RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POU6F2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106536

Ensembl transcript IDs: ENST00000403058.6, ENST00000416452.1, ENST00000426456.1, ENST00000451021.5, ENST00000464276.2, ENST00000517348.1, ENST00000518318.7, ENST00000520104.5, ENST00000524147.5, ENST00000673818.5, ENST00000673891.1, ENST00000674059.1

Found 1214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCTGGCGGCTGCTGAGAGGCGGGTGGTGGCTGCTGGGGTGGGGTaGGCTGCAGCGGCTGCTGCTGGGACTGCGAGGGCGCCTGTGGGG +
Preference number: 1 (lower is better)
Translates to: ELAAAERRVVAAGVG*AAAAAAGTARAPVG
Trigger: CCCCACAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAGCAGCCGCCAGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp TGTAGGAGCTGGCGGCTGCTGAGAGGCGGGTGGTGGCTGCTGGGGTaGGGTGGGCTGCAGCGGCTGCTGCTGGGACTGCGAGGGCGCCTG +
Preference number: 1 (lower is better)
Translates to: CRSWRLLRGGWWLLG*GGLQRLLLGLRGRL
Trigger: CAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAGCAGCCGCCAGCTCCTACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp GGACTGCGAGGGCGCCTGTGGGGCTGGTTGCGGGTGCTGGTTGGTTaGCGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGAG +
Preference number: 1 (lower is better)
Translates to: GLRGRLWGWLRVLVG*RGRLLLLLLLLLLE
Trigger: CTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp GCTGGGACTGCGAGGGCGCCTGTGGGGCTGGTTGCGGGTGCTGGTTaGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: AGTARAPVGLVAGAG*LTGEAAAAAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAGTCCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp GGGGCTGGTTGCGGGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGGAGCTGGAGCTGGAGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: GAGCGCWLVDGGGCC*CCCCCCWSWSWSCW
Trigger: CCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp GCCTGTGGGGCTGGTTGCGGGTGCTGGTTGGTTGACGGGGGAGGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGGAGCTGGAGCTGGAGC +
Preference number: 1 (lower is better)
Translates to: ACGAGCGCWLVDGGG*CCCCCCCCWSWSWS
Trigger: GCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp TTGCAGCTGAGATGTAGGAGCTGGCGGCTGCTGAGAGGCGGGTGGTaGCTGCTGGGGTGGGGTGGGCTGCAGCGGCTGCTGCTGGGACTG +
Preference number: 1 (lower is better)
Translates to: LQLRCRSWRLLRGGW*LLGWGGLQRLLLGL
Trigger: CAGTCCCAGCAGCAGCCGCTGCAGCCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAGCAGCCGCCAGCTCCTACATCTCAGCTGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp CTGTTGCAGCTGAGATGTAGGAGCTGGCGGCTGCTGAGAGGCGGGTaGTGGCTGCTGGGGTGGGGTGGGCTGCAGCGGCTGCTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: LLQLRCRSWRLLRGG*WLLGWGGLQRLLLG
Trigger: TCCCAGCAGCAGCCGCTGCAGCCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAGCAGCCGCCAGCTCCTACATCTCAGCTGCAACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp GCTGGTTGCGGGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGGAGCTGGAGCTGGAGCTGCTGGAGC +
Preference number: 1 (lower is better)
Translates to: AGCGCWLVDGGGCCC*CCCCCWSWSWSCWS
Trigger: GCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp TGTGGGGCTGGTTGCGGGTGCTGGTTGGTTGACGGGGGAGGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGGAGCTGGAGCTGGAGCTGC +
Preference number: 1 (lower is better)
Translates to: CGAGCGCWLVDGGGC*CCCCCCCWSWSWSC
Trigger: GCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp TGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGGAGCTGGAGCTGGAGCTGCTGGAGCTGGGAGTTCAGG +
Preference number: 1 (lower is better)
Translates to: CWLVDGGGCCCCCCC*CWSWSWSCWSWEFR
Trigger: CCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp GACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGAGCTaGAGCTGGAGCTGCTGGAGCTGGGAGTTCAGGGATGAGGTAGCT +
Preference number: 1 (lower is better)
Translates to: DGGGCCCCCCCCCWS*SWSCWSWEFRDEVA
Trigger: AGCTACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp GTGAGCCAGGTGCAGAAGGTTGCCTTGGGAGGCTGCTTGACCCACTaGCGTCTGGGAGGGTTGGTGGAGCTGCTGGCCGGGCTTGATGGG +
Preference number: 1 (lower is better)
Translates to: VSQVQKVALGGCLTH*RLGGLVELLAGLDG
Trigger: CCCATCAAGCCCGGCCAGCAGCTCCACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp TGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGGAGCTGGAGCTGGAGCTGCTGGAGCTGGGAGTTCAGGGAT +
Preference number: 1 (lower is better)
Translates to: WLVDGGGCCCCCCCC*WSWSWSCWSWEFRD
Trigger: ATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp TTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGAGCTGGAGCTGGAGCTGCTGGAGCTGGGAGTTCAGGGATGAG +
Preference number: 1 (lower is better)
Translates to: LVDGGGCCCCCCCCC*SWSWSCWSWEFRDE
Trigger: CTCATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp GGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGAGCTGGAGCTaGAGCTGCTGGAGCTGGGAGTTCAGGGATGAGGTAGCTTGTAGA +
Preference number: 1 (lower is better)
Translates to: GGCCCCCCCCCWSWS*SCWSWEFRDEVACR
Trigger: TCTACAAGCTACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp ACCTGTGACCCCCTGAAGACTGGAGAGGGCATTGCCAAAGGCCTGTaGGCTTGCTATGGAGCTCATGGCTGCTGCAGCCGCTGCAGCCTG +
Preference number: 1 (lower is better)
Translates to: TCDPLKTGEGIAKGL*ACYGAHGCCSRCSL
Trigger: CAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCTTCAGGGGGTCACAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp GGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTG +
Preference number: 1 (lower is better)
Translates to: GSLPINSVRFCIPAR*RASASAIHRSSTGL
Trigger: CAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGGAGCTGGAGCTGGAGCTaGTGGAGCTGGGAGTTCAGGGATGAGGTAGCTTGTAGATTTTGC +
Preference number: 1 (lower is better)
Translates to: CCCCCCCCCWSWSWS*WSWEFRDEVACRFC
Trigger: GCAAAATCTACAAGCTACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp TCCCTCCTGCTGCCTGCTCCGGGCACGGAGAAGCAGATCTCTTTGTaGTGCCTCATAAGTGACCCCGGTGACCAGTCTAGATCACAGCAC +
Preference number: 1 (lower is better)
Translates to: SLLLPAPGTEKQISL*CLISDPGDQSRSQH
Trigger: GTGCTGTGATCTAGACTGGTCACCGGGGTCACTTATGAGGCACCACAAAGAGATCTGCTTCTCCGTGCCCGGAGCAGGCAGCAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp CCTGAAGACTGGAGAGGGCATTGCCAAAGGCCTGTGAGCTTGCTATaGAGCTCATGGCTGCTGCAGCCGCTGCAGCCTGACTTGCTAGTG +
Preference number: 1 (lower is better)
Translates to: PEDWRGHCQRPVSLL*SSWLLQPLQPDLLV
Trigger: CACTAGCAAGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp ATGGGTGACAGCGTGATGCCCTGGGTGTTGATCACGGGCAGGATCTaGTTCCCAATGACTGTGGCGATGATCTGGCCCTGGGCGTTTGTG +
Preference number: 1 (lower is better)
Translates to: MGDSVMPWVLITGRI*FPMTVAMIWPWAFV
Trigger: CACAAACGCCCAGGGCCAGATCATCGCCACAGTCATTGGGAACCAGATCCTGCCCGTGATCAACACCCAGGGCATCACGCTGTCACCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp TTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCAC +
Preference number: 1 (lower is better)
Translates to: FGWFTPDKLGQVLHT*SMAGLSLSHPPLKH
Trigger: GTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp TTGCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTaGATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGC +
Preference number: 1 (lower is better)
Translates to: LRFLDGSLPINSVRF*IPARWRASASAIHR
Trigger: GCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp CCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTaGTCACCTGCACAGCCGTCCTCACATCCCAACATGTCCTTGCTT +
Preference number: 1 (lower is better)
Translates to: PSACTWVKTPVAAAK*SPAQPSSHPNMSLL
Trigger: AAGCAAGGACATGTTGGGATGTGAGGACGGCTGTGCAGGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp GACTTTGAGACATGGATGCTTGGCTGTGAGCCAGGTGCAGAAGGTTaGCTTGGGAGGCTGCTTGACCCACTGACGTCTGGGAGGGTTGGT +
Preference number: 1 (lower is better)
Translates to: DFETWMLGCEPGAEG*LGRLLDPLTSGRVG
Trigger: ACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp GGCAGAGTCATAATGCCTCCGGCTGCAGCTGCTGCCACCAGCCCTTaGATGTTGGTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCCT +
Preference number: 1 (lower is better)
Translates to: GRVIMPPAAAAATSP*MLVRFAVGSVRTSP
Trigger: AGGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATGACTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp TGGCTGCACTTGCAAGCCCTGAGTGCCGCTTGCTGCTTGGCTCGATaGCCCTGGATTAGGCATCAGTGGAATGGTCCCGATAATCTGTCC +
Preference number: 1 (lower is better)
Translates to: WLHLQALSAACCLAR*PWIRHQWNGPDNLS
Trigger: GGACAGATTATCGGGACCATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp CTCCTGCTGCCTGCTCCGGGCACGGAGAAGCAGATCTCTTTGTGGTaGCTCATAAGTGACCCCGGTGACCAGTCTAGATCACAGCACATA +
Preference number: 1 (lower is better)
Translates to: LLLPAPGTEKQISLW*LISDPGDQSRSQHI
Trigger: TATGTGCTGTGATCTAGACTGGTCACCGGGGTCACTTATGAGGCACCACAAAGAGATCTGCTTCTCCGTGCCCGGAGCAGGCAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp ATGATTTTTCCAAAGCAACCCAGTCCTGTTTCCTGCCCTCCCTCCTaGTGCCTGCTCCGGGCACGGAGAAGCAGATCTCTTTGTGGTGCC +
Preference number: 1 (lower is better)
Translates to: MIFPKQPSPVSCPPS*CLLRARRSRSLCGA
Trigger: GGCACCACAAAGAGATCTGCTTCTCCGTGCCCGGAGCAGGCAGCAGGAGGGAGGGCAGGAAACAGGACTGGGTTGCTTTGGAAAAATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp CACTTGCAAGCCCTGAGTGCCGCTTGCTGCTTGGCTCGATGGCCCTaGATTAGGCATCAGTGGAATGGTCCCGATAATCTGTCCTTGTGC +
Preference number: 1 (lower is better)
Translates to: HLQALSAACCLARWP*IRHQWNGPDNLSLC
Trigger: GCACAAGGACAGATTATCGGGACCATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp TGTGAGCTTGCTATGGAGCTCATGGCTGCTGCAGCCGCTGCAGCCTaGCTTGCTAGTGGATTATTAACCAGCTGTAGAGGATTGGGTGGC +
Preference number: 1 (lower is better)
Translates to: CELAMELMAAAAAAA*LASGLLTSCRGLGG
Trigger: GCCACCCAATCCTCTACAGCTGGTTAATAATCCACTAGCAAGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAAGCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp CTTCTTGTCATGATGATTTTTCCAAAGCAACCCAGTCCTGTTTCCTaGCCTCCCTCCTGCTGCCTGCTCCGGGCACGGAGAAGCAGATCT +
Preference number: 1 (lower is better)
Translates to: LLVMMIFPKQPSPVS*PPSCCLLRARRSRS
Trigger: AGATCTGCTTCTCCGTGCCCGGAGCAGGCAGCAGGAGGGAGGGCAGGAAACAGGACTGGGTTGCTTTGGAAAAATCATCATGACAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp ATGTTGGTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCCTTGCTaGCCTCCTAGCTGTCCCGCCATGTTGAAGGGAATGAGGATTGGC +
Preference number: 1 (lower is better)
Translates to: MLVRFAVGSVRTSPC*PPSCPAMLKGMRIG
Trigger: GCCAATCCTCATTCCCTTCAACATGGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp TGGATGTTGGTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCCTTaGTGGCCTCCTAGCTGTCCCGCCATGTTGAAGGGAATGAGGATT +
Preference number: 1 (lower is better)
Translates to: WMLVRFAVGSVRTSP*WPPSCPAMLKGMRI
Trigger: AATCCTCATTCCCTTCAACATGGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAACATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp CTGCTAGCTATAGTGTTCTCTTGGGCTTCCTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGCTGTAC +
Preference number: 1 (lower is better)
Translates to: LLAIVFSWASCGRKK*LLRMVCLQMADWLY
Trigger: GTACAGCCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGAGAACACTATAGCTAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR TCA 90 bp AGCCTTGTCCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGACTTGTCCAGCTATCATTGGATCCTG +
Preference number: 1 (lower is better)
Translates to: SLVLTSQLRIHFTPH*QQGLTDLSSYHWIL
Trigger: CAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGGACAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp AGAGAGTCTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTaGTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTA +
Preference number: 1 (lower is better)
Translates to: RESVKGSKGTAVAGS*CFKRLIVFFRACLL
Trigger: TAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAGACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp CCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGT +
Preference number: 1 (lower is better)
Translates to: PGFSLAVRLLAIVFS*ASCGRKKWLLRMVC
Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATaGGTGGAGACAGTAGATGGGAAAGATGGGAGAAATCAGGCTTCC +
Preference number: 1 (lower is better)
Translates to: NSEPHRMASTMVPTP*VETVDGKDGRNQAS
Trigger: GGAAGCCTGATTTCTCCCATCTTTCCCATCTACTGTCTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp CGTGGCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTaGGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCA +
Preference number: 1 (lower is better)
Translates to: RGQQTEKNPKLWCGQ*AQLQLMPVLTVHRA
Trigger: TGCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp CTGACTTTGGTTAATAGGTTTCATAGTGAATCAGCACTTAGTACCTaGAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATTCGCT +
Preference number: 1 (lower is better)
Translates to: LTLVNRFHSESALST*RGAVLPPGGRLVFA
Trigger: AGCGAATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTGATTCACTATGAAACCTATTAACCAAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp AGCTCTGGTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTaGCAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCT +
Preference number: 1 (lower is better)
Translates to: SSGVDSEHNYSLCQC*QFIEQSPSYFGVSP
Trigger: AGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACACCAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp TCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTGGATCCTGAAGAAGAGCACTCATTT +
Preference number: 1 (lower is better)
Translates to: STPHSFHSALTARAY*LVQLSLDPEEEHSF
Trigger: AAATGAGTGCTCTTCTTCAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp TGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTaGTTATGGGTGGGCATCTCTTTAGGAGTTTTCTTCCAGAGAGTC +
Preference number: 1 (lower is better)
Translates to: CGVPRVEFSFCEFCF*LWVGISLGVFFQRV
Trigger: GACTCTCTGGAAGAAAACTCCTAAAGAGATGCCCACCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp GTAACACAACTTTACGTGCGGAGAAGCGTAGACGAACGATCGCGTTaGAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAA +
Preference number: 1 (lower is better)
Translates to: VTQLYVRRSVDERSR*NAMFLTLVNRFHSE
Trigger: TTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGATCGTTCGTCTACGCTTCTCCGCACGTAAAGTTGTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp ACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCCCCTaGAAAAAGTCTGCCATCGCTATTGGAATGAAAGAAGTAGCAGAA +
Preference number: 1 (lower is better)
Translates to: TFLLHLYIPKSNYSP*KKSAIAIGMKEVAE
Trigger: TTCTGCTACTTCTTTCATTCCAATAGCGATGGCAGACTTTTTTCAGGGGGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp CTATCATTGGATCCTGAAGAAGAGCACTCATTTGCCACTTCCTCTTaGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTAAACAG +
Preference number: 1 (lower is better)
Translates to: LSLDPEEEHSFATSS*IIIRTFFQHLDSKQ
Trigger: CTGTTTACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCTTCAGGATCCAATGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 90 bp CAACATTTAGCCATATCTATACAATGTGCATATACCTACAAATATTaGGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGGCATTTTACGA +
Preference number: 1 (lower is better)
Translates to: QHLAISIQCAYTYKY*ALVQRRETSKGILR
Trigger: TCGTAAAATGCCTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCACATTGTATAGATATGGCTAAATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR GCA 90 bp CTCCCAATTATAGATCTCAGAACTGAGCAGGCCTTATGTAACCGCTaGCGGCATATATTTAAATATTTAGCATCCATCATATGTTATCTT +
Preference number: 1 (lower is better)
Translates to: LPIIDLRTEQALCNR*RHIFKYLASIICYL
Trigger: AAGATAACATATGATGGATGCTAAATATTTAAATATATGCCGGCAGCGGTTACATAAGGCCTGCTCAGTTCTGAGATCTATAATTGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 90 bp ATTAAATTAAATTTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTGGGCA +
Preference number: 1 (lower is better)
Translates to: IKLNFVVVVVVESQG*SLVSVNFASDYGWA
Trigger: TGCCCACCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAAATTTAATTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp GGGACTGCGAGGGCGCCTGTGGGGCTGGTTGCGGGTGCTGGTTGGTaGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: GTARAPVGLVAGAGW*TGEAAAAAAAAAAG
Trigger: TCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp TGCTGGGACTGCGAGGGCGCCTGTGGGGCTGGTTGCGGGTGCTGGTaGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: CWDCEGACGAGCGCW*VDGGGCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAGTCCCAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCCTGCGAGGGCGCCTGTaGGGCTGGTTGCGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTLRGRL*GWLRVL
Trigger: CAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAG...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCGCCTCCGGCTGCAGCTaGTGCCACCAGCCCTTGGAT +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTASGCS*CHQPLD
Trigger: ATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGC...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCGGGGCTGGTTGCGGGTaGTGGTTGGTTGACGGGGGA +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTGAGCG*WLVDGG
Trigger: TCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCC...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATGCTGCCACCAGCCCTTaGATGTTGGTGAGATTCGCT +
Preference number: 2 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDAATSP*MLVRFA
Trigger: AGCGAATCTCACCAACATCCAAGGGCTGGTGGCAGC...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp CCCTCCCTCCTGCTGCCTGCTCCGGGCACGGAGAAGCAGATCTCTTaGTGGTGCCTCATAAGTGACCCCGGTGACCAGTCTAGATCACAG +
Preference number: 2 (lower is better)
Translates to: PSLLLPAPGTEKQIS*WCLISDPGDQSRSQ
Trigger: CTGTGATCTAGACTGGTCACCGGGGTCACTTATGAGGCACCACAAAGAGATCTGCTTCTCCGTGCCCGGAGCAGGCAGCAGGAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp AGCTGCTGGCCGGGCTTGATGGGTGACAGCGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGGTTCCCAATGACTGTGGCGATGATC +
Preference number: 2 (lower is better)
Translates to: SCWPGLMGDSVMPWV*ITGRIWFPMTVAMI
Trigger: GATCATCGCCACAGTCATTGGGAACCAGATCCTGCCCGTGATCAACACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGCCAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGTGGGCTGCAGCGGCTaGTGCTGGGACTGCGAGGGC +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEVGCSG*CWDCEG
Trigger: GCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCCCAC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVCIPAR*RASASA
Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCTGGCCCAACTGGAAATaGGGGGTGGGTCTGACTGGC +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTWPNWK*GVGLTG
Trigger: GCCAGTCAGACCCACCCCCCATTTCCAGTTGGGCCA...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCGCGATGATCTGGCCCTaGGCGTTTGTGAGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCAMIWP*AFVRSW
Trigger: CCAGCTCCTCACAAACGCCCAGGGCCAGATCATCGC...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp GGAAGAAGAGGAAGCCTGCCGGACGGGACTTTGAGACATGGATGCTaGGCTGTGAGCCAGGTGCAGAAGGTTGCCTTGGGAGGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: GRRGSLPDGTLRHGC*AVSQVQKVALGGCL
Trigger: CAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAGGCTTCCTCTTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATGGCTGCTTGACCCACTaGCGTCTGGGAGGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYGCLTH*RLGGLV
Trigger: CACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCC...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCTTCTCCCCACTTCTGTaGCCTTCCAGCAGACCCCAG +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTFSPLL*PSSRPQ
Trigger: CTGGGGTCTGCTGGAAGGCCACAGAAGTGGGGAGAA...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp TGGCAGAGTCATAATGCCTCCGGCTGCAGCTGCTGCCACCAGCCCTaGGATGTTGGTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCC +
Preference number: 2 (lower is better)
Translates to: WQSHNASGCSCCHQP*DVGEIRCWQCENQS
Trigger: GGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATGACTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGCCTCCGGCTGCAGCTaGTGCCACCAGCCCTTGGAT +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEASGCS*CHQPLD
Trigger: ATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCATGGTACCCACCCCATaGGTGGAGACAGTAGATGGG +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTMVPTP*VETVDG
Trigger: CCCATCTACTGTCTCCACCCATGGGGTGGGTACCAT...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTGGGCGCCTGTGGGGCTaGTTGCGGGTGCTGGTTGGT +
Preference number: 2 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVGRLWG*LRVLVG
Trigger: ACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCC...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTCTGAGAGGCGGGTGGTaGCTGCTGGGGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPLRGGW*LLGWGG
Trigger: CCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAG...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp GGCGCAAGCAGGGGCTCATTCAGCTCGCTGTCTGAAGTAGCAGCCTaGTCCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTGAC +
Preference number: 2 (lower is better)
Translates to: GASRGSFSSLSEVAA*SSPLNSAFISLRTD
Trigger: GTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGGACAAGGCTGCTACTTCAGACAGCGAGCTGAATGAGCCCCTGCTTGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVSQSGH*GSQGPG
Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGAC +
Preference number: 2 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCHFTPH*QQGLTD
Trigger: GTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATG...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCGAATGGCTTCAACAATaGTACCCACCCCATGGGTGG +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTEWLQQ*YPPHGW
Trigger: CCACCCATGGGGTGGGTACCATTGTTGAAGCCATTC...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGGGGGTGGGTCTGACTaGCCTGGTGTTGGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEGGGSD*PGVGQE
Trigger: CTCCTGACCAACACCAGGCCAGTCAGACCCACCCCC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CACCAGCCCTTGGATGTTGGTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCCCGTCAGAAGTGGCTGTaGCCCAACTGGAAATGGGGG +
Preference number: 2 (lower is better)
Translates to: HQPLDVGEIRCWQCENQSRQKWL*PNWKWG
Trigger: CCCCCATTTCCAGTTGGGCCACAGCCACTTCTGACG...GGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAACATCCAAGGGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACGGGCGCCTGTGGGGCTaGTTGCGGGTGCTGGTTGGT +
Preference number: 2 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYGRLWG*LRVLVG
Trigger: ACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCC...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCTGCAGCGGCTGCTGCTaGGACTGCGAGGGCGCCTGT +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSCSGCC*DCEGAC
Trigger: ACAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCA...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCACGTGGCCAACAGACTaGGAAAAATCCCAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCTWPTD*EKSQAL
Trigger: CAGAGCTTGGGATTTTTCTCAGTCTGTTGGCCACGT...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCTGTTTGTGCAGTTTTTaGGGTGGCGAAAGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTCLCSF*GGERGS
Trigger: AGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACA...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTACAGCAGAAGCTAACTaGTGTGCCGTCAGAAGTGGC +
Preference number: 2 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVTAEAN*CAVRSG
Trigger: GCCACTTCTGACGGCACAGCAGTTAGCTTCTGCTGT...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCACTTTGAGACATGGATaGTTGGCTGTGAGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTTLRHG*LAVSQV
Trigger: CACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGT...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTGTTGCGGGTGCTGGTTaGTTGACGGGGGAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISVAGAG*LTGEAA
Trigger: AGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAAC...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCGTCCTCGCTGTCATTTaGTTCCACAGGCGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACVLAVI*FHRRKQ
Trigger: CTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGAC...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCGAGGATTGGGTGGCGTaGGCGGTGAAGGCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSEDWVA*AVKAGH
Trigger: ATGGCCTGCCTTCACCGCTCACGCCACCCAATCCTC...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACCATAATGCCTCCGGCTaGAGCTGCTGCCACCAGCCC +
Preference number: 2 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYHNASG*SCCHQP
Trigger: GGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATG...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSCIPAR*RASASA
Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGCCCCGAAGAGCTTGCTaGGAGTGTCCTCGCTGTCAT +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEPRRAC*ECPRCH
Trigger: ATGACAGCGAGGACACTCCCAGCAAGCTCTTCGGGG...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCCTGAGATGTAGGAGCTaGCGGCTGCTGAGAGGCGGG +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSLRCRS*RLLRGG
Trigger: CCCGCCTCTCAGCAGCCGCCAGCTCCTACATCTCAG...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCCAAGGGCCTGGGGTGTaGAGGAGGTGCGCCGCTTGC +
Preference number: 2 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFQGPGV*RRCAAC
Trigger: GCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTG...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGTCCTCGCTGTCATTTaGTTCCACAGGCGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEVLAVI*FHRRKQ
Trigger: CTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGAC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACTGCACTTGCAAGCCCTaGGTGCCGCTTGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYCTCKP*VPLAAW
Trigger: CCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTGCA...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSQVLHT*SMAGLS
Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTG...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCGTGTTCTTCAGGGCTTaGCTCTTATTGCAGAACCAA +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTVFFRA*LLLQNQ
Trigger: TTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACAC...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATGCACACGATCCAGGATaGCCTCCCGTCAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYAHDPG*PPVKKK
Trigger: TTTCTTTTTGACGGGAGGGCATCCTGGATCGTGTGC...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCVESQG*SLVSVN
Trigger: ATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATGCTGGTTGCGGGTGCTaGTTGGTTGACGGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: SVDSSSSKALVILESLLHAGCGC*LVDGGG
Trigger: GCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGC...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTTTCTGGTTCTGGGAGTaGGAGTGGGGTTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVFWFWE*EWGWCC
Trigger: GCAGCACCAACCCCACTCCCACTCCCAGAACCAGAA...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGGAGATGGTTGGTTCTaGTTCTGGGAGTGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEGDGWF*FWEWEW
Trigger: CCACTCCCACTCCCAGAACCAGAACCAACCATCTCC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTATGGATGCTTGGCTGTaGGCCAGGTGCAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISMDAWL*ARCRRL
Trigger: CAACCTTCTGCACCTGGCTCACAGCCAAGCATCCAT...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGTGCCGGACGGGACTTTaGGACATGGATGCTTGGCTG +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLCRTGL*DMDAWL
Trigger: CAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCA...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTGACTGGAGAGGGCATTaGCAAAGGCCTGTGAGCTTG +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISDWRGH*QRPVSL
Trigger: CAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTC...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGCCAGGTGCAGAAGGTTaGCTTGGGAGGCTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLPGAEG*LGRLLD
Trigger: GTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGG...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAA +
Preference number: 2 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVAIVFS*ASCGRK
Trigger: TTTCCTACCACAGGAAGCCCAAGAGAACACTATAGC...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR-3UTR CCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTATGGTACCCACCCCATaGGTGGAGACAGTAGATGGG +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISMVPTP*VETVDG
Trigger: CCCATCTACTGTCTCCACCCATGGGGTGGGTACCAT...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGTTCTCCCCACTTCTGTaGCCTTCCAGCAGACCCCAG +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLFSPLL*PSSRPQ
Trigger: CTGGGGTCTGCTGGAAGGCCACAGAAGTGGGGAGAA...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTATTAGGTTATTGTaGCCCACAGATCTTTTAAGT +
Preference number: 2 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDLIRLL*PTDLLS
Trigger: ACTTAAAAGATCTGTGGGCCACAATAACCTAATAAG...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGGGGGGTGGGTCTGACTaGCCTGGTGTTGGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLGGGSD*PGVGQE
Trigger: CTCCTGACCAACACCAGGCCAGTCAGACCCACCCCC...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTTCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPSQSGH*GSQGPG
Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTCGGGTGCTGGTTGGTTaGCGGGGGAGGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: NMYISTASKLTALFCLLLRVLVG*RGRLLL
Trigger: CAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCG...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGGGCTGCTTGACCCACTaGCGTCTGGGAGGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRGCLTH*RLGGLV
Trigger: CACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCC...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCAGAGCCTGTCCCACCTaGGTCTGGGTCAGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: WVATLTFSSWKHKRHLNARACPT*VWVRPR
Trigger: CCTTGGCCTGACCCAGACTCAGGTGGGACAGGCTCT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLQVLHT*SMAGLS
Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTG...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCAGGAGGTGCGCCGCTTaGGCTTTTTGGATGGTTCAC +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSRRCAA*AFWMVH
Trigger: GTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCT...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCATTTCGGTCATTTCCTaGCCAGAAGGGTGTGTGTTC +
Preference number: 2 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACISVIS*PEGCVF
Trigger: GAACACACACCCTTCTGGGCAGGAAATGACCGAAAT...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCCTGAGTGCCGCTTGCTaGTTGGCTCGATGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: WVATLTFSSWKHKRHLNALSAAC*LARWPW
Trigger: CCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAG...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTATCCACCTCACCCGCTaGCGTTTGAGGATTGCTGAC +
Preference number: 2 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPIHLTR*RLRIAD
Trigger: GTCAGCAATCCTCAAACGGCAGCGGGTGAGGTGGAT...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGTGCAGTTTTTGAGGTaGCGAAAGGGGCTCTGTGAT +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEVQFLR*RKGLCD
Trigger: ATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCAC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCACAAATATTGAGCTTTaGTCCAGCGTAGAGAAACGA +
Preference number: 2 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTTNIEL*SSVEKR
Trigger: TCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGT...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTTGGGTTGGAGATGGTTaGTTCTGGTTCTGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISWVGDG*FWFWEW
Trigger: CCACTCCCAGAACCAGAACCAACCATCTCCAACCCA...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTAGCTTATGCCAGTGTTaGCAGTTCATCGAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLSLCQC*QFIEQS
Trigger: GCTTTGCTCGATGAACTGTCAACACTGGCATAAGCT...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTACGTGGCCAACAGACTaGGAAAAATCCCAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVTWPTD*EKSQAL
Trigger: CAGAGCTTGGGATTTTTCTCAGTCTGTTGGCCACGT...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTG +
Preference number: 2 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLTARAY*LVQLSL
Trigger: CAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGT...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAGGGCTCCAAAGGGACTaGCGTGGCCGGCTCGTGCTG +
Preference number: 2 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRGLQRD*RGRLVL
Trigger: CAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCC...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATTTTTGGAGTCTCTCCTaGATTTCACTAGGATCTGAG +
Preference number: 2 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYFWSLS*ISLGSE
Trigger: CTCAGATCCTAGTGAAATGCAGGAGAGACTCCAAAA...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTTGCCCGCCACCTTTCTaGTCCATTTATATATCCCGA +
Preference number: 2 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLCPPPF*SIYISR
Trigger: TCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCA...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAACTGCAGATGGCCGACTaGCTGTACGCGGGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PSYVILLTSLRRELFLMELQMAD*LYAGPS
Trigger: AGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAG...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCTGGTGTGTCTGCAGATaGCCGACTGGCTGTACGCGG +
Preference number: 2 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFWCVCR*PTGCTR
Trigger: CCGCGTACAGCCAGTCGGCCATCTGCAGACACACCA...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR-3UTR CCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG +
Preference number: 2 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFTGLIF*ALLGVM
Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATCCCCGAAGAGCTTGCTaGGAGTGTCCTCGCTGTCAT +
Preference number: 2 (lower is better)
Translates to: SVDSSSSKALVILESLLHPRRAC*ECPRCH
Trigger: ATGACAGCGAGGACACTCCCAGCAAGCTCTTCGGGG...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGTCTGGGAGGGTTGGTaGAGCTGCTGGCCGGGCTTG +
Preference number: 2 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESVWEGW*SCWPGL
Trigger: CAAGCCCGGCCAGCAGCTCCACCAACCCTCCCAGAC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTGGATTGCTGACTAACTaGCCCACGCTCAAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISGLLTN*PTLKAE
Trigger: TTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAATCC...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp TCCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCTATAGTGTTCTCTTGGGCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: SSFSNLAGYKRPGFS*AVRLLAIVFSWASC
Trigger: ACAGGAAGCCCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR-3UTR TCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATTATTGCAGGCTATTCTaGTTGTTAGATAAGCCCCTT +
Preference number: 2 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYYCRLF*LLDKPL
Trigger: AAGGGGCTTATCTAACAATCAGAATAGCCTGCAATA...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCTGTTTGTGCAGTTTTTaGGGTGGCGAAAGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSCLCSF*GGERGS
Trigger: AGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACA...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCTGCCGGACGGGACTTTaGGACATGGATGCTTGGCTG +
Preference number: 2 (lower is better)
Translates to: WVATLTFSSWKHKRHLNACRTGL*DMDAWL
