RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POTEC (Homo sapiens)

Ensembl gene IDs: ENSG00000183206

Ensembl transcript IDs: ENST00000358970.10, ENST00000511306.5

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCACGGTCCGCTTGTACAGAAGCTATGGTGTGGGCACCCGAAAGTaGCCTCTAAGCAGGTGTGGCCTGGCTGGGGTCCTGGGAGAGGCA +
Preference number: 1 (lower is better)
Translates to: GTVRLYRSYGVGTRK*PLSRCGLAGVLGEA
Trigger: TGCCTCTCCCAGGACCCCAGCCAGGCCACACCTGCTTAGAGGGCACTTTCGGGTGCCCACACCATAGCTTCTGTACAAGCGGACCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 90 bp CAGAAGCTATGGTGTGGGCACCCGAAAGTGCCCTCTAAGCAGGTGTaGCCTGGCTGGGGTCCTGGGAGAGGCAAGCAGACTAAGGGGTGC +
Preference number: 1 (lower is better)
Translates to: QKLWCGHPKVPSKQV*PGWGPGRGKQTKGC
Trigger: GCACCCCTTAGTCTGCTTGCCTCTCCCAGGACCCCAGCCAGGCCACACCTGCTTAGAGGGCACTTTCGGGTGCCCACACCATAGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 90 bp GACATAGCTGTCCCTGCCCTCCAGGCTCCACATCAGCTGACTTGCTaGTCCACTACTTTCCTTGTCTCCTGGGGGCTCCACCCCAGAGAG +
Preference number: 1 (lower is better)
Translates to: DIAVPALQAPHQLTC*STTFLVSWGLHPRE
Trigger: CTCTCTGGGGTGGAGCCCCCAGGAGACAAGGAAAGTAGTGGAGCAGCAAGTCAGCTGATGTGGAGCCTGGAGGGCAGGGACAGCTATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 90 bp AGGCTAGTGCGTGGCTGTAGAGGTCACCTTGCTGCAGCTCTCCACTaGTCAGGCACGGTCCGCTTGTACAGAAGCTATGGTGTGGGCACC +
Preference number: 1 (lower is better)
Translates to: RLVRGCRGHLAAALH*SGTVRLYRSYGVGT
Trigger: GGTGCCCACACCATAGCTTCTGTACAAGCGGACCGTGCCTGATCAGTGGAGAGCTGCAGCAAGGTGACCTCTACAGCCACGCACTAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 90 bp TGGTCTATTCTGTTAGATGGTCTTGCACATGAGATGGAGCTGGTCTaGCCTCAGCCCTCCCTAGTCTGCTTGCCTCTCCCAGGACCCCAG +
Preference number: 1 (lower is better)
Translates to: WSILLDGLAHEMELV*PQPSLVCLPLPGPQ
Trigger: CTGGGGTCCTGGGAGAGGCAAGCAGACTAGGGAGGGCTGAGGTCAGACCAGCTCCATCTCATGTGCAAGACCATCTAACAGAATAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 90 bp AGATATGGAAATGGGCACCCACATAACAGTCTGGCCACTTTTCTGTaGGGCTGCCGTGGTATGCTGGGGGTCCACTCCAGTCGCCAATTG +
Preference number: 1 (lower is better)
Translates to: RYGNGHPHNSLATFL*GCRGMLGVHSSRQL
Trigger: CAATTGGCGACTGGAGTGGACCCCCAGCATACCACGGCAGCCCCACAGAAAAGTGGCCAGACTGTTATGTGGGTGCCCATTTCCATATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 90 bp CTTGATATTCTGAGGGTAGCAAGGGCAGTTCCACTGCAGAGGCAGTaGCAGAGAGGATTTCTGTTGCTCCTGGAAGCTCTGTCCAGGGAG +
Preference number: 1 (lower is better)
Translates to: LDILRVARAVPLQRQ*QRGFLLLLEALSRE
Trigger: CTCCCTGGACAGAGCTTCCAGGAGCAACAGAAATCCTCTCTGCCACTGCCTCTGCAGTGGAACTGCCCTTGCTACCCTCAGAATATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 90 bp ATTGCCTCGTATTTTCCAGTGGCTGAAGGTATCAGCAGTGAAGCCTaGGAAAAAGCAAAGACGATAGCCTGCCCTTCCCTCTGGGAGCTC +
Preference number: 1 (lower is better)
Translates to: IASYFPVAEGISSEA*EKAKTIACPSLWEL
Trigger: GAGCTCCCAGAGGGAAGGGCAGGCTATCGTCTTTGCTTTTTCTCAGGCTTCACTGCTGATACCTTCAGCCACTGGAAAATACGAGGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 90 bp AGCTTGTTGGAGGTGTCAATATGGCACTTAGGGTCTTTGCTCCCTTaGTATTCTGAGGGTAGCAAGGGCAGTTCCACTGCAGAGGCAGTG +
Preference number: 1 (lower is better)
Translates to: SLLEVSIWHLGSLLP*YSEGSKGSSTAEAV
Trigger: CACTGCCTCTGCAGTGGAACTGCCCTTGCTACCCTCAGAATATCAAGGGAGCAAAGACCCTAAGTGCCATATTGACACCTCCAACAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 90 bp CTGGTTGAAAGGCTCCACCCAGTGATTAGAAATGTGGTTGGGGACTaGCTTAAACAAGAATCTGGCCACGTTTTCGCAGGGTGGCTGTTC +
Preference number: 1 (lower is better)
Translates to: LVERLHPVIRNVVGD*LKQESGHVFAGWLF
Trigger: GAACAGCCACCCTGCGAAAACGTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTGGAGCCTTTCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 90 bp ACGAGGAACAGGATCAGAGGCCTGCTTACAGAAGCATTCTGGACATaGTTTGGTAAAGCAGCTGTGCTATGCCACAGGATCTCTTCTGCC +
Preference number: 1 (lower is better)
Translates to: TRNRIRGLLTEAFWT*FGKAAVLCHRISSA
Trigger: GGCAGAAGAGATCCTGTGGCATAGCACAGCTGCTTTACCAAATCATGTCCAGAATGCTTCTGTAAGCAGGCCTCTGATCCTGTTCCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 90 bp TGTAGGAAGTTTCCATATAAAGGGCTGCAGTATGGAATGGTAATGTaGAGGCTAGTGCGTGGCTGTAGAGGTCACCTTGCTGCAGCTCTC +
Preference number: 1 (lower is better)
Translates to: CRKFPYKGLQYGMVM*RLVRGCRGHLAAAL
Trigger: GAGAGCTGCAGCAAGGTGACCTCTACAGCCACGCACTAGCCTGCACATTACCATTCCATACTGCAGCCCTTTATATGGAAACTTCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 90 bp AGGTATGAACCTGTTGCCAATCTCAACACACCTGTAGGATGTGACTaGAAGCAAGTTGAGAAGTCTTGCCTAGTAAGGAGGAACAGGAAT +
Preference number: 1 (lower is better)
Translates to: RYEPVANLNTPVGCD*KQVEKSCLVRRNRN
Trigger: ATTCCTGTTCCTCCTTACTAGGCAAGACTTCTCAACTTGCTTCCAGTCACATCCTACAGGTGTGTTGAGATTGGCAACAGGTTCATACCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 90 bp GTTGAATGTTGGCCTGTCTGGCTAGGTTGGGGACATTCTCATGAATaGTATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCAT +
Preference number: 1 (lower is better)
Translates to: VECWPVWLGWGHSHE*YSEMCFPSWFHSPH
Trigger: ATGAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAATGTCCCCAACCTAGCCAGACAGGCCAACATTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 90 bp ATTCTTGTTTGCCTGTTTTATTTCAGAAAGCCAGTTTTCAAGCTCTaGGATTCTTTCCTCTTCTTGGTCTATTCTGTTAGATGGTCTTGC +
Preference number: 1 (lower is better)
Translates to: ILVCLFYFRKPVFKL*DSFLFLVYSVRWSC
Trigger: GCAAGACCATCTAACAGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAAATAAAACAGGCAAACAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 90 bp TCTTTATGGGCTTATCCATCTTCAATCTTTGAGGTTGCTGACCTTTaGACAGGGTATTTTTCCTTTATTATATCTGATGACCTTGAGGAT +
Preference number: 1 (lower is better)
Translates to: SLWAYPSSIFEVADL*TGYFSFIISDDLED
Trigger: ATCCTCAAGGTCATCAGATATAATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGGATAAGCCCATAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGGCAAAGATGACAGTCTaGTCCTCCCCCTGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGAKMTV*SSPWEL
Trigger: GAGCTCCCAGGGGGAGGACCAGACTGTCATCTTTGC...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR GCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCAGACATAGCTGTCCCTaGCCTCCAGGCTCCACATCA +
Preference number: 2 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCRHSCP*PPGSTS
Trigger: TGATGTGGAGCCTGGAGGGCAGGGACAGCTATGTCT...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCAAACAACAAAGGTCATaGCCCACCCCTCTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCKQQRS*PTPLSG
Trigger: CCCAGAGAGAGGGGTGGGCCATGACCTTTGTTGTTT...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGCACGTTTTCGCAGGGTaGCTGTTCTGTGCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGHVFAG*LFCAEV
Trigger: TACCTCAGCACAGAACAGCCACCCTGCGAAAACGTG...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR GCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGACAGGATCAGAGGCCTaGTTACAGAAGCATTCTGGA +
Preference number: 2 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGTGSEA*LQKHSG
