAAGTATGACTCTCTGG...GATCCTCTTCAAGATCCTGCTATTACTATGAGTCAAGCCACTACAGACACCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGACCTAAGGGATGGATGTaGGGAAAGCATCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGPKGWM*GKHHFA
Trigger: AGCAAAATGATGCTTTCCGCACATCCATCCCTTAGG...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGCTACCCACAGTGTCTaGAGAAGATACAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQATHSV*RRYKSS
Trigger: GGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGC...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp GCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTGAGCTGACATTGCTTTaGCATTCCCATTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: APALSWWSYCLVYQKTHCELTLL*HSHFRN
Trigger: GTTTCTGAAATGGGAATGGCAAAGCAATGTCAGCTC...ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR GCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCTTTACAGACTGCTGTaGTGCAAAAGTAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNLYRLL*CKSSPL
Trigger: TAAAGGACTACTTTTGCAGCACAGCAGTCTGTAAAG...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR GCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAGACTGCATTCTCACTTaGCATCATTCTAACGAACCC +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGDCILT*HHSNEP
Trigger: GGGTTCGTTAGAATGATGGCAAGTGAGAATGCAGTC...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CCA 90 bp TCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACAAGGGTTATCTTGGTTaGCTTTATGAGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SGPFLVELLPCVPEDSLYKGYLG*LYEEEW
Trigger: CCACTCCTCCTCATAAAGCCAACCAAGATAACCCTT...GTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATGGTGGTCCGGCCCTTTCTTGGTaGAGTTATTGCCTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LLPCVPEDSLYLGFFDGGPALSW*SYCLVY
Trigger: GTACACAAGGCAATAACTCCACCAAGAAAGGGCCGG...ACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAAGTTGTCTAGAGTCTTaGAGCTCCTGTGATATATTA +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSSCLES*SSCDIL
Trigger: TAATATATCACAGGAGCTCCAAGACTCTAGACAACT...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CCA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCAGTTGTCTAGAGTCTTaGAGCTCCTGTGATATATTA +
Preference number: 4 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTSCLES*SSCDIL
Trigger: TAATATATCACAGGAGCTCCAAGACTCTAGACAACT...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGAGAAAATAAGGATTTaGGTGGTGACACAGAATCTC +
Preference number: 4 (lower is better)
Translates to: PPVRTEDLLSCAYNSDCSEKIRI*VVTQNL
Trigger: GAGATTCTGTGTCACCACCCAAATCCTTATTTTCTC...GGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTGAGAAAATAAGGATTTaGGTGGTGACACAGAATCTC +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCEKIRI*VVTQNL
Trigger: GAGATTCTGTGTCACCACCCAAATCCTTATTTTCTC...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CAAAAGTACAGCTCAAAGTCAGTTTCGTTTGACCTGCGCAAAGTGTATCCATTTGCCTCTCCCTTTGCTTaGCCCTCTCAGACTCTCGCT +
Preference number: 4 (lower is better)
Translates to: QKYSSKSVSFDLRKVYPFASPFA*PSQTLA
Trigger: AGCGAGAGTCTGAGAGGGCCAAGCAAAGGGAGAGGC...AAATGGATACACTTTGCGCAGGTCAAACGAAACTGACTTTGAGCTGTACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp ACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTTCTAACCCTTGGGGTCACTaGAAGATATGGCACATTTAT +
Preference number: 4 (lower is better)
Translates to: TEVLVQLGSDFLVLELFSNPWGH*KIWHIY
Trigger: ATAAATGTGCCATATCTTCCAGTGACCCCAAGGGTT...AGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTATGGATCAGATTCACTaGAGGCTGTTACCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGMDQIH*RLLPLS
Trigger: GCTCAGAGGTAACAGCCTCCAGTGAATCTGATCCAT...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CCA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAATTCCTTCGTGTCTGTaGTTTAAACCGTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSIPSCL*FKPSPC
Trigger: ACAAGGTGACGGTTTAAACCACAGACACGAAGGAAT...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR TCA 90 bp TTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTTGCAGGGTTTGTTCTaGTCCTGTGATTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: LCIQLGLLRPFLGGVIALLQGLF*SCDCDL
Trigger: CAAATCACAATCACAGGATCAGAACAAACCCTGCAA...CAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp GACTCACTGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGCGCTTTATTGCTCCATaGATTCTCAGTCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: DSLYLGFFDGGGTTVLQERFIAP*ILSLNN
Trigger: ATTGTTAAGACTGAGAATTCATGGAGCAATAAAGCG...CTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTCGCTTTATTGCTCCATaGATTCTCAGTCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCRFIAP*ILSLNN
Trigger: ATTGTTAAGACTGAGAATTCATGGAGCAATAAAGCG...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTGTGGCTTTTGCTGTTaGCAAATACTCTTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVCGFCC*QILFAL
Trigger: TAAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACA...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGGTACCTGGGCTTCTTTaGTGGTGGTGGCACCACAGT +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLVPGLL*WWWHHS
Trigger: ACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTAC...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTGTCTTGGAGCTCCTGTaGTATATTAATGAGTATTTC +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCVLELL*YINEYF
Trigger: GAAATACTCATTAATATATCACAGGAGCTCCAAGAC...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGCAGGTAGCACTGGTCTaGATCTGTGGAAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQQVALV*ICGRTN
Trigger: ATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTG...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TTTGCTTGGCCCTCTCAGACTCTCGCTTCTCATACTCTCTGCGATATTCTTCCCAGACACATTGAACAATaGATAGGATTGCGTGCCATC +
Preference number: 4 (lower is better)
Translates to: FAWPSQTLASHTLCDILPRHIEQ*IGLRAI
Trigger: GATGGCACGCAATCCTATTCATTGTTCAATGTGTCT...GGGAAGAATATCGCAGAGAGTATGAGAAGCGAGAGTCTGAGAGGGCCAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCAAAGAAGGAGACACATTaGACAATGAATAGGATTGCG +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPKKETH*TMNRIA
Trigger: CGCAATCCTATTCATTGTTCAATGTGTCTCCTTCTT...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAAAGAAGGAGACACATTaGACAATGAATAGGATTGCG +
Preference number: 4 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSKKETH*TMNRIA
Trigger: CGCAATCCTATTCATTGTTCAATGTGTCTCCTTCTT...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp GCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTGTGTTGTGTCAGGTCTaGTTTTACCGACATAAATCA +
Preference number: 4 (lower is better)
Translates to: APALSWWSYCLVYQKTHCVLCQV*FYRHKS
Trigger: TGATTTATGTCGGTAAAATCAGACCTGACACAACAC...ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAAAGCAATTACACTATCTaGACACATCTCAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKESNYTI*THLREF
Trigger: GAACTCTCTGAGATGTGTTCAGATAGTGTAATTGCT...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGCAGAGCACACACTCATaGAGGCAACCAGCCCCTTAC +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLQSTHS*RQPAPY
Trigger: GTAAGGGGCTGGTTGCCTGCATGAGTGTGTGCTCTG...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp GGTGGAGTTAGGCCCAAATTCCTTCGTGTCTGTGGTTTAAACCGTCACCTTGTTAGGTGCATTTGTCTCTaGTGCTGTTTCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGVRPKFLRVCGLNRHLVRCICL*CCFCSL
Trigger: CAGAGAACAGAAACAGCAGCAGAGACAAATGCACCT...AACAAGGTGACGGTTTAAACCACAGACACGAAGGAATTTGGGCCTAACTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR GCA 90 bp TTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATGGTGGTGAACAAATCTGCCCCTaGCAATCAGAGGAGACATCT +
Preference number: 4 (lower is better)
Translates to: LLPCVPEDSLYLGFFDGGEQICP*QSEETS
Trigger: AGATGTCTCCTCTGATTGGCAGGGGCAGATTTGTTC...ACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTTTGAAGAGGATCTACTaGCTGGAGACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGLKRIY*LETLIL
Trigger: CAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAA...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGCGCATTCTGGTCAGGTaGCCCCAGTCCTCACATGTA +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLRILVR*PQSSHV
Trigger: TACATGTGAGGACTGGGGGCACCTGACCAGAATGCG...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCAGTGTCTTCATGGAACTaGTGCCATTTGAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPVSSWN*CHLKWF
Trigger: AAACCATTTCAAATGGCAGCAGTTCCATGAAGACAC...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp GCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTATTAGTTTTTACACCTaGAGTTCCAGAGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: APALSWWSYCLVYQKTHCISFYT*SSREFH
Trigger: GTGGAACTCTCTGGAACTGCAGGTGTAAAAACTAAT...ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CCA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTGATATTATTTCTGATTaGTCACTGCACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCDIISD*SLHHLS
Trigger: ACTCAAGTGGTGCAGTGACCAATCAGAAATAATATC...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATGGTGGTTGTTTCTGTTCTCTGTaGGTTTGGTGTGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LLPCVPEDSLYLGFFDGGCFCSL*VWCEEG
Trigger: ACCCTCCTCACACCAAACCCACAGAGAACAGAAACA...ACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp TTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATGGTGGTAAGACTCACTGTACCTaGGCTTCTTTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLPCVPEDSLYLGFFDGGKTHCT*ASLMVV
Trigger: CACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTT...ACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CCA 90 bp ATTACAGCCATCAAGAAAGGACACATAATCATTACCTACTGGAAGCTCACATCTGCAGACTGGGCCGCTTaGTCTTCCTTTCCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: ITAIKKGHIIITYWKLTSADWAA*SSFPRV
Trigger: GACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGC...AGATGTGAGCTTCCAGTAGGTAATGATTATGTGTCCTTTCTTGATGGCTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTACTGGTCTGAATCTGTaGAAGAACAAATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGTGLNL*KNKSAP
Trigger: AGGGGCAGATTTGTTCTTCCACAGATTCAGACCAGT...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTCAAAAACAGCTTGACTaGGATGACCGAAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGQKQLD*DDRSAC
Trigger: ACAAGCACTTCGGTCATCCCAGTCAAGCTGTTTTTG...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGCAAAAACAGCTTGACTaGGATGACCGAAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQQKQLD*DDRSAC
Trigger: ACAAGCACTTCGGTCATCCCAGTCAAGCTGTTTTTG...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCACACAGAATCTCTACATaGAGAGTTAAAAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSHRIST*RVKRRT
Trigger: TGTTCTTCTTTTAACTCTCCATGTAGAGATTCTGTG...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR TCA 90 bp CTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACGCTTTATTGCTCCATaGATTCTCAGTCTTAACAAT +
Preference number: 4 (lower is better)
Translates to: LGLLRPFLGGVIALCTRRRFIAP*ILSLNN
Trigger: ATTGTTAAGACTGAGAATTCATGGAGCAATAAAGCG...TCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp GGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTGTGGCTTTTGCTGTTaGCAAATACTCTTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: GYLGWLYEEEWWVELGPNCGFCC*QILFAL
Trigger: TAAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACA...ATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR TCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTCTGTGGGTTTGGTGTaGGGAGGGTCATCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLSVGLV*GGSSFV
Trigger: CACAAACGATGACCCTCCTCACACCAAACCCACAGA...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTAGGACTGAGGACTTGCTaGGTTGTGCATACAACTCGG +
Preference number: 4 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLGLRTC*VVHTTR
Trigger: CCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCC...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp CTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGAGTCTTGGAGCTCCTGTaGTATATTAATGAGTATTTC +
Preference number: 4 (lower is better)
Translates to: LGLLRPFLGGVIALCTRRVLELL*YINEYF
Trigger: GAAATACTCATTAATATATCACAGGAGCTCCAAGAC...TCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCAGTCTTGGAGCTCCTGTaGTATATTAATGAGTATTTC +
Preference number: 4 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPVLELL*YINEYF
Trigger: GAAATACTCATTAATATATCACAGGAGCTCCAAGAC...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAAAGAATTGTTCATTACTaGAATCACTGTCCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKERIVHY*NHCPSV
Trigger: AACTGAGGGACAGTGATTTCAGTAATGAACAATTCT...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp TGCGGTGTCTGTAGTGGCTTGACTCATAGTAATAGCAGGATCTTGAAGAGGATCAAAGTCAGTTTCGTTTaGCCTGCGCAAAGTGTATCC +
Preference number: 4 (lower is better)
Translates to: CGVCSGLTHSNSRILKRIKVSFV*PAQSVS
Trigger: GGATACACTTTGCGCAGGTCAAACGAAACTGACTTT...GATCCTCTTCAAGATCCTGCTATTACTATGAGTCAAGCCACTACAGACACCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGGGACGCGCTGTCCCATaGGGTATTCGCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELGRAVP*GIRHPS
Trigger: AGAGGGATGGCGAATACCTCATGGGACAGCGCGTCC...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGCTCAGTCTTAACAATTaGAGGGTTTGTTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: LCIQLGLLRPFLGGVIALLSLNN*RVCSDP
Trigger: AGGATCAGAACAAACCCTGCAATTGTTAAGACTGAG...CAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR GCA 90 bp CAAAAGTACAGCTCAAAGTCAGTTTCGTTTGACCTGCGCAAAGTGTATCCATTTGCATACAACTCGGATTaGTCCGGCCCTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QKYSSKSVSFDLRKVYPFAYNSD*SGPFLV
Trigger: CACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGC...AAATGGATACACTTTGCGCAGGTCAAACGAAACTGACTTTGAGCTGTACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAATGAATAGGATTGCGTaGCATCCCAAGGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTMNRIA*HPKGSS
Trigger: TGAGCTACCCTTGGGATGGCACGCAATCCTATTCAT...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGGAGAATTTCGGTGCGTaGGGTGTCTGTAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLENFGA*GVCSGL
Trigger: CAAGCCACTACAGACACCGCACGCACCGAAATTCTC...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp AAGGATTTGGGTGGTGACACAGAATCTCTACATGGAGAGTTAAAAGAAGAACAAACGGCGCTCTTCAATTaGCTTCTGCCTCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KDLGGDTESLHGELKEEQTALFN*LLPLPL
Trigger: GAGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGT...TTGTTCTTCTTTTAACTCTCCATGTAGAGATTCTGTGTCACCACCCAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCACAGTTTCGTTTGACCTaGGCAAAGTGTATCCATTTT +