Trigger: CAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCA...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTGCACACGATCCAGGATaGCCTCCCGTCAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPAHDPG*PPVKKK
Trigger: TTTCTTTTTGACGGGAGGGCATCCTGGATCGTGTGC...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTCAGCTCTCTTTTGCCTaGTCCTTTAATGGAACACCG +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISQLSFA*SFNGTP
Trigger: CGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTG...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACACTTTGAGACATGGATaGTTGGCTGTGAGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYTLRHG*LAVSQV
Trigger: CACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGT...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEVESQG*SLVSVN
Trigger: ATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTGTGAGCCTCACAGAATaGCTTCAACAATGGTACCCA +
Preference number: 2 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVVSLTE*LQQWYP
Trigger: TGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCAC...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATCTGTGCCGTCAGAAGTaGCTGTGGCCCAACTGGAAA +
Preference number: 2 (lower is better)
Translates to: SVDSSSSKALVILESLLHLCRQK*LWPNWK
Trigger: TTTCCAGTTGGGCCACAGCCACTTCTGACGGCACAG...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTCTGAGATGTAGGAGCTaGCGGCTGCTGAGAGGCGGG +
Preference number: 2 (lower is better)
Translates to: NMYISTASKLTALFCLLLLRCRS*RLLRGG
Trigger: CCCGCCTCTCAGCAGCCGCCAGCTCCTACATCTCAG...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCACTGTGGCGATGATCTaGCCCTGGGCGTTTGTGAGG +
Preference number: 2 (lower is better)
Translates to: WVATLTFSSWKHKRHLNATVAMI*PWAFVR
Trigger: CCTCACAAACGCCCAGGGCCAGATCATCGCCACAGT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTGTGAATTTTGCTTCTaGTTATGGGTGGGCATCTCT +
Preference number: 2 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCCEFCF*LWVGIS
Trigger: AGAGATGCCCACCCATAATCAGAAGCAAAATTCACA...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGCTCTGGTGTGGACAGTaGGCACAATTACAGCTTATG +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLLWCGQ*AQLQLM
Trigger: CATAAGCTGTAATTGTGCTCACTGTCCACACCAGAG...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGCCGTTTGAGGATTGCTaGCTAACTGGCCCACGCTCA +
Preference number: 2 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKPFEDC*LTGPRS
Trigger: TGAGCGTGGGCCAGTTAGTCAGCAATCCTCAAACGG...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCTCAGGATGGTGTGTCTaGAGATGGCCGACTGGCTGT +
Preference number: 2 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFSGWCV*RWPTGC
Trigger: ACAGCCAGTCGGCCATCTGCAGACACACCATCCTGA...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR-3UTR GCA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGAACTCGGTCAGGTTCTaGATACCTGCTCGATGGCGG +
Preference number: 2 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLNSVRF*IPARWR
Trigger: CCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGATTTCGGTCATTTCCTaGCCAGAAGGGTGTGTGTTC +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLISVIS*PEGCVF
Trigger: GAACACACACCCTTCTGGGCAGGAAATGACCGAAAT...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCATCCGGCTGCAGCTGCTaGCACCAGCCCTTGGATGTT +
Preference number: 2 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESSGCSC*HQPLDV
Trigger: AACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGA...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCACTTGCAAGCCCTGAGTaGCGCTTGCTGCTTGGCTCG +
Preference number: 2 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESLASPE*RLLLGS
Trigger: CGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAG...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTTTGTTGTTGTTGTTGTaGAGTCCCAAGGGTGGAGTT +
Preference number: 2 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVLLLLL*SPKGGV
Trigger: AACTCCACCCTTGGGACTCCACAACAACAACAACAA...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGT +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISCGRKK*LLRMVC
Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACA...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673891.1
3UTR-3UTR CCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGTCCCAAGCTCTGGTGTaGACAGTGAGCACAATTACA +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLSQALV*TVSTIT
Trigger: TGTAATTGTGCTCACTGTCCACACCAGAGCTTGGGA...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGCCGTCTGCCTGTACCTaGGTGAAAACACCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRPSACT*VKTPVA
Trigger: TGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGG...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGCTGTGCCGTCAGAAGTaGCTGTGGCCCAACTGGAAA +
Preference number: 2 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKLCRQK*LWPNWK
Trigger: TTTCCAGTTGGGCCACAGCCACTTCTGACGGCACAG...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCACTGTGGCGATGATCTaGCCCTGGGCGTTTGTGAGG +
Preference number: 2 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSTVAMI*PWAFVR
Trigger: CCTCACAAACGCCCAGGGCCAGATCATCGCCACAGT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCGCAGCCGCTGCAGCCTaGCTTGCTAGTGGATTATTA +
Preference number: 2 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAAAAAA*LASGLL
Trigger: TAATAATCCACTAGCAAGTCAGGCTGCAGCGGCTGC...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFQVLHT*SMAGLS
Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTG...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGTAGCTTGTAGATTTTaGAGTGGCAGAGTCATAATG +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEVACRF*SGRVIM
Trigger: CATTATGACTCTGCCACTGCAAAATCTACAAGCTAC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLVESQG*SLVSVN
Trigger: ATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSVFFSK*ALRISR
Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTCCAAAGGGACTGCCGTaGCCGGCTCGTGCTGTTTTA +
Preference number: 2 (lower is better)
Translates to: NMYISTASKLTALFCLLLPKGLP*PARAVL
Trigger: TAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGG...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCGAATGGCTTCAACAATaGTACCCACCCCATGGGTGG +
Preference number: 2 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAEWLQQ*YPPHGW
Trigger: CCACCCATGGGGTGGGTACCATTGTTGAAGCCATTC...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGTGCTGCATGAATCATTaGAGGGGACAATTATACTGT +
Preference number: 2 (lower is better)
Translates to: NSEPHRMASTMVPTPWVECCMNH*RGQLYC
Trigger: ACAGTATAATTGTCCCCTCCAATGATTCATGCAGCA...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTTTCTGGTTCTGGGAGTaGGAGTGGGGTTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: NMYISTASKLTALFCLLLFWFWE*EWGWCC
Trigger: GCAGCACCAACCCCACTCCCACTCCCAGAACCAGAA...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTGCTATGGAGCTCATaGCTGCTGCAGCCGCTGCAG +
Preference number: 2 (lower is better)
Translates to: PSYVILLTSLRRELFLMELLWSS*LLQPLQ
Trigger: CTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAA...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTTGGATTAGGCATCAGTaGAATGGTCCCGATAATCTG +
Preference number: 2 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPWIRHQ*NGPDNL
Trigger: CAGATTATCGGGACCATTCCACTGATGCCTAATCCA...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTGCGTTTGTGAGGAGCTaGGGGGTGATTGGCTGCACT +
Preference number: 2 (lower is better)
Translates to: NMYISTASKLTALFCLLLAFVRS*GVIGCT
Trigger: AGTGCAGCCAATCACCCCCCAGCTCCTCACAAACGC...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp TCCTTTCCCCTGAAGAACCTGGCCCCCAATTCCAGTTGTTTAAATTaGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAAT +
Preference number: 2 (lower is better)
Translates to: SFPLKNLAPNSSCLN*PATFLLHLYIPKSN
Trigger: ATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCCAGGTTCTTCAGGGGAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp TCTTCAAACTTCCTTTCCCCTGAAGAACCTGGCCCCCAATTCCAGTaGTTTAAATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCC +
Preference number: 2 (lower is better)
Translates to: SSNFLSPEEPGPQFQ*FKFARHLSAPFIYP
Trigger: GGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCCAGGTTCTTCAGGGGAAAGGAAGTTTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp GCCAAGTGCTCACCTGCACAGCCGTCCTCACATCCCAACATGTCCTaGCTTATTAGGTTATTGTGGCCCACAGATCTTTTAAGTTATTTT +
Preference number: 2 (lower is better)
Translates to: AKCSPAQPSSHPNMS*LIRLLWPTDLLSYF
Trigger: AAAATAACTTAAAAGATCTGTGGGCCACAATAACCTAATAAGCAAGGACATGTTGGGATGTGAGGACGGCTGTGCAGGTGAGCACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGAGTAATTATTCCCCCTaGAAAAAGTCTGCCATCGCT +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLSNYSP*KKSAIA
Trigger: AGCGATGGCAGACTTTTTTCAGGGGGAATAATTACT...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTTATTGCAGGCTATTCTaGTTGTTAGATAAGCCCCTT +
Preference number: 2 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVYCRLF*LLDKPL
Trigger: AAGGGGCTTATCTAACAATCAGAATAGCCTGCAATA...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTTATACCTACAAATATTaGGCTTTGGTCCAGCGTAGA +
Preference number: 2 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISYTYKY*ALVQRR
Trigger: TCTACGCTGGACCAAAGCTCAATATTTGTAGGTATA...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATGACGAACGATCGCGTTaGAATGCCATGTTTCTGACT +
Preference number: 2 (lower is better)
Translates to: SVDSSSSKALVILESLLHDERSR*NAMFLT
Trigger: AGTCAGAAACATGGCATTGCAACGCGATCGTTCGTC...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCACAGCAGAAGCTAACTaGTGTGCCGTCAGAAGTGGC +
Preference number: 2 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSTAEAN*CAVRSG
Trigger: GCCACTTCTGACGGCACAGCAGTTAGCTTCTGCTGT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG +
Preference number: 2 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRTGLIF*ALLGVM
Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCGTCTGCCATCGCTATTaGAATGAAAGAAGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSVCHRY*NERSSR
Trigger: TCTGCTACTTCTTTCATTCCAATAGCGATGGCAGAC...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCGTGCAGTTTTTGAGGTaGCGAAAGGGGCTCTGTGAT +
Preference number: 2 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAVQFLR*RKGLCD
Trigger: ATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCAC...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCGTGCCGCTTGCTGCTTaGCTCGATGGCCCTGGATTA +
Preference number: 2 (lower is better)
Translates to: QFSIARLSATFSHIYTMCVPLAA*LDGPGL
Trigger: TAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCAC...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGCAACAGCAAGCAAATTaGCAGCTCTCTTTTGCCTGC +
Preference number: 2 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKQQQAN*QLSFAC
Trigger: GCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTG...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTATGGATGCTTGGCTGTaGGCCAGGTGCAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFMDAWL*ARCRRL
Trigger: CAACCTTCTGCACCTGGCTCACAGCCAAGCATCCAT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTATCCACCTCACCCGCTaGCGTTTGAGGATTGCTGAC +
Preference number: 2 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFIHLTR*RLRIAD
Trigger: GTCAGCAATCCTCAAACGGCAGCGGGTGAGGTGGAT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATTCACTAGGATCTGAGTaGAAAAGACACTGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: SVDSSSSKALVILESLLHSLGSE*KRHCFS
Trigger: GGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGA...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGTCCCAAGCTCTGGTGTaGACAGTGAGCACAATTACA +
Preference number: 2 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKSQALV*TVSTIT
Trigger: TGTAATTGTGCTCACTGTCCACACCAGAGCTTGGGA...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCTGGAGCTGCTGGAGCTaGGAGTTCAGGGATGAGGTA +
Preference number: 2 (lower is better)
Translates to: QFSIARLSATFSHIYTMCWSCWS*EFRDEV
Trigger: TACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCA...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTGGAGATGGTTGGTTCTaGTTCTGGGAGTGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFGDGWF*FWEWEW
Trigger: CCACTCCCACTCCCAGAACCAGAACCAACCATCTCC...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGGAGCTCTGCTGGGTTaGAGATGGTTGGTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESGALLG*RWLVLV
Trigger: AACCAGAACCAACCATCTCCAACCCAGCAGAGCTCC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTATCACGGGCAGGATCTaGTTCCCAATGACTGTGGCG +
Preference number: 2 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFITGRI*FPMTVA
Trigger: CGCCACAGTCATTGGGAACCAGATCCTGCCCGTGAT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTTCAGCACTTAGTACCTaGAGGGGTGCAGTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFSALST*RGAVLP
Trigger: AGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTGA...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGCTCTTGATTGCTGCATaGATCATTGGAGGGGACAAT +
Preference number: 2 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKLLIAA*IIGGDN
Trigger: ATTGTCCCCTCCAATGATTCATGCAGCAATCAAGAG...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCACATTTCACTCCGCACTaGCAGCAAGGGCTTACTGAC +
Preference number: 2 (lower is better)
Translates to: EILRHFFGYQTSERNCFAHFTPH*QQGLTD
Trigger: GTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATG...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGGCCTTATGTAACCGCTaGCGGCATATATTTAAATAT +
Preference number: 2 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLALCNR*RHIFKY
Trigger: ATATTTAAATATATGCCGGCAGCGGTTACATAAGGC...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCTTGTTGTTGTTGTTGTaGAGTCCCAAGGGTGGAGTT +
Preference number: 2 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFLLLLL*SPKGGV
Trigger: AACTCCACCCTTGGGACTCCACAACAACAACAACAA...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCCTTGCGCTTTTTGGATaGTTCACTCCCGATAAACTC +
Preference number: 2 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFLALFG*FTPDKL
Trigger: GAGTTTATCGGGAGTGAACCATCCAAAAAGCGCAAG...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG +
Preference number: 2 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRVFFSK*ALRISR
Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCCACACACCTTCAGTGTaGTGTATTCCTTGTTTAAAA +
Preference number: 2 (lower is better)
Translates to: VWTVSTITAYASVDSSSSHTPSV*CIPCLK
Trigger: TTTTAAACAAGGAATACACCACACTGAAGGTGTGTG...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCTGGGTTGGAGATGGTTaGTTCTGGTTCTGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: QFSIARLSATFSHIYTMCWVGDG*FWFWEW
Trigger: CCACTCCCAGAACCAGAACCAACCATCTCCAACCCA...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 90 bp GTGATGTTGGCATTGAAGATCAAGTTAGCTGTGGTCCAGTTAGCATaGACTGGTAAAATGGAAACACCTTTACGAGTGACTTGTTCCACT +
Preference number: 2 (lower is better)
Translates to: VMLALKIKLAVVQLA*TGKMETPLRVTCST
Trigger: AGTGGAACAAGTCACTCGTAAAGGTGTTTCCATTTTACCAGTCAATGCTAACTGGACCACAGCTAACTTGATCTTCAATGCCAACATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCAGCCGTGGCCGGCTCGTaGTGTTTTAAGCGTTTAATT +
Preference number: 2 (lower is better)
Translates to: EILRHFFGYQTSERNCFAAVAGS*CFKRLI
Trigger: AATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCAGCACACGATCCAGGATaGCCTCCCGTCAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: EILRHFFGYQTSERNCFAAHDPG*PPVKKK
Trigger: TTTCTTTTTGACGGGAGGGCATCCTGGATCGTGTGC...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTAGTCCTTCCTCCAGGTaGCAGGCTTGTATTCGCTTT +
Preference number: 2 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFSPSSR*QACIRF
Trigger: AAAGCGAATACAAGCCTGCCACCTGGAGGAAGGACT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGTGAGCCTCACAGAATaGCTTCAACAATGGTACCCA +
Preference number: 2 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESVSLTE*LQQWYP
Trigger: TGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCAC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCATCACTGCACATGAATaGTGTTACGACTGTCGGATG +
Preference number: 2 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSITAHE*CYDCRM
Trigger: CATCCGACAGTCGTAACACCATTCATGTGCAGTGAT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCTTGTCCAGCTATCATTaGATCCTGAAGAAGAGCACT +
Preference number: 2 (lower is better)
Translates to: WVATLTFSSWKHKRHLNALSSYH*ILKKST
Trigger: AGTGCTCTTCTTCAGGATCCAATGATAGCTGGACAA...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCAGTAATTATTCCCCCTaGAAAAAGTCTGCCATCGCT +
Preference number: 2 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSSNYSP*KKSAIA
Trigger: AGCGATGGCAGACTTTTTTCAGGGGGAATAATTACT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGTATTGCAGGCTATTCTaGTTGTTAGATAAGCCCCTT +
Preference number: 2 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRYCRLF*LLDKPL
Trigger: AAGGGGCTTATCTAACAATCAGAATAGCCTGCAATA...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGCTATCATTGGATCCTaGAGAAGAGCACTCATTTGC +
Preference number: 2 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESAIIGS*RRALIC
Trigger: GCAAATGAGTGCTCTTCTTCAGGATCCAATGATAGC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCAGAAGAGCACTCATTTaGCACTTCCTCTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSRRALI*HFLLDH
Trigger: ATGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGGTAGCTTGTAGATTTTaGAGTGGCAGAGTCATAATG +
Preference number: 2 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRVACRF*SGRVIM
Trigger: CATTATGACTCTGCCACTGCAAAATCTACAAGCTAC...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCGTGAGCCTCACAGAATaGCTTCAACAATGGTACCCA +
Preference number: 2 (lower is better)
Translates to: QFSIARLSATFSHIYTMCVSLTE*LQQWYP
Trigger: TGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCAC...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGAAAGTTTTGGGTTTCTaGGTTGTCCATGTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKKVLGF*VVHVCA
Trigger: TGCACAAACATGGACAACCCAGAAACCCAAAACTTT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATGGCTATCAGACTTCTaGGAGAAATTGCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: PSYVILLTSLRRELFLMEWLSDF*EKLLCT
Trigger: TGTGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCA...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTGCTGGTAGTCTCTTaGTTGCTGCATGAATCATTG +
Preference number: 2 (lower is better)
Translates to: PSYVILLTSLRRELFLMELLVVS*LLHESL
Trigger: CAATGATTCATGCAGCAATCAAGAGACTACCAGCAA...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTAAAAATCACTGCACATaGATGGTGTTACGACTGTCG +
Preference number: 2 (lower is better)
Translates to: NMYISTASKLTALFCLLLKNHCT*MVLRLS
Trigger: CGACAGTCGTAACACCATTCATGTGCAGTGATTTTT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCGTACAAGTAGAGTGCTaGGGTAAAACATTGATGAAC +
Preference number: 2 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSVQVEC*GKTLMN
Trigger: GTTCATCAATGTTTTACCTCAGCACTCTACTTGTAC...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR GCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTGTGTTCTTCAGGGCTTaGCTCTTATTGCAGAACCAA +
Preference number: 2 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFVFFRA*LLLQNQ
Trigger: TTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACAC...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR TCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGGCTTGTATTCGCTTTaGACAGATCAAAGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESGLYSL*TDQSFC
Trigger: ACAAAAACTTTGATCTGTTCAAAGCGAATACAAGCC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGATTTGCCACTTCCTCTTaGATCATTATAAGAACATTC +
Preference number: 2 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRFATSS*IIIRTF
Trigger: GAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp GGGCGCCTGTGGGGCTGGTTGCGGGTGCTGGTTGGTTaGCGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GRLWGWLRVLVG*RGRLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp GCGAGGGCGCCTGTGGGGCTGGTTGCGGGTGCTGGTTaGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: ARAPVGLVAGAG*LTGEAAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCCTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TGCGGGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGGAGCTGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: CGCWLVDGGGCC*CCCCCCWSWSW
Trigger: CCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp GGTTGCGGGTGCTGGTTGGTTGACGGGGGAGGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGGAGCTGGAGC +
Preference number: 3 (lower is better)
Translates to: GCGCWLVDGGGC*CCCCCCCWSWS
Trigger: GCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp GCTGGTTGCGGGTGCTGGTTGGTTGACGGGGGAGGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: AGCGCWLVDGGG*CCCCCCCCWSW
Trigger: CCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGGAGCTGGAGCTGGAGCTGCTGGAGC +
Preference number: 3 (lower is better)
Translates to: LVDGGGCCCCCC*CCWSWSWSCWS
Trigger: GCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGGAGCTGGAGCTGGAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: WLVDGGGCCCCC*CCCWSWSWSCW
Trigger: CCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGGAGCTGGAGCTGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: CWLVDGGGCCCC*CCCCWSWSWSC
Trigger: GCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp GTGCAGAAGGTTGCCTTGGGAGGCTGCTTGACCCACTaGCGTCTGGGAGGGTTGGTGGAGCTGCTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: VQKVALGGCLTH*RLGGLVELLAG
Trigger: CCCGGCCAGCAGCTCCACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp CCTCCCGGCATCACGCCGGCCACAGCAGAAGCTAACTaGTGTGCCGTCAGAAGTGGCTGTGGCCCAACTGGA +
Preference number: 3 (lower is better)
Translates to: PPGITPATAEAN*CAVRSGCGPTG
Trigger: TCCAGTTGGGCCACAGCCACTTCTGACGGCACAGCAGTTAGCTTCTGCTGTGGCCGGCGTGATGCCGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp TGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTaGCTGTACGCGGGGCCCTCTGTAGCACTGAGAGCC +
Preference number: 3 (lower is better)
Translates to: WLLRMVCLQMAD*LYAGPSVALRA
Trigger: GGCTCTCAGTGCTACAGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR CCA 72 bp CTGTGCCGTCAGAAGTGGCTGTGGCCCAACTGGAAATaGGGGGTGGGTCTGACTGGCCTGGTGTTGGTCAGG +
Preference number: 3 (lower is better)
Translates to: LCRQKWLWPNWK*GVGLTGLVLVR
Trigger: CCTGACCAACACCAGGCCAGTCAGACCCACCCCCCATTTCCAGTTGGGCCACAGCCACTTCTGACGGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGGAGCTGGAGCTaGAGCTGCTGGAGCTGGGAGTTCAGGGATGAGGTA +
Preference number: 3 (lower is better)
Translates to: CCCCCCCCWSWS*SCWSWEFRDEV
Trigger: TACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTGGGTTGGAGATGGTaGGTTCTGGTTCTGGGAGTG +
Preference number: 3 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDLGWRW*VLVLGV
Trigger: CACTCCCAGAACCAGAACCAACCATCTCCAACCCAG...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp CCCCTGAAGACTGGAGAGGGCATTGCCAAAGGCCTGTaGGCTTGCTATGGAGCTCATGGCTGCTGCAGCCGC +
Preference number: 3 (lower is better)
Translates to: PLKTGEGIAKGL*ACYGAHGCCSR
Trigger: GCGGCTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCTTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TGCTGCTGCTGCTGCTGCTGGAGCTGGAGCTGGAGCTaGTGGAGCTGGGAGTTCAGGGATGAGGTAGCTTGT +
Preference number: 3 (lower is better)
Translates to: CCCCCCWSWSWS*WSWEFRDEVAC
Trigger: ACAAGCTACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp CCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGC +
Preference number: 3 (lower is better)
Translates to: PINSVRFCIPAR*RASASAIHRSS
Trigger: GCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp TGGAGAGGGCATTGCCAAAGGCCTGTGAGCTTGCTATaGAGCTCATGGCTGCTGCAGCCGCTGCAGCCTGAC +
Preference number: 3 (lower is better)
Translates to: WRGHCQRPVSLL*SSWLLQPLQPD
Trigger: GTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAATGCCCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp TGCTGGCCGGGCTTGATGGGTGACAGCGTGATGCCCTaGGTGTTGATCACGGGCAGGATCTGGTTCCCAATG +
Preference number: 3 (lower is better)
Translates to: CWPGLMGDSVMP*VLITGRIWFPM
Trigger: CATTGGGAACCAGATCCTGCCCGTGATCAACACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATGGCCCCCAATTCCAGTaGTTTAAATTTGCCCGCCAC +
Preference number: 3 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDGPQFQ*FKFARH
Trigger: GTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCC...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TTTGGCAAATTCTCGGATCTCCTCCAGATTAACCCCATCCACCTCACCCGCTGCGGTTGCGGGTGCTGGTaGGTTGACGGGGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: FGKFSDLLQINPIHLTRCGCGCW*VDGGGC
Trigger: GCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACC...GCAGCGGGTGAGGTGGATGGGGTTAATCTGGAGGAGATCCGAGAATTTGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGCCTCAGCCATCCACCG +
Preference number: 3 (lower is better)
Translates to: FTPDKLGQVLHT*SMAGLSLSHPP
Trigger: CGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp GATTGGCTGCACTTGCAAGCCCTGAGTGCCGCTTGCTaGTTGGCTCGATGGCCCTGGATTAGGCATCAGTGG +
Preference number: 3 (lower is better)
Translates to: DWLHLQALSAAC*LARWPWIRHQW
Trigger: CCACTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTGCAGCCAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp ACATGGATGCTTGGCTGTGAGCCAGGTGCAGAAGGTTaGCTTGGGAGGCTGCTTGACCCACTGACGTCTGGG +
Preference number: 3 (lower is better)
Translates to: TWMLGCEPGAEG*LGRLLDPLTSG
Trigger: CCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGGCTCACAGCCAAGCATCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp TGCTGCTGCTGCTGCTGGAGCTGGAGCTGGAGCTGCTaGAGCTGGGAGTTCAGGGATGAGGTAGCTTGTAGA +
Preference number: 3 (lower is better)
Translates to: CCCCCWSWSWSC*SWEFRDEVACR
Trigger: TCTACAAGCTACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp GTGATGTCCAGCTTTTCAAACCTGCAGATGGCCGACTaGCTGTACGCGGGGCCCTCTGTAGCACTGAGAGCC +
Preference number: 3 (lower is better)
Translates to: VMSSFSNLQMAD*LYAGPSVALRA
Trigger: GGCTCTCAGTGCTACAGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAGGTTTGAAAAGCTGGACATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674059.1
3UTR-3UTR CAA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATCTAGCCCCGAAGAGCTaGCTGGGAGTGTCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYLAPKS*LGVSSL
Trigger: CAGCGAGGACACTCCCAGCAAGCTCTTCGGGGCTAG...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp CCCGAAGAGCTTGCTGGGAGTGTCCTCGCTGTCATTTaGTTCCACAGGCGCAAGCAGGGGCTCATTCAGCTC +
Preference number: 3 (lower is better)
Translates to: PEELAGSVLAVI*FHRRKQGLIQL
Trigger: GAGCTGAATGAGCCCCTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACACTCCCAGCAAGCTCTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTaGATACCTGCTCGATGGCGGGCCTCAGCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: LDGSLPINSVRF*IPARWRASASA
Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TTGCAGTGGCAGAGTCATAATGCCTCCGGCTGCAGCTaGTGCCACCAGCCCTTGGATGTTGGTGAGATTCGC +
Preference number: 3 (lower is better)
Translates to: LQWQSHNASGCS*CHQPLDVGEIR
Trigger: GCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATGACTCTGCCACTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp AGAGGAAGCCTGCCGGACGGGACTTTGAGACATGGATaGTTGGCTGTGAGCCAGGTGCAGAAGGTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: RGSLPDGTLRHG*LAVSQVQKVAL
Trigger: CAAGGCAACCTTCTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAGGCTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp CTGCCTGCTCCGGGCACGGAGAAGCAGATCTCTTTGTaGTGCCTCATAAGTGACCCCGGTGACCAGTCTAGA +
Preference number: 3 (lower is better)
Translates to: LPAPGTEKQISL*CLISDPGDQSR
Trigger: TCTAGACTGGTCACCGGGGTCACTTATGAGGCACCACAAAGAGATCTGCTTCTCCGTGCCCGGAGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp GCCCTGAGTGCCGCTTGCTGCTTGGCTCGATGGCCCTaGATTAGGCATCAGTGGAATGGTCCCGATAATCTG +
Preference number: 3 (lower is better)
Translates to: ALSAACCLARWP*IRHQWNGPDNL
Trigger: CAGATTATCGGGACCATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp TTGCAAGCCCTGAGTGCCGCTTGCTGCTTGGCTCGATaGCCCTGGATTAGGCATCAGTGGAATGGTCCCGAT +
Preference number: 3 (lower is better)
Translates to: LQALSAACCLAR*PWIRHQWNGPD
Trigger: ATCGGGACCATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCT +
Preference number: 3 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVRPGFS*AVRLLA
Trigger: AGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCT...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR-3UTR CAA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATCTGCCGGACGGGACTTaGAGACATGGATGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYLPDGT*RHGCLA
Trigger: AGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAG...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp GGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCTaGACAGCCGTCCTCACATCCCAACATGTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: GENTSGSCQVLT*TAVLTSQHVLA
Trigger: AGCAAGGACATGTTGGGATGTGAGGACGGCTGTGCAGGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp CCTGCTCCGGGCACGGAGAAGCAGATCTCTTTGTGGTaGCTCATAAGTGACCCCGGTGACCAGTCTAGATCA +
Preference number: 3 (lower is better)
Translates to: PAPGTEKQISLW*LISDPGDQSRS
Trigger: TGATCTAGACTGGTCACCGGGGTCACTTATGAGGCACCACAAAGAGATCTGCTTCTCCGTGCCCGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp GTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCCTTaGTGGCCTCCTAGCTGTCCCGCCATGTTGAAGGGA +
Preference number: 3 (lower is better)
Translates to: VRFAVGSVRTSP*WPPSCPAMLKG
Trigger: TCCCTTCAACATGGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp AAGAAGAGGAAGCCTGCCGGACGGGACTTTGAGACATaGATGCTTGGCTGTGAGCCAGGTGCAGAAGGTTGC +
Preference number: 3 (lower is better)
Translates to: KKRKPAGRDFET*MLGCEPGAEGC
Trigger: GCAACCTTCTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAGGCTTCCTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCCGCAGGGAGCTTTTCTaGATGGAATTTGGAGCAGGT +
Preference number: 3 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTRRELF*MEFGAG
Trigger: ACCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCG...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp AGATTCGCTGTTGGCAGTGTGAGAACCAGTCCTTGCTaGCCTCCTAGCTGTCCCGCCATGTTGAAGGGAATG +
Preference number: 3 (lower is better)
Translates to: RFAVGSVRTSPC*PPSCPAMLKGM
Trigger: CATTCCCTTCAACATGGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACGGGCTGAGGCGCCTGTaGCAGCTGAGATGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYGLRRL*QLRCRS
Trigger: GCTCCTACATCTCAGCTGCAACAGGCGCCTCAGCCC...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGAGCTGCTGGCCGGGCTaGATGGGTGACAGCGTGATG +
Preference number: 3 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLSCWPG*MGDSVM
Trigger: CATCACGCTGTCACCCATCAAGCCCGGCCAGCAGCT...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp GCTATGGAGCTCATGGCTGCTGCAGCCGCTGCAGCCTaGCTTGCTAGTGGATTATTAACCAGCTGTAGAGGA +
Preference number: 3 (lower is better)
Translates to: AMELMAAAAAAA*LASGLLTSCRG
Trigger: TCCTCTACAGCTGGTTAATAATCCACTAGCAAGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCAGGGCTTGCCTCTTATaGCAGAACCAAACTCTAACT +
Preference number: 3 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCRACLL*QNQTLT
Trigger: AGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCT...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCAAGAAGAGCACTCATTaGCCACTTCCTCTTGGATCA +
Preference number: 3 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCKKSTH*PLPLGS
Trigger: TGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCTT...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGAGCTGTCCCGCCATGTaGAAGGGAATGAGGATTGGC +
Preference number: 3 (lower is better)
Translates to: NSEPHRMASTMVPTPWVESCPAM*KGMRIG
Trigger: GCCAATCCTCATTCCCTTCAACATGGCGGGACAGCT...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGAGACTGGAGAGGGCATaGCCAAAGGCCTGTGAGCTT +
Preference number: 3 (lower is better)
Translates to: NSEPHRMASTMVPTPWVERLERA*PKACEL
Trigger: AAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCT...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTAGTGCCGCTTGCTGCTaGGCTCGATGGCCCTGGATT +
Preference number: 3 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPSAACC*ARWPWI
Trigger: AATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACT...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGG +
Preference number: 3 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPVMPWV*ITGRIW
Trigger: CCAGATCCTGCCCGTGATCAACACCCAGGGCATCAC...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp GTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTaGTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCT +
Preference number: 3 (lower is better)
Translates to: VKGSKGTAVAGS*CFKRLIVFFRA
Trigger: AGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCATTTTGTTGTTGTTGTaGTTGTGGAGTCCCAAGGGT +
Preference number: 3 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSILLLL*LWSPKG
Trigger: ACCCTTGGGACTCCACAACAACAACAACAACAAAAT...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCCATCCCAACATGTCCTaGCTTATTAGGTTATTGTGG +
Preference number: 3 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCHPNMS*LIRLLW
Trigger: CCACAATAACCTAATAAGCAAGGACATGTTGGGATG...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATCAAGGGCTTACTGACTaGTCCAGCTATCATTGGATC +
Preference number: 3 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYQGLTD*SSYHWI
Trigger: GATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTG...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGTGCTGCCACCAGCCCTaGGATGTTGGTGAGATTCGC +
Preference number: 3 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLCCHQP*DVGEIR
Trigger: GCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCA...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCT +
Preference number: 3 (lower is better)
Translates to: VWTVSTITAYASVDSSSSRPGFS*AVRLLA
Trigger: AGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCT...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673891.1
3UTR-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACCGCCGCTTGCGCTTTTaGGATGGTTCACTCCCGATA +
Preference number: 3 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYRRLRF*DGSLPI
Trigger: TATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCG...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCATTCAGTTTGGCTTCTaGGTCACAAGTCTATCATGT +
Preference number: 3 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTIQFGF*VTSLSC
Trigger: ACATGATAGACTTGTGACCAAGAAGCCAAACTGAAT...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTTGTCCTCGCTGTCATTaGATTCCACAGGCGCAAGCA +
Preference number: 3 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISCPRCH*IPQAQA
Trigger: TGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACA...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACACCAGCCCTTGGATGTaGGTGAGATTCGCTGTTGGC +
Preference number: 3 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYTSPWM*VRFAVG
Trigger: GCCAACAGCGAATCTCACCAACATCCAAGGGCTGGT...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp GTTTTGGTCAGCTCTCCATGTACGTGGCCAACAGACTaGGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGC +
