Pregenerated sensors for POU1F1 (Homo sapiens)
Ensembl gene IDs: ENSG00000064835Ensembl transcript IDs: ENST00000344265.8, ENST00000350375.7, ENST00000560656.1, ENST00000561167.5
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGAGAGCCATGCACAGCTaGCAGGGCCTCCCCAACATT | + |
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Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELRAMHS*QGLPNI Trigger: AATGTTGGGGAGGCCCTGGCAGCTGTGCATGGCTCT...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR GCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTACTGAATTCAGAGCCATaGACAGCTGCCAGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVLNSEP*TAARAS Trigger: GGAGGCCCTGGCAGCTGTGCATGGCTCTGAATTCAG...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR GCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAAGCTGTGGGGTCCTCTaGCAGAAGAGGCTGGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVSCGVL*QKRLVY Trigger: ATACACCAGCCTCTTCTGGCAGAGGACCCCACAGCT...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR TCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGCACTCGGCAGCACTGTaGTGCATTATCAGAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELHSAAL*CIIRGR Trigger: TCTGCCTCTGATAATGCATCACAGTGCTGCCGAGTG...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGCATTGGTGGCATGGTTaGAGACTGGTAGACACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELHWWHG*RLVDTR Trigger: CCGAGTGTCTACCAGTCTCCAACCATGCCACCAATG...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR GCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTATTCCGCCTGAGTTCCTaGTTGAAATCAGCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVFRLSS*LKSAAV Trigger: CACAGCTGCTGATTTCAAGCAGGAACTCAGGCGGAA...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR TCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGATAGGAGGAAATCCATaGCTCAAGGTGTGGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELIGGNP*LKVWSG Trigger: TCCTGACCACACCTTGAGTCATGGATTTCCTCCTAT...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR TCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGCGGCAGATTGTTGTTTaGCTGAATTCAGAGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELRQIVV*LNSEPC Trigger: GCATGGCTCTGAATTCAGTCAAACAACAATCTGCCG...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR GCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGTATCAGAGGCAGAGTTaGAGAGGCGTCAGAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELYQRQS*RGVRIQ Trigger: CTGAATTCTGACGCCTCTGCAACTCTGCCTCTGATA...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR GCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGTACAAAGCTCCTACTTaGTCAGCTTCCTCCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELYKAPT*SASSSH Trigger: ATGGCTGGAGGAAGCTGAGCAAGTAGGAGCTTTGTA...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR GCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAACCCGTTTTTCTCTCTaGCTCCGGTTGCAAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVTRFSL*LRLQNQ Trigger: TTGGTTTTGCAACCGGAGGCAGAGAGAAAAACGGGT...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAATCACATTGGTGGCATaGTTGGAGACTGGTAGACAC | + |
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Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVITLVA*LETGRH Trigger: GTGTCTACCAGTCTCCAACCATGCCACCAATGTGAT...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGTCTGCCAGAAGAGGCTaGTGTATAGGAGGAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELSARRG*CIGGNP Trigger: TGGATTTCCTCCTATACACCAGCCTCTTCTGGCAGA...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR TCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTACATCACTCCATAGGTTaGTGGCTGGTTTCCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVHHSIG*WLVSIM Trigger: CATTATGGAAACCAGCCATCAACCTATGGAGTGATG...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGCCGAAGTAAAAGCTTaGCAACTCATTCCCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELAEVKA*QLIPTR Trigger: TCTTGTGGGAATGAGTTGCCAAGCTTTTACTTCGGC...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR TCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGAGATTGTTGTTTGACTaGATTCAGAGCCATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELRLLFD*IQSHAQ Trigger: CTGTGCATGGCTCTGAATTCAGTCAAACAACAATCT...