Preference number: 4 (lower is better)
Translates to: YNSDCSGPFLVELLPCVPQFRLT*AKCIHF
Trigger: AAAATGGATACACTTTGCGCAGGTCAAACGAAACTG...TGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGACAGTTTCGTTTGACCTaGGCAAAGTGTATCCATTTT +
Preference number: 4 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGQFRLT*AKCIHF
Trigger: AAAATGGATACACTTTGCGCAGGTCAAACGAAACTG...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATCCAGAGAGTCATACTTaGTCTTGGTGGAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHPESHT*SWWKQG
Trigger: ACCCTGCTTCCACCAAGAGCAAGTATGACTCTCTGG...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAAGGGAACATGTTACCTaGGCAAGCTTCTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTREHVT*ASFSEL
Trigger: AAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCT...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTTCCATCTTTACAGACTaGTGTGCTGCAAAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGSIFTD*CAAKVV
Trigger: GACTACTTTTGCAGCACAGCAGTCTGTAAAGATGGA...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CCA 90 bp ACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTTCTAGTTGTCTAGAGTCTTaGAGCTCCTGTGATATATTA +
Preference number: 4 (lower is better)
Translates to: TEVLVQLGSDFLVLELFSSCLES*SSCDIL
Trigger: TAATATATCACAGGAGCTCCAAGACTCTAGACAACT...AGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCACAGAATCTCTACATaGAGAGTTAAAAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNHRIST*RVKRRT
Trigger: TGTTCTTCTTTTAACTCTCCATGTAGAGATTCTGTG...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GATCTTGAAGAGGATCTACTGCCTGGAGACCTTGATCTTGACCTGGAATATGGTCATACTTGCTCTTGGTaGAAGCAGGGTCAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: DLEEDLLPGDLDLDLEYGHTCSW*KQGQSH
Trigger: ATGACTTTGACCCTGCTTCCACCAAGAGCAAGTATG...ACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAAAGGATATTAGTTCTATaGAACCTGTGGTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKERILVL*NLWFLQ
Trigger: CTGAAGAAACCACAGGTTCCATAGAACTAATATCCT...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAGAAACTTTAGCATTCTaGTGCCCGCAGTATCCTCTC +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTETLAF*CPQYPL
Trigger: GAGAGGATACTGCGGGCACCAGAATGCTAAAGTTTC...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp GGGAAAGTAGAACTAACCACAACCTTCAGTGTTCCCTCCACCTTGTTCTGTCTCTTTACCAGTTCTAACTaGCCAAGTCCTCACATGAAC +
Preference number: 4 (lower is better)
Translates to: GKVELTTTFSVPSTLFCLFTSSN*PSPHMN
Trigger: GTTCATGTGAGGACTTGGCCAGTTAGAACTGGTAAA...GAGACAGAACAAGGTGGAGGGAACACTGAAGGTTGTGGTTAGTTCTACTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CCA 90 bp GGGAAAGTAGAACTAACCACAACCTTCAGTGTTCCCTCCACCTTGTTCTGTCTCCAGCATGACTTAGAATaGGCCTGTAACTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: GKVELTTTFSVPSTLFCLQHDLE*ACNLTS
Trigger: ACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTG...GAGACAGAACAAGGTGGAGGGAACACTGAAGGTTGTGGTTAGTTCTACTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp AAGATCAACATTTTGGACATTTACATGGGTGTCAGGATTAAGGATGAACTACAGACGCCATCCAGCTCCTaGATGACGCCAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KINILDIYMGVRIKDELQTPSSS*MTPVKL
Trigger: AAGCTTGACTGGCGTCATTCAGGAGCTGGATGGCGT...CTGTAGTTCATCCTTAATCCTGACACCCATGTAAATGTCCAAAATGTTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp TACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAATTGGATATTATTTCTaGTTGGTCACTGCACCACTT +
Preference number: 4 (lower is better)
Translates to: YNSDCSGPFLVELLPCVPIGYYF*LVTAPL
Trigger: AAGTGGTGCAGTGACCAATCAGAAATAATATCCAAT...TGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR TCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTCTAGTGTCTCTGTaGGGACTGCTAGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHCLVSL*GLLASL
Trigger: CAAACTTGCTAGCAGTCCTCACAGAGACACTAGACA...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp AGCACTCTGAAAATCTCCATATGCAATAGATTTAAATGCCTTCTGCCAAAAGAGCTTGGGGTCATTTGGTaGCTCTGGGGTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: STLKISICNRFKCLLPKELGVIW*LWGQRK
Trigger: CTTCCTCTGACCCCAGAGTCACCAAATGACCCCAAG...CTCTTTTGGCAGAAGGCATTTAAATCTATTGCATATGGAGATTTTCAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR TCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTCGAGAAAAGGACCTTaGACGAGAGCGCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLSRKGP*TRAHPL
Trigger: CAAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGA...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp CACGGCATGAAGGCAATGGCCCACGGTCTTCTAAAAATCCTACAGATCTATGCTGTGTTGTGTCAGGTCTaGTTTTACCGACATAAATCA +
Preference number: 4 (lower is better)
Translates to: HGMKAMAHGLLKILQIYAVLCQV*FYRHKS
Trigger: TGATTTATGTCGGTAAAATCAGACCTGACACAACAC...AGCATAGATCTGTAGGATTTTTAGAAGACCGTGGGCCATTGCCTTCATGCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGTGTTGTGTCAGGTCTaGTTTTACCGACATAAATCA +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGVLCQV*FYRHKS
Trigger: TGATTTATGTCGGTAAAATCAGACCTGACACAACAC...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAAAAGTCAGTTTCGTTTaGCCTGCGCAAAGTGTATCC +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTKVSFV*PAQSVS
Trigger: GGATACACTTTGCGCAGGTCAAACGAAACTGACTTT...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATAACAAGCTGCACGCTTaGCCATTGACAAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHNKLHA*PLTRLL
Trigger: CAAAAGCCTTGTCAATGGTCAAGCGTGCAGCTTGTT...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCCTCAGAAAGAACCGCTaGACAAGCTGCACGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFLRKNR*TSCTLD
Trigger: GTCAAGCGTGCAGCTTGTTCAGCGGTTCTTTCTGAG...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp AGAGCTCACCTAATTAGTAAAGCAAACAAAGGTAGACATCTACCCCCTTGGTTATTTCTAAGACCCGGCTaGGAAGCCTGGGAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: RAHLISKANKGRHLPPWLFLRPG*EAWESR
Trigger: TCTACTTTCCCAGGCTTCTCAGCCGGGTCTTAGAAA...TAACCAAGGGGGTAGATGTCTACCTTTGTTTGCTTTACTAATTAGGTGAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp GGGAAAGTAGAACTAACCACAACCTTCAGTGTTCCCTCCACCTTGTTCTGTCTCCTGAACCAAGTCTCCTaGAGGTATAAATGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: GKVELTTTFSVPSTLFCLLNQVS*RYKCKV
Trigger: TACTTTGCATTTATACCTTCAGGAGACTTGGTTCAG...GAGACAGAACAAGGTGGAGGGAACACTGAAGGTTGTGGTTAGTTCTACTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGAAGTAACAGACGAATaGATGAAAGATGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGEVTDE*MKDAHS
Trigger: TGAATGGGCATCTTTCATTCATTCGTCTGTTACTTC...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR GCA 90 bp TGCAGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGACTCAGAGTCCTGGTTaGACATGTCCCACGCCATCC +
Preference number: 4 (lower is better)
Translates to: CRRYKSSTNSRCNLKSIETQSPG*TCPTPS
Trigger: GGATGGCGTGGGACATGTGCAACCAGGACTCTGAGT...CTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp GGTACCATTTATTGCTCATTCTTTCTGTGGGAAATAGACAGGAATAAACAGGTTACTCAGAGTCCTGGTTaGACATGTCCCACGCCATCC +
Preference number: 4 (lower is better)
Translates to: GTIYCSFFLWEIDRNKQVTQSPG*TCPTPS
Trigger: GGATGGCGTGGGACATGTGCAACCAGGACTCTGAGT...AACCTGTTTATTCCTGTCTATTTCCCACAGAAAGAATGAGCAATAAATGGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR GCA 90 bp ATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTTACTCTTCGCTTTATTaGTCCATGAATTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ISHTRENFGACGVCSGLTYSSLY*SMNSQS
Trigger: AGACTGAGAATTCATGGAGCAATAAAGCGAAGAGTA...AGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp GGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTACTCTTCGCTTTATTaGTCCATGAATTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GYLGWLYEEEWWVELGPNYSSLY*SMNSQS
Trigger: AGACTGAGAATTCATGGAGCAATAAAGCGAAGAGTA...ATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR GCA 90 bp TTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTTCTTGGTGGAGTTATTaGCTTGTGTACCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: FTKNFKTVPQFCPCCVRSSWWSY*LVYQKT
Trigger: AGTCTTCTGGTACACAAGGCAATAACTCCACCAAGA...AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATAAGTTCAGGAAGATCTaGGCAAAGAGGCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHKFRKI*AKRLVF
Trigger: GAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTT...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTAGACTGCGACTGTGTGTaGGACTTCTTTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLDCDCV*DFFLEV
Trigger: CACCTCCAAAAAGAAGTCCCACACACAGTCGCAGTC...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCCTTTATGAGGAGGAGTaGTGGGTGGAGTTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFLYEEE*WVELGL
Trigger: CAGGCCTAACTCCACCCACCACTCCTCCTCATAAAG...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCGCTCCGGCCCTTTCTTaGTGGAGTTATTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFAPALS*WSYCLV
Trigger: CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR CAA 72 bp TGCGTCCACAAAAGTACAGCTCAAAGTCAGTTTCGTTaGACCTGCGCAAAGTGTATCCATTTTCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CVHKSTAQSQFR*TCAKCIHFQEQ
Trigger: CTGCTCTTGAAAATGGATACACTTTGCGCAGGTCAAACGAAACTGACTTTGAGCTGTACTTTTGTGGACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATCATGGTTCTGGGTACTaGGACCACTGCATTCATTAT +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHHGSGY*DHCIHY
Trigger: ATAATGAATGCAGTGGTCTCAGTACCCAGAACCATG...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGCTGCTTTGAATGTTaGCAGCCCAACTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHCCFEC*QPNCCS
Trigger: AGAACAACAGTTGGGCTGTCAACATTCAAAGCAGCA...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp GGGAAAGTAGAACTAACCACAACCTTCAGTGTTCCCTCCACCTTGTTCTGTCTCTGCATGGCATTCACCTaGTATGAAATAGGTGATTTT +
Preference number: 4 (lower is better)
Translates to: GKVELTTTFSVPSTLFCLCMAFT*YEIGDF
Trigger: AAAATCACCTATTTCATATCAGGTGAATGCCATGCA...GAGACAGAACAAGGTGGAGGGAACACTGAAGGTTGTGGTTAGTTCTACTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR GCA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTTACTCTTCGCTTTATTaGTCCATGAATTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGYSSLY*SMNSQS
Trigger: AGACTGAGAATTCATGGAGCAATAAAGCGAAGAGTA...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCGTGGAAGAACAAATCTaGCCCTGCCAATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFVEEQI*PCQSEE
Trigger: CTCCTCTGATTGGCAGGGGCAGATTTGTTCTTCCAC...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCAGAGACCTGCTTGCTTaGCTCCAAAGTCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFRDLLA*LQSLSQ
Trigger: CTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCT...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TGCAGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAATGGTTTGCCCTTaGGCATTCTGGTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CRRYKSSTNSRCNLKSIEEMVCP*AFWSGA
Trigger: GGCACCTGACCAGAATGCGCAAGGGCAAACCATTTC...CTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACATCTTCATGGAACTGCTaGCATTTGAAATGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTSSWNC*HLKWFA
Trigger: GGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp GGTGGAGTTAGGCCCAAATTCCTTCGTGTCTGTGGTTTAAACCGTCACCTTGTTGATATTATTTCTGATTaGTCACTGCACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: GGVRPKFLRVCGLNRHLVDIISD*SLHHLS
Trigger: ACTCAAGTGGTGCAGTGACCAATCAGAAATAATATC...AACAAGGTGACGGTTTAAACCACAGACACGAAGGAATTTGGGCCTAACTCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CCA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATCAAACAGCCGCAGACTaGGCCGCTTGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHQTAAD*AAWSSF
Trigger: AAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTG...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTACGGATTTCCTGGTCTTaGAGCTGTTTTCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLRISWS*SCFLVL
Trigger: CAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCG...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp AAGATCAACATTTTGGACATTTACATGGGTGTCAGGATTAAGGATGAACTACAGCATCCAGCTCCTGAATaGCGCCAGTCAAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KINILDIYMGVRIKDELQHPAPE*RQSSFF
Trigger: GAAAAAGCTTGACTGGCGTCATTCAGGAGCTGGATG...CTGTAGTTCATCCTTAATCCTGACACCCATGTAAATGTCCAAAATGTTGATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp TGCAGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGTGTCAGCGCATCAAATaGGGGCAATCCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: CRRYKSSTNSRCNLKSIECQRIK*GQSVFI
Trigger: GATGAAGACGGATTGCCCTCATTTGATGCGCTGACA...CTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGCATGGTTCTGGGTACTaGGACCACTGCATTCATTAT +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLHGSGY*DHCIHY
Trigger: ATAATGAATGCAGTGGTCTCAGTACCCAGAACCATG...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACATGTGGCTTTTGCTGTTaGCAAATACTCTTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTCGFCC*QILFAL
Trigger: TAAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACA...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp GATCTTGAAGAGGATCTACTGCCTGGAGACCTTGATCTTGACCTGGAATATGGTAGAATTGTTCATTACTaGAATCACTGTCCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: DLEEDLLPGDLDLDLEYGRIVHY*NHCPSV
Trigger: AACTGAGGGACAGTGATTTCAGTAATGAACAATTCT...ACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCGTAATAGCAGGATCTTaGAGAGGATCTACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFVIAGS*RGSTAW
Trigger: CCAGGCAGTAGATCCTCTTCAAGATCCTGCTATTAC...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGAGGTGCATTTGTCTCTaGTGCTGTTTCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLRCICL*CCFCSL
Trigger: CAGAGAACAGAAACAGCAGCAGAGACAAATGCACCT...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp TCATCAAACAGGCCATCCATGGCTAGTCCTGAATTTATAAACATAGGTAGTTTGTGTAAGTGTTGTGACTaGGACTGTGTGTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: SSNRPSMASPEFINIGSLCKCCD*DCVWDF
Trigger: GAAGTCCCACACACAGTCGCAGTCACAACACTTACA...CAAACTACCTATGTTTATAAATTCAGGACTAGCCATGGATGGCCTGTTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTCTTGGTGGAGTTATTaGCTTGTGTACCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHSWWSY*LVYQKT
Trigger: AGTCTTCTGGTACACAAGGCAATAACTCCACCAAGA...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCAACTTAGCTGAGTGTTaGCTGGTGCCAGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFNLAEC*LVPVRA
Trigger: AGCTCTTACTGGCACCAGCCAACACTCAGCTAAGTT...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp AAGATCAACATTTTGGACATTTACATGGGTGTCAGGATTAAGGATGAACTACAGCAAATGGGGAACCCTTaGGGTCATTTGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: KINILDIYMGVRIKDELQQMGNP*GHLVTL
