RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POU3F4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196767

Ensembl transcript IDs: ENST00000644024.2

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGACTAGGCGGCCAGCAGTGGCGTGCAGCGCCCCCAGCCAGGTCTaGCCGGCGGCGGCTGGGTGTTGGGTGCTTGGCCGGCCTCACACG +
Preference number: 1 (lower is better)
Translates to: RTRRPAVACSAPSQV*PAAAGCWVLGRPHT
Trigger: CGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGCTGGGGGCGCTGCACGCCACTGCTGGCCGCCTAGTCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp AGCAGTGGCGTGCAGCGCCCCCAGCCAGGTCTGGCCGGCGGCGGCTaGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTTGG +
Preference number: 1 (lower is better)
Translates to: SSGVQRPQPGLAGGG*VLGAWPASHVCAPW
Trigger: CCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGCTGGGGGCGCTGCACGCCACTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp GCGTGCAGCGCCCCCAGCCAGGTCTGGCCGGCGGCGGCTGGGTGTTaGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTTGGGAATGAG +
Preference number: 1 (lower is better)
Translates to: ACSAPSQVWPAAAGC*VLGRPHTCVLLGNE
Trigger: CTCATTCCCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGCTGGGGGCGCTGCACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp GGTCGCGCGGAAGGTCGCCCTAGCGAGGCTGGGGGCCTGGATTTCTaGGCGCAGGAATCCTGGAGTCCGGTGAGTGCGGAGCCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: GRAEGRPSEAGGLDF*AQESWSPVSAEPSQ
Trigger: CTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGGGCGACCTTCCGCGCGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp GCAGCGCCCCCAGCCAGGTCTGGCCGGCGGCGGCTGGGTGTTGGGTaGTTGGCCGGCCTCACACGTGTGTGCTCCTTGGGAATGAGGTTC +
Preference number: 1 (lower is better)
Translates to: AAPPARSGRRRLGVG*LAGLTRVCSLGMRF
Trigger: GAACCTCATTCCCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGCTGGGGGCGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp CGCCCTAGCGAGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTaGAGTCCGGTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCT +
Preference number: 1 (lower is better)
Translates to: RPSEAGGLDFCAQES*SPVSAEPSQTVRPP
Trigger: AGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 90 bp AGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTaGGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCA +
Preference number: 1 (lower is better)
Translates to: RLGAWISARRNPGVR*VRSPPRLSGHLFGP
Trigger: TGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 90 bp CCCTCCCCAAGGGTTTCTTACTCAGAGGGGGCGGTGAACTGGAGGTaGACCGAAATGGGAGGCGCTGGCCCAGTCGCCAGCGTCTCCGGG +
Preference number: 1 (lower is better)
Translates to: PSPRVSYSEGAVNWR*TEMGGAGPVASVSG
Trigger: CCCGGAGACGCTGGCGACTGGGCCAGCGCCTCCCATTTCGGTTCACCTCCAGTTCACCGCCCCCTCTGAGTAAGAAACCCTTGGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp TGGGGGCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGAGTaGGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGT +
Preference number: 1 (lower is better)
Translates to: WGPGFLRAGILESGE*GALPDCQATSLAQS
Trigger: ACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp CGGCGGCGGCTGGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTaGTCCTTGGGAATGAGGTTCGCCTGTGGACCTGGTGTGTGGATA +
Preference number: 1 (lower is better)
Translates to: RRRLGVGCLAGLTRV*SLGMRFACGPGVWI
Trigger: TATCCACACACCAGGTCCACAGGCGAACCTCATTCCCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp CTCAGAGGGGGCGGTGAACTGGAGGTGAACCGAAATGGGAGGCGCTaGCCCAGTCGCCAGCGTCTCCGGGTCGTGATCTCCAGTGAAAGT +
Preference number: 1 (lower is better)
Translates to: LRGGGELEVNRNGRR*PSRQRLRVVISSES
Trigger: ACTTTCACTGGAGATCACGACCCGGAGACGCTGGCGACTGGGCCAGCGCCTCCCATTTCGGTTCACCTCCAGTTCACCGCCCCCTCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 90 bp GTAATCGCGTGTGAAGGCAAAGTCTTTCCTCTAGGAGGGCCGAAGTaGGGTCGCGCGGAAGGTCGCCCTAGCGAGGCTGGGGGCCTGGAT +
Preference number: 1 (lower is better)
Translates to: VIACEGKVFPLGGPK*GRAEGRPSEAGGLD
Trigger: ATCCAGGCCCCCAGCCTCGCTAGGGCGACCTTCCGCGCGACCTCACTTCGGCCCTCCTAGAGGAAAGACTTTGCCTTCACACGCGATTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp GCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTaGGGTAGCCTGCGCGGGCTCCACACTTCCAGGAGGGAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: AQSCRRILLRYLDLC*GSLRGLHTSRREGR
Trigger: TCTGCCCTCCCTCCTGGAAGTGTGGAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp TTGGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATaGTGCGGTAGCCTGCGCGGGCTCCACACTTCCAGGAGGGAGGGC +
Preference number: 1 (lower is better)
Translates to: LAQSCRRILLRYLDL*CGSLRGLHTSRREG
Trigger: GCCCTCCCTCCTGGAAGTGTGGAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp CGCTCGCTAGCTCGCTGGATCGTCGCTGTGGGCTTCCACCAGCTGTaGTTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACA +
Preference number: 1 (lower is better)
Translates to: RSLARWIVAVGFHQL*LSETPRQLPTSPHT
Trigger: TGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAGCTGGTGGAAGCCCACAGCGACGATCCAGCGAGCTAGCGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp GCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTaGGCGGGCTCCACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAA +
Preference number: 1 (lower is better)
Translates to: AAESFSDTSIYAAVA*AGSTLPGGRAESCE
Trigger: TTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGTGGAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp TGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTaGCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGC +
Preference number: 1 (lower is better)
Translates to: CGALPDCQATSLAQS*RRILLRYLDLCCGS
Trigger: GCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp TTCGACCTGCAGCTGAGGGAGACACAGTGTGGTGGACCAGAGGCCTaGCAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTC +
Preference number: 1 (lower is better)
Translates to: FDLQLRETQCGGPEA*QLILTHPRQPGRAF
Trigger: GAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACACTGTGTCTCCCTCAGCTGCAGGTCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 90 bp CGCCAGCGTCTCCGGGTCGTGATCTCCAGTGAAAGTAATCGCGTGTaGAGGCAAAGTCTTTCCTCTAGGAGGGCCGAAGTGAGGTCGCGC +
Preference number: 1 (lower is better)
Translates to: RQRLRVVISSESNRV*RQSLSSRRAEVRSR
Trigger: GCGCGACCTCACTTCGGCCCTCCTAGAGGAAAGACTTTGCCTTCACACGCGATTACTTTCACTGGAGATCACGACCCGGAGACGCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp AGTCCGGTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTaGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTAT +
Preference number: 1 (lower is better)
Translates to: SPVSAEPSQTVRPPL*PRVAAESFSDTSIY
Trigger: ATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 90 bp ACCGAAATGGGAGGCGCTGGCCCAGTCGCCAGCGTCTCCGGGTCGTaGTCTCCAGTGAAAGTAATCGCGTGTGAAGGCAAAGTCTTTCCT +
Preference number: 1 (lower is better)
Translates to: TEMGGAGPVASVSGS*SPVKVIACEGKVFP
Trigger: AGGAAAGACTTTGCCTTCACACGCGATTACTTTCACTGGAGATCACGACCCGGAGACGCTGGCGACTGGGCCAGCGCCTCCCATTTCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp ACGCGGATGGACCAGAATCCCTGTGACCTTTGCCAATCATTTCATTaGCGTTCTGCACTGAGCAGAGAATGCCTATCCCCCACTCCCTCG +
Preference number: 1 (lower is better)
Translates to: TRMDQNPCDLCQSFH*RSALSRECLSPTPS
Trigger: CGAGGGAGTGGGGGATAGGCATTCTCTGCTCAGTGCAGAACGGCAATGAAATGATTGGCAAAGGTCACAGGGATTCTGGTCCATCCGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp TTAACACATGCTCTTCGACCTGCAGCTGAGGGAGACACAGTGTGGTaGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACC +
Preference number: 1 (lower is better)
Translates to: LTHALRPAAEGDTVW*TRGLATHTNASSTT
Trigger: GGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACACTGTGTCTCCCTCAGCTGCAGGTCGAAGAGCATGTGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp GAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTaGAAACCTAATAGGCTTCCCTATTCTGCCCTTCCTAGGCACTCC +
Preference number: 1 (lower is better)
Translates to: EGRKLRNRRCYFALV*KPNRLPYSALPRHS
Trigger: GGAGTGCCTAGGAAGGGCAGAATAGGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp GAATTAACACATGCTCTTCGACCTGCAGCTGAGGGAGACACAGTGTaGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACA +
Preference number: 1 (lower is better)
Translates to: ELTHALRPAAEGDTV*WTRGLATHTNASST
Trigger: TGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACACTGTGTCTCCCTCAGCTGCAGGTCGAAGAGCATGTGTTAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 90 bp CTCCACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTaGTACTTCGCACTAGTTTGCAAACCTAATAGGCTTCCCTATTCT +
Preference number: 1 (lower is better)
