RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PORCN (Homo sapiens)

Ensembl gene IDs: ENSG00000102312

Ensembl transcript IDs: ENST00000326194.11, ENST00000355961.8, ENST00000359882.8, ENST00000361988.7, ENST00000367574.9, ENST00000459953.1, ENST00000470275.2, ENST00000472520.5, ENST00000485288.7, ENST00000486272.1, ENST00000489940.5, ENST00000491243.5, ENST00000528612.5, ENST00000537758.6, ENST00000682661.1, ENST00000683804.1, ENST00000683923.1, ENST00000684722.1

Found 570 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCA +
Preference number: 1 (lower is better)
Translates to: SRARRRWCPRSRGSP*TPLARAPYPPRPGP
Trigger: TGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR TCA 90 bp CAGGCCCAAGCGATGCTGGTGCGAACAGTCTGGCGGGCACCGCTTTaGCAAGACACAGGCACTGAGGATCCGAGCCAGGCGCTTCCGGAG +
Preference number: 1 (lower is better)
Translates to: QAQAMLVRTVWRAPL*QDTGTEDPSQALPE
Trigger: CTCCGGAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR TCA 90 bp GGTGCGAACAGTCTGGCGGGCACCGCTTTGACAAGACACAGGCACTaGGGATCCGAGCCAGGCGCTTCCGGAGGACATGCTCCACGTAAG +
Preference number: 1 (lower is better)
Translates to: GANSLAGTALTRHRH*GSEPGASGGHAPRK
Trigger: CTTACGTGGAGCATGTCCTCCGGAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR GCA 90 bp CACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTaGCTTCATGGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCA +
Preference number: 1 (lower is better)
Translates to: HRTHLAPVQVEAQRH*LHGHNHLCPSHLVP
Trigger: TGGCACAAGATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR TCA 90 bp CCAACGTGGCCGTGGCCTCGGAAAGAAAGCCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACCTCG +
Preference number: 1 (lower is better)
Translates to: PTWPWPRKESPQNSC*SGRRQHSRRLAATS
Trigger: CGAGGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGCTTTCTTTCCGAGGCCACGGCCACGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472520.5
3UTR TCA 90 bp CCAACGTGGCCGTGGCCTCGGAAAGAAAGCCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACTTGC +
Preference number: 1 (lower is better)
Translates to: PTWPWPRKESPQNSC*SGRRQHSRRLAATC
Trigger: GCAAGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGCTTTCTTTCCGAGGCCACGGCCACGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR TCA 90 bp CCAATAAGACATGGGCAGGTTCCAGCTTGTGACAACTTCCACCATTaGCCGAGGCAGCTCCACATTCAGTGGCTTGGACACCGTCAGGTC +
Preference number: 1 (lower is better)
Translates to: PIRHGQVPACDNFHH*PRQLHIQWLGHRQV
Trigger: GACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGCCCATGTCTTATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR TCA 90 bp AAACATAGTTATTTAGCCAATAAGACATGGGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACCGAGGCAGCTCCACATTCAGTGGCT +
Preference number: 1 (lower is better)
Translates to: KHSYLANKTWAGSSL*QLPPLTEAAPHSVA
Trigger: AGCCACTGAATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGCCCATGTCTTATTGGCTAAATAACTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR GCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGCTCCGGGCCACCTTCTaGAGCCACCGGCAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGLRATF*SHRQLS
Trigger: ACTGAGCTGCCGGTGGCTGCAGAAGGTGGCCCGGAG...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR-3UTR CCA 90 bp TCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAACAGTCTGGCGGGCACCGCTTCTCATCCCCCATCAGTaGCACCCTGAGAGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: SHPQAQAMLVRTVWRAPLLIPHQ*HPERGL
Trigger: AAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAG...AAGCGGTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGGGGTGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp AGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGTGCCAGGCTCCAGGGCCCGAAGACGATaGTGCCCACGAAGTAGAGGT +
Preference number: 2 (lower is better)
Translates to: RGPRKWTAQGTAGPVPGSRARRR*CPRSRG
Trigger: ACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCT...GGAGCCTGGCACTGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
3UTR-3UTR GCA 90 bp GCTGAAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACTTGCGAAGGAGGCACAGCAGGGCCAGTaGCAGGCTCCGGGCCACCTT +
Preference number: 2 (lower is better)
Translates to: AEVEGDSTLVGSQPLAKEAQQGQ*QAPGHL
Trigger: AAGGTGGCCCGGAGCCTGGCACTGGCCCTGCTGTGC...CTCCTTCGCAAGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR-3UTR CCA 90 bp TTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAACAGTCTGGCGGGCCTCATCCCCCATCAGTaGCACCCTGAGAGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: LRLAPPGPSDAGANSLAGLIPHQ*HPERGL
Trigger: AAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAG...GCCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR TCA 90 bp GAAGAGGTAGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGTGCAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCA +
Preference number: 2 (lower is better)
Translates to: EEVGAHASGQHKAQQGQCSRGSP*TPLARA
Trigger: TGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACT...GCACTGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCTACCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
3UTR-3UTR GCA 90 bp ACGGGAAGAGGTAGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGCCCGAAGACGATGGTaGCCACGAAGTAGAGGTAGC +
Preference number: 2 (lower is better)
Translates to: TGRGRGPRKWTAQGTAGPARRRW*PRSRGS
Trigger: GCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGC...TGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCTACCTCTTCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
3UTR-3UTR CCA 90 bp GTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAGGAGACACTGCCTTCATaGCCACAATCATCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: VAHELHWRGHRTHLAPVQETLPS*PQSSVP
Trigger: GGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTC...CTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR-3UTR CCA 90 bp AAGAGCAAGTTTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAACAGCCACCGGCAGCTCAGTaGGCGGCCTTGGACAGCTTG +
Preference number: 2 (lower is better)
Translates to: KSKFKARTPRPKRCWCEQPPAAQ*AALDSL
Trigger: CAAGCTGTCCAAGGCCGCCCACTGAGCTGCCGGTGG...CTGTTCGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAAACTTGCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR-3UTR CCA 90 bp AGGGACAGCAGGACCGCAGCCAGGTGGAAACTGAAGCCATGTAGGAGGGCGCTGAGGGGCCCACGCAAGTaGACAGCACAAGGCACAGCA +
Preference number: 2 (lower is better)
Translates to: RDSRTAARWKLKPCRRALRGPRK*TAQGTA
Trigger: TGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT...CAGCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCTGCTGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR-3UTR GCA 90 bp AAGGAGGCGGTCACCGTTGAGGGGGATGAAGTACGGGAAGAGGTAGGGGCCCACGCCCCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 2 (lower is better)
Translates to: KEAVTVEGDEVREEVGAHAPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGGGC...GTGGGCCCCTACCTCTTCCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
3UTR-3UTR GCA 90 bp GGTGCCCACGAAGTAGAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCGCCCCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 2 (lower is better)
Translates to: GAHEVEVAHELHWRGHRTAPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGGGC...GGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR-3UTR CCA 90 bp TTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAACAGTCTGGCGGGCCCACATTCAGTGGCTTaGACACCGTCAGGTCCCATT +
Preference number: 2 (lower is better)
Translates to: LRLAPPGPSDAGANSLAGPHSVA*TPSGPI
Trigger: AATGGGACCTGACGGTGTCCAAGCCACTGAATGTGG...GCCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCCGCTGGCTGCATAGGTaGCCAGCACAGCCGAGAAGG +
Preference number: 2 (lower is better)
Translates to: QWHPERGLKRVMRVHRCARWLHR*PAQPRR
Trigger: CCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCG...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR GCA 90 bp CCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTAGGCTCGCAGCCACTTaGGAAGGAGGCGGTCACCGT +
Preference number: 2 (lower is better)
Translates to: PLWCHPHRHQTGSPGRPGRLAAT*EGGGHR
Trigger: ACGGTGACCGCCTCCTTCGCAAGTGGCTGCGAGCCT...ACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR-3UTR CCA 90 bp TGCTGGTGCGAACAGTCTGGCGGGCACCGCTTTGACAAGACACAGGCACTGAGGAAGGCGGGGAGGCCCTaGATCTCCCCTTCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: CWCEQSGGHRFDKTQALRKAGRP*ISPSLF
Trigger: AAACAGAGAAGGGGAGATCCAGGGCCTCCCCGCCTT...CCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp AGGCAGCTCCACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCGCCCATGAACTCCACTaGCGAGGGCACCGTACCCAC +
Preference number: 2 (lower is better)
Translates to: RQLHIQWLGHRQVPFQVIAHELH*RGHRTH
Trigger: GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGC...GATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCACAAGACACAGGCACTaGGGATCCGAGCCAGGCGCT +
Preference number: 2 (lower is better)
Translates to: QWHPERGLKRVMRVHRCATRHRH*GSEPGA
Trigger: AGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR TCA 90 bp CCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTACAAGACACAGGCACTaGGGATCCGAGCCAGGCGCT +
Preference number: 2 (lower is better)
Translates to: PLWCHPHRHQTGSPGRPGTRHRH*GSEPGA
Trigger: AGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGT...ACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTGCCTTGTGGTGGGGTaGGGATTGACAGGCATGAAA +
Preference number: 2 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGCLVVG*GLTGMK
Trigger: TTTCATGCCTGTCAATCCCCACCCCACCACAAGGCA...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp CTCCAAAGAGCAAGTTTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAGGACCGCAGCCAGGTaGAAACTGAAGCCATGTAGG +
Preference number: 2 (lower is better)
Translates to: LQRASLRLAPPGPSDAGARTAAR*KLKPCR
Trigger: CCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCT...CGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAAACTTGCTCTTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR GCA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATGCCCCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 2 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHAPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGGGC...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR-3UTR GCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCCTTGTGGACAGTGTATaGCATGCCGTAGCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QWHPERGLKRVMRVHRCALVDSV*HAVALL
Trigger: GAGCAGGGCTACGGCATGGCATACACTGTCCACAAG...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGTTGGGGGTCAAGGATaGAGGGGGTCAAGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAVGGQG*RGSRSR
Trigger: TCTACTCCTTGACCCCCTCCATCCTTGACCCCCAAC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp TGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTGGAAAAGGCGGGGAGGCCCTaGATCTCCCCTTCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: CGVIHIDIKQGAQVGQVEKAGRP*ISPSLF
Trigger: AAACAGAGAAGGGGAGATCCAGGGCCTCCCCGCCTT...TTCCACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp TGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTGGAAAGGGCCCGAAGACGATaGTGCCCACGAAGTAGAGGT +
Preference number: 2 (lower is better)
Translates to: CGVIHIDIKQGAQVGQVERARRR*CPRSRG
Trigger: ACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCT...TTCCACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCTGCCTTGTGGTGGGGTaGGGATTGACAGGCATGAAA +
Preference number: 2 (lower is better)
Translates to: QWHPERGLKRVMRVHRCACLVVG*GLTGMK
Trigger: TTTCATGCCTGTCAATCCCCACCCCACCACAAGGCA...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp GTAGCCCTGCTCCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGCCACATTCAGTGGCTTaGACACCGTCAGGTCCCATT +
Preference number: 2 (lower is better)
Translates to: VALLLCGVIHIDIKQGAQPHSVA*TPSGPI
Trigger: AATGGGACCTGACGGTGTCCAAGCCACTGAATGTGG...CTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGGAGCAGGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR TCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGGGCATGAAAATGGTGTaGTTTTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGGMKMV*FCVCVC
Trigger: ACACACACACACACAAAATCACACCATTTTCATGCC...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR TCA 90 bp TGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTGGAAGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACC +
Preference number: 2 (lower is better)
Translates to: CGVIHIDIKQGAQVGQVEAGSSL*QLPPLT