Trigger: TCCAGAATGCTTCTGTAAGCAGGCCTCTGATCCTGT...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGAATCCTCAGCACAGCACAACTGCTCTACACAAACGTGGCCAGACTTCTTTTAGTGGCTATGCTGTGTaGGGGGTTCACTTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: VNPQHSTTALHKRGQTSFSGYAV*GVHFSP
Trigger: GGGGCTGAAGTGAACCCCCCACACAGCATAGCCACT...AAAAGAAGTCTGGCCACGTTTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCCCCAGGACCCCAGCCTaGCCACACCTGCTTACAGGG +
Preference number: 2 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASPRTPA*PHLLTG
Trigger: CCCTGTAAGCAGGTGTGGCCAGGCTGGGGTCCTGGG...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 90 bp GGAACAGGATCAGAGGCCTGCTTACAGAAGCATTCTGGACATGATTaGGTAAAGCAGCTGTGCTATGCCACAGGATCTCTTCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: GTGSEACLQKHSGHD*VKQLCYATGSLLPL
Trigger: CAGGGGCAGAAGAGATCCTGTGGCATAGCACAGCTGCTTTACCAAATCATGTCCAGAATGCTTCTGTAAGCAGGCCTCTGATCCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTTCCCCCTGGGAGCTCTaGCTCAGGAGGCCTGAAACC +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPSPWEL*LRRPET
Trigger: GGTTTCAGGCCTCCTGAGTCAGAGCTCCCAGGGGGA...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTTCTGTGGGGCTGCCGTaGTATGCTGGGGGTCCACTC +
Preference number: 2 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSSVGLP*YAGGPL
Trigger: GAGTGGACCCCCAGCATACCACGGCAGCCCCACAGA...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCGAGGTAGTGCTGGTTTaGGGTGGGTGGCTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASEVVLV*GGWLAS
Trigger: ACTGGCCAGCCACCCACCCCAAACCAGCACTACCTC...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTGCCAGAGAACAGCAGTaGAGGTGGCTGGAGACCCTG +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPAREQQ*RWLETL
Trigger: CAGGGTCTCCAGCCACCTTCACTGCTGTTCTCTGGC...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTGCCCACCCCTCTCTCTaGGAACTCTGTCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSAHPSL*ELCPRK
Trigger: CTTCCTGGGACAGAGTTCCCAGAGAGAGGGGTGGGC...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAATGTCCAGGGAGTTGCTaGGTTGCTACTGGCTTGAAA +
Preference number: 2 (lower is better)
Translates to: EENSLKSESSAQHNCSTQCPGSC*VATGLK
Trigger: TTTCAAGCCAGTAGCAACTCAGCAACTCCCTGGACA...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTTGGAGTCCACTGCACTaGGGGGACCAAAGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSWSPLH*GDQSAA
Trigger: TGCTGCACTTTGGTCCCCTCAGTGCAGTGGACTCCA...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR GCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTGCAAAGACGATAGCCTaGCCTTCCCTCTGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPAKTIA*PSLWEL
Trigger: GAGCTCCCAGAGGGAAGGGCAGGCTATCGTCTTTGC...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTCTGGCCACTTTTCTGTaGGGCTGCCGTGGTATGCTG +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPLATFL*GCRGML
Trigger: CAGCATACCACGGCAGCCCCACAGAAAAGTGGCCAG...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTCACGTGAGATGGGGCTaGTCTGACCTCAGCACTCCT +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPHVRWG*SDLSTP
Trigger: AGGAGTGCTGAGGTCAGACCAGCCCCATCTCACGTG...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTCTGACTCAGGAGGCCTaGAACCTCTGTGAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: PSSIFEVADLWTGYFSFILTQEA*NLCEPE
Trigger: CTCTGGCTCACAGAGGTTTCAGGCCTCCTGAGTCAG...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTGCATTACCTCAAGGGTaGGATGCTAGCAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIALPQG*DASRGG
Trigger: CCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGC...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR GCA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAACCACATCAGCTGACTTaGTGCTCCACTACTTTCCTT +
Preference number: 2 (lower is better)
Translates to: EENSLKSESSAQHNCSTQPHQLT*CSTTFL
Trigger: AAGGAAAGTAGTGGAGCAGCAAGTCAGCTGATGTGG...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTTACCACTTCCACCCCTaGTCAGCTTGGGCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPYHFHP*SAWALQ
Trigger: TTGGAGAGCCCAAGCTGACCAGGGGTGGAAGTGGTA...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp GTGAATCCTCAGCACAGCACAACTGCTCTACACAAACGTGGCCAGACTTCTTTTATCAGCAGTGAAGCCTaGGAAAAAGCAAAGACGATA +
Preference number: 2 (lower is better)
Translates to: VNPQHSTTALHKRGQTSFISSEA*EKAKTI
Trigger: TATCGTCTTTGCTTTTTCTCAGGCTTCACTGCTGAT...AAAAGAAGTCTGGCCACGTTTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTAGGCTCCACATCAGCTaGCTTGCTGCTCCACTACTT +
Preference number: 2 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSRLHIS*LAAPLL
Trigger: AAGTAGTGGAGCAGCAAGTCAGCTGATGTGGAGCCT...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCGCTGGAGGCCTCAGGTaGGAGATCCTGTCCAGTGAC +
Preference number: 2 (lower is better)
Translates to: ILMNDILKCVFQVGSILLAGGLR*EILSSD
Trigger: GTCACTGGACAGGATCTCCCACCTGAGGCCTCCAGC...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCCCTGAAGTTGAATGTTaGCCTGTCTGGCTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASPEVEC*PVWLGW
Trigger: CCAACCTAGCCAGACAGGCCAACATTCAACTTCAGG...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTGATCTCTTCTGCCCCTaGTGGGTTTGTACTCTCCAA +
Preference number: 2 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSDLFCP*WVCTLQ
Trigger: TTGGAGAGTACAAACCCACCAGGGGCAGAAGAGATC...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTTGGCTTCATCTTCAGTaGCAGTTGGTGTGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIWLHLQ*QLVWVG
Trigger: CCCAACCCACACCAACTGCCACTGAAGATGAAGCCA...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTGTTCTGTGCCCACCATaGCTTCATCTTCAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIVLCPP*LHLQWQ
Trigger: CTGCCACTGAAGATGAAGCCATGGTGGGCACAGAAC...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTAAAGTGCAGCAGCTGTaGCAGAATGCTAGCAGATGC +
Preference number: 2 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSKVQQL*QNASRC
Trigger: GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTT...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCAGCAGTGAAGGTGGCTaGAGACCCTGGTTGAAAGGC +
Preference number: 2 (lower is better)
Translates to: ILMNDILKCVFQVGSILLSSEGG*RPWLKG
Trigger: GCCTTTCAACCAGGGTCTCCAGCCACCTTCACTGCT...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTCCTCGTATTTTCCAGTaGCTGAAGGTATCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPPRIFQ*LKVSAV
Trigger: CACTGCTGATACCTTCAGCCACTGGAAAATACGAGG...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCAAAGGCTCCACCCAGTaGTTAGAAATGTGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: ILMNDILKCVFQVGSILLKGSTQ*LEMWLG
Trigger: CCCCAACCACATTTCTAATCACTGGGTGGAGCCTTT...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTATGACCTTGAGGATTTaGTTGTGGTGTAAGGTGGAT +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPMTLRI*LWCKVD
