Pregenerated sensors for POTEM (Homo sapiens)
Ensembl gene IDs: ENSG00000222036Ensembl transcript IDs: ENST00000547889.6
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTGGCTGTGCTGTGCTGAGGCACCTCTTCTACCCCTTGTCAGCTTaGGCTCTCCAAAGCCTGCAGGCCAGAACGGCTAGTCACCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: RGCAVLRHLFYPLSA*ALQSLQARTASHPN Trigger: GTTTGGGTGACTAGCCGTTCTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTCAGCACAGCACAGCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CCA 90 bp | CCCTCTCTCCAGGAGCTCTGTCCCAGGAACATTTCAAATTTCCATTaGCCAAGGGATGCTGGTGGGGGTAGCTGGAGGCCCCAGTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: PSLQELCPRNISNFH*PRDAGGGSWRPQLG Trigger: TCCCAACTGGGGCCTCCAGCTACCCCCACCAGCATCCCTTGGCCAATGGAAATTTGAAATGTTCCTGGGACAGAGCTCCTGGAGAGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CCA 90 bp | TCACAAGGGCAAGTGGAGCCTAGAGAGATAGCTGTCCCTGCCCTCTaGGCTCCACATCACCTGACTTGCTGCTCCACCACTTTGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: SQGQVEPREIAVPAL*APHHLTCCSTTLLV Trigger: GACAAGCAAAGTGGTGGAGCAGCAAGTCAGGTGATGTGGAGCCCAGAGGGCAGGGACAGCTATCTCTCTAGGCTCCACTTGCCCTTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CCA 90 bp | CATTTGCTCCTGGAAGCTCTGTCCAAGGAACTGCTGAGTTGCTACTaGCTTGATAGCTCCAGTGGTGGGCTGGCTAGAGACACAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: HLLLEALSKELLSCY*LDSSSGGLARDTGQ Trigger: CTGGCCTGTGTCTCTAGCCAGCCCACCACTGGAGCTATCAAGCCAGTAGCAACTCAGCAGTTCCTTGGACAGAGCTTCCAGGAGCAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR GCA 90 bp | GGATTTCATTTGCTCCTGGAAGCTCTGTCCAAGGAACTGCTGAGTTaGTACTGGCTTGATAGCTCCAGTGGTGGGCTGGCTAGAGACACA | + |
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Preference number: 1 (lower is better) Translates to: GFHLLLEALSKELLS*YWLDSSSGGLARDT Trigger: TGTGTCTCTAGCCAGCCCACCACTGGAGCTATCAAGCCAGTAGCAACTCAGCAGTTCCTTGGACAGAGCTTCCAGGAGCAAATGAAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR TCA 90 bp | AGAAAGGATTTCATTTGCTCCTGGAAGCTCTGTCCAAGGAACTGCTaGGTTGCTACTGGCTTGATAGCTCCAGTGGTGGGCTGGCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: RKDFICSWKLCPRNC*VATGLIAPVVGWLE Trigger: CTCTAGCCAGCCCACCACTGGAGCTATCAAGCCAGTAGCAACTCAGCAGTTCCTTGGACAGAGCTTCCAGGAGCAAATGAAATCCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR GCA 90 bp | CTAAGGAGTGCTGAGATCAGACCAGCCCCATCTCATGTGCAAGACTaGCCAGCCTCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: LRSAEIRPAPSHVQD*PASKDQVSEENSLK Trigger: TTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGAGGCTGGGCAGTCTTGCACATGAGATGGGGCTGGTCTGATCTCAGCACTCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CCA 90 bp | CTCAGACCTGATGTCTGCTGGGCAATCTTGCACATGAGATGTGGCTaGTCTGACCTCAGCATTCCTAAAGTGCTGGGACAAAGTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LRPDVCWAILHMRCG*SDLSIPKVLGQSVS Trigger: TGAGACACTTTGTCCCAGCACTTTAGGAATGCTGAGGTCAGACCAGCCACATCTCATGTGCAAGATTGCCCAGCAGACATCAGGTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CCA 90 bp | ATTGACTCGTATTTTCCAGGGAAGATGATAGCCTACCCCTTCCTCTaGGAGCTCTGTACCACTGAGGTACGAACCTGTTGCCAATCTGAA | + |
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Preference number: 1 (lower is better) Translates to: IDSYFPGKMIAYPFL*ELCTTEVRTCCQSE Trigger: TTCAGATTGGCAACAGGTTCGTACCTCAGTGGTACAGAGCTCCCAGAGGAAGGGGTAGGCTATCATCTTCCCTGGAAAATACGAGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CCA 90 bp | GATATATCTTCTGAGGATAGCAAGGGCAGTTCACTGCAAAGGCAGTaGCAGAAAGGATTTCATTTGCTCCTGGAAGCTCTGTCCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: DISSEDSKGSSLQRQ*QKGFHLLLEALSKE Trigger: TTCCTTGGACAGAGCTTCCAGGAGCAAATGAAATCCTTTCTGCCACTGCCTTTGCAGTGAACTGCCCTTGCTATCCTCAGAAGATATATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR GCA 90 bp | ATCAACCTTACATCTCAACCAAATTTTGGGAGATCAGGGACTCTCTaGAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTT | + |
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Preference number: 1 (lower is better) Translates to: INLTSQPNFGRSGTL*RGEAPQPQQIILLV Trigger: AACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCTGATCTCCCAAAATTTGGTTGAGATGTAAGGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR GCA 90 bp | AGCTCTTGTAAGGTAGATCTGGTGATATTGAATTCCCTCAGCATTTaGTTGTCTGAAAAGGATCTTATTTCTCCTTCACTTATGATGCCT | + |
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Preference number: 1 (lower is better) Translates to: SSCKVDLVILNSLSI*LSEKDLISPSLMMP Trigger: AGGCATCATAAGTGAAGGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATTCAATATCACCAGATCTACCTTACAAGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCTCCTGTCCAGTGAGGTaGAACAGGATCAGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RLVTQTAKVVACPSLQELSCPVR*NRIRGL Trigger: CAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGA...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCAAAGCAGCTATGCTGTaGTCTGGGATCTCTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSKAAML*SGISSF Trigger: GAAAGAAGAGATCCCAGAGCACAGCATAGCTGCTTT...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGCCTACCCCTTCCTCTaGGAGCTCTGTACCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGAYPFL*ELCTTE Trigger: CTCAGTGGTACAGAGCTCCCAGAGGAAGGGGTAGGC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 90 bp | GGAACAGGATCAGGGGCCTGCTTACAGAAGCAGTCTGGCCATGATTaGGTAAAGCAGCTATGCTGTGCTCTGGGATCTCTTCTTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GTGSGACLQKQSGHD*VKQLCCALGSLLSL Trigger: CAGGGAAAGAAGAGATCCCAGAGCACAGCATAGCTGCTTTACCAAATCATGGCCAGACTGCTTCTGTAAGCAGGCCCCTGATCCTGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCGATCTCTTCTTTCCCTaGTCAGTTTGTACTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSDLFFP*SVCTLQ Trigger: TTGGAGAGTACAAACTGACCAGGGAAAGAAGAGATC...