Trigger: GGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGC...TTCCACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR TCA 90 bp TGTGCCTCAGCCTATGAGACGGTAGAAGATCCAGCATCCAAAAGTGACCCAGTGGACAACTTCCACCATTaGCCGAGGCAGCTCCACATT +
Preference number: 2 (lower is better)
Translates to: CASAYETVEDPASKSDPVDNFHH*PRQLHI
Trigger: AATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTC...CACTGGGTCACTTTTGGATGCTGGATCTTCTACCGTCTCATAGGCTGAGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGGCATGAAAATGGTGTaGTTTTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAGMKMV*FCVCVC
Trigger: ACACACACACACACAAAATCACACCATTTTCATGCC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGCTCATCCCCCATCAGTaGCACCCTGAGAGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: HENGVILCVCVCVCVEVLLIPHQ*HPERGL
Trigger: AAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAG...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGAAGGCGGGGAGGCCCTaGATCTCCCCTTCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: HENGVILCVCVCVCVEVLKAGRP*ISPSLF
Trigger: AAACAGAGAAGGGGAGATCCAGGGCCTCCCCGCCTT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGGTTGGGGGTCAAGGATaGAGGGGGTCAAGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: HENGVILCVCVCVCVEVLVGGQG*RGSRSR
Trigger: TCTACTCCTTGACCCCCTCCATCCTTGACCCCCAAC...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGTGCCTTGTGGTGGGGTaGGGATTGACAGGCATGAAA +
Preference number: 2 (lower is better)
Translates to: HENGVILCVCVCVCVEVLCLVVG*GLTGMK
Trigger: TTTCATGCCTGTCAATCCCCACCCCACCACAAGGCA...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR TCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGGGCATGAAAATGGTGTaGTTTTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: HENGVILCVCVCVCVEVLGMKMV*FCVCVC
Trigger: ACACACACACACACAAAATCACACCATTTTCATGCC...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR CCA 72 bp GGTGCCCACGAAGTAGAGGTAGCCCATGAACTCCACTaGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAG +
Preference number: 3 (lower is better)
Translates to: GAHEVEVAHELH*RGHRTHLAPVQ
Trigger: CTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR TCA 72 bp GCGATGCTGGTGCGAACAGTCTGGCGGGCACCGCTTTaGCAAGACACAGGCACTGAGGATCCGAGCCAGGCG +
Preference number: 3 (lower is better)
Translates to: AMLVRTVWRAPL*QDTGTEDPSQA
Trigger: CGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CAA 90 bp TGCTGGTGCGAACAGTCTGGCGGGCACCGCTTTGACAAGACACAGGCACTGAGGAGGAGGCGGTCACCGTaGAGGGGGATGAAGTACGGG +
Preference number: 3 (lower is better)
Translates to: CWCEQSGGHRFDKTQALRRRRSP*RGMKYG
Trigger: CCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCT...CCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485288.7
3UTR TCA 72 bp CGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCACCGTACCCACCTCGC +
Preference number: 3 (lower is better)
Translates to: RRRWCPRSRGSP*TPLARAPYPPR
Trigger: GCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR GCA 72 bp CACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTaGCTTCATGGCCACAATCATCTGTGCCCCTCGCAT +
Preference number: 3 (lower is better)
Translates to: HLAPVQVEAQRH*LHGHNHLCPSH
Trigger: ATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR-3UTR CAA 90 bp CCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATGTGCCCCTCGCATCTaGTGCCATGTCACGGTGTCT +
Preference number: 3 (lower is better)
Translates to: PRPGPGRSPETLPSWPQSCAPRI*CHVTVS
Trigger: AGACACCGTGACATGGCACAAGATGCGAGGGGCACA...TGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
3UTR GCA 72 bp TTTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTaGGAACAGTCTGGCGGGCACCGCTTTGACAAGACA +
Preference number: 3 (lower is better)
Translates to: FKARTPRPKRCW*EQSGGHRFDKT
Trigger: TGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR CCA 72 bp GGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTaGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGG +
Preference number: 3 (lower is better)
Translates to: GVERGPSLIPHQ*HPERGLKRVMR
Trigger: CCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CAA 90 bp CCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCAT +
Preference number: 3 (lower is better)
Translates to: PLWCHPHRHQTGSPGRPGSTFSG*DTVRSH
Trigger: ATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGA...ACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR-3UTR CAA 90 bp GTAGCCCTGCTCCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCAT +
Preference number: 3 (lower is better)
Translates to: VALLLCGVIHIDIKQGAQSTFSG*DTVRSH
Trigger: ATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGA...CTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGGAGCAGGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR CCA 72 bp CCACCATTGACCGAGGCAGCTCCACATTCAGTGGCTTaGACACCGTCAGGTCCCATTCCAGGTGATCCTTCT +
Preference number: 3 (lower is better)
Translates to: PPLTEAAPHSVA*TPSGPIPGDPS
Trigger: AGAAGGATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCTCGGTCAATGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR TCA 72 bp CATGGGCAGGTTCCAGCTTGTGACAACTTCCACCATTaGCCGAGGCAGCTCCACATTCAGTGGCTTGGACAC +
Preference number: 3 (lower is better)
Translates to: HGQVPACDNFHH*PRQLHIQWLGH
Trigger: GTGTCCAAGCCACTGAATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR TCA 72 bp CCGTGGCCTCGGAAAGAAAGCCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCA +
Preference number: 3 (lower is better)
Translates to: PWPRKESPQNSC*SGRRQHSRRLA
Trigger: TGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGCTTTCTTTCCGAGGCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
3UTR TCA 72 bp TATTTAGCCAATAAGACATGGGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACCGAGGCAGCTCCACAT +
Preference number: 3 (lower is better)
Translates to: YLANKTWAGSSL*QLPPLTEAAPH
Trigger: ATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGCCCATGTCTTATTGGCTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAGGCACAGCAGGGCCAGTaGCAGGCTCCGGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: VAHELHWRGHRTHLAPVQAQQGQ*QAPGHL
Trigger: AAGGTGGCCCGGAGCCTGGCACTGGCCCTGCTGTGC...CTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GGGCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCCACCGGCAGCTCAGTaGGCGGCCTTGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GHRTHLAPVQVEAQRHCLPPAAQ*AALDSL
Trigger: CAAGCTGTCCAAGGCCGCCCACTGAGCTGCCGGTGG...AAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR TCA 90 bp ACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACTGGCGGGCACCGCTTTaGCAAGACACAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TGEGTVPTSPRSRSKPRDWRAPL*QDTGTE
Trigger: CTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCA...GTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp CCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PLARAPYPPRPGPGRSPEIWSRP*WAVGRR
Trigger: TCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGAT...CTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGCACAGCAGGGCCAGTaGCAGGCTCCGGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPAQQGQ*QAPGHL
Trigger: AAGGTGGCCCGGAGCCTGGCACTGGCCCTGCTGTGC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp TTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAACAGTCTGGCGGGCCCCAAGCGATGCTGGTaGGAACAGTCTGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: LRLAPPGPSDAGANSLAGPKRCW*EQSGGH
Trigger: GTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGG...GCCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAGCCCATGAACTCCACTaGCGAGGGCACCGTACCCAC +
Preference number: 4 (lower is better)
Translates to: PTSPRSRSKPRDTAFMATAHELH*RGHRTH
Trigger: GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGC...TGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCAGGGGCCCACGCAAGTaGACAGCACAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: EVAHELHWRGHRTHLAPVRGPRK*TAQGTA
Trigger: TGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT...GACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR TCA 90 bp GAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EVAHELHWRGHRTHLAPVSRGSP*TPLARA
Trigger: TGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACT...GACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCCTCCGGGCCACCTTCTaGAGCCACCGGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPLRATF*SHRQLS
Trigger: ACTGAGCTGCCGGTGGCTGCAGAAGGTGGCCCGGAG...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: VPTSPRSRSKPRDTAFMAGRRGR*QGAARS
Trigger: AGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCC...GGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGTGCCAGGCTCCAGGAAGACGCCTCGATaGGAGGAATGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RGPRKWTAQGTAGPVPGSRKTPR*EECRQR
Trigger: CCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCCT...GGAGCCTGGCACTGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCAGGGCCCGAAGACGATaGTGCCCACGAAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: EVAHELHWRGHRTHLAPVRARRR*CPRSRG
Trigger: ACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCT...GACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGCAGCCCCCGCCAACGTaGCCGTGGCCTCGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGQPPPT*PWPRKE
Trigger: TTCTTTCCGAGGCCACGGCCACGTTGGCGGGGGCTG...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCCGCTGGCTGCATAGGTaGCCAGCACAGCCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPRWLHR*PAQPRR
Trigger: CCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCG...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGCGCTGGCTGCATAGGTaGCCAGCACAGCCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGRWLHR*PAQPRR
Trigger: CCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCG...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCGGGCACCGCTTTGACAAGACACAGGCACTGAGGATCCGAGCCAGGCGCTTCCAGCCAGGTGGAAACTaGAGCCATGTAGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GGHRFDKTQALRIRARRFQPGGN*SHVGGR
Trigger: GCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTG...GAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCAATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: APYPPRPGPGRSPETLPSIWSRP*WAVGRR
Trigger: TCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGAT...TGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp CCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGGCCCGAAGACGATGGTaGCCACGAAGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PYPPRPGPGRSPETLPSWARRRW*PRSRGS
Trigger: GCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGC...CCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCTCCGGGCCACCTTCTaGAGCCACCGGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKLRATF*SHRQLS
Trigger: ACTGAGCTGCCGGTGGCTGCAGAAGGTGGCCCGGAG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp CAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGGCACAGCAGGGCCAGTaGCAGGCTCCGGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: QVEAQRHCLHGHNHLCPSAQQGQ*QAPGHL
Trigger: AAGGTGGCCCGGAGCCTGGCACTGGCCCTGCTGTGC...CGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGCCCAAGCGATGCTGGTaGGAACAGTCTGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGPKRCW*EQSGGH
Trigger: GTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGG...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGCCCAGGCCCAAGCGATaGTGGTGCGAACAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGPRPKR*WCEQSG
Trigger: GCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGG...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GCCCACGAAGTAGAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCCCAGGCCCAAGCGATaGTGGTGCGAACAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AHEVEVAHELHWRGHRTHPRPKR*WCEQSG
Trigger: GCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGG...GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGAGGCTCGCAGCCACTTaGGAAGGAGGCGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGRLAAT*EGGGHR
Trigger: ACGGTGACCGCCTCCTTCGCAAGTGGCTGCGAGCCT...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGGCAGGAAAGAAGCCGTaGTCCTGGGGACCGAGGACG +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGAGKKP*SWGPRT
Trigger: CGTCCTCGGTCCCCAGGACCACGGCTTCTTTCCTGC...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGAGGTAGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGTGCCAAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RGRGPRKWTAQGTAGPVPRSSQI*SRPCWA
Trigger: TGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCT...TGGCACTGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCTACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp CCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAAAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPRPGPGRSPETLPSWPQRSSQI*SRPCWA