Trigger: ATCCACCTTACACCACAATCAAATCCTCAAGGTCAT...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR GCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTTCAGCACTCCTAAAGTaGTGGGATAAAGTGTCTCAT +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPSALLK*WDKVSH
Trigger: ATGAGACACTTTATCCCAGCACTTTAGGAGTGCTGA...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCTTGCTGAGTTGCTACTaGCTTGAAAGCTCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: ILMNDILKCVFQVGSILLLLSCY*LESSSG
Trigger: CCCACTTGAGCTTTCAAGCCAGTAGCAACTCAGCAA...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTATGTGTTTTCCAAGTTaGTTCCATTCTCCTCATCTC +
Preference number: 2 (lower is better)
Translates to: VITNSLSICLSENDLVSPMCFPS*FHSPHL
Trigger: GAGATGAGGAGAATGGAACCAACTTGGAAAACACAT...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCAAACAGGAAAGATGGTaGCCTGCCTCATCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: ILMNDILKCVFQVGSILLKQERW*PASSFL
Trigger: GAGAAAAGATGAGGCAGGCCACCATCTTTCCTGTTT...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCCCTGTAGGATGTGACTaGAAGCAAGTTGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: ILMNDILKCVFQVGSILLPVGCD*KQVEKS
Trigger: AGACTTCTCAACTTGCTTCCAGTCACATCCTACAGG...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCATTCTTTCCTCTTCTTaGTCTATTCTGTTAGATGGT +
Preference number: 2 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASILSSS*SILLDG
Trigger: ACCATCTAACAGAATAGACCAAGAAGAGGAAAGAAT...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR TCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCACTTCTTTCACTCAATaGACTTTGTTCCTACCCATA +
Preference number: 2 (lower is better)
Translates to: ILMNDILKCVFQVGSILLTSFTQ*TLFLPI
Trigger: TATGGGTAGGAACAAAGTTCATTGAGTGAAAGAAGT...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp TGGTGTGGGCACCCGAAAGTGCCCTCTAAGCAGGTGTaGCCTGGCTGGGGTCCTGGGAGAGGCAAGCAGACT +
Preference number: 3 (lower is better)
Translates to: WCGHPKVPSKQV*PGWGPGRGKQT
Trigger: AGTCTGCTTGCCTCTCCCAGGACCCCAGCCAGGCCACACCTGCTTAGAGGGCACTTTCGGGTGCCCACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp CGCTTGTACAGAAGCTATGGTGTGGGCACCCGAAAGTaGCCTCTAAGCAGGTGTGGCCTGGCTGGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: RLYRSYGVGTRK*PLSRCGLAGVL
Trigger: CAGGACCCCAGCCAGGCCACACCTGCTTAGAGGGCACTTTCGGGTGCCCACACCATAGCTTCTGTACAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp GGTGGCTGTTCTGTGCTGAGGTACCACTTCCACCCCTaGTCAGCTTGGGCTCTCCAAAGCCCACAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: GGCSVLRYHFHP*SAWALQSPQAR
Trigger: TCTGGCCTGTGGGCTTTGGAGAGCCCAAGCTGACCAGGGGTGGAAGTGGTACCTCAGCACAGAACAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp TCTGTGCTGAGGTACCACTTCCACCCCTGGTCAGCTTaGGCTCTCCAAAGCCCACAGGCCAGAAGGGCTAGT +
Preference number: 3 (lower is better)
Translates to: SVLRYHFHPWSA*ALQSPQARRAS
Trigger: ACTAGCCCTTCTGGCCTGTGGGCTTTGGAGAGCCCAAGCTGACCAGGGGTGGAAGTGGTACCTCAGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp GCAAAGATGACAGTCTGGTCCTCCCCCTGGGAGCTCTaGCTCAGGAGGCCTGAAACCTCTGTGAGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: AKMTVWSSPWEL*LRRPETSVSQR
Trigger: TCTCTGGCTCACAGAGGTTTCAGGCCTCCTGAGTCAGAGCTCCCAGGGGGAGGACCAGACTGTCATCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp TGGGCTCTCCAAAGCCCACAGGCCAGAAGGGCTAGTTaGCCAAACAACAAAGGTCATGGCCCACCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: WALQSPQARRAS*PNNKGHGPPLS
Trigger: AGAGAGGGGTGGGCCATGACCTTTGTTGTTTGGGCAACTAGCCCTTCTGGCCTGTGGGCTTTGGAGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp AATGGGCACCCACATAACAGTCTGGCCACTTTTCTGTaGGGCTGCCGTGGTATGCTGGGGGTCCACTCCAGT +
Preference number: 3 (lower is better)
Translates to: NGHPHNSLATFL*GCRGMLGVHSS
Trigger: ACTGGAGTGGACCCCCAGCATACCACGGCAGCCCCACAGAAAAGTGGCCAGACTGTTATGTGGGTGCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp CCACTGATCAGGCACGGTCCGCTTGTACAGAAGCTATaGTGTGGGCACCCGAAAGTGCCCTCTAAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: PLIRHGPLVQKL*CGHPKVPSKQV
Trigger: CACCTGCTTAGAGGGCACTTTCGGGTGCCCACACCATAGCTTCTGTACAAGCGGACCGTGCCTGATCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp TGTAGCTGGAGGCCTCAGGTGGGAGATCCTGTCCAGTaGCGAGGAACAGGATCAGAGGCCTGCTTACAGAAG +
Preference number: 3 (lower is better)
Translates to: CSWRPQVGDPVQ*RGTGSEACLQK
Trigger: CTTCTGTAAGCAGGCCTCTGATCCTGTTCCTCGTCACTGGACAGGATCTCCCACCTGAGGCCTCCAGCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp CGTGGCTGTAGAGGTCACCTTGCTGCAGCTCTCCACTaGTCAGGCACGGTCCGCTTGTACAGAAGCTATGGT +
Preference number: 3 (lower is better)
Translates to: RGCRGHLAAALH*SGTVRLYRSYG
Trigger: ACCATAGCTTCTGTACAAGCGGACCGTGCCTGATCAGTGGAGAGCTGCAGCAAGGTGACCTCTACAGCCACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp GCTGAGGTCAGACCAGCCCCATCTCATGTGCAAGACTaGCCAGCACAGATCAGGTCTCAGAGGAGAACTCTC +
Preference number: 3 (lower is better)
Translates to: AEVRPAPSHVQD*PAQIRSQRRTL
Trigger: GAGAGTTCTCCTCTGAGACCTGATCTGTGCTGGGCAGTCTTGCACATGAGATGGGGCTGGTCTGACCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp AGCTGTGCTATGCCACAGGATCTCTTCTGCCCCTGGTaGGTTTGTACTCTCCAAAGCCCGCACGCTGGAATC +
Preference number: 3 (lower is better)
Translates to: SCAMPQDLFCPW*VCTLQSPHAGI
Trigger: GATTCCAGCGTGCGGGCTTTGGAGAGTACAAACCCACCAGGGGCAGAAGAGATCCTGTGGCATAGCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGGGTTTCAAATCTCCATaGGCCAGGGAACACTGGTGG +
Preference number: 3 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGGFKSP*AREHWW
Trigger: CCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACC...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp CTGTTAGATGGTCTTGCACATGAGATGGAGCTGGTCTaGCCTCAGCCCTCCCTAGTCTGCTTGCCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: LLDGLAHEMELV*PQPSLVCLPLP
Trigger: TGGGAGAGGCAAGCAGACTAGGGAGGGCTGAGGTCAGACCAGCTCCATCTCATGTGCAAGACCATCTAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp AGACCTGATCTGTGCTGGGCAATCTTGCACGTGAGATaGGGCTGGTCTGACCTCAGCACTCCTAAAGTGCTG +
Preference number: 3 (lower is better)
Translates to: RPDLCWAILHVR*GWSDLSTPKVL
Trigger: CAGCACTTTAGGAGTGCTGAGGTCAGACCAGCCCCATCTCACGTGCAAGATTGCCCAGCACAGATCAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp GATAGCCTGCCCTTCCCTCTGGGAGCTCTGTACCTCTaGGGTATGAACCTGTTGCCAATCTCAACACACCTG +
Preference number: 3 (lower is better)
Translates to: DSLPFPLGALYL*GMNLLPISTHL
Trigger: CAGGTGTGTTGAGATTGGCAACAGGTTCATACCTCAGAGGTACAGAGCTCCCAGAGGGAAGGGCAGGCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp GTACTCTCCAAAGCCCGCACGCTGGAATCGCTAAGTTaGCCAAACAGGAAAGATGGTGGCCTGCCTCATCTT +
Preference number: 3 (lower is better)
Translates to: VLSKARTLESLS*PNRKDGGLPHL
Trigger: AAGATGAGGCAGGCCACCATCTTTCCTGTTTGGGCAACTTAGCGATTCCAGCGTGCGGGCTTTGGAGAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp AAGACTGAACTGGCTGAGTCATCCAAACAGCAAAGATaGCAGTCTGGTCCTCCCCCTGGGAGCTCTGACTCA +
Preference number: 3 (lower is better)
Translates to: KTELAESSKQQR*QSGPPPGSSDS