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR GCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAAATAAGGAGAACCGCTaGTCCCCAAATCAGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVNKENR*SPNQSF Trigger: AAAACTCTGATTTGGGGAGCAGCGGTTCTCCTTATT...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR TCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAACTTTTCAAGTTCTCTaGTTTCTGGAGAATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVTFQVL*FLENPC Trigger: ACATGGATTCTCCAGAAATCAGAGAACTTGAAAAGT...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR TCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAATCCTCATGATCTCTTaGGAAGAAGGTTTATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVILMIS*EEGLFC Trigger: ACAGAATAAACCTTCTTCTCAAGAGATCATGAGGAT...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR GCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTATCAATTCTCACTACCTaGATATATACATCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVSILTT*IYTSGR Trigger: CCTTCCTGATGTATATATGCAGGTAGTGAGAATTGA...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CCA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAAAGTTCTCTGATTTCTaGAGAATCCATGTCTATTGG | + |
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Preference number: 4 (lower is better) Translates to: PPALKFKTFSSDKLVELVKFSDF*RIHVYW Trigger: CCAATAGACATGGATTCTCCAGAAATCAGAGAACTT...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CCA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGCTTCCTCCAGCCATTTaGATAATATTGCTTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPPALKFKTFSSDKLVELLPPAI*IILLSV Trigger: AACTGAAAGCAATATTATCCAAATGGCTGGAGGAAG...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS TCA 90 bp | ACATTGGTGGCATGGTTGGAGACTGGTAGACACTCGGCAGCACTGTaGTGCATTATCAGAGGCAGAGTTGCAGAGGCGTCAGAATTCAGA | + |
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Preference number: 5 (lower is better) Translates to: TLVAWLETGRHSAAL*CIIRGRVAEASEFR Trigger: TCTGAATTCTGACGCCTCTGCAACTCTGCCTCTGATAATGCATCACAGTGCTGCCGAGTGTCTACCAGTCTCCAACCATGCCACCAATGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344265.8 ENST00000350375.7 ENST00000560656.1 ENST00000561167.5 |
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| CDS GCA 90 bp | AAATCGGCAGATTGTTGTTTGACTGAATTCAGAGCCATGCACAGCTaGCAGGGCCTCCCCAACATTTGTCTGGGTGTATCCTGCCATCAC | + |
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Preference number: 5 (lower is better) Translates to: KSADCCLTEFRAMHS*QGLPNICLGVSCHH Trigger: GTGATGGCAGGATACACCCAGACAAATGTTGGGGAGGCCCTGGCAGCTGTGCATGGCTCTGAATTCAGTCAAACAACAATCTGCCGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561167.5 |
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| CDS GCA 90 bp | CTGGTTTCCATAATGACAGGAAGGAACAGAATAATGAAGTCCTGTTaGTGTGTTTCCCAACGTTGTCACCGAGAAATGTGTGCACAAACA | + |
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Preference number: 5 (lower is better) Translates to: LVSIMTGRNRIMKSC*CVSQRCHREMCAQT Trigger: TGTTTGTGCACACATTTCTCGGTGACAACGTTGGGAAACACAGCAACAGGACTTCATTATTCTGTTCCTTCCTGTCATTATGGAAACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344265.8 |
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| CDS CCA 90 bp | CCCAACGTTGTCACCGAGAAATGTGTGCACAAACATTTAGGAGTTTaGATCAAAGACAAAATAGATGGGACTGTAGACATCACATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PNVVTEKCVHKHLGV*IKDKIDGTVDITLV Trigger: CACCAATGTGATGTCTACAGTCCCATCTATTTTGTCTTTGATCCAAACTCCTAAATGTTTGTGCACACATTTCTCGGTGACAACGTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344265.8 |
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| CDS-3UTR CAA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGACATTGGTGGCATGGTaGGAGACTGGTAGACACTCG | + |
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Preference number: 5 (lower is better) Translates to: TPPALKFKTFSSDKLVELTLVAW*ETGRHS Trigger: CGAGTGTCTACCAGTCTCCAACCATGCCACCAATGT...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CAA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTACAAAGCTCCTACTaGCTCAGCTTCCTCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: TPPALKFKTFSSDKLVELVQSSY*LSFLQP Trigger: TGGCTGGAGGAAGCTGAGCAAGTAGGAGCTTTGTAC...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CAA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGGGCCTCCCCAACATTaGTCTGGGTGTATCCTAATT | + |