Trigger: TGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCT...TTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp CCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCAGCCCATGAACTCCACTaGCGAGGGCACCGTACCCAC +
Preference number: 4 (lower is better)
Translates to: PRPGPGRSPETLPSWPQSAHELH*RGHRTH
Trigger: GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGC...TGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCAGGGCCCGAAGACGATaGTGCCCACGAAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: VPTSPRSRSKPRDTAFMARARRR*CPRSRG
Trigger: ACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCT...GGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCCACCGGCAGCTCAGTaGGCGGCCTTGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKPPAAQ*AALDSL
Trigger: CAAGCTGTCCAAGGCCGCCCACTGAGCTGCCGGTGG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGCCGCCAACGTGGCCGTaGCCTCGGAAAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGPPTWP*PRKESP
Trigger: TGGGCTTTCTTTCCGAGGCCACGGCCACGTTGGCGG...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCAGCCCCCGCCAACGTaGCCGTGGCCTCGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKQPPPT*PWPRKE
Trigger: TTCTTTCCGAGGCCACGGCCACGTTGGCGGGGGCTG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTCAGCCCCCGCCAACGTaGCCGTGGCCTCGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVQPPPT*PWPRKE
Trigger: TTCTTTCCGAGGCCACGGCCACGTTGGCGGGGGCTG...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGAGGCCCAAGCGATGCTaGTGCGAACAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGRPKRC*CEQSGG
Trigger: CCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCT...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAGGCCCAAGCGATGCTaGTGCGAACAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPRPKRC*CEQSGG
Trigger: CCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GTGATCCTTCTCCTCGGTAAAGCCAGCCCCCGCCAACGTGGCCGTGGCCTCGGAAAGGCGGGGAGGCCCTaGATCTCCCCTTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VILLLGKASPRQRGRGLGKAGRP*ISPSLF
Trigger: AAACAGAGAAGGGGAGATCCAGGGCCTCCCCGCCTT...TCCGAGGCCACGGCCACGTTGGCGGGGGCTGGCTTTACCGAGGAGAAGGATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGGCGGGCACCGCTTTaGCAAGACACAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPWRAPL*QDTGTE
Trigger: CTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCA...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GGCGGGCACCGCTTTGACAAGACACAGGCACTGAGGATCCGAGCCAGGCGCTTCATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GGHRFDKTQALRIRARRFIWSRP*WAVGRR
Trigger: TCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGAT...GAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp ACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACGGTGTCTACCATGTaGATCTCACCCATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TGEGTVPTSPRSRSKPRDTVSTM*ISPMSR
Trigger: CCTACTCATGGGTGAGATGCACATGGTAGACACCGT...GTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GAAGAGGTAGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGTGCGCCCCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: EEVGAHASGQHKAQQGQCAPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGGGC...GCACTGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCTACCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACTCCGGGCCACCTTCTaGAGCCACCGGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLLRATF*SHRQLS
Trigger: ACTGAGCTGCCGGTGGCTGCAGAAGGTGGCCCGGAG...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCCCAAGCGATGCTGGTaGGAACAGTCTGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKPKRCW*EQSGGH
Trigger: GTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTCCCAGGCCCAAGCGATaGTGGTGCGAACAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVPRPKR*WCEQSG
Trigger: GCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGG...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCTTGTGGACAGTGTATaGCATGCCGTAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PYPPRPGPGRSPETLPSWLVDSV*HAVALL
Trigger: GAGCAGGGCTACGGCATGGCATACACTGTCCACAAG...CCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp TGCTGGTGCGAACAGTCTGGCGGGCACCGCTTTGACAAGACACAGGCACTGAGGGCAGGAAAGAAGCCGTaGTCCTGGGGACCGAGGACG +
Preference number: 4 (lower is better)
Translates to: CWCEQSGGHRFDKTQALRAGKKP*SWGPRT
Trigger: CGTCCTCGGTCCCCAGGACCACGGCTTCTTTCCTGC...CCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCAGCAGACCCCCACGGATaGATGGCCAGATGGATAGAT +
Preference number: 4 (lower is better)
Translates to: APYPPRPGPGRSPETLPSADPHG*MARWID
Trigger: ATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGC...TGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGGTCAAGGCCCTGCTaGGCAGTAGGCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPWSRPC*AVGRRQ
Trigger: CTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCA...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AAGGAGGCGGTCACCGTTGAGGGGGATGAAGTACGGGAAGAGGTAGGGGCCCACTGGTCAAGGCCCTGCTaGGCAGTAGGCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: KEAVTVEGDEVREEVGAHWSRPC*AVGRRQ
Trigger: CTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCA...GTGGGCCCCTACCTCTTCCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp CCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATGGTCAAGGCCCTGCTaGGCAGTAGGCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PRPGPGRSPETLPSWPQSWSRPC*AVGRRQ
Trigger: CTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCA...TGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGRSSQI*SRPCWA
Trigger: TGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCT...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPRSSQI*SRPCWA
Trigger: TGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPGRRGR*QGAARS
Trigger: AGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGCCCATGAACTCCACTaGCGAGGGCACCGTACCCAC +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKAHELH*RGHRTH
Trigger: GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGAGGGGCCCACGCAAGTaGACAGCACAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGRGPRK*TAQGTA
Trigger: TGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp CACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATAGGGGCCCACGCAAGTaGACAGCACAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: HLAPVQVEAQRHCLHGHNRGPRK*TAQGTA
Trigger: TGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT...ATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCCGCCAACGTGGCCGTaGCCTCGGAAAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKPPTWP*PRKESP
Trigger: TGGGCTTTCTTTCCGAGGCCACGGCCACGTTGGCGG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GTGATCCTTCTCCTCGGTAAAGCCAGCCCCCGCCAACGTGGCCGTGGCCTCGGACAGCTCCACATTCAGTaGCTTGGACACCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: VILLLGKASPRQRGRGLGQLHIQ*LGHRQV
Trigger: GACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTG...TCCGAGGCCACGGCCACGTTGGCGGGGGCTGGCTTTACCGAGGAGAAGGATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGGCCCAAGCGATGCTaGTGCGAACAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVRPKRC*CEQSGG
Trigger: CCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCT...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCAAGGCCAGGTGGAAGATaGCCAGAGCTCCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: APYPPRPGPGRSPETLPSRPGGR*PELQRA
Trigger: TGCTCTTTGGAGCTCTGGCCATCTTCCACCTGGCCT...TGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAGTGCCTTGTGGTGGGGTaGGGATTGACAGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: VAHELHWRGHRTHLAPVQCLVVG*GLTGMK
Trigger: TTTCATGCCTGTCAATCCCCACCCCACCACAAGGCA...CTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGGGAGCGGGTGTCCGTaGGGCAGACCTCGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVGSGCP*GRPRLK
Trigger: CTTTAAGCGAGGTCTGCCCCACGGACACCCGCTCCC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGTAGAGGCACGGTACTaGAGGACTGGGGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPVEARY*RTGGRR
Trigger: ACGCCTTCCCCCAGTCCTCCAGTACCGTGCCTCTAC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR TCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGAAGTGGTAGAGGCTaGAGAACCCGCCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVRSGRG*RTRLPR
Trigger: CCGTGGCAGGCGGGTTCTTCAGCCTCTACCACTTCT...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR TCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPSRGSP*TPLARA
Trigger: TGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR TCA 90 bp GGTGCCCACGAAGTAGAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GAHEVEVAHELHWRGHRTSRGSP*TPLARA
Trigger: TGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACT...GGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACGCTGGCTGCATAGGTaGCCAGCACAGCCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLRWLHR*PAQPRR
Trigger: CCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCG...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AAGAGCAAGTTTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAACAGCGCTGGCTGCATAGGTaGCCAGCACAGCCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KSKFKARTPRPKRCWCEQRWLHR*PAQPRR
Trigger: CCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCG...CTGTTCGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAAACTTGCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGACAAGACACAGGCACTaGGGATCCGAGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKTRHRH*GSEPGA
Trigger: AGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGT...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGTGGCGGGCACCGCTTTaGCAAGACACAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKWRAPL*QDTGTE
Trigger: CTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCA...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGGCCCAGCTGAGCTCTaGCCACTTGTGGACAGTGTA +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPGPAEL*PLVDSV
Trigger: TACACTGTCCACAAGTGGTCAGAGCTCAGCTGGGCC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AGGGACAGCAGGACCGCAGCCAGGTGGAAACTGAAGCCATGTAGGAGGGCGCTGTCCAGCATCCAAAAGTaGCCCAGTGACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RDSRTAARWKLKPCRRALSSIQK*PSDWPS
Trigger: GCTGGGCCAGTCACTGGGTCACTTTTGGATGCTGGA...CAGCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCTGCTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPIWSRP*WAVGRR
Trigger: TCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGAT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGGCCTGCCACGGTGCTTaGATGCTTCAGGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGACHGA*MLQVGW
Trigger: CCATCCTACCTGAAGCATGCAAGCACCGTGGCAGGC...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACCCGCCTGCCACGGTaGTTGCATGCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVTRLPR*LHASGR
Trigger: CCTACCTGAAGCATGCAAGCACCGTGGCAGGCGGGT...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGGCCCCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGAPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGGGC...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGCCCCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPAPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGGGC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp GTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATCTCCGGGCCACCTTCTaGAGCCACCGGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VEAQRHCLHGHNHLCPSHLRATF*SHRQLS
Trigger: ACTGAGCTGCCGGTGGCTGCAGAAGGTGGCCCGGAG...ATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACCCAGGCCCAAGCGATaGTGGTGCGAACAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLPRPKR*WCEQSG
Trigger: GCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGG...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp TTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAACAGTCTGGCGGGCACGGTGTCTACCATGTaGATCTCACGAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRLAPPGPSDAGANSLAGTVSTM*ISRASR
Trigger: TCTGGAGGCTCGTGAGATGCACATGGTAGACACCGT...GCCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472520.5
CDS-3UTR GCA 90 bp CGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCATTTCAGTTTGGGGCTaGCCAGCCCATGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RTHLAPVQVEAQRHCLHGISVWG*PAHVEA