Trigger: TGAGTCAGAGCTCCCAGGGGGAGGACCAGACTGTCATCTTTGCTGTTTGGATGACTCAGCCAGTTCAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp TGCCCTTCCCTCTGGGAGCTCTGTACCTCTGAGGTATaGACCTGTTGCCAATCTCAACACACCTGTAGGATG +
Preference number: 3 (lower is better)
Translates to: CPSLWELCTSEV*TCCQSQHTCRM
Trigger: CATCCTACAGGTGTGTTGAGATTGGCAACAGGTTCATACCTCAGAGGTACAGAGCTCCCAGAGGGAAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp GGGGTTCACTTCAGCCCCTGGTCTCCTCAGACACTCTaGAACTCTAAGACTGAACTGGCTGAGTCATCCAAA +
Preference number: 3 (lower is better)
Translates to: GVHFSPWSPQTL*NSKTELAESSK
Trigger: TTTGGATGACTCAGCCAGTTCAGTCTTAGAGTTTCAGAGTGTCTGAGGAGACCAGGGGCTGAAGTGAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp CAGAAGCATTCTGGACATGATTTGGTAAAGCAGCTGTaGTATGCCACAGGATCTCTTCTGCCCCTGGTGGGT +
Preference number: 3 (lower is better)
Translates to: QKHSGHDLVKQL*YATGSLLPLVG
Trigger: ACCCACCAGGGGCAGAAGAGATCCTGTGGCATAGCACAGCTGCTTTACCAAATCATGTCCAGAATGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp AGGGGCCAACATGCAGCTCCCAATTCTTGGACTGTGTaGTTTAACTCTGGGGAACTTGTATTGGGCCACAAC +
Preference number: 3 (lower is better)
Translates to: RGQHAAPNSWTV*FNSGELVLGHN
Trigger: GTTGTGGCCCAATACAAGTTCCCCAGAGTTAAAGCACACAGTCCAAGAATTGGGAGCTGCATGTTGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp AGGCTCCACCCAGTGATTAGAAATGTGGTTGGGGACTaGCTTAAACAAGAATCTGGCCACGTTTTCGCAGGG +
Preference number: 3 (lower is better)
Translates to: RLHPVIRNVVGD*LKQESGHVFAG
Trigger: CCCTGCGAAAACGTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp GATGGGGCTGGTCTGACCTCAGCACTCCTAAAGTGCTaGGATAAAGTGTCTCATAAGAGCAAGTGGAGCCTA +
Preference number: 3 (lower is better)
Translates to: DGAGLTSALLKC*DKVSHKSKWSL
Trigger: TAGGCTCCACTTGCTCTTATGAGACACTTTATCCCAGCACTTTAGGAGTGCTGAGGTCAGACCAGCCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp GAGGTGTCAATATGGCACTTAGGGTCTTTGCTCCCTTaGTATTCTGAGGGTAGCAAGGGCAGTTCCACTGCA +
Preference number: 3 (lower is better)
Translates to: EVSIWHLGSLLP*YSEGSKGSSTA
Trigger: TGCAGTGGAACTGCCCTTGCTACCCTCAGAATATCAAGGGAGCAAAGACCCTAAGTGCCATATTGACACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp GTCCACTCCAGTCGCCAATTGCCTCGTATTTTCCAGTaGCTGAAGGTATCAGCAGTGAAGCCTGAGAAAAAG +
Preference number: 3 (lower is better)
Translates to: VHSSRQLPRIFQ*LKVSAVKPEKK
Trigger: CTTTTTCTCAGGCTTCACTGCTGATACCTTCAGCCACTGGAAAATACGAGGCAATTGGCGACTGGAGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTCTGCCCCTGGTGGGTTaGTACTCTCCAAAGCCCGCA +
Preference number: 3 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSLPLVG*YSPKPA
Trigger: TGCGGGCTTTGGAGAGTACAAACCCACCAGGGGCAG...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTGCTCCACTACTTTCCTaGTCTCCTGGGGGCTCCACC +
Preference number: 3 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSAPLLS*SPGGST
Trigger: GGTGGAGCCCCCAGGAGACAAGGAAAGTAGTGGAGC...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp AGGATCAGAGGCCTGCTTACAGAAGCATTCTGGACATaGTTTGGTAAAGCAGCTGTGCTATGCCACAGGATC +
Preference number: 3 (lower is better)
Translates to: RIRGLLTEAFWT*FGKAAVLCHRI
Trigger: GATCCTGTGGCATAGCACAGCTGCTTTACCAAATCATGTCCAGAATGCTTCTGTAAGCAGGCCTCTGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp TATTTTCCAGTGGCTGAAGGTATCAGCAGTGAAGCCTaGGAAAAAGCAAAGACGATAGCCTGCCCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: YFPVAEGISSEA*EKAKTIACPSL
Trigger: GAGGGAAGGGCAGGCTATCGTCTTTGCTTTTTCTCAGGCTTCACTGCTGATACCTTCAGCCACTGGAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp GGCATACTCCAATGGGTCTTGGTTCTTTATCCAGCTTaGCCCCTGTGTCTTTCAATTGGAGCATTTAGCCCA +
Preference number: 3 (lower is better)
Translates to: GILQWVLVLYPA*PLCLSIGAFSP
Trigger: TGGGCTAAATGCTCCAATTGAAAGACACAGGGGGCAAGCTGGATAAAGAACCAAGACCCATTGGAGTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp CCTGTTGCCAATCTCAACACACCTGTAGGATGTGACTaGAAGCAAGTTGAGAAGTCTTGCCTAGTAAGGAGG +
Preference number: 3 (lower is better)
Translates to: PVANLNTPVGCD*KQVEKSCLVRR
Trigger: CCTCCTTACTAGGCAAGACTTCTCAACTTGCTTCCAGTCACATCCTACAGGTGTGTTGAGATTGGCAACAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAAGGACTGACTTGTTCCTaGTGTCAACTGCAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: EENSLKSESSAQHNCSTQGLTCS*CQLQLV
Trigger: AACAAGCTGCAGTTGACACAAGGAACAAGTCAGTCC...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp AGCCTATGTATGGCACTGCATGTGAGATGGGTTTCTTaGAGACGGCATACTCCAATGGGTCTTGGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: SLCMALHVRWVS*RRHTPMGLGSL
Trigger: TAAAGAACCAAGACCCATTGGAGTATGCCGTCTTCAAGAAACCCATCTCACATGCAGTGCCATACATAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp TTACTGAGGTTCTCTGGATTTCCTGAAGTTGAATGTTaGCCTGTCTGGCTAGGTTGGGGACATTCTCATGAA +
Preference number: 3 (lower is better)
Translates to: LLRFSGFPEVEC*PVWLGWGHSHE
Trigger: TTCATGAGAATGTCCCCAACCTAGCCAGACAGGCCAACATTCAACTTCAGGAAATCCAGAGAACCTCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTGCTGGAATCGCTAAGTaGCCCAAACAGGAAAGATGG +
Preference number: 3 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSAGIAK*PKQERW
Trigger: CCATCTTTCCTGTTTGGGCAACTTAGCGATTCCAGC...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTGCAGTAAGGGGTGTGTaGTACCTGTGGAAGATGGAC +
Preference number: 3 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIAVRGV*YLWKMD
Trigger: GTCCATCTTCCACAGGTACAACACACCCCTTACTGC...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTTCCACATCAGCTGACTaGCTGCTCCACTACTTTCCT +
Preference number: 3 (lower is better)
Translates to: PSSIFEVADLWTGYFSFISTSAD*LLHYFP
Trigger: AGGAAAGTAGTGGAGCAGCAAGTCAGCTGATGTGGA...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCTATTGGGCCACAACTTaGTCCTCTGGCTCCTCGAGG +
Preference number: 3 (lower is better)
Translates to: ILMNDILKCVFQVGSILLYWATT*SSGSSR
Trigger: CCTCGAGGAGCCAGAGGACAAAGTTGTGGCCCAATA...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp TGGCCTGTCTGGCTAGGTTGGGGACATTCTCATGAATaGTATTCTGAAATGTGTTTTCCAAGTTGGTTCCAT +
Preference number: 3 (lower is better)
Translates to: WPVWLGWGHSHE*YSEMCFPSWFH
Trigger: ATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAATGTCCCCAACCTAGCCAGACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp AGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTaGTCTATTCTGTTAGATGGTCTTGCACATGAGATG +
Preference number: 3 (lower is better)
Translates to: SQFSSSGILSSS*SILLDGLAHEM
Trigger: CATCTCATGTGCAAGACCATCTAACAGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTGGAAGATGGACTGACTaGTTCCTTGTGTCAACTGCA +
Preference number: 3 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIGRWTD*FLVSTA
Trigger: TGCAGTTGACACAAGGAACAAGTCAGTCCATCTTCC...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp AAGGTAGGTCTGGTGATAACGAATTCCCTCAGCATTTaGTTGTCTGAAAACGATCTTGTTTCTCCTTCACTT +
Preference number: 3 (lower is better)
Translates to: KVGLVITNSLSI*LSENDLVSPSL