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTACCCCTTGTCAGCTTaGGCTCTCCAAAGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGYPLSA*ALQSLQ Trigger: CTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTA...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGGGAACTCTCAGACCTaGTGTCTGCTGGGCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGGNSQT*CLLGNL Trigger: AAGATTGCCCAGCAGACATCAGGTCTGAGAGTTCCC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGGGGCTCTCCAAAGCCTaGAGGCCAGAACGGCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: SKDQVSEENSLKSESPAQGLSKA*RPERLV Trigger: GACTAGCCGTTCTGGCCTGCAGGCTTTGGAGAGCCC...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGAAACAGCAAAGGTGGTaGCCTGCCCCTCTCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SKDQVSEENSLKSESPAQKQQRW*PAPLSR Trigger: CCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTT...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAGCTGCTGTGGAATGCTaGGGGTCCCCTCAAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GEAPQPQQIILLVWAIKTAAVEC*GSPQVP Trigger: AGGGACTTGAGGGGACCCCCAGCATTCCACAGCAGC...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAGGGCTCCACATCACCTaGCTTGCTGCTCCACCACTT | + |
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Preference number: 2 (lower is better) Translates to: GEAPQPQQIILLVWAIKTGLHIT*LAAPPL Trigger: AAGTGGTGGAGCAGCAAGTCAGGTGATGTGGAGCCC...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGTAAAGCAGCTATaGTGTGCTCTGGGATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGLVKQL*CALGSL Trigger: AAGAGATCCCAGAGCACAGCATAGCTGCTTTACCAA...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTCACTGCGTTCTTCACTaGATTTTTGTAGTGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGHCVLH*IFVVAG Trigger: ACCAGCCACTACAAAAATGCAGTGAAGAACGCAGTG...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGCATGTTTTCGTAGCGTaGCTGTGCTGTGCTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SKDQVSEENSLKSESPAQHVFVA*LCCAEA Trigger: TGCCTCAGCACAGCACAGCCACGCTACGAAAACATG...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGCATTCCTAAAGTGCTaGGACAAAGTGTCTCACAAG | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGAFLKC*DKVSHK Trigger: CTTGTGAGACACTTTGTCCCAGCACTTTAGGAATGC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGCCACATCACCTGACTTaGTGCTCCACCACTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SKDQVSEENSLKSESPAQPHHLT*CSTTLL Trigger: AAGCAAAGTGGTGGAGCAGCAAGTCAGGTGATGTGG...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAAGAGATAGCTGTCCCTaGCCTCTGGGCTCCACATCA | + |
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Preference number: 2 (lower is better) Translates to: GEAPQPQQIILLVWAIKTRDSCP*PLGSTS Trigger: TGATGTGGAGCCCAGAGGGCAGGGACAGCTATCTCT...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGATTGGCTTGTTCTTTaGGTCAACTGCAGCTTATTG | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGDWLVL*VNCSLL Trigger: CAATAAGCTGCAGTTGACCCAAAGAACAAGCCAATC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTTCTCCTTCACTTATaGTGCCTAATTTTGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGFLLHL*CLILLD Trigger: GTCCAGCAAAATTAGGCATCATAAGTGAAGGAGAAA...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTAACAGGATCAGGGGCCTaGTTACAGAAGCAGTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FLASLDCVIHCVLHCIFVTGSGA*LQKQSG Trigger: GCCAGACTGCTTCTGTAAGCAGGCCCCTGATCCTGT...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGACTGCGTAATTCACTaGGTTCTTCACTGCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: RDSLQGRSSTTSANYPIGDCVIH*VLHCIF Trigger: AAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTATATGGTATGGGCATCTaGGAGTGCCCTGTAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FLASLDCVIHCVLHCIFVYGMGI*ECPVSR Trigger: CCTGCTTACAGGGCACTCTCAGATGCCCATACCATA...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTAGGAAAGATGGCGGCCTaGCCCATCTTTTCTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FLASLDCVIHCVLHCIFVGKMAA*PIFSLR Trigger: TCTGAGAGAAAAGATGGGGCAGGCCGCCATCTTTCC...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTACCAGCACAGCACAGCTaGTCTACACAATCGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: FLASLDCVIHCVLHCIFVPAQHS*STQSWL Trigger: TAGCCACGATTGTGTAGAGCAGCTGTGCTGTGCTGG...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGCTATGGGAGATGGATTaGCTTGTTCTTTGGGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: SKDQVSEENSLKSESPAQLWEMD*LVLWVN Trigger: GTTGACCCAAAGAACAAGCCAATCCATCTCCCATAG...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGAGAAAGGATTTCATTTaGTCCTGGAAGCTCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SKDQVSEENSLKSESPAQRKDFI*SWKLCP Trigger: TGGACAGAGCTTCCAGGAGCAAATGAAATCCTTTCT...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTACACATGAGATGTGGCTaGTCTGACCTCAGCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: FLASLDCVIHCVLHCIFVHMRCG*SDLSIP Trigger: AGGAATGCTGAGGTCAGACCAGCCACATCTCATGTG...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAACAGAAACTATGGTATaGGCATCTGAGAGTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GEAPQPQQIILLVWAIKTTETMV*ASESAL Trigger: CAGGGCACTCTCAGATGCCCATACCATAGTTTCTGT...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTAAAAGACTTCACCCACTaGCTAGAAATGTGTTCGGGG | + |