Trigger: TGCCTCTACATGGGCTGGGCAGCCCCAAACTGAAAT...GCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGCAGGAAAGAAGCCGTaGTCCTGGGGACCGAGGACG +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLAGKKP*SWGPRT
Trigger: CGTCCTCGGTCCCCAGGACCACGGCTTCTTTCCTGC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAGCCTTGCAGTAGCTGCTaGAAAAATTCCTGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: VAHELHWRGHRTHLAPVQPCSSC*KNSWRL
Trigger: TAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGG...CTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTTGGTCAAGGCCCTGCTaGGCAGTAGGCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVWSRPC*AVGRRQ
Trigger: CTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCA...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp TCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGGTCAAGGCCCTGCTaGGCAGTAGGCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SPRSRSKPRDTAFMATIIWSRPC*AVGRRQ
Trigger: CTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCA...GATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKGRRGR*QGAARS
Trigger: AGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp TCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SPRSRSKPRDTAFMATIIGRRGR*QGAARS
Trigger: AGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCC...GATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAGGAAGACGCCTCGATaGGAGGAATGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPRKTPR*EECRQR
Trigger: CCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCCT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GGTGCCCACGAAGTAGAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCAGGAAGACGCCTCGATaGGAGGAATGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GAHEVEVAHELHWRGHRTRKTPR*EECRQR
Trigger: CCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCCT...GGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp CGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCGAGACACTGCCTTCATaGCCACAATCATCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: RTHLAPVQVEAQRHCLHGETLPS*PQSSVP
Trigger: GGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTC...GCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAGGGCCCGAAGACGATaGTGCCCACGAAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPRARRR*CPRSRG
Trigger: ACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGAGGGCCCGAAGACGATaGTGCCCACGAAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGRARRR*CPRSRG
Trigger: ACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCT...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGGCCCACGCAAGTaGACAGCACAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKRGPRK*TAQGTA
Trigger: TGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGGGGCCCACGCAAGTaGACAGCACAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVRGPRK*TAQGTA
Trigger: TGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACCGCCAACGTGGCCGTaGCCTCGGAAAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLPPTWP*PRKESP
Trigger: TGGGCTTTCTTTCCGAGGCCACGGCCACGTTGGCGG...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCCAGCCCCCGCCAACGTaGCCGTGGCCTCGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAQPPPT*PWPRKE
Trigger: TTCTTTCCGAGGCCACGGCCACGTTGGCGGGGGCTG...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp TCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCAGCCCCCGCCAACGTaGCCGTGGCCTCGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SRSKPRDTAFMATIICAPQPPPT*PWPRKE
Trigger: TTCTTTCCGAGGCCACGGCCACGTTGGCGGGGGCTG...AGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp CCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACATTCAGTGGCTTaGACACCGTCAGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: PYPPRPGPGRSPETLPSWPHSVA*TPSGPI
Trigger: AATGGGACCTGACGGTGTCCAAGCCACTGAATGTGG...CCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GCTGAAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACTTGCGAAGGAGAGGCCCAAGCGATGCTaGTGCGAACAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: AEVEGDSTLVGSQPLAKERPKRC*CEQSGG
Trigger: CCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCT...CTCCTTCGCAAGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCCTCATCCCCCATCAGTaGCACCCTGAGAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPLIPHQ*HPERGL
Trigger: AAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAG...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGAAGGCGGGGAGGCCCTaGATCTCCCCTTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGKAGRP*ISPSLF
Trigger: AAACAGAGAAGGGGAGATCCAGGGCCTCCCCGCCTT...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAAGGCGGGGAGGCCCTaGATCTCCCCTTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPKAGRP*ISPSLF
Trigger: AAACAGAGAAGGGGAGATCCAGGGCCTCCCCGCCTT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAAGAAGTGGTAGAGGCTaGAGAACCCGCCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLRSGRG*RTRLPR
Trigger: CCGTGGCAGGCGGGTTCTTCAGCCTCTACCACTTCT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR TCA 90 bp TCCTTCTCCTCGGTAAAGCCAGCCCCCGCCAACGTGGCCGTGGCCTCGGAAAGAGACAACTTCCACCATTaGCCGAGGCAGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: SFSSVKPAPANVAVASERDNFHH*PRQLHI
Trigger: AATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTC...TCTTTCCGAGGCCACGGCCACGTTGGCGGGGGCTGGCTTTACCGAGGAGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACAGCCAGGTGGAAACTaGAGCCATGTAGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLQPGGN*SHVGGR
Trigger: GCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTG...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAACAAGACACAGGCACTaGGGATCCGAGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLTRHRH*GSEPGA
Trigger: AGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCACAAGACACAGGCACTaGGGATCCGAGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: VQVEAQRHCLHGHNHLCPTRHRH*GSEPGA
Trigger: AGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGT...GGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGGCGGGCACCGCTTTaGCAAGACACAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLWRAPL*QDTGTE
Trigger: CTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCA...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGGCCCAGCTGAGCTCTaGCCACTTGTGGACAGTGTA +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKGPAEL*PLVDSV
Trigger: TACACTGTCCACAAGTGGTCAGAGCTCAGCTGGGCC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTTCCAGCATCCAAAAGTaGCCCAGTGACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVSSIQK*PSDWPS
Trigger: GCTGGGCCAGTCACTGGGTCACTTTTGGATGCTGGA...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAAGAGGTAGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGTGCATGTGCCTCAGCCTATaGGACGGTAGAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: EEVGAHASGQHKAQQGQCMCLSL*DGRRSS
Trigger: GCTGGATCTTCTACCGTCTCATAGGCTGAGGCACAT...GCACTGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCTACCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKIWSRP*WAVGRR
Trigger: TCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGAT...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAACCCGCCTGCCACGGTaGTTGCATGCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLTRLPR*LHASGR
Trigger: CCTACCTGAAGCATGCAAGCACCGTGGCAGGCGGGT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGCTGAAGAACCCGCCTaGCACGGTGCTTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVAEEPA*HGACML
Trigger: AAGCATGCAAGCACCGTGGCAGGCGGGTTCTTCAGC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGCTGAAGAACCCGCCTaGCACGGTGCTTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKAEEPA*HGACML
Trigger: AAGCATGCAAGCACCGTGGCAGGCGGGTTCTTCAGC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp CCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGGAAGCCCAGAGACACTaGCTTCATGGCCACAATCAT +
Preference number: 4 (lower is better)
Translates to: PYPPRPGPGRSPETLPSWEAQRH*LHGHNH
Trigger: ATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTC...CCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGCCCGAAGACGATGGTaGCCACGAAGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKARRRW*PRSRGS
Trigger: GCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp CACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCTTCTCCTCCTCCGGGCCACCTTCTaGAGCCACCGGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: HIQWLGHRQVPFQVILLLLRATF*SHRQLS
Trigger: ACTGAGCTGCCGGTGGCTGCAGAAGGTGGCCCGGAG...GAGGAGAAGGATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCACAGCAGGGCCAGTaGCAGGCTCCGGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCAQQGQ*QAPGHL
Trigger: AAGGTGGCCCGGAGCCTGGCACTGGCCCTGCTGTGC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp CCATGCCGTAGCCCTGCTCCTCTGTGGTGTCATCCACATCGACATCAAACAGGGCCCAAGCGATGCTGGTaGGAACAGTCTGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PCRSPAPLWCHPHRHQTGPKRCW*EQSGGH
Trigger: GTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGG...CCCTGTTTGATGTCGATGTGGATGACACCACAGAGGAGCAGGGCTACGGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCCCCAGGCCCAAGCGATaGTGGTGCGAACAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAPRPKR*WCEQSG
Trigger: GCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGG...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTCCCAGGCCCAAGCGATaGTGGTGCGAACAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLWCHPHRHQTGSPGRPGPRPKR*WCEQSG
Trigger: GCCAGACTGTTCGCACCAGCATCGCTTGGGCCTGGG...ACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGGACAGTGTATGCCATaGCGTAGCCCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVGQCMP*RSPAPL
Trigger: CAGAGGAGCAGGGCTACGGCATGGCATACACTGTCC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGGACAGTGTATGCCATaGCGTAGCCCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKGQCMP*RSPAPL
Trigger: CAGAGGAGCAGGGCTACGGCATGGCATACACTGTCC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCCTTGTGGACAGTGTATaGCATGCCGTAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPLVDSV*HAVALL
Trigger: GAGCAGGGCTACGGCATGGCATACACTGTCCACAAG...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp ACTGGCGAGGGCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACCTCGCTTAAAGGATaGACTCTGGCACTCACATTT +
Preference number: 4 (lower is better)
Translates to: TGEGTVPTSPRSRSKPRDTSLKG*TLALTF
Trigger: AAATGTGAGTGCCAGAGTGCATCCTTTAAGCGAGGT...GTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGCCCTCGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGCAGGAAAGAAGCCGTaGTCCTGGGGACCGAGGACG +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAAGKKP*SWGPRT
Trigger: CGTCCTCGGTCCCCAGGACCACGGCTTCTTTCCTGC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AAGGAGGCGGTCACCGTTGAGGGGGATGAAGTACGGGAAGAGGTAGGGGCCCACGCAGACCCCCACGGATaGATGGCCAGATGGATAGAT +
Preference number: 4 (lower is better)
Translates to: KEAVTVEGDEVREEVGAHADPHG*MARWID
Trigger: ATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGC...GTGGGCCCCTACCTCTTCCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VQVEAQRHCLHGHNHLCPRSSQI*SRPCWA
Trigger: TGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCT...GGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCATGCTTCAGGTAGGATaGCAACCCGAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPMLQVG*QPEPPE
Trigger: CTCTGGAGGCTCGGGTTGCCATCCTACCTGAAGCAT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR CCA 90 bp GACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCCCACCGGCAGCTCAGTaGGCGGCCTTGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: DTAFMATIICAPRILCHVPPAAQ*AALDSL
Trigger: CAAGCTGTCCAAGGCCGCCCACTGAGCTGCCGGTGG...GACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AGGCAGCTCCACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCCGCCAACGTGGCCGTaGCCTCGGAAAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RQLHIQWLGHRQVPFQVIPPTWP*PRKESP
Trigger: TGGGCTTTCTTTCCGAGGCCACGGCCACGTTGGCGG...GATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCCAGCTCCACATTCAGTaGCTTGGACACCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPQLHIQ*LGHRQV
Trigger: GACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTG...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAGGACCGCAGCCAGGTaGAAACTGAAGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPRTAAR*KLKPCR
Trigger: CCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AAGGAGGCGGTCACCGTTGAGGGGGATGAAGTACGGGAAGAGGTAGGGGCCCACAGGACCGCAGCCAGGTaGAAACTGAAGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: KEAVTVEGDEVREEVGAHRTAAR*KLKPCR