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Preference number: 5 (lower is better) Translates to: TPPALKFKTFSSDKLVELGPPQH*SGCILI Trigger: AATTAGGATACACCCAGACAAATGTTGGGGAGGCCC...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CAA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGCTGTAGACATCACATaGGTGGCATGGTTGGAGACT | + |
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Preference number: 5 (lower is better) Translates to: TPPALKFKTFSSDKLVELAVDIT*VAWLET Trigger: AGTCTCCAACCATGCCACCAATGTGATGTCTACAGC...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CAA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGAGCCGAAGTAAAAGCTaGGCAACTCATTCCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPPALKFKTFSSDKLVELSRSKS*ATHSHK Trigger: CTTGTGGGAATGAGTTGCCAAGCTTTTACTTCGGCT...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CAA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTACCATCACTCCATAGGTaGATGGCTGGTTTCCATAAT | + |
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Preference number: 5 (lower is better) Translates to: PPALKFKTFSSDKLVELVPSLHR*MAGFHN Trigger: ATTATGGAAACCAGCCATCAACCTATGGAGTGATGG...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CAA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGTCGGCAGATTGTTGTTaGACTGAATTCAGAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: TPPALKFKTFSSDKLVELSADCC*TEFRAM Trigger: CATGGCTCTGAATTCAGTCAAACAACAATCTGCCGA...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CAA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAGCTCCCACTTTTTCATaGTACAAAGCTCCTACTTGC | + |
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Preference number: 5 (lower is better) Translates to: PPALKFKTFSSDKLVELVAPTFS*YKAPTC Trigger: GCAAGTAGGAGCTTTGTACAATGAAAAAGTGGGAGC...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS-3UTR CAA 90 bp | CCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGGTAGAGAATCCATGTCTATaGGCTCTTCCACCAATTTAC | + |
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Preference number: 5 (lower is better) Translates to: PPALKFKTFSSDKLVELVENPCL*ALPPIY Trigger: GTAAATTGGTGGAAGAGCCAATAGACATGGATTCTC...TACCAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS CCA 90 bp | TCTCACTTTAAATTCATTGGCAAACTTTTCAAGTTCTCTGATTTCTaGAGAATCCATGTCTATTGGCTCTTCCACCAATTTACTTTTCCG | + |
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Preference number: 5 (lower is better) Translates to: SHFKFIGKLFKFSDF*RIHVYWLFHQFTFP Trigger: CGGAAAAGTAAATTGGTGGAAGAGCCAATAGACATGGATTCTCCAGAAATCAGAGAACTTGAAAAGTTTGCCAATGAATTTAAAGTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000344265.8 ENST00000350375.7 ENST00000560656.1 |
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| CDS-3UTR CAA 90 bp | ACACCTCCAGCTCTTAAGTTCAAAACTTTTAGTTCAGACAAATTAGTAGAGTTGAACTCTGATTCAGACTaGTTTTCACCCGTTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: TPPALKFKTFSSDKLVELNSDSD*FSPVFL Trigger: GAGAAAAACGGGTGAAAACAAGTCTGAATCAGAGTT...CAACTCTACTAATTTGTCTGAACTAAAAGTTTTGAACTTAAGAGCTGGAGGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000350375.7 |
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| CDS CAA 72 bp | CAGAGCCATGCACAGCTGCCAGGGCCTCCCCAACATTaGTCTGGGTGTATCCTGCCATCACTCCATAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: QSHAQLPGPPQH*SGCILPSLHRL Trigger: CAACCTATGGAGTGATGGCAGGATACACCCAGACAAATGTTGGGGAGGCCCTGGCAGCTGTGCATGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561167.5 |
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| CDS GCA 72 bp | GGCTCTTCCACCAATTTACTTTTCCGCCTGAGTTCCTaGTTGAAATCAGCAGCTGTGGGGTCCTCTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GSSTNLLFRLSS*LKSAAVGSSAR Trigger: TCTGGCAGAGGACCCCACAGCTGCTGATTTCAAGCAGGAACTCAGGCGGAAAAGTAAATTGGTGGAAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000344265.8 ENST00000350375.7 ENST00000560656.1 |
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| CDS TCA 72 bp | GCTGCAGATTTTCAAATCGGCAGATTGTTGTTTGACTaGATTCAGAGCCATGCACAGCTGCCAGGGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: AADFQIGRLLFD*IQSHAQLPGPP Trigger: GGGAGGCCCTGGCAGCTGTGCATGGCTCTGAATTCAGTCAAACAACAATCTGCCGATTTGAAAATCTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344265.8 ENST00000350375.7 ENST00000561167.5 |