Trigger: CAGAGTCACCAAATGACCCCAAGGGTTCCCCATTTG...CTGTAGTTCATCCTTAATCCTGACACCCATGTAAATGTCCAAAATGTTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTAAGTCTTGTTCTCAAATaGGGAACCCTTGGGGTCATT +
Preference number: 4 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLSLVLK*GTLGVI
Trigger: AATGACCCCAAGGGTTCCCCATTTGAGAACAAGACT...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp ATTACAGCCATCAAGAAAGGACACATAATCATTACCTACTGGAAGCTCACATCTAAGACTCACTGTACCTaGGCTTCTTTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ITAIKKGHIIITYWKLTSKTHCT*ASLMVV
Trigger: CACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTT...AGATGTGAGCTTCCAGTAGGTAATGATTATGTGTCCTTTCTTGATGGCTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAAGAATTGTTCATTACTaGAATCACTGTCCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTRIVHY*NHCPSV
Trigger: AACTGAGGGACAGTGATTTCAGTAATGAACAATTCT...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp ATTACAGCCATCAAGAAAGGACACATAATCATTACCTACTGGAAGCTCACATCTGTGTCTGTAGTGGCTTaGCTCATAGTAATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ITAIKKGHIIITYWKLTSVSVVA*LIVIAG
Trigger: TCCTGCTATTACTATGAGTCAAGCCACTACAGACAC...AGATGTGAGCTTCCAGTAGGTAATGATTATGTGTCCTTTCTTGATGGCTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCCTGCGCAAGCTTCTCTaGGCTTCTTTCAGTAAACTA +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFLRKLL*ASFSKL
Trigger: TAGTTTACTGAAAGAAGCTCAGAGAAGCTTGCGCAG...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACACAATTTGAAGTCCATTaGGGAAAACTATCTTCATGG +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTQFEVH*GKLSSW
Trigger: CCATGAAGATAGTTTTCCTCAATGGACTTCAAATTG...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp ATTACAGCCATCAAGAAAGGACACATAATCATTACCTACTGGAAGCTCACATCTCCTACAGATCTATGCTaGAATTTGCCTCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: ITAIKKGHIIITYWKLTSPTDLC*NLPPVM
Trigger: CATCACTGGAGGCAAATTTCAGCATAGATCTGTAGG...AGATGTGAGCTTCCAGTAGGTAATGATTATGTGTCCTTTCTTGATGGCTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTCTCAGTCTTAACAATTaGAGGGTTTGTTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLILSLNN*RVCSDP
Trigger: AGGATCAGAACAAACCCTGCAATTGTTAAGACTGAG...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp ATTACAGCCATCAAGAAAGGACACATAATCATTACCTACTGGAAGCTCACATCTTTGAAGAGGATCTACTaGCTGGAGACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: ITAIKKGHIIITYWKLTSLKRIY*LETLIL
Trigger: CAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAA...AGATGTGAGCTTCCAGTAGGTAATGATTATGTGTCCTTTCTTGATGGCTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp GAATACACACTCCAAATGTTACTGAATTCCATTCCAGGGACTCCACACTCAGATCAGTTTCGTTTGACCTaGGCAAAGTGTATCCATTTT +
Preference number: 4 (lower is better)
Translates to: EYTLQMLLNSIPGTPHSDQFRLT*AKCIHF
Trigger: AAAATGGATACACTTTGCGCAGGTCAAACGAAACTG...ATCTGAGTGTGGAGTCCCTGGAATGGAATTCAGTAACATTTGGAGTGTGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATGTGTCTTCATGGAACTaGTGCCATTTGAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHVSSWN*CHLKWF
Trigger: AAACCATTTCAAATGGCAGCAGTTCCATGAAGACAC...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp GTTGTGATAAAGAAAACTAGCCGATATGTCATCCTTCGTTTAATTCACTTGCCACTAACTCTACCTCCGTaGCAACCAACACTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: VVIKKTSRYVILRLIHLPLTLPP*QPTLKG
Trigger: TCCTTTCAGTGTTGGTTGGCACGGAGGTAGAGTTAG...TGGCAAGTGAATTAAACGAAGGATGACATATCGGCTAGTTTTCTTTATCACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CCA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGCCGGCCCTTTCTTGGTaGAGTTATTGCCTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELPALSW*SYCLVY
Trigger: GTACACAAGGCAATAACTCCACCAAGAAAGGGCCGG...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCACCTTGATCTTGACCTaGAATATGGTGATCGGGAAC +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFTLILT*NMVIGN
Trigger: GTTCCCGATCACCATATTCCAGGTCAAGATCAAGGT...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATTGTCTAGTGTCTCTGTaGGGACTGCTAGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHCLVSL*GLLASL
Trigger: CAAACTTGCTAGCAGTCCTCACAGAGACACTAGACA...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp ATTTTCAAGAGCAGCAAAAGCATCACAGGTATAACGGTAGGTAATGAAACCATACATGGTTCTGGGTACTaGGACCACTGCATTCATTAT +
Preference number: 4 (lower is better)
Translates to: IFKSSKSITGITVGNETIHGSGY*DHCIHY
Trigger: ATAATGAATGCAGTGGTCTCAGTACCCAGAACCATG...TATGGTTTCATTACCTACCGTTATACCTGTGATGCTTTTGCTGCTCTTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR GCA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTACTCAGTCTTAACAATTaGAGGGTTTGTTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLLSLNN*RVCSDP
Trigger: AGGATCAGAACAAACCCTGCAATTGTTAAGACTGAG...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTACTCTTCGCTTTATTaGTCCATGAATTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHYSSLY*SMNSQS
Trigger: AGACTGAGAATTCATGGAGCAATAAAGCGAAGAGTA...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCTCTTGGTGGAGTTATTaGCTTGTGTACCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFSWWSY*LVYQKT
Trigger: AGTCTTCTGGTACACAAGGCAATAACTCCACCAAGA...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGATGAATAGGATTGCGTaGCATCCCAAGGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELMNRIA*HPKGSS
Trigger: TGAGCTACCCTTGGGATGGCACGCAATCCTATTCAT...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR GCA 90 bp AAGATCAACATTTTGGACATTTACATGGGTGTCAGGATTAAGGATGAACTACAGGCTATCAAAATTAGCTaGATTGGCCTGGGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KINILDIYMGVRIKDELQAIKIS*IGLGVK
Trigger: TTTCACCCCCAGGCCAATGCAGCTAATTTTGATAGC...CTGTAGTTCATCCTTAATCCTGACACCCATGTAAATGTCCAAAATGTTGATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp TGCAGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGAGAGGACTTCAGCTTTaGAGAAGCCCTAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: CRRYKSSTNSRCNLKSIERGLQL*RSPKRV
Trigger: AACCCTTTTAGGGCTTCTCCAAAGCTGAAGTCCTCT...CTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACACACAGAATCTCTACATaGAGAGTTAAAAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTHRIST*RVKRRT
Trigger: TGTTCTTCTTTTAACTCTCCATGTAGAGATTCTGTG...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGGAGAAAATAAGGATTTaGGTGGTGACACAGAATCTC +
Preference number: 4 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLEKIRI*VVTQNL
Trigger: GAGATTCTGTGTCACCACCCAAATCCTTATTTTCTC...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CCA 90 bp TGCAGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGCATACTTGCTCTTGGTaGAAGCAGGGTCAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: CRRYKSSTNSRCNLKSIEHTCSW*KQGQSH
Trigger: ATGACTTTGACCCTGCTTCCACCAAGAGCAAGTATG...CTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTTTTGGACATTTACATaGGTGTCAGGATTAAGGATG +
Preference number: 4 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHFWTFT*VSGLRM
Trigger: CATCCTTAATCCTGACACCCATGTAAATGTCCAAAA...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCAAGAAGGAGACACATTaGACAATGAATAGGATTGCG +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFKKETH*TMNRIA
Trigger: CGCAATCCTATTCATTGTTCAATGTGTCTCCTTCTT...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGAAAGTCAGTTTCGTTTaGCCTGCGCAAAGTGTATCC +
Preference number: 4 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELKVSFV*PAQSVS
Trigger: GGATACACTTTGCGCAGGTCAAACGAAACTGACTTT...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR TCA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATCACTCCAAATGTTACTaGATTCCATTCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHHSKCY*IPFQGL
Trigger: GAGTCCCTGGAATGGAATTCAGTAACATTTGGAGTG...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp AGTAAAGCAAACAAAGGTAGACATCTACCCCCTTGGTTAAAAAGAAAGGCCTTCCAAGTAAATGAGTACTaGTCTTGTGGGAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: SKANKGRHLPPWLKRKAFQVNEY*SCGKEF
Trigger: GAATTCTTTCCCACAAGATCAGTACTCATTTACTTG...GAAGGCCTTTCTTTTTAACCAAGGGGGTAGATGTCTACCTTTGTTTGCTTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp AGAGCTCACCTAATTAGTAAAGCAAACAAAGGTAGACATCTACCCCCTTGGTTAAGCAAAGAAGCAGCTTaGTATGTCTTTGTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: RAHLISKANKGRHLPPWLSKEAA*YVFVKD
Trigger: ATCCTTTACAAAGACATATCAAGCTGCTTCTTTGCT...TAACCAAGGGGGTAGATGTCTACCTTTGTTTGCTTTACTAATTAGGTGAGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR GCA 90 bp TGCAGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGCCAGTGATGATGGGGTaGACGTGTTCATTTGAAATA +
Preference number: 4 (lower is better)
Translates to: CRRYKSSTNSRCNLKSIEPVMMG*TCSFEI
Trigger: TATTTCAAATGAACACGTGCACCCCATCATCACTGG...CTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR GCA 90 bp AGTAAAGCAAACAAAGGTAGACATCTACCCCCTTGGTTAAAAAGAAAGGCCTTCCTGAGTTTCAGTGTCTaGATATGTAAAACAGGAATG +
Preference number: 4 (lower is better)
Translates to: SKANKGRHLPPWLKRKAFLSFSV*ICKTGM
Trigger: CATTCCTGTTTTACATATGCAGACACTGAAACTCAG...GAAGGCCTTTCTTTTTAACCAAGGGGGTAGATGTCTACCTTTGTTTGCTTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CCA 90 bp GTTTATTTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGTGTCTTTGTAAAGGATaGCTGTCACCCAAATTCATG +
Preference number: 4 (lower is better)
Translates to: VYLMQHDLEWACNLTSVLCLCKG*LSPKFM
Trigger: CATGAATTTGGGTGACAGCCATCCTTTACAAAGACA...CAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAAATAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp GTTTATTTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGCAAGGATATAAACTTTaGAGTCCGATAAATTTGGGG +
Preference number: 4 (lower is better)
Translates to: VYLMQHDLEWACNLTSVLQGYKL*SPINLG
Trigger: CCCCAAATTTATCGGACTTCAAAGTTTATATCCTTG...CAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAAATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp GTTGTGATAAAGAAAACTAGCCGATATGTCATCCTTCGTTTAATTCACTTGCCAGACAAGTGTACTGAGTaGGGAATGTTCAATTTACCA +
Preference number: 4 (lower is better)
Translates to: VVIKKTSRYVILRLIHLPDKCTE*GMFNLP
Trigger: TGGTAAATTGAACATTCCTCACTCAGTACACTTGTC...TGGCAAGTGAATTAAACGAAGGATGACATATCGGCTAGTTTTCTTTATCACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR GCA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCCGAATGAATGAAAGATaGCCATTCAGTTGTATCATG +
Preference number: 4 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFRMNER*PFSCIM
Trigger: CATGATACAACTGAATGGGCATCTTTCATTCATTCG...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CCA 90 bp GTTTATTTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGGATATTATTTCTGATTaGTCACTGCACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: VYLMQHDLEWACNLTSVLDIISD*SLHHLS
Trigger: ACTCAAGTGGTGCAGTGACCAATCAGAAATAATATC...CAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAAATAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR CAA 72 bp TATTTAATGCAGCATGACTTAGAATGGGCCTGTAACTaGACAAGTGTACTGAGTGAGGAATGTTCAATTTAC +
Preference number: 4 (lower is better)
Translates to: YLMQHDLEWACN*TSVLSEECSIY
Trigger: GTAAATTGAACATTCCTCACTCAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
3UTR CAA 72 bp TCCATGGCTAGTCCTGAATTTATAAACATAGGTAGTTaGGAGAATTGTTCATTACTGAAATCACTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SMASPEFINIGS*ENCSLLKSLSL
Trigger: GAGGGACAGTGATTTCAGTAATGAACAATTCTCCAAACTACCTATGTTTATAAATTCAGGACTAGCCATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR TCA 90 bp GTTGTGATAAAGAAAACTAGCCGATATGTCATCCTTCGTTTAATTCACTTGCCAATTGGATATTATTTCTaGTTGGTCACTGCACCACTT +
Preference number: 4 (lower is better)
Translates to: VVIKKTSRYVILRLIHLPIGYYF*LVTAPL
Trigger: AAGTGGTGCAGTGACCAATCAGAAATAATATCCAAT...TGGCAAGTGAATTAAACGAAGGATGACATATCGGCTAGTTTTCTTTATCACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATGGTCTTAGACTACAGTaGTTGAAGTTCTCATTACAG +
Preference number: 4 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHGLRLQ*LKFSLQ
Trigger: CTGTAATGAGAACTTCAATCACTGTAGTCTAAGACC...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR TCA 90 bp AAGATCAACATTTTGGACATTTACATGGGTGTCAGGATTAAGGATGAACTACAGAGCAGTTCACATTATTaGAAATGTCTGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: KINILDIYMGVRIKDELQSSSHY*KCLSHR
Trigger: CCTATGTGACAGACATTTTCAATAATGTGAACTGCT...CTGTAGTTCATCCTTAATCCTGACACCCATGTAAATGTCCAAAATGTTGATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGGTTCTATGGAACCTGTaGTTTCTTCAGGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELVLWNL*FLQDCH
Trigger: ATGACAATCCTGAAGAAACCACAGGTTCCATAGAAC...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CCA 90 bp GTTGTGATAAAGAAAACTAGCCGATATGTCATCCTTCGTTTAATTCACTTGCCAGTCAACTGTGTGATTTaGGGAAAACAAATAACCTCT +
Preference number: 4 (lower is better)
Translates to: VVIKKTSRYVILRLIHLPVNCVI*GKQITS
Trigger: AGAGGTTATTTGTTTTCCCCAAATCACACAGTTGAC...TGGCAAGTGAATTAAACGAAGGATGACATATCGGCTAGTTTTCTTTATCACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CCA 90 bp GGTACCATTTATTGCTCATTCTTTCTGTGGGAAATAGACAGGAATAAACAGGTTCCTCTACAAAATGCATaGCATTCACCTGATATGAAA +
Preference number: 4 (lower is better)
Translates to: GTIYCSFFLWEIDRNKQVPLQNA*HSPDMK
Trigger: TTTCATATCAGGTGAATGCCATGCATTTTGTAGAGG...AACCTGTTTATTCCTGTCTATTTCCCACAGAAAGAATGAGCAATAAATGGTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR TCA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGTTAGACTACAGTGATTaGAGTTCTCATTACAGCCAT +
Preference number: 4 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELLDYSD*SSHYSH
Trigger: ATGGCTGTAATGAGAACTTCAATCACTGTAGTCTAA...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
3UTR CAA 72 bp TTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTaGTTATTGTTGTTGTTGTTCTTGTTGTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: LPLQQLCSCKPL*LLLLLFLLYCC
Trigger: ACAACAATACAACAAGAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
3UTR CAA 72 bp AGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTaGAAGTCCATTGAGGAAAACTATCTTCATGGTAAC +
Preference number: 4 (lower is better)
Translates to: RRYKSSTNSRCN*KSIEENYLHGN
Trigger: GTTACCATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp GCCATAGGCAGAACCTACAGCCGTCTCGGCTCACCAGCTAACTCTACCTCCGTGTGGTCACTGCACCACTaGAGTCCACCCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: AIGRTYSRLGSPANSTSVWSLHH*SPPRKL
Trigger: CAGCTTTCTGGGTGGACTCAAGTGGTGCAGTGACCA...CACGGAGGTAGAGTTAGCTGGTGAGCCGAGACGGCTGTAGGTTCTGCCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CAA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCCCTCTGCCTCTCCCTTaGCTTGGCCCTCTCAGACTC +
Preference number: 5 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLPLPLP*LGPLRL