Trigger: AAGTGAAGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCACCAGACCTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CCA 72 bp ATGCTGTCAGCTGGCTCTTTTGCAGACTTATGTATGTaGTTGGTTTTTAGCATCACTTGTCTGTGTACTTCA +
Preference number: 3 (lower is better)
Translates to: MLSAGSFADLCM*LVFSITCLCTS
Trigger: TGAAGTACACAGACAAGTGATGCTAAAAACCAACCACATACATAAGTCTGCAAAAGAGCCAGCTGACAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR-3UTR CAA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCTATCCTGAACTCTGCTaGTATCATTTCAGACATCTC +
Preference number: 3 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASYPELC*YHFRHL
Trigger: GAGATGTCTGAAATGATACAAGCAGAGTTCAGGATA...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp TCTGGTGATAACGAATTCCCTCAGCATTTGCTTGTCTaGAAACGATCTTGTTTCTCCTTCACTTATGATGCT +
Preference number: 3 (lower is better)
Translates to: SGDNEFPQHLLV*KRSCFSFTYDA
Trigger: AGCATCATAAGTGAAGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCACCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR GCA 72 bp TTAGTAATGGTATGTGTGGATTTGATCCTGTCATCATaGTGTCAGCTGGCTCTTTTGCAGACTTATGTATGT +
Preference number: 3 (lower is better)
Translates to: LVMVCVDLILSS*CQLALLQTYVC
Trigger: ACATACATAAGTCTGCAAAAGAGCCAGCTGACAGCATGATGACAGGATCAAATCCACACATACCATTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp ATTTTTCCTTTATTATATCTGATGACCTTGAGGATTTaGTTGTGGTGTAAGGTGGATTCAGCCAACAGGTTT +
Preference number: 3 (lower is better)
Translates to: IFPLLYLMTLRI*LWCKVDSANRF
Trigger: AAACCTGTTGGCTGAATCCACCTTACACCACAATCAAATCCTCAAGGTCATCAGATATAATAAAGGAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR TCA 72 bp TCACCATGTGACTACATTATGAAAATTCTTCTAGTGTaGTTTACAGCTCTGTCAGGTCAGTTATTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: SPCDYIMKILLV*FTALSGQLFSS
Trigger: AGAAGAAAATAACTGACCTGACAGAGCTGTAAATCACACTAGAAGAATTTTCATAATGTAGTCACATGGTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCGCCACGGGCCCCTGCTaGCTGTGTGTGCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCATGPC*LCVLLH
Trigger: GTGCAACAGCACACACAGTCAGCAGGGGCCCGTGGC...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGGCCAGAGAACAGCAGTaGAGGTGGCTGGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGAREQQ*RWLETL
Trigger: CAGGGTCTCCAGCCACCTTCACTGCTGTTCTCTGGC...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGGCTGGAGGCCTCAGGTaGGAGATCCTGTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGAGGLR*EILSSD
Trigger: GTCACTGGACAGGATCTCCCACCTGAGGCCTCCAGC...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCCTGACTCAGGAGGCCTaGAACCTCTGTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCLTQEA*NLCEPE
Trigger: CTCTGGCTCACAGAGGTTTCAGGCCTCCTGAGTCAG...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCGCAAAGATGACAGTCTaGTCCTCCCCCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCAKMTV*SSPWEL
Trigger: GAGCTCCCAGGGGGAGGACCAGACTGTCATCTTTGC...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCTTTGGGGTGGGTGGCTaGCCAGTGAAGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCFGVGG*PVKVPS
Trigger: AGAAGGCACCTTCACTGGCCAGCCACCCACCCCAAA...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGCTGGTTTGGGGTGGGTaGCTGGCCAGTGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGLVWGG*LASEGA
Trigger: GGCACCTTCACTGGCCAGCCACCCACCCCAAACCAG...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGGCCCACCCCTCTCTCTaGGAACTCTGTCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGAHPSL*ELCPRK
Trigger: CTTCCTGGGACAGAGTTCCCAGAGAGAGGGGTGGGC...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCGCATTCACCCAGTGGTaGAGGCAAAACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCAFTQW*RQNSWG
Trigger: ACCCCAGCTGTTTTGCCTCCACCACTGGGTGAATGC...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTGGAGTCCACTGCACTaGGGGGACCAAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGWSPLH*GDQSAA
Trigger: TGCTGCACTTTGGTCCCCTCAGTGCAGTGGACTCCA...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGGTGGGTTGGGGTGTGTaGTGCATTCCCATATGCTGT +
Preference number: 4 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGVGWGV*CIPICC
Trigger: ACAGCATATGGGAATGCAGCACACACCCCAACCCAC...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGCCTGCTGACTGTGTGTaGTGTTGCACTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGPADCV*CCTGGS
Trigger: ACTACCTCCAGTGCAACAGCACACACAGTCAGCAGG...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp TGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTGTAGCAGTGGCTATGCTGTGTaGGGGGTTCACTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CPRKVSNLHWPGNTGGCSSGYAV*GVHFSP
Trigger: GGGGCTGAAGTGAACCCCCCACACAGCATAGCCACT...GCTACACCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp TGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTGTAGCCTGGCCACTTTTCTGTaGGGCTGCCGTGGTATGCTG +
Preference number: 4 (lower is better)
Translates to: CPRKVSNLHWPGNTGGCSLATFL*GCRGML
Trigger: CAGCATACCACGGCAGCCCCACAGAAAAGTGGCCAG...GCTACACCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp TGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTGTAGCCACGTGAGATGGGGCTaGTCTGACCTCAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: CPRKVSNLHWPGNTGGCSHVRWG*SDLSTP
Trigger: AGGAGTGCTGAGGTCAGACCAGCCCCATCTCACGTG...GCTACACCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACCCCTCTAAGCAGGTGTaGCCTGGCTGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHPSKQV*PGWGPG
Trigger: CCCAGGACCCCAGCCAGGCCACACCTGCTTAGAGGG...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 72 bp TGCCGTGGTATGCTGGGGGTCCACTCCAGTCGCCAATaGCCTCGTATTTTCCAGTGGCTGAAGGTATCAGCA +
Preference number: 4 (lower is better)
Translates to: CRGMLGVHSSRQ*PRIFQWLKVSA
Trigger: TGCTGATACCTTCAGCCACTGGAAAATACGAGGCAATTGGCGACTGGAGTGGACCCCCAGCATACCACGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCGGGTCTTTGCTCCCTTaGTATTCTGAGGGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCGSLLP*YSEGSK
Trigger: CTTGCTACCCTCAGAATATCAAGGGAGCAAAGACCC...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTACCACTTCCACCCCTaGTCAGCTTGGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGYHFHP*SAWALQ
Trigger: TTGGAGAGCCCAAGCTGACCAGGGGTGGAAGTGGTA...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GTGAATCCTCAGCACAGCACAACTGCTCTACACAAACGTGGCCAGACTTCTTTTTCTGTGGGGCTGCCGTaGTATGCTGGGGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: VNPQHSTTALHKRGQTSFSVGLP*YAGGPL
Trigger: GAGTGGACCCCCAGCATACCACGGCAGCCCCACAGA...AAAAGAAGTCTGGCCACGTTTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 72 bp TGTACTCTCCAAAGCCCGCACGCTGGAATCGCTAAGTaGCCCAAACAGGAAAGATGGTGGCCTGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: CTLQSPHAGIAK*PKQERWWPASS
Trigger: AGATGAGGCAGGCCACCATCTTTCCTGTTTGGGCAACTTAGCGATTCCAGCGTGCGGGCTTTGGAGAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACGAGGTAGTGCTGGTTTaGGGTGGGTGGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHEVVLV*GGWLAS
