Pregenerated sensors for PPA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000180817Ensembl transcript IDs: ENST00000373230.7, ENST00000460755.1, ENST00000610026.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTCAGCCTCCTGAGTAGCTGGGACTATAAGCATGCACACGCCCAGCTAATTTTTGGGGTCTCGTCATGTTaGCCAGGCTGGTCTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: LSLLSSWDYKHAHAQLIFGVSSC*PGWSQT Trigger: AGTTTGAGACCAGCCTGGGCAACATGACGAGACCCC...AAAAATTAGCTGGGCGTGTGCATGCTTATAGTCCCAGCTACTCAGGAGGCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373230.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCTCCTGAGTAGCTGGGACTATAAGCATGCACACGCCCAGCTAATTTTTTTGAGGTACTATCCCTaGTCCAGAGGCAGAGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LSLLSSWDYKHAHAQLIFLRYYP*SRGRGY Trigger: ATAGCCTCTGCCTCTGGACCAGGGATAGTACCTCAA...AAAAATTAGCTGGGCGTGTGCATGCTTATAGTCCCAGCTACTCAGGAGGCTGAG 50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000373230.7 |
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| CDS-3UTR TCA 90 bp | CTCAGCCTCCTGAGTAGCTGGGACTATAAGCATGCACACGCCCAGCTAATTTTTGATATCTCAGCCTCCTaGGTAGCTGGGACTATAAGC | + |
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Preference number: 4 (lower is better) Translates to: LSLLSSWDYKHAHAQLIFDISAS*VAGTIS Trigger: GCTTATAGTCCCAGCTACTCAGGAGGCTGAGATATC...AAAAATTAGCTGGGCGTGTGCATGCTTATAGTCCCAGCTACTCAGGAGGCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373230.7 |
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| CDS CCA 90 bp | GAGAACTGTTTTCTGGGTGAAGCAGCCTGTGGCCAGGTGGGAATGTaGAGATCAGCCCACTCAGGGTCCCCTCCAGTGTCCAGCGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: ENCFLGEAACGQVGM*RSAHSGSPPVSSGH Trigger: GTGCCCGCTGGACACTGGAGGGGACCCTGAGTGGGCTGATCTCCACATTCCCACCTGGCCACAGGCTGCTTCACCCAGAAAACAGTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CCA 90 bp | ATCAGCCCACTCAGGGTCCCCTCCAGTGTCCAGCGGGCACCTCCATaGAACTCAGAGGGGCACAATGGGTCATGGTTTGGAAACCACTGT | + |
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Preference number: 5 (lower is better) Translates to: ISPLRVPSSVQRAPP*NSEGHNGSWFGNHC Trigger: ACAGTGGTTTCCAAACCATGACCCATTGTGCCCCTCTGAGTTCCATGGAGGTGCCCGCTGGACACTGGAGGGGACCCTGAGTGGGCTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CCA 90 bp | AAGGAGGAGAGAACTGTTTTCTGGGTGAAGCAGCCTGTGGCCAGGTaGGAATGTGGAGATCAGCCCACTCAGGGTCCCCTCCAGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: KEERTVFWVKQPVAR*ECGDQPTQGPLQCP Trigger: TGGACACTGGAGGGGACCCTGAGTGGGCTGATCTCCACATTCCCACCTGGCCACAGGCTGCTTCACCCAGAAAACAGTTCTCTCCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS TCA 90 bp | GGTAAATTCATAGAGGTAGAGAGTAGAATGGTGGTTGCCAGGAGCTaGAGGATGGGGAAAGGGCAGGCGATGGTCAAAGGGTACCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GKFIEVESRMVVARS*RMGKGQAMVKGYQV Trigger: AACTTGGTACCCTTTGACCATCGCCTGCCCTTTCCCCATCCTTCAGCTCCTGGCAACCACCATTCTACTCTCTACCTCTATGAATTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CCA 90 bp | TCCCTCAGCTTCTCCCTCAGTCAAATGGCCACTTGCATGTGTTCATaGTTTCTAATTTCAAGACTCCACACAGTAACATGCATACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLSFSLSQMATCMCS*FLISRLHTVTCIQK Trigger: CTTTTGTATGCATGTTACTGTGTGGAGTCTTGAAATTAGAAACCATGAACACATGCAAGTGGCCATTTGACTGAGGGAGAAGCTGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CCA 90 bp | GCTAGAACCAAGTCAAGTAAATTCCCATTGATTCTTTTGCGGAAATaGCTTATGATGGGTCATAGGCACACAGGTTACTTGGTACATTCT | + |