Translates to: LHTSRREGRKLRNRR*YFALVCKPNRLPYS
Trigger: AGAATAGGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 90 bp CGTGTGTGCTCCTTGGGAATGAGGTTCGCCTGTGGACCTGGTGTGTaGATACTAGCTAGCAATAAAGCCACAGCAACTGCATATTTTTGG +
Preference number: 1 (lower is better)
Translates to: RVCSLGMRFACGPGV*ILASNKATATAYFW
Trigger: CCAAAAATATGCAGTTGCTGTGGCTTTATTGCTAGCTAGTATCCACACACCAGGTCCACAGGCGAACCTCATTCCCAAGGAGCACACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 90 bp AGAGAGAGAAAAATAATAAAGAATACTAGAATGAAAGGAAGAGAGTaGGAGAGAAAGAGAAATCCGCGCTGCTCCCAGTGCGGCCGGCCG +
Preference number: 1 (lower is better)
Translates to: RERKIIKNTRMKGRE*ERKRNPRCSQCGRP
Trigger: CGGCCGGCCGCACTGGGAGCAGCGCGGATTTCTCTTTCTCTCTCACTCTCTTCCTTTCATTCTAGTATTCTTTATTATTTTTCTCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 90 bp GCGCCCCCAGCCAGGTCTGGCCGGCGGCGGCTGGGTGTTGGGTGCTaGGCCGGCCTCACACGTGTGTGCTCCTTGGGAATGAGGTTCGCC +
Preference number: 2 (lower is better)
Translates to: APPARSGRRRLGVGC*AGLTRVCSLGMRFA
Trigger: GGCGAACCTCATTCCCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGCTGGGGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR TCA 90 bp GGCGGCGGCTGGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTTGGGCGGTGAACTGGAGGTaGACCGAAATGGGAGGCGCT +
Preference number: 2 (lower is better)
Translates to: GGGWVLGAWPASHVCAPWAVNWR*TEMGGA
Trigger: AGCGCCTCCCATTTCGGTTCACCTCCAGTTCACCGC...CCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR GCA 90 bp GTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTGCCAAGAGAAATCCGCGCTaGTCCCAGTGCGGCCGGCCG +
Preference number: 2 (lower is better)
Translates to: VSAEPSQTVRPPLWPRVAKRNPR*SQCGRP
Trigger: CGGCCGGCCGCACTGGGAGCAGCGCGGATTTCTCTT...GGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CCA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCCGAAATGGGAGGCGCTaGCCCAGTCGCCAGCGTCTC +
Preference number: 2 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGRNGRR*PSRQRL
Trigger: GAGACGCTGGCGACTGGGCCAGCGCCTCCCATTTCG...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 90 bp CGGCTGGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTaGGGAATGAGGTTCGCCTGTGGACCTGGTGTGTGGATACTAGCT +
Preference number: 2 (lower is better)
Translates to: RLGVGCLAGLTRVCS*GMRFACGPGVWILA
Trigger: AGCTAGTATCCACACACCAGGTCCACAGGCGAACCTCATTCCCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR TCA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCAATCCTGGAGTCCGGTaGGTGCGGAGCCCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGNPGVR*VRSPPR
Trigger: TCTGGGAGGGCTCCGCACTCACCGGACTCCAGGATT...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR TCA 90 bp TTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATACTAGGAGGGCCGAAGTaGGGTCGCGCGGAAGGTCGC +
Preference number: 2 (lower is better)
Translates to: LSETPRQLPTSPHTDSGILGGPK*GRAEGR
Trigger: GCGACCTTCCGCGCGACCTCACTTCGGCCCTCCTAG...TATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 90 bp GAGTCCGGTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTaGGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTA +
Preference number: 2 (lower is better)
Translates to: ESGECGALPDCQATS*AQSCRRILLRYLDL
Trigger: TAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACCGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR TCA 90 bp AAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGCGGCCAGCAGTGGACTCAGAGGGGGCGGTaGACTGGAGGTGAACCGAAA +
Preference number: 2 (lower is better)
Translates to: KLCLQQLRLKAGLGGQQWTQRGR*TGGEPK
Trigger: TTTCGGTTCACCTCCAGTTCACCGCCCCCTCTGAGT...CCACTGCTGGCCGCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR GCA 90 bp CTGTGCTTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCTACCTCGATCTATGCTaGGGTAGCCTGCGCGGGCTC +
Preference number: 2 (lower is better)
Translates to: LCLSETPRQLPTSPHTDSYLDLC*GSLRGL
Trigger: GAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTA...GCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR GCA 90 bp GGCGGCGGCTGGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTTGGAATCCCTGTGACCTTTaGCAATCATTTCATTGCCGT +
Preference number: 2 (lower is better)
Translates to: GGGWVLGAWPASHVCAPWNPCDL*QSFHCR
Trigger: ACGGCAATGAAATGATTGGCAAAGGTCACAGGGATT...CCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CCA 90 bp CAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTTGCGCGCAGGAATCCTaGAGTCCGGTGAGTGCGGAG +
Preference number: 2 (lower is better)
Translates to: QLILTHPRQPGRAFWSLGCAQES*SPVSAE
Trigger: CTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCA...ACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CCA 90 bp TTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATAGCGAGGCTGGGGGCCTaGATTTCTGCGCGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: LSETPRQLPTSPHTDSGIARLGA*ISARRN
Trigger: ATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGC...TATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 90 bp ACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTAGTTaGAAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGC +
Preference number: 2 (lower is better)
Translates to: THPRQPGRAFWSLGS*KLCLQQLRLKAGLG
Trigger: GCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTTCAAACTACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR GCA 90 bp AAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGCGGCCAGCAGTGGGCTAAAGGGAACTGTTaGCCGGGGAGCCAGGAATAT +
Preference number: 2 (lower is better)
Translates to: KLCLQQLRLKAGLGGQQWAKGNC*PGSQEY
Trigger: ATATTCCTGGCTCCCCGGGCAACAGTTCCCTTTAGC...CCACTGCTGGCCGCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR GCA 90 bp AGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCGGGAGGGCAGAAAGCTaGGAAATCGCCGCTGCTACT +
Preference number: 2 (lower is better)
Translates to: SCRRILLRYLDLCCGSLRGRAES*EIAAAT
Trigger: AGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCC...GCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CCA 90 bp AAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATACATGGGAGGTGGTACGCGGATaGACCAGAATCCCTGTGACC +
Preference number: 2 (lower is better)
Translates to: KRRDSSPRAHTQTAVYTWEVVRG*TRIPVT
Trigger: GGTCACAGGGATTCTGGTCCATCCGCGTACCACCTC...CCATGTATATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CCA 90 bp ACACAGTGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAAGTCAGGCCACCTCTTTaGCCCAGAGTTGCCGCCGAA +
Preference number: 2 (lower is better)
Translates to: TQCGGPEAWQLILTHPRQVRPPL*PRVAAE
Trigger: TTCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGAC...TTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACACTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR TCA 90 bp CCCCACGTTATCCCACTCCTTGTTCTTCCTAGAGAGGAGCGACCAAACAAACCTGGGGAGCCAGGAATATaGGATCCCAGCTTGGACTGC +
Preference number: 2 (lower is better)
Translates to: PHVIPLLVLPREERPNKPGEPGI*DPSLDC
Trigger: GCAGTCCAAGCTGGGATCTCATATTCCTGGCTCCCC...AGGTTTGTTTGGTCGCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR GCA 90 bp TTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATCTTTGGCCCAGAGTTaGCGCCGAATCCTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: LSETPRQLPTSPHTDSGISLAQS*RRILLR
Trigger: TCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGA...TATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR TCA 90 bp AAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGCGGCCAGCAGTGGATTGAGAAGCCTGAATaGGAGAGTATGTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: KLCLQQLRLKAGLGGQQWIEKPE*ESMCFL
Trigger: AAGGAAACACATACTCTCTCATTCAGGCTTCTCAAT...CCACTGCTGGCCGCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR GCA 90 bp TTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATACACCTGAAATACAGCTaGTATAACCAAGGCGCTGAA +
Preference number: 2 (lower is better)
Translates to: LSETPRQLPTSPHTDSGIHLKYS*YNQGAE
Trigger: TTCAGCGCCTTGGTTATAGCAGCTGTATTTCAGGTG...TATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 90 bp TTGTACATAGTAACGCGATACACACAGCTATCTACACACACACGTTaGCACGCGCACGCACACACACACACGCACAGAGACACATACACA +
Preference number: 2 (lower is better)
Translates to: LYIVTRYTQLSTHTR*HAHAHTHTHRDTYT
Trigger: TGTGTATGTGTCTCTGTGCGTGTGTGTGTGTGCGTGCGCGTGCAAACGTGTGTGTGTAGATAGCTGTGTGTATCGCGTTACTATGTACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp GTGCAGCGCCCCCAGCCAGGTCTGGCCGGCGGCGGCTaGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGT +
Preference number: 3 (lower is better)
Translates to: VQRPQPGLAGGG*VLGAWPASHVC