Trigger: ACTGGCCAGCCACCCACCCCAAACCAGCACTACCTC...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGTCTCCTCAGACACTCTaGAACTCTAAGACTGAACTG +
Preference number: 4 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGSPQTL*NSKTEL
Trigger: CAGTTCAGTCTTAGAGTTTCAGAGTGTCTGAGGAGA...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACGCATTACCTCAAGGGTaGGATGCTAGCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHALPQG*DASRGG
Trigger: CCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGC...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCGCTGCCGTGGTATGCTaGGGGTCCACTCCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASAAVVC*GSTPVA
Trigger: GGCGACTGGAGTGGACCCCCAGCATACCACGGCAGC...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp TGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTGTAGCCCTGAAGTTGAATGTTaGCCTGTCTGGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: CPRKVSNLHWPGNTGGCSPEVEC*PVWLGW
Trigger: CCAACCTAGCCAGACAGGCCAACATTCAACTTCAGG...GCTACACCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCATGACCTTGAGGATTTaGTTGTGGTGTAAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCMTLRI*LWCKVD
Trigger: ATCCACCTTACACCACAATCAAATCCTCAAGGTCAT...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGGTATGGCACTGCATGTaGGATGGGTTTCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGVWHCM*DGFLED
Trigger: GTCTTCAAGAAACCCATCTCACATGCAGTGCCATAC...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp TGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTGTAGCGGAAAGATGGTGGCCTaGCTCATCTTTTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: CPRKVSNLHWPGNTGGCSGKMVA*LIFSLR
Trigger: TCTGAGAGAAAAGATGAGGCAGGCCACCATCTTTCC...GCTACACCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTTGCTGAGTTGCTACTaGCTTGAAAGCTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGLLSCY*LESSSG
Trigger: CCCACTTGAGCTTTCAAGCCAGTAGCAACTCAGCAA...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTCCCAGGACCCCAGCCTaGCCACACCTGCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSPRTPA*PHLLTG
Trigger: CCCTGTAAGCAGGTGTGGCCAGGCTGGGGTCCTGGG...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp TGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTGTAGCAAACAGGAAAGATGGTaGCCTGCCTCATCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: CPRKVSNLHWPGNTGGCSKQERW*PASSFL
Trigger: GAGAAAAGATGAGGCAGGCCACCATCTTTCCTGTTT...GCTACACCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACAAACAACAAAGGTCATaGCCCACCCCTCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHKQQRS*PTPLSG
Trigger: CCCAGAGAGAGGGGTGGGCCATGACCTTTGTTGTTT...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAAGTAATCACCCCAGGATaGAGGGTCTGTGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: EENSLKSESSAQHNCSTQVITPG*RVCVVG
Trigger: GCCCACAACACAGACCCTCCATCCTGGGGTGATTAC...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACTGGCTTCATCTTCAGTaGCAGTTGGTGTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHWLHLQ*QLVWVG
Trigger: CCCAACCCACACCAACTGCCACTGAAGATGAAGCCA...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GTGAATCCTCAGCACAGCACAACTGCTCTACACAAACGTGGCCAGACTTCTTTTGTTCTGTGCCCACCATaGCTTCATCTTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VNPQHSTTALHKRGQTSFVLCPP*LHLQWQ
Trigger: CTGCCACTGAAGATGAAGCCATGGTGGGCACAGAAC...AAAAGAAGTCTGGCCACGTTTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCTTTTGTAGTGGCTGGTaGTGGTCTTTTCTTTCCATA +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCFCSGW*WSFLSI
Trigger: TATGGAAAGAAAAGACCACCACCAGCCACTACAAAA...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 72 bp TCTTGGACTGTGTGCTTTAACTCTGGGGAACTTGTATaGGGCCACAACTTTGTCCTCTGGCTCCTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: SWTVCFNSGELV*GHNFVLWLLEV
Trigger: AACCTCGAGGAGCCAGAGGACAAAGTTGTGGCCCAATACAAGTTCCCCAGAGTTAAAGCACACAGTCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTGAGATGGAGCTGGTCTaGCCTCAGCCCTCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSEMELV*PQPSLV
Trigger: GACTAGGGAGGGCTGAGGTCAGACCAGCTCCATCTC...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp CACTGCACTGAGGGGACCAAAGTGCAGCAGCTGTGGCAGAATGCTAGCAGATGCCCATATCCTGAACTCTaGTTGTATCATTTCAGACAT +
Preference number: 4 (lower is better)
Translates to: HCTEGTKVQQLWQNASRCPYPEL*LYHFRH
Trigger: ATGTCTGAAATGATACAAGCAGAGTTCAGGATATGG...GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTTGGTCCCCTCAGTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGTCCCCCATTCTTGTTTaGCTGTTTTATTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGSPILV*LFYFRK
Trigger: CTTTCTGAAATAAAACAGGCAAACAAGAATGGGGGA...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTCACCCCTGGTCAGCTTaGGCTCTCCAAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSHPWSA*ALQSPQ
Trigger: CTGTGGGCTTTGGAGAGCCCAAGCTGACCAGGGGTG...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACGATTTCTGTTGCTCCTaGAAGCTCTGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHDFCCS*KLCPGS
Trigger: ACTCCCTGGACAGAGCTTCCAGGAGCAACAGAAATC...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACAAAGTGCAGCAGCTGTaGCAGAATGCTAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHKVQQL*QNASRC
Trigger: GCATCTGCTAGCATTCTGCCACAGCTGCTGCACTTT...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGGATTGTGGTGTAAGGTaGATTCAGCCAACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGDCGVR*IQPTGF
Trigger: AAAACCTGTTGGCTGAATCCACCTTACACCACAATC...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGGGGATGATCTTCTCATaGCATATCTTACTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGGMIFS*HILLRF
Trigger: GAACCTCAGTAAGATATGCCATGAGAAGATCATCCC...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCAGACATAGCTGTCCCTaGCCTCCAGGCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASRHSCP*PPGSTS
Trigger: TGATGTGGAGCCTGGAGGGCAGGGACAGCTATGTCT...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAATCAGCACAGCACAACTaGTCTACACAAACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: EENSLKSESSAQHNCSTQSAQHN*STQTWP
Trigger: TGGCCACGTTTGTGTAGAGCAGTTGTGCTGTGCTGA...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCTCCCCCTGGGAGCTCTaGCTCAGGAGGCCTGAAACC +
Preference number: 4 (lower is better)
Translates to: ILMNDILKCVFQVGSILLSPWEL*LRRPET
Trigger: GGTTTCAGGCCTCCTGAGTCAGAGCTCCCAGGGGGA...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTGCCTCAGCCCAGTTCTaGACACTTGCTGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: VITNSLSICLSENDLVSPASAQF*TLAGEL
Trigger: CAACTCTCCAGCAAGTGTTCAGAACTGGGCTGAGGC...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAAACAGGATCAGAGGCCTaGTTACAGAAGCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: EENSLKSESSAQHNCSTQTGSEA*LQKHSG
Trigger: TCCAGAATGCTTCTGTAAGCAGGCCTCTGATCCTGT...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTGCAAAGACGATAGCCTaGCCTTCCCTCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIAKTIA*PSLWEL