Preference number: 3 (lower is better)
Translates to: VLVSSPCTWPTD*EKSQALVWTVS
Trigger: GCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGCCACGTACATGGAGAGCTGACCAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp TGCTGCTTGGCTCGATGGCCCTGGATTAGGCATCAGTaGAATGGTCCCGATAATCTGTCCTTGTGCATTAGT +
Preference number: 3 (lower is better)
Translates to: CCLARWPWIRHQ*NGPDNLSLCIS
Trigger: ACTAATGCACAAGGACAGATTATCGGGACCATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACGGCCCCCAATTCCAGTaGTTTAAATTTGCCCGCCAC +
Preference number: 3 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYGPQFQ*FKFARH
Trigger: GTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCC...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCTTGCTTATTAGGTTATaGTGGCCCACAGATCTTTTA +
Preference number: 3 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTLLIRL*WPTDLL
Trigger: TAAAAGATCTGTGGGCCACAATAACCTAATAAGCAA...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATTTGCTGCATGAATCATaGGAGGGGACAATTATACTG +
Preference number: 3 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYLLHES*EGTIIL
Trigger: CAGTATAATTGTCCCCTCCAATGATTCATGCAGCAA...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATGTGGTCCAGTTAGCATaGACTGGTAAAATGGAAACA +
Preference number: 3 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYVVQLA*TGKMET
Trigger: TGTTTCCATTTTACCAGTCAATGCTAACTGGACCAC...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGCTTGTCCAGCTATCATaGGATCCTGAAGAAGAGCAC +
Preference number: 3 (lower is better)
Translates to: NSEPHRMASTMVPTPWVELVQLS*DPEEEH
Trigger: GTGCTCTTCTTCAGGATCCAATGATAGCTGGACAAG...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCCAAGGGCTTACTGACTaGTCCAGCTATCATTGGATC +
Preference number: 3 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCQGLTD*SSYHWI
Trigger: GATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTG...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCGCGGGTGCTGGTTGGTaGACGGGGGAGGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: QFSIARLSATFSHIYTMCAGAGW*TGEAAA
Trigger: AGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGC...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp CTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGACTTGTCCAGCTATCAT +
Preference number: 3 (lower is better)
Translates to: LTSQLRIHFTPH*QQGLTDLSSYH
Trigger: ATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTAGACGAACGATCGCGTaGCAATGCCATGTTTCTGAC +
Preference number: 3 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPRRTIA*QCHVSD
Trigger: GTCAGAAACATGGCATTGCAACGCGATCGTTCGTCT...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGGCATTTCTAATCAGTaGGGCAACTTGAGATTGGGT +
Preference number: 3 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEGISNQ*GNLRLG
Trigger: ACCCAATCTCAAGTTGCCCAACTGATTAGAAATGCC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCATGTTTGTGCAGTTTTaGAGGTGGCGAAAGGGGCTC +
Preference number: 3 (lower is better)
Translates to: VWTVSTITAYASVDSSSSMFVQF*RWRKGL
Trigger: GAGCCCCTTTCGCCACCTCAAAAACTGCACAAACAT...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCGTGCAGAAGGTTGCCTaGGGAGGCTGCTTGACCCAC +
Preference number: 3 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSVQKVA*GGCLTH
Trigger: GTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCAC...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp GTTAATAGGTTTCATAGTGAATCAGCACTTAGTACCTaGAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: VNRFHSESALST*RGAVLPPGGRL
Trigger: AAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTGATTCACTATGAAACCTATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp TTTGGGTTTCTGGGTTGTCCATGTTTGTGCAGTTTTTaGGGTGGCGAAAGGGGCTCTGTGATGTTGGCATTG +
Preference number: 3 (lower is better)
Translates to: FGFLGCPCLCSF*GGERGSVMLAL
Trigger: CAATGCCAACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCCAGAAACCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp AGTTTGGCTGTCAGACTGCTAGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGG +
Preference number: 3 (lower is better)
Translates to: SLAVRLLAIVFS*ASCGRKKWLLR
Trigger: CCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
3UTR-3UTR CAA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCCGCCGCTTGCGCTTTTaGGATGGTTCACTCCCGATA +
Preference number: 3 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFRRLRF*DGSLPI
Trigger: TATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCG...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGAAGGAGGTGCGCCGCTaGCGCTTTTTGGATGGTTCA +
Preference number: 3 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLKEVRR*RFLDGS
Trigger: TGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTT...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCAAGGAGGTGCGCCGCTaGCGCTTTTTGGATGGTTCA +
Preference number: 3 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAKEVRR*RFLDGS
Trigger: TGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCCAGCTTATGCCAGTGTaGACAGTTCATCGAGCAAAG +
Preference number: 3 (lower is better)
Translates to: VWTVSTITAYASVDSSSSQLMPV*TVHRAK
Trigger: CTTTGCTCGATGAACTGTCAACACTGGCATAAGCTG...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGAGTGGCTTTTATTTTTaGTGGGTGGCAACCTTAACC +
Preference number: 3 (lower is better)
Translates to: NSEPHRMASTMVPTPWVESGFYF*WVATLT
Trigger: GGTTAAGGTTGCCACCCACAAAAAATAAAAGCCACT...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAGGTGATTGGCTGCACTaGCAAGCCCTGAGTGCCGCT +
Preference number: 3 (lower is better)
Translates to: PSYVILLTSLRRELFLMEGDWLH*QALSAA
Trigger: AGCGGCACTCAGGGCTTGCAAGTGCAGCCAATCACC...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTCGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCC +
Preference number: 3 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLRILKA*ANSRIS
Trigger: GGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCAGGGCTTGCCTCTTATaGCAGAACCAAACTCTAACT +
Preference number: 3 (lower is better)
Translates to: VWTVSTITAYASVDSSSSRACLL*QNQTLT
Trigger: AGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCT...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTAAAGCCCTAGTTATTTaGGAGTCTCTCCTGCATTTC +
Preference number: 3 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISKALVI*ESLLHF
Trigger: GAAATGCAGGAGAGACTCCAAAATAACTAGGGCTTT...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCGGTGATTGGCTGCACTaGCAAGCCCTGAGTGCCGCT +
Preference number: 3 (lower is better)
Translates to: QFSIARLSATFSHIYTMCGDWLH*QALSAA
Trigger: AGCGGCACTCAGGGCTTGCAAGTGCAGCCAATCACC...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGG +
Preference number: 3 (lower is better)
Translates to: QFSIARLSATFSHIYTMCVMPWV*ITGRIW
Trigger: CCAGATCCTGCCCGTGATCAACACCCAGGGCATCAC...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp CATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTGGATCCTGAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: HSFHSALTARAY*LVQLSLDPEEE
Trigger: CTCTTCTTCAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp GTTTCTGGGTTGTCCATGTTTGTGCAGTTTTTGAGGTaGCGAAAGGGGCTCTGTGATGTTGGCATTGAAGAT +
Preference number: 3 (lower is better)
Translates to: VSGLSMFVQFLR*RKGLCDVGIED
Trigger: ATCTTCAATGCCAACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCCAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTAACCATTCTGTCCACTaGGTAGTTTTCTTAGTCATT +
Preference number: 3 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLNHSVH*VVFLVI
Trigger: AATGACTAAGAAAACTACCAAGTGGACAGAATGGTT...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGCCATGTTTCTGACTTaGGTTAATAGGTTTCATAGT +
Preference number: 3 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEAMFLT*VNRFHS
Trigger: ACTATGAAACCTATTAACCAAAGTCAGAAACATGGC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGAGACGAACGATCGCGTaGCAATGCCATGTTTCTGAC +
Preference number: 3 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKRRTIA*QCHVSD
Trigger: GTCAGAAACATGGCATTGCAACGCGATCGTTCGTCT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTCATTCTTTCAGCATCTaGACAGTAAACAGCAAACAG +
Preference number: 3 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVHSFSI*TVNSKQ
Trigger: CTGTTTGCTGTTTACTGTCAAGATGCTGAAAGAATG...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp CAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTaGGCACAATTACAGCTTATGCCAGTGTTGACAGTT +
Preference number: 3 (lower is better)
Translates to: QTEKNPKLWCGQ*AQLQLMPVLTV
Trigger: AACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp CTTTACGTGCGGAGAAGCGTAGACGAACGATCGCGTTaGAATGCCATGTTTCTGACTTTGGTTAATAGGTTT +
Preference number: 3 (lower is better)
Translates to: LYVRRSVDERSR*NAMFLTLVNRF
Trigger: AAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGATCGTTCGTCTACGCTTCTCCGCACGTAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAACCATTCTGTCCACTaGGTAGTTTTCTTAGTCATT +
Preference number: 3 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFNHSVH*VVFLVI
Trigger: AATGACTAAGAAAACTACCAAGTGGACAGAATGGTT...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTGCCATGTTTCTGACTTaGGTTAATAGGTTTCATAGT +
Preference number: 3 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISAMFLT*VNRFHS
Trigger: ACTATGAAACCTATTAACCAAAGTCAGAAACATGGC...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGTCCAGTTGTTTAAATTaGCCCGCCACCTTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRSSCLN*PATFLL
Trigger: GAGCAGAAAGGTGGCGGGCAAATTTAAACAACTGGA...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACCCTCTAGTTCTCATATaGCAGGCTATTCTGATTGTT +
Preference number: 3 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYPLVLI*QAILIV
Trigger: AACAATCAGAATAGCCTGCAATATGAGAACTAGAGG...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCCCTCTAGTTCTCATATaGCAGGCTATTCTGATTGTT +
Preference number: 3 (lower is better)
Translates to: VWTVSTITAYASVDSSSSPLVLI*QAILIV
Trigger: AACAATCAGAATAGCCTGCAATATGAGAACTAGAGG...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGACCTTTACGAGTGACTaGTTCCACTTCCAGGATTCC +
Preference number: 3 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKTFTSD*FHFQDS
Trigger: GGAATCCTGGAAGTGGAACAAGTCACTCGTAAAGGT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGGAGAAGCAGATCTCTTaGTGGTGCCTCATAAGTGAC +
Preference number: 3 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSREKQIS*WCLISD
Trigger: GTCACTTATGAGGCACCACAAAGAGATCTGCTTCTC...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp GTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTaGCAGTTCATCGAGCAAAGCCCTAGTTATTTTGGA +
Preference number: 3 (lower is better)
Translates to: VDSEHNYSLCQC*QFIEQSPSYFG
Trigger: TCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACTTGCTTATTAGGTTATaGTGGCCCACAGATCTTTTA +
Preference number: 3 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYLLIRL*WPTDLL
Trigger: TAAAAGATCTGTGGGCCACAATAACCTAATAAGCAA...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCACGCAGGGAGCTTTTCTaGATGGAATTTGGAGCAGGT +
Preference number: 3 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESRRELF*MEFGAG
Trigger: ACCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCG...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCAAGAAGAGCACTCATTaGCCACTTCCTCTTGGATCA +
Preference number: 3 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAKKSTH*PLPLGS
Trigger: TGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCTT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCCTTGTCCAGCTATCATaGGATCCTGAAGAAGAGCAC +
Preference number: 3 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSLVQLS*DPEEEH
Trigger: GTGCTCTTCTTCAGGATCCAATGATAGCTGGACAAG...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTTGTCCTCGCTGTCATTaGATTCCACAGGCGCAAGCA +
Preference number: 3 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFCPRCH*IPQAQA
Trigger: TGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACA...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTTGTGTTCTTCAGGGCTaGCCTCTTATTGCAGAACCA +
Preference number: 3 (lower is better)
Translates to: NMYISTASKLTALFCLLLCVLQG*PLIAEP
Trigger: TGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACA...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTATGTTTGTGCAGTTTTaGAGGTGGCGAAAGGGGCTC +
Preference number: 3 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFMFVQF*RWRKGL
Trigger: GAGCCCCTTTCGCCACCTCAAAAACTGCACAAACAT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGAGTGGCTTTTATTTTTaGTGGGTGGCAACCTTAACC +
Preference number: 3 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKSGFYF*WVATLT
Trigger: GGTTAAGGTTGCCACCCACAAAAAATAAAAGCCACT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp GCCATATCTATACAATGTGCATATACCTACAAATATTaGGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGGC +
Preference number: 3 (lower is better)
Translates to: AISIQCAYTYKY*ALVQRRETSKG
Trigger: GCCTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCACATTGTATAGATATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp CCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTaGTTATGGGTGGGCATCTCTTTAGGAGTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: PRVEFSFCEFCF*LWVGISLGVFF
Trigger: GAAGAAAACTCCTAAAGAGATGCCCACCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGAGGCTTGTATTCGCTTaGAACAGATCAAAGTTTTTG +
Preference number: 3 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLRLVFA*NRSKFL
Trigger: CAAAAACTTTGATCTGTTCAAAGCGAATACAAGCCT...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGCATTCTTTCAGCATCTaGACAGTAAACAGCAAACAG +
Preference number: 3 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLHSFSI*TVNSKQ
Trigger: CTGTTTGCTGTTTACTGTCAAGATGCTGAAAGAATG...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTAAAGCCCTAGTTATTTaGGAGTCTCTCCTGCATTTC +
Preference number: 3 (lower is better)
Translates to: NMYISTASKLTALFCLLLKALVI*ESLLHF
Trigger: GAAATGCAGGAGAGACTCCAAAATAACTAGGGCTTT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCCAGATAAAATCAGCTTaGGTTTCAATGTCAGAGCAA +
Preference number: 3 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAQIKSA*VSMSEQ
Trigger: TTGCTCTGACATTGAAACCAAAGCTGATTTTATCTG...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp AGGATTCCTTTTAGAGTTTCCTTGCTGGTAGTCTCTTaGTTGCTGCATGAATCATTGGAGGGGACAATTATA +
Preference number: 3 (lower is better)
Translates to: RIPFRVSLLVVS*LLHESLEGTII
Trigger: TATAATTGTCCCCTCCAATGATTCATGCAGCAATCAAGAGACTACCAGCAAGGAAACTCTAAAAGGAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAATTTTGTTGTTGTTGTaGTTGTGGAGTCCCAAGGGT +
Preference number: 3 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRILLLL*LWSPKG
Trigger: ACCCTTGGGACTCCACAACAACAACAACAACAAAAT...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCCATCCCAACATGTCCTaGCTTATTAGGTTATTGTGG +
Preference number: 3 (lower is better)
Translates to: QFSIARLSATFSHIYTMCHPNMS*LIRLLW
Trigger: CCACAATAACCTAATAAGCAAGGACATGTTGGGATG...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTAATCAGTTGGGCAACTaGAGATTGGGTTTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: NMYISTASKLTALFCLLLNQLGN*RLGFSF
Trigger: AAAAGAGAAACCCAATCTCAAGTTGCCCAACTGATT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp TTAGCCTGTTTCTTTGTGTGTGTGTTTATGGGTGTGTaGATGTCATGTGTGTATTTGACTGAAATCTTGAGA +
Preference number: 3 (lower is better)
Translates to: LACFFVCVFMGV*MSCVYLTEILR
Trigger: TCTCAAGATTTCAGTCAAATACACACATGACATGCACACACCCATAAACACACACACAAAGAAACAGGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR GCA 72 bp ATAGATCTCAGAACTGAGCAGGCCTTATGTAACCGCTaGCGGCATATATTTAAATATTTAGCATCCATCATA +
Preference number: 3 (lower is better)
Translates to: IDLRTEQALCNR*RHIFKYLASII
Trigger: TATGATGGATGCTAAATATTTAAATATATGCCGGCAGCGGTTACATAAGGCCTGCTCAGTTCTGAGATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp CTATACAATGTGCATATACCTACAAATATTGAGCTTTaGTCCAGCGTAGAGAAACGAGCAAAGGCATTTTAC +
Preference number: 3 (lower is better)
Translates to: LYNVHIPTNIEL*SSVEKRAKAFY
Trigger: GTAAAATGCCTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCACATTGTATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGATTTTGTTGTTGTTGTaGTTGTGGAGTCCCAAGGGT +
Preference number: 3 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTILLLL*LWSPKG
Trigger: ACCCTTGGGACTCCACAACAACAACAACAACAAAAT...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTAATCAGTTGGGCAACTaGAGATTGGGTTTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFNQLGN*RLGFSF
Trigger: AAAAGAGAAACCCAATCTCAAGTTGCCCAACTGATT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR TCA 72 bp CTCCATTTATATATCCCGAAGAGTAATTATTCCCCCTaGAAAAAGTCTGCCATCGCTATTGGAATGAAAGAA +
Preference number: 3 (lower is better)
Translates to: LHLYIPKSNYSP*KKSAIAIGMKE
Trigger: TTCTTTCATTCCAATAGCGATGGCAGACTTTTTTCAGGGGGAATAATTACTCTTCGGGATATATAAATGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR-3UTR CAA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTATTACAAAATTAGTTTaGGTCAGCTCTCCATGTACG +
Preference number: 3 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFITKLV*VSSPCT
Trigger: CGTACATGGAGAGCTGACCAAAACTAATTTTGTAAT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CCA 72 bp AATTTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTAT +
Preference number: 3 (lower is better)
Translates to: NFVVVVVVESQG*SLVSVNFASDY
Trigger: ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp TGCGAGGGCGCCTGTGGGGCTGGTTGCGGGTGCTGGTaGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CEGACGAGCGCW*VDGGGCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCGGCTGCAGCGGCTGCTaGTGGGACTGCGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RWRASASAIHRSSTGLIFGCSGC*WDCEGA
Trigger: GGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCC...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp AGGGCGCCTGTGGGGCTGGTTGCGGGTGCTGGTTGGTaGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RAPVGLVAGAGW*TGEAAAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATGGCGCCTGTTGCAGCTaGGATGTAGGAGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDGACCS*DVGAGG
Trigger: GCCGCCAGCTCCTACATCTCAGCTGCAACAGGCGCC...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCGGCTGCTTGACCCACTaGCGTCTGGGAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RWRASASAIHRSSTGLIFGCLTH*RLGGLV
Trigger: CACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCC...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCCCTTGGGAGGCTGCTTaGCCCACTGACGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RWRASASAIHRSSTGLIFPWEAA*PTDVWE
Trigger: CTCCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGG...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCCGGCTGCAGCTGCTaGCACCAGCCCTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAASGCSC*HQPLDV
Trigger: AACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGA...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCCTGCGAGGGCGCCTGTaGGGCTGGTTGCGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCLRGRL*GWLRVL
Trigger: CAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAG...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCGCTGTTGGCAGTGTaGGAACCAGTCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAASLLAV*EPVLAG
Trigger: GCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGA...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCTGCACTTGCAAGCCCTaGGTGCCGCTTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RWRASASAIHRSSTGLIFCTCKP*VPLAAW
Trigger: CCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTGCA...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCCAAGGGCCTGGGGTGTaGAGGAGGTGCGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCQGPGV*RRCAAC
Trigger: GCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTG...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGGGAGCTCATGGCTGCTaGAGCCGCTGCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: VLHTCSMAGLSLSHPPLKGAHGC*SRCSLT
Trigger: AGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCC...CTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCGACGTCTGGGAGGGTTaGTGGAGCTGCTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCDVWEG*WSCWPG
Trigger: GCCCGGCCAGCAGCTCCACCAACCCTCCCAGACGTC...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCCTTGGATGTTGGTaGGATTCGCTGTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAAALGCW*DSLLAV
Trigger: CACTGCCAACAGCGAATCTCACCAACATCCAAGGGC...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCGCCTCCGGCTGCAGCTaGTGCCACCAGCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSASGCS*CHQPLD
Trigger: ATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGC...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCGCTGGTTGCGGGTGCTaGTTGGTTGACGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTAGCGC*LVDGGG
Trigger: GCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGC...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGAGATGGTTGGTTCTaGTTCTGGGAGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAAGDGWF*FWEWEW
Trigger: CCACTCCCACTCCCAGAACCAGAACCAACCATCTCC...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCGGCTGCTTGACCCACTaGCGTCTGGGAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCGCLTH*RLGGLV
Trigger: CACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCC...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCCCGTTTGAGGATTGCTaGCTAACTGGCCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: RWRASASAIHRSSTGLIFPFEDC*LTGPRS
Trigger: TGAGCGTGGGCCAGTTAGTCAGCAATCCTCAAACGG...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCGGCTGCAGCGGCTGCTaGTGGGACTGCGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCGCSGC*WDCEGA
Trigger: GGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCC...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTGTGCCGTCAGAAGTaGCTGTGGCCCAACTGGAAA +
Preference number: 4 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDLCRQK*LWPNWK
Trigger: TTTCCAGTTGGGCCACAGCCACTTCTGACGGCACAG...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCGCTGCCACCAGCCCTTaGATGTTGGTGAGATTCGCT +
Preference number: 4 (lower is better)
Translates to: RWRASASAIHRSSTGLIFAATSP*MLVRFA
Trigger: AGCGAATCTCACCAACATCCAAGGGCTGGTGGCAGC...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTGGGTTGGAGATGGTTaGTTCTGGTTCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAAWVGDG*FWFWEW
Trigger: CCACTCCCAGAACCAGAACCAACCATCTCCAACCCA...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATTGCTGCTTGGCTCGATaGCCCTGGATTAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDCCLAR*PWIRHQ
Trigger: CTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCA...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTCTGCAGATGGCCGACTaGCTGTACGCGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVLQMAD*LYAGPS
Trigger: AGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAG...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSCIPAR*RASASA
Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCCAAAGGGACTGCCGTaGCCGGCTCGTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VLHTCSMAGLSLSHPPLKPKGLP*PARAVL
Trigger: TAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGG...CTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGGGCGCCTGTTGCAGCTaGGATGTAGGAGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVGACCS*DVGAGG
Trigger: GCCGCCAGCTCCTACATCTCAGCTGCAACAGGCGCC...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATGGCGCCTGTTGCAGCTaGGATGTAGGAGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYGACCS*DVGAGG
Trigger: GCCGCCAGCTCCTACATCTCAGCTGCAACAGGCGCC...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGGACTGGAGAGGGCATTaGCAAAGGCCTGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VLHTCSMAGLSLSHPPLKDWRGH*QRPVSL
Trigger: CAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTC...CTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTCTGAGTGCCGCTTGCTaGTTGGCTCGATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVLSAAC*LARWPW
Trigger: CCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAG...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTQVLHT*SMAGLS
Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTG...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTGGCCCAACTGGAAATaGGGGGTGGGTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCWPNWK*GVGLTG
Trigger: GCCAGTCAGACCCACCCCCCATTTCCAGTTGGGCCA...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCACTGTGGCGATGATCTaGCCCTGGGCGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: NSVRFCIPARWRASASAITVAMI*PWAFVR
Trigger: CCTCACAAACGCCCAGGGCCAGATCATCGCCACAGT...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCGACAGCGTGATGCCCTaGGTGTTGATCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSDSVMP*VLITGR
Trigger: CCTGCCCGTGATCAACACCCAGGGCATCACGCTGTC...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAATGLIF*ALLGVM
Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp CTGCTGCCTGCTCCGGGCACGGAGAAGCAGATCTCTTaGTGGTGCCTCATAAGTGACCCCGGTGACCAGTCT +
Preference number: 4 (lower is better)
Translates to: LLPAPGTEKQIS*WCLISDPGDQS
Trigger: AGACTGGTCACCGGGGTCACTTATGAGGCACCACAAAGAGATCTGCTTCTCCGTGCCCGGAGCAGGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp CCGGGCTTGATGGGTGACAGCGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGGTTCCCAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: PGLMGDSVMPWV*ITGRIWFPMTV
Trigger: CACAGTCATTGGGAACCAGATCCTGCCCGTGATCAACACCCAGGGCATCACGCTGTCACCCATCAAGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp GGAAGCCTGCCGGACGGGACTTTGAGACATGGATGCTaGGCTGTGAGCCAGGTGCAGAAGGTTGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GSLPDGTLRHGC*AVSQVQKVALG
Trigger: TCCCAAGGCAACCTTCTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCCGGGTGCTGGTTGGTTaGCGGGGGAGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCRVLVG*RGRLLL
Trigger: CAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCG...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATGAGGATTGGGTGGCGTaGGCGGTGAAGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYEDWVA*AVKAGH
Trigger: ATGGCCTGCCTTCACCGCTCACGCCACCCAATCCTC...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTGCCGGACGGGACTTTaGGACATGGATGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCCRTGL*DMDAWL
Trigger: CAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCA...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTGGCTGCAGCGGCTGCTaGTGGGACTGCGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPGCSGC*WDCEGA
Trigger: GGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCC...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCGGGCTCCAAAGGGACTaGCGTGGCCGGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCGLQRD*RGRLVL
Trigger: CAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCC...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCCTCCCTCCTGCTGCCTaGTCCGGGCACGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMALPPAA*SGHGEA
Trigger: TGCTTCTCCGTGCCCGGAGCAGGCAGCAGGAGGGAG...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCGTCAGAAGTGGCTGTaGCCCAACTGGAAATGGGGG +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSRQKWL*PNWKWG
Trigger: CCCCCATTTCCAGTTGGGCCACAGCCACTTCTGACG...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCCGTCAGAAGTGGCTGTaGCCCAACTGGAAATGGGGG +
Preference number: 4 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTRQKWL*PNWKWG
Trigger: CCCCCATTTCCAGTTGGGCCACAGCCACTTCTGACG...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTCTGAGAGGCGGGTGGTaGCTGCTGGGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISLRGGW*LLGWGG
Trigger: CCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAG...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATCTGAGATGTAGGAGCTaGCGGCTGCTGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYLRCRS*RLLRGG
Trigger: CCCGCCTCTCAGCAGCCGCCAGCTCCTACATCTCAG...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCTTGCTATGGAGCTCATaGCTGCTGCAGCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSLLWSS*LLQPLQ
Trigger: CTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAA...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCGCCCTTGGATGTTGGTaGGATTCGCTGTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTALGCW*DSLLAV
Trigger: CACTGCCAACAGCGAATCTCACCAACATCCAAGGGC...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCACAAGGGCCTGGGGTGTaGAGGAGGTGCGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSQGPGV*RRCAAC
Trigger: GCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTG...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR TCA 90 bp GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGCAAGGGCCTGGGGTGTaGAGGAGGTGCGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: AGYKRPGFSLAVRLLAIVQGPGV*RRCAAC
Trigger: GCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTG...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR TCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTCAAGGGCCTGGGGTGTaGAGGAGGTGCGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISQGPGV*RRCAAC
Trigger: GCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTG...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCSQSGH*GSQGPG
Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATAGCTTATGCCAGTGTTaGCAGTTCATCGAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDSLCQC*QFIEQS
Trigger: GCTTTGCTCGATGAACTGTCAACACTGGCATAAGCT...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCGGTGTTGGTCAGGAGTaGCTGGGTCTGATAATGCTG +
Preference number: 4 (lower is better)
Translates to: NSVRFCIPARWRASASAIGVGQE*LGLIML
Trigger: CAGCATTATCAGACCCAGGCACTCCTGACCAACACC...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTGGGGCTGGTTGCGGGTaGTGGTTGGTTGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLGAGCG*WLVDGG
Trigger: TCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCC...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGGGGCTGGTTGCGGGTaGTGGTTGGTTGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEGAGCG*WLVDGG
Trigger: TCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGGAGCTCATGGCTGCTaGAGCCGCTGCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMAGAHGC*SRCSLT
Trigger: AGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCC...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR GCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATCTTGCAAGCCCTGAGTaGCGCTTGCTGCTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYLASPE*RLLLGS
Trigger: CGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAG...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVQVLHT*SMAGLS
Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTG...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCGGTGAGATTCGCTGTTaGCAGTGTGAGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: NSVRFCIPARWRASASAIGEIRC*QCENQS
Trigger: GGACTGGTTCTCACACTGCCAACAGCGAATCTCACC...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCTGGAGCTGCTGGAGCTaGGAGTTCAGGGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSWSCWS*EFRDEV
Trigger: TACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCA...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTGCTGGTTGCGGGTGCTaGTTGGTTGACGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLAGCGC*LVDGGG
Trigger: GCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGC...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTCTGCGAGGGCGCCTGTaGGGCTGGTTGCGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPLRGRL*GWLRVL
Trigger: CAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAG...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGCTGAGAGGCGGGTGGTaGCTGCTGGGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLLRGGW*LLGWGG
Trigger: CCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAG...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTGGTTGGTTCTGGTTCTaGGAGTGGGAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVGWFWF*EWEWGW
Trigger: CCAACCCCACTCCCACTCCCAGAACCAGAACCAACC...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCCTGTGAGCTTGCTATaGAGCTCATGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSPVSLL*SSWLLQ
Trigger: CTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGG...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTGCGTTTGTGAGGAGCTaGGGGGTGATTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVAFVRS*GVIGCT
Trigger: AGTGCAGCCAATCACCCCCCAGCTCCTCACAAACGC...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp CCCCGAAGAGCTTGCTGGGAGTGTCCTCGCTGTCATTaGATTCCACAGGCGCAAGCAGGGGCTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRRACWECPRCH*IPQAQAGAHSA
Trigger: AGCTGAATGAGCCCCTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACACTCCCAGCAAGCTCTTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATAAGAGAGTTCATGCCTaGCCAATTACAGCTTGCATG +
Preference number: 4 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDKRVHA*PITACM
Trigger: CATGCAAGCTGTAATTGGTCAGGCATGAACTCTCTT...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSHFTPH*QQGLTD
Trigger: GTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATG...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTCGCTGTTGGCAGTGTaGGAACCAGTCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVSLLAV*EPVLAG
Trigger: GCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGA...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCGCAGCCGCTGCAGCCTaGCTTGCTAGTGGATTATTA +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCAAAAA*LASGLL
Trigger: TAATAATCCACTAGCAAGTCAGGCTGCAGCGGCTGC...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTGCACTTGCAAGCCCTaGGTGCCGCTTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PHLSTPHSFHSALTARAYCTCKP*VPLAAW
Trigger: CCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTGCA...GTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGCCGGGCTTGATGGGTaGCAGCGTGATGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSAGLDG*QRDALG
Trigger: ACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGC...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR TCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGGCTGCTTGACCCACTaGCGTCTGGGAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEGCLTH*RLGGLV
Trigger: CACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCTCTGGTGTGGACAGTaGGCACAATTACAGCTTATG +
Preference number: 4 (lower is better)
Translates to: VLHTCSMAGLSLSHPPLKLWCGQ*AQLQLM
Trigger: CATAAGCTGTAATTGTGCTCACTGTCCACACCAGAG...CTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCTATGGAGCTCATGGCTaGTGCAGCCGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACYGAHG*CSRCSL
Trigger: CAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATA...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCCTGAGTGCCGCTTGCTaGTTGGCTCGATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KPGRIQKARVQFGCQTASLSAAC*LARWPW
Trigger: CCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAG...GCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR GCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTCTCCCTCCTGCTGCCTaGTCCGGGCACGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISLPPAA*SGHGEA