Trigger: ACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGCTGGGGGCGCTGCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp GCCCCCAGCCAGGTCTGGCCGGCGGCGGCTGGGTGTTaGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTT +
Preference number: 3 (lower is better)
Translates to: APSQVWPAAAGC*VLGRPHTCVLL
Trigger: AAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGCTGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp GAAGGTCGCCCTAGCGAGGCTGGGGGCCTGGATTTCTaGGCGCAGGAATCCTGGAGTCCGGTGAGTGCGGAG +
Preference number: 3 (lower is better)
Translates to: EGRPSEAGGLDF*AQESWSPVSAE
Trigger: CTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGGGCGACCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp GAGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTaGAGTCCGGTGAGTGCGGAGCCCTCCCAGACTGTC +
Preference number: 3 (lower is better)
Translates to: EAGGLDFCAQES*SPVSAEPSQTV
Trigger: GACAGTCTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp GGCGGTGAACTGGAGGTGAACCGAAATGGGAGGCGCTaGCCCAGTCGCCAGCGTCTCCGGGTCGTGATCTCC +
Preference number: 3 (lower is better)
Translates to: GGELEVNRNGRR*PSRQRLRVVIS
Trigger: GGAGATCACGACCCGGAGACGCTGGCGACTGGGCCAGCGCCTCCCATTTCGGTTCACCTCCAGTTCACCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp GCAGGAACCCAGCCTCCCGGGCGCTCGCTAGCTCGCTaGATCGTCGCTGTGGGCTTCCACCAGCTGTGCTTA +
Preference number: 3 (lower is better)
Translates to: AGTQPPGRSLAR*IVAVGFHQLCL
Trigger: TAAGCACAGCTGGTGGAAGCCCACAGCGACGATCCAGCGAGCTAGCGAGCGCCCGGGAGGCTGGGTTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CAA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCGGCGGCGGCTGGGTGTaGGGTGCTTGGCCGGCCTCA +
Preference number: 3 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGGGGWV*GAWPAS
Trigger: TGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCC...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 72 bp GCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTaGGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTC +
Preference number: 3 (lower is better)
Translates to: AWISARRNPGVR*VRSPPRLSGHL
Trigger: GAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CAA 90 bp AAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGCGGCCAGCAGTGGTGTCAGGCCACCTCTTaGGCCCAGAGTTGCCGCCGA +
Preference number: 3 (lower is better)
Translates to: KLCLQQLRLKAGLGGQQWCQATS*AQSCRR
Trigger: TCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGACA...CCACTGCTGGCCGCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 72 bp TGTGAAGGCAAAGTCTTTCCTCTAGGAGGGCCGAAGTaGGGTCGCGCGGAAGGTCGCCCTAGCGAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: CEGKVFPLGGPK*GRAEGRPSEAG
Trigger: CCCAGCCTCGCTAGGGCGACCTTCCGCGCGACCTCACTTCGGCCCTCCTAGAGGAAAGACTTTGCCTTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 72 bp AGGGTTTCTTACTCAGAGGGGGCGGTGAACTGGAGGTaGACCGAAATGGGAGGCGCTGGCCCAGTCGCCAGC +
Preference number: 3 (lower is better)
Translates to: RVSYSEGAVNWR*TEMGGAGPVAS
Trigger: GCTGGCGACTGGGCCAGCGCCTCCCATTTCGGTTCACCTCCAGTTCACCGCCCCCTCTGAGTAAGAAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp GGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGAGTaGGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTG +
Preference number: 3 (lower is better)
Translates to: GFLRAGILESGE*GALPDCQATSL
Trigger: CAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp GCTCGCTGGATCGTCGCTGTGGGCTTCCACCAGCTGTaGTTATCAGAAACGCCGAGACAGCTCCCCACGAGC +
Preference number: 3 (lower is better)
Translates to: ARWIVAVGFHQL*LSETPRQLPTS
Trigger: GCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAGCTGGTGGAAGCCCACAGCGACGATCCAGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp CTGGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTaGTCCTTGGGAATGAGGTTCGCCTGTGGACCTGGT +
Preference number: 3 (lower is better)
Translates to: LGVGCLAGLTRV*SLGMRFACGPG
Trigger: ACCAGGTCCACAGGCGAACCTCATTCCCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 72 bp GGAGGCGCTGGCCCAGTCGCCAGCGTCTCCGGGTCGTaGTCTCCAGTGAAAGTAATCGCGTGTGAAGGCAAA +
Preference number: 3 (lower is better)
Translates to: GGAGPVASVSGS*SPVKVIACEGK
Trigger: TTTGCCTTCACACGCGATTACTTTCACTGGAGATCACGACCCGGAGACGCTGGCGACTGGGCCAGCGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp TGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTaGGGTAGCCTGCGCGGGCTCCACACTTCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: CRRILLRYLDLC*GSLRGLHTSRR
Trigger: CCTCCTGGAAGTGTGGAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp AGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTaGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACC +
Preference number: 3 (lower is better)
Translates to: SAEPSQTVRPPL*PRVAAESFSDT
Trigger: GGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp AGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATaGTGCGGTAGCCTGCGCGGGCTCCACACTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SCRRILLRYLDL*CGSLRGLHTSR
Trigger: CCTGGAAGTGTGGAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp TCCCCACGAGCCCACACACAGACAGCGGTATATACATaGGGGGAGAGGTGGTACGCGGATGGACCAGAATCC +
Preference number: 3 (lower is better)
Translates to: SPRAHTQTAVYT*GERWYADGPES
Trigger: GGATTCTGGTCCATCCGCGTACCACCTCTCCCCCCATGTATATACCGCTGTCTGTGTGTGGGCTCGTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CAA 90 bp GCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCACACGTGTGTGCTCCTaGGGAATGAGGTTCGCCTGT +
Preference number: 3 (lower is better)
Translates to: AWQLILTHPRQPGRAFWSTRVCS*GMRFAC
Trigger: ACAGGCGAACCTCATTCCCAAGGAGCACACACGTGT...GGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp GCTCTTCGACCTGCAGCTGAGGGAGACACAGTGTGGTaGACCAGAGGCCTGGCAACTCATACTAACGCATCC +
Preference number: 3 (lower is better)
Translates to: ALRPAAEGDTVW*TRGLATHTNAS
Trigger: GGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACACTGTGTCTCCCTCAGCTGCAGGTCGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp CTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTaGCGCCGAATCCTTCTCAGATACCTCGATCTATGC +
Preference number: 3 (lower is better)
Translates to: LPDCQATSLAQS*RRILLRYLDLC
Trigger: GCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp CATGCTCTTCGACCTGCAGCTGAGGGAGACACAGTGTaGTGGACCAGAGGCCTGGCAACTCATACTAACGCA +
Preference number: 3 (lower is better)
Translates to: HALRPAAEGDTV*WTRGLATHTNA
Trigger: TGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACACTGTGTCTCCCTCAGCTGCAGGTCGAAGAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 72 bp CTCCGGGTCGTGATCTCCAGTGAAAGTAATCGCGTGTaGAGGCAAAGTCTTTCCTCTAGGAGGGCCGAAGTG +
Preference number: 3 (lower is better)
Translates to: LRVVISSESNRV*RQSLSSRRAEV
Trigger: CACTTCGGCCCTCCTAGAGGAAAGACTTTGCCTTCACACGCGATTACTTTCACTGGAGATCACGACCCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR TCA 72 bp GTGACCTTTGCCAATCATTTCATTGCCGTTCTGCACTaGGCAGAGAATGCCTATCCCCCACTCCCTCGCCAC +
Preference number: 3 (lower is better)
Translates to: VTFANHFIAVLH*AENAYPPLPRH
Trigger: GTGGCGAGGGAGTGGGGGATAGGCATTCTCTGCTCAGTGCAGAACGGCAATGAAATGATTGGCAAAGGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp TCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTaGTACTTCGCACTAGTTTGCAAACCTAATAGGCTT +
Preference number: 3 (lower is better)
Translates to: SRREGRKLRNRR*YFALVCKPNRL
Trigger: AAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp GGTGGTACGCGGATGGACCAGAATCCCTGTGACCTTTaGCAATCATTTCATTGCCGTTCTGCACTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: GGTRMDQNPCDL*QSFHCRSALSR
Trigger: TCTGCTCAGTGCAGAACGGCAATGAAATGATTGGCAAAGGTCACAGGGATTCTGGTCCATCCGCGTACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CAA 90 bp CTGTGCTTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCAACTGTGTATCAGCATaGAGAAGCCTGAATGAGAGA +
Preference number: 3 (lower is better)
Translates to: LCLSETPRQLPTSPHTDSNCVSA*RSLNER
Trigger: TCTCTCATTCAGGCTTCTCAATGCTGATACACAGTT...GCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CAA 90 bp CTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTGCAAACCTAATAGGCTTCCCACGTTATCCCACTCCTaGTTCTTCCTAGAGAGGAGC +
Preference number: 3 (lower is better)
Translates to: LRNRRCYFALVCKPNRLPTLSHS*FFLERS
Trigger: GCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGT...GGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp GACCAGAATCCCTGTGACCTTTGCCAATCATTTCATTaGCGTTCTGCACTGAGCAGAGAATGCCTATCCCCC +
Preference number: 3 (lower is better)
Translates to: DQNPCDLCQSFH*RSALSRECLSP