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Preference number: 2 (lower is better) Translates to: FLASLDCVIHCVLHCIFVKDFTH*LEMCSG Trigger: CCCCGAACACATTTCTAGTCAGTGGGTGAAGTCTTT...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAGTTCTTTGGGTCAACTaGAGCTTATTGGAGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: GEAPQPQQIILLVWAIKTVLWVN*SLLEVL Trigger: CAACACCTCCAATAAGCTGCAGTTGACCCAAAGAAC...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACATCAGCATTCCTAAAGTaGTGGGACAAAGTGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GEAPQPQQIILLVWAIKTSAFLK*WDKVSH Trigger: GTGAGACACTTTGTCCCAGCACTTTAGGAATGCTGA...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACATCACTGCAAAGGCAGTaGCAGAAAGGATTTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: GEAPQPQQIILLVWAIKTSLQRQ*QKGFHL Trigger: CAAATGAAATCCTTTCTGCCACTGCCTTTGCAGTGA...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGCTTAAAGAAAAAGTCTaGCCACGTTTTTATAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SKDQVSEENSLKSESPAQLKEKV*PRFYRA Trigger: TGCTCTATAAAAACGTGGCCAGACTTTTTCTTTAAG...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 90 bp | TTTAGTGCTTCCTTCAGGAGCTCTTGTAAGGTAGATCTGGTGATATaGAATTCCCTCAGCATTTGCTTGTCTGAAAAGGATCTTATTTCT | + |
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Preference number: 2 (lower is better) Translates to: FSASFRSSCKVDLVI*NSLSICLSEKDLIS Trigger: AGAAATAAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATTCAATATCACCAGATCTACCTTACAAGAGCTCCTGAAGGAAGCACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAAATTCCCTCAGCATTTaGTTGTCTGAAAAGGATCTT | + |
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Preference number: 2 (lower is better) Translates to: GEAPQPQQIILLVWAIKTNSLSI*LSEKDL Trigger: AAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATT...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CAA 90 bp | TCTTGTAAGGTAGATCTGGTGATATTGAATTCCCTCAGCATTTGCTaGTCTGAAAAGGATCTTATTTCTCCTTCACTTATGATGCCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SCKVDLVILNSLSIC*SEKDLISPSLMMPN Trigger: ATTAGGCATCATAAGTGAAGGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATTCAATATCACCAGATCTACCTTACAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | CAAGGGATGCTGGTGGGGGTAGCTGGAGGCCCCAGTTaGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGMLVGVAGGPS*EVLSSEVEQDQ Trigger: CTGATCCTGTTCCACCTCACTGGACAGGACCTCCCAACTGGGGCCTCCAGCTACCCCCACCAGCATCCCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | CTGGAGGCCCCAGTTGGGAGGTCCTGTCCAGTGAGGTaGAACAGGATCAGGGGCCTGCTTACAGAAGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LEAPVGRSCPVR*NRIRGLLTEAV Trigger: GACTGCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCAACTGGGGCCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | GCTGTGCTGAGGCACCTCTTCTACCCCTTGTCAGCTTaGGCTCTCCAAAGCCTGCAGGCCAGAACGGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: AVLRHLFYPLSA*ALQSLQARTAS Trigger: ACTAGCCGTTCTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTCAGCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR TCA 72 bp | TGGGGCCCTGGGAGAGGCAAGCAGACTAAGGAGTGCTaGGATCAGACCAGCCCCATCTCATGTGCAAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: WGPGRGKQTKEC*DQTSPISCARL Trigger: CAGTCTTGCACATGAGATGGGGCTGGTCTGATCTCAGCACTCCTTAGTCTGCTTGCCTCTCCCAGGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | CAAGTGGAGCCTAGAGAGATAGCTGTCCCTGCCCTCTaGGCTCCACATCACCTGACTTGCTGCTCCACCACT | + |
|
Preference number: 3 (lower is better) Translates to: QVEPREIAVPAL*APHHLTCCSTT Trigger: AGTGGTGGAGCAGCAAGTCAGGTGATGTGGAGCCCAGAGGGCAGGGACAGCTATCTCTCTAGGCTCCACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR TCA 72 bp | GGTCAGTTTGTACTCTCCAAAGCCCTCAGGCTGGAATaGCTAAGTTGCCCGAACGGGAAAGATGGCGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GQFVLSKALRLE*LSCPNGKDGGL Trigger: CAGGCCGCCATCTTTCCCGTTCGGGCAACTTAGTCATTCCAGCCTGAGGGCTTTGGAGAGTACAAACTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR GCA 72 bp | TCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTaGAGGCCAGAACGGCTAGTCACCCAAACAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSTPCQLGLSKA*RPERLVTQTAK Trigger: CTTTGCTGTTTGGGTGACTAGCCGTTCTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR GCA 72 bp | GCTGAGATCAGACCAGCCCCATCTCATGTGCAAGACTaGCCAGCCTCTAAAGATCAGGTCTCAGAGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: AEIRPAPSHVQD*PASKDQVSEEN Trigger: GTTCTCCTCTGAGACCTGATCTTTAGAGGCTGGGCAGTCTTGCACATGAGATGGGGCTGGTCTGATCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGCTCCACCACTTTGCTaGTCTCCTGGGTGCTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RDSLQGRSSTTSANYPIGAPPLC*SPGCSI Trigger: GATGGAGCACCCAGGAGACAAGCAAAGTGGTGGAGC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR TCA 72 bp | AGGATCAGGGGCCTGCTTACAGAAGCAGTCTGGCCATaGTTTGGTAAAGCAGCTATGCTGTGCTCTGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: RIRGLLTEAVWP*FGKAAMLCSGI Trigger: GATCCCAGAGCACAGCATAGCTGCTTTACCAAATCATGGCCAGACTGCTTCTGTAAGCAGGCCCCTGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR GCA 72 bp | CTCTGGGAGCTCTGTACCACTGAGGTACGAACCTGTTaGCAATCTGAACACACCAATAAGATGTGGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LWELCTTEVRTC*QSEHTNKMWLE Trigger: CTCCAGCCACATCTTATTGGTGTGTTCAGATTGGCAACAGGTTCGTACCTCAGTGGTACAGAGCTCCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | GGCTACCTCAGACACTCTGAAGCCCTAAGGCTGAAATaGCTGGGTCACCCAAACAGCAAAGATGACAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: GYLRHSEALRLK*LGHPNSKDDNL Trigger: CAGATTGTCATCTTTGCTGTTTGGGTGACCCAGCCATTTCAGCCTTAGGGCTTCAGAGTGTCTGAGGTAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR GCA 72 bp | GTCAGAAGCAAGCTGAAACTCAGGAAAGGAGATGCCTaGTCTCCATCGTCATGGAAGCAGGAAAACTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VRSKLKLRKGDA*SPSSWKQENLP Trigger: AGGCAAGTTTTCCTGCTTCCATGACGATGGAGAGCAGGCATCTCCTTTCCTGAGTTTCAGCTTGCTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | TCTGAGGATAGCAAGGGCAGTTCACTGCAAAGGCAGTaGCAGAAAGGATTTCATTTGCTCCTGGAAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SEDSKGSSLQRQ*QKGFHLLLEAL Trigger: CAGAGCTTCCAGGAGCAAATGAAATCCTTTCTGCCACTGCCTTTGCAGTGAACTGCCCTTGCTATCCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTCAGAAAGGATTTCATTaGCTCCTGGAAGCTCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RDSLQGRSSTTSANYPIGQKGFH*LLEALS Trigger: GGACAGAGCTTCCAGGAGCAAATGAAATCCTTTCTG...