Trigger: CCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCT...GTGGGCCCCTACCTCTTCCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGAGGCCAGGTGGAAGATaGCCAGAGCTCCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGRPGGR*PELQRA
Trigger: TGCTCTTTGGAGCTCTGGCCATCTTCCACCTGGCCT...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAGGCCAGGTGGAAGATaGCCAGAGCTCCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPRPGGR*PELQRA
Trigger: TGCTCTTTGGAGCTCTGGCCATCTTCCACCTGGCCT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGAGGTAGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGTGCCAAGCTCTGACCACTTGTaGACAGTGTATGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: RGRGPRKWTAQGTAGPVPSSDHL*TVYAMP
Trigger: CGGCATGGCATACACTGTCCACAAGTGGTCAGAGCT...TGGCACTGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCTACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCTCATCCCCCATCAGTaGCACCCTGAGAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKLIPHQ*HPERGL
Trigger: AAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGGTTGGGGGTCAAGGATaGAGGGGGTCAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGVGGQG*RGSRSR
Trigger: TCTACTCCTTGACCCCCTCCATCCTTGACCCCCAAC...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGTTGGGGGTCAAGGATaGAGGGGGTCAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPVGGQG*RGSRSR
Trigger: TCTACTCCTTGACCCCCTCCATCCTTGACCCCCAAC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCACTCACATTTCAGTTTaGGGCTGCCCAGCCCATGTA +
Preference number: 4 (lower is better)
Translates to: RTHLAPVQVEAQRHCLHGTHISV*GCPAHV
Trigger: TACATGGGCTGGGCAGCCCCAAACTGAAATGTGAGT...GCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS-3UTR CCA 90 bp GTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATGGGAGCGGGTGTCCGTaGGGCAGACCTCGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: VEAQRHCLHGHNHLCPSHGSGCP*GRPRLK
Trigger: CTTTAAGCGAGGTCTGCCCCACGGACACCCGCTCCC...ATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCGGATGGATGGCCAGATaGATAGATCTGTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GTVPTSPRSRSKPRDTAFGWMAR*IDLSKQ
Trigger: CTGCTTTGACAGATCTATCCATCTGGCCATCCATCC...GAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCAGAAGTGGTAGAGGCTaGAGAACCCGCCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCARSGRG*RTRLPR
Trigger: CCGTGGCAGGCGGGTTCTTCAGCCTCTACCACTTCT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGGTAGCACAGGAGGCTaGGCAGCACGACCCAAACCA +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAGSTGG*AARPKP
Trigger: TGGTTTGGGTCGTGCTGCTCAGCCTCCTGTGCTACC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR TCA 90 bp GCCCACGAAGTAGAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACGACAACTTCCACCATTaGCCGAGGCAGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: AHEVEVAHELHWRGHRTHDNFHH*PRQLHI
Trigger: AATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTC...GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACC +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGAGSSL*QLPPLT
Trigger: GGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGC...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GACATGGGCAGGTTCCAGCTTGTGACAACTTCCACCATTGACCGAGGCAGCTCCTGGCGGGCACCGCTTTaGCAAGACACAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: DMGRFQLVTTSTIDRGSSWRAPL*QDTGTE
Trigger: CTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCA...GGAGCTGCCTCGGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGCCCATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCATGTGCCTCAGCCTATaGGACGGTAGAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPMCLSL*DGRRSS
Trigger: GCTGGATCTTCTACCGTCTCATAGGCTGAGGCACAT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GACATGCTCCACGTAAGTGATAAAAGCCAGGGACAGCAGGACCGCAGCCAGGTGCACACGCACAGCCTGTaGCCTGGCAGGAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: DMLHVSDKSQGQQDRSQVHTHSL*PGRKEA
Trigger: GGCTTCTTTCCTGCCAGGTCACAGGCTGTGCGTGTG...CACCTGGCTGCGGTCCTGCTGTCCCTGGCTTTTATCACTTACGTGGAGCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGCTAAAGGTGGCCATTaGAGACCCCCACGGATGGAT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKAKGGH*RPPRMD
Trigger: ATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCCAGCCTTGCAGTAGCTaGTGGAAAAATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPQPCSS*WKNSWR
Trigger: CCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTG...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGCTGAAGAACCCGCCTaGCACGGTGCTTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLAEEPA*HGACML
Trigger: AAGCATGCAAGCACCGTGGCAGGCGGGTTCTTCAGC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGCCCCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLAPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGGGC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp CCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCGCCCCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: PVQVEAQRHCLHGHNHLCAPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGGGC...GCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGCCCGAAGACGATGGTaGCCACGAAGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLARRRW*PRSRGS
Trigger: GCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp GCTGAAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACTTGCGAAGGAGGGACAGTGTATGCCATaGCGTAGCCCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AEVEGDSTLVGSQPLAKEGQCMP*RSPAPL
Trigger: CAGAGGAGCAGGGCTACGGCATGGCATACACTGTCC...CTCCTTCGCAAGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCTTGTGGACAGTGTATaGCATGCCGTAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKLVDSV*HAVALL
Trigger: GAGCAGGGCTACGGCATGGCATACACTGTCCACAAG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTCTTGTGGACAGTGTATaGCATGCCGTAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVLVDSV*HAVALL
Trigger: GAGCAGGGCTACGGCATGGCATACACTGTCCACAAG...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGCAGACCCCCACGGATaGATGGCCAGATGGATAGAT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKADPHG*MARWID
Trigger: ATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCTGGTCAAGGCCCTGCTaGGCAGTAGGCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAWSRPC*AVGRRQ
Trigger: CTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCA...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGCAGCTCCACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: RQLHIQWLGHRQVPFQVIGRRGR*QGAARS
Trigger: AGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCC...GATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGAGGAAGACGCCTCGATaGGAGGAATGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QVEAQRHCLHGHNHLCPSRKTPR*EECRQR
Trigger: CCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCCT...CGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCGCCCATGAACTCCACTaGCGAGGGCACCGTACCCAC +
Preference number: 4 (lower is better)
Translates to: DTAFMATIICAPRILCHVAHELH*RGHRTH
Trigger: GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGC...GACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAAGGGCCCGAAGACGATaGTGCCCACGAAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLRARRR*CPRSRG
Trigger: ACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTCCACCGGCAGCTCAGTaGGCGGCCTTGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCPPAAQ*AALDSL
Trigger: CAAGCTGTCCAAGGCCGCCCACTGAGCTGCCGGTGG...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCCCACATTCAGTGGCTTaGACACCGTCAGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPPHSVA*TPSGPI
Trigger: AATGGGACCTGACGGTGTCCAAGCCACTGAATGTGG...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTCAGCTCCACATTCAGTaGCTTGGACACCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVQLHIQ*LGHRQV
Trigger: GACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTG...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGGACCGCAGCCAGGTaGAAACTGAAGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVRTAAR*KLKPCR
Trigger: CCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCT...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CTCCACGTAAGTGATAAAAGCCAGGGACAGCAGGACCGCAGCCAGGTGGAAACTAGGCCCAAGCGATGCTaGTGCGAACAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LHVSDKSQGQQDRSQVETRPKRC*CEQSGG
Trigger: CCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCT...AGTTTCCACCTGGCTGCGGTCCTGCTGTCCCTGGCTTTTATCACTTACGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGGCCAGGTGGAAGATaGCCAGAGCTCCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVRPGGR*PELQRA
Trigger: TGCTCTTTGGAGCTCTGGCCATCTTCCACCTGGCCT...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CTCCAAAGAGCAAGTTTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGAGGCCAGGTGGAAGATaGCCAGAGCTCCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LQRASLRLAPPGPSDAGARPGGR*PELQRA
Trigger: TGCTCTTTGGAGCTCTGGCCATCTTCCACCTGGCCT...CGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAAACTTGCTCTTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCAGCCCTGCTCCTCTGTaGTGTCATCCACATCGACAT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPSPAPL*CHPHRH
Trigger: ATGTCGATGTGGATGACACCACAGAGGAGCAGGGCT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACCTCGCATCTTGTGCCTCATCCCCCATCAGTaGCACCCTGAGAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: EVEGDSTLVGSQPPRILCLIPHQ*HPERGL
Trigger: AAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAG...GCACAAGATGCGAGGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472520.5
CDS-3UTR CCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGTTGGGGGTCAAGGATaGAGGGGGTCAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVVGGQG*RGSRSR
Trigger: TCTACTCCTTGACCCCCTCCATCCTTGACCCCCAAC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CTCCAAAGAGCAAGTTTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGGTTGGGGGTCAAGGATaGAGGGGGTCAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LQRASLRLAPPGPSDAGAVGGQG*RGSRSR
Trigger: TCTACTCCTTGACCCCCTCCATCCTTGACCCCCAAC...CGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAAACTTGCTCTTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTTGGGGGTCAAGGATaGAGGGGGTCAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: RPGPGRSPETLPSWPQSSVGGQG*RGSRSR
Trigger: TCTACTCCTTGACCCCCTCCATCCTTGACCCCCAAC...AGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGCCTTGTGGTGGGGTaGGGATTGACAGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPCLVVG*GLTGMK
Trigger: TTTCATGCCTGTCAATCCCCACCCCACCACAAGGCA...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAAACTCACATTTCAGTTTaGGGCTGCCCAGCCCATGTA +
Preference number: 4 (lower is better)
Translates to: PPRPGPGRSPETLPSWPQTHISV*GCPAHV
Trigger: TACATGGGCTGGGCAGCCCCAAACTGAAATGTGAGT...TTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS-3UTR CCA 90 bp GTAGAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACCTCGCCCCGGGATGGATGGCCAGATaGATAGATCTGTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VEVAHELHWRGHRTHLAPGWMAR*IDLSKQ
Trigger: CTGCTTTGACAGATCTATCCATCTGGCCATCCATCC...CGGGGCGAGGTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCASRGSP*TPLARA
Trigger: TGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR TCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGGTCCCATTCCAGGTaGTCCTTCTCCTCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVRSHSR*SFSSVK
Trigger: CTTTACCGAGGAGAAGGATCACCTGGAATGGGACCT...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTAGGTCCCATTCCAGGTaGTCCTTCTCCTCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RPGPGRSPETLPSWPQSSRSHSR*SFSSVK
Trigger: CTTTACCGAGGAGAAGGATCACCTGGAATGGGACCT...AGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR TCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGACAACTTCCACCATTaGCCGAGGCAGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVDNFHH*PRQLHI
Trigger: AATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACC +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVAGSSL*QLPPLT
Trigger: GGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACC +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKAGSSL*QLPPLT
Trigger: GGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCTTCTCCTCCAGCCAGGTGGAAACTaGAGCCATGTAGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: HIQWLGHRQVPFQVILLLQPGGN*SHVGGR
Trigger: GCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTG...GAGGAGAAGGATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTGGCCCAGCTGAGCTCTaGCCACTTGTGGACAGTGTA +
Preference number: 4 (lower is better)