Trigger: GGGGGATAGGCATTCTCTGCTCAGTGCAGAACGGCAATGAAATGATTGGCAAAGGTCACAGGGATTCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CCA 72 bp TCCTTGGGAATGAGGTTCGCCTGTGGACCTGGTGTGTaGATACTAGCTAGCAATAAAGCCACAGCAACTGCA +
Preference number: 3 (lower is better)
Translates to: SLGMRFACGPGV*ILASNKATATA
Trigger: TGCAGTTGCTGTGGCTTTATTGCTAGCTAGTATCCACACACCAGGTCCACAGGCGAACCTCATTCCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR-3UTR CAA 90 bp AGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCGAGTATGTGTTTCCTTaGTCAACAGAAGTTAGAACC +
Preference number: 3 (lower is better)
Translates to: SCRRILLRYLDLCCGSLREYVFP*STEVRT
Trigger: GGTTCTAACTTCTGTTGACAAAGGAAACACATACTC...GCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR GCA 72 bp AAGCTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTaGAAACCTAATAGGCTTCCCTATTCTGCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: KLRNRRCYFALV*KPNRLPYSALP
Trigger: AGGAAGGGCAGAATAGGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 72 bp CGCCCCCAGCCAGGTCTGGCCGGCGGCGGCTGGGTGTaGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RPQPGLAGGGWV*GAWPASHVCAP
Trigger: AGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGCTGGGGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp GGCGGCGGCTGGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTTGGCTGGCCGGCGGCGGCTaGGTGTTGGGTGCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: GGGWVLGAWPASHVCAPWLAGGG*VLGAWP
Trigger: CGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAG...CCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 72 bp GCCAGGTCTGGCCGGCGGCGGCTGGGTGTTGGGTGCTaGGCCGGCCTCACACGTGTGTGCTCCTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: ARSGRRRLGVGC*AGLTRVCSLGM
Trigger: CATTCCCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCCGGCCAGACCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CCTAGCGAGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGAATCCTGGAGTCCGGTaGGTGCGGAGCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PSEAGGLDFCAQESWSPVNPGVR*VRSPPR
Trigger: TCTGGGAGGGCTCCGCACTCACCGGACTCCAGGATT...CACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp GGCGGCGGCTGGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTTGGCGAGGGGATGCCCATTaGTGGGAACTCCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GGGWVLGAWPASHVCAPWRGDAH*WELPAS
Trigger: ACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCG...CCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp GGTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTGCTCTCGGAGCACCGGGTaGAGGCTCTGTGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GECGALPDCQATSLAQSCSRSTG*RLCAEA
Trigger: CGCCTCTGCACAGAGCCTGCACCCGGTGCTCCGAGA...GCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCGGGCTCCTAGGAGGGCCGAAGTaGGGTCGCGCGGAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: RRILLRYLDLCCGSLRGLLGGPK*GRAEGR
Trigger: GCGACCTTCCGCGCGACCTCACTTCGGCCCTCCTAG...GAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp GTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTGCCGGAGGTGAACCGAAATaGGAGGCGCTGGCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: VSAEPSQTVRPPLWPRVAGGEPK*EALAQS
Trigger: CGACTGGGCCAGCGCCTCCCATTTCGGTTCACCTCC...GGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp TCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACTAGTTGAGCCCAGTTCGCCGTaGTCCGGGGGCTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: SRREGRKLRNRRCYFALVEPSSP*SGGSRS
Trigger: GCTCCGAGAGCCCCCGGATCACGGCGAACTGGGCTC...AACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CCTAGCGAGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGTGTGCTCCTTGGGAATaGGGTTCGCCTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: PSEAGGLDFCAQESWSPVCAPWE*GSPVDL
Trigger: CAGGTCCACAGGCGAACCTCATTCCCAAGGAGCACA...CACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCGGGCTCAAGAGAAATCCGCGCTaGTCCCAGTGCGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: RRILLRYLDLCCGSLRGLKRNPR*SQCGRP
Trigger: CGGCCGGCCGCACTGGGAGCAGCGCGGATTTCTCTT...GAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCGCTGGTCCAGGGGGCTaGTGGCCAGTGTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGAGPGG*WPVWRT
Trigger: GGTCCTCCACACTGGCCACCAGCCCCCTGGACCAGC...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CCTAGCGAGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGGAGGTGGTACGCGGATaGACCAGAATCCCTGTGACC +
Preference number: 4 (lower is better)
Translates to: PSEAGGLDFCAQESWSPVEVVRG*TRIPVT
Trigger: GGTCACAGGGATTCTGGTCCATCCGCGTACCACCTC...CACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGAGTGCGGAGCCCTCCCAGGCTGGATCGTCGCTGTaGGCTTCCACCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LDFCAQESWSPVSAEPSQAGSSL*ASTSCA
Trigger: AGCACAGCTGGTGGAAGCCCACAGCGACGATCCAGC...CTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp GTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTGCCGAGGGAGACACAGTGTaGTGGACCAGAGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VSAEPSQTVRPPLWPRVAEGDTV*WTRGLA
Trigger: TGCCAGGCCTCTGGTCCACCACACTGTGTCTCCCTC...GGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CTGTGCTTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCCAGCTGGAGGTGGGGTaGGTCCCCCGTGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCLSETPRQLPTSPHTDSQLEVG*VPRVPA
Trigger: TGCTGGAACACGGGGGACTCACCCCACCTCCAGCTG...GCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp AAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGCGGCCAGCAGTGGATGATCGCACCCAGTTaGAGGTCTTCGCGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: KLCLQQLRLKAGLGGQQWMIAPS*RSSRPG
Trigger: GCCCGGGCGCGAAGACCTGCAACTGGGTGCGATCAT...CCACTGCTGGCCGCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp AGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCCGGGTGCAGGCTCTGTaGAGAGGCGGCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SCRRILLRYLDLCCGSLRRVQAL*RGGSWR
Trigger: CCTCCAGCTGCCGCCTCTGCACAGAGCCTGCACCCG...GCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp AAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGCGGCCAGCAGTGGCCCCGTCGCTCAGACTaGTCACCCAGTGATGCCCGA +
Preference number: 4 (lower is better)
Translates to: KLCLQQLRLKAGLGGQQWPRRSD*SPSDAR
Trigger: TCGGGCATCACTGGGTGACCAGTCTGAGCGACGGGG...CCACTGCTGGCCGCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp GTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTGCCCGATCTTGTCAATGCTaGTCGGGCTCCCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: VSAEPSQTVRPPLWPRVARSCQC*SGSLWT
Trigger: CGTCCACAGGGAGCCCGACCAGCATTGACAAGATCG...GGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp AAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGCGGCCAGCAGTGGTGCGCGCAGGAATCCTaGAGTCCGGTGAGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: KLCLQQLRLKAGLGGQQWCAQES*SPVSAE
Trigger: CTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCA...CCACTGCTGGCCGCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 72 bp GTTGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTaGGGAATGAGGTTCGCCTGTGGACCTGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VGCLAGLTRVCS*GMRFACGPGVW
Trigger: CCACACACCAGGTCCACAGGCGAACCTCATTCCCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CCTAGCGAGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGCTAGGGAGGTGGAACTaGGAATGCTGTAGGGATTCG +
Preference number: 4 (lower is better)
Translates to: PSEAGGLDFCAQESWSPVLGRWN*ECCRDS
Trigger: CGAATCCCTACAGCATTCTCAGTTCCACCTCCCTAG...CACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCGGGCTCAAAGGACTCCCCTGCTaGATGCCCGCAGAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: RRILLRYLDLCCGSLRGLKGLPC*MPAESA
Trigger: TGCGGACTCTGCGGGCATGCAGCAGGGGAGTCCTTT...GAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CCTAGCGAGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGGAAGTTTCTGAGGGTTaGGGAAAGGACTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSEAGGLDFCAQESWSPVEVSEG*GKDSPA
Trigger: AGCAGGGGAGTCCTTTCCGCAACCCTCAGAAACTTC...CACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp GTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTGCCGGCCTCACACGTGTGTaGTCCTTGGGAATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VSAEPSQTVRPPLWPRVAGLTRV*SLGMRF
Trigger: GAACCTCATTCCCAAGGAGCACACACGTGTGAGGCC...GGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp AAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATACATGGCGGCTGGGTGTTGGGTaGTTGGCCGGCCTCACACGT +
Preference number: 4 (lower is better)
Translates to: KRRDSSPRAHTQTAVYTWRLGVG*LAGLTR