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CCA 72 bp | CCTGTTGCCAATCTGAACACACCAATAAGATGTGGCTaGAGGCAAGTTGAGAAGTCTTACCTAGTCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PVANLNTPIRCG*RQVEKSYLVRR Trigger: CCTCCTGACTAGGTAAGACTTCTCAACTTGCCTCCAGCCACATCTTATTGGTGTGTTCAGATTGGCAACAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR TCA 72 bp | AGCCTATGTATGCCACCGCATGTGAGATGGGTTTCTTaGAGACAGCATACTCCAGTGGGTCTTGGTTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLCMPPHVRWVS*RQHTPVGLGSL Trigger: TAAAGAACCAAGACCCACTGGAGTATGCTGTCTTCAAGAAACCCATCTCACATGCGGTGGCATACATAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | GTGTGGTACCTATGGGAGATGGATTGGCTTGTTCTTTaGGTCAACTGCAGCTTATTGGAGGTGTTGATATGG | + |
|
Preference number: 3 (lower is better) Translates to: VWYLWEMDWLVL*VNCSLLEVLIW Trigger: CCATATCAACACCTCCAATAAGCTGCAGTTGACCCAAAGAACAAGCCAATCCATCTCCCATAGGTACCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR GCA 72 bp | GTGATATATCTTCTGAGGATAGCAAGGGCAGTTCACTaGAAAGGCAGTGGCAGAAAGGATTTCATTTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VIYLLRIARAVH*KGSGRKDFICS Trigger: GGAGCAAATGAAATCCTTTCTGCCACTGCCTTTGCAGTGAACTGCCCTTGCTATCCTCAGAAGATATATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | GGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTaGTTTGGGCAATTAAAACAGCCCAGGTTGGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GEKLHNLSKLSY*FGQLKQPRLVS Trigger: TGATACCAACCTGGGCTGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACACTTTCCCTGGTCAGTTaGTACTCTCCAAAGCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GEAPQPQQIILLVWAIKTLSLVS*YSPKPS Trigger: TGAGGGCTTTGGAGAGTACAAACTGACCAGGGAAAG...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTAATAAGAACAGGGACTaGCTTAAAGAAAAAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RDSLQGRSSTTSANYPIGNKNRD*LKEKVW Trigger: CCAGACTTTTTCTTTAAGCAAGTCCCTGTTCTTATT...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTATCCACATCACCTGACTaGCTGCTCCACCACTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLASLDCVIHCVLHCIFVSTSPD*LLHHFA Trigger: AGCAAAGTGGTGGAGCAGCAAGTCAGGTGATGTGGA...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR GCA 72 bp | GGTTGGTTTTTAGCATCACTGGACTGCGTAATTCACTaGGTTCTTCACTGCATTTTTGTAGTGGCTGGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GWFLASLDCVIH*VLHCIFVVAGD Trigger: ATCACCAGCCACTACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAACCAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CCA 72 bp | GTCAGCTGGTTATTTTGCAGACTTAACGTATGTGGTTaGTTTTTAGCATCACTGGACTGCGTAATTCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: VSWLFCRLNVCG*FLASLDCVIHC Trigger: GCAGTGAATTACGCAGTCCAGTGATGCTAAAAACCAACCACATACGTTAAGTCTGCAAAATAACCAGCTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR-3UTR CAA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACACTCCATTCCTTTATTTaGAGCCTATGTATGCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: GEAPQPQQIILLVWAIKTLHSFI*SLCMPP Trigger: CGGTGGCATACATAGGCTCAAAATAAAGGAATGGAG...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CCA 72 bp | CTTGGTTCTTTATCCAGCTTGCCCCGTGTCTTTCAATaGGAGCATTTAGCCCATTTTCATTTAAGGTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LGSLSSLPRVFQ*EHLAHFHLRLV Trigger: TACTAACCTTAAATGAAAATGGGCTAAATGCTCCCATTGAAAGACACGGGGCAAGCTGGATAAAGAACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR TCA 72 bp | TCTGGTGATATTGAATTCCCTCAGCATTTGCTTGTCTaGAAAGGATCTTATTTCTCCTTCACTTATGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: SGDIEFPQHLLV*KGSYFSFTYDA Trigger: GGCATCATAAGTGAAGGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATTCAATATCACCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR TCA 72 bp | GCTTGTCTGAAAAGGATCTTATTTCTCCTTCACTTATaGTGCCTAATTTTGCTGGACATGAAATTATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ACLKRILFLLHL*CLILLDMKLWA Trigger: AGCCCATAATTTCATGTCCAGCAAAATTAGGCATCATAAGTGAAGGAGAAATAAGATCCTTTTCAGACAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR GCA 72 bp | AAGGTAGATCTGGTGATATTGAATTCCCTCAGCATTTaGTTGTCTGAAAAGGATCTTATTTCTCCTTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: KVDLVILNSLSI*LSEKDLISPSL Trigger: AAGTGAAGGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATTCAATATCACCAGATCTACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGGCAAAGGTGGTGGCCTaGCCCTCTCTCCAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQAKVVA*PSLQEL Trigger: GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGC...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCGCTGGTGGGGGTAGCTaGAGGCCCCAGTTGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSAGGGS*RPQLGG Trigger: ACCTCCCAACTGGGGCCTCCAGCTACCCCCACCAGC...