Trigger: GAGTCTGAGAGGGCCAAGCAAAGGGAGAGGCAGAGG...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TCATGGTCACCAAACAGCCGCAGACTGGGCCGCTTGGTCTTCCTTTCCTCGTGTTGGTCACTGCACCACTaGAGTCCACCCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SWSPNSRRLGRLVFLSSCWSLHH*SPPRKL
Trigger: CAGCTTTCTGGGTGGACTCAAGTGGTGCAGTGACCA...ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTGGTGACCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCGAAGGACTAGCCTCATaGTCAGTGGTCACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPEGLAS*SVVTSP
Trigger: TGGAGACGTGACCACTGACAATGAGGCTAGTCCTTC...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp GCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCAAACCAGGGACAAGGTaGCCCACAGTGACCCAGAAA +
Preference number: 5 (lower is better)
Translates to: AHSGQVPPVLTCTHTYFPKPGTR*PTVTQK
Trigger: TTTCTGGGTCACTGTGGGCAACCTTGTCCCTGGTTT...GGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS CCA 90 bp ACCAGAGCAGCACACTCGATGTCACTCCATACAGACTCAGAGTCCTaGTTGCACATGTCCCACGCCATCCAGCTCCTGAATGACGCCAGT +
Preference number: 5 (lower is better)
Translates to: TRAAHSMSLHTDSES*LHMSHAIQLLNDAS
Trigger: ACTGGCGTCATTCAGGAGCTGGATGGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGTATGGAGTGACATCGAGTGTGCTGCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507380.1
ENST00000513205.5
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS-3UTR CAA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATAACCCTTGGGGTCATTaGGTGACTCTGGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHNPWGH*VTLGSE
Trigger: CTCTGACCCCAGAGTCACCAAATGACCCCAAGGGTT...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCACGCAGACTGGGCCGCTaGGTCTTCCTTTCCTCGTGT +
Preference number: 5 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPRRLGR*VFLSSC
Trigger: ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCG...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCATGCCTCTCCCTTTGCTaGGCCCTCTCAGACTCTCGC +
Preference number: 5 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPCLSLC*ALSDSR
Trigger: GCGAGAGTCTGAGAGGGCCAAGCAAAGGGAGAGGCA...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp AGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCCACGGCGCTCTTCAATaGCCTTCTGCCTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: RTEDLLSCAYNSDCSGPFHGALQ*PSASAS
Trigger: AGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGTG...GAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCACGAGCAGGGACGTCTTaGTGGCTTTTGCTGTTGACA +
Preference number: 5 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSRAGTS*WLLLLT
Trigger: TGTCAACAGCAAAAGCCACAAAGACGTCCCTGCTCG...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACAACCCTTGGGGTCATTaGGTGACTCTGGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNNPWGH*VTLGSE
Trigger: CTCTGACCCCAGAGTCACCAAATGACCCCAAGGGTT...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGGTGGCACCACAGTCTaGCAAGAGGACTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSGGTTV*QEDFSF
Trigger: AAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACC...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp GGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATCGCAGACTGGGCCGCTaGGTCTTCCTTTCCTCGTGT +
Preference number: 5 (lower is better)
Translates to: GYLGWLYEEEWWVELGPNRRLGR*VFLSSC
Trigger: ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCG...ATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CAA 90 bp ATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACACGGCGCTCTTCAATaGCCTTCTGCCTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: ILVRCPQSSHVPTHTSPKHGALQ*PSASAS
Trigger: AGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGTG...TTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS CCA 90 bp AAGAAGGTGAGTGCAGGTGAAAAGTCCACTGTGAGTGGCCGGCCCTaGGAAGGCACTTCCCTGAAATGCTGCTTTGGTAGAAGCAACACA +
Preference number: 5 (lower is better)
Translates to: KKVSAGEKSTVSGRP*EGTSLKCCFGRSNT
Trigger: TGTGTTGCTTCTACCAAAGCAGCATTTCAGGGAAGTGCCTTCCCAGGGCCGGCCACTCACAGTGGACTTTTCACCTGCACTCACCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514517.1
CDS-3UTR CAA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCATGGTCACTGCACCACTaGAGTCCACCCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSWSLHH*SPPRKL
Trigger: CAGCTTTCTGGGTGGACTCAAGTGGTGCAGTGACCA...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTAACCCTTGGGGTCATTaGGTGACTCTGGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LAELCIQLGLLRPFLGGVNPWGH*VTLGSE
Trigger: CTCTGACCCCAGAGTCACCAAATGACCCCAAGGGTT...AACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CAA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTGGTGGCACCACAGTCTaGCAAGAGGACTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCGGTTV*QEDFSF
Trigger: AAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACC...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp GCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTTGTACCTGGGCTTCTTaGATGGTGGTGGCACCACAG +
Preference number: 5 (lower is better)
Translates to: APALSWWSYCLVYQKTHCCTWAS*MVVAPQ
Trigger: CTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA...ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTTGCTCCGGCCCTTTCTaGGTGGAGTTATTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCCSGPF*VELLPC
Trigger: ACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCA...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGTGAGGACTGAGGACTaGCTGAGTTGTGCATACAAC +
Preference number: 5 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSVRTED*LSCAYN
Trigger: GTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCAC...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTGAGAGACCTGCTTGCTaGCCTCCAAAGTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCERPAC*PPKSLS
Trigger: TGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTC...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCCTTGGAGCTGTTTTCTaGTGCTGCAAGGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLLGAVF*CCKERP
Trigger: AGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAG...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATCTCAGTTCACCGGTCTaGTCTGCTTCGTCGTCAAAA +
Preference number: 5 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHLSSPV*SASSSK
Trigger: TTTTGACGACGAAGCAGACAAGACCGGTGAACTGAG...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCGTCGAGAAAAGGACCTaGAACGAGAGCGCATCCTTT +
Preference number: 5 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLVEKRT*NESASF
Trigger: AAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGAC...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATGGCTGTAGGGCGATCTaGAACGTGATCTCACATACA +
Preference number: 5 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHGCRAI*NVISHT
Trigger: TGTATGTGAGATCACGTTCAAGATCGCCCTACAGCC...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTCCTCTGCCTCTCCCTTaGCTTGGCCCTCTCAGACTC +
Preference number: 5 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGPLPLP*LGPLRL
Trigger: GAGTCTGAGAGGGCCAAGCAAAGGGAGAGGCAGAGG...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCATTGACAGCCCAACTGTaGTTCTCGGAGTCGTTTAGC +
Preference number: 5 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSLTAQL*FSESFS
Trigger: GCTAAACGACTCCGAGAACAACAGTTGGGCTGTCAA...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS TCA 90 bp CAGACTCAGAGTCCTGGTTGCACATGTCCCACGCCATCCAGCTCCTaGATGACGCCAGTCAAGCTTTTTCAACTCCAATCCACAGTGACA +
Preference number: 5 (lower is better)
Translates to: QTQSPGCTCPTPSSS*MTPVKLFQLQSTVT
Trigger: TGTCACTGTGGATTGGAGTTGAAAAAGCTTGACTGGCGTCATTCAGGAGCTGGATGGCGTGGGACATGTGCAACCAGGACTCTGAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507380.1
ENST00000513205.5
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS-3UTR CAA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGATGGTCACTGCACCACTaGAGTCCACCCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGWSLHH*SPPRKL
Trigger: CAGCTTTCTGGGTGGACTCAAGTGGTGCAGTGACCA...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp CTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTCGAGCAGGGACGTCTTaGTGGCTTTTGCTGTTGACA +
Preference number: 5 (lower is better)
Translates to: LAELCIQLGLLRPFLGGVRAGTS*WLLLLT
Trigger: TGTCAACAGCAAAAGCCACAAAGACGTCCCTGCTCG...AACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATGTGTGGGACTTCTTTTaGGAGGTGCATTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHVWDFF*EVHLSL
Trigger: CAGAGACAAATGCACCTCCAAAAAGAAGTCCCACAC...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCC +
Preference number: 5 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSVRSIV*FSNGEP
Trigger: GGGTTCCCCATTTGAGAACAAGACTATTGAACGCAC...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGGGTGGCACCACAGTCTaGCAAGAGGACTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVGGTTV*QEDFSF
Trigger: AAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACC...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp GGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTGTACCTGGGCTTCTTaGATGGTGGTGGCACCACAG +
Preference number: 5 (lower is better)
Translates to: GYLGWLYEEEWWVELGPNCTWAS*MVVAPQ
Trigger: CTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA...ATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CAA 90 bp GCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTTGCTCCGGCCCTTTCTaGGTGGAGTTATTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: APALSWWSYCLVYQKTHCCSGPF*VELLPC
Trigger: ACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCA...ACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAATGCATACAACTCGGATaGCTCCGGCCCTTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKECIQLG*LRPFLG
Trigger: ACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCA...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp ACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTGTGAGGACTGAGGACTaGCTGAGTTGTGCATACAAC +
Preference number: 5 (lower is better)
Translates to: TWASLMVVAPQSCKRTSAVRTED*LSCAYN
Trigger: GTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCAC...AGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CTTTGGAGAAGCCCTAAAAGGGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTCGCAGACTGGGCCGCTaGGTCTTCCTTTCCTCGTGT +
Preference number: 5 (lower is better)
Translates to: LWRSPKRVILVGFMRRSGRRLGR*VFLSSC
Trigger: ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCG...ACCACTCCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGGGCTTCTCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp ATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTGAGAGACCTGCTTGCTaGCCTCCAAAGTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: MTEVLVQLGSDFLVLELFERPAC*PPKSLS
Trigger: TGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTC...AAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp ATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTCAAGGAGAGACCTGCTaGCTTGCCTCCAAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: MTEVLVQLGSDFLVLELFQGETC*LASKVS
Trigger: AGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTG...AAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCTCAGTTCACCGGTCTaGTCTGCTTCGTCGTCAAAA +
Preference number: 5 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNLSSPV*SASSSK
Trigger: TTTTGACGACGAAGCAGACAAGACCGGTGAACTGAG...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCCTGGAGACCTTGATCTaGACCTGGAATATGGTGATC +
Preference number: 5 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLLETLI*TWNMVI
Trigger: GATCACCATATTCCAGGTCAAGATCAAGGTCTCCAG...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCGGTGTCTGTAGTGGCTaGACTCATAGTAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLGVCSG*THSNSR
Trigger: CCTGCTATTACTATGAGTCAAGCCACTACAGACACC...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTTGCCTCTCCCTTTGCTaGGCCCTCTCAGACTCTCGC +
Preference number: 5 (lower is better)
Translates to: FTKNFKTVPQFCPCCVRSCLSLC*ALSDSR
Trigger: GCGAGAGTCTGAGAGGGCCAAGCAAAGGGAGAGGCA...AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATGGTGGTCCTCTGCCTCTCCCTTaGCTTGGCCCTCTCAGACTC +
Preference number: 5 (lower is better)
Translates to: LLPCVPEDSLYLGFFDGGPLPLP*LGPLRL
Trigger: GAGTCTGAGAGGGCCAAGCAAAGGGAGAGGCAGAGG...ACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS TCA 90 bp CTGTGGGTTTGGTGTGAGGAGGGTCATCGTTTGTGGTCAGATATTTaGGAAGCTCCGAGCAGGGACGTCTTTGTGGCTTTTGCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: LWVWCEEGHRLWSDI*EAPSRDVFVAFAVD
Trigger: GTCAACAGCAAAAGCCACAAAGACGTCCCTGCTCGGAGCTTCTCAAATATCTGACCACAAACGATGACCCTCCTCACACCAAACCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS GCA 90 bp GCGACTGTGTGTGGGACTTCTTTTTGGAGGTGCATTTGTCTCTGCTaGTGTTTCTGTTCTCTGTGGGTTTGGTGTGAGGAGGGTCATCGT +
Preference number: 5 (lower is better)
Translates to: ATVCGTSFWRCICLC*CFCSLWVWCEEGHR
Trigger: ACGATGACCCTCCTCACACCAAACCCACAGAGAACAGAAACAGCAGCAGAGACAAATGCACCTCCAAAAAGAAGTCCCACACACAGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS-3UTR CAA 90 bp TTTGCTTGGCCCTCTCAGACTCTCGCTTCTCATACTCTCTGCGATATTCTTCCCGAAGGACTAGCCTCATaGTCAGTGGTCACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: FAWPSQTLASHTLCDILPEGLAS*SVVTSP
Trigger: TGGAGACGTGACCACTGACAATGAGGCTAGTCCTTC...GGGAAGAATATCGCAGAGAGTATGAGAAGCGAGAGTCTGAGAGGGCCAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp AGGACTGAGGACTTGCTGAGTTGTGCATACAACTCGGATTGCTCCGGCCCTTTCTTTGTGGTCAGATATTaGAGAAGCTCCGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RTEDLLSCAYNSDCSGPFFVVRY*RSSEQG
Trigger: TCCCTGCTCGGAGCTTCTCAAATATCTGACCACAAA...GAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp ACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTGTGTGGGACTTCTTTTaGGAGGTGCATTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TWASLMVVAPQSCKRTSAVWDFF*EVHLSL
Trigger: CAGAGACAAATGCACCTCCAAAAAGAAGTCCCACAC...AGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGTGCATACAACTCGGATaGCTCCGGCCCTTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: PFLGGVIALCTRRLTVPGCIQLG*LRPFLG
Trigger: ACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCA...CCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp TCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACTGCATACAACTCGGATaGCTCCGGCCCTTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: SGPFLVELLPCVPEDSLYCIQLG*LRPFLG
Trigger: ACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCA...GTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGAGTGAGGACTGAGGACTaGCTGAGTTGTGCATACAAC +