Translates to: PLWCHPHRHQTGSPGRPGGPAEL*PLVDSV
Trigger: TACACTGTCCACAAGTGGTCAGAGCTCAGCTGGGCC...ACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCTCCAGCATCCAAAAGTaGCCCAGTGACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCASSIQK*PSDWPS
Trigger: GCTGGGCCAGTCACTGGGTCACTTTTGGATGCTGGA...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATTCCAGCATCCAAAAGTaGCCCAGTGACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VEAQRHCLHGHNHLCPSHSSIQK*PSDWPS
Trigger: GCTGGGCCAGTCACTGGGTCACTTTTGGATGCTGGA...ATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR TCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGTCTTAAGAGGGTTATaGGGGTCCACAGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPVLRGL*GSTDVP
Trigger: AGGCACATCTGTGGACCCTCATAACCCTCTTAAGAC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AGGGGCCCACGCAAGTGGACAGCACAAGGCACAGCAGGGCCAGTGCCAGGCTCCGGCATGAAAATGGTGTaGTTTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RGPRKWTAQGTAGPVPGSGMKMV*FCVCVC
Trigger: ACACACACACACACAAAATCACACCATTTTCATGCC...GGAGCCTGGCACTGGCCCTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGCTAAAGGTGGCCATTaGAGACCCCCACGGATGGAT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLAKGGH*RPPRMD
Trigger: ATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTCAGCCTTGCAGTAGCTaGTGGAAAAATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVQPCSS*WKNSWR
Trigger: CCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTG...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCAGCCTTGCAGTAGCTaGTGGAAAAATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKQPCSS*WKNSWR
Trigger: CCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGGRRQP*SSCWKN
Trigger: ATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCC...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GCCCACGAAGTAGAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCCACGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: AHEVEVAHELHWRGHRTHGRRQP*SSCWKN
Trigger: ATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCC...GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAIWSRP*WAVGRR
Trigger: TCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGAT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CCATGCCGTAGCCCTGCTCCTCTGTGGTGTCATCCACATCGACATCAAACAGGGATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PCRSPAPLWCHPHRHQTGIWSRP*WAVGRR
Trigger: TCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGAT...CCCTGTTTGATGTCGATGTGGATGACACCACAGAGGAGCAGGGCTACGGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGCCTGCCACGGTGCTTaGATGCTTCAGGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAACHGA*MLQVGW
Trigger: CCATCCTACCTGAAGCATGCAAGCACCGTGGCAGGC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGACGGTGTCTACCATGTaGATCTCACCCATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGTVSTM*ISPMSR
Trigger: CCTACTCATGGGTGAGATGCACATGGTAGACACCGT...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGAAGCCCAGAGACACTaGCTTCATGGCCACAATCAT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPEAQRH*LHGHNH
Trigger: ATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp GGTGCCCACGAAGTAGAGGTAGCCCATGAACTCCACTGGCGAGGGCACCGTACCGAAGCCCAGAGACACTaGCTTCATGGCCACAATCAT +
Preference number: 4 (lower is better)
Translates to: GAHEVEVAHELHWRGHRTEAQRH*LHGHNH
Trigger: ATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTC...GGTACGGTGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACTTCGTGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp CACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATGAAGCCCAGAGACACTaGCTTCATGGCCACAATCAT +
Preference number: 4 (lower is better)
Translates to: HLAPVQVEAQRHCLHGHNEAQRH*LHGHNH
Trigger: ATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTC...ATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGCCCGAAGACGATGGTaGCCACGAAGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAARRRW*PRSRGS
Trigger: GCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTCCCAAGCGATGCTGGTaGGAACAGTCTGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCPKRCW*EQSGGH
Trigger: GTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGG...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCTTACCATGGTGCCCTTaGGAAGGAGGCGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCALPWCP*EGGGHR
Trigger: ACGGTGACCGCCTCCTTCGCAAGGGCACCATGGTAA...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359882.8
CDS-3UTR GCA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATTGTGGGTGTTCGGCATaGACACGCACAGCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHCGCSA*TRTACD
Trigger: GTCACAGGCTGTGCGTGTGCATGCCGAACACCCACA...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGCAGACCCCCACGGATaGATGGCCAGATGGATAGAT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLADPHG*MARWID
Trigger: ATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGCCTTGCAGTAGCTGCTaGAAAAATTCCTGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGPCSSC*KNSWRL
Trigger: TAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGG...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AAGGAGGCGGTCACCGTTGAGGGGGATGAAGTACGGGAAGAGGTAGGGGCCCACCCTTGCAGTAGCTGCTaGAAAAATTCCTGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: KEAVTVEGDEVREEVGAHPCSSC*KNSWRL
Trigger: TAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGG...GTGGGCCCCTACCTCTTCCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCAGGAAGACGCCTCGATaGGAGGAATGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCARKTPR*EECRQR
Trigger: CCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCCT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp GTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATAGGGCCCGAAGACGATaGTGCCCACGAAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: VEAQRHCLHGHNHLCPSHRARRR*CPRSRG
Trigger: ACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCT...ATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGCCACATTCAGTGGCTTaGACACCGTCAGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKPHSVA*TPSGPI
Trigger: AATGGGACCTGACGGTGTCCAAGCCACTGAATGTGG...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACAGCTCCACATTCAGTaGCTTGGACACCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLQLHIQ*LGHRQV
Trigger: GACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTG...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGGCCCAAGCGATGCTaGTGCGAACAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCRPKRC*CEQSGG
Trigger: CCCGCCAGACTGTTCGCACCAGCATCGCTTGGGCCT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAAGGCCAGGTGGAAGATaGCCAGAGCTCCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLRPGGR*PELQRA
Trigger: TGCTCTTTGGAGCTCTGGCCATCTTCCACCTGGCCT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATGCACAGCCTGTGACCTaGCAGGAAAGAAGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: VEAQRHCLHGHNHLCPSHAQPVT*QERSRG
Trigger: ACCACGGCTTCTTTCCTGCCAGGTCACAGGCTGTGC...ATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR TCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGAAGTGGTAGAGGCTaGAGAACCCGCCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCRSGRG*RTRLPR
Trigger: CCGTGGCAGGCGGGTTCTTCAGCCTCTACCACTTCT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR TCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPPQNSC*SGRRQH
Trigger: GTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGG...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAAGGTCCCATTCCAGGTaGTCCTTCTCCTCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLRSHSR*SFSSVK
Trigger: CTTTACCGAGGAGAAGGATCACCTGGAATGGGACCT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGACAACTTCCACCATTaGCCGAGGCAGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLDNFHH*PRQLHI
Trigger: AATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGGGCGGAGAGCATTCTTaGAAACATAGTTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: PYPPRPGPGRSPETLPSWGGEHS*KHSYLA
Trigger: GGCTAAATAACTATGTTTTCAAGAATGCTCTCCGCC...CCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR TCA 90 bp TGTGCCTCAGCCTATGAGACGGTAGAAGATCCAGCATCCAAAAGTGACCCAGTGCGCTGGCTGCATAGGTaGCCAGCACAGCCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CASAYETVEDPASKSDPVRWLHR*PAQPRR
Trigger: CCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCG...CACTGGGTCACTTTTGGATGCTGGATCTTCTACCGTCTCATAGGCTGAGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTCAGCCAGGTGGAAACTaGAGCCATGTAGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCQPGGN*SHVGGR
Trigger: GCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTG...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAATGTGCCTCAGCCTATaGGACGGTAGAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLMCLSL*DGRRSS
Trigger: GCTGGATCTTCTACCGTCTCATAGGCTGAGGCACAT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGTCTTAAGAGGGTTATaGGGGTCCACAGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKVLRGL*GSTDVP
Trigger: AGGCACATCTGTGGACCCTCATAACCCTCTTAAGAC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp TGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCTTCTCCTCGGTAAAGCCGACTGGGGGAAGGCGTaGGAAGTCAGGTACATCAGA +
Preference number: 4 (lower is better)
Translates to: WLGHRQVPFQVILLLGKADWGKA*EVRYIR
Trigger: TCTGATGTACCTGACTTCTCACGCCTTCCCCCAGTC...GGCTTTACCGAGGAGAAGGATCACCTGGAATGGGACCTGACGGTGTCCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATGCTAAAGGTGGCCATTaGAGACCCCCACGGATGGAT +
Preference number: 4 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHAKGGH*RPPRMD
Trigger: ATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGC...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKGRRQP*SSCWKN
Trigger: ATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTACCCGCCTGCCACGGTaGTTGCATGCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCTRLPR*LHASGR
Trigger: CCTACCTGAAGCATGCAAGCACCGTGGCAGGCGGGT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGACGGTGTCTACCATGTaGATCTCACCCATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKTVSTM*ISPMSR
Trigger: CCTACTCATGGGTGAGATGCACATGGTAGACACCGT...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGAAGCCCAGAGACACTaGCTTCATGGCCACAATCAT +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVEAQRH*LHGHNH
Trigger: ATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp CTCCACGTAAGTGATAAAAGCCAGGGACAGCAGGACCGCAGCCAGGTGGAAACTGGACAGTGTATGCCATaGCGTAGCCCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LHVSDKSQGQQDRSQVETGQCMP*RSPAPL
Trigger: CAGAGGAGCAGGGCTACGGCATGGCATACACTGTCC...AGTTTCCACCTGGCTGCGGTCCTGCTGTCCCTGGCTTTTATCACTTACGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AGGCAGCTCCACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCTTGTGGACAGTGTATaGCATGCCGTAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RQLHIQWLGHRQVPFQVILVDSV*HAVALL
Trigger: GAGCAGGGCTACGGCATGGCATACACTGTCCACAAG...GATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AATCATCTGTGCCCCTCGCATCTTGTGCCATGTCACGGTGTCTACCATGTGCATAGGCTCGCAGCCACTTaGGAAGGAGGCGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: NHLCPSHLVPCHGVYHVHRLAAT*EGGGHR
Trigger: ACGGTGACCGCCTCCTTCGCAAGTGGCTGCGAGCCT...ATGCACATGGTAGACACCGTGACATGGCACAAGATGCGAGGGGCACAGATGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCACCTTACCATGGTaGCCTTGCGAAGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCATLPW*PCEGGG
Trigger: ACCGCCTCCTTCGCAAGGGCACCATGGTAAGGTGGC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359882.8
CDS-3UTR GCA 90 bp CCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTGAGCCACCAACTGTGTaGATGTGGGTGTTCGGCATG +
Preference number: 4 (lower is better)
Translates to: PLWCHPHRHQTGSPGRPGEPPTV*MWVFGM
Trigger: CATGCCGAACACCCACATGCACACAGTTGGTGGCTC...ACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATGCAGACCCCCACGGATaGATGGCCAGATGGATAGAT +
Preference number: 4 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHADPHG*MARWID
Trigger: ATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGC...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGCTGGAAAAATTCCTaGCGGCTAAAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPCWKNS*RLKVAI
Trigger: AATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCA...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CTTGTGACAACTTCCACCATTGACCGAGGCAGCTCCACATTCAGTGGCTTGGACTGGTCAAGGCCCTGCTaGGCAGTAGGCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LVTTSTIDRGSSTFSGLDWSRPC*AVGRRQ