Trigger: TGCTTCTCCGTGCCCGGAGCAGGCAGCAGGAGGGAG...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGGCTGGTTGCGGGTGCTaGTTGGTTGACGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AGYKRPGFSLAVRLLAIVAGCGC*LVDGGG
Trigger: GCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGC...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTGGGCGCCTGTGGGGCTaGTTGCGGGTGCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPGRLWG*LRVLVG
Trigger: ACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCC...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATTTCTGGTTCTGGGAGTaGGAGTGGGGTTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYFWFWE*EWGWCC
Trigger: GCAGCACCAACCCCACTCCCACTCCCAGAACCAGAA...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCTGGATTAGGCATCAGTaGAATGGTCCCGATAATCTG +
Preference number: 4 (lower is better)
Translates to: RWRASASAIHRSSTGLIFWIRHQ*NGPDNL
Trigger: CAGATTATCGGGACCATTCCACTGATGCCTAATCCA...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACAGCGTGATGCCCTaGGTGTTGATCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMADSVMP*VLITGR
Trigger: CCTGCCCGTGATCAACACCCAGGGCATCACGCTGTC...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGGTTGGTGGAGCTGCTaGCCGGGCTTGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEGWWSC*PGLMGD
Trigger: GTCACCCATCAAGCCCGGCCAGCAGCTCCACCAACC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTGTCTGGGAGGGTTGGTaGAGCTGCTGGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVVWEGW*SCWPGL
Trigger: CAAGCCCGGCCAGCAGCTCCACCAACCCTCCCAGAC...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCCIPAR*RASASA
Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RWRASASAIHRSSTGLIFVFFSK*ALRISR
Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATTCACTAGGATCTGAGTaGAAAAGACACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDSLGSE*KRHCFS
Trigger: GGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGA...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTGCACTTGCAAGCCCTaGGTGCCGCTTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCCTCKP*VPLAAW
Trigger: CCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTGCA...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTGCCGGGCTTGATGGGTaGCAGCGTGATGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPAGLDG*QRDALG
Trigger: ACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGC...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCCCTTGGGAGGCTGCTTaGCCCACTGACGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFPWEAA*PTDVWE
Trigger: CTCCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGG...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGATGGATGCTTGGCTGTaGGCCAGGTGCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVMDAWL*ARCRRL
Trigger: CAACCTTCTGCACCTGGCTCACAGCCAAGCATCCAT...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAAGAGCCTGTCCCACCTaGGTCTGGGTCAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSRACPT*VWVRPR
Trigger: CCTTGGCCTGACCCAGACTCAGGTGGGACAGGCTCT...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR TCA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTATTGCAGGCTATTCTaGTTGTTAGATAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAAYCRLF*LLDKPL
Trigger: AAGGGGCTTATCTAACAATCAGAATAGCCTGCAATA...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCAACAGCAAGCAAATTaGCAGCTCTCTTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NSVRFCIPARWRASASAIQQQAN*QLSFAC
Trigger: GCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTG...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGTCCGGCTGCAGCTGCTaGCACCAGCCCTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVESGCSC*HQPLDV
Trigger: AACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGA...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCCGGCTGCAGCTGCTaGCACCAGCCCTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCSGCSC*HQPLDV
Trigger: AACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGA...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCGCCTCCGGCTGCAGCTaGTGCCACCAGCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: VWTVSTITAYASVDSSSSASGCS*CHQPLD
Trigger: ATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGC...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCACATAATGCCTCCGGCTaGAGCTGCTGCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSHNASG*SCCHQP
Trigger: GGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATG...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR GCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATGTGGGCTGCAGCGGCTaGTGCTGGGACTGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHVGCSG*CWDCEG
Trigger: GCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCCCAC...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCCTGAGTGCCGCTTGCTaGTTGGCTCGATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFLSAAC*LARWPW
Trigger: CCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAG...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATATCCACCTCACCCGCTaGCGTTTGAGGATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYIHLTR*RLRIAD
Trigger: GTCAGCAATCCTCAAACGGCAGCGGGTGAGGTGGAT...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CACCAGCCCTTGGATGTTGGTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCCATCCACCTCACCCGCTaGCGTTTGAGGATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: HQPLDVGEIRCWQCENQSIHLTR*RLRIAD
Trigger: GTCAGCAATCCTCAAACGGCAGCGGGTGAGGTGGAT...GGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAACATCCAAGGGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGAGGAGGTGCGCCGCTTaGGCTTTTTGGATGGTTCAC +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVRRCAA*AFWMVH
Trigger: GTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCT...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCGCACACGATCCAGGATaGCCTCCCGTCAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSAHDPG*PPVKKK
Trigger: TTTCTTTTTGACGGGAGGGCATCCTGGATCGTGTGC...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTCTCCCTCCTGCTGCCTaGTCCGGGCACGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPLPPAA*SGHGEA
Trigger: TGCTTCTCCGTGCCCGGAGCAGGCAGCAGGAGGGAG...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCGGGGGTGGGTCTGACTaGCCTGGTGTTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFGGGSD*PGVGQE
Trigger: CTCCTGACCAACACCAGGCCAGTCAGACCCACCCCC...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCGTTGCGGGTGCTGGTTaGTTGACGGGGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFVAGAG*LTGEAA
Trigger: AGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAAC...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCTTGGCTCGATGGCCCTaGATTAGGCATCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSLARWP*IRHQWN
Trigger: ATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAA...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATTGCTGCTTGGCTCGATaGCCCTGGATTAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYCCLAR*PWIRHQ
Trigger: CTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCA...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGGCGATGATCTGGCCCTaGGCGTTTGTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQAMIWP*AFVRSW
Trigger: CCAGCTCCTCACAAACGCCCAGGGCCAGATCATCGC...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCCTGCAGATGGCCGACTaGCTGTACGCGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VWTVSTITAYASVDSSSSLQMAD*LYAGPS
Trigger: AGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAG...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCCCAAAGGGACTGCCGTaGCCGGCTCGTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMAPKGLP*PARAVL
Trigger: TAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGG...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCGTTTGAGGATCTGCTaGCCGGGCTTGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACRLRIC*PGLMGD
Trigger: GTCACCCATCAAGCCCGGCCAGCAGATCCTCAAACG...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416452.1
CDS-3UTR CCA 90 bp TGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGTTCTCCCCACTTCTGTaGCCTTCCAGCAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: CGRKKWLLRMVCLQMADWFSPLL*PSSRPQ
Trigger: CTGGGGTCTGCTGGAAGGCCACAGAAGTGGGGAGAA...CCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR TCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTCCTTGGGAGGCTGCTTaGCCCACTGACGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPPWEAA*PTDVWE
Trigger: CTCCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGG...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATACAGCAGAAGCTAACTaGTGTGCCGTCAGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYTAEAN*CAVRSG
Trigger: GCCACTTCTGACGGCACAGCAGTTAGCTTCTGCTGT...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGGCTGCAGCGGCTGCTaGTGGGACTGCGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNGCSGC*WDCEGA
Trigger: GGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCTATGGAGCTCATGGCTaGTGCAGCCGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFYGAHG*CSRCSL
Trigger: CAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATA...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGCTGAGTGCCGCTTGCTaGTTGGCTCGATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLLSAAC*LARWPW
Trigger: CCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAG...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AGYKRPGFSLAVRLLAIVQVLHT*SMAGLS
Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTG...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR GCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCATTTCGGTCATTTCCTaGCCAGAAGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTISVIS*PEGCVF
Trigger: GAACACACACCCTTCTGGGCAGGAAATGACCGAAAT...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTGCCGTGGCCGGCTCGTaGTGTTTTAAGCGTTTAATT +
Preference number: 4 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVAVAGS*CFKRLI
Trigger: AATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGGGGCTCCAAAGGGACTaGCGTGGCCGGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLGLQRD*RGRLVL
Trigger: CAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCC...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCGGGGGTGGGTCTGACTaGCCTGGTGTTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VWTVSTITAYASVDSSSSGGGSD*PGVGQE
Trigger: CTCCTGACCAACACCAGGCCAGTCAGACCCACCCCC...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGAACCAGTCCTTGCTaGCCTCCTAGCTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFRTSPC*PPSCPA
Trigger: GGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCT...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCTGCGAGGGCGCCTGTaGGGCTGGTTGCGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFLRGRL*GWLRVL
Trigger: CAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATCTGCGAGGGCGCCTGTaGGGCTGGTTGCGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDLRGRL*GWLRVL
Trigger: CAGCACCCGCAACCAGCCCCACAGGCGCCCTCGCAG...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCTGAGAGGCGGGTGGTaGCTGCTGGGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFLRGGW*LLGWGG
Trigger: CCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTCTGAGATGTAGGAGCTaGCGGCTGCTGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPLRCRS*RLLRGG
Trigger: CCCGCCTCTCAGCAGCCGCCAGCTCCTACATCTCAG...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGGTGCCGCTTGCTGCTTaGCTCGATGGCCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQVPLAA*LDGPGL
Trigger: TAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCAC...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp TGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGATCACGGGCAGGATCTaGTTCCCAATGACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: CGRKKWLLRMVCLQMADWITGRI*FPMTVA
Trigger: CGCCACAGTCATTGGGAACCAGATCCTGCCCGTGAT...CCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATGACGTCTGGGAGGGTTaGTGGAGCTGCTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHDVWEG*WSCWPG
Trigger: GCCCGGCCAGCAGCTCCACCAACCCTCCCAGACGTC...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTATGGTGTGTCTGCAGATaGCCGACTGGCTGTACGCGG +
Preference number: 4 (lower is better)
Translates to: SNLAGYKRPGFSLAVRLLWCVCR*PTGCTR
Trigger: CCGCGTACAGCCAGTCGGCCATCTGCAGACACACCA...TAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCCAGCTTTTCAAACCTaGCAGGATACAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSPAFQT*QDTKGQ
Trigger: CTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCAAGCAGATCTCTTTGTaGTGCCTCATAAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSKQISL*CLISDP
Trigger: GGGGTCACTTATGAGGCACCACAAAGAGATCTGCTT...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCAAGAGAGTTCATGCCTaGCCAATTACAGCTTGCATG +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCKRVHA*PITACM
Trigger: CATGCAAGCTGTAATTGGTCAGGCATGAACTCTCTT...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTGTCCTCGCTGTCATTTaGTTCCACAGGCGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLVLAVI*FHRRKQ
Trigger: CTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGAC...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCGGGTGCTGGTTGGTTaGCGGGGGAGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFRVLVG*RGRLLL
Trigger: CAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGGCGCCTGTTGCAGCTaGGATGTAGGAGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGGACCS*DVGAGG
Trigger: GCCGCCAGCTCCTACATCTCAGCTGCAACAGGCGCC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGATTGCCAAAGGCCTGTaGGCTTGCTATGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVIAKGL*ACYGAH
Trigger: ATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAAT...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGTCACCCGCTGCCGTTTaGGGATCTGCTGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLSPAAV*GSAGRA
Trigger: AGCCCGGCCAGCAGATCCTCAAACGGCAGCGGGTGA...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416452.1
CDS-3UTR TCA 90 bp TGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGTCAGCACTTAGTACCTaGAGGGGTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CGRKKWLLRMVCLQMADWSALST*RGAVLP
Trigger: AGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTGA...CCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR GCA 90 bp TTTGGCAAATTCTCGGATCTCCTCCAGATTAACCCCATCCACCTCACCCGCTGCGGTGTTGGTCAGGAGTaGCTGGGTCTGATAATGCTG +
Preference number: 4 (lower is better)
Translates to: FGKFSDLLQINPIHLTRCGVGQE*LGLIML
Trigger: CAGCATTATCAGACCCAGGCACTCCTGACCAACACC...GCAGCGGGTGAGGTGGATGGGGTTAATCTGGAGGAGATCCGAGAATTTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGCCTCCGGCTGCAGCTaGTGCCACCAGCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGASGCS*CHQPLD
Trigger: ATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGTGGGCTGCAGCGGCTaGTGCTGGGACTGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFVGCSG*CWDCEG
Trigger: GCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCCCAC...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPQVLHT*SMAGLS
Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTG...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCAACTCGGTCAGGTTCTaGATACCTGCTCGATGGCGG +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCNSVRF*IPARWR
Trigger: CCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGAGGAGGTGCGCCGCTTaGGCTTTTTGGATGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQRRCAA*AFWMVH
Trigger: GTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCT...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR GCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGGGGCTCCAAAGGGACTaGCGTGGCCGGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRGLQRD*RGRLVL
Trigger: CAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCC...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCGGTGAGATTCGCTGTTaGCAGTGTGAGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACGEIRC*QCENQS
Trigger: GGACTGGTTCTCACACTGCCAACAGCGAATCTCACC...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATGGGCGCCTGTGGGGCTaGTTGCGGGTGCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDGRLWG*LRVLVG
Trigger: ACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCC...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGCAGCGGCTGCTGCTaGGACTGCGAGGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFCSGCC*DCEGAC
Trigger: ACAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCA...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTGGAGATGGTTGGTTCTaGTTCTGGGAGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLGDGWF*FWEWEW
Trigger: CCACTCCCACTCCCAGAACCAGAACCAACCATCTCC...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCGGAGATGGTTGGTTCTaGTTCTGGGAGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KPGRIQKARVQFGCQTASGDGWF*FWEWEW
Trigger: CCACTCCCACTCCCAGAACCAGAACCAACCATCTCC...GCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCGCGATGATCTGGCCCTaGGCGTTTGTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VWTVSTITAYASVDSSSSAMIWP*AFVRSW
Trigger: CCAGCTCCTCACAAACGCCCAGGGCCAGATCATCGC...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGGACAGCGTGATGCCCTaGGTGTTGATCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLDSVMP*VLITGR
Trigger: CCTGCCCGTGATCAACACCCAGGGCATCACGCTGTC...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATGACGTCTGGGAGGGTTaGTGGAGCTGCTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDDVWEG*WSCWPG
Trigger: GCCCGGCCAGCAGCTCCACCAACCCTCCCAGACGTC...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSCGRKK*LLRMVC
Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACA...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGCCGTCTGCCTGTACCTaGGTGAAAACACCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEPSACT*VKTPVA
Trigger: TGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGG...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp AGGGGCTCATTCAGCTCGCTGTCTGAAGTAGCAGCCTaGTCCTCACCTCTCAACTCCGCATTCATTTCACTC +
Preference number: 4 (lower is better)
Translates to: RGSFSSLSEVAA*SSPLNSAFISL
Trigger: GAGTGAAATGAATGCGGAGTTGAGAGGTGAGGACAAGGCTGCTACTTCAGACAGCGAGCTGAATGAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLHFTPH*QQGLTD
Trigger: GTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATG...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCGGGTGCTGGTTGGTTaGCGGGGGAGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNRVLVG*RGRLLL
Trigger: CAGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCATTGCCAAAGGCCTGTaGGCTTGCTATGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACIAKGL*ACYGAH
Trigger: ATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAAT...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGCCGGGCTTGATGGGTaGCAGCGTGATGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASAGLDG*QRDALG
Trigger: ACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCGCCGGGCTTGATGGGTaGCAGCGTGATGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFAGLDG*QRDALG
Trigger: ACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGC...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACTGCCGGACGGGACTTTaGGACATGGATGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYCRTGL*DMDAWL
Trigger: CAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCA...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATAGAGCCTGTCCCACCTaGGTCTGGGTCAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHRACPT*VWVRPR
Trigger: CCTTGGCCTGACCCAGACTCAGGTGGGACAGGCTCT...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTCAAGGGCCTGGGGTGTaGAGGAGGTGCGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFQGPGV*RRCAAC
Trigger: GCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTG...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTATCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNLAGYKRPGFSLAVRLLSQSGH*GSQGPG
Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...TAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTGTGAATTTTGCTTCTaGTTATGGGTGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCCEFCF*LWVGIS
Trigger: AGAGATGCCCACCCATAATCAGAAGCAAAATTCACA...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGCGTGTCCTGCTGCGCTaGGAGATAGCAATCCATCAT +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVERVLLR*EIAIHH
Trigger: ATGATGGATTGCTATCTCTCAGCGCAGCAGGACACG...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGGCAAATTCTCGGATCTCCTCCAGATTAACCCCATCCACCTCACCCGCTGCTGTTTGTGCAGTTTTTaGGGTGGCGAAAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FGKFSDLLQINPIHLTRCCLCSF*GGERGS
Trigger: AGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACA...GCAGCGGGTGAGGTGGATGGGGTTAATCTGGAGGAGATCCGAGAATTTGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGGGAGCTCATGGCTGCTaGAGCCGCTGCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLGAHGC*SRCSLT
Trigger: AGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCC...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTGACTGGAGAGGGCATTaGCAAAGGCCTGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVDWRGH*QRPVSL
Trigger: CAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTC...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAAACTCGGTCAGGTTCTaGATACCTGCTCGATGGCGG +
Preference number: 4 (lower is better)
Translates to: SNLAGYKRPGFSLAVRLLNSVRF*IPARWR
Trigger: CCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT...TAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR GCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCTCCAAAGGGACTaGCGTGGCCGGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYGLQRD*RGRLVL
Trigger: CAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGGACGAACGATCGCGTTaGAATGCCATGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVDERSR*NAMFLT
Trigger: AGTCAGAAACATGGCATTGCAACGCGATCGTTCGTC...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGCAGCTCTCTTTTGCCTaGTCCTTTAATGGAACACCG +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVQLSFA*SFNGTP
Trigger: CGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTG...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATGGGGGTGGGTCTGACTaGCCTGGTGTTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHGGGSD*PGVGQE
Trigger: CTCCTGACCAACACCAGGCCAGTCAGACCCACCCCC...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGGGCGCCTGTGGGGCTaGTTGCGGGTGCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFGRLWG*LRVLVG
Trigger: ACCAACCAGCACCCGCAACCAGCCCCACAGGCGCCC...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTGCAGCGGCTGCTGCTaGGACTGCGAGGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNCSGCC*DCEGAC
Trigger: ACAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCA...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCAGCGGCTGCTGCTaGGACTGCGAGGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFCSGCC*DCEGAC
Trigger: ACAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCACTGAGAGGCGGGTGGTaGCTGCTGGGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESLRGGW*LLGWGG
Trigger: CCCACCCCACCCCAGCAGCCACCACCCGCCTCTCAG...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCTGAGATGTAGGAGCTaGCGGCTGCTGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLRCRS*RLLRGG
Trigger: CCCGCCTCTCAGCAGCCGCCAGCTCCTACATCTCAG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACGGTTGGTTCTGGTTCTaGGAGTGGGAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYGWFWF*EWEWGW
Trigger: CCAACCCCACTCCCACTCCCAGAACCAGAACCAACC...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGGAGCTCTGCTGGGTTaGAGATGGTTGGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEGALLG*RWLVLV
Trigger: AACCAGAACCAACCATCTCCAACCCAGCAGAGCTCC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATGTCTGGGAGGGTTGGTaGAGCTGCTGGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDVWEGW*SCWPGL
Trigger: CAAGCCCGGCCAGCAGCTCCACCAACCCTCCCAGAC...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGACGTCTGGGAGGGTTaGTGGAGCTGCTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFDVWEG*WSCWPG
Trigger: GCCCGGCCAGCAGCTCCACCAACCCTCCCAGACGTC...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCCTGCAGATGGCCGACTaGCTGTACGCGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNALQMAD*LYAGPS
Trigger: AGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAG...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATGTGAGCCTCACAGAATaGCTTCAACAATGGTACCCA +
Preference number: 4 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYVSLTE*LQQWYP
Trigger: TGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCAC...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTCCGTCTGCCTGTACCTaGGTGAAAACACCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVPSACT*VKTPVA
Trigger: TGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGG...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTATCACTGCACATGAATaGTGTTACGACTGTCGGATG +
Preference number: 4 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVITAHE*CYDCRM
Trigger: CATCCGACAGTCGTAACACCATTCATGTGCAGTGAT...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTG +
Preference number: 4 (lower is better)
Translates to: PHLSTPHSFHSALTARAYTARAY*LVQLSL
Trigger: CAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGT...GTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTGCAGCCGCTGCAGCCTaGCTTGCTAGTGGATTATTA +
Preference number: 4 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISAAAAA*LASGLL
Trigger: TAATAATCCACTAGCAAGTCAGGCTGCAGCGGCTGC...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCCTTGGGAGGCTGCTTaGCCCACTGACGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFPWEAA*PTDVWE
Trigger: CTCCCAGACGTCAGTGGGTCAAGCAGCCTCCCAAGG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATAGAGCCTGTCCCACCTaGGTCTGGGTCAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDRACPT*VWVRPR
Trigger: CCTTGGCCTGACCCAGACTCAGGTGGGACAGGCTCT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCAGAGCCTGTCCCACCTaGGTCTGGGTCAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFRACPT*VWVRPR
Trigger: CCTTGGCCTGACCCAGACTCAGGTGGGACAGGCTCT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCATAATGCCTCCGGCTaGAGCTGCTGCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFHNASG*SCCHQP
Trigger: GGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGCTGGTTGCGGGTaGTGGTTGGTTGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYGAGCG*WLVDGG
Trigger: TCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTGTGGGCTGCAGCGGCTaGTGCTGGGACTGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFVGCSG*CWDCEG
Trigger: GCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCCCAC...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAGTGGGCTGCAGCGGCTaGTGCTGGGACTGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRVGCSG*CWDCEG
Trigger: GCCCTCGCAGTCCCAGCAGCAGCCGCTGCAGCCCAC...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCTGAGTGCCGCTTGCTaGTTGGCTCGATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFLSAAC*LARWPW
Trigger: CCAGGGCCATCGAGCCAAGCAGCAAGCGGCACTCAG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCTTGCAAGCCCTGAGTaGCGCTTGCTGCTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLLASPE*RLLLGS
Trigger: CGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAG...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCTTGCAAGCCCTGAGTaGCGCTTGCTGCTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLASPE*RLLLGS
Trigger: CGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGACGATCGCGTTGCAATaGCATGTTTCTGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVTIALQ*HVSDFG
Trigger: ACCAAAGTCAGAAACATGGCATTGCAACGCGATCGT...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGGCAAATTCTCGGATCTCCTCCAGATTAACCCCATCCACCTCACCCGCTGCTGCCCGCCACCTTTCTaGTCCATTTATATATCCCGA +
Preference number: 4 (lower is better)
Translates to: FGKFSDLLQINPIHLTRCCPPPF*SIYISR
Trigger: TCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCA...GCAGCGGGTGAGGTGGATGGGGTTAATCTGGAGGAGATCCGAGAATTTGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGAGAACCAGTCCTTGCTaGCCTCCTAGCTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGRTSPC*PPSCPA
Trigger: GGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCT...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATAGAACCAGTCCTTGCTaGCCTCCTAGCTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHRTSPC*PPSCPA
Trigger: GGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCT...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGCTGGTTGCGGGTGCTaGTTGGTTGACGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYAGCGC*LVDGGG
Trigger: GCCTCCCCCGTCAACCAACCAGCACCCGCAACCAGC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGTGGGTTGGAGATGGTTaGTTCTGGTTCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AGYKRPGFSLAVRLLAIVWVGDG*FWFWEW
Trigger: CCACTCCCAGAACCAGAACCAACCATCTCCAACCCA...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGAGGCAGGCCATGTCCTaGAGACTGACTAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGYKRPGFSLAVRLLAIVRQAMS*RLTRFL
Trigger: CAGAAACCTAGTCAGTCTCCAGGACATGGCCTGCCT...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGTTGGCTCGATGGCCCTaGATTAGGCATCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVELARWP*IRHQWN
Trigger: ATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAA...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATGCGATGATCTGGCCCTaGGCGTTTGTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHAMIWP*AFVRSW
Trigger: CCAGCTCCTCACAAACGCCCAGGGCCAGATCATCGC...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTATCACGGGCAGGATCTaGTTCCCAATGACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPITGRI*FPMTVA
Trigger: CGCCACAGTCATTGGGAACCAGATCCTGCCCGTGAT...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGGTTGGTGGAGCTGCTaGCCGGGCTTGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASGWWSC*PGLMGD
Trigger: GTCACCCATCAAGCCCGGCCAGCAGCTCCACCAACC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGTCTGGGAGGGTTGGTaGAGCTGCTGGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYVWEGW*SCWPGL
Trigger: CAAGCCCGGCCAGCAGCTCCACCAACCCTCCCAGAC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCTGCAGATGGCCGACTaGCTGTACGCGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYLQMAD*LYAGPS
Trigger: AGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CACCAGCCCTTGGATGTTGGTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCCGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: HQPLDVGEIRCWQCENQSAIVFS*ASCGRK
Trigger: TTTCCTACCACAGGAAGCCCAAGAGAACACTATAGC...GGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAACATCCAAGGGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDCIPAR*RASASA
Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGAGTCCTTCCTCCAGGTaGCAGGCTTGTATTCGCTTT +
Preference number: 4 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQSPSSR*QACIRF
Trigger: AAAGCGAATACAAGCCTGCCACCTGGAGGAAGGACT...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGAATGGCTTCAACAATaGTACCCACCCCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSEWLQQ*YPPHGW
Trigger: CCACCCATGGGGTGGGTACCATTGTTGAAGCCATTC...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp AAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCGTGCAGTTTTTGAGGTaGCGAAAGGGGCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: KPGRIQKARVQFGCQTASVQFLR*RKGLCD
Trigger: ATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCAC...GCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTTCAGTTTGGCTTCTTaGTCACAAGTCTATCATGTC +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCFSLAS*SQVYHV
Trigger: GACATGATAGACTTGTGACCAAGAAGCCAAACTGAA...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGAGGATTGGGTGGCGTaGGCGGTGAAGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFEDWVA*AVKAGH
Trigger: ATGGCCTGCCTTCACCGCTCACGCCACCCAATCCTC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCGAGGATTGGGTGGCGTaGGCGGTGAAGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSEDWVA*AVKAGH
Trigger: ATGGCCTGCCTTCACCGCTCACGCCACCCAATCCTC...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGAGGATTGGGTGGCGTaGGCGGTGAAGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNEDWVA*AVKAGH
Trigger: ATGGCCTGCCTTCACCGCTCACGCCACCCAATCCTC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTGCCGGGCTTGATGGGTaGCAGCGTGATGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTAGLDG*QRDALG
Trigger: ACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGC...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGCTGCTTGACCCACTaGCGTCTGGGAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYGCLTH*RLGGLV
Trigger: CACCAACCCTCCCAGACGTCAGTGGGTCAAGCAGCC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCGGCTTGTATTCGCTTTaGACAGATCAAAGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCGLYSL*TDQSFC
Trigger: ACAAAAACTTTGATCTGTTCAAAGCGAATACAAGCC...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTACGTGGCCAACAGACTaGGAAAAATCCCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISTWPTD*EKSQAL
Trigger: CAGAGCTTGGGATTTTTCTCAGTCTGTTGGCCACGT...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGGGTGTTGGTCAGGAGTaGCTGGGTCTGATAATGCTG +
Preference number: 4 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLGVGQE*LGLIML
Trigger: CAGCATTATCAGACCCAGGCACTCCTGACCAACACC...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTCATAATGCCTCCGGCTaGAGCTGCTGCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFHNASG*SCCHQP
Trigger: GGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATG...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGGGGCTGGTTGCGGGTaGTGGTTGGTTGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESGAGCG*WLVDGG
Trigger: TCCCCCGTCAACCAACCAGCACCCGCAACCAGCCCC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGGAGCTCATGGCTGCTaGAGCCGCTGCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNGAHGC*SRCSLT
Trigger: AGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCGGAGCTCATGGCTGCTaGAGCCGCTGCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSGAHGC*SRCSLT
Trigger: AGTCAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCC...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTTATGGAGCTCATGGCTaGTGCAGCCGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASYGAHG*CSRCSL
Trigger: CAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATA...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATTTCGGTCATTTCCTaGCCAGAAGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQISVIS*PEGCVF
Trigger: GAACACACACCCTTCTGGGCAGGAAATGACCGAAAT...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR GCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTGGGCTCCAAAGGGACTaGCGTGGCCGGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFGLQRD*RGRLVL
Trigger: CAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCC...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCGACGAACGATCGCGTTaGAATGCCATGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCDERSR*NAMFLT
Trigger: AGTCAGAAACATGGCATTGCAACGCGATCGTTCGTC...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGGTGGGTCTGACTaGCCTGGTGTTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYGGGSD*PGVGQE