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGGGGCTCTCCAAAGCCTaGAGGCCAGAACGGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQGLSKA*RPERLV Trigger: GACTAGCCGTTCTGGCCTGCAGGCTTTGGAGAGCCC...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCACAGGATCAGGGGCCTaGTTACAGAAGCAGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLVTQTAKVVACPSLQELTGSGA*LQKQSG Trigger: GCCAGACTGCTTCTGTAAGCAGGCCCCTGATCCTGT...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGTCCTGTCCAGTGAGGTaGAACAGGATCAGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQSCPVR*NRIRGL Trigger: CAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGA...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCCCCAAACAGCAAAGGTaGTGGCCTGCCCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLARDTGQEDLPIKYRVPKQQR*WPAPLS Trigger: GGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGG...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCTACCCCTTGTCAGCTTaGGCTCTCCAAAGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLVTQTAKVVACPSLQELYPLSA*ALQSLQ Trigger: CTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTA...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCGCTGCTGTGGAATGCTaGGGGTCCCCTCAAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSAAVEC*GSPQVP Trigger: AGGGACTTGAGGGGACCCCCAGCATTCCACAGCAGC...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR TCA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCTATGGTATGGGCATCTaGGAGTGCCCTGTAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLVTQTAKVVACPSLQELYGMGI*ECPVSR Trigger: CCTGCTTACAGGGCACTCTCAGATGCCCATACCATA...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCAAACAGCAAAGGTGGTaGCCTGCCCCTCTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLARDTGQEDLPIKYRVKQQRW*PAPLSR Trigger: CCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTT...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCGCCTACCCCTTCCTCTaGGAGCTCTGTACCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLARDTGQEDLPIKYRVAYPFL*ELCTTE Trigger: CTCAGTGGTACAGAGCTCCCAGAGGAAGGGGTAGGC...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCAGAGATAGCTGTCCCTaGCCTCTGGGCTCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSRDSCP*PLGSTS Trigger: TGATGTGGAGCCCAGAGGGCAGGGACAGCTATCTCT...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR CCA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCCTGCTGAGTTGCTACTaGCTTGATAGCTCCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLVTQTAKVVACPSLQELLLSCY*LDSSSG Trigger: ACCACTGGAGCTATCAAGCCAGTAGCAACTCAGCAG...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCACTTTGCTTGTCTCCTaGGTGCTCCATCCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGLARDTGQEDLPIKYRVTLLVS*VLHPRD Trigger: GTCTCTGGGATGGAGCACCCAGGAGACAAGCAAAGT...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CAA 72 bp | TGTACTCTCCAAAGCCCTCAGGCTGGAATGACTAAGTaGCCCGAACGGGAAAGATGGCGGCCTGCCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CTLQSPQAGMTK*PERERWRPAPS Trigger: AGATGGGGCAGGCCGCCATCTTTCCCGTTCGGGCAACTTAGTCATTCCAGCCTGAGGGCTTTGGAGAGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR TCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGCATCCCAGAGACATGTaGGTTAGCAATCACTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQHPRDM*VSNHSV Trigger: CACTGAGTGATTGCTAACTCACATGTCTCTGGGATG...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR TCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGCTGTCAGAAGCAAGCTaGAACTCAGGAAAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQLSEAS*NSGKEM Trigger: CATCTCCTTTCCTGAGTTTCAGCTTGCTTCTGACAG...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCCATCACCTGACTTGCTaGTCCACCACTTTGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSHHLTC*STTLLV Trigger: GACAAGCAAAGTGGTGGAGCAGCAAGTCAGGTGATG...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCCCACATCACCTGACTTaGTGCTCCACCACTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSPHHLT*CSTTLL Trigger: AAGCAAAGTGGTGGAGCAGCAAGTCAGGTGATGTGG...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCTTGGAGGTGTTGATATaGCACTTAGGGTCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLVTQTAKVVACPSLQELLEVLI*HLGSLL Trigger: GAGCAAAGACCCTAAGTGCCATATCAACACCTCCAA...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGTGCTCTCCATCGTCATaGAAGCAGGAAAACTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQCSPSS*KQENLP Trigger: AGGCAAGTTTTCCTGCTTCCATGACGATGGAGAGCA...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCAAAGACTTCACCCACTaGCTAGAAATGTGTTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLARDTGQEDLPIKYRVKDFTH*LEMCSG Trigger: CCCCGAACACATTTCTAGTCAGTGGGTGAAGTCTTT...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCTGTCCAAGGAACTGCTaGGTTGCTACTGGCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSCPRNC*VATGLI Trigger: TATCAAGCCAGTAGCAACTCAGCAGTTCCTTGGACA...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCGAACTCTCTCAAAAGTaGATCTCCAGCACAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLARDTGQEDLPIKYRVELSQK*ISSTAQ Trigger: CTGTGCTGTGCTGGAGATTCACTTTTGAGAGAGTTC...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGAAAGCAGCTATGCTGTaGTCTGGGATCTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQKAAML*SGISSF Trigger: GAAAGAAGAGATCCCAGAGCACAGCATAGCTGCTTT...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGGTTGGGGTGTGTGCTaGCCTCCTGTGTGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGGWGVC*PPVCCQ Trigger: CTGACAGCACACAGGAGGGCAGCACACACCCCAACC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCGATCTCTTCTTTCCCTaGTCAGTTTGTACTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLVTQTAKVVACPSLQELDLFFP*SVCTLQ Trigger: TTGGAGAGTACAAACTGACCAGGGAAAGAAGAGATC...