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Preference number: 5 (lower is better) Translates to: ARTKSSKFPLILLRK*LMMGHRHTGYLVHS Trigger: AGAATGTACCAAGTAACCTGTGTGCCTATGACCCATCATAAGCCATTTCCGCAAAAGAATCAATGGGAATTTACTTGACTTGGTTCTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS GCA 90 bp | TGCATGTGTTCATGGTTTCTAATTTCAAGACTCCACACAGTAACATaGATACAAAAGGCACTCAAGTATTTGTCGAAACAAGTACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CMCSWFLISRLHTVT*IQKALKYLSKQVLP Trigger: AGGAAGTACTTGTTTCGACAAATACTTGAGTGCCTTTTGTATGCATGTTACTGTGTGGAGTCTTGAAATTAGAAACCATGAACACATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CCA 90 bp | TTATACACTCAACAAAAATTCCAAGTACTTATTTTGAAAGAGCTGTaGAATGACTTATCACGGAAGTTCAAGATAACATTGGAGCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LYTQQKFQVLILKEL*NDLSRKFKITLERS Trigger: GCTTCGCTCCAATGTTATCTTGAACTTCCGTGATAAGTCATTCCACAGCTCTTTCAAAATAAGTACTTGGAATTTTTGTTGAGTGTATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CCA 72 bp | CTCAGGGTCCCCTCCAGTGTCCAGCGGGCACCTCCATaGAACTCAGAGGGGCACAATGGGTCATGGTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LRVPSSVQRAPP*NSEGHNGSWFG Trigger: TCCAAACCATGACCCATTGTGCCCCTCTGAGTTCCATGGAGGTGCCCGCTGGACACTGGAGGGGACCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS TCA 72 bp | GGATCGCCAGCCTGGGTGACATGGCGAAACCCGGCCTaGTTAGTGTTCAAGACCAGCCTGGTTCGAGACCTG | + |
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Preference number: 6 (lower is better) Translates to: GSPAWVTWRNPA*LVFKTSLVRDL Trigger: CAGGTCTCGAACCAGGCTGGTCTTGAACACTAATCAGGCCGGGTTTCGCCATGTCACCCAGGCTGGCGATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS TCA 72 bp | CCTCCACAGTTCAGCGATCCTCTCACCTCAGCCTCCTaGGTAGCTGGGACTATAAGCATGCACACGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPQFSDPLTSAS*VAGTISMHTPS Trigger: GCTGGGCGTGTGCATGCTTATAGTCCCAGCTACTCAGGAGGCTGAGGTGAGAGGATCGCTGAACTGTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS TCA 72 bp | ATAGAGGTAGAGAGTAGAATGGTGGTTGCCAGGAGCTaGAGGATGGGGAAAGGGCAGGCGATGGTCAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: IEVESRMVVARS*RMGKGQAMVKG Trigger: CCCTTTGACCATCGCCTGCCCTTTCCCCATCCTTCAGCTCCTGGCAACCACCATTCTACTCTCTACCTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 72 bp | CTCCATGGAACTCAGAGGGGCACAATGGGTCATGGTTaGGAAACCACTGTGATACAGTGTGGCACTAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LHGTQRGTMGHG*ETTVIQCGTKG Trigger: ACCTTTAGTGCCACACTGTATCACAGTGGTTTCCAAACCATGACCCATTGTGCCCCTCTGAGTTCCATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 72 bp | TCACTCCCTCAGCTTCTCCCTCAGTCAAATGGCCACTaGCATGTGTTCATGGTTTCTAATTTCAAGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLPQLLPQSNGH*HVFMVSNFKTP Trigger: TGGAGTCTTGAAATTAGAAACCATGAACACATGCAAGTGGCCATTTGACTGAGGGAGAAGCTGAGGGAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CCA 72 bp | ACTGGGACCAGACAGAGAAAAACCTTGACGTTCAGATaGTTCATCCTTGATCAAGTCAGTGTGACTAGATCA | + |
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Preference number: 6 (lower is better) Translates to: TGTRQRKTLTFR*FILDQVSVTRS Trigger: TGATCTAGTCACACTGACTTGATCAAGGATGAACCATCTGAACGTCAAGGTTTTTCTCTGTCTGGTCCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460755.1 |
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| CDS CAA 72 bp | CTGTGGAATGACTTATCACGGAAGTTCAAGATAACATaGGAGCGAAGCCCCTTGTTGAGAAGAGAAGCCATA | + |
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Preference number: 6 (lower is better) Translates to: LWNDLSRKFKIT*ERSPLLRREAI Trigger: TATGGCTTCTCTTCTCAACAAGGGGCTTCGCTCCAATGTTATCTTGAACTTCCGTGATAAGTCATTCCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CCA 72 bp | TTCTCCCTCAGTCAAATGGCCACTTGCATGTGTTCATaGTTTCTAATTTCAAGACTCCACACAGTAACATGC | + |
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Preference number: 6 (lower is better) Translates to: FSLSQMATCMCS*FLISRLHTVTC Trigger: GCATGTTACTGTGTGGAGTCTTGAAATTAGAAACCATGAACACATGCAAGTGGCCATTTGACTGAGGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 90 bp | TTGAAAGAGCTGTGGAATGACTTATCACGGAAGTTCAAGATAACATaGGAGCGAAGCCCCTTGTTGAGAAGAGAAGCCATACACATATAC | + |
