Pregenerated sensors for POU5F1 (Homo sapiens)

Ensembl gene IDs: ENSG00000204531

Ensembl transcript IDs: ENST00000471529.6, ENST00000513407.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGAAATAACCTACCCACAAATGTCATTCACCCATTCCCTGTTCACTaGCTCATGCATGTAACAAAGGACTACTCTTCCCCCAGAAACTGG	+
Preference number: 5 (lower is better) Translates to: RNNLPTNVIHPFPVH*LMHVTKDYSSPRNW Trigger: CCAGTTTCTGGGGGAAGAGTAGTCCTTTGTTACATGCATGAGTCAGTGAACAGGGAATGGGTGAATGACATTTGTGGGTAGGTTATTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000471529.6 ENST00000513407.1
CDS TCA 72 bp	CTACCCACAAATGTCATTCACCCATTCCCTGTTCACTaGCTCATGCATGTAACAAAGGACTACTCTTCCCCC	+
Preference number: 6 (lower is better) Translates to: LPTNVIHPFPVH*LMHVTKDYSSP Trigger: GGGGGAAGAGTAGTCCTTTGTTACATGCATGAGTCAGTGAACAGGGAATGGGTGAATGACATTTGTGGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000471529.6 ENST00000513407.1
CDS CAA 72 bp	CATGACAGAAGTGCTATTTGGCACTTGTTCTTCAAGTaGCCCACTTGGATCTCTTCCAAGTGCACTTTCCTT	+
Preference number: 6 (lower is better) Translates to: HDRSAIWHLFFK*PTWISSKCTFL Trigger: AAGGAAAGTGCACTTGGAAGAGATCCAAGTGGGCAACTTGAAGAACAAGTGCCAAATAGCACTTCTGTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513407.1
CDS GCA 72 bp	ATGACAGAAGTGCTATTTGGCACTTGTTCTTCAAGTTaGCCACTTGGATCTCTTCCAAGTGCACTTTCCTTT	+
Preference number: 6 (lower is better) Translates to: MTEVLFGTCSSS*PLGSLPSALSF Trigger: AAAGGAAAGTGCACTTGGAAGAGATCCAAGTGGGCAACTTGAAGAACAAGTGCCAAATAGCACTTCTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513407.1

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