Trigger: ACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCG...CCATGTATATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CCCCACGTTATCCCACTCCTTGTTCTTCCTAGAGAGGAGCGACCAAACAAACCTCGGCCAGCAGTGGCGTaGAGCGCCCCCAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PHVIPLLVLPREERPNKPRPAVA*SAPSQV
Trigger: GACCTGGCTGGGGGCGCTGCACGCCACTGCTGGCCG...AGGTTTGTTTGGTCGCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp AAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATACATGGGTGTGCGGTGAGTGGTaGGCTACGTGTGGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: KRRDSSPRAHTQTAVYTWVCGEW*ATCGER
Trigger: CCGCTCGCCACACGTAGCCCACCACTCACCGCACAC...CCATGTATATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp TTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATGCAGAGGCGGCAGCTaGAGGTGGGGTGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LSETPRQLPTSPHTDSGICRGGS*RWGESP
Trigger: GGGGGACTCACCCCACCTCCAGCTGCCGCCTCTGCA...TATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp AAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCCGGACTAGGCGGCCAGCAGTGGGTCAGGCCACCTCTTTaGCCCAGAGTTGCCGCCGAA +
Preference number: 4 (lower is better)
Translates to: KLCLQQLRLKAGLGGQQWVRPPL*PRVAAE
Trigger: TTCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGAC...CCACTGCTGGCCGCCTAGTCCGGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CTGTGCTTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGCGAGGCTGGGGGCCTaGATTTCTGCGCGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LCLSETPRQLPTSPHTDSARLGA*ISARRN
Trigger: ATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGC...GCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp GCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTGGGTGTTGGGTGCTTaGCCGGCCTCACACGTGTGT +
Preference number: 4 (lower is better)
Translates to: AWQLILTHPRQPGRAFWSWVLGA*PASHVC
Trigger: ACACACGTGTGAGGCCGGCCAAGCACCCAACACCCA...GGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CTCTTTGGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGGCGGCGGCTGGGTGTTaGGTGCTTGGCCGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LFGPELPPNPSQIPRSMLAAAGC*VLGRPH
Trigger: GTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGC...CAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 72 bp GAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTaGGCCCAGAGTTGCCGCCGAATCCTTCTCAGATAC +
Preference number: 4 (lower is better)
Translates to: ECGALPDCQATS*AQSCRRILLRY
Trigger: GTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CTGTGCTTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGTGGTTAGTGTGCGGTaGGTGGTGGGCTACGTGTGG +
Preference number: 4 (lower is better)
Translates to: LCLSETPRQLPTSPHTDSVVSVR*VVGYVW
Trigger: CCACACGTAGCCCACCACTCACCGCACACTAACCAC...GCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp GCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCGGGGAGCCAGGAATATaGGATCCCAGCTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: AWQLILTHPRQPGRAFWSGEPGI*DPSLDC
Trigger: GCAGTCCAAGCTGGGATCTCATATTCCTGGCTCCCC...GGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp TCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACTAGTTCAGTGTGGAGGACCATaGGCCCCCGTCGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: SRREGRKLRNRRCYFALVQCGGP*APVAQT
Trigger: AGTCTGAGCGACGGGGGCCCATGGTCCTCCACACTG...AACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTAGACTGGTCACCCAGTaGTGCCCGAGGGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: QLILTHPRQPGRAFWSLGRLVTQ*CPRGCP
Trigger: TGGGCATCCCCTCGGGCATCACTGGGTGACCAGTCT...ACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp AAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATACATGGACCTCATGCGGCTGCTaGTCCCCTGGCGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: KRRDSSPRAHTQTAVYTWTSCGC*SPGGVI
Trigger: AATGACTCCGCCAGGGGATCAGCAGCCGCATGAGGT...CCATGTATATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTCTGGAGTCCGGTGAGTaGGGAGCCCTCCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: QLILTHPRQPGRAFWSLGLESGE*GALPDC
Trigger: ACAGTCTGGGAGGGCTCCGCACTCACCGGACTCCAG...ACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp TCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACTAGTTGGGGGCCTGGATTTCTaGGCGCAGGAATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRREGRKLRNRRCYFALVGGLDF*AQESWS
Trigger: ACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCC...AACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp TCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACTAGTTAGGCAGCTGTGGCCATaGTCGGTGAGGATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: SRREGRKLRNRRCYFALVRQLWP*SVRIPY
Trigger: GTAGGGGATCCTCACCGACCATGGCCACAGCTGCCT...AACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp ACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACGTGGTGGGCTACGTGTaGCGAGCGGTGATGGATGAT +
Preference number: 4 (lower is better)
Translates to: TLPGGRAESCEIAAATSHVVGYV*RAVMDD
Trigger: ATCATCCATCACCGCTCGCCACACGTAGCCCACCAC...GTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTCCCCAGGCGTTGGGGTaGTTAGTGTGCGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: QLILTHPRQPGRAFWSLGPQALG*LVCGEW
Trigger: CCACTCACCGCACACTAACCACCCCAACGCCTGGGG...ACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp GGCGGCGGCTGGGTGTTGGGTGCTTGGCCGGCCTCACACGTGTGTGCTCCTTGGGTCGGCAGAAATATTTaGGTTAACTCAGGTTCGAAC +
Preference number: 4 (lower is better)
Translates to: GGGWVLGAWPASHVCAPWVGRNI*VNSGSN
Trigger: GTTCGAACCTGAGTTAACCCAAATATTTCTGCCGAC...CCAAGGAGCACACACGTGTGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCGGGCTCTGTGGCCATGGTCGGTaGGGATCCCCTACTAGTTAT +
Preference number: 4 (lower is better)
Translates to: RRILLRYLDLCCGSLRGLCGHGR*GSPTSY
Trigger: ATAACTAGTAGGGGATCCTCACCGACCATGGCCACA...GAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp TTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATAACGTGTGGCGAGCGGTaGTGGATGATCGCACCCAGT +
Preference number: 4 (lower is better)
Translates to: LSETPRQLPTSPHTDSGITCGER*WMIAPS
Trigger: ACTGGGTGCGATCATCCATCACCGCTCGCCACACGT...TATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp TCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTCTTCGACCTGCAGCTaGGGGAGACACAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SRREGRKLRNRRCYFALVSSTCS*GRHSVV
Trigger: CACCACACTGTGTCTCCCTCAGCTGCAGGTCGAAGA...AACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCGGGCTCTCTTTGGCCCAGAGTTaGCGCCGAATCCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RRILLRYLDLCCGSLRGLSLAQS*RRILLR
Trigger: TCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGA...GAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CTGTGCTTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCCAACTCATCAGAGGTTaGCGTCTCCTCGTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: LCLSETPRQLPTSPHTDSQLIRG*RLLVGV
Trigger: CACTCCGACGAGGAGACGCCAACCTCTGATGAGTTG...GCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCCGGCTGCTGATCCCCTaGCGGAGTCATTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGRLLIP*RSHSFL
Trigger: GAGAAAAGAATGACTCCGCCAGGGGATCAGCAGCCG...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTGCAAACCTAATAGGCTTCCCCGAAATGGGAGGCGCTaGCCCAGTCGCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: LRNRRCYFALVCKPNRLPRNGRR*PSRQRL
Trigger: GAGACGCTGGCGACTGGGCCAGCGCCTCCCATTTCG...GGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCACAGCGGTATATACATaGGGGGAGAGGTGGTACGCG +
Preference number: 4 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGTAVYT*GERWYA
Trigger: CGCGTACCACCTCTCCCCCCATGTATATACCGCTGT...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp GCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCCTTTGGAGAAGTTTCTaGGGGTTGCGGAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: AWQLILTHPRQPGRAFWSLWRSF*GLRKGL
Trigger: GAGTCCTTTCCGCAACCCTCAGAAACTTCTCCAAAG...GGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CCCCACGTTATCCCACTCCTTGTTCTTCCTAGAGAGGAGCGACCAAACAAACCTGAGGGGTTGGCCGCTTaGCGTGATAGACGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: PHVIPLLVLPREERPNKPEGLAA*RDRRVR
Trigger: CCGAACCCGTCTATCACGTCAAGCGGCCAACCCCTC...AGGTTTGTTTGGTCGCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTGCAAACCTAATAGGCTTCCCGCTGCGAGTACACGTTaGGGGGTTGGCCGCTTGACG +
Preference number: 4 (lower is better)
Translates to: LRNRRCYFALVCKPNRLPAASTR*GVGRLT
Trigger: CGTCAAGCGGCCAACCCCTCAACGTGTACTCGCAGC...GGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CTGTGCTTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCCAGGCTTGGGACACTTaGGGAAATGCGTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LCLSETPRQLPTSPHTDSQAWDT*GNASPV