Trigger: CTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCA...GTCCAAGCCACTGAATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCRSSQI*SRPCWA
Trigger: TGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCATGCTTCAGGTAGGATaGCAACCCGAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAMLQVG*QPEPPE
Trigger: CTCTGGAGGCTCGGGTTGCCATCCTACCTGAAGCAT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR CCA 90 bp TGTGCCTCAGCCTATGAGACGGTAGAAGATCCAGCATCCAAAAGTGACCCAGTGCCGCCAACGTGGCCGTaGCCTCGGAAAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: CASAYETVEDPASKSDPVPPTWP*PRKESP
Trigger: TGGGCTTTCTTTCCGAGGCCACGGCCACGTTGGCGG...CACTGGGTCACTTTTGGATGCTGGATCTTCTACCGTCTCATAGGCTGAGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACCACATTCAGTGGCTTaGACACCGTCAGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLPHSVA*TPSGPI
Trigger: AATGGGACCTGACGGTGTCCAAGCCACTGAATGTGG...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCAGGACCGCAGCCAGGTaGAAACTGAAGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCARTAAR*KLKPCR
Trigger: CCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCAAGCCCTGCTCCTCTGTaGTGTCATCCACATCGACAT +
Preference number: 4 (lower is better)
Translates to: GRISRARRRWCPRSRGSPSPAPL*CHPHRH
Trigger: ATGTCGATGTGGATGACACCACAGAGGAGCAGGGCT...TGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAAGCTCTGACCACTTGTaGACAGTGTATGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLSSDHL*TVYAMP
Trigger: CGGCATGGCATACACTGTCCACAAGTGGTCAGAGCT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCACGGTGTCTACCATAAGGCGGGGAGGCCCTaGATCTCCCCTTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GHNHLCPSHLVPCHGVYHKAGRP*ISPSLF
Trigger: AAACAGAGAAGGGGAGATCCAGGGCCTCCCCGCCTT...ATGGTAGACACCGTGACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GTAGCCCTGCTCCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGCCAACTGTGTGCATGTaGGTGTTCGGCATGCACACG +
Preference number: 4 (lower is better)
Translates to: VALLLCGVIHIDIKQGAQPTVCM*VFGMHT
Trigger: CGTGTGCATGCCGAACACCCACATGCACACAGTTGG...CTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGGAGCAGGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR TCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCSRGSP*TPLARA
Trigger: TGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR TCA 90 bp ACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCAAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TLPSWPQSSVPLASCAMSSRGSP*TPLARA
Trigger: TGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACT...TGACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR TCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVPQNSC*SGRRQH
Trigger: GTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGG...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGACAACTTCCACCATTaGCCGAGGCAGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCADNFHH*PRQLHI
Trigger: AATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACC +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAAGSSL*QLPPLT
Trigger: GGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp TCCTTCTCCTCGGTAAAGCCAGCCCCCGCCAACGTGGCCGTGGCCTCGGAAAGAGGCGGAGAGCATTCTTaGAAACATAGTTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: SFSSVKPAPANVAVASERGGEHS*KHSYLA
Trigger: GGCTAAATAACTATGTTTTCAAGAATGCTCTCCGCC...TCTTTCCGAGGCCACGGCCACGTTGGCGGGGGCTGGCTTTACCGAGGAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGGCCCAGCTGAGCTCTaGCCACTTGTGGACAGTGTA +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCGPAEL*PLVDSV
Trigger: TACACTGTCCACAAGTGGTCAGAGCTCAGCTGGGCC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTTCCAGCATCCAAAAGTaGCCCAGTGACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCSSIQK*PSDWPS
Trigger: GCTGGGCCAGTCACTGGGTCACTTTTGGATGCTGGA...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCATGTGCCTCAGCCTATaGGACGGTAGAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAMCLSL*DGRRSS
Trigger: GCTGGATCTTCTACCGTCTCATAGGCTGAGGCACAT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp TGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCTTCTCCTCGGTAAAGCCATGTGCCTCAGCCTATaGGACGGTAGAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: WLGHRQVPFQVILLLGKAMCLSL*DGRRSS
Trigger: GCTGGATCTTCTACCGTCTCATAGGCTGAGGCACAT...GGCTTTACCGAGGAGAAGGATCACCTGGAATGGGACCTGACGGTGTCCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCCAGCCTTGCAGTAGCTaGTGGAAAAATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAQPCSS*WKNSWR
Trigger: CCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTG...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATCAGCCTTGCAGTAGCTaGTGGAAAAATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHQPCSS*WKNSWR
Trigger: CCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTG...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGAAGCCCAGAGACACTaGCTTCATGGCCACAATCAT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLEAQRH*LHGHNH
Trigger: ATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp ACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCAGCCCGAAGACGATGGTaGCCACGAAGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TLPSWPQSSVPLASCAMSARRRW*PRSRGS
Trigger: GCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGC...TGACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGGACAGTGTATGCCATaGCGTAGCCCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCGQCMP*RSPAPL
Trigger: CAGAGGAGCAGGGCTACGGCATGGCATACACTGTCC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGTGCTGGAAAAATTCCTaGCGGCTAAAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKCWKNS*RLKVAI
Trigger: AATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCA...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CTCCAAAGAGCAAGTTTAAGGCTCGCACCCCCAGGCCCAAGCGATGCTGGTGCGTGCTGGAAAAATTCCTaGCGGCTAAAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: LQRASLRLAPPGPSDAGACWKNS*RLKVAI
Trigger: AATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCA...CGCACCAGCATCGCTTGGGCCTGGGGGTGCGAGCCTTAAACTTGCTCTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATTGCTGGAAAAATTCCTaGCGGCTAAAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: LAPVQVEAQRHCLHGHNHCWKNS*RLKVAI
Trigger: AATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCA...ATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AATCATCTGTGCCCCTCGCATCTTGTGCCATGTCACGGTGTCTACCATGTGCATGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: NHLCPSHLVPCHGVYHVHGRRGR*QGAARS
Trigger: AGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCC...ATGCACATGGTAGACACCGTGACATGGCACAAGATGCGAGGGGCACAGATGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGGAAGACGCCTCGATaGGAGGAATGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCRKTPR*EECRQR
Trigger: CCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCCT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGAGACACTGCCTTCATaGCCACAATCATCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAETLPS*PQSSVP
Trigger: GGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCCCACATTCAGTGGCTTaGACACCGTCAGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAPHSVA*TPSGPI
Trigger: AATGGGACCTGACGGTGTCCAAGCCACTGAATGTGG...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CCATGCCGTAGCCCTGCTCCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCTCTGACCACTTGTaGACAGTGTATGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: PCRSPAPLWCHPHRHQTGSSDHL*TVYAMP
Trigger: CGGCATGGCATACACTGTCCACAAGTGGTCAGAGCT...CCCTGTTTGATGTCGATGTGGATGACACCACAGAGGAGCAGGGCTACGGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTCTCATCCCCCATCAGTaGCACCCTGAGAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCLIPHQ*HPERGL
Trigger: AAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAG...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTACCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLPQNSC*SGRRQH
Trigger: GTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGG...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp ATTGACCGAGGCAGCTCCACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCGTCTTAAGAGGGTTATaGGGGTCCACAGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: IDRGSSTFSGLDTVRSHSVLRGL*GSTDVP
Trigger: AGGCACATCTGTGGACCCTCATAACCCTCTTAAGAC...GGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCTCGGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AGGCAGCTCCACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCGTCTTAAGAGGGTTATaGGGGTCCACAGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: RQLHIQWLGHRQVPFQVIVLRGL*GSTDVP
Trigger: AGGCACATCTGTGGACCCTCATAACCCTCTTAAGAC...GATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GTAGCCCTGCTCCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGTCAGGTACATCAGACTaGGCCACCAACTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: VALLLCGVIHIDIKQGAQSGTSD*ATNCVH
Trigger: ATGCACACAGTTGGTGGCTCAGTCTGATGTACCTGA...CTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGGAGCAGGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR GCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCTAAAGGTGGCCATTaGAGACCCCCACGGATGGAT +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCAKGGH*RPPRMD
Trigger: ATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAGRRQP*SSCWKN
Trigger: ATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCC...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AGGCAGCTCCACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCACGGTGTCTACCATGTaGATCTCACCCATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RQLHIQWLGHRQVPFQVITVSTM*ISPMSR
Trigger: CCTACTCATGGGTGAGATGCACATGGTAGACACCGT...GATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGCTGGAAAAATTCCTaGCGGCTAAAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLCWKNS*RLKVAI
Trigger: AATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCA...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCCCTTGCAGTAGCTGCTaGAAAAATTCCTGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: QWHPERGLKRVMRVHRCAPCSSC*KNSWRL
Trigger: TAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGG...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CCTCTGTGGTGTCATCCACATCGACATCAAACAGGGAGCCCAGGTAGGCCAGGTCCTTGCAGTAGCTGCTaGAAAAATTCCTGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: PLWCHPHRHQTGSPGRPGPCSSC*KNSWRL
Trigger: TAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGG...ACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGATGACACCACAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATCCTTGCAGTAGCTGCTaGAAAAATTCCTGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHPCSSC*KNSWRL
Trigger: TAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGG...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp AAAGCCCACAAAATAGTTGCTGAAGTGGAAGGAGACAGCACTCTCGTAGGCTCGAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KAHKIVAEVEGDSTLVGSRSSQI*SRPCWA
Trigger: TGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCT...CGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTATGCTTCAGGTAGGATaGCAACCCGAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCMLQVG*QPEPPE
Trigger: CTCTGGAGGCTCGGGTTGCCATCCTACCTGAAGCAT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR CCA 90 bp CACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCTTCTCCTCTGCCTTGTGGTGGGGTaGGGATTGACAGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: HIQWLGHRQVPFQVILLLCLVVG*GLTGMK
Trigger: TTTCATGCCTGTCAATCCCCACCCCACCACAAGGCA...GAGGAGAAGGATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CCATGCCGTAGCCCTGCTCCTCTGTGGTGTCATCCACATCGACATCAAACAGGGCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: PCRSPAPLWCHPHRHQTGPQNSC*SGRRQH
Trigger: GTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGG...CCCTGTTTGATGTCGATGTGGATGACACCACAGAGGAGCAGGGCTACGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGGTCCCATTCCAGGTaGTCCTTCTCCTCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCRSHSR*SFSSVK
Trigger: CTTTACCGAGGAGAAGGATCACCTGGAATGGGACCT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACC +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCAGSSL*QLPPLT
Trigger: GGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGGCGGAGAGCATTCTTaGAAACATAGTTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVGGEHS*KHSYLA
Trigger: GGCTAAATAACTATGTTTTCAAGAATGCTCTCCGCC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGGCGGAGAGCATTCTTaGAAACATAGTTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKGGEHS*KHSYLA