Trigger: GAGCTCCCAGAGGGAAGGGCAGGCTATCGTCTTTGC...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTCAGCCCCATCTCATGTaGAAGACTGCCCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSQPHLM*KTAQHR
Trigger: TCTGTGCTGGGCAGTCTTGCACATGAGATGGGGCTG...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAACCTCGTATTTTCCAGTaGCTGAAGGTATCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: EENSLKSESSAQHNCSTQPRIFQ*LKVSAV
Trigger: CACTGCTGATACCTTCAGCCACTGGAAAATACGAGG...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 72 bp TCAGAGGCCTGCTTACAGAAGCATTCTGGACATGATTaGGTAAAGCAGCTGTGCTATGCCACAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: SEACLQKHSGHD*VKQLCYATGSL
Trigger: AAGAGATCCTGTGGCATAGCACAGCTGCTTTACCAAATCATGTCCAGAATGCTTCTGTAAGCAGGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCAAAGGCTCCACCCAGTaGTTAGAAATGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASKGSTQ*LEMWLG
Trigger: CCCCAACCACATTTCTAATCACTGGGTGGAGCCTTT...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCTGTCCAGGGAGTTGCTaGGTTGCTACTGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASCPGSC*VATGLK
Trigger: TTTCAAGCCAGTAGCAACTCAGCAACTCCCTGGACA...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACTCAGCACTCCTAAAGTaGTGGGATAAAGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHSALLK*WDKVSH
Trigger: ATGAGACACTTTATCCCAGCACTTTAGGAGTGCTGA...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCGATCTCTTCTGCCCCTaGTGGGTTTGTACTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASDLFCP*WVCTLQ
Trigger: TTGGAGAGTACAAACCCACCAGGGGCAGAAGAGATC...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTAGCAGTGAAGGTGGCTaGAGACCCTGGTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PSSIFEVADLWTGYFSFISSEGG*RPWLKG
Trigger: GCCTTTCAACCAGGGTCTCCAGCCACCTTCACTGCT...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAATGTACCTGTGGAAGATaGACTGACTTGTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: EENSLKSESSAQHNCSTQCTCGR*TDLFLV
Trigger: CACAAGGAACAAGTCAGTCCATCTTCCACAGGTACA...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 72 bp TGTGTTGTACCTGTGGAAGATGGACTGACTTGTTCCTaGTGTCAACTGCAGCTTGTTGGAGGTGTCAATATG +
Preference number: 4 (lower is better)
Translates to: CVVPVEDGLTCS*CQLQLVGGVNM
Trigger: CATATTGACACCTCCAACAAGCTGCAGTTGACACAAGGAACAAGTCAGTCCATCTTCCACAGGTACAACACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCACTGGTGGGTGTAGCTaGAGGCCTCAGGTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: ILMNDILKCVFQVGSILLTGGCS*RPQVGD
Trigger: ATCTCCCACCTGAGGCCTCCAGCTACACCCACCAGT...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTCACGTTTTCGCAGGGTaGCTGTTCTGTGCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIHVFAG*LFCAEV
Trigger: TACCTCAGCACAGAACAGCCACCCTGCGAAAACGTG...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCCACTTGCTGGAGAGTTaGTGCAGTCATTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASHLLES*CSHLEK
Trigger: TTTCTCCAAATGACTGCATCAACTCTCCAGCAAGTG...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTCCACATCAGCTGACTTaGTGCTCCACTACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VITNSLSICLSENDLVSPPHQLT*CSTTFL
Trigger: AAGGAAAGTAGTGGAGCAGCAAGTCAGCTGATGTGG...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GAGGAGAACTCTCTCAAAAGTGAATCCTCAGCACAGCACAACTGCTCTACACAAGTTGATGCAGTCATTTaGAGAAAAGAAGGTATGCTG +
Preference number: 4 (lower is better)
Translates to: EENSLKSESSAQHNCSTQVDAVI*RKEGML
Trigger: CAGCATACCTTCTTTTCTCCAAATGACTGCATCAAC...TTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCACTTTTGAGAGAGTTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CACCCAGTGATTAGAAATGTGGTTGGGGACTGGCTTAAACAAGAATCTGGCCACGCAGACTTATGTATGTaGTTGGTTTTTAGCATCACT +
Preference number: 4 (lower is better)
Translates to: HPVIRNVVGDWLKQESGHADLCM*LVFSIT
Trigger: AGTGATGCTAAAAACCAACCACATACATAAGTCTGC...GTGGCCAGATTCTTGTTTAAGCCAGTCCCCAACCACATTTCTAATCACTGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 72 bp CTGTCAGCTGGCTCTTTTGCAGACTTATGTATGTGGTaGGTTTTTAGCATCACTTGTCTGTGTACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSAGSFADLCMW*VFSITCLCTSV
Trigger: CACTGAAGTACACAGACAAGTGATGCTAAAAACCAACCACATACATAAGTCTGCAAAAGAGCCAGCTGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCAGGCTCCACATCAGCTaGCTTGCTGCTCCACTACTT +
Preference number: 4 (lower is better)
Translates to: ILMNDILKCVFQVGSILLRLHIS*LAAPLL
Trigger: AAGTAGTGGAGCAGCAAGTCAGCTGATGTGGAGCCT...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTCATCAGCTGACTTGCTaGTCCACTACTTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIHQLTC*STTFLV
Trigger: GACAAGGAAAGTAGTGGAGCAGCAAGTCAGCTGATG...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCTGTTTTTGTAGTGGCTaGTGGTGGTCTTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASCFCSG*WWSFLS
Trigger: GGAAAGAAAAGACCACCACCAGCCACTACAAAAACA...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 72 bp GTAGGTCTGGTGATAACGAATTCCCTCAGCATTTGCTaGTCTGAAAACGATCTTGTTTCTCCTTCACTTATG +
Preference number: 4 (lower is better)
Translates to: VGLVITNSLSIC*SENDLVSPSLM
Trigger: CATAAGTGAAGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCACCAGACCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTTCCATTCCTTTATTTTaGGCCTATGTATGGCACTGC +
Preference number: 4 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSSIPLF*AYVWHC
Trigger: GCAGTGCCATACATAGGCTCAAAATAAAGGAATGGA...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTATCAGCAGTGAAGCCTaGGAAAAAGCAAAGACGATA +
Preference number: 4 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIISSEA*EKAKTI
Trigger: TATCGTCTTTGCTTTTTCTCAGGCTTCACTGCTGAT...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCGGTATGCTGAATTTTTaGGTTTTCAGTGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASGMLNF*VFSVLA
Trigger: TGCAAGAACACTGAAAACTCAAAAATTCAGCATACC...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCAGAGAGGATTTCTGTTaGTCCTGGAAGCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILMNDILKCVFQVGSILLREDFC*SWKLCP
Trigger: TGGACAGAGCTTCCAGGAGCAACAGAAATCCTCTCT...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCGGGTTTTTGGTTCTGTaGCCACCATGGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: ILMNDILKCVFQVGSILLGFLVL*PPWLHL
Trigger: AAGATGAAGCCATGGTGGGCACAGAACCAAAAACCC...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTGCACTCCTAAAGTGCTaGGATAAAGTGTCTCATAAG +
Preference number: 4 (lower is better)
Translates to: PSSIFEVADLWTGYFSFIALLKC*DKVSHK
Trigger: CTTATGAGACACTTTATCCCAGCACTTTAGGAGTGC...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTAAAATTCTTCTAGTGTaGTTTACAGCTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSKILLV*FTALSG
Trigger: ACCTGACAGAGCTGTAAATCACACTAGAAGAATTTT...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTTTTCTCCTTCACTTATaGTGCTTAATTTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSFLLHL*CLILLD