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| CDS TCA 72 bp | CTGAGCTGCAGATTTTCAAATCGGCAGATTGTTGTTTaGCTGAATTCAGAGCCATGCACAGCTGCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSCRFSNRQIVV*LNSEPCTAARA Trigger: GGCCCTGGCAGCTGTGCATGGCTCTGAATTCAGTCAAACAACAATCTGCCGATTTGAAAATCTGCAGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344265.8 ENST00000350375.7 ENST00000561167.5 |
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| CDS CAA 72 bp | GCTGAGCTGCAGATTTTCAAATCGGCAGATTGTTGTTaGACTGAATTCAGAGCCATGCACAGCTGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AELQIFKSADCC*TEFRAMHSCQG Trigger: GCCCTGGCAGCTGTGCATGGCTCTGAATTCAGTCAAACAACAATCTGCCGATTTGAAAATCTGCAGCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344265.8 ENST00000350375.7 ENST00000561167.5 |
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| CDS GCA 72 bp | CTCGGCAGCACTGTGATGCATTATCAGAGGCAGAGTTaGAGAGGCGTCAGAATTCAGAGGTATAAAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: LGSTVMHYQRQS*RGVRIQRYKGI Trigger: GATACCTTTATACCTCTGAATTCTGACGCCTCTGCAACTCTGCCTCTGATAATGCATCACAGTGCTGCCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344265.8 ENST00000350375.7 ENST00000560656.1 ENST00000561167.5 |
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| CDS CAA 72 bp | GACAAGGGGTTAAACTACCTGCCATCACTCCATAGGTaGATGGCTGGTTTCCATAATGACAGGAAGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: DKGLNYLPSLHR*MAGFHNDRKEQ Trigger: CTGTTCCTTCCTGTCATTATGGAAACCAGCCATCAACCTATGGAGTGATGGCAGGTAGTTTAACCCCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344265.8 ENST00000350375.7 ENST00000560656.1 |
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| CDS CAA 72 bp | CATTTGTCTGGGTGTATCCTGCCATCACTCCATAGGTaGATGGCTGGTTTCCATAATGACAGGAAGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: HLSGCILPSLHR*MAGFHNDRKEQ Trigger: CTGTTCCTTCCTGTCATTATGGAAACCAGCCATCAACCTATGGAGTGATGGCAGGATACACCCAGACAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561167.5 |
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| CDS CAA 90 bp | GCTGGTTTCCATAATGACAGGAAGGAACAGAATAATGAAGTCCTGTaGCTGTGTTTCCCAACGTTGTCACCGAGAAATGTGTGCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: AGFHNDRKEQNNEVL*LCFPTLSPRNVCTN Trigger: GTTTGTGCACACATTTCTCGGTGACAACGTTGGGAAACACAGCAACAGGACTTCATTATTCTGTTCCTTCCTGTCATTATGGAAACCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344265.8 |
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| CDS CAA 72 bp | CATAATGACAGGAAGGAACAGAATAATGAAGTCCTGTaGCTGTGTTTCCCAACGTTGTCACCGAGAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: HNDRKEQNNEVL*LCFPTLSPRNV Trigger: CACATTTCTCGGTGACAACGTTGGGAAACACAGCAACAGGACTTCATTATTCTGTTCCTTCCTGTCATTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344265.8 |
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| CDS GCA 72 bp | ATAATGACAGGAAGGAACAGAATAATGAAGTCCTGTTaGTGTGTTTCCCAACGTTGTCACCGAGAAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: IMTGRNRIMKSC*CVSQRCHREMC Trigger: ACACATTTCTCGGTGACAACGTTGGGAAACACAGCAACAGGACTTCATTATTCTGTTCCTTCCTGTCATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344265.8 |
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| CDS CAA 90 bp | TCCCAACGTTGTCACCGAGAAATGTGTGCACAAACATTTAGGAGTTaGGATCAAAGACAAAATAGATGGGACTGTAGACATCACATTGGT | + |
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Preference number: 6 (lower is better) Translates to: SQRCHREMCAQTFRS*DQRQNRWDCRHHIG Trigger: ACCAATGTGATGTCTACAGTCCCATCTATTTTGTCTTTGATCCAAACTCCTAAATGTTTGTGCACACATTTCTCGGTGACAACGTTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344265.8 |
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| CDS CCA 72 bp | GTCACCGAGAAATGTGTGCACAAACATTTAGGAGTTTaGATCAAAGACAAAATAGATGGGACTGTAGACATC | + |
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Preference number: 6 (lower is better) Translates to: VTEKCVHKHLGV*IKDKIDGTVDI Trigger: GATGTCTACAGTCCCATCTATTTTGTCTTTGATCCAAACTCCTAAATGTTTGTGCACACATTTCTCGGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344265.8 |
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| CDS CAA 72 bp | TGTCACCGAGAAATGTGTGCACAAACATTTAGGAGTTaGGATCAAAGACAAAATAGATGGGACTGTAGACAT | + |
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Preference number: 6 (lower is better) Translates to: CHREMCAQTFRS*DQRQNRWDCRH Trigger: ATGTCTACAGTCCCATCTATTTTGTCTTTGATCCAAACTCCTAAATGTTTGTGCACACATTTCTCGGTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344265.8 |
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