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGGCATTCCTAAAGTGCTaGGACAAAGTGTCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQAFLKC*DKVSHK Trigger: CTTGTGAGACACTTTGTCCCAGCACTTTAGGAATGC...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGCCCTGTAAGCAGGTGTaGCCAGGCTGGGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDQVSEENSLKSESPAQPCKQV*PGWGPG Trigger: CCCAGGGCCCCAGCCTGGCCACACCTGCTTACAGGG...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCCAGCATTTGCTTGTCTaGAAAGGATCTTATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLVTQTAKVVACPSLQELQHLLV*KGSYFS Trigger: GGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTG...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCGTTCTTTGGGTCAACTaGAGCTTATTGGAGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSVLWVN*SLLEVL Trigger: CAACACCTCCAATAAGCTGCAGTTGACCCAAAGAAC...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGGATTGGCTTGTTCTTTaGGTCAACTGCAGCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQDWLVL*VNCSLL Trigger: CAATAAGCTGCAGTTGACCCAAAGAACAAGCCAATC...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCCCCCGTGTCTTTCAATaGGAGCATTTAGCCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGLARDTGQEDLPIKYRVPRVFQ*EHLAHF Trigger: AAAATGGGCTAAATGCTCCCATTGAAAGACACGGGG...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGTTTCTCCTTCACTTATaGTGCCTAATTTTGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQFLLHL*CLILLD Trigger: GTCCAGCAAAATTAGGCATCATAAGTGAAGGAGAAA...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCGTTGGTATCAAGCAATaGGATTTATCAAAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSVGIKQ*DLSKVR Trigger: CCTGACCTTTGATAAATCTCATTGCTTGATACCAAC...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGATAAGAACAGGGACTTaGTTAAAGAAAAAGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQIRTGT*LKKKSG Trigger: GCCAGACTTTTTCTTTAAGCAAGTCCCTGTTCTTAT...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | TGGGAGGTCCTGTCCAGTGAGGTGGAACAGGATCAGGGGCCTGCTTACAGAAGCGACTGCGTAATTCACTaGGTTCTTCACTGCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WEVLSSEVEQDQGPAYRSDCVIH*VLHCIF Trigger: AAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTC...GCTTCTGTAAGCAGGCCCCTGATCCTGTTCCACCTCACTGGACAGGACCTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTCATGTTTTCGTAGCGTaGCTGTGCTGTGCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGHVFVA*LCCAEA Trigger: TGCCTCAGCACAGCACAGCCACGCTACGAAAACATG...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGGTAGCCAGAGACCCTaGTTGAAAGACTTCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGGSQRP*LKDFTH Trigger: GTGGGTGAAGTCTTTCAACCAGGGTCTCTGGCTACC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGGCAGCTGTGCTGTGCTaGGGGTTCACTTCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDQVSEENSLKSESPAQAAVLC*GFTSAP Trigger: AGGGGCTGAAGTGAACCCCCAGCACAGCACAGCTGC...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAGGAGGGTCTGTGCTGTaGGCCCAAGCCAGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEAPQPQQIILLVWAIKTGGSVL*AQARVP Trigger: GGGAACCCTGGCTTGGGCCCACAGCACAGACCCTCC...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 72 bp | TCAGGGGCCTGCTTACAGAAGCAGTCTGGCCATGATTaGGTAAAGCAGCTATGCTGTGCTCTGGGATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGACLQKQSGHD*VKQLCCALGSL Trigger: AAGAGATCCCAGAGCACAGCATAGCTGCTTTACCAAATCATGGCCAGACTGCTTCTGTAAGCAGGCCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGGGGCTCCACATCACCTaGCTTGCTGCTCCACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SKDQVSEENSLKSESPAQGLHIT*LAAPPL Trigger: AAGTGGTGGAGCAGCAAGTCAGGTGATGTGGAGCCC...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAAGGATGGAGGGTCTGTaGTGTGGGCCCAAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEAPQPQQIILLVWAIKTRMEGL*CGPKPG Trigger: CCCTGGCTTGGGCCCACAGCACAGACCCTCCATCCT...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCAATTCCCTCAGCATTTaGTTGTCTGAAAAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGLARDTGQEDLPIKYRVNSLSI*LSEKDL Trigger: AAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATT...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTAGGAAAGGAGATGCCTaGTCTCCATCGTCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGRKGDA*SPSSWK Trigger: CTTCCATGACGATGGAGAGCAGGCATCTCCTTTCCT...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTACTCAGGAAAGGAGATaGCTGCTCTCCATCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGTQERR*LLSIVM Trigger: CATGACGATGGAGAGCAGGCATCTCCTTTCCTGAGT...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGCTTAAAGAAAAAGTCTaGCCACGTTTTTATAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQLKEKV*PRFYRA Trigger: TGCTCTATAAAAACGTGGCCAGACTTTTTCTTTAAG...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 72 bp | CAGCATACTCCAGTGGGTCTTGGTTCTTTATCCAGCTaGCCCCGTGTCTTTCAATGGGAGCATTTAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QHTPVGLGSLSS*PRVFQWEHLAH Trigger: ATGGGCTAAATGCTCCCATTGAAAGACACGGGGCAAGCTGGATAAAGAACCAAGACCCACTGGAGTATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAGTGGCTGTGCTGTGCTaGGGCACCTCTTCTACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEAPQPQQIILLVWAIKTVAVLC*GTSSTP Trigger: AGGGGTAGAAGAGGTGCCTCAGCACAGCACAGCCAC...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTGGTACCTATGGGAGATaGATTGGCTTGTTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGGTYGR*IGLFFG Trigger: CCCAAAGAACAAGCCAATCCATCTCCCATAGGTACC...