Trigger: GTCCAGCAAAATTAAGCATCATAAGTGAAGGAGAAA...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCAGTTTTCAGTGTTCTTaGACAGAGTCTTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASSFQCS*TESFSH
Trigger: ATGAGAAAAAGACTCTGTGCAAGAACACTGAAAACT...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTAATTCCCTCAGCATTTaGTTGTCTGAAAACGATCTT +
Preference number: 4 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSNSLSI*LSENDL
Trigger: AAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATT...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTACTTCTTTCACTCAATaGACTTTGTTCCTACCCATA +
Preference number: 4 (lower is better)
Translates to: PSSIFEVADLWTGYFSFITSFTQ*TLFLPI
Trigger: TATGGGTAGGAACAAAGTTCATTGAGTGAAAGAAGT...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCGTCAGCTGGCTCTTTTaGAGACTTATGTATGTGGTT +
Preference number: 4 (lower is better)
Translates to: ILMNDILKCVFQVGSILLVSWLF*RLMYVV
Trigger: AACCACATACATAAGTCTGCAAAAGAGCCAGCTGAC...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR GCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCGTTCTTTATCCAGCTTaGCCCCTGTGTCTTTCAATT +
Preference number: 4 (lower is better)
Translates to: ILMNDILKCVFQVGSILLVLYPA*PLCLSI
Trigger: AATTGAAAGACACAGGGGGCAAGCTGGATAAAGAAC...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CCA 90 bp GTGATAACGAATTCCCTCAGCATTTGCTTGTCTGAAAACGATCTTGTTTCTCCTATTCTTTCCTCTTCTTaGTCTATTCTGTTAGATGGT +
Preference number: 4 (lower is better)
Translates to: VITNSLSICLSENDLVSPILSSS*SILLDG
Trigger: ACCATCTAACAGAATAGACCAAGAAGAGGAAAGAAT...AGGAGAAACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGAATTCGTTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
3UTR CAA 72 bp CATCTTTATGGGCTTATCCATCTTCAATCTTTGAGGTaGCTGACCTTTGGACAGGGTATTTTTCCTTTATTA +
Preference number: 4 (lower is better)
Translates to: HLYGLIHLQSLR*LTFGQGIFPLL
Trigger: TAATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGGATAAGCCCATAAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR TCA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCTTCCTACCCATATCCTaGACTCTGCTTGTATCATTT +
Preference number: 4 (lower is better)
Translates to: ILMNDILKCVFQVGSILLFLPIS*TLLVSF
Trigger: AAATGATACAAGCAGAGTTCAGGATATGGGTAGGAA...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS CCA 90 bp GGTGGCTGTTCTGTGCTGAGGTACCACTTCCACCCCTGGTCAGCTTaGGCTCTCCAAAGCCCACAGGCCAGAAGGGCTAGTTGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: GGCSVLRYHFHPWSA*ALQSPQARRASCPN
Trigger: GTTTGGGCAACTAGCCCTTCTGGCCTGTGGGCTTTGGAGAGCCCAAGCTGACCAGGGGTGGAAGTGGTACCTCAGCACAGAACAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358970.10
ENST00000511306.5
CDS-3UTR CAA 90 bp CCCTTTTCCTCTGCACAGCATTACCTCAAGGGTGAGATGCTAGCAGGGGTGGGGGCTCCACTACTTTCCTaGTCTCCTGGGGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: PFSSAQHYLKGEMLAGVGAPLLS*SPGGST
Trigger: GGTGGAGCCCCCAGGAGACAAGGAAAGTAGTGGAGC...CCCCACCCCTGCTAGCATCTCACCCTTGAGGTAATGCTGTGCAGAGGAAAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS CCA 90 bp GGGCTAGTTGCCCAAACAACAAAGGTCATGGCCCACCCCTCTCTCTaGGAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GLVAQTTKVMAHPSL*ELCPRKVSNLHWPG
Trigger: CCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTCCCAGAGAGAGGGGTGGGCCATGACCTTTGTTGTTTGGGCAACTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358970.10
ENST00000511306.5
CDS-3UTR CAA 90 bp GTGAATCCTCAGCACAGCACAACTGCTCTACACAAACGTGGCCAGACTTCTTTTCCACCCCTGGTCAGCTaGGGCTCTCCAAAGCCCACA +
Preference number: 5 (lower is better)
Translates to: VNPQHSTTALHKRGQTSFPPLVS*GSPKPT
Trigger: TGTGGGCTTTGGAGAGCCCAAGCTGACCAGGGGTGG...AAAAGAAGTCTGGCCACGTTTGTGTAGAGCAGTTGTGCTGTGCTGAGGATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp TGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGTGTAGCTATTGGGCCACAACTTaGTCCTCTGGCTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: CPRKVSNLHWPGNTGGCSYWATT*SSGSSR
Trigger: CCTCGAGGAGCCAGAGGACAAAGTTGTGGCCCAATA...GCTACACCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGGCAGTAAGGGGTGTGTaGTACCTGTGGAAGATGGAC +
Preference number: 5 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGAVRGV*YLWKMD
Trigger: GTCCATCTTCCACAGGTACAACACACCCCTTACTGC...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp GAACTCTGTCCCAGGAAGGTTTCAAATCTCCATTGGCCAGGGAACACTGGTGGGGCTGGAATCGCTAAGTaGCCCAAACAGGAAAGATGG +
Preference number: 5 (lower is better)
Translates to: ELCPRKVSNLHWPGNTGGAGIAK*PKQERW
Trigger: CCATCTTTCCTGTTTGGGCAACTTAGCGATTCCAGC...CCCACCAGTGTTCCCTGGCCAATGGAGATTTGAAACCTTCCTGGGACAGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTGGAGGTAGTGCTGGTTaGGGGTGGGTGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSGGSAG*GWVAGQ
Trigger: CTGGCCAGCCACCCACCCCAAACCAGCACTACCTCC...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCCTGCCCCTGGTGGGTTaGTACTCTCCAAAGCCCGCA +
Preference number: 5 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASLPLVG*YSPKPA
Trigger: TGCGGGCTTTGGAGAGTACAAACCCACCAGGGGCAG...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCGATGGAGGGTCTGTGTaGTGGGCCCAAGCCACGGTT +
Preference number: 5 (lower is better)
Translates to: ILMNDILKCVFQVGSILLDGGSV*WAQATV
Trigger: AACCGTGGCTTGGGCCCACAACACAGACCCTCCATC...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTTCCACATCAGCTGACTaGCTGCTCCACTACTTTCCT +
Preference number: 5 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSSTSAD*LLHYFP
Trigger: AGGAAAGTAGTGGAGCAGCAAGTCAGCTGATGTGGA...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp CCATCTTCAATCTTTGAGGTTGCTGACCTTTGGACAGGGTATTTTTCCTTTATTCTGGATTTCCTGAAGTaGAATGTTGGCCTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: PSSIFEVADLWTGYFSFILDFLK*NVGLSG
Trigger: GCCAGACAGGCCAACATTCAACTTCAGGAAATCCAG...AATAAAGGAAAAATACCCTGTCCAAAGGTCAGCAACCTCAAAGATTGAAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp GTGTGTTTTTGTAGTGGCTGGTGGTGGTCTTTTCTTTCCATATTTAGTGCTTCCTCCCTCAGCATTTGCTaGTCTGAAAACGATCTTGTT +
Preference number: 5 (lower is better)
Translates to: VCFCSGWWWSFLSIFSASSLSIC*SENDLV
Trigger: AACAAGATCGTTTTCAGACAAGCAAATGCTGAGGGA...GGAAGCACTAAATATGGAAAGAAAAGACCACCACCAGCCACTACAAAAACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp TTCAGAAAGCCAGTTTTCAAGCTCTGGGATTCTTTCCTCTTCTTGGTCTATTCTTGTCAGCTGGCTCTTTaGCAGACTTATGTATGTGGT +
Preference number: 5 (lower is better)
Translates to: FRKPVFKLWDSFLFLVYSCQLAL*QTYVCG
Trigger: ACCACATACATAAGTCTGCAAAAGAGCCAGCTGACA...AGAATAGACCAAGAAGAGGAAAGAATCCCAGAGCTTGAAAACTGGCTTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511306.5
CDS-3UTR CAA 90 bp ATTCTCATGAATGATATTCTGAAATGTGTTTTCCAAGTTGGTTCCATTCTCCTCTTCAGCCAACAGGTTTaGTTTTTGGAGGATTTTAAG +
Preference number: 5 (lower is better)
Translates to: ILMNDILKCVFQVGSILLFSQQV*FLEDFK
Trigger: CTTAAAATCCTCCAAAAACAAAACCTGTTGGCTGAA...GAGGAGAATGGAACCAACTTGGAAAACACATTTCAGAATATCATTCATGAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511306.5