Trigger: TACTGGAGACGCATTTCCTCAAGTGTCCCAAGCCTG...GCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp ACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACAGCGTCTCCGGGTCGTaGTCTCCAGTGAAAGTAATC +
Preference number: 4 (lower is better)
Translates to: TLPGGRAESCEIAAATSHSVSGS*SPVKVI
Trigger: GATTACTTTCACTGGAGATCACGACCCGGAGACGCT...GTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp TTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATAACTCAGAGGGGGCGGTaGACTGGAGGTGAACCGAAA +
Preference number: 4 (lower is better)
Translates to: LSETPRQLPTSPHTDSGITQRGR*TGGEPK
Trigger: TTTCGGTTCACCTCCAGTTCACCGCCCCCTCTGAGT...TATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTGCAAACCTAATAGGCTTCCCGACTCCCCTGCTGCATaGCCGCAGAGTCCGCATGGA +
Preference number: 4 (lower is better)
Translates to: LRNRRCYFALVCKPNRLPDSPAA*PQSPHG
Trigger: TCCATGCGGACTCTGCGGGCATGCAGCAGGGGAGTC...GGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCGCTAAAGGGAACTGTTaGCCGGGGAGCCAGGAATAT +
Preference number: 4 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGAKGNC*PGSQEY
Trigger: ATATTCCTGGCTCCCCGGGCAACAGTTCCCTTTAGC...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTAGATACCTCGATCTATaGTGCGGTAGCCTGCGCGGG +
Preference number: 4 (lower is better)
Translates to: QLILTHPRQPGRAFWSLGRYLDL*CGSLRG
Trigger: CCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCT...ACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CCTAGCGAGGCTGGGGGCCTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGAATCCCTGTGACCTTTaGCAATCATTTCATTGCCGT +
Preference number: 4 (lower is better)
Translates to: PSEAGGLDFCAQESWSPVNPCDL*QSFHCR
Trigger: ACGGCAATGAAATGATTGGCAAAGGTCACAGGGATT...CACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp TCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACTAGTTCCGGGCCGGGCTTTCTaGTCCTTAGGTAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SRREGRKLRNRRCYFALVPGRAF*SLGSLK
Trigger: CTTCAAACTACCTAAGGACCAGAAAGCCCGGCCCGG...AACTAGTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCGGTGGACCAGAGGCCTaGCAACTCATACTAACGCAT +
Preference number: 4 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGGGPEA*QLILTH
Trigger: ATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACC...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
3UTR CAA 72 bp CGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTAGTTaGAAGCTTTGTCTACAGCAGCTGCGCCTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: RQPGRAFWSLGS*KLCLQQLRLKA
Trigger: GGCCTTTAGGCGCAGCTGCTGTAGACAAAGCTTCAAACTACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGAGTGCGGAGCCCTCCCAGTACTTCGCACTAGTTTaGAAACCTAATAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LDFCAQESWSPVSAEPSQYFALV*KPNRLP
Trigger: GGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTA...CTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CCCCACGTTATCCCACTCCTTGTTCTTCCTAGAGAGGAGCGACCAAACAAACCTTACCTCGATCTATGCTaGGGTAGCCTGCGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: PHVIPLLVLPREERPNKPYLDLC*GSLRGL
Trigger: GAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTA...AGGTTTGTTTGGTCGCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CTCTTTGGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGTTAGTGTGCGGTGAGTaGTGGGCTACGTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: LFGPELPPNPSQIPRSMLLVCGE*WATCGE
Trigger: CTCGCCACACGTAGCCCACCACTCACCGCACACTAA...CAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp GGAGCCAGGAATATGAGATCCCAGCTTGGACTGCTTAATGTAACTGTGTATCAGGGCGGCAGCTGGAGGTaGGGTGAGTCCCCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: GARNMRSQLGLLNVTVYQGGSWR*GESPVF
Trigger: GAACACGGGGGACTCACCCCACCTCCAGCTGCCGCC...CTGATACACAGTTACATTAAGCAGTCCAAGCTGGGATCTCATATTCCTGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp ACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACAATGAGGTTCGCCTGTaGACCTGGTGTGTGGATACT +
Preference number: 4 (lower is better)
Translates to: TLPGGRAESCEIAAATSHNEVRL*TWCVDT
Trigger: AGTATCCACACACCAGGTCCACAGGCGAACCTCATT...GTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTATTGCCGTTCTGCACTaGGCAGAGAATGCCTATCCC +
Preference number: 4 (lower is better)
Translates to: QLILTHPRQPGRAFWSLGIAVLH*AENAYP
Trigger: GGGATAGGCATTCTCTGCTCAGTGCAGAACGGCAAT...ACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CCCCACGTTATCCCACTCCTTGTTCTTCCTAGAGAGGAGCGACCAAACAAACCTCAACTGGAGGCTGTCTaGCAGCGAGGAGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PHVIPLLVLPREERPNKPQLEAV*QRGDLL
Trigger: CAGGAGATCTCCTCGCTGGCAGACAGCCTCCAGTTG...AGGTTTGTTTGGTCGCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp AACCAAGGCGCTGAAAGGTTATTCAGAGGCACACATCTGTCTTCCCAATCCCTCTATGCTGCGGTAGCCTaGGCGGGCTCCACACTTCCA +
Preference number: 4 (lower is better)
Translates to: NQGAERLFRGTHLSSQSLYAAVA*AGSTLP
Trigger: TGGAAGTGTGGAGCCCGCGCAGGCTACCGCAGCATA...GAGGGATTGGGAAGACAGATGTGTGCCTCTGAATAACCTTTCAGCGCCTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp AACCAAGGCGCTGAAAGGTTATTCAGAGGCACACATCTGTCTTCCCAATCCCTCCCCGCAGAGTCCGCATaGACTAGGGAGGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: NQGAERLFRGTHLSSQSLPAESA*TREVEL
Trigger: CAGTTCCACCTCCCTAGTCCATGCGGACTCTGCGGG...GAGGGATTGGGAAGACAGATGTGTGCCTCTGAATAACCTTTCAGCGCCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTTACACGTTGAGGGGTTaGCCGCTTGACGTGATAGAC +
Preference number: 4 (lower is better)
Translates to: QLILTHPRQPGRAFWSLGYTLRG*PLDVID
Trigger: GTCTATCACGTCAAGCGGCCAACCCCTCAACGTGTA...ACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CCCCACGTTATCCCACTCCTTGTTCTTCCTAGAGAGGAGCGACCAAACAAACCTGGAGACACAGTGTGGTaGACCAGAGGCCTGGCAACT +
Preference number: 4 (lower is better)
Translates to: PHVIPLLVLPREERPNKPGDTVW*TRGLAT
Trigger: AGTTGCCAGGCCTCTGGTCCACCACACTGTGTCTCC...AGGTTTGTTTGGTCGCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp AACCAAGGCGCTGAAAGGTTATTCAGAGGCACACATCTGTCTTCCCAATCCCTCACGGTGAAGCCAGGCTaGGAGTACACGTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NQGAERLFRGTHLSSQSLTVKPG*EYTLRG
Trigger: ACCCCTCAACGTGTACTCGCAGCCTGGCTTCACCGT...GAGGGATTGGGAAGACAGATGTGTGCCTCTGAATAACCTTTCAGCGCCTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp GGAGCCAGGAATATGAGATCCCAGCTTGGACTGCTTAATGTAACTGTGTATCAGAGCGAGGAGATCTCCTaGGCGGCAGGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: GARNMRSQLGLLNVTVYQSEEIS*AAGLGH
Trigger: GTGTCCCAAGCCTGCCGCGCAGGAGATCTCCTCGCT...CTGATACACAGTTACATTAAGCAGTCCAAGCTGGGATCTCATATTCCTGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp ACACAGTGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACTGCGAAATCGCCGCTaGTACTTCGCACTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: TQCGGPEAWQLILTHPRQLRNRR*YFALVC
Trigger: GCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAG...TTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACACTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp GGAGCCAGGAATATGAGATCCCAGCTTGGACTGCTTAATGTAACTGTGTATCAGGCGGTGAACTGGAGGTaGACCGAAATGGGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GARNMRSQLGLLNVTVYQAVNWR*TEMGGA
Trigger: AGCGCCTCCCATTTCGGTTCACCTCCAGTTCACCGC...CTGATACACAGTTACATTAAGCAGTCCAAGCTGGGATCTCATATTCCTGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CTAGCAATAAAGCCACAGCAACTGCATATTTTTGGGATCTCTACACAGCCTAGCCGGAAAGGACTCCCCTaGTGCATGCCCGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LAIKPQQLHIFGISTQPSRKGLP*CMPAES
Trigger: GGACTCTGCGGGCATGCAGCAGGGGAGTCCTTTCCG...GCTAGGCTGTGTAGAGATCCCAAAAATATGCAGTTGCTGTGGCTTTATTGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp AGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCCACCTGAAATACAGCTaGTATAACCAAGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: SCRRILLRYLDLCCGSLRHLKYS*YNQGAE
Trigger: TTCAGCGCCTTGGTTATAGCAGCTGTATTTCAGGTG...GCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTGCAAACCTAATAGGCTTCCCGGCTTCCACCAGCTGTaGTTATCAGAAACGCCGAGA +
Preference number: 4 (lower is better)
Translates to: LRNRRCYFALVCKPNRLPGFHQL*LSETPR
Trigger: TCTCGGCGTTTCTGATAAGCACAGCTGGTGGAAGCC...GGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CTGCGAAATCGCCGCTGCTACTTCGCACTAGTTTGCAAACCTAATAGGCTTCCCGGGGATGCCCATTGCTaGGAACTCCCTGCAAGTAAT +
Preference number: 4 (lower is better)
Translates to: LRNRRCYFALVCKPNRLPGDAHC*ELPASN