Preference number: 5 (lower is better)
Translates to: LGLLRPFLGGVIALCTRRVRTED*LSCAYN
Trigger: GTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCAC...TCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACACGCAGACTGGGCCGCTaGGTCTTCCTTTCCTCGTGT +
Preference number: 5 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTRRLGR*VFLSSC
Trigger: ACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCG...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGCTCAGTTCACCGGTCTaGTCTGCTTCGTCGTCAAAA +
Preference number: 5 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVLSSPV*SASSSK
Trigger: TTTTGACGACGAAGCAGACAAGACCGGTGAACTGAG...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGGTCGAGAAAAGGACCTaGAACGAGAGCGCATCCTTT +
Preference number: 5 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVVEKRT*NESASF
Trigger: AAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGAC...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCTGGAGACCTTGATCTaGACCTGGAATATGGTGATC +
Preference number: 5 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNLETLI*TWNMVI
Trigger: GATCACCATATTCCAGGTCAAGATCAAGGTCTCCAG...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp GAACACGACCTGTGTCGAGAAAAGGACCTTGAACGAGAGCGCATCCTTTGGGGTCTGGAGACCTTGATCTaGACCTGGAATATGGTGATC +
Preference number: 5 (lower is better)
Translates to: EHDLCREKDLERERILWGLETLI*TWNMVI
Trigger: GATCACCATATTCCAGGTCAAGATCAAGGTCTCCAG...ACCCCAAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGACACAGGTCGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTTACTGCCTGGAGACCTaGATCTTGACCTGGAATATG +
Preference number: 5 (lower is better)
Translates to: LKWFALAHSGQVPPVLTCYCLET*ILTWNM
Trigger: CATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTA...ACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAAGTAATAGCAGGATCTaGAAGAGGATCTACTGCCTG +
Preference number: 5 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSSNSRI*KRIYCL
Trigger: CAGGCAGTAGATCCTCTTCAAGATCCTGCTATTACT...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCAAAGTCAGTTTCGTTaGACCTGCGCAAAGTGTATC +
Preference number: 5 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTQSQFR*TCAKCI
Trigger: GATACACTTTGCGCAGGTCAAACGAAACTGACTTTG...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAAGAGTCATACTTGCTCTaGGTGGAAGCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKEESYLL*VEAGSK
Trigger: CTTTGACCCTGCTTCCACCAAGAGCAAGTATGACTC...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp TTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACGAGTCATACTTGCTCTaGGTGGAAGCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: FLSSCPPVRTEDLLSCAYESYLL*VEAGSK
Trigger: CTTTGACCCTGCTTCCACCAAGAGCAAGTATGACTC...GTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp GGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACAGTTATGAGAGAAAGCTaGCTTCAAGTTGATTCTGCA +
Preference number: 5 (lower is better)
Translates to: GLPLRILVRCPQSSHVPTVMRES*LQVDSA
Trigger: TGCAGAATCAACTTGAAGCAAGCTTTCTCTCATAAC...TGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCATCCCTCTCTGCTGCTTaGAATGTTGACAGCCCAACT +
Preference number: 5 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPSLSAA*NVDSPT
Trigger: AGTTGGGCTGTCAACATTCAAAGCAGCAGAGAGGGA...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS GCA 90 bp ACTGCGACTGTGTGTGGGACTTCTTTTTGGAGGTGCATTTGTCTCTaGTGCTGTTTCTGTTCTCTGTGGGTTTGGTGTGAGGAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: TATVCGTSFWRCICL*CCFCSLWVWCEEGH
Trigger: ATGACCCTCCTCACACCAAACCCACAGAGAACAGAAACAGCAGCAGAGACAAATGCACCTCCAAAAAGAAGTCCCACACACAGTCGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS CCA 90 bp AAGTACAAGGCCTTCTCAAATGTGATGAGGCAGGGCTTTGCAAATTaGAAGAAGGTGAGTGCAGGTGAAAAGTCCACTGTGAGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: KYKAFSNVMRQGFAN*KKVSAGEKSTVSGR
Trigger: CCGGCCACTCACAGTGGACTTTTCACCTGCACTCACCTTCTTCCAATTTGCAAAGCCCTGCCTCATCACATTTGAGAAGGCCTTGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514517.1
CDS-3UTR CAA 90 bp GGTGGAGTTAGGCCCAAATTCCTTCGTGTCTGTGGTTTAAACCGTCACCTTGTTGAAGGACTAGCCTCATaGTCAGTGGTCACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GGVRPKFLRVCGLNRHLVEGLAS*SVVTSP
Trigger: TGGAGACGTGACCACTGACAATGAGGCTAGTCCTTC...AACAAGGTGACGGTTTAAACCACAGACACGAAGGAATTTGGGCCTAACTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CAA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCATTTGTGGTCAGATATTaGAGAAGCTCCGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSFVVRY*RSSEQG
Trigger: TCCCTGCTCGGAGCTTCTCAAATATCTGACCACAAA...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAGTGTGGGACTTCTTTTaGGAGGTGCATTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: QLGLLRPFLGGVIALCTRVWDFF*EVHLSL
Trigger: CAGAGACAAATGCACCTCCAAAAAGAAGTCCCACAC...TCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp TATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTCCTCAAATGGGGAACCCTaGGGGTCATTTGGTGACTCT +
Preference number: 5 (lower is better)
Translates to: YLGWLYEEEWWVELGPNSSNGEP*GSFGDS
Trigger: AGAGTCACCAAATGACCCCAAGGGTTCCCCATTTGA...GGAATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACCAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CAA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGATCAAATGGGGAACCCTaGGGGTCATTTGGTGACTCT +
Preference number: 5 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGSNGEP*GSFGDS
Trigger: AGAGTCACCAAATGACCCCAAGGGTTCCCCATTTGA...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CACGGCATGAAGGCAATGGCCCACGGTCTTCTAAAAATCCTACAGATCTATGCTCAAGGAGAGACCTGCTaGCTTGCCTCCAAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: HGMKAMAHGLLKILQIYAQGETC*LASKVS
Trigger: AGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTG...AGCATAGATCTGTAGGATTTTTAGAAGACCGTGGGCCATTGCCTTCATGCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGCAAGGAGAGACCTGCTaGCTTGCCTCCAAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQQGETC*LASKVS
Trigger: AGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTG...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATCTCACATACAAGGGAGAATTTCGGTGCGTGCGGTGTCTGTAGTGGCTTGACTGTCGTCAAAAACAGCTaGACTGGGATGACCGAAGTG +
Preference number: 5 (lower is better)
Translates to: ISHTRENFGACGVCSGLTVVKNS*TGMTEV
Trigger: CACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGAC...AGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGAGAGTCATACTTGCTCTaGGTGGAAGCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGESYLL*VEAGSK
Trigger: CTTTGACCCTGCTTCCACCAAGAGCAAGTATGACTC...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS TCA 90 bp GTGCATTTGTCTCTGCTGCTGTTTCTGTTCTCTGTGGGTTTGGTGTaGGGAGGGTCATCGTTTGTGGTCAGATATTTGAGAAGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: VHLSLLLFLFSVGLV*GGSSFVVRYLRSSE
Trigger: CTCGGAGCTTCTCAAATATCTGACCACAAACGATGACCCTCCTCACACCAAACCCACAGAGAACAGAAACAGCAGCAGAGACAAATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS TCA 90 bp AGGGCAATCCGTCTTCATCCACAGGGAGACTGTCTAGTGTCTCTGTaGGGACTGCTAGCAAGTTTGCCTCATTCTCTTCATCTATCTTCC +
Preference number: 5 (lower is better)
Translates to: RAIRLHPQGDCLVSL*GLLASLPHSLHLSS
Trigger: GGAAGATAGATGAAGAGAATGAGGCAAACTTGCTAGCAGTCCTCACAGAGACACTAGACAGTCTCCCTGTGGATGAAGACGGATTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CAA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCATTGTGGCTTTTGCTGTaGACAAATACTCTTCGCTTT +
Preference number: 5 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSLWLLL*TNTLRF
Trigger: AAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACAA...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp GCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCAGCTAGGGAACATTTGTGGCTTTTGCTGTaGACAAATACTCTTCGCTTT +
Preference number: 5 (lower is better)
Translates to: ALSHEVFAIPLSSSAREHLWLLL*TNTLRF
Trigger: AAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACAA...ATGTTCCCTAGCTGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp TACACACACACATACATGCACACACGCACACTCCATCACCAAGAGACTCCAGGATTTGTGGTCAGATATTaGAGAAGCTCCGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: YTHTYMHTRTLHHQETPGFVVRY*RSSEQG
Trigger: TCCCTGCTCGGAGCTTCTCAAATATCTGACCACAAA...TCCTGGAGTCTCTTGGTGATGGAGTGTGCGTGTGTGCATGTATGTGTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCATTTTTGGAGGTGCATTaGTCTCTGCTGCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPFLEVH*SLLLFL
Trigger: CAGAAACAGCAGCAGAGACAAATGCACCTCCAAAAA...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACTTTTTGGAGGTGCATTaGTCTCTGCTGCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: FLSSCPPVRTEDLLSCAYFLEVH*SLLLFL
Trigger: CAGAAACAGCAGCAGAGACAAATGCACCTCCAAAAA...GTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp TGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCGAGGAAGAGATAAAGTaGTTGGTTTGGCTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: CHLKWFALAHSGQVPPVLEEEIK*LVWLVS
Trigger: ACTTACAAGCCAAACCAACAACTTTATCTCTTCCTC...GAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCC +
Preference number: 5 (lower is better)
Translates to: IQLGLLRPFLGGVIALCTVRSIV*FSNGEP
Trigger: GGGTTCCCCATTTGAGAACAAGACTATTGAACGCAC...GGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp TTCCTTTCCTCGTGTCCACCAGTGAGGACTGAGGACTTGCTGAGTTGTGCATACCCTAAAAGGGTTATCTaGGTTGGCTTTATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: FLSSCPPVRTEDLLSCAYPKRVI*VGFMRR
Trigger: CCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGG...GTATGCACAACTCAGCAAGTCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CTTTGGAGAAGCCCTAAAAGGGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGTGGCACCACAGTCTaGCAAGAGGACTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: LWRSPKRVILVGFMRRSGGGTTV*QEDFSF
Trigger: AAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACC...ACCACTCCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGGGCTTCTCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACATGTACCTGGGCTTCTTaGATGGTGGTGGCACCACAG +
Preference number: 5 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTCTWAS*MVVAPQ
Trigger: CTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CATCCTCAGCTAGGGAACATGTTACCTGCGCAAGCTTCTCTGAGCTTCTTTCAGGGTGGAGTTATTGCCTaGTGTACCAGAAGACTCACT +
Preference number: 5 (lower is better)
Translates to: HPQLGNMLPAQASLSFFQGGVIA*CTRRLT
Trigger: AGTGAGTCTTCTGGTACACAAGGCAATAACTCCACC...CTGAAAGAAGCTCAGAGAAGCTTGCGCAGGTAACATGTTCCCTAGCTGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCATTCTTGGTGGAGTTATaGCCTTGTGTACCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSFLVEL*PCVPED
Trigger: GTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp GCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGCTTTGGAGTTCTTGGTGGAGTTATaGCCTTGTGTACCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: ASLMVVAPQSCKRTSALEFLVEL*PCVPED
Trigger: GTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA...CTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGTCGGATTTCCTGGTCTaGGAGCTGTTTTCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: PFLGGVIALCTRRLTVPGSDFLV*ELFSCA
Trigger: AGCACAAGAAAACAGCTCCAAGACCAGGAAATCCGA...CCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTCGTCAAAAACAGCTaGACTGGGATGACCGAAGTG +
Preference number: 5 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQVVKNS*TGMTEV
Trigger: CACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGAC...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCGGTGTCTGTAGTGGCTaGACTCATAGTAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: IQLGLLRPFLGGVIALCTGVCSG*THSNSR
Trigger: CCTGCTATTACTATGAGTCAAGCCACTACAGACACC...GGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATCACGGCGCTCTTCAATaGCCTTCTGCCTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHHGALQ*PSASAS
Trigger: AGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGTG...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCACAAAGTCAGTTTCGTTaGACCTGCGCAAAGTGTATC +
Preference number: 5 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSQSQFR*TCAKCI
Trigger: GATACACTTTGCGCAGGTCAAACGAAACTGACTTTG...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTAGGGAAGGACGCGCTGTCCCATGAGGTATTCGCCATCCCTCTGTCATCCTCACAAAGTCATCTGAGTTaGAATCTAGGTCTGCATAGT +
Preference number: 5 (lower is better)
Translates to: LGKDALSHEVFAIPLSSSQSHLS*NLGLHS
Trigger: ACTATGCAGACCTAGATTCAAACTCAGATGACTTTG...TGAGGATGACAGAGGGATGGCGAATACCTCATGGGACAGCGCGTCCTTCCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000613098.4
CDS-3UTR CAA 90 bp AAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCAAAGTCATCTGAGTTaGAATCTAGGTCTGCATAGT +
Preference number: 5 (lower is better)
Translates to: KWFALAHSGQVPPVLTCTQSHLS*NLGLHS
Trigger: ACTATGCAGACCTAGATTCAAACTCAGATGACTTTG...GGTACATGTGAGGACTGGGGGCACCTGACCAGAATGCGCAAGGGCAAACCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CTGGTGCCCGCAGTATCCTCTCCCACCCAGATTCCATGGCAAAAGGAAAAAGAATCTTACAAGATCGTGTaGGGCGAGAGAAAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: LVPAVSSPTQIPWQKEKESYKIV*GERKEK
Trigger: CTTTTCCTTTCTCTCGCCCAACACGATCTTGTAAGA...TTCTTTTTCCTTTTGCCATGGAATCTGGGTGGGAGAGGATACTGCGGGCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCACTTGTTGAGCTGACATaGCTTTGCCATTCCCATTTC +
Preference number: 5 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSLVELT*LCHSHF
Trigger: GAAATGGGAATGGCAAAGCAATGTCAGCTCAACAAG...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS TCA 90 bp AGGGCAATCCGTCTTCATCCACAGGGAGACTGTCTAGTGTCTCTGTaGGGACTGCTAGCAAGTTTGCCTCATTCTCTTCATCTATCTTCT +
Preference number: 5 (lower is better)
Translates to: RAIRLHPQGDCLVSL*GLLASLPHSLHLSS
Trigger: AGAAGATAGATGAAGAGAATGAGGCAAACTTGCTAGCAGTCCTCACAGAGACACTAGACAGTCTCCCTGTGGATGAAGACGGATTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000508380.1
ENST00000509642.5
ENST00000509702.5
ENST00000512169.1
ENST00000513205.5
ENST00000612355.1
ENST00000617484.4
CDS GCA 90 bp GTAAGTGTTGTGACTGCGACTGTGTGTGGGACTTCTTTTTGGAGGTaGATTTGTCTCTGCTGCTGTTTCTGTTCTCTGTGGGTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: VSVVTATVCGTSFWR*ICLCCCFCSLWVWC
Trigger: ACACCAAACCCACAGAGAACAGAAACAGCAGCAGAGACAAATGCACCTCCAAAAAGAAGTCCCACACACAGTCGCAGTCACAACACTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS-3UTR CAA 90 bp CACGGCATGAAGGCAATGGCCCACGGTCTTCTAAAAATCCTACAGATCTATGCTGTGTGGGACTTCTTTTaGGAGGTGCATTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: HGMKAMAHGLLKILQIYAVWDFF*EVHLSL