Trigger: CTCCTGACCAACACCAGGCCAGTCAGACCCACCCCC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGGCCCAACTGGAAATaGGGGGTGGGTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFWPNWK*GVGLTG
Trigger: GCCAGTCAGACCCACCCCCCATTTCCAGTTGGGCCA...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCGTCAGAAGTGGCTGTaGCCCAACTGGAAATGGGGG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGRQKWL*PNWKWG
Trigger: CCCCCATTTCCAGTTGGGCCACAGCCACTTCTGACG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGTTGCGGGTGCTGGTTaGTTGACGGGGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFVAGAG*LTGEAA
Trigger: AGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAAC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGTTGCGGGTGCTGGTTaGTTGACGGGGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYVAGAG*LTGEAA
Trigger: AGCAGCCTCCCCCGTCAACCAACCAGCACCCGCAAC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTTGCAGCGGCTGCTGCTaGGACTGCGAGGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFCSGCC*DCEGAC
Trigger: ACAGGCGCCCTCGCAGTCCCAGCAGCAGCCGCTGCA...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTTCTGGTTCTGGGAGTaGGAGTGGGGTTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGFWFWE*EWGWCC
Trigger: GCAGCACCAACCCCACTCCCACTCCCAGAACCAGAA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCAGGCAGGCCATGTCCTaGAGACTGACTAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VWTVSTITAYASVDSSSSRQAMS*RLTRFL
Trigger: CAGAAACCTAGTCAGTCTCCAGGACATGGCCTGCCT...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTTGCTATGGAGCTCATaGCTGCTGCAGCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLLWSS*LLQPLQ
Trigger: CTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATGTGCCGCTTGCTGCTTaGCTCGATGGCCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHVPLAA*LDGPGL
Trigger: TAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCAC...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGGCGTTTGTGAGGAGCTaGGGGGTGATTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLAFVRS*GVIGCT
Trigger: AGTGCAGCCAATCACCCCCCAGCTCCTCACAAACGC...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGCGATGATCTGGCCCTaGGCGTTTGTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASAMIWP*AFVRSW
Trigger: CCAGCTCCTCACAAACGCCCAGGGCCAGATCATCGC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGGCGATGATCTGGCCCTaGGCGTTTGTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRAMIWP*AFVRSW
Trigger: CCAGCTCCTCACAAACGCCCAGGGCCAGATCATCGC...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTCTGCAGATGGCCGACTaGCTGTACGCGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLLQMAD*LYAGPS
Trigger: AGAGGGCCCCGCGTACAGCCAGTCGGCCATCTGCAG...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PHLSTPHSFHSALTARAYCGRKK*LLRMVC
Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACA...GTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACAIVFS*ASCGRK
Trigger: TTTCCTACCACAGGAAGCCCAAGAGAACACTATAGC...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSTGLIF*ALLGVM
Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFCIPAR*RASASA
Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCCAAAGGGACTGCCGTaGCCGGCTCGTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGPKGLP*PARAVL
Trigger: TAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMAVESQG*SLVSVN
Trigger: ATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCCACACACCTTCAGTGTaGTGTATTCCTTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTHTPSV*CIPCLK
Trigger: TTTTAAACAAGGAATACACCACACTGAAGGTGTGTG...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTTCTCCCCACTTCTGTaGCCTTCCAGCAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGFSPLL*PSSRPQ
Trigger: CTGGGGTCTGCTGGAAGGCCACAGAAGTGGGGAGAA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCCCAAGCTCTGGTGTaGACAGTGAGCACAATTACA +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCSQALV*TVSTIT
Trigger: TGTAATTGTGCTCACTGTCCACACCAGAGCTTGGGA...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCGTGCAGTTTTTGAGGTaGCGAAAGGGGCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFVQFLR*RKGLCD
Trigger: ATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCAC...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCAAGCAGATCTCTTTGTaGTGCCTCATAAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCKQISL*CLISDP
Trigger: GGGGTCACTTATGAGGCACCACAAAGAGATCTGCTT...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTCGCTGTTGGCAGTGTaGGAACCAGTCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFSLLAV*EPVLAG
Trigger: GCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGA...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTATTGCCAAAGGCCTGTaGGCTTGCTATGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPIAKGL*ACYGAH
Trigger: ATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAAT...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCACTTGCAAGCCCTaGGTGCCGCTTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFCTCKP*VPLAAW
Trigger: CCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTGCA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAAGAGCCTGTCCCACCTaGGTCTGGGTCAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESRACPT*VWVRPR
Trigger: CCTTGGCCTGACCCAGACTCAGGTGGGACAGGCTCT...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGGCAAATTCTCGGATCTCCTCCAGATTAACCCCATCCACCTCACCCGCTGCTGTGAATTTTGCTTCTaGTTATGGGTGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: FGKFSDLLQINPIHLTRCCEFCF*LWVGIS
Trigger: AGAGATGCCCACCCATAATCAGAAGCAAAATTCACA...GCAGCGGGTGAGGTGGATGGGGTTAATCTGGAGGAGATCCGAGAATTTGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTTGTTTGTGCAGTTTTTaGGGTGGCGAAAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPCLCSF*GGERGS
Trigger: AGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACA...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGGTACAAGTAGAGTGCTaGGGTAAAACATTGATGAAC +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVVQVEC*GKTLMN
Trigger: GTTCATCAATGTTTTACCTCAGCACTCTACTTGTAC...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTACCCAAGAGAGTTCATaGCTGACCAATTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLTQESS*LTNYSL
Trigger: CAAGCTGTAATTGGTCAGGCATGAACTCTCTTGGGT...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGACCCAAGAGAGTTCATaGCTGACCAATTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: NSEPHRMASTMVPTPWVETQESS*LTNYSL
Trigger: CAAGCTGTAATTGGTCAGGCATGAACTCTCTTGGGT...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCAGAAGAGCACTCATTTaGCACTTCCTCTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMARRALI*HFLLDH
Trigger: ATGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCT...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR GCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATTCCGGCTGCAGCTGCTaGCACCAGCCCTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYSGCSC*HQPLDV
Trigger: AACATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGA...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGCCACTTCCTCTTGGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTGCCTCCGGCTGCAGCTaGTGCCACCAGCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: FATSSWIIIRTFFQHLDSASGCS*CHQPLD
Trigger: ATCCAAGGGCTGGTGGCAGCAGCTGCAGCCGGAGGC...ACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTATGGAGCTCATGGCTaGTGCAGCCGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNYGAHG*CSRCSL
Trigger: CAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATA...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCTTGCAAGCCCTGAGTaGCGCTTGCTGCTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYLASPE*RLLLGS
Trigger: CGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCTTGCAAGCCCTGAGTaGCGCTTGCTGCTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNLASPE*RLLLGS
Trigger: CGAGCCAAGCAGCAAGCGGCACTCAGGGCTTGCAAG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGCCAGGTGCAGAAGGTTaGCTTGGGAGGCTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLPGAEG*LGRLLD
Trigger: GTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGG...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTCAGGTTCTGCATACCTaGTCGATGGCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFQVLHT*SMAGLS
Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTG...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCATTTCGGTCATTTCCTaGCCAGAAGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFISVIS*PEGCVF
Trigger: GAACACACACCCTTCTGGGCAGGAAATGACCGAAAT...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCTGCCAAGTGCTCACCTaGACAGCCGTCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNACQVLT*TAVLTS
Trigger: GGATGTGAGGACGGCTGTGCAGGTGAGCACTTGGCA...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTGCCTTATGTAACCGCTaGCGGCATATATTTAAATAT +
Preference number: 4 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVALCNR*RHIFKY
Trigger: ATATTTAAATATATGCCGGCAGCGGTTACATAAGGC...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAATTACAGCTTGCATaGTCCCCGTGTCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLQLQLA*SPCPAA
Trigger: CGCAGCAGGACACGGGGACCATGCAAGCTGTAATTG...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCTTGTCCAGCTATCATTaGATCCTGAAGAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMALSSYH*ILKKST
Trigger: AGTGCTCTTCTTCAGGATCCAATGATAGCTGGACAA...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATTGGCCCAACTGGAAATaGGGGGTGGGTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYWPNWK*GVGLTG
Trigger: GCCAGTCAGACCCACCCCCCATTTCCAGTTGGGCCA...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTAGAACCAGTCCTTGCTaGCCTCCTAGCTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFRTSPC*PPSCPA
Trigger: GGCGGGACAGCTAGGAGGCCAGCAAGGACTGGTTCT...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGCTGCCACCAGCCCTTaGATGTTGGTGAGATTCGCT +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGAATSP*MLVRFA
Trigger: AGCGAATCTCACCAACATCCAAGGGCTGGTGGCAGC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGGGGCTGGAGCTCTGCTaGGTTGGAGATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLGLELC*VGDGWF
Trigger: GAACCAACCATCTCCAACCCAGCAGAGCTCCAGCCC...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGTTGCTATGGAGCTCATaGCTGCTGCAGCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRLLWSS*LLQPLQ
Trigger: CTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAA...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCCTGTGAGCTTGCTATaGAGCTCATGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLPVSLL*SSWLLQ
Trigger: CTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGG...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCCTGTGAGCTTGCTATaGAGCTCATGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGPVSLL*SSWLLQ
Trigger: CTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGCGTTTGTGAGGAGCTaGGGGGTGATTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASAFVRS*GVIGCT
Trigger: AGTGCAGCCAATCACCCCCCAGCTCCTCACAAACGC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGACTGTGGCGATGATCTaGCCCTGGGCGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLTVAMI*PWAFVR
Trigger: CCTCACAAACGCCCAGGGCCAGATCATCGCCACAGT...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCACTGTGGCGATGATCTaGCCCTGGGCGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFTVAMI*PWAFVR
Trigger: CCTCACAAACGCCCAGGGCCAGATCATCGCCACAGT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGACAGCGTGATGCCCTaGGTGTTGATCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNDSVMP*VLITGR
Trigger: CCTGCCCGTGATCAACACCCAGGGCATCACGCTGTC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAGGTTGGTGGAGCTGCTaGCCGGGCTTGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PSYVILLTSLRRELFLMEGWWSC*PGLMGD
Trigger: GTCACCCATCAAGCCCGGCCAGCAGCTCCACCAACC...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCAGTCTGGGAGGGTTGGTaGAGCTGCTGGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFAVWEGW*SCWPGL
Trigger: CAAGCCCGGCCAGCAGCTCCACCAACCCTCCCAGAC...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTTGGTGTGTCTGCAGATaGCCGACTGGCTGTACGCGG +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFWCVCR*PTGCTR
Trigger: CCGCGTACAGCCAGTCGGCCATCTGCAGACACACCA...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGTGAGCCTCACAGAATaGCTTCAACAATGGTACCCA +
Preference number: 4 (lower is better)
Translates to: SNLAGYKRPGFSLAVRLLVSLTE*LQQWYP
Trigger: TGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCAC...TAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCACACTTAAACGCCATTaGCATATGAAGTTGTTTACA +
Preference number: 4 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCTLKRH*HMKLFT
Trigger: TGTAAACAACTTCATATGCCAATGGCGTTTAAGTGT...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTTCAGTTTGGCTTCTTaGTCACAAGTCTATCATGTC +
Preference number: 4 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVFSLAS*SQVYHV
Trigger: GACATGATAGACTTGTGACCAAGAAGCCAAACTGAA...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCTATAGTGTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SNLAGYKRPGFS*AVRLLAIVFSW
Trigger: CCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR TCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCATGCACTTGCAAGCCCTaGGTGCCGCTTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESCTCKP*VPLAAW
Trigger: CCAAGCAGCAAGCGGCACTCAGGGCTTGCAAGTGCA...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTATGGATGCTTGGCTGTaGGCCAGGTGCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASMDAWL*ARCRRL
Trigger: CAACCTTCTGCACCTGGCTCACAGCCAAGCATCCAT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATATGGATGCTTGGCTGTaGGCCAGGTGCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDMDAWL*ARCRRL
Trigger: CAACCTTCTGCACCTGGCTCACAGCCAAGCATCCAT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTGCCGGACGGGACTTTaGGACATGGATGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNCRTGL*DMDAWL
Trigger: CAGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCA...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTTCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASSQSGH*GSQGPG
Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGTCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRSQSGH*GSQGPG
Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCTCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNASQSGH*GSQGPG
Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTTGCTGGTAGTCTCTTaGTTGCTGCATGAATCATTG +
Preference number: 4 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCLLVVS*LLHESL
Trigger: CAATGATTCATGCAGCAATCAAGAGACTACCAGCAA...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGGTGTTGGTCAGGAGTaGCTGGGTCTGATAATGCTG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGGVGQE*LGLIML
Trigger: CAGCATTATCAGACCCAGGCACTCCTGACCAACACC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCCATAATGCCTCCGGCTaGAGCTGCTGCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCHNASG*SCCHQP
Trigger: GGGCTGGTGGCAGCAGCTGCAGCCGGAGGCATTATG...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTTATGGAGCTCATGGCTaGTGCAGCCGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTYGAHG*CSRCSL
Trigger: CAGGCTGCAGCGGCTGCAGCAGCCATGAGCTCCATA...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGACTGGAGAGGGCATTaGCAAAGGCCTGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASDWRGH*QRPVSL
Trigger: CAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCGACTGGAGAGGGCATTaGCAAAGGCCTGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFDWRGH*QRPVSL
Trigger: CAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTC...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTCCAGGTGCAGAAGGTTaGCTTGGGAGGCTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFPGAEG*LGRLLD
Trigger: GTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGG...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCCCAGGTGCAGAAGGTTaGCTTGGGAGGCTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSPGAEG*LGRLLD
Trigger: GTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGG...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCCAGGTGCAGAAGGTTaGCTTGGGAGGCTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNPGAEG*LGRLLD
Trigger: GTCAAGCAGCCTCCCAAGGCAACCTTCTGCACCTGG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTAACTCGGTCAGGTTCTaGATACCTGCTCGATGGCGG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASNSVRF*IPARWR
Trigger: CCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCAACTCGGTCAGGTTCTaGATACCTGCTCGATGGCGG +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNANSVRF*IPARWR
Trigger: CCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATAGGAGGTGCGCCGCTTaGGCTTTTTGGATGGTTCAC +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDRRCAA*AFWMVH
Trigger: GTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGAGGAGGTGCGCCGCTTaGGCTTTTTGGATGGTTCAC +
Preference number: 4 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKRRCAA*AFWMVH
Trigger: GTGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCCAAGTGCTCACCTaGACAGCCGTCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFCQVLT*TAVLTS
Trigger: GGATGTGAGGACGGCTGTGCAGGTGAGCACTTGGCA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCCAATTACAGCTTGCATaGTCCCCGTGTCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAQLQLA*SPCPAA
Trigger: CGCAGCAGGACACGGGGACCATGCAAGCTGTAATTG...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCCCCGAAGAGCTTGCTaGGAGTGTCCTCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYPRRAC*ECPRCH
Trigger: ATGACAGCGAGGACACTCCCAGCAAGCTCTTCGGGG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCGTCAGAAGTGGCTGTaGCCCAACTGGAAATGGGGG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYRQKWL*PNWKWG
Trigger: CCCCCATTTCCAGTTGGGCCACAGCCACTTCTGACG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTCTGTGCCGTCAGAAGTaGCTGTGGCCCAACTGGAAA +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASLCRQK*LWPNWK
Trigger: TTTCCAGTTGGGCCACAGCCACTTCTGACGGCACAG...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGGAGCTGCTGGAGCTaGGAGTTCAGGGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFWSCWS*EFRDEV
Trigger: TACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCA...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGGTTGGTTCTGGTTCTaGGAGTGGGAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNGWFWF*EWEWGW
Trigger: CCAACCCCACTCCCACTCCCAGAACCAGAACCAACC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGGTTGGTTCTGGTTCTaGGAGTGGGAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFGWFWF*EWEWGW
Trigger: CCAACCCCACTCCCACTCCCAGAACCAGAACCAACC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATGGAGATGGTTGGTTCTaGTTCTGGGAGTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDGDGWF*FWEWEW
Trigger: CCACTCCCACTCCCAGAACCAGAACCAACCATCTCC...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGGAGCTCTGCTGGGTTaGAGATGGTTGGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGGALLG*RWLVLV
Trigger: AACCAGAACCAACCATCTCCAACCCAGCAGAGCTCC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATGGAGCTCTGCTGGGTTaGAGATGGTTGGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHGALLG*RWLVLV
Trigger: AACCAGAACCAACCATCTCCAACCCAGCAGAGCTCC...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGGGCTGGAGCTCTGCTaGGTTGGAGATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNGLELC*VGDGWF
Trigger: GAACCAACCATCTCCAACCCAGCAGAGCTCCAGCCC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGTGCCGCTTGCTGCTTaGCTCGATGGCCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYVPLAA*LDGPGL
Trigger: TAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCAC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCGTGCCGCTTGCTGCTTaGCTCGATGGCCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSVPLAA*LDGPGL
Trigger: TAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCAC...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTACTGTGGCGATGATCTaGCCCTGGGCGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFTVAMI*PWAFVR
Trigger: CCTCACAAACGCCCAGGGCCAGATCATCGCCACAGT...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTGGTTGGTGGAGCTGCTaGCCGGGCTTGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFGWWSC*PGLMGD
Trigger: GTCACCCATCAAGCCCGGCCAGCAGCTCCACCAACC...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTTGGTGTGTCTGCAGATaGCCGACTGGCTGTACGCGG +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLWCVCR*PTGCTR
Trigger: CCGCGTACAGCCAGTCGGCCATCTGCAGACACACCA...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVCGRKK*LLRMVC
Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACA...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFCIPAR*RASASA
Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTACTTGCGCTTTTTGGATaGTTCACTCCCGATAAACTC +
Preference number: 4 (lower is better)
Translates to: SNLAGYKRPGFSLAVRLLLALFG*FTPDKL
Trigger: GAGTTTATCGGGAGTGAACCATCCAAAAAGCGCAAG...TAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSVFFSK*ALRISR
Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCCAAAGGGACTGCCGTaGCCGGCTCGTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNPKGLP*PARAVL
Trigger: TAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCATGGTACCCACCCCATaGGTGGAGACAGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFMVPTP*VETVDG
Trigger: CCCATCTACTGTCTCCACCCATGGGGTGGGTACCAT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGAATGGCTTCAACAATaGTACCCACCCCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGEWLQQ*YPPHGW
Trigger: CCACCCATGGGGTGGGTACCATTGTTGAAGCCATTC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCTTCTCCCCACTTCTGTaGCCTTCCAGCAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSFSPLL*PSSRPQ
Trigger: CTGGGGTCTGCTGGAAGGCCACAGAAGTGGGGAGAA...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGTTTCAAACCTGCAGATaGCCGACTGGCTGTACGCGG +
Preference number: 4 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLFQTCR*PTGCTR
Trigger: CCGCGTACAGCCAGTCGGCCATCTGCAGGTTTGAAA...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGTCCTCGCTGTCATTTaGTTCCACAGGCGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNVLAVI*FHRRKQ
Trigger: CTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGAC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGCCCTTGGATGTTGGTaGGATTCGCTGTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFALGCW*DSLLAV
Trigger: CACTGCCAACAGCGAATCTCACCAACATCCAAGGGC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCGCCCTTGGATGTTGGTaGGATTCGCTGTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSALGCW*DSLLAV
Trigger: CACTGCCAACAGCGAATCTCACCAACATCCAAGGGC...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATGCAGCCGCTGCAGCCTaGCTTGCTAGTGGATTATTA +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDAAAAA*LASGLL
Trigger: TAATAATCCACTAGCAAGTCAGGCTGCAGCGGCTGC...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCCGTTTGAGGATTGCTaGCTAACTGGCCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNPFEDC*LTGPRS
Trigger: TGAGCGTGGGCCAGTTAGTCAGCAATCCTCAAACGG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTTGGCTATCAGACTTCTaGGAGAAATTGCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVWLSDF*EKLLCT
Trigger: TGTGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCA...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATACAGCAGAAGCTAACTaGTGTGCCGTCAGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDTAEAN*CAVRSG
Trigger: GCCACTTCTGACGGCACAGCAGTTAGCTTCTGCTGT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATATCCACCTCACCCGCTaGCGTTTGAGGATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNIHLTR*RLRIAD
Trigger: GTCAGCAATCCTCAAACGGCAGCGGGTGAGGTGGAT...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTATCCACCTCACCCGCTaGCGTTTGAGGATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFIHLTR*RLRIAD
Trigger: GTCAGCAATCCTCAAACGGCAGCGGGTGAGGTGGAT...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTCAGGATGGTGTGTCTaGAGATGGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFSGWCV*RWPTGC
Trigger: ACAGCCAGTCGGCCATCTGCAGACACACCATCCTGA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
CDS-3UTR GCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGCCGTGGCCGGCTCGTaGTGTTTTAAGCGTTTAATT +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGAVAGS*CFKRLI
Trigger: AATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTATCCACCTCACCCGCTaGCGTTTGAGGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTIHLTR*RLRICW
Trigger: CCAGCAGATCCTCAAACGGCAGCGGGTGAGGTGGAT...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416452.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTCAATTACAGCTTGCATaGTCCCCGTGTCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFQLQLA*SPCPAA
Trigger: CGCAGCAGGACACGGGGACCATGCAAGCTGTAATTG...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTCAATTACAGCTTGCATaGTCCCCGTGTCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFQLQLA*SPCPAA
Trigger: CGCAGCAGGACACGGGGACCATGCAAGCTGTAATTG...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTCCCCGAAGAGCTTGCTaGGAGTGTCCTCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLPRRAC*ECPRCH
Trigger: ATGACAGCGAGGACACTCCCAGCAAGCTCTTCGGGG...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTCCCCGAAGAGCTTGCTaGGAGTGTCCTCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTPRRAC*ECPRCH
Trigger: ATGACAGCGAGGACACTCCCAGCAAGCTCTTCGGGG...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCTGGCCCAACTGGAAATaGGGGGTGGGTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCWPNWK*GVGLTG
Trigger: GCCAGTCAGACCCACCCCCCATTTCCAGTTGGGCCA...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCGGTGAGATTCGCTGTTaGCAGTGTGAGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFGEIRC*QCENQS
Trigger: GGACTGGTTCTCACACTGCCAACAGCGAATCTCACC...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCGCTGCCACCAGCCCTTaGATGTTGGTGAGATTCGCT +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSAATSP*MLVRFA
Trigger: AGCGAATCTCACCAACATCCAAGGGCTGGTGGCAGC...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTGCCACCAGCCCTTaGATGTTGGTGAGATTCGCT +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFAATSP*MLVRFA
Trigger: AGCGAATCTCACCAACATCCAAGGGCTGGTGGCAGC...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTTGGAGCTGCTGGAGCTaGGAGTTCAGGGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFWSCWS*EFRDEV
Trigger: TACCTCATCCCTGAACTCCCAGCTCCAGCAGCTCCA...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTGGGTTGGAGATGGTTaGTTCTGGTTCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDWVGDG*FWFWEW
Trigger: CCACTCCCAGAACCAGAACCAACCATCTCCAACCCA...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTAGGCAGGCCATGTCCTaGAGACTGACTAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASRQAMS*RLTRFL
Trigger: CAGAAACCTAGTCAGTCTCCAGGACATGGCCTGCCT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGAGGCAGGCCATGTCCTaGAGACTGACTAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKRQAMS*RLTRFL
Trigger: CAGAAACCTAGTCAGTCTCCAGGACATGGCCTGCCT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTTTGCTATGGAGCTCATaGCTGCTGCAGCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLLLWSS*LLQPLQ
Trigger: CTGCAGCGGCTGCAGCAGCCATGAGCTCCATAGCAA...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCCTGTGAGCTTGCTATaGAGCTCATGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNPVSLL*SSWLLQ
Trigger: CTGCAGCAGCCATGAGCTCCATAGCAAGCTCACAGG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACTGGATTAGGCATCAGTaGAATGGTCCCGATAATCTG +
Preference number: 4 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYWIRHQ*NGPDNL
Trigger: CAGATTATCGGGACCATTCCACTGATGCCTAATCCA...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTTGGCTCGATGGCCCTaGATTAGGCATCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLARWP*IRHQWN
Trigger: ATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTGCTGCTTGGCTCGATaGCCCTGGATTAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNCCLAR*PWIRHQ
Trigger: CTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCA...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTGCTTGGCTCGATaGCCCTGGATTAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFCCLAR*PWIRHQ
Trigger: CTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATTGCTGCTTGGCTCGATaGCCCTGGATTAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYCCLAR*PWIRHQ
Trigger: CTGATGCCTAATCCAGGGCCATCGAGCCAAGCAGCA...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGCGTTTGTGAGGAGCTaGGGGGTGATTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESAFVRS*GVIGCT
Trigger: AGTGCAGCCAATCACCCCCCAGCTCCTCACAAACGC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAACTGTGGCGATGATCTaGCCCTGGGCGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESTVAMI*PWAFVR
Trigger: CCTCACAAACGCCCAGGGCCAGATCATCGCCACAGT...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTATCACGGGCAGGATCTaGTTCCCAATGACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFITGRI*FPMTVA
Trigger: CGCCACAGTCATTGGGAACCAGATCCTGCCCGTGAT...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAGACAGCGTGATGCCCTaGGTGTTGATCACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRDSVMP*VLITGR
Trigger: CCTGCCCGTGATCAACACCCAGGGCATCACGCTGTC...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACCTTGCGCTTTTTGGATaGTTCACTCCCGATAAACTC +
Preference number: 4 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYLALFG*FTPDKL
Trigger: GAGTTTATCGGGAGTGAACCATCCAAAAAGCGCAAG...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYVESQG*SLVSVN
Trigger: ATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCTTGTTGTTGTTGTTGTaGAGTCCCAAGGGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: VWTVSTITAYASVDSSSSLLLLL*SPKGGV
Trigger: AACTCCACCCTTGGGACTCCACAACAACAACAACAA...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGTCACTAGGATCTGAGTaGAAAAGACACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLSLGSE*KRHCFS
Trigger: GGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGA...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTTGCTGCATGAATCATTaGAGGGGACAATTATACTGT +
Preference number: 4 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLCCMNH*RGQLYC
Trigger: ACAGTATAATTGTCCCCTCCAATGATTCATGCAGCA...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTAAAGTTTTGGGTTTCTaGGTTGTCCATGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLKVLGF*VVHVCA
Trigger: TGCACAAACATGGACAACCCAGAAACCCAAAACTTT...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp GCAGTCCTTCCTCCAGGTGGCAGGCTTGTATTCGCTTaGAACAGATCAAAGTTTTTGTTCCTTCGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AVLPPGGRLVFA*NRSKFLFLRCW
Trigger: CCAACAACGAAGGAACAAAAACTTTGATCTGTTCAAAGCGAATACAAGCCTGCCACCTGGAGGAAGGACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp CTGAAGAACCTGGCCCCCAATTCCAGTTGTTTAAATTaGCCCGCCACCTTTCTGCTCCATTTATATATCCCG +
Preference number: 4 (lower is better)
Translates to: LKNLAPNSSCLN*PATFLLHLYIP
Trigger: CGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCCAGGTTCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp TCACCTGCACAGCCGTCCTCACATCCCAACATGTCCTaGCTTATTAGGTTATTGTGGCCCACAGATCTTTTA +
Preference number: 4 (lower is better)
Translates to: SPAQPSSHPNMS*LIRLLWPTDLL
Trigger: TAAAAGATCTGTGGGCCACAATAACCTAATAAGCAAGGACATGTTGGGATGTGAGGACGGCTGTGCAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNHFTPH*QQGLTD
Trigger: GTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCATCGCTGTTGGCAGTGTaGGAACCAGTCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFASLLAV*EPVLAG
Trigger: GCCAGCAAGGACTGGTTCTCACACTGCCAACAGCGA...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATATTGCCAAAGGCCTGTaGGCTTGCTATGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDIAKGL*ACYGAH
Trigger: ATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAAT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTCAGCACTTAGTACCTaGAGGGGTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFSALST*RGAVLP
Trigger: AGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTGA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCACGTGGCCAACAGACTaGGAAAAATCCCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFTWPTD*EKSQAL
Trigger: CAGAGCTTGGGATTTTTCTCAGTCTGTTGGCCACGT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGAAACTTCCTTTCCCCTaGAGAACCTGGCCCCCAATT +
Preference number: 4 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRKLPFP*RTWPPI
Trigger: AATTGGGGGCCAGGTTCTTCAGGGGAAAGGAAGTTT...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCAAACTTCCTTTCCCCTaGAGAACCTGGCCCCCAATT +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAKLPFP*RTWPPI
Trigger: AATTGGGGGCCAGGTTCTTCAGGGGAAAGGAAGTTT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCTGTTTGTGCAGTTTTTaGGGTGGCGAAAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNACLCSF*GGERGS
Trigger: AGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACA...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCATATACCTACAAATATTaGGCTTTGGTCCAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSYTYKY*ALVQRR
Trigger: TCTACGCTGGACCAAAGCTCAATATTTGTAGGTATA...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTACAGCAGAAGCTAACTaGTGTGCCGTCAGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFTAEAN*CAVRSG
Trigger: GCCACTTCTGACGGCACAGCAGTTAGCTTCTGCTGT...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGACTGGAGAGGGCATTaGCAAAGGCCTGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESDWRGH*QRPVSL
Trigger: CAAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGACTTTGAGACATGGATaGTTGGCTGTGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRTLRHG*LAVSQV
Trigger: CACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGT...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATGCCGTGGCCGGCTCGTaGTGTTTTAAGCGTTTAATT +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDAVAGS*CFKRLI
Trigger: AATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACCTGTCAATCAACTTCTaGACTCACAACCATCACCAA +
Preference number: 4 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYLSINF*THNHHQ
Trigger: TTGGTGATGGTTGTGAGTGCAGAAGTTGATTGACAG...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGACGAACGATCGCGTTaGAATGCCATGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGDERSR*NAMFLT
Trigger: AGTCAGAAACATGGCATTGCAACGCGATCGTTCGTC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGGCACACGATCCAGGATaGCCTCCCGTCAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKAHDPG*PPVKKK
Trigger: TTTCTTTTTGACGGGAGGGCATCCTGGATCGTGTGC...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCATCCCAACATGTCCTTaGTTATTAGGTTATTGTGGC +
Preference number: 4 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFIPTCP*LLGYCG
Trigger: GCCACAATAACCTAATAAGCAAGGACATGTTGGGAT...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGCCACTTCCTCTTGGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTTGCCAAGTGCTCACCTaGACAGCCGTCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: FATSSWIIIRTFFQHLDSCQVLT*TAVLTS
