Pregenerated sensors for POTEE (Homo sapiens)
Ensembl gene IDs: ENSG00000188219Ensembl transcript IDs: ENST00000683005.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGAGCCCCAGGGGCTCAGGCTCCAGCCTCCAGCATGCGTCGGTGCTaGTCCCTTCTACTCGTCTTCCTGCCTGGCAGGAGAAGCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: RAPGAQAPASSMRRC*SLLLVFLPGRRSSR Trigger: GCGGGAGCTTCTCCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGCATGCTGGAGGCTGGAGCCTGAGCCCCTGGGGCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS GCA 90 bp | AGGCGAGCCCCAGGGGCTCAGGCTCCAGCCTCCAGCATGCGTCGGTaGTGCTCCCTTCTACTCGTCTTCCTGCCTGGCAGGAGAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RRAPGAQAPASSMRR*CSLLLVFLPGRRSS Trigger: GGAGCTTCTCCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGCATGCTGGAGGCTGGAGCCTGAGCCCCTGGGGCTCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS GCA 90 bp | ACACAGCAAGGCGAGCCCCAGGGGCTCAGGCTCCAGCCTCCAGCATaGGTCGGTGCTGCTCCCTTCTACTCGTCTTCCTGCCTGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TQQGEPQGLRLQPPA*VGAAPFYSSSCLAG Trigger: TCCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGCATGCTGGAGGCTGGAGCCTGAGCCCCTGGGGCTCGCCTTGCTGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS GCA 90 bp | CAGCCTCCAGCATGCGTCGGTGCTGCTCCCTTCTACTCGTCTTCCTaGCTGGCAGGAGAAGCTCCCGCTACTAGTTGCCCTCCTACCGCT | + |
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Preference number: 5 (lower is better) Translates to: QPPACVGAAPFYSSS*LAGEAPATSCPPTA Trigger: AGCGGTAGGAGGGCAACTAGTAGCGGGAGCTTCTCCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGCATGCTGGAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS GCA 90 bp | TGGCTGCCATCAGTCACACGAGGCGAGCTGCAGAGTCACGCCACATaGAGGCTCCAGCGTACCACAGGTGATTCCTTCTCCTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: WLPSVTRGELQSHAT*RLQRTTGDSFSSSS Trigger: GGAGGAGGAGGAGAAGGAATCACCTGTGGTACGCTGGAGCCTGCATGTGGCGTGACTCTGCAGCTCGCCTCGTGTGACTGATGGCAGCCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS CCA 90 bp | CTCCAGCATGCGTCGGTGCTGCTCCCTTCTACTCGTCTTCCTGCCTaGCAGGAGAAGCTCCCGCTACTAGTTGCCCTCCTACCGCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LQHASVLLPSTRLPA*QEKLPLLVALLPLC Trigger: ACAGAGCGGTAGGAGGGCAACTAGTAGCGGGAGCTTCTCCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGCATGCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS CCA 90 bp | TTCAAGCCACTGAGAAGCCTCACTCCTGTCGAGCTGCAGTCTCCGTaGCTGCCATCAGTCACACGAGGCGAGCTGCAGAGTCACGCCACA | + |
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Preference number: 5 (lower is better) Translates to: FKPLRSLTPVELQSP*LPSVTRGELQSHAT Trigger: TGTGGCGTGACTCTGCAGCTCGCCTCGTGTGACTGATGGCAGCCACGGAGACTGCAGCTCGACAGGAGTGAGGCTTCTCAGTGGCTTGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS TCA 90 bp | CTACTAGTTGCCCTCCTACCGCTCTGTGGACACCACCAACTGCAGTaGGCCAGTGTCCGAGGCTCCAGCCAGAAACAGGTAGCAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: LLVALLPLCGHHQLQ*ASVRGSSQKQVAAM Trigger: CATGGCTGCTACCTGTTTCTGGCTGGAGCCTCGGACACTGGCTCACTGCAGTTGGTGGTGTCCACAGAGCGGTAGGAGGGCAACTAGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS CCA 90 bp | GGCTCCAGCGTACCACAGGTGATTCCTTCTCCTCCTCCTCCAGCCTaGCTTGGAGCAGCTAGACCGGCAAAGCCAGAAAAGCCTACACCA | + |
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Preference number: 5 (lower is better) Translates to: GSSVPQVIPSPPPPA*LGAARPAKPEKPTP Trigger: TGGTGTAGGCTTTTCTGGCTTTGCCGGTCTAGCTGCTCCAAGCCAGGCTGGAGGAGGAGGAGAAGGAATCACCTGTGGTACGCTGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS GCA 72 bp | CCAGGGGCTCAGGCTCCAGCCTCCAGCATGCGTCGGTaGTGCTCCCTTCTACTCGTCTTCCTGCCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PGAQAPASSMRR*CSLLLVFLPGR Trigger: CCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGCATGCTGGAGGCTGGAGCCTGAGCCCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS GCA 72 bp | GGGGCTCAGGCTCCAGCCTCCAGCATGCGTCGGTGCTaGTCCCTTCTACTCGTCTTCCTGCCTGGCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GAQAPASSMRRC*SLLLVFLPGRR Trigger: TCTCCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGCATGCTGGAGGCTGGAGCCTGAGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS TCA 72 bp | GCCCTCCTACCGCTCTGTGGACACCACCAACTGCAGTaGGCCAGTGTCCGAGGCTCCAGCCAGAAACAGGTA | + |
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Preference number: 6 (lower is better) Translates to: ALLPLCGHHQLQ*ASVRGSSQKQV Trigger: TACCTGTTTCTGGCTGGAGCCTCGGACACTGGCTCACTGCAGTTGGTGGTGTCCACAGAGCGGTAGGAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS GCA 72 bp | GCATGCGTCGGTGCTGCTCCCTTCTACTCGTCTTCCTaGCTGGCAGGAGAAGCTCCCGCTACTAGTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ACVGAAPFYSSS*LAGEAPATSCP Trigger: AGGGCAACTAGTAGCGGGAGCTTCTCCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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| CDS CCA 72 bp | GCGTCGGTGCTGCTCCCTTCTACTCGTCTTCCTGCCTaGCAGGAGAAGCTCCCGCTACTAGTTGCCCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: ASVLLPSTRLPA*QEKLPLLVALL Trigger: TAGGAGGGCAACTAGTAGCGGGAGCTTCTCCTGCCAGGCAGGAAGACGAGTAGAAGGGAGCAGCACCGACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683005.1 |
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