Trigger: ATTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCC...GGGAAGCCTATTAGGTTTGCAAACTAGTGCGAAGTAGCAGCGGCGATTTCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp ACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACTGTGGACCTGGTGTGTaGATACTAGCTAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: TLPGGRAESCEIAAATSHCGPGV*ILASNK
Trigger: TTTATTGCTAGCTAGTATCCACACACCAGGTCCACA...GTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CTAGCAATAAAGCCACAGCAACTGCATATTTTTGGGATCTCTACACAGCCTAGCGCGAGCGGTGATGGATaGTCGCACCCAGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LAIKPQQLHIFGISTQPSASGDG*SHPVAG
Trigger: ACCTGCAACTGGGTGCGATCATCCATCACCGCTCGC...GCTAGGCTGTGTAGAGATCCCAAAAATATGCAGTTGCTGTGGCTTTATTGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CTAGCAATAAAGCCACAGCAACTGCATATTTTTGGGATCTCTACACAGCCTAGCGTCTCCTCGTCGGAGTaGTCCTGGCAATGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: LAIKPQQLHIFGISTQPSVSSSE*SWQWCE
Trigger: CTCGCACCATTGCCAGGATCACTCCGACGAGGAGAC...GCTAGGCTGTGTAGAGATCCCAAAAATATGCAGTTGCTGTGGCTTTATTGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp CTCTTTGGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGGAAGGGTCCGGGATTTaGATTAACACATGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LFGPELPPNPSQIPRSMLEGSGI*INTCSS
Trigger: CGAAGAGCATGTGTTAATTCAAATCCCGGACCCTTC...CAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp GGAGCCAGGAATATGAGATCCCAGCTTGGACTGCTTAATGTAACTGTGTATCAGGGGAGGGCAGAAAGCTaGGAAATCGCCGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: GARNMRSQLGLLNVTVYQGRAES*EIAAAT
Trigger: AGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCC...CTGATACACAGTTACATTAAGCAGTCCAAGCTGGGATCTCATATTCCTGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp TTATCAGAAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATGCCAATCATTTCATTaGCGTTCTGCACTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSETPRQLPTSPHTDSGICQSFH*RSALSR
Trigger: TCTGCTCAGTGCAGAACGGCAATGAAATGATTGGCA...TATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTTCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp AGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCATTGAGAAGCCTGAATaGGAGAGTATGTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SCRRILLRYLDLCCGSLRIEKPE*ESMCFL
Trigger: AAGGAAACACATACTCTCTCATTCAGGCTTCTCAAT...GCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CCA 90 bp CTCTTTGGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGTCCAGTCAGAGATCATaGCAAGATGTGTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LFGPELPPNPSQIPRSMLSSQRS*QDVSVF
Trigger: GAAAACAGACACATCTTGCCATGATCTCTGACTGGA...CAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR TCA 90 bp AACCAAGGCGCTGAAAGGTTATTCAGAGGCACACATCTGTCTTCCCAATCCCTCGAAAGTAATCGCGTGTaGAGGCAAAGTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NQGAERLFRGTHLSSQSLESNRV*RQSLSS
Trigger: AGAGGAAAGACTTTGCCTTCACACGCGATTACTTTC...GAGGGATTGGGAAGACAGATGTGTGCCTCTGAATAACCTTTCAGCGCCTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR GCA 90 bp CTAGCAATAAAGCCACAGCAACTGCATATTTTTGGGATCTCTACACAGCCTAGCATTTCATTGCCGTTCTaGACTGAGCAGAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: LAIKPQQLHIFGISTQPSISLPF*TEQRMP
Trigger: AGGCATTCTCTGCTCAGTGCAGAACGGCAATGAAAT...GCTAGGCTGTGTAGAGATCCCAAAAATATGCAGTTGCTGTGGCTTTATTGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 90 bp GCAGGTCTTCGCGCCCGGGCTTCACGTCCTGCTGGTCCAGGGGGCTaGTGGCCAGTGTGGAGGACCATGGGCCCCCGTCGCTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: AGLRARASRPAGPGG*WPVWRTMGPRRSDW
Trigger: CCAGTCTGAGCGACGGGGGCCCATGGTCCTCCACACTGGCCACCAGCCCCCTGGACCAGCAGGACGTGAAGCCCGGGCGCGAAGACCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 90 bp CACGTCCTGCTGGTCCAGGGGGCTGGTGGCCAGTGTGGAGGACCATaGGCCCCCGTCGCTCAGACTGGTCACCCAGTGATGCCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: HVLLVQGAGGQCGGP*APVAQTGHPVMPEG
Trigger: CCCCTCGGGCATCACTGGGTGACCAGTCTGAGCGACGGGGGCCCATGGTCCTCCACACTGGCCACCAGCCCCCTGGACCAGCAGGACGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 90 bp GGGCTCTCGGAGCACCGGGTGCAGGCTCTGTGCAGAGGCGGCAGCTaGAGGTGGGGTGAGTCCCCCGTGTTCCAGCATGCCGCTCACGGT +
Preference number: 5 (lower is better)
Translates to: GLSEHRVQALCRGGS*RWGESPVFQHAAHG
Trigger: ACCGTGAGCGGCATGCTGGAACACGGGGGACTCACCCCACCTCCAGCTGCCGCCTCTGCACAGAGCCTGCACCCGGTGCTCCGAGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp GGTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTGCGGCGGCGGCTGGGTGTaGGGTGCTTGGCCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GECGALPDCQATSLAQSCGGGWV*GAWPAS
Trigger: TGAGGCCGGCCAAGCACCCAACACCCAGCCGCCGCC...GCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp CTGGATTTCTGCGCGCAGGAATCCTGGAGTCCGGTGAGTGCGGAGCCCTCCCAGCTGGGTGTTGGGTGCTaGGCCGGCCTCACACGTGTG +
Preference number: 5 (lower is better)
Translates to: LDFCAQESWSPVSAEPSQLGVGC*AGLTRV
Trigger: CACACGTGTGAGGCCGGCCAAGCACCCAACACCCAG...CTGGGAGGGCTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS TCA 90 bp GGGTGGTTAGTGTGCGGTGAGTGGTGGGCTACGTGTGGCGAGCGGTaGTGGATGATCGCACCCAGTTGCAGGTCTTCGCGCCCGGGCTTC +
Preference number: 5 (lower is better)
Translates to: GWLVCGEWWATCGER*WMIAPSCRSSRPGF
Trigger: GAAGCCCGGGCGCGAAGACCTGCAACTGGGTGCGATCATCCATCACCGCTCGCCACACGTAGCCCACCACTCACCGCACACTAACCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp ACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACGATGATCGCACCCAGTaGCAGGTCTTCGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: TLPGGRAESCEIAAATSHDDRTQ*QVFAPG
Trigger: CCCGGGCGCGAAGACCTGCAACTGGGTGCGATCATC...GTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp GGTGAGTGCGGAGCCCTCCCAGACTGTCAGGCCACCTCTTTGGCCCAGAGTTGCCTCTTTGGCCCAGAGTaGCCGCCGAATCCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: GECGALPDCQATSLAQSCLFGPE*PPNPSQ
Trigger: CTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAG...GCAACTCTGGGCCAAAGAGGTGGCCTGACAGTCTGGGAGGGCTCCGCACTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp CGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCGGGCTCTGTCAGGCCACCTCTTaGGCCCAGAGTTGCCGCCGA +
Preference number: 5 (lower is better)
Translates to: RRILLRYLDLCCGSLRGLCQATS*AQSCRR
Trigger: TCGGCGGCAACTCTGGGCCAAAGAGGTGGCCTGACA...GAGCCCGCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS TCA 90 bp CCTGCTGCATGCCCGCAGAGTCCGCATGGACTAGGGAGGTGGAACTaGGAATGCTGTAGGGATTCGAGGCAGCTGTGGCCATGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: PAACPQSPHGLGRWN*ECCRDSRQLWPWSV
Trigger: CACCGACCATGGCCACAGCTGCCTCGAATCCCTACAGCATTCTCAGTTCCACCTCCCTAGTCCATGCGGACTCTGCGGGCATGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp ACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACCCGAGGGGATGCCCATaGCTGGGAACTCCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TLPGGRAESCEIAAATSHPRGCP*LGTPCK
Trigger: CTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGG...GTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp AAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATACATGGGGCTGCGAGTACACGTaGAGGGGTTGGCCGCTTGAC +
Preference number: 5 (lower is better)
Translates to: KRRDSSPRAHTQTAVYTWGCEYT*RGWPLD
Trigger: GTCAAGCGGCCAACCCCTCAACGTGTACTCGCAGCC...CCATGTATATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp ACACTTCCAGGAGGGAGGGCAGAAAGCTGCGAAATCGCCGCTGCTACTTCGCACCCAACTCATCAGAGGTaGGCGTCTCCTCGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: TLPGGRAESCEIAAATSHPTHQR*ASPRRS
Trigger: ACTCCGACGAGGAGACGCCAACCTCTGATGAGTTGG...GTGCGAAGTAGCAGCGGCGATTTCGCAGCTTTCTGCCCTCCCTCCTGGAAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp AGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCGGTAGCCTGCGCCCCTGTGCAGCGATCTaGTCAATGCTGGTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SCRRILLRYLDLCCGSLRPCAAI*SMLVGL
Trigger: GAGCCCGACCAGCATTGACAAGATCGCTGCACAGGG...GCGCAGGCTACCGCAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp GCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCACGTTATCCCACTCCTaGTTCTTCCTAGAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: AWQLILTHPRQPGRAFWSTLSHS*FFLERS
Trigger: GCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGT...GGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS GCA 90 bp TGGGAACTCCCTGCAAGTAATCACTTTGGAGAAGTTTCTGAGGGTTaGGGAAAGGACTCCCCTGCTGCATGCCCGCAGAGTCCGCATGGA +
Preference number: 5 (lower is better)
Translates to: WELPASNHFGEVSEG*GKDSPAACPQSPHG
Trigger: TCCATGCGGACTCTGCGGGCATGCAGCAGGGGAGTCCTTTCCGCAACCCTCAGAAACTTCTCCAAAGTGATTACTTGCAGGGAGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS GCA 90 bp CGTCGCTCAGACTGGTCACCCAGTGATGCCCGAGGGGATGCCCATTaGTGGGAACTCCCTGCAAGTAATCACTTTGGAGAAGTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: RRSDWSPSDARGDAH*WELPASNHFGEVSE