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 72 bp | TGGAGTGTGTGTGGTACCTATGGGAGATGGATTGGCTaGTTCTTTGGGTCAACTGCAGCTTATTGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSVCGTYGRWIG*FFGSTAAYWRC Trigger: ACACCTCCAATAAGCTGCAGTTGACCCAAAGAACAAGCCAATCCATCTCCCATAGGTACCACACACACTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 72 bp | GAGCCTATGTATGCCACCGCATGTGAGATGGGTTTCTaGAAGACAGCATACTCCAGTGGGTCTTGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EPMYATACEMGF*KTAYSSGSWFF Trigger: AAAGAACCAAGACCCACTGGAGTATGCTGTCTTCAAGAAACCCATCTCACATGCGGTGGCATACATAGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGGGGAACTCTCAGACCTaGTGTCTGCTGGGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKDQVSEENSLKSESPAQGNSQT*CLLGNL Trigger: AAGATTGCCCAGCAGACATCAGGTCTGAGAGTTCCC...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGCCAGCACAGCACAGCTaGTCTACACAATCGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SKDQVSEENSLKSESPAQPAQHS*STQSWL Trigger: TAGCCACGATTGTGTAGAGCAGCTGTGCTGTGCTGG...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTATCTGAAGGGCTGCTGTaGAATGCTGGGGGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLASLDCVIHCVLHCIFVSEGLL*NAGGPL Trigger: GAGGGGACCCCCAGCATTCCACAGCAGCCCTTCAGA...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTCTATGGGAGATGGATTaGCTTGTTCTTTGGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGLWEMD*LVLWVN Trigger: GTTGACCCAAAGAACAAGCCAATCCATCTCCCATAG...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTAGAAAGGATTTCATTTaGTCCTGGAAGCTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGRKDFI*SWKLCP Trigger: TGGACAGAGCTTCCAGGAGCAAATGAAATCCTTTCT...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGAGACATTTCCTCTaGCTGGCTATTTTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGLRHFL*LAIFTS Trigger: GGAAGTGAAAATAGCCAGCCAGAGGAAATGTCTCAA...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR CCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTATCTCAACCAAATTTTaGGAGATCAGGGACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGISTKF*EIRDSL Trigger: CAGAGAGTCCCTGATCTCCCAAAATTTGGTTGAGAT...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAGGAAAGATGGCGGCCTaGCCCATCTTTTCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEAPQPQQIILLVWAIKTGKMAA*PIFSLR Trigger: TCTGAGAGAAAAGATGGGGCAGGCCGCCATCTTTCC...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| 3UTR CAA 72 bp | ATGGATTGGCTTGTTCTTTGGGTCAACTGCAGCTTATaGGAGGTGTTGATATGGCACTTAGGGTCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MDWLVLWVNCSL*EVLIWHLGSLL Trigger: GAGCAAAGACCCTAAGTGCCATATCAACACCTCCAATAAGCTGCAGTTGACCCAAAGAACAAGCCAATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR TCA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTTTGTTCATCACTGTaGTACTGTTCATTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDSLQGRSSTTSANYPIGFCSSL*YCSFSV Trigger: CACTGAGAATGAACAGTATCACAGTGATGAACAAAA...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547889.6 |
||
| CDS-3UTR GCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTAACTTTTCTGAAGGGCTaGTGTGGAATGCTGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLASLDCVIHCVLHCIFVTFLKG*CGMLGV Trigger: GACCCCCAGCATTCCACAGCAGCCCTTCAGAAAAGT...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGCACTGCGTTCTTCACTaGATTTTTGTAGTGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SKDQVSEENSLKSESPAQHCVLH*IFVVAG Trigger: ACCAGCCACTACAAAAATGCAGTGAAGAACGCAGTG...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGATTTCAAATTTCCATTaGCCAAGGGATGCTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SKDQVSEENSLKSESPAQISNFH*PRDAGG Trigger: CCCACCAGCATCCCTTGGCCAATGGAAATTTGAAAT...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR TCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAGTGAGATGGGTTTCTTaGAGACAGCATACTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GEAPQPQQIILLVWAIKTVRWVS*RQHTPV Trigger: CACTGGAGTATGCTGTCTTCAAGAAACCCATCTCAC...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TCTAAAGATCAGGTCTCAGAGGAGAACTCTCTCAAAAGTGAATCTCCAGCACAGTCACTGCAAAGGCAGTaGCAGAAAGGATTTCATTTG | + |
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Preference number: 4 (lower is better) Translates to: SKDQVSEENSLKSESPAQSLQRQ*QKGFHL Trigger: CAAATGAAATCCTTTCTGCCACTGCCTTTGCAGTGA...CTGTGCTGGAGATTCACTTTTGAGAGAGTTCTCCTCTGAGACCTGATCTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACATTGGTAAAGCAGCTATaGTGTGCTCTGGGATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GEAPQPQQIILLVWAIKTLVKQL*CALGSL Trigger: AAGAGATCCCAGAGCACAGCATAGCTGCTTTACCAA...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACATGTGTGTGGTACCTATaGGAGATGGATTGGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GEAPQPQQIILLVWAIKTCVWYL*EMDWLV Trigger: AACAAGCCAATCCATCTCCCATAGGTACCACACACA...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTAACAGAAACTATGGTATaGGCATCTGAGAGTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FLASLDCVIHCVLHCIFVTETMV*ASESAL Trigger: CAGGGCACTCTCAGATGCCCATACCATAGTTTCTGT...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 72 bp | TCCTTCAGGAGCTCTTGTAAGGTAGATCTGGTGATATaGAATTCCCTCAGCATTTGCTTGTCTGAAAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SFRSSCKVDLVI*NSLSICLSEKD Trigger: ATCCTTTTCAGACAAGCAAATGCTGAGGGAATTCAATATCACCAGATCTACCTTACAAGAGCTCCTGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTAGATTTCATTTGCTCCTaGAAGCTCTGTCCAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: FLASLDCVIHCVLHCIFVDFICS*KLCPRN Trigger: GTTCCTTGGACAGAGCTTCCAGGAGCAAATGAAATC...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTATTAGCATCACTGGACTaGGTAATTCACTGCGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FLASLDCVIHCVLHCIFVLASLD*VIHCVL Trigger: AAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAA...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTACGTCATGCTGTCAGCTaGTTATTTTGCAGACTTAAC | + |