Trigger: GGATGTGAGGACGGCTGTGCAGGTGAGCACTTGGCA...ACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCCAGATCTCTTTGTGGTaGCTCATAAGTGACCCCGGT +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAQISLW*LISDPG
Trigger: ACCGGGGTCACTTATGAGGCACCACAAAGAGATCTG...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTCCAGCTTTTCAAACCTaGAGATGGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFPAFQT*RWPTGC
Trigger: ACAGCCAGTCGGCCATCTGCAGGTTTGAAAAGCTGG...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCTTGTCCAGCTATCATTaGATCCTGAAGAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: VWTVSTITAYASVDSSSSLSSYH*ILKKST
Trigger: AGTGCTCTTCTTCAGGATCCAATGATAGCTGGACAA...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTCTGTGCCGTCAGAAGTaGCTGTGGCCCAACTGGAAA +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLLCRQK*LWPNWK
Trigger: TTTCCAGTTGGGCCACAGCCACTTCTGACGGCACAG...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTTGGGTTGGAGATGGTTaGTTCTGGTTCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFWVGDG*FWFWEW
Trigger: CCACTCCCAGAACCAGAACCAACCATCTCCAACCCA...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAGGGCTGGAGCTCTGCTaGGTTGGAGATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRGLELC*VGDGWF
Trigger: GAACCAACCATCTCCAACCCAGCAGAGCTCCAGCCC...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGTTGGCTCGATGGCCCTaGATTAGGCATCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKLARWP*IRHQWN
Trigger: ATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAA...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTGCGTTTGTGAGGAGCTaGGGGGTGATTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFAFVRS*GVIGCT
Trigger: AGTGCAGCCAATCACCCCCCAGCTCCTCACAAACGC...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCGGATTGCTGACTAACTaGCCCACGCTCAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFGLLTN*PTLKAE
Trigger: TTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAATCC...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATGGATTGCTGACTAACTaGCCCACGCTCAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDGLLTN*PTLKAE
Trigger: TTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAATCC...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGGGATTGCTGACTAACTaGCCCACGCTCAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLGLLTN*PTLKAE
Trigger: TTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAATCC...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGTGGTGTGTCTGCAGATaGCCGACTGGCTGTACGCGG +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTWCVCR*PTGCTR
Trigger: CCGCGTACAGCCAGTCGGCCATCTGCAGACACACCA...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCCAGCTTTTCAAACCTaGCAGGATACAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGPAFQT*QDTKGQ
Trigger: CTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASTGLIF*ALLGVM
Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTCCAAAGGGACTGCCGTaGCCGGCTCGTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFPKGLP*PARAVL
Trigger: TAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGG...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGAATGGCTTCAACAATaGTACCCACCCCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNEWLQQ*YPPHGW
Trigger: CCACCCATGGGGTGGGTACCATTGTTGAAGCCATTC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACCTTATTAGGTTATTGTaGCCCACAGATCTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: PHLSTPHSFHSALTARAYLIRLL*PTDLLS
Trigger: ACTTAAAAGATCTGTGGGCCACAATAACCTAATAAG...GTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCACCGTCTGCCTGTACCTaGGTGAAAACACCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESPSACT*VKTPVA
Trigger: TGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGG...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTTGCTGCATGAATCATTaGAGGGGACAATTATACTGT +
Preference number: 4 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISCCMNH*RGQLYC
Trigger: ACAGTATAATTGTCCCCTCCAATGATTCATGCAGCA...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTACAAATATTGAGCTTTaGTCCAGCGTAGAGAAACGA +
Preference number: 4 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISTNIEL*SSVEKR
Trigger: TCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGT...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGAAGCAGATCTCTTTGTaGTGCCTCATAAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGKQISL*CLISDP
Trigger: GGGGTCACTTATGAGGCACCACAAAGAGATCTGCTT...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTG +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNATARAY*LVQLSL
Trigger: CAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCAATGGATGCTTGGCTGTaGGCCAGGTGCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFAMDAWL*ARCRRL
Trigger: CAACCTTCTGCACCTGGCTCACAGCCAAGCATCCAT...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCCCGTTTGAGGATTGCTaGCTAACTGGCCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCPFEDC*LTGPRS
Trigger: TGAGCGTGGGCCAGTTAGTCAGCAATCCTCAAACGG...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTTCAGCACTTAGTACCTaGAGGGGTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTSALST*RGAVLP
Trigger: AGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTGA...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCAGCTTATGCCAGTGTTaGCAGTTCATCGAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNASLCQC*QFIEQS
Trigger: GCTTTGCTCGATGAACTGTCAACACTGGCATAAGCT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCAACAGCAAGCAAATTaGCAGCTCTCTTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFQQQAN*QLSFAC
Trigger: GCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTAACGCCATTGGCATATaGAGTTGTTTACAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPNAIGI*SCLQVD
Trigger: GTCTACTTGTAAACAACTTCATATGCCAATGGCGTT...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAACAGCAGAAGCTAACTaGTGTGCCGTCAGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSYVILLTSLRRELFLMETAEAN*CAVRSG
Trigger: GCCACTTCTGACGGCACAGCAGTTAGCTTCTGCTGT...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATACTTTGAGACATGGATaGTTGGCTGTGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYTLRHG*LAVSQV
Trigger: CACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGT...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGCCACTTCCTCTTGGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTTCAGGATGGTGTGTCTaGAGATGGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FATSSWIIIRTFFQHLDSSGWCV*RWPTGC
Trigger: ACAGCCAGTCGGCCATCTGCAGACACACCATCCTGA...ACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR GCA 90 bp TTTGCCACTTCCTCTTGGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTAACTCGGTCAGGTTCTaGATACCTGCTCGATGGCGG +
Preference number: 4 (lower is better)
Translates to: FATSSWIIIRTFFQHLDSNSVRF*IPARWR
Trigger: CCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT...ACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGGTGTTCTTCAGGGCTTaGCTCTTATTGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLVFFRA*LLLQNQ
Trigger: TTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACAC...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGCCGTGGCCGGCTCGTaGTGTTTTAAGCGTTTAATT +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNAVAGS*CFKRLI
Trigger: AATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGAAGAAATACACAAAGTaGAGCTTTACTGACCATACA +
Preference number: 4 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQKKYTK*SFTDHT
Trigger: TGTATGGTCAGTAAAGCTGCACTTTGTGTATTTCTT...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGTTCTGGTTCTGGGAGTaGGAGTGGGGTTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTFWFWE*EWGWCC
Trigger: GCAGCACCAACCCCACTCCCACTCCCAGAACCAGAA...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTGGAGCTCTGCTGGGTTaGAGATGGTTGGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLGALLG*RWLVLV
Trigger: AACCAGAACCAACCATCTCCAACCCAGCAGAGCTCC...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGGGGCTGGAGCTCTGCTaGGTTGGAGATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTGLELC*VGDGWF
Trigger: GAACCAACCATCTCCAACCCAGCAGAGCTCCAGCCC...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTGGATTAGGCATCAGTaGAATGGTCCCGATAATCTG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGWIRHQ*NGPDNL
Trigger: CAGATTATCGGGACCATTCCACTGATGCCTAATCCA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTTTGGCTCGATGGCCCTaGATTAGGCATCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFLARWP*IRHQWN
Trigger: ATTCCACTGATGCCTAATCCAGGGCCATCGAGCCAA...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGGTGCCGCTTGCTGCTTaGCTCGATGGCCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTVPLAA*LDGPGL
Trigger: TAATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCAC...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCAATCACGGGCAGGATCTaGTTCCCAATGACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFAITGRI*FPMTVA
Trigger: CGCCACAGTCATTGGGAACCAGATCCTGCCCGTGAT...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGGATTGCTGACTAACTaGCCCACGCTCAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFGLLTN*PTLKAE
Trigger: TTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAATCC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGAIVFS*ASCGRK
Trigger: TTTCCTACCACAGGAAGCCCAAGAGAACACTATAGC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFTGLIF*ALLGVM
Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCTTGCGCTTTTTGGATaGTTCACTCCCGATAAACTC +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLLALFG*FTPDKL
Trigger: GAGTTTATCGGGAGTGAACCATCCAAAAAGCGCAAG...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGVFFSK*ALRISR
Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTATGGTACCCACCCCATaGGTGGAGACAGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFMVPTP*VETVDG
Trigger: CCCATCTACTGTCTCCACCCATGGGGTGGGTACCAT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAATGGTACCCACCCCATaGGTGGAGACAGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRMVPTP*VETVDG
Trigger: CCCATCTACTGTCTCCACCCATGGGGTGGGTACCAT...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCGTGAGCCTCACAGAATaGCTTCAACAATGGTACCCA +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAVSLTE*LQQWYP
Trigger: TGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCAC...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
3UTR CAA 72 bp GTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTaGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VHFNSKQIDSSL*PAPLMEHRLPV
Trigger: TACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCAAGAGAGTTCATGCCTaGCCAATTACAGCTTGCATG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFKRVHA*PITACM
Trigger: CATGCAAGCTGTAATTGGTCAGGCATGAACTCTCTT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNTARAY*LVQLSL
Trigger: CAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGT...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTG +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSTARAY*LVQLSL
Trigger: CAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFHFTPH*QQGLTD
Trigger: GTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATG...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGGTCCTCGCTGTCATTTaGTTCCACAGGCGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTVLAVI*FHRRKQ
Trigger: CTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGAC...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGACGTGTCCTGCTGCGCTaGGAGATAGCAATCCATCAT +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRRVLLR*EIAIHH
Trigger: ATGATGGATTGCTATCTCTCAGCGCAGCAGGACACG...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGCCACTTCCTCTTGGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTCGTGTCCTGCTGCGCTaGGAGATAGCAATCCATCAT +
Preference number: 4 (lower is better)
Translates to: FATSSWIIIRTFFQHLDSRVLLR*EIAIHH
Trigger: ATGATGGATTGCTATCTCTCAGCGCAGCAGGACACG...ACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATAGTAATTATTCCCCCTaGAAAAAGTCTGCCATCGCT +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHSNYSP*KKSAIA
Trigger: AGCGATGGCAGACTTTTTTCAGGGGGAATAATTACT...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCCAACAGCAAGCAAATTaGCAGCTCTCTTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSQQQAN*QLSFAC
Trigger: GCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTG...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCTCTTGATTGCTGCATaGATCATTGGAGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFLLIAA*IIGGDN
Trigger: ATTGTCCCCTCCAATGATTCATGCAGCAATCAAGAG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTACCCAAGAGAGTTCATaGCTGACCAATTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASTQESS*LTNYSL
Trigger: CAAGCTGTAATTGGTCAGGCATGAACTCTCTTGGGT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTACTTTGAGACATGGATaGTTGGCTGTGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLTLRHG*LAVSQV
Trigger: CACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGTCAGGATGGTGTGTCTaGAGATGGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTSGWCV*RWPTGC
Trigger: ACAGCCAGTCGGCCATCTGCAGACACACCATCCTGA...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518318.7
ENST00000673891.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTATTTCGGTCATTTCCTaGCCAGAAGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFISVIS*PEGCVF
Trigger: GAACACACACCCTTCTGGGCAGGAAATGACCGAAAT...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGTGTTCTTCAGGGCTTaGCTCTTATTGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFVFFRA*LLLQNQ
Trigger: TTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACAC...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGTGTTCTTCAGGGCTTaGCTCTTATTGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASVFFRA*LLLQNQ
Trigger: TTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACAC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGCCGTGGCCGGCTCGTaGTGTTTTAAGCGTTTAATT +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESAVAGS*CFKRLI
Trigger: AATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCTGTCAATCAACTTCTaGACTCACAACCATCACCAA +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLSINF*THNHHQ
Trigger: TTGGTGATGGTTGTGAGTGCAGAAGTTGATTGACAG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATTTTTGGAGTCTCTCCTaGATTTCACTAGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: SVDSSSSKALVILESLLHFWSLS*ISLGSE
Trigger: CTCAGATCCTAGTGAAATGCAGGAGAGACTCCAAAA...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTTTTGGAGTCTCTCCTaGATTTCACTAGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGFWSLS*ISLGSE
Trigger: CTCAGATCCTAGTGAAATGCAGGAGAGACTCCAAAA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCCAGCTCTCTTTTGCCTaGTCCTTTAATGGAACACCG +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSQLSFA*SFNGTP
Trigger: CGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTG...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTTGTCCAGCTATCATTaGATCCTGAAGAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLSSYH*ILKKST
Trigger: AGTGCTCTTCTTCAGGATCCAATGATAGCTGGACAA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTGGTGAGATTCGCTGTTaGCAGTGTGAGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFGEIRC*QCENQS
Trigger: GGACTGGTTCTCACACTGCCAACAGCGAATCTCACC...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCCAGCTTTTCAAACCTaGCAGGATACAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYPAFQT*QDTKGQ
Trigger: CTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: PSYVILLTSLRRELFLMETGLIF*ALLGVM
Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGTTGTTGTTGTTGTTGTaGAGTCCCAAGGGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKLLLLL*SPKGGV
Trigger: AACTCCACCCTTGGGACTCCACAACAACAACAACAA...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCTTGTTGTTGTTGTTGTaGAGTCCCAAGGGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNALLLLL*SPKGGV
Trigger: AACTCCACCCTTGGGACTCCACAACAACAACAACAA...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTAGTCCTTCCTCCAGGTaGCAGGCTTGTATTCGCTTT +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLSPSSR*QACIRF
Trigger: AAAGCGAATACAAGCCTGCCACCTGGAGGAAGGACT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGTCTGCCATCGCTATTaGAATGAAAGAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGVCHRY*NERSSR
Trigger: TCTGCTACTTCTTTCATTCCAATAGCGATGGCAGAC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAGTGCAGTTTTTGAGGTaGCGAAAGGGGCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PSYVILLTSLRRELFLMEVQFLR*RKGLCD
Trigger: ATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCAC...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAACACTTAAACGCCATTaGCATATGAAGTTGTTTACA +
Preference number: 4 (lower is better)
Translates to: SNLAGYKRPGFSLAVRLLTLKRH*HMKLFT
Trigger: TGTAAACAACTTCATATGCCAATGGCGTTTAAGTGT...TAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673891.1
3UTR CAA 72 bp GTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTaGATGGAATTTGGAGCAGGTCCTAGGAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: VILLTSLRRELF*MEFGAGPRRIQ
Trigger: TTGGATTCTCCTAGGACCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGCTATCATTGGATCCTaGAGAAGAGCACTCATTTGC +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFAIIGS*RRALIC
Trigger: GCAAATGAGTGCTCTTCTTCAGGATCCAATGATAGC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAATTGCCAAAGGCCTGTaGGCTTGCTATGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRIAKGL*ACYGAH
Trigger: ATGAGCTCCATAGCAAGCTCACAGGCCTTTGGCAAT...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGTGAATTTTGCTTCTaGTTATGGGTGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFCEFCF*LWVGIS
Trigger: AGAGATGCCCACCCATAATCAGAAGCAAAATTCACA...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGTGTGAATTTTGCTTCTaGTTATGGGTGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRCEFCF*LWVGIS
Trigger: AGAGATGCCCACCCATAATCAGAAGCAAAATTCACA...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCACTCTGGTGTGGACAGTaGGCACAATTACAGCTTATG +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESLWCGQ*AQLQLM
Trigger: CATAAGCTGTAATTGTGCTCACTGTCCACACCAGAG...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGCCACTTCCTCTTGGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTACGTGGCCAACAGACTaGGAAAAATCCCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FATSSWIIIRTFFQHLDSTWPTD*EKSQAL
Trigger: CAGAGCTTGGGATTTTTCTCAGTCTGTTGGCCACGT...ACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGAGTAATTATTCCCCCTaGAAAAAGTCTGCCATCGCT +
Preference number: 4 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKSNYSP*KKSAIA
Trigger: AGCGATGGCAGACTTTTTTCAGGGGGAATAATTACT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTAAACTTCCTTTCCCCTaGAGAACCTGGCCCCCAATT +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFKLPFP*RTWPPI
Trigger: AATTGGGGGCCAGGTTCTTCAGGGGAAAGGAAGTTT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCTTGCTGGTAGTCTCTTaGTTGCTGCATGAATCATTG +
Preference number: 4 (lower is better)
Translates to: WVATLTFSSWKHKRHLNALLVVS*LLHESL
Trigger: CAATGATTCATGCAGCAATCAAGAGACTACCAGCAA...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCAAAAATCACTGCACATaGATGGTGTTACGACTGTCG +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFKNHCT*MVLRLS
Trigger: CGACAGTCGTAACACCATTCATGTGCAGTGATTTTT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGAAAGTGCAGCTTTACTaGCCATACAGATATTGCTCT +
Preference number: 4 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLKVQLY*PYRYCS
Trigger: AGAGCAATATCTGTATGGTCAGTAAAGCTGCACTTT...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTAGAAGAGCACTCATTTaGCACTTCCTCTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASRRALI*HFLLDH
Trigger: ATGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGTAGCTTGTAGATTTTaGAGTGGCAGAGTCATAATG +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGVACRF*SGRVIM
Trigger: CATTATGACTCTGCCACTGCAAAATCTACAAGCTAC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAATTTCGGTCATTTCCTaGCCAGAAGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PSYVILLTSLRRELFLMEISVIS*PEGCVF
Trigger: GAACACACACCCTTCTGGGCAGGAAATGACCGAAAT...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGTGTTCTTCAGGGCTTaGCTCTTATTGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFVFFRA*LLLQNQ
Trigger: TTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACAC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATACGATCGCGTTGCAATaGCATGTTTCTGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYTIALQ*HVSDFG
Trigger: ACCAAAGTCAGAAACATGGCATTGCAACGCGATCGT...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCGCACACGATCCAGGATaGCCTCCCGTCAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCAHDPG*PPVKKK
Trigger: TTTCTTTTTGACGGGAGGGCATCCTGGATCGTGTGC...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATGCCCGCCACCTTTCTaGTCCATTTATATATCCCGA +
Preference number: 4 (lower is better)
Translates to: PSYVILLTSLRRELFLMECPPPF*SIYISR
Trigger: TCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCA...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCACAGATCTCTTTGTGGTaGCTCATAAGTGACCCCGGT +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFAQISLW*LISDPG
Trigger: ACCGGGGTCACTTATGAGGCACCACAAAGAGATCTG...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFCGRKK*LLRMVC
Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFAIVFS*ASCGRK
Trigger: TTTCCTACCACAGGAAGCCCAAGAGAACACTATAGC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTCTTGCGCTTTTTGGATaGTTCACTCCCGATAAACTC +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFLALFG*FTPDKL
Trigger: GAGTTTATCGGGAGTGAACCATCCAAAAAGCGCAAG...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCCTTGCGCTTTTTGGATaGTTCACTCCCGATAAACTC +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSLALFG*FTPDKL
Trigger: GAGTTTATCGGGAGTGAACCATCCAAAAAGCGCAAG...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSVFFSK*ALRISR
Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNVFFSK*ALRISR
Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNVESQG*SLVSVN
Trigger: ATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATTTGTTGTTGTTGTTGTaGAGTCCCAAGGGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYLLLLL*SPKGGV
Trigger: AACTCCACCCTTGGGACTCCACAACAACAACAACAA...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCAGTCCTTCCTCCAGGTaGCAGGCTTGTATTCGCTTT +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCSPSSR*QACIRF
Trigger: AAAGCGAATACAAGCCTGCCACCTGGAGGAAGGACT...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTGCTATCATTGGATCCTaGAGAAGAGCACTCATTTGC +
Preference number: 4 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTAIIGS*RRALIC
Trigger: GCAAATGAGTGCTCTTCTTCAGGATCCAATGATAGC...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAAGCTTATGCCAGTGTTaGCAGTTCATCGAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRSLCQC*QFIEQS
Trigger: GCTTTGCTCGATGAACTGTCAACACTGGCATAAGCT...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCCTCTGGTGTGGACAGTaGGCACAATTACAGCTTATG +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCLWCGQ*AQLQLM
Trigger: CATAAGCTGTAATTGTGCTCACTGTCCACACCAGAG...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTTGGCTATCAGACTTCTaGGAGAAATTGCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFWLSDF*EKLLCT
Trigger: TGTGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCA...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTCTCTTGATTGCTGCATaGATCATTGGAGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTLLIAA*IIGGDN
Trigger: ATTGTCCCCTCCAATGATTCATGCAGCAATCAAGAG...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATTTGCTGGTAGTCTCTTaGTTGCTGCATGAATCATTG +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYLLVVS*LLHESL
Trigger: CAATGATTCATGCAGCAATCAAGAGACTACCAGCAA...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATAAAAATCACTGCACATaGATGGTGTTACGACTGTCG +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNKNHCT*MVLRLS
Trigger: CGACAGTCGTAACACCATTCATGTGCAGTGATTTTT...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCAAAAATCACTGCACATaGATGGTGTTACGACTGTCG +
Preference number: 4 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSKNHCT*MVLRLS
Trigger: CGACAGTCGTAACACCATTCATGTGCAGTGATTTTT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGTACAAGTAGAGTGCTaGGGTAAAACATTGATGAAC +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASVQVEC*GKTLMN
Trigger: GTTCATCAATGTTTTACCTCAGCACTCTACTTGTAC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGACTTTGAGACATGGATaGTTGGCTGTGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTTLRHG*LAVSQV
Trigger: CACCTGGCTCACAGCCAAGCATCCATGTCTCAAAGT...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTTTTGGAGTCTCTCCTaGATTTCACTAGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFFWSLS*ISLGSE
Trigger: CTCAGATCCTAGTGAAATGCAGGAGAGACTCCAAAA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCTGCCCGCCACCTTTCTaGTCCATTTATATATCCCGA +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCCPPPF*SIYISR
Trigger: TCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCA...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATATCCCAACATGTCCTTaGTTATTAGGTTATTGTGGC +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDIPTCP*LLGYCG
Trigger: GCCACAATAACCTAATAAGCAAGGACATGTTGGGAT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGCCACTTCCTCTTGGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTCAGCTCTCTTTTGCCTaGTCCTTTAATGGAACACCG +
Preference number: 4 (lower is better)
Translates to: FATSSWIIIRTFFQHLDSQLSFA*SFNGTP
Trigger: CGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTG...ACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGACCAGCTTTTCAAACCTaGCAGGATACAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRPAFQT*QDTKGQ
Trigger: CTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CCA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTTCACTAGGATCTGAGTaGAAAAGACACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTSLGSE*KRHCFS
Trigger: GGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGA...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCATCCCAAGCTCTGGTGTaGACAGTGAGCACAATTACA +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFASQALV*TVSTIT
Trigger: TGTAATTGTGCTCACTGTCCACACCAGAGCTTGGGA...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGCTGCATGAATCATTaGAGGGGACAATTATACTGT +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFCCMNH*RGQLYC
Trigger: ACAGTATAATTGTCCCCTCCAATGATTCATGCAGCA...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATACAAATATTGAGCTTTaGTCCAGCGTAGAGAAACGA +
Preference number: 4 (lower is better)
Translates to: VVVESQGWSLVSVNFASDTNIEL*SSVEKR
Trigger: TCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTTTCAGTTTGGCTTCTTaGTCACAAGTCTATCATGTC +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASFSLAS*SQVYHV
Trigger: GACATGATAGACTTGTGACCAAGAAGCCAAACTGAA...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTTGGCTATCAGACTTCTaGGAGAAATTGCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLWLSDF*EKLLCT
Trigger: TGTGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCA...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTATACCTACAAATATTaGGCTTTGGTCCAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFYTYKY*ALVQRR
Trigger: TCTACGCTGGACCAAAGCTCAATATTTGTAGGTATA...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGTACAAGTAGAGTGCTaGGGTAAAACATTGATGAAC +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYVQVEC*GKTLMN
Trigger: GTTCATCAATGTTTTACCTCAGCACTCTACTTGTAC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATAAAGTGCAGCTTTACTaGCCATACAGATATTGCTCT +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNKVQLY*PYRYCS
Trigger: AGAGCAATATCTGTATGGTCAGTAAAGCTGCACTTT...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGTAGCTTGTAGATTTTaGAGTGGCAGAGTCATAATG +
Preference number: 4 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFVACRF*SGRVIM
Trigger: CATTATGACTCTGCCACTGCAAAATCTACAAGCTAC...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTACGATCGCGTTGCAATaGCATGTTTCTGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFTIALQ*HVSDFG
Trigger: ACCAAAGTCAGAAACATGGCATTGCAACGCGATCGT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGCCTTATGTAACCGCTaGCGGCATATATTTAAATAT +
Preference number: 4 (lower is better)
Translates to: VVVVESQGWSLVSVNFASALCNR*RHIFKY
Trigger: ATATTTAAATATATGCCGGCAGCGGTTACATAAGGC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCTGGATTAGGCATCAGTaGAATGGTCCCGATAATCTG +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCWIRHQ*NGPDNL
Trigger: CAGATTATCGGGACCATTCCACTGATGCCTAATCCA...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTGTGGAGTCCCAAGGGTaGAGTTTAGTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFVESQG*SLVSVN
Trigger: ATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTGTCTGCCATCGCTATTaGAATGAAAGAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLVCHRY*NERSSR
Trigger: TCTGCTACTTCTTTCATTCCAATAGCGATGGCAGAC...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAGTCTGCCATCGCTATTaGAATGAAAGAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PSYVILLTSLRRELFLMEVCHRY*NERSSR
Trigger: TCTGCTACTTCTTTCATTCCAATAGCGATGGCAGAC...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCTTATTAGGTTATTGTaGCCCACAGATCTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLIRLL*PTDLLS
Trigger: ACTTAAAAGATCTGTGGGCCACAATAACCTAATAAG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCAATCACTGCACATGAATaGTGTTACGACTGTCGGATG +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFAITAHE*CYDCRM
Trigger: CATCCGACAGTCGTAACACCATTCATGTGCAGTGAT...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCATCACTGCACATGAATaGTGTTACGACTGTCGGATG +
Preference number: 4 (lower is better)
Translates to: QFSIARLSATFSHIYTMCITAHE*CYDCRM
Trigger: CATCCGACAGTCGTAACACCATTCATGTGCAGTGAT...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGGCTTGTATTCGCTTTaGACAGATCAAAGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNGLYSL*TDQSFC
Trigger: ACAAAAACTTTGATCTGTTCAAAGCGAATACAAGCC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAAACGCCATTGGCATATaGAGTTGTTTACAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESNAIGI*SCLQVD
Trigger: GTCTACTTGTAAACAACTTCATATGCCAATGGCGTT...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAAAAGTGCAGCTTTACTaGCCATACAGATATTGCTCT +
Preference number: 4 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESKVQLY*PYRYCS
Trigger: AGAGCAATATCTGTATGGTCAGTAAAGCTGCACTTT...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTGTAGCTTGTAGATTTTaGAGTGGCAGAGTCATAATG +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLVACRF*SGRVIM
Trigger: CATTATGACTCTGCCACTGCAAAATCTACAAGCTAC...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCACTGTCAATCAACTTCTaGACTCACAACCATCACCAA +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFALSINF*THNHHQ
Trigger: TTGGTGATGGTTGTGAGTGCAGAAGTTGATTGACAG...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTATCCCAACATGTCCTTaGTTATTAGGTTATTGTGGC +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLIPTCP*LLGYCG
Trigger: GCCACAATAACCTAATAAGCAAGGACATGTTGGGAT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCAAGAAATACACAAAGTaGAGCTTTACTGACCATACA +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFKKYTK*SFTDHT
Trigger: TGTATGGTCAGTAAAGCTGCACTTTGTGTATTTCTT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTTTGCCACTTCCTCTTaGATCATTATAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFFATSS*IIIRTF
Trigger: GAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCATTGTCCAGCTATCATTaGATCCTGACCAATTACAGC +
Preference number: 4 (lower is better)
Translates to: EILRHFFGYQTSERNCFALSSYH*ILTNYS
Trigger: GCTGTAATTGGTCAGGATCCAATGATAGCTGGACAA...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518318.7
CDS-3UTR CCA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCACACACCTTCAGTGTaGTGTATTCCTTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VVESQGWSLVSVNFASDYHTPSV*CIPCLK
Trigger: TTTTAAACAAGGAATACACCACACTGAAGGTGTGTG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCTTATTAGGTTATTGTaGCCCACAGATCTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFLIRLL*PTDLLS
Trigger: ACTTAAAAGATCTGTGGGCCACAATAACCTAATAAG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTAAAGTTTTGGGTTTCTaGGTTGTCCATGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NMYISTASKLTALFCLLLKVLGF*VVHVCA
Trigger: TGCACAAACATGGACAACCCAGAAACCCAAAACTTT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGAGTAATTATTCCCCCTaGAAAAAGTCTGCCATCGCT +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTSNYSP*KKSAIA
Trigger: AGCGATGGCAGACTTTTTTCAGGGGGAATAATTACT...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTTATTGCAGGCTATTCTaGTTGTTAGATAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFYCRLF*LLDKPL
Trigger: AAGGGGCTTATCTAACAATCAGAATAGCCTGCAATA...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR TCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTAACGCCATTGGCATATaGAGTTGTTTACAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFNAIGI*SCLQVD
Trigger: GTCTACTTGTAAACAACTTCATATGCCAATGGCGTT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAGTAGCTTGTAGATTTTaGAGTGGCAGAGTCATAATG +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRVACRF*SGRVIM
Trigger: CATTATGACTCTGCCACTGCAAAATCTACAAGCTAC...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAACAAATATTGAGCTTTaGTCCAGCGTAGAGAAACGA +
Preference number: 4 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRTNIEL*SSVEKR
Trigger: TCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGT...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp TTTGCCACTTCCTCTTGGATCATTATAAGAACATTCTTTCAGCATCTTGACAGTGCCTTATGTAACCGCTaGCGGCATATATTTAAATAT +
Preference number: 4 (lower is better)
Translates to: FATSSWIIIRTFFQHLDSALCNR*RHIFKY
Trigger: ATATTTAAATATATGCCGGCAGCGGTTACATAAGGC...ACTGTCAAGATGCTGAAAGAATGTTCTTATAATGATCCAAGAGGAAGTGGCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGAAAGTTTTGGGTTTCTaGGTTGTCCATGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTKVLGF*VVHVCA
Trigger: TGCACAAACATGGACAACCCAGAAACCCAAAACTTT...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR GCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTAAGAAATACACAAAGTaGAGCTTTACTGACCATACA +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFKKYTK*SFTDHT
Trigger: TGTATGGTCAGTAAAGCTGCACTTTGTGTATTTCTT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGCACACACCTTCAGTGTaGTGTATTCCTTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTHTPSV*CIPCLK
Trigger: TTTTAAACAAGGAATACACCACACTGAAGGTGTGTG...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CCA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTACACTTAAACGCCATTaGCATATGAAGTTGTTTACA +
Preference number: 4 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFTLKRH*HMKLFT
Trigger: TGTAAACAACTTCATATGCCAATGGCGTTTAAGTGT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS CCA 90 bp GCCTCTGGTGTCAGGGCGTCCATGAGGCCCACTGGGCACCCACCATaGGTTTCTCCCAGTGGCCTGCATGGGTGGCTGCTGCATGACCAG +
Preference number: 5 (lower is better)
Translates to: ASGVRASMRPTGHPP*VSPSGLHGWLLHDQ