Trigger: CAGAGACAAATGCACCTCCAAAAAGAAGTCCCACAC...AGCATAGATCTGTAGGATTTTTAGAAGACCGTGGGCCATTGCCTTCATGCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp TGTGCTGCAAGGAGAGACCTGCTTGCTTGCCTCCAAAGTCTCTCTCAGGTAGCAGAGGAAGAGATAAAGTaGTTGGTTTGGCTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: CAARRDLLACLQSLSQVAEEEIK*LVWLVS
Trigger: ACTTACAAGCCAAACCAACAACTTTATCTCTTCCTC...TGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTCCTTGCAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCC +
Preference number: 5 (lower is better)
Translates to: FLVELLPCVPEDSLYLGFVRSIV*FSNGEP
Trigger: GGGTTCCCCATTTGAGAACAAGACTATTGAACGCAC...GAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp TTTGCTTGGCCCTCTCAGACTCTCGCTTCTCATACTCTCTGCGATATTCTTCCCCCTAAAAGGGTTATCTaGGTTGGCTTTATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: FAWPSQTLASHTLCDILPPKRVI*VGFMRR
Trigger: CCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGG...GGGAAGAATATCGCAGAGAGTATGAGAAGCGAGAGTCTGAGAGGGCCAAGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp GAATACACACTCCAAATGTTACTGAATTCCATTCCAGGGACTCCACACTCAGATTGTACCTGGGCTTCTTaGATGGTGGTGGCACCACAG +
Preference number: 5 (lower is better)
Translates to: EYTLQMLLNSIPGTPHSDCTWAS*MVVAPQ
Trigger: CTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA...ATCTGAGTGTGGAGTCCCTGGAATGGAATTCAGTAACATTTGGAGTGTGTATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACATGCATACAACTCGGATaGCTCCGGCCCTTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTCIQLG*LRPFLG
Trigger: ACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCA...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAGAGAGACCTGCTTGCTaGCCTCCAAAGTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTERPAC*PPKSLS
Trigger: TGAGAGAGACTTTGGAGGCAAGCAAGCAGGTCTCTC...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp GATCTTGAAGAGGATCTACTGCCTGGAGACCTTGATCTTGACCTGGAATATGGTCTTGGAGCTGTTTTCTaGTGCTGCAAGGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: DLEEDLLPGDLDLDLEYGLGAVF*CCKERP
Trigger: AGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAG...ACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGTACTGCCTGGAGACCTaGATCTTGACCTGGAATATG +
Preference number: 5 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQYCLET*ILTWNM
Trigger: CATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTA...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTGGTGTCTGTAGTGGCTaGACTCATAGTAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: FMELLPFEMVCPCAFWSGGVCSG*THSNSR
Trigger: CCTGCTATTACTATGAGTCAAGCCACTACAGACACC...ACCTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATGGTGGTGGCTGTAGGGCGATCTaGAACGTGATCTCACATACA +
Preference number: 5 (lower is better)
Translates to: LLPCVPEDSLYLGFFDGGGCRAI*NVISHT
Trigger: TGTATGTGAGATCACGTTCAAGATCGCCCTACAGCC...ACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAAGTCATCTGAGTTaGAATCTAGGTCTGCATAGT +
Preference number: 5 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNQSHLS*NLGLHS
Trigger: ACTATGCAGACCTAGATTCAAACTCAGATGACTTTG...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCAAGCATCATTTTGCTCTaGTTGCACTCAACAGACACA +
Preference number: 5 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPSIILL*LHSTDT
Trigger: TGTGTCTGTTGAGTGCAACAAGAGCAAAATGATGCT...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp TGCGGTGTCTGTAGTGGCTTGACTCATAGTAATAGCAGGATCTTGAAGAGGATCTCAAATGGGGAACCCTaGGGGTCACTGGAAGATATG +
Preference number: 5 (lower is better)
Translates to: CGVCSGLTHSNSRILKRISNGEP*GSLEDM
Trigger: CATATCTTCCAGTGACCCCAAGGGTTCCCCATTTGA...GATCCTCTTCAAGATCCTGCTATTACTATGAGTCAAGCCACTACAGACACCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGAGTGAGAGTGTTCCCTCCACCTaGTTCTGTCTCCCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: LMQHDLEWACNLTSVLSESVPST*FCLPSP
Trigger: TGGACTGGGGAGACAGAACAAGGTGGAGGGAACACT...CTCACTCAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CAA 90 bp AGTAAAGCAAACAAAGGTAGACATCTACCCCCTTGGTTAAAAAGAAAGGCCTTCCCCACCAGAGAGGCATaGACTCCTATGCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: SKANKGRHLPPWLKRKAFPTREA*TPMPSP
Trigger: GGGAGATGGCATAGGAGTCAATGCCTCTCTGGTGGG...GAAGGCCTTTCTTTTTAACCAAGGGGGTAGATGTCTACCTTTGTTTGCTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CAA 90 bp TTCTGGTCAGGTGCCCCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACAAGATGCCCATTCAGTaGTATCATGGAGGCATTAAA +
Preference number: 5 (lower is better)
Translates to: FWSGAPSPHMYPHILPLNKMPIQ*YHGGIK
Trigger: TTTAATGCCTCCATGATACAACTGAATGGGCATCTT...GTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGGGGCACCTGACCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS-3UTR CAA 90 bp CCCAGTCCTCACATGTACCCACACATACTTCCCCTAAACCAAGCACACACACCAATACTCTTCGCTTTATaGCTCCATGAATTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: PSPHMYPHILPLNQAHTPILFAL*LHEFSV
Trigger: GACTGAGAATTCATGGAGCAATAAAGCGAAGAGTAT...TGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGTGGGTACATGTGAGGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGATTGTGGCTTTTGCTGTaGACAAATACTCTTCGCTTT +
Preference number: 5 (lower is better)
Translates to: QLGLLRPFLGGVIALCTRLWLLL*TNTLRF
Trigger: AAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACAA...TCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp GGTTGGCTTTATGAGGAGGAGTGGTGGGTGGAGTTAGGCCCAAATTCCTTCGTGGAAGAGATAAAGTTGTaGGTTTGGCTTGTAAGTGTT +
Preference number: 5 (lower is better)
Translates to: GWLYEEEWWVELGPNSFVEEIKL*VWLVSV
Trigger: AACACTTACAAGCCAAACCAACAACTTTATCTCTTC...CACGAAGGAATTTGGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513205.5
CDS-3UTR CAA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGAGGAAGAGATAAAGTaGTTGGTTTGGCTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSEEEIK*LVWLVS
Trigger: ACTTACAAGCCAAACCAACAACTTTATCTCTTCCTC...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp CACGGCATGAAGGCAATGGCCCACGGTCTTCTAAAAATCCTACAGATCTATGCTCCTAAAAGGGTTATCTaGGTTGGCTTTATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: HGMKAMAHGLLKILQIYAPKRVI*VGFMRR
Trigger: CCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGG...AGCATAGATCTGTAGGATTTTTAGAAGACCGTGGGCCATTGCCTTCATGCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp CTTTGGAGAAGCCCTAAAAGGGTTATCTTGGTTGGCTTTATGAGGAGGAGTGGTGGTGGAGTTATTGCCTaGTGTACCAGAAGACTCACT +
Preference number: 5 (lower is better)
Translates to: LWRSPKRVILVGFMRRSGGGVIA*CTRRLT
Trigger: AGTGAGTCTTCTGGTACACAAGGCAATAACTCCACC...ACCACTCCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGGGCTTCTCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAGTCGAGAAAAGGACCTaGAACGAGAGCGCATCCTTT +
Preference number: 5 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTVEKRT*NESASF
Trigger: AAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGAC...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTCACCAAAAACTTCAAAACGGTCCCTCAGTTCTGTCCGTGTTGTGTCAGGTCTTACTGCCTGGAGACCTaGATCTTGACCTGGAATATG +
Preference number: 5 (lower is better)
Translates to: FTKNFKTVPQFCPCCVRSYCLET*ILTWNM
Trigger: CATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTA...AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACATGGAACTGCTGCCATTaGAAATGGTTTGCCCTTGCG +
Preference number: 5 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTWNCCH*KWFALA
Trigger: CGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCA...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS TCA 90 bp AATGCACAAAGGCAACAGAGGGAAGGAAGTTATGTTGCAATATTCTaGAACATAAATCTTGCTACCAGCCGGTCCAGGGACGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: NAQRQQREGSYVAIF*NINLATSRSRDASC
Trigger: ACAGGATGCGTCCCTGGACCGGCTGGTAGCAAGATTTATGTTTCAGAATATTGCAACATAACTTCCTTCCCTCTGTTGCCTTTGTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514517.1
ENST00000613098.4
CDS CCA 90 bp CACCTCTGTCCCCTTCACTTTCAGAAGATAATCTTGATACCTTCTTaGTTCCTCAGAAGAGCATCTTCTCCAAGCTTACTTCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: HLCPLHFQKIILIPS*FLRRASSPSLLQVW
Trigger: CCACACCTGAAGTAAGCTTGGAGAAGATGCTCTTCTGAGGAACCAAGAAGGTATCAAGATTATCTTCTGAAAGTGAAGGGGACAGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS-3UTR CAA 90 bp TCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCAGAAGACTCACTGTACATACTCTTCGCTTTATaGCTCCATGAATTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: SGPFLVELLPCVPEDSLYILFAL*LHEFSV
Trigger: GACTGAGAATTCATGGAGCAATAAAGCGAAGAGTAT...GTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp TACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTACCATTGTGGCTTTTGCTGTaGACAAATACTCTTCGCTTT +
Preference number: 5 (lower is better)
Translates to: YNSDCSGPFLVELLPCVPLWLLL*TNTLRF
Trigger: AAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACAA...TGGTACACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGCGAGCAGGGACGTCTTaGTGGCTTTTGCTGTTGACA +
Preference number: 5 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLRAGTS*WLLLLT
Trigger: TGTCAACAGCAAAAGCCACAAAGACGTCCCTGCTCG...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TTATTGCCTTGTGTACCAGAAGACTCACTGTACCTGGGCTTCTTTGATGGTGGTTTTTTGGAGGTGCATTaGTCTCTGCTGCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LLPCVPEDSLYLGFFDGGFLEVH*SLLLFL
Trigger: CAGAAACAGCAGCAGAGACAAATGCACCTCCAAAAA...ACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000513205.5
CDS-3UTR CAA 90 bp ATGACCGAAGTGCTTGTTCAGCTCGGCTCGGATTTCCTGGTCTTGGAGCTGTTTGAAGAGATAAAGTTGTaGGTTTGGCTTGTAAGTGTT +
Preference number: 5 (lower is better)
Translates to: MTEVLVQLGSDFLVLELFEEIKL*VWLVSV
Trigger: AACACTTACAAGCCAAACCAACAACTTTATCTCTTC...AAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAGCACTTCGGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp GAATACACACTCCAAATGTTACTGAATTCCATTCCAGGGACTCCACACTCAGATGGCTGTAGGGCGATCTaGAACGTGATCTCACATACA +
Preference number: 5 (lower is better)
Translates to: EYTLQMLLNSIPGTPHSDGCRAI*NVISHT
Trigger: TGTATGTGAGATCACGTTCAAGATCGCCCTACAGCC...ATCTGAGTGTGGAGTCCCTGGAATGGAATTCAGTAACATTTGGAGTGTGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGTGCCTCTCCCTTTGCTaGGCCCTCTCAGACTCTCGC +
Preference number: 5 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELCLSLC*ALSDSR
Trigger: GCGAGAGTCTGAGAGGGCCAAGCAAAGGGAGAGGCA...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TGTACCTGGGCTTCTTTGATGGTGGTGGCACCACAGTCTTGCAAGAGGACTTCAGTTAGACTTGAAAAATaGCTTGCGTCCACAAAAGTA +
Preference number: 5 (lower is better)
Translates to: CTWASLMVVAPQSCKRTSVRLEK*LASTKV
Trigger: TACTTTTGTGGACGCAAGCAATTTTTCAAGTCTAAC...TGAAGTCCTCTTGCAAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp GAATACACACTCCAAATGTTACTGAATTCCATTCCAGGGACTCCACACTCAGATTGGAACTGCTGCCATTaGAAATGGTTTGCCCTTGCG +
Preference number: 5 (lower is better)
Translates to: EYTLQMLLNSIPGTPHSDWNCCH*KWFALA
Trigger: CGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCA...ATCTGAGTGTGGAGTCCCTGGAATGGAATTCAGTAACATTTGGAGTGTGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAGAACAAGCTGCACGCTaGACCATTGACAAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTEQAAR*TIDKAF
Trigger: AAAAGCCTTGTCAATGGTCAAGCGTGCAGCTTGTTC...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp GTGCATACAACTCGGATTGCTCCGGCCCTTTCTTGGTGGAGTTATTGCCTTGTGTTTATAAAAACAAATTaGGTGACTCTGGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: VHTTRIAPALSWWSYCLVFIKTN*VTLGSE
Trigger: CTCTGACCCCAGAGTCACCAAATTTGTTTTTATAAA...CACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS TCA 90 bp AACAATGTGGTCTTTAATGTTCAGCTTTTTATCTGCTTTGTGTGTTaGTTCCATCCAGAGGTGAGTCATCTGCTGGGCTGTGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: NNVVFNVQLFICFVC*FHPEVSHLLGCASR
Trigger: CCTGGAAGCACAGCCCAGCAGATGACTCACCTCTGGATGGAATCAACACACAAAGCAGATAAAAAGCTGAACATTAAAGACCACATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505469.1
ENST00000509642.5
ENST00000512169.1
CDS TCA 90 bp TCCCTGAAATGCTGCTTTGGTAGAAGCAACACAAACCTGTGGCCATaGAAGAGTTATCTGGTTTCATACGAACCTTCTTCACAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: SLKCCFGRSNTNLWP*KSYLVSYEPSSQGR
Trigger: TCTTCCCTGTGAAGAAGGTTCGTATGAAACCAGATAACTCTTTCATGGCCACAGGTTTGTGTTGCTTCTACCAAAGCAGCATTTCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514517.1
CDS GCA 90 bp CCTCAGAAGAGCATCTTCTCCAAGCTTACTTCAGGTGTGGCCATCTaGATAATTAGCATATTTATCTCCCTAATCCTCCCAGATTCTAGG +
Preference number: 5 (lower is better)
Translates to: PQKSIFSKLTSGVAI*IISIFISLILPDSR
Trigger: CCTAGAATCTGGGAGGATTAGGGAGATAAATATGCTAATTATGCAGATGGCCACACCTGAAGTAAGCTTGGAGAAGATGCTCTTCTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS-3UTR CAA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCGAAGGACTAGCCTCATaGTCAGTGGTCACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFEGLAS*SVVTSP
Trigger: TGGAGACGTGACCACTGACAATGAGGCTAGTCCTTC...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTCAAATGGGGAACCCTaGGGGTCATTTGGTGACTCT +
Preference number: 5 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLSNGEP*GSFGDS
Trigger: AGAGTCACCAAATGACCCCAAGGGTTCCCCATTTGA...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCC +
Preference number: 5 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHVRSIV*FSNGEP
Trigger: GGGTTCCCCATTTGAGAACAAGACTATTGAACGCAC...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATGGTGGAGTTATTGCCTaGTGTACCAGAAGACTCACT +
Preference number: 5 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHGGVIA*CTRRLT
Trigger: AGTGAGTCTTCTGGTACACAAGGCAATAACTCCACC...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGGTGAGGACTGAGGACTaGCTGAGTTGTGCATACAAC +
Preference number: 5 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLVRTED*LSCAYN
Trigger: GTTGTATGCACAACTCAGCAAGTCCTCAGTCCTCAC...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTTCGGATTTCCTGGTCTaGGAGCTGTTTTCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLISDFLV*ELFSCA
Trigger: AGCACAAGAAAACAGCTCCAAGACCAGGAAATCCGA...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS TCA 90 bp CTTTGCTTAGATTTATTGCTATGCTGCCCACTGTACATTGTAGCTTaGAGCTATTTAGTTCACGTTCATCAGCCTCTCAGGCAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LCLDLLLCCPLYIVA*SYLVHVHQPLRQAA
Trigger: AGCTGCTTGCCTGAGAGGCTGATGAACGTGAACTAAATAGCTTCAAGCTACAATGTACAGTGGGCAGCATAGCAATAAATCTAAGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503714.1
CDS-3UTR CAA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGAAGAGATAAAGTTGTaGGTTTGGCTTGTAAGTGTT +
Preference number: 5 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQEEIKL*VWLVSV