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Preference number: 4 (lower is better) Translates to: FLASLDCVIHCVLHCIFVRHAVS*LFCRLN Trigger: GTTAAGTCTGCAAAATAACCAGCTGACAGCATGACG...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR GCA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTAGTCAGCTGGTTATTTTaGAGACTTAACGTATGTGGT | + |
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Preference number: 4 (lower is better) Translates to: FLASLDCVIHCVLHCIFVVSWLF*RLNVCG Trigger: ACCACATACGTTAAGTCTGCAAAATAACCAGCTGAC...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 72 bp | AAGTCTTACCTAGTCAGGAGGAATAAGAACAGGGACTaGCTTAAAGAAAAAGTCTGGCCACGTTTTTATAGA | + |
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Preference number: 4 (lower is better) Translates to: KSYLVRRNKNRD*LKEKVWPRFYR Trigger: TCTATAAAAACGTGGCCAGACTTTTTCTTTAAGCAAGTCCCTGTTCTTATTCCTCCTGACTAGGTAAGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| 3UTR CAA 72 bp | TTATCCTATTGGTTTGGGCAATTAAAACAGCCCAGGTaGGTATCAAGCAATGAGATTTATCAAAGGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSYWFGQLKQPR*VSSNEIYQRSG Trigger: TCCTGACCTTTGATAAATCTCATTGCTTGATACCAACCTGGGCTGTTTTAATTGCCCAAACCAATAGGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCTCCACATCACCTGACTaGCTGCTCCACCACTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GGLARDTGQEDLPIKYRVSTSPD*LLHHFA Trigger: AGCAAAGTGGTGGAGCAGCAAGTCAGGTGATGTGGA...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCCTTTCCCTGGTCAGTTaGTACTCTCCAAAGCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: GGLARDTGQEDLPIKYRVLSLVS*YSPKPS Trigger: TGAGGGCTTTGGAGAGTACAAACTGACCAGGGAAAG...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCCTCCATTCCTTTATTTaGAGCCTATGTATGCCACCG | + |
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Preference number: 5 (lower is better) Translates to: RLVTQTAKVVACPSLQELLHSFI*SLCMPP Trigger: CGGTGGCATACATAGGCTCAAAATAAAGGAATGGAG...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCCAGTCTGGCCATGATTaGGTAAAGCAGCTATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: GGLARDTGQEDLPIKYRVQSGHD*VKQLCC Trigger: ACAGCATAGCTGCTTTACCAAATCATGGCCAGACTG...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCCAGAAAGGATTTCATTaGCTCCTGGAAGCTCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GGLARDTGQEDLPIKYRVQKGFH*LLEALS Trigger: GGACAGAGCTTCCAGGAGCAAATGAAATCCTTTCTG...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | AGGGACTCTCTGCAGGGGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTGCTGCTCCACCACTTaGCTTGTCTCCTGGGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RDSLQGRSSTTSANYPIGCCSTT*LVSWVL Trigger: GAGCACCCAGGAGACAAGCAAAGTGGTGGAGCAGCA...ACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCCCCTGCAGAGAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | GGTGGGCTGGCTAGAGACACAGGCCAGGAGGATCTGCCCATCAAGTACAGAGTCTGTGAGATGGGTTTCTaGAAGACAGCATACTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GGLARDTGQEDLPIKYRVCEMGF*KTAYSS Trigger: ACTGGAGTATGCTGTCTTCAAGAAACCCATCTCACA...GACTCTGTACTTGATGGGCAGATCCTCCTGGCCTGTGTCTCTAGCCAGCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | GAGGCACCTCTTCTACCCCTTGTCAGCTTGGGCTCTCCAAAGCCTGCAGGCCAGTGGAAGCAGGAAAACTaGCCTTCCTTTTTGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: EAPLLPLVSLGSPKPAGQWKQEN*PSFLEM Trigger: CATTTCCAAAAAGGAAGGCAAGTTTTCCTGCTTCCA...CTGGCCTGCAGGCTTTGGAGAGCCCAAGCTGACAAGGGGTAGAAGAGGTGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | CGGCTAGTCACCCAAACAGCAAAGGTGGTGGCCTGCCCCTCTCTCCAGGAGCTCACTTCAGAAAAGGAGTaGTACAGCAAAATCAACCTT | + |
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Preference number: 5 (lower is better) Translates to: RLVTQTAKVVACPSLQELTSEKE*YSKINL Trigger: AAGGTTGATTTTGCTGTACAACTCCTTTTCTGAAGT...GAGCTCCTGGAGAGAGGGGCAGGCCACCACCTTTGCTGTTTGGGTGACTAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | GGAGAAGCTCCACAACCTCAGCAAATTATCCTATTGGTTTGGGCAATTAAAACAGCCGTAGGGGCCACCTaGCTGCAGCTCTCCACTGAT | + |
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Preference number: 5 (lower is better) Translates to: GEAPQPQQIILLVWAIKTAVGAT*LQLSTD Trigger: ATCAGTGGAGAGCTGCAGCAAGGTGGCCCCTACGGC...TGTTTTAATTGCCCAAACCAATAGGATAATTTGCTGAGGTTGTGGAGCTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTAGCTCCACCACTTTGCTaGTCTCCTGGGTGCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: FLASLDCVIHCVLHCIFVAPPLC*SPGCSI Trigger: GATGGAGCACCCAGGAGACAAGCAAAGTGGTGGAGC...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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| CDS-3UTR CAA 90 bp | TTTTTAGCATCACTGGACTGCGTAATTCACTGCGTTCTTCACTGCATTTTTGTATTAAAACAGCCCAGGTaGGTATCAAGCAATGAGATT | + |
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Preference number: 5 (lower is better) Translates to: FLASLDCVIHCVLHCIFVLKQPR*VSSNEI Trigger: AATCTCATTGCTTGATACCAACCTGGGCTGTTTTAA...TACAAAAATGCAGTGAAGAACGCAGTGAATTACGCAGTCCAGTGATGCTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000547889.6 |
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