Trigger: CTGGTCATGCAGCAGCCACCCATGCAGGCCACTGGGAGAAACCCATGGTGGGTGCCCAGTGGGCCTCATGGACGCCCTGACACCAGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS CCA 90 bp TACACCCCCTTCCGCCTCTGGTGTCAGGGCGTCCATGAGGCCCACTaGGCACCCACCATGGGTTTCTCCCAGTGGCCTGCATGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: YTPFRLWCQGVHEAH*APTMGFSQWPAWVA
Trigger: AGCCACCCATGCAGGCCACTGGGAGAAACCCATGGTGGGTGCCCAGTGGGCCTCATGGACGCCCTGACACCAGAGGCGGAAGGGGGTGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS-3UTR CAA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCAGCCCTGAGTGCCGCTaGCTGCTTGGCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: RWRASASAIHRSSTGLIFSPECR*LLGSMA
Trigger: GGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCT...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGAGCCCTGAGTGCCGCTaGCTGCTTGGCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: VLHTCSMAGLSLSHPPLKSPECR*LLGSMA
Trigger: GGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCT...CTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATAGTGCCGCTTGCTGCTaGGCTCGATGGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDSAACC*ARWPWI
Trigger: AATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACT...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCAGTGCCGCTTGCTGCTaGGCTCGATGGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: RWRASASAIHRSSTGLIFSAACC*ARWPWI
Trigger: AATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACT...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCATCTGCTGGCCGGGCTaGATGGGTGACAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: RWRASASAIHRSSTGLIFICWPG*MGDSVM
Trigger: CATCACGCTGTCACCCATCAAGCCCGGCCAGCAGAT...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416452.1
CDS TCA 90 bp ATCCAGAAAATACACCCCCTTCCGCCTCTGGTGTCAGGGCGTCCATaGGGCCCACTGGGCACCCACCATGGGTTTCTCCCAGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: IQKIHPLPPLVSGRP*GPLGTHHGFLPVAC
Trigger: GCAGGCCACTGGGAGAAACCCATGGTGGGTGCCCAGTGGGCCTCATGGACGCCCTGACACCAGAGGCGGAAGGGGGTGTATTTTCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS-3UTR CAA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGGGTTGCGGGTGCTGGTaGGTTGACGGGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVGCGCW*VDGGGC
Trigger: GCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACC...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: RWRASASAIHRSSTGLIFRPGFS*AVRLLA
Trigger: AGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCT...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CAA 90 bp CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCCGCCGCTTGCGCTTTTaGGATGGTTCACTCCCGATA +
Preference number: 5 (lower is better)
Translates to: RWRASASAIHRSSTGLIFRRLRF*DGSLPI
Trigger: TATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCG...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS CCA 90 bp TTGAGGATCTGCTGGCCGGGCTTGATGGGTGACAGCGTGATGCCCTaGGTGTTGATCACGGGCAGGATCTGGTTCCCAATGACTGTGGCG +
Preference number: 5 (lower is better)
Translates to: LRICWPGLMGDSVMP*VLITGRIWFPMTVA
Trigger: CGCCACAGTCATTGGGAACCAGATCCTGCCCGTGATCAACACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGCCAGCAGATCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416452.1
CDS-3UTR CAA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATTGTCCTCGCTGTCATTaGATTCCACAGGCGCAAGCA +
Preference number: 5 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDCPRCH*IPQAQA
Trigger: TGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACA...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp CTGCATGGGTGGCTGCTGCATGACCAGGTACAGAGGTCACTCCTCTaGTGCTATTCAGCTCCTCTGGGCCACAGTCCTTCCCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: LHGWLLHDQVQRSLL*CYSAPLGHSPSHCS
Trigger: GGAGCAGTGGGAAGGACTGTGGCCCAGAGGAGCTGAATAGCATCAGAGGAGTGACCTCTGTACCTGGTCATGCAGCAGCCACCCATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGGGTTGCGGGTGCTGGTaGGTTGACGGGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: NSEPHRMASTMVPTPWVEGCGCW*VDGGGC
Trigger: GCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACC...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATGGGCTGAGGCGCCTGTaGCAGCTGAGATGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYGLRRL*QLRCRS
Trigger: GCTCCTACATCTCAGCTGCAACAGGCGCCTCAGCCC...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCTGGGTTGGAGATGGTaGGTTCTGGTTCTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: NSVRFCIPARWRASASAILGWRW*VLVLGV
Trigger: CACTCCCAGAACCAGAACCAACCATCTCCAACCCAG...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCAAGGAGGTGCGCCGCTaGCGCTTTTTGGATGGTTCA +
Preference number: 5 (lower is better)
Translates to: NSVRFCIPARWRASASAIKEVRR*RFLDGS
Trigger: TGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTT...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTTGTTGTTGTTGTTGTaGTGGAGTCCCAAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAALLLLL*WSPKGG
Trigger: TCCACCCTTGGGACTCCACAACAACAACAACAACAA...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACCTTTACGAGTGACTaGTTCCACTTCCAGGATTCC +
Preference number: 5 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAATFTSD*FHFQDS
Trigger: GGAATCCTGGAAGTGGAACAAGTCACTCGTAAAGGT...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp CCCACCATGGGTTTCTCCCAGTGGCCTGCATGGGTGGCTGCTGCATaGCCAGGTACAGAGGTCACTCCTCTGATGCTATTCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PTMGFSQWPAWVAAA*PGTEVTPLMLFSSS
Trigger: AGAGGAGCTGAATAGCATCAGAGGAGTGACCTCTGTACCTGGTCATGCAGCAGCCACCCATGCAGGCCACTGGGAGAAACCCATGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCAGCTGTCCCGCCATGTaGAAGGGAATGAGGATTGGC +
Preference number: 5 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCSCPAM*KGMRIG
Trigger: GCCAATCCTCATTCCCTTCAACATGGCGGGACAGCT...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGCGGGTGCTGGTTGGTaGACGGGGGAGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PAFQTWQDTKGQGSVWLSAGAGW*TGEAAA
Trigger: AGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGC...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCAGACTGGAGAGGGCATaGCCAAAGGCCTGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCRLERA*PKACEL
Trigger: AAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCT...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCAGCCCTGAGTGCCGCTaGCTGCTTGGCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCSPECR*LLGSMA
Trigger: GGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCT...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGGGTGATTGGCTGCACTaGCAAGCCCTGAGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVGDWLH*QALSAA
Trigger: AGCGGCACTCAGGGCTTGCAAGTGCAGCCAATCACC...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp CAGCTCCAGTCCACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCTTCTCACTAGG +
Preference number: 5 (lower is better)
Translates to: QLQSTAPSVSDAEDG*FLHFHLRYRVLLTR
Trigger: CCTAGTGAGAAGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTGGACTGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517348.1
CDS-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCTGAAGTAGCAGCCTaGTCCTCACCTCTCAACTCC +
Preference number: 5 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCSEVAA*SSPLNS
Trigger: GGAGTTGAGAGGTGAGGACAAGGCTGCTACTTCAGA...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGCTGACTGGCCTGGTGTaGGTCAGGAGTGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: NSEPHRMASTMVPTPWVELTGLV*VRSAWV
Trigger: GACCCAGGCACTCCTGACCAACACCAGGCCAGTCAG...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATTGCTGCCACCAGCCCTaGGATGTTGGTGAGATTCGC +
Preference number: 5 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYCCHQP*DVGEIR
Trigger: GCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCA...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACGGTTGCGGGTGCTGGTaGGTTGACGGGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYGCGCW*VDGGGC
Trigger: GCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACC...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMAVMPWV*ITGRIW
Trigger: CCAGATCCTGCCCGTGATCAACACCCAGGGCATCAC...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CAA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGAGCTGCTGGCCGGGCTaGATGGGTGACAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQSCWPG*MGDSVM
Trigger: CATCACGCTGTCACCCATCAAGCCCGGCCAGCAGCT...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGAGCTGCTGGCCGGGCTaGATGGGTGACAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: NSEPHRMASTMVPTPWVESCWPG*MGDSVM
Trigger: CATCACGCTGTCACCCATCAAGCCCGGCCAGCAGCT...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTATTTTGTTGTTGTTGTaGTTGTGGAGTCCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAAILLLL*LWSPKG
Trigger: ACCCTTGGGACTCCACAACAACAACAACAACAAAAT...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGACCTTTACGAGTGACTaGTTCCACTTCCAGGATTCC +
Preference number: 5 (lower is better)
Translates to: VLHTCSMAGLSLSHPPLKTFTSD*FHFQDS
Trigger: GGAATCCTGGAAGTGGAACAAGTCACTCGTAAAGGT...CTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCCTAGCCCCGAAGAGCTaGCTGGGAGTGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KGTAVAGSCCFKRLIVFFLAPKS*LGVSSL
Trigger: CAGCGAGGACACTCCCAGCAAGCTCTTCGGGGCTAG...GAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTGGGCTGAGGCGCCTGTaGCAGCTGAGATGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVGLRRL*QLRCRS
Trigger: GCTCCTACATCTCAGCTGCAACAGGCGCCTCAGCCC...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTGGGCTGAGGCGCCTGTaGCAGCTGAGATGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISGLRRL*QLRCRS
Trigger: GCTCCTACATCTCAGCTGCAACAGGCGCCTCAGCCC...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGGGTGATTGGCTGCACTaGCAAGCCCTGAGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQGDWLH*QALSAA
Trigger: AGCGGCACTCAGGGCTTGCAAGTGCAGCCAATCACC...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CAA 90 bp CACCAGCCCTTGGATGTTGGTGAGATTCGCTGTTGGCAGTGTGAGAACCAGTCCTTGAGACATGGATGCTaGGCTGTGAGCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: HQPLDVGEIRCWQCENQSLRHGC*AVSQVQ
Trigger: CTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAA...GGACTGGTTCTCACACTGCCAACAGCGAATCTCACCAACATCCAAGGGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CAGCACTTAGTACCTGAAGGGGTGCAGTCCTTCCTCCAGGTGGCAGGCTTGTATCGCCGCTTGCGCTTTTaGGATGGTTCACTCCCGATA +
Preference number: 5 (lower is better)
Translates to: QHLVPEGVQSFLQVAGLYRRLRF*DGSLPI
Trigger: TATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCG...ATACAAGCCTGCCACCTGGAGGAAGGACTGCACCCCTTCAGGTACTAAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCTGTGTTCTTCAGGGCTaGCCTCTTATTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: NSVRFCIPARWRASASAICVLQG*PLIAEP
Trigger: TGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACA...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGTGCTGGTTGGTTGACGGGGGAGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTCTAGTTCTCATATaGCAGGCTATTCTGATTGTT +
Preference number: 5 (lower is better)
Translates to: GAGWLTGEAAAAAAAAAAPLVLI*QAILIV
Trigger: AACAATCAGAATAGCCTGCAATATGAGAACTAGAGG...AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCCCCCGTCAACCAACCAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCATGTTTGTGCAGTTTTaGAGGTGGCGAAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCMFVQF*RWRKGL
Trigger: GAGCCCCTTTCGCCACCTCAAAAACTGCACAAACAT...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTCTAGCCCCGAAGAGCTaGCTGGGAGTGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPLAPKS*LGVSSL
Trigger: CAGCGAGGACACTCCCAGCAAGCTCTTCGGGGCTAG...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTCTGACTGGCCTGGTGTaGGTCAGGAGTGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPLTGLV*VRSAWV
Trigger: GACCCAGGCACTCCTGACCAACACCAGGCCAGTCAG...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCAGCTGTCCCGCCATGTaGAAGGGAATGAGGATTGGC +
Preference number: 5 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACSCPAM*KGMRIG
Trigger: GCCAATCCTCATTCCCTTCAACATGGCGGGACAGCT...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTGCTGCCACCAGCCCTaGGATGTTGGTGAGATTCGC +
Preference number: 5 (lower is better)
Translates to: KPGRIQKARVQFGCQTASCCHQP*DVGEIR
Trigger: GCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCA...GCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGGCGGGTGCTGGTTGGTaGACGGGGGAGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLAGAGW*TGEAAA
Trigger: AGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGC...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: AGYKRPGFSLAVRLLAIVVMPWV*ITGRIW
Trigger: CCAGATCCTGCCCGTGATCAACACCCAGGGCATCAC...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCAGCTGCTGGCCGGGCTaGATGGGTGACAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: VWTVSTITAYASVDSSSSSCWPG*MGDSVM
Trigger: CATCACGCTGTCACCCATCAAGCCCGGCCAGCAGCT...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGGTGCAGAAGGTTGCCTaGGGAGGCTGCTTGACCCAC +
Preference number: 5 (lower is better)
Translates to: AGYKRPGFSLAVRLLAIVVQKVA*GGCLTH
Trigger: GTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCAC...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCCTGCCGGACGGGACTTaGAGACATGGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCLPDGT*RHGCLA
Trigger: AGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAG...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCTTGTTGTTGTTGTTGTaGTGGAGTCCCAAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTLLLLL*WSPKGG
Trigger: TCCACCCTTGGGACTCCACAACAACAACAACAACAA...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCCAGCTTATGCCAGTGTaGACAGTTCATCGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCQLMPV*TVHRAK
Trigger: CTTTGCTCGATGAACTGTCAACACTGGCATAAGCTG...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATAATCAGTTGGGCAACTaGAGATTGGGTTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDNQLGN*RLGFSF
Trigger: AAAAGAGAAACCCAATCTCAAGTTGCCCAACTGATT...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGAACACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCGAGAAGCAGATCTCTTaGTGGTGCCTCATAAGTGAC +
Preference number: 5 (lower is better)
Translates to: GTPSACTWVKTPVAAAKCEKQIS*WCLISD
Trigger: GTCACTTATGAGGCACCACAAAGAGATCTGCTTCTC...GCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCGCTTTTTGGATGGTTCACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCCTGACCAATTACAGCTaGCATGGTCCCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: ALFGWFTPDKLGQVLHTCLTNYS*HGPRVL
Trigger: CAGGACACGGGGACCATGCAAGCTGTAATTGGTCAG...GCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGTGAACCATCCAAAAAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCGGTGATTGGCTGCACTaGCAAGCCCTGAGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: VWTVSTITAYASVDSSSSGDWLH*QALSAA
Trigger: AGCGGCACTCAGGGCTTGCAAGTGCAGCCAATCACC...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTCTGCCGGACGGGACTTaGAGACATGGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISLPDGT*RHGCLA
Trigger: AGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAG...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLRPGFS*AVRLLA
Trigger: AGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCT...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CAA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGAGACGAACGATCGCGTaGCAATGCCATGTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVRRTIA*QCHVSD
Trigger: GTCAGAAACATGGCATTGCAACGCGATCGTTCGTCT...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCATCCCAACATGTCCTaGCTTATTAGGTTATTGTGG +
Preference number: 5 (lower is better)
Translates to: NSVRFCIPARWRASASAIHPNMS*LIRLLW
Trigger: CCACAATAACCTAATAAGCAAGGACATGTTGGGATG...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGGTTCTCTCTTTTGTGTaGTATGTGTATGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VLHTCSMAGLSLSHPPLKVLSFV*YVYVCV
Trigger: CACACACACATACACATACAACACAAAAGAGAGAAC...CTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATTTTAGTATTGCGAGATaGTCAGCAACATTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDFSIAR*SATFSH
Trigger: ATGGCTAAATGTTGCTGACAATCTCGCAATACTAAA...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCAGATAAAATCAGCTTaGGTTTCAATGTCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: CSMAGLSLSHPPLKHRLDQIKSA*VSMSEQ
Trigger: TTGCTCTGACATTGAAACCAAAGCTGATTTTATCTG...ATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp GTTGAGTCTGAAAGGAGCTGCTCTTCCTTGCCATACCTCACACGGTaGCAAATGCTGAGTGCTGACTTTGTGCTGGGCTGGTACACACTG +
Preference number: 5 (lower is better)
Translates to: VESERSCSSLPYLTR*QMLSADFVLGWYTL
Trigger: CAGTGTGTACCAGCCCAGCACAAAGTCAGCACTCAGCATTTGTCACCGTGTGAGGTATGGCAAGGAAGAGCAGCTCCTTTCAGACTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464276.2
CDS-3UTR CAA 90 bp CTGTTAAGGGCTCCAAAGGGACTGCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTAAGAAGAGCACTCATTaGCCACTTCCTCTTGGATCA +
Preference number: 5 (lower is better)
Translates to: LLRAPKGLPWPARAVLSVKKSTH*PLPLGS
Trigger: TGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCTT...AACGCTTAAAACAGCACGAGCCGGCCACGGCAGTCCCTTTGGAGCCCTTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATAGTGAGCCTCACAGAATGGCTTCAACAATGGTACCCACCCCATGGGTGGAGTGTCCTCGCTGTCATTaGATTCCACAGGCGCAAGCA +
Preference number: 5 (lower is better)
Translates to: NSEPHRMASTMVPTPWVECPRCH*IPQAQA
Trigger: TGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACA...CTCCACCCATGGGGTGGGTACCATTGTTGAAGCCATTCTGTGAGGCTCACTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCTAGCCCCGAAGAGCTaGCTGGGAGTGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLAPKS*LGVSSL
Trigger: CAGCGAGGACACTCCCAGCAAGCTCTTCGGGGCTAG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGCGGGTGCTGGTTGGTaGACGGGGGAGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFAGAGW*TGEAAA
Trigger: AGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGGTTGCGGGTGCTGGTaGGTTGACGGGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNGCGCW*VDGGGC
Trigger: GCAGCCTCCCCCGTCAACCAACCAGCACCCGCAACC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTAAGGAGGTGCGCCGCTaGCGCTTTTTGGATGGTTCA +
Preference number: 5 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVKEVRR*RFLDGS
Trigger: TGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTT...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCCGCAGGGAGCTTTTCTaGATGGAATTTGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: ASCGRKKWLLRMVCLQMARRELF*MEFGAG
Trigger: ACCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCG...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCAGTGGCTTTTATTTTTaGTGGGTGGCAACCTTAACC +
Preference number: 5 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSSGFYF*WVATLT
Trigger: GGTTAAGGTTGCCACCCACAAAAAATAAAAGCCACT...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp CTGCTCTTCCTTGCCATACCTCACACGGTGACAAATGCTGAGTGCTaGCTTTGTGCTGGGCTGGTACACACTGGTTCCACTTTAGGAACA +
Preference number: 5 (lower is better)
Translates to: LLFLAIPHTVTNAEC*LCAGLVHTGSTLGT
Trigger: TGTTCCTAAAGTGGAACCAGTGTGTACCAGCCCAGCACAAAGTCAGCACTCAGCATTTGTCACCGTGTGAGGTATGGCAAGGAAGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464276.2
CDS-3UTR CAA 90 bp CCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACCTTGTCCAGCTATCATaGGATCCTGAAGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: PHLSTPHSFHSALTARAYLVQLS*DPEEEH
Trigger: GTGCTCTTCTTCAGGATCCAATGATAGCTGGACAAG...GTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGCAAGGGCTTACTGACTaGTCCAGCTATCATTGGATC +
Preference number: 5 (lower is better)
Translates to: CGRKKWLLRMVCLQMADWQGLTD*SSYHWI
Trigger: GATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTG...CCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTATCTGAAGTAGCAGCCTaGTCCTCACCTCTCAACTCC +
Preference number: 5 (lower is better)
Translates to: SNLAGYKRPGFSLAVRLLSEVAA*SSPLNS
Trigger: GGAGTTGAGAGGTGAGGACAAGGCTGCTACTTCAGA...TAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCTAGCCCCGAAGAGCTaGCTGGGAGTGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFLAPKS*LGVSSL
Trigger: CAGCGAGGACACTCCCAGCAAGCTCTTCGGGGCTAG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTGCGGGTGCTGGTTGGTaGACGGGGGAGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: NMYISTASKLTALFCLLLAGAGW*TGEAAA
Trigger: AGCAGCAGCCTCCCCCGTCAACCAACCAGCACCCGC...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGGGCTGAGGCGCCTGTaGCAGCTGAGATGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASGLRRL*QLRCRS
Trigger: GCTCCTACATCTCAGCTGCAACAGGCGCCTCAGCCC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGTGGAGCTCTGCTGGGTaGGAGATGGTTGGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLWSSAG*EMVGSG
Trigger: ACCAGAACCAACCATCTCCAACCCAGCAGAGCTCCA...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATAGTGCCGCTTGCTGCTaGGCTCGATGGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: SVDSSSSKALVILESLLHSAACC*ARWPWI
Trigger: AATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACT...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATAGCCCTGAGTGCCGCTaGCTGCTTGGCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNSPECR*LLGSMA
Trigger: GGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCT...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTAGCCCTGAGTGCCGCTaGCTGCTTGGCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFSPECR*LLGSMA
Trigger: GGCCATCGAGCCAAGCAGCAAGCGGCACTCAGGGCT...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCATTCAGTTTGGCTTCTaGGTCACAAGTCTATCATGT +
Preference number: 5 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSIQFGF*VTSLSC
Trigger: ACATGATAGACTTGTGACCAAGAAGCCAAACTGAAT...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp AGCCTTGTCCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGACTTGTCCAGCTATCATTGGATCAGT +
Preference number: 5 (lower is better)
Translates to: SLVLTSQLRIHFTPH*QQGLTDLSSYHWIS
Trigger: ACTGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGGACAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451021.5
CDS TCA 90 bp AGCCTTGTCCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGACTTGTCCAGCTATCATTGGATCCTA +
Preference number: 5 (lower is better)
Translates to: SLVLTSQLRIHFTPH*QQGLTDLSSYHWIL
Trigger: TAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGGACAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517348.1
ENST00000673818.5
CDS TCA 90 bp AGCCTTGTCCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGACTTGTCCAGCTATCATTGGATCCTT +
Preference number: 5 (lower is better)
Translates to: SLVLTSQLRIHFTPH*QQGLTDLSSYHWIL
Trigger: AAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGGACAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524147.5
CDS-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACTGTCCTCGCTGTCATTaGATTCCACAGGCGCAAGCA +
Preference number: 5 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYCPRCH*IPQAQA
Trigger: TGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACA...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCTGACTGGCCTGGTGTaGGTCAGGAGTGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYLTGLV*VRSAWV
Trigger: GACCCAGGCACTCCTGACCAACACCAGGCCAGTCAG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCAGTGCCGCTTGCTGCTaGGCTCGATGGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFSAACC*ARWPWI
Trigger: AATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGAGTGCCGCTTGCTGCTaGGCTCGATGGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKSAACC*ARWPWI
Trigger: AATCCAGGGCCATCGAGCCAAGCAGCAAGCGGCACT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGGTGATTGGCTGCACTaGCAAGCCCTGAGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASGDWLH*QALSAA
Trigger: AGCGGCACTCAGGGCTTGCAAGTGCAGCCAATCACC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASVMPWV*ITGRIW
Trigger: CCAGATCCTGCCCGTGATCAACACCCAGGGCATCAC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATAGCTGCTGGCCGGGCTaGATGGGTGACAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYSCWPG*MGDSVM
Trigger: CATCACGCTGTCACCCATCAAGCCCGGCCAGCAGCT...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATGTGCAGAAGGTTGCCTaGGGAGGCTGCTTGACCCAC +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDVQKVA*GGCLTH
Trigger: GTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCAC...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCAGGGCTTGCCTCTTATaGCAGAACCAAACTCTAACT +
Preference number: 5 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACRACLL*QNQTLT
Trigger: AGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCT...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTGTGTTCTTCAGGGCTaGCCTCTTATTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: KPGRIQKARVQFGCQTASCVLQG*PLIAEP
Trigger: TGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACA...GCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416452.1
ENST00000673891.1
CDS-3UTR CAA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGATTTTGTTGTTGTTGTaGTTGTGGAGTCCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVILLLL*LWSPKG
Trigger: ACCCTTGGGACTCCACAACAACAACAACAACAAAAT...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp ACTCCCGATAAACTCGGTCAGGTTCTGCATACCTGCTCGATGGCGGGCCTCAGCGCAATCCATCATATGTaGTCTTTGAAAAGGAGAATG +
Preference number: 5 (lower is better)
Translates to: TPDKLGQVLHTCSMAGLSAIHHM*SLKRRM
Trigger: CATTCTCCTTTTCAAAGACAACATATGATGGATTGC...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAACCTGACCGAGTTTATCGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp ACCGTCTGCCTGTACCTGGGTGAAAACACCAGTGGCAGCTGCCAAGTGCTCACCAACCATTCTGTCCACTaGGTAGTTTTCTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: TVCLYLGENTSGSCQVLTNHSVH*VVFLVI
Trigger: AATGACTAAGAAAACTACCAAGTGGACAGAATGGTT...GGTGAGCACTTGGCAGCTGCCACTGGTGTTTTCACCCAGGTACAGGCAGACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGAAAGCCCTAGTTATTTaGGAGTCTCTCCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVKALVI*ESLLHF
Trigger: GAAATGCAGGAGAGACTCCAAAATAACTAGGGCTTT...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCGGCCCCCAATTCCAGTaGTTTAAATTTGCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: VWTVSTITAYASVDSSSSGPQFQ*FKFARH
Trigger: GTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCC...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGGGCATTTCTAATCAGTaGGGCAACTTGAGATTGGGT +
Preference number: 5 (lower is better)
Translates to: CGRKKWLLRMVCLQMADWGISNQ*GNLRLG
Trigger: ACCCAATCTCAAGTTGCCCAACTGATTAGAAATGCC...CCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTGAGAAGCAGATCTCTTaGTGGTGCCTCATAAGTGAC +
Preference number: 5 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLEKQIS*WCLISD
Trigger: GTCACTTATGAGGCACCACAAAGAGATCTGCTTCTC...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp TCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTGGATCAGTCCATGCCATTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: STPHSFHSALTARAY*LVQLSLDQSMPLSP
Trigger: TGGAGACAATGGCATGGACTGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451021.5
CDS TCA 90 bp AGCCTTGTCCTCACCTCTCAACTCCGCATTCATTTCACTCCGCACTaGCAGCAAGGGCTTACTGACTTGTCCAGCTATCATTGGATCAAA +
Preference number: 5 (lower is better)
Translates to: SLVLTSQLRIHFTPH*QQGLTDLSSYHWIK
Trigger: TTTGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGAGAGGTGAGGACAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520104.5
CDS TCA 90 bp TCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTGGATCCTAGGATGGGCGAAAAGAGT +
Preference number: 5 (lower is better)
Translates to: STPHSFHSALTARAY*LVQLSLDPRMGEKS
Trigger: ACTCTTTTCGCCCATCCTAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673818.5
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCTGACCAATTACAGCTaGCATGGTCCCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLTNYS*HGPRVL
Trigger: CAGGACACGGGGACCATGCAAGCTGTAATTGGTCAG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGACCAGCCCTTGGATGTaGGTGAGATTCGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLTSPWM*VRFAVG
Trigger: GCCAACAGCGAATCTCACCAACATCCAAGGGCTGGT...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTGGAGCTCTGCTGGGTaGGAGATGGTTGGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGWSSAG*EMVGSG
Trigger: ACCAGAACCAACCATCTCCAACCCAGCAGAGCTCCA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGGTGATTGGCTGCACTaGCAAGCCCTGAGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNGDWLH*QALSAA
Trigger: AGCGGCACTCAGGGCTTGCAAGTGCAGCCAATCACC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYVMPWV*ITGRIW
Trigger: CCAGATCCTGCCCGTGATCAACACCCAGGGCATCAC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTGTGCAGAAGGTTGCCTaGGGAGGCTGCTTGACCCAC +
Preference number: 5 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFVQKVA*GGCLTH
Trigger: GTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCAC...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATCTGCCGGACGGGACTTaGAGACATGGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDLPDGT*RHGCLA
Trigger: AGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAG...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGCTGCCGGACGGGACTTaGAGACATGGATGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKLPDGT*RHGCLA
Trigger: AGCCAAGCATCCATGTCTCAAAGTCCCGTCCGGCAG...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCGCCGCTTGCGCTTTTaGGATGGTTCACTCCCGATA +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGRRLRF*DGSLPI
Trigger: TATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCCGTGGCCGGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCTCTGTGATGTTGGCATaGAAGATCAAGTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: AVAGSCCFKRLIVFFRACSVMLA*KIKLAV
Trigger: CACAGCTAACTTGATCTTCAATGCCAACATCACAGA...GCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCCGGCCACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp TCAACTCCGCATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTGGATCCTGACCAATTACAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: STPHSFHSALTARAY*LVQLSLDPDQLQLA
Trigger: TGCAAGCTGTAATTGGTCAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATGCGGAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518318.7
CDS TCA 90 bp TGCCTGACCAATTACAGCTTGCATGGTCCCCGTGTCCTGCTGCGCTaGGAGATAGCAATCCATCATATGTTGTCTTTGAAAAGGAGAATG +
Preference number: 5 (lower is better)
Translates to: CLTNYSLHGPRVLLR*EIAIHHMLSLKRRM
Trigger: CATTCTCCTTTTCAAAGACAACATATGATGGATTGCTATCTCTCAGCGCAGCAGGACACGGGGACCATGCAAGCTGTAATTGGTCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCCTTGTCCAGCTATCATaGGATCCTGAAGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: VWTVSTITAYASVDSSSSLVQLS*DPEEEH
Trigger: GTGCTCTTCTTCAGGATCCAATGATAGCTGGACAAG...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGACTGACTGGCCTGGTGTaGGTCAGGAGTGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRLTGLV*VRSAWV
Trigger: GACCCAGGCACTCCTGACCAACACCAGGCCAGTCAG...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCAGCTGTCCCGCCATGTaGAAGGGAATGAGGATTGGC +
Preference number: 5 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFSCPAM*KGMRIG
Trigger: GCCAATCCTCATTCCCTTCAACATGGCGGGACAGCT...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATTGCTGCCACCAGCCCTaGGATGTTGGTGAGATTCGC +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYCCHQP*DVGEIR
Trigger: GCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCA...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCCTGGGTTGGAGATGGTaGGTTCTGGTTCTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFLGWRW*VLVLGV
Trigger: CACTCCCAGAACCAGAACCAACCATCTCCAACCCAG...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCAGACTGGAGAGGGCATaGCCAAAGGCCTGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFRLERA*PKACEL
Trigger: AAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCT...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTGTGCAGAAGGTTGCCTaGGGAGGCTGCTTGACCCAC +
Preference number: 5 (lower is better)
Translates to: NMYISTASKLTALFCLLLVQKVA*GGCLTH
Trigger: GTGGGTCAAGCAGCCTCCCAAGGCAACCTTCTGCAC...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTTGAGACATGGATGCTaGGCTGTGAGCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFLRHGC*AVSQVQ
Trigger: CTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAA...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDRPGFS*AVRLLA
Trigger: AGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATCGCCGCTTGCGCTTTTaGGATGGTTCACTCCCGATA +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDRRLRF*DGSLPI
Trigger: TATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCG...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTAAGGAGGTGCGCCGCTaGCGCTTTTTGGATGGTTCA +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASKEVRR*RFLDGS
Trigger: TGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCCTGCATTTCACTAGGATCTGAGTGGAAAAGACACTGCTTCTCCCCACTTCTGTGTGTTCTTCAGGGCTaGCCTCTTATTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SCISLGSEWKRHCFSPLLCVLQG*PLIAEP
Trigger: TGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACA...CAGAAGTGGGGAGAAGCAGTGTCTTTTCCACTCAGATCCTAGTGAAATGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGGGGGAGACAGGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGGCAATCCATCATATGTaGTCTTTGAAAAGGAGAATG +
Preference number: 5 (lower is better)
Translates to: FGGDRWGKGTILPHTPSVAIHHM*SLKRRM
Trigger: CATTCTCCTTTTCAAAGACAACATATGATGGATTGC...CACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACCTGTCTCCCCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTAAAGCAACAAATGCTTaGGCACACGATCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPKATNA*AHDPGC
Trigger: GCATCCTGGATCGTGTGCCAAAGCATTTGTTGCTTT...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGAAAGCCCTAGTTATTTaGGAGTCTCTCCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: SWASCGRKKWLLRMVCLQKALVI*ESLLHF
Trigger: GAAATGCAGGAGAGACTCCAAAATAACTAGGGCTTT...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673891.1
CDS-3UTR CAA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTAAAGCCCTAGTTATTTaGGAGTCTCTCCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLKALVI*ESLLHF
Trigger: GAAATGCAGGAGAGACTCCAAAATAACTAGGGCTTT...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGTGGGGGAAGGGAACTATCCTACCACACACACCTTCAGTGTGGTGTATTCCTTTTGCTGCATGAATCATaGGAGGGGACAATTATACTG +
Preference number: 5 (lower is better)
Translates to: GGGRELSYHTHLQCGVFLLLHES*EGTIIL
Trigger: CAGTATAATTGTCCCCTCCAATGATTCATGCAGCAA...AAGGAATACACCACACTGAAGGTGTGTGTGGTAGGATAGTTCCCTTCCCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp ATCCTGACCAATTACAGCTTGCATGGTCCCCGTGTCCTGCTGCGCTaGGAGATAGCAATCCATCATATGTTGTCTTTGAAAAGGAGAATG +
Preference number: 5 (lower is better)
Translates to: ILTNYSLHGPRVLLR*EIAIHHMLSLKRRM
Trigger: CATTCTCCTTTTCAAAGACAACATATGATGGATTGCTATCTCTCAGCGCAGCAGGACACGGGGACCATGCAAGCTGTAATTGGTCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518318.7
CDS-3UTR CAA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTCTGACCAATTACAGCTaGCATGGTCCCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFLTNYS*HGPRVL