Trigger: AACACTTACAAGCCAAACCAACAACTTTATCTCTTC...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATTTTCAAGAGCAGCAAAAGCATCACAGGTATAACGGTAGGTAATGAAACCATATGCTCCGGCCCTTTCTaGGTGGAGTTATTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: IFKSSKSITGITVGNETICSGPF*VELLPC
Trigger: ACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCA...TATGGTTTCATTACCTACCGTTATACCTGTGATGCTTTTGCTGCTCTTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TCTTCATGGAACTGCTGCCATTTGAAATGGTTTGCCCTTGCGCATTCTGGTCAGGTTAGACTTGAAAAATaGCTTGCGTCCACAAAAGTA +
Preference number: 5 (lower is better)
Translates to: SSWNCCHLKWFALAHSGQVRLEK*LASTKV
Trigger: TACTTTTGTGGACGCAAGCAATTTTTCAAGTCTAAC...CTGACCAGAATGCGCAAGGGCAAACCATTTCAAATGGCAGCAGTTCCATGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTGCGGAAAGCATCATTTaGCTCTTGTTGCACTCAACA +
Preference number: 5 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLIAESII*LLLHST
Trigger: TGTTGAGTGCAACAAGAGCAAAATGATGCTTTCCGC...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp AGTAAAGCAAACAAAGGTAGACATCTACCCCCTTGGTTAAAAAGAAAGGCCTTCGAATGGGCCTGTAACTaGACAAGTGTACTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: SKANKGRHLPPWLKRKAFEWACN*TSVLSE
Trigger: CTCACTCAGTACACTTGTCAAGTTACAGGCCCATTC...GAAGGCCTTTCTTTTTAACCAAGGGGGTAGATGTCTACCTTTGTTTGCTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS TCA 90 bp TGTTGTACTGATTGGATATTATTTCTGATTGGTCACTGCACCACTTaGGTCCACCCAGAAAGCTGTCTGTATCCAAGTCGTTCACATCTA +
Preference number: 5 (lower is better)
Translates to: CCTDWILFLIGHCTT*VHPESCLYPSRSHL
Trigger: TAGATGTGAACGACTTGGATACAGACAGCTTTCTGGGTGGACTCAAGTGGTGCAGTGACCAATCAGAAATAATATCCAATCAGTACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264867.7
ENST00000503714.1
ENST00000506055.5
ENST00000507342.5
ENST00000507380.1
ENST00000513205.5
ENST00000514494.1
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS TCA 90 bp ATTAAAGCAGGTGTTAAAATAAACCAGGGACAAGGTTGCCCACAGTaGCCCAGAAAGGCCAATATGCTATTTAAACTAACCCCATGCCAT +
Preference number: 5 (lower is better)
Translates to: IKAGVKINQGQGCPQ*PRKANMLFKLTPCH
Trigger: ATGGCATGGGGTTAGTTTAAATAGCATATTGGCCTTTCTGGGTCACTGTGGGCAACCTTGTCCCTGGTTTATTTTAACACCTGCTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS CCA 90 bp GCTTTGGTAGAAGCAACACAAACCTGTGGCCATGAAAGAGTTATCTaGTTTCATACGAACCTTCTTCACAGGGAAGACCCAATTTTAGAA +
Preference number: 5 (lower is better)
Translates to: ALVEATQTCGHERVI*FHTNLLHREDPILE
Trigger: TTCTAAAATTGGGTCTTCCCTGTGAAGAAGGTTCGTATGAAACCAGATAACTCTTTCATGGCCACAGGTTTGTGTTGCTTCTACCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514517.1
CDS-3UTR CAA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGGGACTGCTAGCAAGTTaGCCTCATTCTCTTCATCTA +
Preference number: 5 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLGLLAS*PHSLHL
Trigger: TAGATGAAGAGAATGAGGCAAACTTGCTAGCAGTCC...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGCGAGCAGGGACGTCTTaGTGGCTTTTGCTGTTGACA +
Preference number: 5 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELRAGTS*WLLLLT
Trigger: TGTCAACAGCAAAAGCCACAAAGACGTCCCTGCTCG...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTCTTGGTGGAGTTATaGCCTTGTGTACCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLFLVEL*PCVPED
Trigger: GTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGTGCTCCGGCCCTTTCTaGGTGGAGTTATTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELCSGPF*VELLPC
Trigger: ACAAGGCAATAACTCCACCAAGAAAGGGCCGGAGCA...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCTCGGATTTCCTGGTCTaGGAGCTGTTTTCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFSDFLV*ELFSCA
Trigger: AGCACAAGAAAACAGCTCCAAGACCAGGAAATCCGA...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGAGTAATAGCAGGATCTaGAAGAGGATCTACTGCCTG +
Preference number: 5 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLSNSRI*KRIYCL
Trigger: CAGGCAGTAGATCCTCTTCAAGATCCTGCTATTACT...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTACAAAGTCAGTTTCGTTaGACCTGCGCAAAGTGTATC +
Preference number: 5 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLQSQFR*TCAKCI
Trigger: GATACACTTTGCGCAGGTCAAACGAAACTGACTTTG...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp CCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTGTTGTTGTTGTTCAGCACAGCTTACATTTaGATGGGCTACCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: PLQQLCSCKPLLLLLLLFSTAYI*MGYPQC
Trigger: ACACTGTGGGTAGCCCATCAAAATGTAAGCTGTGCT...GAACAACAACAACAATAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS CCA 90 bp CTCTTCATCTATCTTCTTGTTAGATGTGAAGTCTGGGATAGGGAATaGTGGAGGAACAATTTGGCTCTCTGCTTTAACAATGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LFIYLLVRCEVWDRE*WRNNLALCFNNVVF
Trigger: AAAGACCACATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACATCTAACAAGAAGATAGATGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509642.5
ENST00000512169.1
CDS CCA 90 bp TTGTTGGTTTGGCTCCTACAGGAGGCATTTCCCAATAATGAAGGGTaGATTAAGAATCTTCTCACCCAAAATTTCAATTGCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLVWLLQEAFPNNEG*IKNLLTQNFNCFSV
Trigger: CACAGAGAAGCAATTGAAATTTTGGGTGAGAAGATTCTTAATCCACCCTTCATTATTGGGAAATGCCTCCTGTAGGAGCCAAACCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS-3UTR CAA 90 bp CATTTTGATGGGCTACCCACAGTGTCTGCAGAAGATACAAAAGCTCCACTAATTATACTCTTCGCTTTATaGCTCCATGAATTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: HFDGLPTVSAEDTKAPLIILFAL*LHEFSV
Trigger: GACTGAGAATTCATGGAGCAATAAAGCGAAGAGTAT...AATTAGTGGAGCTTTTGTATCTTCTGCAGACACTGTGGGTAGCCCATCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp ACACATACTTCCCCTAAACCAAGCACACACACCACACACATACATACACACACAGAAGAGATAAAGTTGTaGGTTTGGCTTGTAAGTGTT +
Preference number: 5 (lower is better)
Translates to: THTSPKPSTHTTHIHTHTEEIKL*VWLVSV
Trigger: AACACTTACAAGCCAAACCAACAACTTTATCTCTTC...TGTGTGTGTATGTATGTGTGTGGTGTGTGTGCTTGGTTTAGGGGAAGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp TGCAGAAGATACAAAAGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGGTGGAGTTATTGCCTaGTGTACCAGAAGACTCACT +
Preference number: 5 (lower is better)
Translates to: CRRYKSSTNSRCNLKSIEGGVIA*CTRRLT
Trigger: AGTGAGTCTTCTGGTACACAAGGCAATAACTCCACC...CTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCTTTTGTATCTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp AGCTCCACTAATTCTAGATGCAATTTGAAGTCCATTGAGGAAAACTATCTTCATCTTGGAGCTGTTTTCTaGTGCTGCAAGGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: SSTNSRCNLKSIEENYLHLGAVF*CCKERP
Trigger: AGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAG...ATGAAGATAGTTTTCCTCAATGGACTTCAAATTGCATCTAGAATTAGTGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGGTCGTCAAAAACAGCTaGACTGGGATGACCGAAGTG +
Preference number: 5 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELVVKNS*TGMTEV
Trigger: CACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGAC...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp AAGGATTTGGGTGGTGACACAGAATCTCTACATGGAGAGTTAAAAGAAGAACAAAGTAATAGCAGGATCTaGAAGAGGATCTACTGCCTG +
Preference number: 5 (lower is better)
Translates to: KDLGGDTESLHGELKEEQSNSRI*KRIYCL
Trigger: CAGGCAGTAGATCCTCTTCAAGATCCTGCTATTACT...TTGTTCTTCTTTTAACTCTCCATGTAGAGATTCTGTGTCACCACCCAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp TCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGTTATTTGTGGTTGGTTGGTaGGTTGGTTGGTTGTTAGTT +
Preference number: 5 (lower is better)
Translates to: SFCLLPLQQLCSCKPLLLFVVGW*VGWLLV
Trigger: AACTAACAACCAACCAACCAACCAACCAACCACAAA...TAACAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp TTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGAGTGAGATGAGGTACCATTTATaGCTCATTCTTTCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: LMQHDLEWACNLTSVLSEMRYHL*LILSVG
Trigger: TCCCACAGAAAGAATGAGCAATAAATGGTACCTCAT...CTCACTCAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS GCA 90 bp TGTGAAGTCTGGGATAGGGAATGGTGGAGGAACAATTTGGCTCTCTaGTTTAACAATGTGGTCTTTAATGTTCAGCTTTTTATCTGCTTT +
Preference number: 5 (lower is better)
Translates to: CEVWDREWWRNNLAL*FNNVVFNVQLFICF
Trigger: AAAGCAGATAAAAAGCTGAACATTAAAGACCACATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505469.1
ENST00000509642.5
ENST00000512169.1
CDS CCA 90 bp GGACAAATTAACCTTGTTAGATGTGAAGTCTGGGATAGGGAATGGTaGAGGAACAATTTGGCTCTCTGCTTTAACAATGTGGTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: GQINLVRCEVWDREW*RNNLALCFNNVVFN
Trigger: ATTAAAGACCACATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACATCTAACAAGGTTAATTTGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505469.1
CDS-3UTR CAA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGTTTGTGGTCAGATATTaGAGAAGCTCCGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELFVVRY*RSSEQG
Trigger: TCCCTGCTCGGAGCTTCTCAAATATCTGACCACAAA...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp ATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATTGTTGGAGGAAGAGATAAAGTaGTTGGTTTGGCTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: ISFCLLPLQQLCSCKPLLEEEIK*LVWLVS
Trigger: ACTTACAAGCCAAACCAACAACTTTATCTCTTCCTC...CAACAATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp AAGATCAACATTTTGGACATTTACATGGGTGTCAGGATTAAGGATGAACTACAGTTCTTGGTGGAGTTATaGCCTTGTGTACCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: KINILDIYMGVRIKDELQFLVEL*PCVPED
Trigger: GTCTTCTGGTACACAAGGCAATAACTCCACCAAGAA...CTGTAGTTCATCCTTAATCCTGACACCCATGTAAATGTCCAAAATGTTGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp ACTGGATATCATTCTGTCTCTTGCCTCTTCAGCAGCTGTGTTCATGTAAACCATGTTAGACTTGAAAAATaGCTTGCGTCCACAAAAGTA +
Preference number: 5 (lower is better)
Translates to: TGYHSVSCLFSSCVHVNHVRLEK*LASTKV
Trigger: TACTTTTGTGGACGCAAGCAATTTTTCAAGTCTAAC...ATGGTTTACATGAACACAGCTGCTGAAGAGGCAAGAGACAGAATGATATCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp AGAGCTCACCTAATTAGTAAAGCAAACAAAGGTAGACATCTACCCCCTTGGTTAGAGCAAAGAAGCAGCTaGATATGTCTTTGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: RAHLISKANKGRHLPPWLEQRSS*ICLCKG
Trigger: TCCTTTACAAAGACATATCAAGCTGCTTCTTTGCTC...TAACCAAGGGGGTAGATGTCTACCTTTGTTTGCTTTACTAATTAGGTGAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS TCA 90 bp AAGGATGTCCTTACCTCAAATATGTTTGAAGGCTCATTGTTGTACTaGTTGGATATTATTTCTGATTGGTCACTGCACCACTTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: KDVLTSNMFEGSLLY*LDIISDWSLHHLSP
Trigger: TGGACTCAAGTGGTGCAGTGACCAATCAGAAATAATATCCAATCAGTACAACAATGAGCCTTCAAACATATTTGAGGTAAGGACATCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507380.1
ENST00000514494.1
CDS TCA 90 bp TCGCCTTTCTTTACCTCAAATATGTTTGAAGGCTCATTGTTGTACTaGTTGGATATTATTTCTGATTGGTCACTGCACCACTTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: SPFFTSNMFEGSLLY*LDIISDWSLHHLSP
Trigger: TGGACTCAAGTGGTGCAGTGACCAATCAGAAATAATATCCAATCAGTACAACAATGAGCCTTCAAACATATTTGAGGTAAAGAAAGGCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515534.5
CDS CCA 90 bp TTGTTAGATGTGAAGTCTGGGATAGGGAATGGTGGAGGAACAATTTaGCTCTCTGCTTTAACAATGTGGTCTTTAATGTTCAGCTTTTTA +
Preference number: 5 (lower is better)
Translates to: LLDVKSGIGNGGGTI*LSALTMWSLMFSFL
Trigger: TAAAAAGCTGAACATTAAAGACCACATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACATCTAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505469.1
ENST00000509642.5
ENST00000512169.1
CDS CCA 90 bp TTCATCTATCTTCTTGTTAGATGTGAAGTCTGGGATAGGGAATGGTaGAGGAACAATTTGGCTCTCTGCTTTAACAATGTGGTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: FIYLLVRCEVWDREW*RNNLALCFNNVVFN
Trigger: ATTAAAGACCACATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACATCTAACAAGAAGATAGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509642.5
ENST00000512169.1
CDS-3UTR CAA 90 bp AAGGATTTGGGTGGTGACACAGAATCTCTACATGGAGAGTTAAAAGAAGAACAAATACTCTTCGCTTTATaGCTCCATGAATTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: KDLGGDTESLHGELKEEQILFAL*LHEFSV
Trigger: GACTGAGAATTCATGGAGCAATAAAGCGAAGAGTAT...TTGTTCTTCTTTTAACTCTCCATGTAGAGATTCTGTGTCACCACCCAAATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506055.5
CDS-3UTR CAA 90 bp ATAGAATACGAACATTTTGAAGTTCTAGGTTTTAAGCGTGTCTTCATGGAACTGCCTAAAAGGGTTATCTaGGTTGGCTTTATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: IEYEHFEVLGFKRVFMELPKRVI*VGFMRR
Trigger: CCTCCTCATAAAGCCAACCAAGATAACCCTTTTAGG...CAGTTCCATGAAGACACGCTTAAAACCTAGAACTTCAAAATGTTCGTATTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264867.7
ENST00000613098.4
CDS-3UTR CAA 90 bp AAGATCAACATTTTGGACATTTACATGGGTGTCAGGATTAAGGATGAACTACAGATCATTTTGCTCTTGTaGCACTCAACAGACACACAC +
Preference number: 5 (lower is better)
Translates to: KINILDIYMGVRIKDELQIILLL*HSTDTH
Trigger: GTGTGTGTCTGTTGAGTGCAACAAGAGCAAAATGAT...CTGTAGTTCATCCTTAATCCTGACACCCATGTAAATGTCCAAAATGTTGATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264867.7
CDS-3UTR CAA 90 bp AGAGCTCACCTAATTAGTAAAGCAAACAAAGGTAGACATCTACCCCCTTGGTTACTTCGTTTAATTCACTaGCCAGAGTACTCACTAAAT +
Preference number: 5 (lower is better)
Translates to: RAHLISKANKGRHLPPWLLRLIH*PEYSLN
Trigger: ATTTAGTGAGTACTCTGGCAAGTGAATTAAACGAAG...TAACCAAGGGGGTAGATGTCTACCTTTGTTTGCTTTACTAATTAGGTGAGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS-3UTR CAA 90 bp GTTTATTTAATGCAGCATGACTTAGAATGGGCCTGTAACTTGACAAGTGTACTGTGTCAACTGTGTGATTaGGGGAAAACAAATAACCTC +
Preference number: 5 (lower is better)
Translates to: VYLMQHDLEWACNLTSVLCQLCD*GKTNNL
Trigger: GAGGTTATTTGTTTTCCCCAAATCACACAGTTGACA...CAGTACACTTGTCAAGTTACAGGCCCATTCTAAGTCATGCTGCATTAAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507380.1
CDS TCA 90 bp TCTTCATCTATCTTCTCAAATATGTTTGAAGGCTCATTGTTGTACTaGTTGGATATTATTTCTGATTGGTCACTGCACCACTTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: SSSIFSNMFEGSLLY*LDIISDWSLHHLSP
Trigger: TGGACTCAAGTGGTGCAGTGACCAATCAGAAATAATATCCAATCAGTACAACAATGAGCCTTCAAACATATTTGAGAAGATAGATGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507342.5
ENST00000513205.5
ENST00000612355.1
ENST00000617484.4
CDS TCA 90 bp TACCATTATATCACCTCAAATATGTTTGAAGGCTCATTGTTGTACTaGTTGGATATTATTTCTGATTGGTCACTGCACCACTTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: YHYITSNMFEGSLLY*LDIISDWSLHHLSP
Trigger: TGGACTCAAGTGGTGCAGTGACCAATCAGAAATAATATCCAATCAGTACAACAATGAGCCTTCAAACATATTTGAGGTGATATAATGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503714.1
CDS CAA 90 bp TGGGGTGGAGGGGTGCCGTCAGGCATGGAGGAAGGACTAGCCTCATaGTCAGTGGTCACGTCTCCATCTGTCAGCGCATCAAATGAGGGC +
Preference number: 6 (lower is better)
Translates to: WGGGVPSGMEEGLAS*SVVTSPSVSASNEG
Trigger: GCCCTCATTTGATGCGCTGACAGATGGAGACGTGACCACTGACAATGAGGCTAGTCCTTCCTCCATGCCTGACGGCACCCCTCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000508380.1
ENST00000509642.5
ENST00000509702.5
ENST00000512169.1