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Preference number: 6 (lower is better) Translates to: LKELWNDLSRKFKIT*ERSPLLRREAIHIY Trigger: GTATATGTGTATGGCTTCTCTTCTCAACAAGGGGCTTCGCTCCAATGTTATCTTGAACTTCCGTGATAAGTCATTCCACAGCTCTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 90 bp | TCAGTCCTTGCTAGAACCAAGTCAAGTAAATTCCCATTGATTCTTTaGCGGAAATGGCTTATGATGGGTCATAGGCACACAGGTTACTTG | + |
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Preference number: 6 (lower is better) Translates to: SVLARTKSSKFPLIL*RKWLMMGHRHTGYL Trigger: CAAGTAACCTGTGTGCCTATGACCCATCATAAGCCATTTCCGCAAAAGAATCAATGGGAATTTACTTGACTTGGTTCTAGCAAGGACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 90 bp | ATACCTTCCTCAGTCCTTGCTAGAACCAAGTCAAGTAAATTCCCATaGATTCTTTTGCGGAAATGGCTTATGATGGGTCATAGGCACACA | + |
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Preference number: 6 (lower is better) Translates to: IPSSVLARTKSSKFP*ILLRKWLMMGHRHT Trigger: TGTGTGCCTATGACCCATCATAAGCCATTTCCGCAAAAGAATCAATGGGAATTTACTTGACTTGGTTCTAGCAAGGACTGAGGAAGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 72 bp | GCTAGAACCAAGTCAAGTAAATTCCCATTGATTCTTTaGCGGAAATGGCTTATGATGGGTCATAGGCACACA | + |
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Preference number: 6 (lower is better) Translates to: ARTKSSKFPLIL*RKWLMMGHRHT Trigger: TGTGTGCCTATGACCCATCATAAGCCATTTCCGCAAAAGAATCAATGGGAATTTACTTGACTTGGTTCTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS TCA 72 bp | GGCACACAGGTTACTTGGTACATTCTGGAACCATTCTaGTTTTTACAAATCTTACTACCATGCTATCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GTQVTWYILEPF*FLQILLPCYLS Trigger: GGACAGATAGCATGGTAGTAAGATTTGTAAAAATCAGAATGGTTCCAGAATGTACCAAGTAACCTGTGTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 72 bp | TCAGTCCTTGCTAGAACCAAGTCAAGTAAATTCCCATaGATTCTTTTGCGGAAATGGCTTATGATGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SVLARTKSSKFP*ILLRKWLMMGH Trigger: ATGACCCATCATAAGCCATTTCCGCAAAAGAATCAATGGGAATTTACTTGACTTGGTTCTAGCAAGGACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 90 bp | GACTTATCACGGAAGTTCAAGATAACATTGGAGCGAAGCCCCTTGTaGAGAAGAGAAGCCATACACATATACATTGAAAGAAAATCATCT | + |
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Preference number: 6 (lower is better) Translates to: DLSRKFKITLERSPL*RREAIHIYIERKSS Trigger: AGATGATTTTCTTTCAATGTATATGTGTATGGCTTCTCTTCTCAACAAGGGGCTTCGCTCCAATGTTATCTTGAACTTCCGTGATAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS TCA 72 bp | TTACAAATCTTACTACCATGCTATCTGTCCAACTTATaGTTGATTAGAATCACTCCCTCAGCTTCTCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LQILLPCYLSNL*LIRITPSASPS Trigger: TGAGGGAGAAGCTGAGGGAGTGATTCTAATCAATCATAAGTTGGACAGATAGCATGGTAGTAAGATTTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS CAA 90 bp | AATGACTTATCACGGAAGTTCAAGATAACATTGGAGCGAAGCCCCTaGTTGAGAAGAGAAGCCATACACATATACATTGAAAGAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: NDLSRKFKITLERSP*LRREAIHIYIERKS Trigger: TGATTTTCTTTCAATGTATATGTGTATGGCTTCTCTTCTCAACAAGGGGCTTCGCTCCAATGTTATCTTGAACTTCCGTGATAAGTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS TCA 72 bp | AATTATTGCTTTGACGGGTGCTTTTACTACCTCACATaGAAGCCTTTCTTAGATTATGAATCATTCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: NYCFDGCFYYLT*KPFLDYESFLQ Trigger: TTGCAGGAATGATTCATAATCTAAGAAAGGCTTTCATGTGAGGTAGTAAAAGCACCCGTCAAAGCAATAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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| CDS GCA 72 bp | TCATGGTTTCTAATTTCAAGACTCCACACAGTAACATaGATACAAAAGGCACTCAAGTATTTGTCGAAACAA | + |
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Preference number: 6 (lower is better) Translates to: SWFLISRLHTVT*IQKALKYLSKQ Trigger: TTGTTTCGACAAATACTTGAGTGCCTTTTGTATGCATGTTACTGTGTGGAGTCTTGAAATTAGAAACCATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610026.1 |
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