Trigger: CTCAGAAACTTCTCCAAAGTGATTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGTCTGAGCGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 90 bp CGCTCAGACTGGTCACCCAGTGATGCCCGAGGGGATGCCCATTGCTaGGAACTCCCTGCAAGTAATCACTTTGGAGAAGTTTCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: RSDWSPSDARGDAHC*ELPASNHFGEVSEG
Trigger: ACCCTCAGAAACTTCTCCAAAGTGATTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGTCTGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp AAACGCCGAGACAGCTCCCCACGAGCCCACACACAGACAGCGGTATATACATGGTTGCCAATCATTTCATaGCCGTTCTGCACTGAGCAG +
Preference number: 5 (lower is better)
Translates to: KRRDSSPRAHTQTAVYTWLPIIS*PFCTEQ
Trigger: CTGCTCAGTGCAGAACGGCAATGAAATGATTGGCAA...CCATGTATATACCGCTGTCTGTGTGTGGGCTCGTGGGGAGCTGTCTCGGCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp CCCCACGTTATCCCACTCCTTGTTCTTCCTAGAGAGGAGCGACCAAACAAACCTACACGTGTGTGCTCCTaGGGAATGAGGTTCGCCTGT +
Preference number: 5 (lower is better)
Translates to: PHVIPLLVLPREERPNKPTRVCS*GMRFAC
Trigger: ACAGGCGAACCTCATTCCCAAGGAGCACACACGTGT...AGGTTTGTTTGGTCGCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCCTGCAAGTAATCACTTaGGAGAAGTTTCTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGLQVIT*EKFLRV
Trigger: AACCCTCAGAAACTTCTCCAAAGTGATTACTTGCAG...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp AACCAAGGCGCTGAAAGGTTATTCAGAGGCACACATCTGTCTTCCCAATCCCTCGCAGGCTTGGGACACTaGAGGAAATGCGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: NQGAERLFRGTHLSSQSLAGLGH*RKCVSS
Trigger: ACTGGAGACGCATTTCCTCAAGTGTCCCAAGCCTGC...GAGGGATTGGGAAGACAGATGTGTGCCTCTGAATAACCTTTCAGCGCCTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp TGTGGTGGACCAGAGGCCTGGCAACTCATACTAACGCATCCTCGACAACCGGGCTGCGTGAAGCCCAACTaGATTCTTCTTTGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: CGGPEAWQLILTHPRQPGCVKPN*ILLCLN
Trigger: ATTCAAACAAAGAAGAATCAAGTTGGGCTTCACGCA...GCCCGGTTGTCGAGGATGCGTTAGTATGAGTTGCCAGGCCTCTGGTCCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp CAACTCATACTAACGCATCCTCGACAACCGGGCCGGGCTTTCTGGTCCTTAGGTTGGTCCTTAGGTAGTTaGAAGCTTTGTCTACAGCAG +
Preference number: 5 (lower is better)
Translates to: QLILTHPRQPGRAFWSLGWSLGS*KLCLQQ
Trigger: CTGCTGTAGACAAAGCTTCAAACTACCTAAGGACCA...ACCTAAGGACCAGAAAGCCCGGCCCGGTTGTCGAGGATGCGTTAGTATGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp CTCTTTGGCCCAGAGTTGCCGCCGAATCCTTCTCAGATACCTCGATCTATGCTGCTTTGTTTGAATTGTTaGGCGAACTGTTCCAACTCA +
Preference number: 5 (lower is better)
Translates to: LFGPELPPNPSQIPRSMLLCLNC*ANCSNS
Trigger: TGAGTTGGAACAGTTCGCCAAACAATTCAAACAAAG...CAGCATAGATCGAGGTATCTGAGAAGGATTCGGCGGCAACTCTGGGCCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp CCCCACGTTATCCCACTCCTTGTTCTTCCTAGAGAGGAGCGACCAAACAAACCTAACTGTGTATCAGCATaGAGAAGCCTGAATGAGAGA +
Preference number: 5 (lower is better)
Translates to: PHVIPLLVLPREERPNKPNCVSA*RSLNER
Trigger: TCTCTCATTCAGGCTTCTCAATGCTGATACACAGTT...AGGTTTGTTTGGTCGCTCCTCTCTAGGAAGAACAAGGAGTGGGATAACGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS-3UTR CAA 90 bp AACCAAGGCGCTGAAAGGTTATTCAGAGGCACACATCTGTCTTCCCAATCCCTCAGCAACTGCATATTTTaGGGATCTCTACACAGCCTA +
Preference number: 5 (lower is better)
Translates to: NQGAERLFRGTHLSSQSLSNCIF*GSLHSL
Trigger: TAGGCTGTGTAGAGATCCCAAAAATATGCAGTTGCT...GAGGGATTGGGAAGACAGATGTGTGCCTCTGAATAACCTTTCAGCGCCTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 72 bp CGCGCCCGGGCTTCACGTCCTGCTGGTCCAGGGGGCTaGTGGCCAGTGTGGAGGACCATGGGCCCCCGTCGC +
Preference number: 6 (lower is better)
Translates to: RARASRPAGPGG*WPVWRTMGPRR
Trigger: GCGACGGGGGCCCATGGTCCTCCACACTGGCCACCAGCCCCCTGGACCAGCAGGACGTGAAGCCCGGGCGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 72 bp GAGCACCGGGTGCAGGCTCTGTGCAGAGGCGGCAGCTaGAGGTGGGGTGAGTCCCCCGTGTTCCAGCATGCC +
Preference number: 6 (lower is better)
Translates to: EHRVQALCRGGS*RWGESPVFQHA
Trigger: GGCATGCTGGAACACGGGGGACTCACCCCACCTCCAGCTGCCGCCTCTGCACAGAGCCTGCACCCGGTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS TCA 72 bp GCCAGGCTGCGAGTACACGTTGAGGGGTTGGCCGCTTaGCGTGATAGACGGGTTCGGTGCCGGGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: ARLRVHVEGLAA*RDRRVRCRAGP
Trigger: GGGGCCAGCCCGGCACCGAACCCGTCTATCACGTCAAGCGGCCAACCCCTCAACGTGTACTCGCAGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 72 bp CTGGTCCAGGGGGCTGGTGGCCAGTGTGGAGGACCATaGGCCCCCGTCGCTCAGACTGGTCACCCAGTGATG +
Preference number: 6 (lower is better)
Translates to: LVQGAGGQCGGP*APVAQTGHPVM
Trigger: CATCACTGGGTGACCAGTCTGAGCGACGGGGGCCCATGGTCCTCCACACTGGCCACCAGCCCCCTGGACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CAA 90 bp GTGGTGGGCTACGTGTGGCGAGCGGTGATGGATGATCGCACCCAGTaGCAGGTCTTCGCGCCCGGGCTTCACGTCCTGCTGGTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: VVGYVWRAVMDDRTQ*QVFAPGLHVLLVQG
Trigger: CCCCTGGACCAGCAGGACGTGAAGCCCGGGCGCGAAGACCTGCAACTGGGTGCGATCATCCATCACCGCTCGCCACACGTAGCCCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS TCA 72 bp GACCATGGGCCCCCGTCGCTCAGACTGGTCACCCAGTaGTGCCCGAGGGGATGCCCATTGCTGGGAACTCCC +
Preference number: 6 (lower is better)
Translates to: DHGPPSLRLVTQ*CPRGCPLLGTP
Trigger: GGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGTCTGAGCGACGGGGGCCCATGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 72 bp CCAGTGTGGAGGACCATGGGCCCCCGTCGCTCAGACTaGTCACCCAGTGATGCCCGAGGGGATGCCCATTGC +
Preference number: 6 (lower is better)
Translates to: PVWRTMGPRRSD*SPSDARGDAHC
Trigger: GCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGTCTGAGCGACGGGGGCCCATGGTCCTCCACACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS TCA 72 bp GTGAGTGGTGGGCTACGTGTGGCGAGCGGTGATGGATaGTCGCACCCAGTTGCAGGTCTTCGCGCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: VSGGLRVASGDG*SHPVAGLRARA
Trigger: AGCCCGGGCGCGAAGACCTGCAACTGGGTGCGATCATCCATCACCGCTCGCCACACGTAGCCCACCACTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS TCA 72 bp GTGTGCGGTGAGTGGTGGGCTACGTGTGGCGAGCGGTaGTGGATGATCGCACCCAGTTGCAGGTCTTCGCGC +
Preference number: 6 (lower is better)
Translates to: VCGEWWATCGER*WMIAPSCRSSR
Trigger: GCGCGAAGACCTGCAACTGGGTGCGATCATCCATCACCGCTCGCCACACGTAGCCCACCACTCACCGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 72 bp ACGGTGAAGCCAGGCTGCGAGTACACGTTGAGGGGTTaGCCGCTTGACGTGATAGACGGGTTCGGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: TVKPGCEYTLRG*PLDVIDGFGAG
Trigger: CCCGGCACCGAACCCGTCTATCACGTCAAGCGGCCAACCCCTCAACGTGTACTCGCAGCCTGGCTTCACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CAA 72 bp TACGTGTGGCGAGCGGTGATGGATGATCGCACCCAGTaGCAGGTCTTCGCGCCCGGGCTTCACGTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: YVWRAVMDDRTQ*QVFAPGLHVLL
Trigger: CAGCAGGACGTGAAGCCCGGGCGCGAAGACCTGCAACTGGGTGCGATCATCCATCACCGCTCGCCACACGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS GCA 72 bp GTTTCTGAGGGTTGCGGAAAGGACTCCCCTGCTGCATaGCCGCAGAGTCCGCATGGACTAGGGAGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: VSEGCGKDSPAA*PQSPHGLGRWN
Trigger: GTTCCACCTCCCTAGTCCATGCGGACTCTGCGGGCATGCAGCAGGGGAGTCCTTTCCGCAACCCTCAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS TCA 72 bp TGCCCGCAGAGTCCGCATGGACTAGGGAGGTGGAACTaGGAATGCTGTAGGGATTCGAGGCAGCTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: CPQSPHGLGRWN*ECCRDSRQLWP
Trigger: TGGCCACAGCTGCCTCGAATCCCTACAGCATTCTCAGTTCCACCTCCCTAGTCCATGCGGACTCTGCGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CAA 90 bp CCCGAGGGGATGCCCATTGCTGGGAACTCCCTGCAAGTAATCACTTaGGAGAAGTTTCTGAGGGTTGCGGAAAGGACTCCCCTGCTGCAT +
Preference number: 6 (lower is better)
Translates to: PEGMPIAGNSLQVIT*EKFLRVAERTPLLH
Trigger: ATGCAGCAGGGGAGTCCTTTCCGCAACCCTCAGAAACTTCTCCAAAGTGATTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS GCA 72 bp GACTGGTCACCCAGTGATGCCCGAGGGGATGCCCATTaGTGGGAACTCCCTGCAAGTAATCACTTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: DWSPSDARGDAH*WELPASNHFGE
Trigger: TTCTCCAAAGTGATTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CCA 72 bp TGGTCACCCAGTGATGCCCGAGGGGATGCCCATTGCTaGGAACTCCCTGCAAGTAATCACTTTGGAGAAGTT +
Preference number: 6 (lower is better)
Translates to: WSPSDARGDAHC*ELPASNHFGEV
Trigger: AACTTCTCCAAAGTGATTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644024.2
CDS CAA 72 bp ATGCCCATTGCTGGGAACTCCCTGCAAGTAATCACTTaGGAGAAGTTTCTGAGGGTTGCGGAAAGGACTCCC +
Preference number: 6 (lower is better)
Translates to: MPIAGNSLQVIT*EKFLRVAERTP
Trigger: GGGAGTCCTTTCCGCAACCCTCAGAAACTTCTCCAAAGTGATTACTTGCAGGGAGTTCCCAGCAATGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644024.2