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS CAA 72 bp GGGGTGCCGTCAGGCATGGAGGAAGGACTAGCCTCATaGTCAGTGGTCACGTCTCCATCTGTCAGCGCATCA +
Preference number: 6 (lower is better)
Translates to: GVPSGMEEGLAS*SVVTSPSVSAS
Trigger: TGATGCGCTGACAGATGGAGACGTGACCACTGACAATGAGGCTAGTCCTTCCTCCATGCCTGACGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000508380.1
ENST00000509642.5
ENST00000509702.5
ENST00000512169.1
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS TCA 72 bp CCTCCCTTCCCCTGTGCAGCTTGCTGCTCTAACTCGTaGCGTCACTCAAAGGCAGCCCTCTGCTTCAGTGAA +
Preference number: 6 (lower is better)
Translates to: PPFPCAACCSNS*RHSKAALCFSE
Trigger: TTCACTGAAGCAGAGGGCTGCCTTTGAGTGACGTCACGAGTTAGAGCAGCAAGCTGCACAGGGGAAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507342.5
CDS CCA 72 bp AGTGCAGGTGAAAAGTCCACTGTGAGTGGCCGGCCCTaGGAAGGCACTTCCCTGAAATGCTGCTTTGGTAGA +
Preference number: 6 (lower is better)
Translates to: SAGEKSTVSGRP*EGTSLKCCFGR
Trigger: TCTACCAAAGCAGCATTTCAGGGAAGTGCCTTCCCAGGGCCGGCCACTCACAGTGGACTTTTCACCTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514517.1
CDS CAA 90 bp AGAGCAGCACACTCGATGTCACTCCATACAGACTCAGAGTCCTGGTaGCACATGTCCCACGCCATCCAGCTCCTGAATGACGCCAGTCAA +
Preference number: 6 (lower is better)
Translates to: RAAHSMSLHTDSESW*HMSHAIQLLNDASQ
Trigger: TTGACTGGCGTCATTCAGGAGCTGGATGGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGTATGGAGTGACATCGAGTGTGCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507380.1
ENST00000513205.5
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS TCA 72 bp GTCAGTGGTCACGTCTCCATCTGTCAGCGCATCAAATaGGGGCAATCCGTCTTCATCCACAGGGAGACTGTC +
Preference number: 6 (lower is better)
Translates to: VSGHVSICQRIK*GQSVFIHRETV
Trigger: GACAGTCTCCCTGTGGATGAAGACGGATTGCCCTCATTTGATGCGCTGACAGATGGAGACGTGACCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000508380.1
ENST00000509642.5
ENST00000509702.5
ENST00000512169.1
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS CCA 72 bp GCACACTCGATGTCACTCCATACAGACTCAGAGTCCTaGTTGCACATGTCCCACGCCATCCAGCTCCTGAAT +
Preference number: 6 (lower is better)
Translates to: AHSMSLHTDSES*LHMSHAIQLLN
Trigger: ATTCAGGAGCTGGATGGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGTATGGAGTGACATCGAGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507380.1
ENST00000513205.5
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS CCA 72 bp GAAAGATCAAGTTCAGGAAGATCTGGGCAAAGAGGCTaGTCTTCACCAACCAGAGCAGCACACCAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: ERSSSGRSGQRG*SSPTRAAHQPP
Trigger: GGGAGGCTGGTGTGCTGCTCTGGTTGGTGAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTTGATCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507342.5
CDS CAA 72 bp CACTCGATGTCACTCCATACAGACTCAGAGTCCTGGTaGCACATGTCCCACGCCATCCAGCTCCTGAATGAC +
Preference number: 6 (lower is better)
Translates to: HSMSLHTDSESW*HMSHAIQLLND
Trigger: GTCATTCAGGAGCTGGATGGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGTATGGAGTGACATCGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507380.1
ENST00000513205.5
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS TCA 72 bp CTGGTTGCACATGTCCCACGCCATCCAGCTCCTGAATaGCGCCAGTCAAGCTTTTTCAACTCCAATCCACAG +
Preference number: 6 (lower is better)
Translates to: LVAHVPRHPAPE*RQSSFFNSNPQ
Trigger: CTGTGGATTGGAGTTGAAAAAGCTTGACTGGCGTCATTCAGGAGCTGGATGGCGTGGGACATGTGCAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507380.1
ENST00000513205.5
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS TCA 72 bp AGTCCTGGTTGCACATGTCCCACGCCATCCAGCTCCTaGATGACGCCAGTCAAGCTTTTTCAACTCCAATCC +
Preference number: 6 (lower is better)
Translates to: SPGCTCPTPSSS*MTPVKLFQLQS
Trigger: GGATTGGAGTTGAAAAAGCTTGACTGGCGTCATTCAGGAGCTGGATGGCGTGGGACATGTGCAACCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507380.1
ENST00000513205.5
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS TCA 72 bp TTCAGGCTTCCTGAGAGTTCCAGCAATGACCAAACATaGACGCTGGCTACAGCTGTGAGAGTCCTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: FRLPESSSNDQT*TLATAVRVLLP
Trigger: GGGGAGAAGGACTCTCACAGCTGTAGCCAGCGTTCATGTTTGGTCATTGCTGGAACTCTCAGGAAGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS CAA 90 bp CCTGCAGTTCCAGAGAGTTCCACACTTAAGGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCCTTGGGGTCATTTGGTGACTCTGGG +
Preference number: 6 (lower is better)
Translates to: PAVPESSTLKVRSIV*FSNGEPLGSFGDSG
Trigger: CCCAGAGTCACCAAATGACCCCAAGGGTTCCCCATTTGAGAACAAGACTATTGAACGCACCTTAAGTGTGGAACTCTCTGGAACTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264867.7
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000613098.4
ENST00000617484.4
CDS TCA 72 bp TGGTGTGAGGAGGGTCATCGTTTGTGGTCAGATATTTaGGAAGCTCCGAGCAGGGACGTCTTTGTGGCTTTT +
Preference number: 6 (lower is better)
Translates to: WCEEGHRLWSDI*EAPSRDVFVAF
Trigger: AAAAGCCACAAAGACGTCCCTGCTCGGAGCTTCTCAAATATCTGACCACAAACGATGACCCTCCTCACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS CCA 72 bp GAAAGATCAAGTTCAGGAAGATCTGGGCAAAGAGGCTaGTCTTCACCAACCAGAGCAGCACACTCGATGTCA +
Preference number: 6 (lower is better)
Translates to: ERSSSGRSGQRG*SSPTRAAHSMS
Trigger: TGACATCGAGTGTGCTGCTCTGGTTGGTGAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTTGATCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000507380.1
ENST00000513205.5
ENST00000515534.5
ENST00000612355.1
ENST00000617484.4
CDS TCA 72 bp CGTCTTCATCCACAGGGAGACTGTCTAGTGTCTCTGTaGGGACTGCTAGCAAGTTTGCCTCATTCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: RLHPQGDCLVSL*GLLASLPHSLH
Trigger: ATGAAGAGAATGAGGCAAACTTGCTAGCAGTCCTCACAGAGACACTAGACAGTCTCCCTGTGGATGAAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000508380.1
ENST00000509642.5
ENST00000509702.5
ENST00000512169.1
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS GCA 72 bp TTTAACACTAGAGGGCAAAGAGTGGAGGTGTCCTCATaGCATGCAAATACTCCTGAAGCTGCTGCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: FNTRGQRVEVSS*HANTPEAAAVG
Trigger: ACCAACAGCAGCAGCTTCAGGAGTATTTGCATGGCATGAGGACACCTCCACTCTTTGCCCTCTAGTGTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509642.5
ENST00000512169.1
CDS TCA 72 bp TCTCTGCTGCTGTTTCTGTTCTCTGTGGGTTTGGTGTaGGGAGGGTCATCGTTTGTGGTCAGATATTTGAGA +
Preference number: 6 (lower is better)
Translates to: SLLLFLFSVGLV*GGSSFVVRYLR
Trigger: TCTCAAATATCTGACCACAAACGATGACCCTCCTCACACCAAACCCACAGAGAACAGAAACAGCAGCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS CAA 72 bp CCAGAGAGTTCCACACTTAAGGTGCGTTCAATAGTCTaGTTCTCAAATGGGGAACCCTTGGGGTCATTTGGT +
Preference number: 6 (lower is better)
Translates to: PESSTLKVRSIV*FSNGEPLGSFG
Trigger: ACCAAATGACCCCAAGGGTTCCCCATTTGAGAACAAGACTATTGAACGCACCTTAAGTGTGGAACTCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264867.7
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000613098.4
ENST00000617484.4
CDS CAA 72 bp CATTTGGTGACTCTGGGGTCAGAGGAAGAGATAAAGTaGTTGGTTTGGCTCCTACAGGAGGCATTTCCCAAT +
Preference number: 6 (lower is better)
Translates to: HLVTLGSEEEIK*LVWLLQEAFPN
Trigger: ATTGGGAAATGCCTCCTGTAGGAGCCAAACCAACAACTTTATCTCTTCCTCTGACCCCAGAGTCACCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS CCA 72 bp GAAGCAACACAAACCTGTGGCCATGAAAGAGTTATCTaGTTTCATACGAACCTTCTTCACAGGGAAGACCCA +
Preference number: 6 (lower is better)
Translates to: EATQTCGHERVI*FHTNLLHREDP
Trigger: TGGGTCTTCCCTGTGAAGAAGGTTCGTATGAAACCAGATAACTCTTTCATGGCCACAGGTTTGTGTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514517.1
CDS CAA 72 bp CATTTGGTGACTCTGGGGTCAGAGGAAGAGATAAAGTaGTTGGTTTGGCTTGTAAGTGTTGTGACTGCGACT +
Preference number: 6 (lower is better)
Translates to: HLVTLGSEEEIK*LVWLVSVVTAT
Trigger: AGTCGCAGTCACAACACTTACAAGCCAAACCAACAACTTTATCTCTTCCTCTGACCCCAGAGTCACCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264867.7
ENST00000509642.5
ENST00000513205.5
ENST00000613098.4
ENST00000617484.4
CDS CAA 90 bp GCTTTGCTTAGATTTATTGCTATGCTGCCCACTGTACATTGTAGCTaGAAGCTATTTAGTTCACGTTCATCAGCCTCTCAGGCAAGCAGC +
Preference number: 6 (lower is better)
Translates to: ALLRFIAMLPTVHCS*KLFSSRSSASQASS
Trigger: GCTGCTTGCCTGAGAGGCTGATGAACGTGAACTAAATAGCTTCAAGCTACAATGTACAGTGGGCAGCATAGCAATAAATCTAAGCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503714.1
CDS CAA 90 bp TCACCTCTGTCCCCTTCACTTTCAGAAGATAATCTTGATACCTTCTaGGTTCCTCAGAAGAGCATCTTCTCCAAGCTTACTTCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: SPLSPSLSEDNLDTF*VPQKSIFSKLTSGV
Trigger: CACACCTGAAGTAAGCTTGGAGAAGATGCTCTTCTGAGGAACCAAGAAGGTATCAAGATTATCTTCTGAAAGTGAAGGGGACAGAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS GCA 72 bp GATAAAGTTGTTGGTTTGGCTTGTAAGTGTTGTGACTaGGACTGTGTGTGGGACTTCTTTTTGGAGGTGCAT +
Preference number: 6 (lower is better)
Translates to: DKVVGLACKCCD*DCVWDFFLEVH
Trigger: ATGCACCTCCAAAAAGAAGTCCCACACACAGTCGCAGTCACAACACTTACAAGCCAAACCAACAACTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000513205.5
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4
CDS CCA 72 bp GAAAGATCAAGTTCAGGAAGATCTGGGCAAAGAGGCTaGTCTTCACCAACCAGAGCAGCACATTTCAAAATT +
Preference number: 6 (lower is better)
Translates to: ERSSSGRSGQRG*SSPTRAAHFKI
Trigger: AATTTTGAAATGTGCTGCTCTGGTTGGTGAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTTGATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514494.1
CDS CAA 72 bp AATTTGGTGACTCTGGGGTCAGAGGAAGAGATAAAGTaGTTGGTTTGGCTTGTAAGTGTTGTGACTGCGACT +
Preference number: 6 (lower is better)
Translates to: NLVTLGSEEEIK*LVWLVSVVTAT
Trigger: AGTCGCAGTCACAACACTTACAAGCCAAACCAACAACTTTATCTCTTCCTCTGACCCCAGAGTCACCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506055.5
ENST00000612355.1
CDS TCA 72 bp GTCTTTAATGTTCAGCTTTTTATCTGCTTTGTGTGTTaGTTCCATCCAGAGGTGAGTCATCTGCTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: VFNVQLFICFVC*FHPEVSHLLGC
Trigger: ACAGCCCAGCAGATGACTCACCTCTGGATGGAATCAACACACAAAGCAGATAAAAAGCTGAACATTAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505469.1
ENST00000509642.5
ENST00000512169.1
CDS TCA 72 bp GATTTATTGCTATGCTGCCCACTGTACATTGTAGCTTaGAGCTATTTAGTTCACGTTCATCAGCCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: DLLLCCPLYIVA*SYLVHVHQPLR
Trigger: CCTGAGAGGCTGATGAACGTGAACTAAATAGCTTCAAGCTACAATGTACAGTGGGCAGCATAGCAATAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503714.1
CDS TCA 72 bp TGCTGCTTTGGTAGAAGCAACACAAACCTGTGGCCATaGAAGAGTTATCTGGTTTCATACGAACCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: CCFGRSNTNLWP*KSYLVSYEPSS
Trigger: TGAAGAAGGTTCGTATGAAACCAGATAACTCTTTCATGGCCACAGGTTTGTGTTGCTTCTACCAAAGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514517.1
CDS TCA 72 bp GGTGTTAAAATAAACCAGGGACAAGGTTGCCCACAGTaGCCCAGAAAGGCCAATATGCTATTTAAACTAACC +
Preference number: 6 (lower is better)
Translates to: GVKINQGQGCPQ*PRKANMLFKLT
Trigger: GGTTAGTTTAAATAGCATATTGGCCTTTCTGGGTCACTGTGGGCAACCTTGTCCCTGGTTTATTTTAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS CCA 72 bp GTGAAGTCTGGGATAGGGAATGGTGGAGGAACAATTTaGCTCTCTGCTTTAACAATGTGGTCTTTAATGTTC +
Preference number: 6 (lower is better)
Translates to: VKSGIGNGGGTI*LSALTMWSLMF
Trigger: GAACATTAAAGACCACATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505469.1
ENST00000509642.5
ENST00000512169.1
CDS CCA 72 bp TCTTCATCTATCTTCTGTGGCCATGAAAGAGTTATCTaGTTTCATACGAACCTTCTTCACAGGGAAGACCCA +
Preference number: 6 (lower is better)
Translates to: SSSIFCGHERVI*FHTNLLHREDP
Trigger: TGGGTCTTCCCTGTGAAGAAGGTTCGTATGAAACCAGATAACTCTTTCATGGCCACAGAAGATAGATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS CCA 72 bp TGGCTCCTACAGGAGGCATTTCCCAATAATGAAGGGTaGATTAAGAATCTTCTCACCCAAAATTTCAATTGC +
Preference number: 6 (lower is better)
Translates to: WLLQEAFPNNEG*IKNLLTQNFNC
Trigger: GCAATTGAAATTTTGGGTGAGAAGATTCTTAATCCACCCTTCATTATTGGGAAATGCCTCCTGTAGGAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS CCA 72 bp CCCCTTCACTTTCAGAAGATAATCTTGATACCTTCTTaGTTCCTCAGAAGAGCATCTTCTCCAAGCTTACTT +
Preference number: 6 (lower is better)
Translates to: PLHFQKIILIPS*FLRRASSPSLL
Trigger: AAGTAAGCTTGGAGAAGATGCTCTTCTGAGGAACCAAGAAGGTATCAAGATTATCTTCTGAAAGTGAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS CAA 72 bp TGTGAAGTCTGGGATAGGGAATGGTGGAGGAACAATTaGGCTCTCTGCTTTAACAATGTGGTCTTTAATGTT +
Preference number: 6 (lower is better)
Translates to: CEVWDREWWRNN*ALCFNNVVFNV
Trigger: AACATTAAAGACCACATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505469.1
ENST00000509642.5
ENST00000512169.1
CDS CAA 72 bp TATCACCTCTGTCCCCTTCACTTTCAGAAGATAATCTaGATACCTTCTTGGTTCCTCAGAAGAGCATCTTCT +
Preference number: 6 (lower is better)
Translates to: YHLCPLHFQKII*IPSWFLRRASS
Trigger: AGAAGATGCTCTTCTGAGGAACCAAGAAGGTATCAAGATTATCTTCTGAAAGTGAAGGGGACAGAGGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509702.5
CDS CAA 90 bp CTTGTTAGATGTGAAGTCTGGGATAGGGAATGGTGGAGGAACAATTaGGCTCTCTGCTTTAACAATGTGGTCTTTAATGTTCAGCTTTTT +
Preference number: 6 (lower is better)
Translates to: LVRCEVWDREWWRNN*ALCFNNVVFNVQLF
Trigger: AAAAAGCTGAACATTAAAGACCACATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACATCTAACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505469.1
ENST00000509642.5
ENST00000512169.1
CDS GCA 72 bp GCTTCATTCAGAAGTAACAGACGAATGAATGAAAGATaGCCATTCAGTTGTATCATGGAGGCATTAAAGCAG +
Preference number: 6 (lower is better)
Translates to: ASFRSNRRMNER*PFSCIMEALKQ
Trigger: CTGCTTTAATGCCTCCATGATACAACTGAATGGGCATCTTTCATTCATTCGTCTGTTACTTCTGAATGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613098.4
CDS CCA 72 bp ATTAACCTTGTTAGATGTGAAGTCTGGGATAGGGAATaGTGGAGGAACAATTTGGCTCTCTGCTTTAACAAT +
Preference number: 6 (lower is better)
Translates to: INLVRCEVWDRE*WRNNLALCFNN
Trigger: ATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACATCTAACAAGGTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505469.1
CDS CCA 72 bp TATCTTCTTGTTAGATGTGAAGTCTGGGATAGGGAATaGTGGAGGAACAATTTGGCTCTCTGCTTTAACAAT +
Preference number: 6 (lower is better)
Translates to: YLLVRCEVWDRE*WRNNLALCFNN
Trigger: ATTGTTAAAGCAGAGAGCCAAATTGTTCCTCCACCATTCCCTATCCCAGACTTCACATCTAACAAGAAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509642.5
ENST00000512169.1
CDS TCA 72 bp TTGCTGTTGACAAATACTCTTCGCTTTATTGCTCCATaGATTCTCAGTCTTAACAATTGCAGGGTTTGTTCT +
Preference number: 6 (lower is better)
Translates to: LLLTNTLRFIAP*ILSLNNCRVCS
Trigger: AGAACAAACCCTGCAATTGTTAAGACTGAGAATTCATGGAGCAATAAAGCGAAGAGTATTTGTCAACAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264867.7
ENST00000506055.5
ENST00000509642.5
ENST00000509702.5
ENST00000513205.5
ENST00000514479.1
ENST00000612355.1
ENST00000613098.4
ENST00000617484.4