Trigger: CAGGACACGGGGACCATGCAAGCTGTAATTGGTCAG...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTCTGAAGTAGCAGCCTaGTCCTCACCTCTCAACTCC +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDSEVAA*SSPLNS
Trigger: GGAGTTGAGAGGTGAGGACAAGGCTGCTACTTCAGA...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATACCAGCCCTTGGATGTaGGTGAGATTCGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYTSPWM*VRFAVG
Trigger: GCCAACAGCGAATCTCACCAACATCCAAGGGCTGGT...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCAGAACCAAACTTGCTGCCACCAGCCCTaGGATGTTGGTGAGATTCGC +
Preference number: 5 (lower is better)
Translates to: FKRLIVFFRACLLLQNQTCCHQP*DVGEIR
Trigger: GCGAATCTCACCAACATCCAAGGGCTGGTGGCAGCA...AGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTAGACTGGAGAGGGCATaGCCAAAGGCCTGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFRLERA*PKACEL
Trigger: AAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCT...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCAGACTGGAGAGGGCATaGCCAAAGGCCTGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSRLERA*PKACEL
Trigger: AAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCTTGAGACATGGATGCTaGGCTGTGAGCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSLRHGC*AVSQVQ
Trigger: CTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAA...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATAAGGAGGTGCGCCGCTaGCGCTTTTTGGATGGTTCA +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYKEVRR*RFLDGS
Trigger: TGAACCATCCAAAAAGCGCAAGCGGCGCACCTCCTT...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGGCCCCCAATTCCAGTaGTTTAAATTTGCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASGPQFQ*FKFARH
Trigger: GTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCC...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTTTGCTGCATGAATCATaGGAGGGGACAATTATACTG +
Preference number: 5 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISLLHES*EGTIIL
Trigger: CAGTATAATTGTCCCCTCCAATGATTCATGCAGCAA...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTTCTGTGATGTTGGCATaGAAGATCAAGTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISSVMLA*KIKLAV
Trigger: CACAGCTAACTTGATCTTCAATGCCAACATCACAGA...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGATGTTTGTGCAGTTTTaGAGGTGGCGAAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGMFVQF*RWRKGL
Trigger: GAGCCCCTTTCGCCACCTCAAAAACTGCACAAACAT...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATCAAGGGCTTACTGACTaGTCCAGCTATCATTGGATC +
Preference number: 5 (lower is better)
Translates to: SVDSSSSKALVILESLLHQGLTD*SSYHWI
Trigger: GATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTG...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTGTCCTCGCTGTCATTaGATTCCACAGGCGCAAGCA +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNCPRCH*IPQAQA
Trigger: TGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACA...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTAGCTGTCCCGCCATGTaGAAGGGAATGAGGATTGGC +
Preference number: 5 (lower is better)
Translates to: NMYISTASKLTALFCLLLSCPAM*KGMRIG
Trigger: GCCAATCCTCATTCCCTTCAACATGGCGGGACAGCT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCACTGGGTTGGAGATGGTaGGTTCTGGTTCTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESLGWRW*VLVLGV
Trigger: CACTCCCAGAACCAGAACCAACCATCTCCAACCCAG...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTVMPWV*ITGRIW
Trigger: CCAGATCCTGCCCGTGATCAACACCCAGGGCATCAC...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATTTGTTGTTGTTGTTGTaGTGGAGTCCCAAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SVDSSSSKALVILESLLHLLLLL*WSPKGG
Trigger: TCCACCCTTGGGACTCCACAACAACAACAACAACAA...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGCAGCTTATGCCAGTGTaGACAGTTCATCGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGQLMPV*TVHRAK
Trigger: CTTTGCTCGATGAACTGTCAACACTGGCATAAGCTG...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGGCCCCCAATTCCAGTaGTTTAAATTTGCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFGPQFQ*FKFARH
Trigger: GTGGCGGGCAAATTTAAACAACTGGAATTGGGGGCC...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGGTTGTCCATGTTTGTGCAGTTTTTGAGGTGGCGAAAGGGGCTCTGTGATGTTCCTCTAGTTCTCATATaGCAGGCTATTCTGATTGTT +
Preference number: 5 (lower is better)
Translates to: GLSMFVQFLRWRKGLCDVPLVLI*QAILIV
Trigger: AACAATCAGAATAGCCTGCAATATGAGAACTAGAGG...AACATCACAGAGCCCCTTTCGCCACCTCAAAAACTGCACAAACATGGACAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACCATCCCAACATGTCCTaGCTTATTAGGTTATTGTGG +
Preference number: 5 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYHPNMS*LIRLLW
Trigger: CCACAATAACCTAATAAGCAAGGACATGTTGGGATG...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGATGTTTGTGCAGTTTTaGAGGTGGCGAAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRMFVQF*RWRKGL
Trigger: GAGCCCCTTTCGCCACCTCAAAAACTGCACAAACAT...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGACTGACCAATTACAGCTaGCATGGTCCCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRLTNYS*HGPRVL
Trigger: CAGGACACGGGGACCATGCAAGCTGTAATTGGTCAG...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCCAAGGGCTTACTGACTaGTCCAGCTATCATTGGATC +
Preference number: 5 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAQGLTD*SSYHWI
Trigger: GATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTG...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTACCAGCCCTTGGATGTaGGTGAGATTCGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFTSPWM*VRFAVG
Trigger: GCCAACAGCGAATCTCACCAACATCCAAGGGCTGGT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAACCAGCCCTTGGATGTaGGTGAGATTCGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRTSPWM*VRFAVG
Trigger: GCCAACAGCGAATCTCACCAACATCCAAGGGCTGGT...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCATGGAGCTCTGCTGGGTaGGAGATGGTTGGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: EILRHFFGYQTSERNCFAWSSAG*EMVGSG
Trigger: ACCAGAACCAACCATCTCCAACCCAGCAGAGCTCCA...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCAGACTGGAGAGGGCATaGCCAAAGGCCTGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: QFSIARLSATFSHIYTMCRLERA*PKACEL
Trigger: AAGCTCACAGGCCTTTGGCAATGCCCTCTCCAGTCT...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCTTGAGACATGGATGCTaGGCTGTGAGCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: QFSIARLSATFSHIYTMCLRHGC*AVSQVQ
Trigger: CTGCACCTGGCTCACAGCCAAGCATCCATGTCTCAA...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AGATTAACAGGATACACGATGGCCTTTAATGATCCAGTTGCTATCACTTTCTTTAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: RLTGYTMAFNDPVAITFFRPGFS*AVRLLA
Trigger: AGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCT...AAAGAAAGTGATAGCAACTGGATCATTAAAGGCCATCGTGTATCCTGTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518318.7
ENST00000673891.1
CDS-3UTR CAA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGACGCCGCTTGCGCTTTTaGGATGGTTCACTCCCGATA +
Preference number: 5 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRRRLRF*DGSLPI
Trigger: TATCGGGAGTGAACCATCCAAAAAGCGCAAGCGGCG...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGAGGGCTTGCCTCTTATaGCAGAACCAAACTCTAACT +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGRACLL*QNQTLT
Trigger: AGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCT...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTTGTGTTCTTCAGGGCTaGCCTCTTATTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASCVLQG*PLIAEP
Trigger: TGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACA...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTAGACGAACGATCGCGTaGCAATGCCATGTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFRRTIA*QCHVSD
Trigger: GTCAGAAACATGGCATTGCAACGCGATCGTTCGTCT...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGAAAGCAACAAATGCTTaGGCACACGATCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKKATNA*AHDPGC
Trigger: GCATCCTGGATCGTGTGCCAAAGCATTTGTTGCTTT...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCTCCAGTTGTTTAAATTaGCCCGCCACCTTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFSSCLN*PATFLL
Trigger: GAGCAGAAAGGTGGCGGGCAAATTTAAACAACTGGA...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATACCTTTACGAGTGACTaGTTCCACTTCCAGGATTCC +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDTFTSD*FHFQDS
Trigger: GGAATCCTGGAAGTGGAACAAGTCACTCGTAAAGGT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCGCAGGGAGCTTTTCTaGATGGAATTTGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNRRELF*MEFGAG
Trigger: ACCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AACTCAAACTCCCCAGGGAGAGGGAGTGTATTAGGGGAAGGAGATGGCATTTCTCAGATAAAATCAGCTTaGGTTTCAATGTCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: NSNSPGRGSVLGEGDGISQIKSA*VSMSEQ
Trigger: TTGCTCTGACATTGAAACCAAAGCTGATTTTATCTG...AGAAATGCCATCTCCTTCCCCTAATACACTCCCTCTCCCTGGGGAGTTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS CCA 90 bp AGCAATCCATCATATGTTGTCTTTGAAAAGGAGAATGGGGGTTTCTaGCATGCATCTGTCAATCAACTTCTGCACTCACAACCATCACCA +
Preference number: 5 (lower is better)
Translates to: SNPSYVVFEKENGGF*HASVNQLLHSQPSP
Trigger: TGGTGATGGTTGTGAGTGCAGAAGTTGATTGACAGATGCATGCCAGAAACCCCCATTCTCCTTTTCAAAGACAACATATGATGGATTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTCTTGTCCAGCTATCATaGGATCCTGAAGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFLVQLS*DPEEEH
Trigger: GTGCTCTTCTTCAGGATCCAATGATAGCTGGACAAG...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCAAGGGCTTACTGACTaGTCCAGCTATCATTGGATC +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYQGLTD*SSYHWI
Trigger: GATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCATCTGAAGTAGCAGCCTaGTCCTCACCTCTCAACTCC +
Preference number: 5 (lower is better)
Translates to: EILRHFFGYQTSERNCFASEVAA*SSPLNS
Trigger: GGAGTTGAGAGGTGAGGACAAGGCTGCTACTTCAGA...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGTGGAGCTCTGCTGGGTaGGAGATGGTTGGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTWSSAG*EMVGSG
Trigger: ACCAGAACCAACCATCTCCAACCCAGCAGAGCTCCA...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCTGTGTTCTTCAGGGCTaGCCTCTTATTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSCVLQG*PLIAEP
Trigger: TGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACACA...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATTTGTTGTTGTTGTTGTaGTGGAGTCCCAAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYLLLLL*WSPKGG
Trigger: TCCACCCTTGGGACTCCACAACAACAACAACAACAA...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp ATTGACAGCTCTCTTTTGCCTGCTCCTTTAATGGAACACCGTCTGCCTGTACCTAGGCTTGTATTCGCTTaGAACAGATCAAAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: IDSSLLPAPLMEHRLPVPRLVFA*NRSKFL
Trigger: CAAAAACTTTGATCTGTTCAAAGCGAATACAAGCCT...AGGTACAGGCAGACGGTGTTCCATTAAAGGAGCAGGCAAAAGAGAGCTGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACAGGCTTGTATTCGCTTaGAACAGATCAAAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYRLVFA*NRSKFL
Trigger: CAAAAACTTTGATCTGTTCAAAGCGAATACAAGCCT...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGTGGACAGTGAGCACAATTACAGCTTATGCCAGTGTTGACAGTTCATCGAGCAACCATTCTGTCCACTaGGTAGTTTTCTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: VWTVSTITAYASVDSSSSNHSVH*VVFLVI
Trigger: AATGACTAAGAAAACTACCAAGTGGACAGAATGGTT...GCTCGATGAACTGTCAACACTGGCATAAGCTGTAATTGTGCTCACTGTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTAGACGAACGATCGCGTaGCAATGCCATGTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: NMYISTASKLTALFCLLLRRTIA*QCHVSD
Trigger: GTCAGAAACATGGCATTGCAACGCGATCGTTCGTCT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATCAGCTTATGCCAGTGTaGACAGTTCATCGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYQLMPV*TVHRAK
Trigger: CTTTGCTCGATGAACTGTCAACACTGGCATAAGCTG...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGGGCATTTCTAATCAGTaGGGCAACTTGAGATTGGGT +
Preference number: 5 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRGISNQ*GNLRLG
Trigger: ACCCAATCTCAAGTTGCCCAACTGATTAGAAATGCC...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCGGCATTTCTAATCAGTaGGGCAACTTGAGATTGGGT +
Preference number: 5 (lower is better)
Translates to: CCCCGVPRVEFSFCEFCFGISNQ*GNLRLG
Trigger: ACCCAATCTCAAGTTGCCCAACTGATTAGAAATGCC...GAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGGTGGTCCAGTTAGCATaGACTGGTAAAATGGAAACA +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGVVQLA*TGKMET
Trigger: TGTTTCCATTTTACCAGTCAATGCTAACTGGACCAC...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AGTGTTGACAGTTCATCGAGCAAAGCCCTAGTTATTTTGGAGTCTCTCCTGCATAGTGGCTTTTATTTTTaGTGGGTGGCAACCTTAACC +
Preference number: 5 (lower is better)
Translates to: SVDSSSSKALVILESLLHSGFYF*WVATLT
Trigger: GGTTAAGGTTGCCACCCACAAAAAATAAAAGCCACT...ATGCAGGAGAGACTCCAAAATAACTAGGGCTTTGCTCGATGAACTGTCAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCCAACAGACTGAGAAAAATCCCAAGCTCTGGTGTGGACAGTGAGCACAATTACCTTTTTGGTTATAGCTaGAGTTCTTTGATACACCTC +
Preference number: 5 (lower is better)
Translates to: ANRLRKIPSSGVDSEHNYLFGYS*SSLIHL
Trigger: GAGGTGTATCAAAGAACTCAAGCTATAACCAAAAAG...GTAATTGTGCTCACTGTCCACACCAGAGCTTGGGATTTTTCTCAGTCTGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS TCA 90 bp CAGTTCTCCACTTTCTGTGTGCTTGGTTCTGAATCATTTCTGAAGTaGAGTACCAAATTCTTCCATCCACCTTTCTCCCTTAGTCCATAC +
Preference number: 5 (lower is better)
Translates to: QFSTFCVLGSESFLK*STKFFHPPFSLSPY
Trigger: GTATGGACTAAGGGAGAAAGGTGGATGGAAGAATTTGGTACTTCACTTCAGAAATGATTCAGAACCAAGCACACAGAAAGTGGAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517348.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATAAGAAGAGCACTCATTaGCCACTTCCTCTTGGATCA +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNKKSTH*PLPLGS
Trigger: TGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCTT...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTAAGAAGAGCACTCATTaGCCACTTCCTCTTGGATCA +
Preference number: 5 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFKKSTH*PLPLGS
Trigger: TGATCCAAGAGGAAGTGGCAAATGAGTGCTCTTCTT...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATCGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDRILKA*ANSRIS
Trigger: GGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GCAGAACCAAACTCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCCGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: AEPNSNYFSVIVQLLSNFRILKA*ANSRIS
Trigger: GGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...GAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGAGTTTGGTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416452.1
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGCGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKRILKA*ANSRIS
Trigger: GGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTAGGGCTTGCCTCTTATaGCAGAACCAAACTCTAACT +
Preference number: 5 (lower is better)
Translates to: CCCCCCGVPRVEFSFCEFRACLL*QNQTLT
Trigger: AGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCT...AAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTAGGGCTTGCCTCTTATaGCAGAACCAAACTCTAACT +
Preference number: 5 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFRACLL*QNQTLT
Trigger: AGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCT...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTATTTTGTTGTTGTTGTaGTTGTGGAGTCCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASILLLL*LWSPKG
Trigger: ACCCTTGGGACTCCACAACAACAACAACAACAAAAT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403058.6
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATCCAGTTGTTTAAATTaGCCCGCCACCTTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: PSYVILLTSLRRELFLMESSCLN*PATFLL
Trigger: GAGCAGAAAGGTGGCGGGCAAATTTAAACAACTGGA...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GGCTCGTGCTGTTTTAAGCGTTTAATTGTGTTCTTCAGGGCTTGCCTCTTATTGCCTCTAGTTCTCATATaGCAGGCTATTCTGATTGTT +
Preference number: 5 (lower is better)
Translates to: GSCCFKRLIVFFRACLLLPLVLI*QAILIV
Trigger: AACAATCAGAATAGCCTGCAATATGAGAACTAGAGG...CAATAAGAGGCAAGCCCTGAAGAACACAATTAAACGCTTAAAACAGCACGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATCATCCCAACATGTCCTaGCTTATTAGGTTATTGTGG +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDHPNMS*LIRLLW
Trigger: CCACAATAACCTAATAAGCAAGGACATGTTGGGATG...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGGTGGTCCAGTTAGCATaGACTGGTAAAATGGAAACA +
Preference number: 5 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKVVQLA*TGKMET
Trigger: TGTTTCCATTTTACCAGTCAATGCTAACTGGACCAC...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTTCTGTGATGTTGGCATaGAAGATCAAGTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASSVMLA*KIKLAV
Trigger: CACAGCTAACTTGATCTTCAATGCCAACATCACAGA...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATTTGCCCGCCACCTTTCTGCTCCATTTATATATCCCGAAGAGTAATTATTCCATTTTGTTGTTGTTGTaGTTGTGGAGTCCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: NLPATFLLHLYIPKSNYSILLLL*LWSPKG
Trigger: ACCCTTGGGACTCCACAACAACAACAACAACAAAAT...GGAATAATTACTCTTCGGGATATATAAATGGAGCAGAAAGGTGGCGGGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCACTTGTCCAGCTATCATaGGATCCTGACCAATTACAG +
Preference number: 5 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESLVQLS*DPDQLQ
Trigger: CTGTAATTGGTCAGGATCCAATGATAGCTGGACAAG...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518318.7
CDS-3UTR CAA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGATCCAGTTGTTTAAATTaGCCCGCCACCTTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRSSCLN*PATFLL
Trigger: GAGCAGAAAGGTGGCGGGCAAATTTAAACAACTGGA...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTTGCTTATTAGGTTATaGTGGCCCACAGATCTTTTA +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGLLIRL*WPTDLL
Trigger: TAAAAGATCTGTGGGCCACAATAACCTAATAAGCAA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGAATCAGTTGGGCAACTaGAGATTGGGTTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRNQLGN*RLGFSF
Trigger: AAAAGAGAAACCCAATCTCAAGTTGCCCAACTGATT...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATAGTGGCTTTTATTTTTaGTGGGTGGCAACCTTAACC +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYSGFYF*WVATLT
Trigger: GGTTAAGGTTGCCACCCACAAAAAATAAAAGCCACT...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGGGTTTAGTATTGCGAGATaGTCAGCAACATTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: VESQGWSLVSVNFASDYGFSIAR*SATFSH
Trigger: ATGGCTAAATGTTGCTGACAATCTCGCAATACTAAA...CCCATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAATTTGGAGCAGGAGGAACAGTTTAGTATaGCGAGATTGTCAGCAACAT +
Preference number: 5 (lower is better)
Translates to: YLVNFSSQGAFLDGIWSRRNSLV*RDCQQH
Trigger: ATGTTGCTGACAATCTCGCAATACTAAACTGTTCCT...CCTGCTCCAAATTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGAGGAACAGTTTAGTATaGCGAGATTGTCAGCAACAT +
Preference number: 5 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLRNSLV*RDCQQH
Trigger: ATGTTGCTGACAATCTCGCAATACTAAACTGTTCCT...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CAGTTTAGTATTGCGAGATTGTCAGCAACATTTAGCCATATCTATACAATGTGCGAGAAGCAGATCTCTTaGTGGTGCCTCATAAGTGAC +
Preference number: 5 (lower is better)
Translates to: QFSIARLSATFSHIYTMCEKQIS*WCLISD
Trigger: GTCACTTATGAGGCACCACAAAGAGATCTGCTTCTC...GCACATTGTATAGATATGGCTAAATGTTGCTGACAATCTCGCAATACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATCATTCTTTCAGCATCTaGACAGTAAACAGCAAACAG +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNHSFSI*TVNSKQ
Trigger: CTGTTTGCTGTTTACTGTCAAGATGCTGAAAGAATG...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403058.6
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATAGGCTTGTATTCGCTTaGAACAGATCAAAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: VVVESQGWSLVSVNFASDRLVFA*NRSKFL
Trigger: CAAAAACTTTGATCTGTTCAAAGCGAATACAAGCCT...ATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTAACCATTCTGTCCACTaGGTAGTTTTCTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: VVVVESQGWSLVSVNFASNHSVH*VVFLVI
Trigger: AATGACTAAGAAAACTACCAAGTGGACAGAATGGTT...AGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGATTACAAAATTAGTTTaGGTCAGCTCTCCATGTACG +
Preference number: 5 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLITKLV*VSSPCT
Trigger: CGTACATGGAGAGCTGACCAAAACTAATTTTGTAAT...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCATTACAAAATTAGTTTaGGTCAGCTCTCCATGTACG +
Preference number: 5 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAITKLV*VSSPCT
Trigger: CGTACATGGAGAGCTGACCAAAACTAATTTTGTAAT...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGTTGCTTATTAGGTTATaGTGGCCCACAGATCTTTTA +
Preference number: 5 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLLLIRL*WPTDLL
Trigger: TAAAAGATCTGTGGGCCACAATAACCTAATAAGCAA...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGTTGCTTATTAGGTTATaGTGGCCCACAGATCTTTTA +
Preference number: 5 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKLLIRL*WPTDLL
Trigger: TAAAAGATCTGTGGGCCACAATAACCTAATAAGCAA...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATAATCAGTTGGGCAACTaGAGATTGGGTTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNNQLGN*RLGFSF
Trigger: AAAAGAGAAACCCAATCTCAAGTTGCCCAACTGATT...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTTTGCTGCATGAATCATaGGAGGGGACAATTATACTG +
Preference number: 5 (lower is better)
Translates to: NMYISTASKLTALFCLLLLLHES*EGTIIL
Trigger: CAGTATAATTGTCCCCTCCAATGATTCATGCAGCAA...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCAGTGGTCCAGTTAGCATaGACTGGTAAAATGGAAACA +
Preference number: 5 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESVVQLA*TGKMET
Trigger: TGTTTCCATTTTACCAGTCAATGCTAACTGGACCAC...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGGGTGGCAACCTTAACCTTCAGTTCATGGAAACATAAAAGACACTTAAACGCCCATTGGCATATGAAGTaGTTTACAAGTAGACATGAG +
Preference number: 5 (lower is better)
Translates to: WVATLTFSSWKHKRHLNAHWHMK*FTSRHE
Trigger: CTCATGTCTACTTGTAAACAACTTCATATGCCAATG...GGCGTTTAAGTGTCTTTTATGTTTCCATGAACTGAAGGTTAAGGTTGCCACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCTAACTACTTCTCGGTCATAGTTCAGCTTCTCAGCAATTTCGGTCATTTCCTGCATTGGCATATGAAGTaGTTTACAAGTAGACATGAG +
Preference number: 5 (lower is better)
Translates to: SNYFSVIVQLLSNFGHFLHWHMK*FTSRHE
Trigger: CTCATGTCTACTTGTAAACAACTTCATATGCCAATG...CAGGAAATGACCGAAATTGCTGAGAAGCTGAACTATGACCGAGAAGTAGTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTGCATATACCTACAAATATTGAGCTTTGGTCCAGCGTAGAGAAACGAGCAAAGCTTTTTGGTTATAGCTaGAGTTCTTTGATACACCTC +
Preference number: 5 (lower is better)
Translates to: VHIPTNIELWSSVEKRAKLFGYS*SSLIHL
Trigger: GAGGTGTATCAAAGAACTCAAGCTATAACCAAAAAG...CTTTGCTCGTTTCTCTACGCTGGACCAAAGCTCAATATTTGTAGGTATATGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTATTCAGTTTGGCTTCTaGGTCACAAGTCTATCATGT +
Preference number: 5 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFIQFGF*VTSLSC
Trigger: ACATGATAGACTTGTGACCAAGAAGCCAAACTGAAT...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GAAATCTTGAGACATTTCTTTGGCTATCAGACTTCTGAGAGAAATTGCTTTGCACGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: EILRHFFGYQTSERNCFARILKA*ANSRIS
Trigger: GGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...TGCAAAGCAATTTCTCTCAGAAGTCTGATAGCCAAAGAAATGTCTCAAGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TTTGTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATGCCATGTTTCTGACTTaGGTTAATAGGTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: FVVVVVVESQGWSLVSVNAMFLT*VNRFHS
Trigger: ACTATGAAACCTATTAACCAAAGTCAGAAACATGGC...ATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATGCCATGTTTCTGACTTaGGTTAATAGGTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYAMFLT*VNRFHS
Trigger: ACTATGAAACCTATTAACCAAAGTCAGAAACATGGC...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTATTACAAAATTAGTTTaGGTCAGCTCTCCATGTACG +
Preference number: 5 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFITKLV*VSSPCT
Trigger: CGTACATGGAGAGCTGACCAAAACTAATTTTGTAAT...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTGCTTCTGATTATTTTAGTATTGCGAGATaGTCAGCAACATTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: VVESQGWSLVSVNFASDYFSIAR*SATFSH
Trigger: ATGGCTAAATGTTGCTGACAATCTCGCAATACTAAA...ATAATCAGAAGCAAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp AATATGTACATTTCAACAGCAAGCAAATTGACAGCTCTCTTTTGCCTGCTCCTTAGGAACAGTTTAGTATaGCGAGATTGTCAGCAACAT +
Preference number: 5 (lower is better)
Translates to: NMYISTASKLTALFCLLLRNSLV*RDCQQH
Trigger: ATGTTGCTGACAATCTCGCAATACTAAACTGTTCCT...AAGGAGCAGGCAAAAGAGAGCTGTCAATTTGCTTGCTGTTGAAATGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAATTCAGTTTGGCTTCTaGGTCACAAGTCTATCATGT +
Preference number: 5 (lower is better)
Translates to: PSYVILLTSLRRELFLMEIQFGF*VTSLSC
Trigger: ACATGATAGACTTGTGACCAAGAAGCCAAACTGAAT...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTGTTGTTGTTGTTGTGGAGTCCCAAGGGTGGAGTTTAGTTTCTGTGAATTTTCAGATAAAATCAGCTTaGGTTTCAATGTCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: VVVVVVESQGWSLVSVNFQIKSA*VSMSEQ
Trigger: TTGCTCTGACATTGAAACCAAAGCTGATTTTATCTG...AAAATTCACAGAAACTAAACTCCACCCTTGGGACTCCACAACAACAACAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGCGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTRILKA*ANSRIS
Trigger: GGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp CCATCATATGTTATCTTGTTAACTTCTCTTCGCAGGGAGCTTTTCTTGATGGAAGCAATCCATCATATGTaGTCTTTGAAAAGGAGAATG +
Preference number: 5 (lower is better)
Translates to: PSYVILLTSLRRELFLMEAIHHM*SLKRRM
Trigger: CATTCTCCTTTTCAAAGACAACATATGATGGATTGC...TTCCATCAAGAAAAGCTCCCTGCGAAGAGAAGTTAACAAGATAACATATGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TCGCGTTGCAATGCCATGTTTCTGACTTTGGTTAATAGGTTTCATAGTGAATCACATTGGCATATGAAGTaGTTTACAAGTAGACATGAG +
Preference number: 5 (lower is better)
Translates to: SRCNAMFLTLVNRFHSESHWHMK*FTSRHE
Trigger: CTCATGTCTACTTGTAAACAACTTCATATGCCAATG...TGATTCACTATGAAACCTATTAACCAAAGTCAGAAACATGGCATTGCAACGCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAGTTCTCTCTTTTGTGTaGTATGTGTATGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRVLSFV*YVYVCV
Trigger: CACACACACATACACATACAACACAAAAGAGAGAAC...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp GTTAGTACAAATGTAAAAATTCGTAACACAACTTTACGTGCGGAGAAGCGTAGAGCCATGTTTCTGACTTaGGTTAATAGGTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: VSTNVKIRNTTLRAEKRRAMFLT*VNRFHS
Trigger: ACTATGAAACCTATTAACCAAAGTCAGAAACATGGC...TCTACGCTTCTCCGCACGTAAAGTTGTGTTACGAATTTTTACATTTGTACTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS-3UTR CAA 90 bp TGTGCAGCTTATGTTTATATTACAAAATTAGTTTTGGTCAGCTCTCCATGTACGGTTCTCTCTTTTGTGTaGTATGTGTATGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: CAAYVYITKLVLVSSPCTVLSFV*YVYVCV
Trigger: CACACACACATACACATACAACACAAAAGAGAGAAC...CGTACATGGAGAGCTGACCAAAACTAATTTTGTAATATAAACATAAGCTGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS GCA 72 bp CTAGGGAGTTCCAGACAGTGGGCGCAGGTCAGTGGGTaGGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: LGSSRQWAQVSG*AHRARAEAGRG
Trigger: GCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGAACTCCCTAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517348.1
CDS TCA 72 bp ATACACCCCCTTCCGCCTCTGGTGTCAGGGCGTCCATaGGGCCCACTGGGCACCCACCATGGGTTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: IHPLPPLVSGRP*GPLGTHHGFLP
Trigger: TGGGAGAAACCCATGGTGGGTGCCCAGTGGGCCTCATGGACGCCCTGACACCAGAGGCGGAAGGGGGTGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS CCA 72 bp TGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACTTaGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGA +
Preference number: 6 (lower is better)
Translates to: CASRSRARHCLT*EAQGVREFPFR
Trigger: TCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517348.1
CDS GCA 72 bp TCTGGGCCACAGTCCTTCCCACTGCTCCTTCTGGCCTaGAGCCACCTGGCCCCTCTGAGTTTCTGTGTTGGC +
Preference number: 6 (lower is better)
Translates to: SGPQSFPLLLLA*SHLAPLSFCVG
Trigger: GCCAACACAGAAACTCAGAGGGGCCAGGTGGCTGCAGGCCAGAAGGAGCAGTGGGAAGGACTGTGGCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS CCA 72 bp AGATGGGAATCCAGAAAATACACCCCCTTCCGCCTCTaGTGTCAGGGCGTCCATGAGGCCCACTGGGCACCC +
Preference number: 6 (lower is better)
Translates to: RWESRKYTPFRL*CQGVHEAHWAP
Trigger: GGGTGCCCAGTGGGCCTCATGGACGCCCTGACACCAGAGGCGGAAGGGGGTGTATTTTCTGGATTCCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS TCA 72 bp TCCTTGGGTGCAGGATCTGTAGAGGATTGGGTGGCGTaGGCGGTGAAGGCAGGCCATGTCCTGGAGACTGAC +
Preference number: 6 (lower is better)
Translates to: SLGAGSVEDWVA*AVKAGHVLETD
Trigger: GTCAGTCTCCAGGACATGGCCTGCCTTCACCGCTCACGCCACCCAATCCTCTACAGATCCTGCACCCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517348.1
CDS CAA 90 bp ATCTGCTGGCCGGGCTTGATGGGTGACAGCGTGATGCCCTGGGTGTaGATCACGGGCAGGATCTGGTTCCCAATGACTGTGGCGATGATC +
Preference number: 6 (lower is better)
Translates to: ICWPGLMGDSVMPWV*ITGRIWFPMTVAMI
Trigger: GATCATCGCCACAGTCATTGGGAACCAGATCCTGCCCGTGATCAACACCCAGGGCATCACGCTGTCACCCATCAAGCCCGGCCAGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416452.1
CDS TCA 72 bp GGCGAAGAGCTTGCTGGGAGTGTCCTCGCTGTCATTTaGTTCCACAGGCGCAAGCAGGGGCTCATTCAGCTC +
Preference number: 6 (lower is better)
Translates to: GEELAGSVLAVI*FHRRKQGLIQL
Trigger: GAGCTGAATGAGCCCCTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACACTCCCAGCAAGCTCTTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464276.2
CDS TCA 72 bp TGGCTGCTGCATGACCAGGTACAGAGGTCACTCCTCTaGTGCTATTCAGCTCCTCTGGGCCACAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: WLLHDQVQRSLL*CYSAPLGHSPS
Trigger: GGAAGGACTGTGGCCCAGAGGAGCTGAATAGCATCAGAGGAGTGACCTCTGTACCTGGTCATGCAGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS CCA 72 bp TACAGAGGTCACTCCTCTGATGCTATTCAGCTCCTCTaGGCCACAGTCCTTCCCACTGCTCCTTCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: YRGHSSDAIQLL*ATVLPTAPSGL
Trigger: CAGGCCAGAAGGAGCAGTGGGAAGGACTGTGGCCCAGAGGAGCTGAATAGCATCAGAGGAGTGACCTCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426456.1
CDS CAA 72 bp AGGCGAAGAGCTTGCTGGGAGTGTCCTCGCTGTCATTaGATTCCACAGGCGCAAGCAGGGGCTCATTCAGCT +
Preference number: 6 (lower is better)
Translates to: RRRACWECPRCH*IPQAQAGAHSA
Trigger: AGCTGAATGAGCCCCTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACACTCCCAGCAAGCTCTTCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464276.2
CDS TCA 72 bp TCCACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: STAPSVSDAEDG*FLHFHLRYRVL
Trigger: AAGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517348.1
CDS TCA 72 bp TCTCACCAGTCCTGGCACTCCTGTATCAGATTCCAATaGGGATCAAGGCGAAGAGCTTGCTGGGAGTGTCCT +
Preference number: 6 (lower is better)
Translates to: SHQSWHSCIRFQ*GSRRRACWECP
Trigger: AGGACACTCCCAGCAAGCTCTTCGCCTTGATCCTCATTGGAATCTGATACAGGAGTGCCAGGACTGGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464276.2
CDS TCA 72 bp GCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCTTCTCACTAGGGAGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: ATQKTGDFCISI*GTGFFSLGSSR
Trigger: TCTGGAACTCCCTAGTGAGAAGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517348.1
CDS CCA 72 bp CCAAGAGAGTTCATGCCTGACCAATTACAGCTTGCATaGTCCCCGTGTCCTGCTGCGCTGAGAGATAGCAAT +
Preference number: 6 (lower is better)
Translates to: PREFMPDQLQLA*SPCPAALRDSN
Trigger: ATTGCTATCTCTCAGCGCAGCAGGACACGGGGACCATGCAAGCTGTAATTGGTCAGGCATGAACTCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673891.1
ENST00000674059.1
CDS CCA 72 bp CAGCTATCATTGGATCCTGACCAATTACAGCTTGCATaGTCCCCGTGTCCTGCTGCGCTGAGAGATAGCAAT +
Preference number: 6 (lower is better)
Translates to: QLSLDPDQLQLA*SPCPAALRDSN
Trigger: ATTGCTATCTCTCAGCGCAGCAGGACACGGGGACCATGCAAGCTGTAATTGGTCAGGATCCAATGATAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518318.7
CDS TCA 72 bp CATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTGGATCCTAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: HSFHSALTARAY*LVQLSLDPRMG
Trigger: GCCCATCCTAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673818.5
CDS TCA 72 bp CATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTGGATCAGTCCATGCCA +
Preference number: 6 (lower is better)
Translates to: HSFHSALTARAY*LVQLSLDQSMP
Trigger: TGGCATGGACTGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451021.5
CDS TCA 72 bp AATTACAGCTTGCATGGTCCCCGTGTCCTGCTGCGCTaGGAGATAGCAATCCATCATATGTTGTCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: NYSLHGPRVLLR*EIAIHHMLSLK
Trigger: TTTCAAAGACAACATATGATGGATTGCTATCTCTCAGCGCAGCAGGACACGGGGACCATGCAAGCTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS TCA 72 bp CATTCATTTCACTCCGCACTGACAGCAAGGGCTTACTaGCTTGTCCAGCTATCATTGGATCCTGACCAATTA +
Preference number: 6 (lower is better)
Translates to: HSFHSALTARAY*LVQLSLDPDQL
Trigger: TAATTGGTCAGGATCCAATGATAGCTGGACAAGTCAGTAAGCCCTTGCTGTCAGTGCGGAGTGAAATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518318.7
CDS CAA 90 bp AGCTTGAATTTGCTAGTGATAGATTTGCATTTTGTTTACTGGGTCTaGTTGCTGGGATTTGGAGCGCTTGAAACTTGGGGTAGATGGGGG +
Preference number: 6 (lower is better)
Translates to: SLNLLVIDLHFVYWV*LLGFGALETWGRWG
Trigger: CCCCCATCTACCCCAAGTTTCAAGCGCTCCAAATCCCAGCAACAAGACCCAGTAAACAAAATGCAAATCTATCACTAGCAAATTCAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524147.5
CDS CAA 72 bp CTAGTGATAGATTTGCATTTTGTTTACTGGGTCTTGTaGCTGGGATTTGGAGCGCTTGAAACTTGGGGTAGA +
Preference number: 6 (lower is better)
Translates to: LVIDLHFVYWVL*LGFGALETWGR
Trigger: TCTACCCCAAGTTTCAAGCGCTCCAAATCCCAGCAACAAGACCCAGTAAACAAAATGCAAATCTATCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524147.5
CDS CAA 72 bp TTGCTAGTGATAGATTTGCATTTTGTTTACTGGGTCTaGTTGCTGGGATTTGGAGCGCTTGAAACTTGGGGT +
Preference number: 6 (lower is better)
Translates to: LLVIDLHFVYWV*LLGFGALETWG
Trigger: ACCCCAAGTTTCAAGCGCTCCAAATCCCAGCAACAAGACCCAGTAAACAAAATGCAAATCTATCACTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524147.5
CDS CCA 72 bp TCATATGTTGTCTTTGAAAAGGAGAATGGGGGTTTCTaGCATGCATCTGTCAATCAACTTCTGCACTCACAA +
Preference number: 6 (lower is better)
Translates to: SYVVFEKENGGF*HASVNQLLHSQ
Trigger: TTGTGAGTGCAGAAGTTGATTGACAGATGCATGCCAGAAACCCCCATTCTCCTTTTCAAAGACAACATATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518318.7
ENST00000673891.1
ENST00000674059.1
CDS TCA 72 bp CAATATGTGACCAATTGTGTTAGATTGTTCGGCCATTaGTTTCACTTAGAGCTACAGTTGAGTCTGAAAGGA +
Preference number: 6 (lower is better)
Translates to: QYVTNCVRLFGH*FHLELQLSLKG
Trigger: TCCTTTCAGACTCAACTGTAGCTCTAAGTGAAATCAATGGCCGAACAATCTAACACAATTGGTCACATATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464276.2
CDS CAA 72 bp CACAGTATTGTCAGCTTGAATTTGCTAGTGATAGATTaGCATTTTGTTTACTGGGTCTTGTTGCTGGGATTT +
Preference number: 6 (lower is better)
Translates to: HSIVSLNLLVID*HFVYWVLLLGF
Trigger: AAATCCCAGCAACAAGACCCAGTAAACAAAATGCAAATCTATCACTAGCAAATTCAAGCTGACAATACTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524147.5
CDS CAA 72 bp TTTAATATTTCAGAGGTGGCTAATAAACATGCAAACTaGATAAATGTTCTGATGAAGGAAGCACAATGCCCG +
Preference number: 6 (lower is better)
Translates to: FNISEVANKHAN*INVLMKEAQCP
Trigger: CGGGCATTGTGCTTCCTTCATCAGAACATTTATCAAGTTTGCATGTTTATTAGCCACCTCTGAAATATTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426456.1