Trigger: GGCTAAATAACTATGTTTTCAAGAATGCTCTCCGCC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGGGCATGAAAATGGTGTaGTTTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKGMKMV*FCVCVC
Trigger: ACACACACACACACAAAATCACACCATTTTCATGCC...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGGCATGAAAATGGTGTaGTTTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVGMKMV*FCVCVC
Trigger: ACACACACACACACAAAATCACACCATTTTCATGCC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp GGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCACGGTGTCTACCATGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: GHNHLCPSHLVPCHGVYHGRRQP*SSCWKN
Trigger: ATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCC...ATGGTAGACACCGTGACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp GGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCACGGTGTCTACCATACGGTGTCTACCATGTaGATCTCACCCATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GHNHLCPSHLVPCHGVYHTVSTM*ISPMSR
Trigger: CCTACTCATGGGTGAGATGCACATGGTAGACACCGT...ATGGTAGACACCGTGACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGCACAGCAGGGCCAGTaGCAGGCTCCGGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLAQQGQ*QAPGHL
Trigger: AAGGTGGCCCGGAGCCTGGCACTGGCCCTGCTGTGC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000485288.7
CDS-3UTR GCA 90 bp TGTGCCTCAGCCTATGAGACGGTAGAAGATCCAGCATCCAAAAGTGACCCAGTGCCACCTCGCATCTTGTaGCATGTCACGGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: CASAYETVEDPASKSDPVPPRIL*HVTVST
Trigger: GGTAGACACCGTGACATGGCACAAGATGCGAGGTGG...CACTGGGTCACTTTTGGATGCTGGATCTTCTACCGTCTCATAGGCTGAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472520.5
CDS-3UTR CCA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATTGCTGGAAAAATTCCTaGCGGCTAAAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHCWKNS*RLKVAI
Trigger: AATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCA...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGAGACACTGCCTTCATaGCCACAATCATCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCETLPS*PQSSVP
Trigger: GGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp ACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCAGAGACACTGCCTTCATaGCCACAATCATCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: TLPSWPQSSVPLASCAMSETLPS*PQSSVP
Trigger: GGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTC...TGACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGCCCTGCTCCTCTGTaGTGTCATCCACATCGACAT +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCSPAPL*CHPHRH
Trigger: ATGTCGATGTGGATGACACCACAGAGGAGCAGGGCT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGCTCTGACCACTTGTaGACAGTGTATGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCSSDHL*TVYAMP
Trigger: CGGCATGGCATACACTGTCCACAAGTGGTCAGAGCT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCTTCTCCTCCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: HIQWLGHRQVPFQVILLLPQNSC*SGRRQH
Trigger: GTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGG...GAGGAGAAGGATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAGGCGGAGAGCATTCTTaGAAACATAGTTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLGGEHS*KHSYLA
Trigger: GGCTAAATAACTATGTTTTCAAGAATGCTCTCCGCC...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGTCTTAAGAGGGTTATaGGGGTCCACAGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCVLRGL*GSTDVP
Trigger: AGGCACATCTGTGGACCCTCATAACCCTCTTAAGAC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AATCATCTGTGCCCCTCGCATCTTGTGCCATGTCACGGTGTCTACCATGTGCATCAGCCTTGCAGTAGCTaGTGGAAAAATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: NHLCPSHLVPCHGVYHVHQPCSS*WKNSWR
Trigger: CCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTG...ATGCACATGGTAGACACCGTGACATGGCACAAGATGCGAGGGGCACAGATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp ACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCACGGTGTCTACCATGTGCGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: TIICAPRILCHVTVSTMCGRRQP*SSCWKN
Trigger: ATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCC...GCACATGGTAGACACCGTGACATGGCACAAGATGCGAGGGGCACAGATGATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR GCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTACGGTGTCTACCATGTaGATCTCACCCATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCTVSTM*ISPMSR
Trigger: CCTACTCATGGGTGAGATGCACATGGTAGACACCGT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGAAGCCCAGAGACACTaGCTTCATGGCCACAATCAT +
Preference number: 4 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCEAQRH*LHGHNH
Trigger: ATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTC...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGCTCCGGGCCACCTTCTaGAGCCACCGGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLLRATF*SHRQLS
Trigger: ACTGAGCTGCCGGTGGCTGCAGAAGGTGGCCCGGAG...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATACCTCGCTTAAAGGATaGACTCTGGCACTCACATTT +
Preference number: 4 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHTSLKG*TLALTF
Trigger: AAATGTGAGTGCCAGAGTGCATCCTTTAAGCGAGGT...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS-3UTR CCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCCCACCGGCAGCTCAGTaGGCGGCCTTGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLPPAAQ*AALDSL
Trigger: CAAGCTGTCCAAGGCCGCCCACTGAGCTGCCGGTGG...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGCCACCGGCAGCTCAGTaGGCGGCCTTGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLPPAAQ*AALDSL
Trigger: CAAGCTGTCCAAGGCCGCCCACTGAGCTGCCGGTGG...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR TCA 90 bp AAAGCCCACAAAATAGTTGCTGAAGTGGAAGGAGACAGCACTCTCGTAGGCTCGAGGTCCCATTCCAGGTaGTCCTTCTCCTCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: KAHKIVAEVEGDSTLVGSRSHSR*SFSSVK
Trigger: CTTTACCGAGGAGAAGGATCACCTGGAATGGGACCT...CGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCCGCTGGCTGCATAGGTaGCCAGCACAGCCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLRWLHR*PAQPRR
Trigger: CCTTCTCGGCTGTGCTGGTCACCTATGCAGCCAGCG...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGGCAGGAAAGAAGCCGTaGTCCTGGGGACCGAGGACG +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLAGKKP*SWGPRT
Trigger: CGTCCTCGGTCCCCAGGACCACGGCTTCTTTCCTGC...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGGCCCATGAACTCCACTaGCGAGGGCACCGTACCCAC +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLAHELH*RGHRTH
Trigger: GTGGGTACGGTGCCCTCGCCAGTGGAGTTCATGGGC...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGCCGCCAACGTGGCCGTaGCCTCGGAAAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLPPTWP*PRKESP
Trigger: TGGGCTTTCTTTCCGAGGCCACGGCCACGTTGGCGG...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGCAGCCAGGTGGAAACTaGAGCCATGTAGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLQPGGN*SHVGGR
Trigger: GCGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTG...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGACAAGACACAGGCACTaGGGATCCGAGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLTRHRH*GSEPGA
Trigger: AGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp CACATTCAGTGGCTTGGACACCGTCAGGTCCCATTCCAGGTGATCCTTCTCCTCGGCATGAAAATGGTGTaGTTTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HIQWLGHRQVPFQVILLLGMKMV*FCVCVC
Trigger: ACACACACACACACAAAATCACACCATTTTCATGCC...GAGGAGAAGGATCACCTGGAATGGGACCTGACGGTGTCCAAGCCACTGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLRSSQI*SRPCWA
Trigger: TGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCT...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLGRRGR*QGAARS
Trigger: AGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCC...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGAGGGGCCCACGCAAGTaGACAGCACAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLRGPRK*TAQGTA
Trigger: TGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR TCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGAGTAGAGGTAGCCCATaGACTCCACTGGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLSRGSP*TPLARA
Trigger: TGCCCTCGCCAGTGGAGTTCATGGGCTACCTCTACT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR TCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGGGCCCAGCTGAGCTCTaGCCACTTGTGGACAGTGTA +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLGPAEL*PLVDSV
Trigger: TACACTGTCCACAAGTGGTCAGAGCTCAGCTGGGCC...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLIWSRP*WAVGRR
Trigger: TCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGAT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGCCTGCCACGGTGCTTaGATGCTTCAGGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLACHGA*MLQVGW
Trigger: CCATCCTACCTGAAGCATGCAAGCACCGTGGCAGGC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
CDS-3UTR GCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGGCCTGCCACGGTGCTTaGATGCTTCAGGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLACHGA*MLQVGW
Trigger: CCATCCTACCTGAAGCATGCAAGCACCGTGGCAGGC...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
CDS-3UTR GCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGCTGAAGAACCCGCCTaGCACGGTGCTTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLAEEPA*HGACML
Trigger: AAGCATGCAAGCACCGTGGCAGGCGGGTTCTTCAGC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
CDS-3UTR GCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGCCCGAAGACGATGGTaGCCACGAAGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLARRRW*PRSRGS
Trigger: GCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGAGGAAGACGCCTCGATaGGAGGAATGTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLRKTPR*EECRQR
Trigger: CCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCCT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR GCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGCTAAAGGTGGCCATTaGAGACCCCCACGGATGGAT +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLAKGGH*RPPRMD
Trigger: ATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCCTTGTGGACAGTGTATaGCATGCCGTAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLLVDSV*HAVALL
Trigger: GAGCAGGGCTACGGCATGGCATACACTGTCCACAAG...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGCAGACCCCCACGGATaGATGGCCAGATGGATAGAT +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLADPHG*MARWID
Trigger: ATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCCAGCTCCACATTCAGTaGCTTGGACACCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLQLHIQ*LGHRQV
Trigger: GACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTG...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGCAGCTCCACATTCAGTaGCTTGGACACCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLQLHIQ*LGHRQV
Trigger: GACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTG...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGAGGACCGCAGCCAGGTaGAAACTGAAGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLRTAAR*KLKPCR
Trigger: CCTACATGGCTTCAGTTTCCACCTGGCTGCGGTCCT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGACAACTTCCACCATTaGCCGAGGCAGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLDNFHH*PRQLHI
Trigger: AATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGCAGGTTCCAGCTTGTaGCAACTTCCACCATTGACC +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLAGSSL*QLPPLT
Trigger: GGTCAATGGTGGAAGTTGTCACAAGCTGGAACCTGC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCATGTGCCTCAGCCTATaGGACGGTAGAAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLMCLSL*DGRRSS
Trigger: GCTGGATCTTCTACCGTCTCATAGGCTGAGGCACAT...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGCAGCCTTGCAGTAGCTaGTGGAAAAATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLQPCSS*WKNSWR
Trigger: CCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTG...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCAGCCCTGCTCCTCTGTaGTGTCATCCACATCGACAT +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLSPAPL*CHPHRH
Trigger: ATGTCGATGTGGATGACACCACAGAGGAGCAGGGCT...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGAGCCCTGCTCCTCTGTaGTGTCATCCACATCGACAT +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLSPAPL*CHPHRH
Trigger: ATGTCGATGTGGATGACACCACAGAGGAGCAGGGCT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGAGCTCTGACCACTTGTaGACAGTGTATGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLSSDHL*TVYAMP
Trigger: CGGCATGGCATACACTGTCCACAAGTGGTCAGAGCT...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCTGCCTTGTGGTGGGGTaGGGATTGACAGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLCLVVG*GLTGMK
Trigger: TTTCATGCCTGTCAATCCCCACCCCACCACAAGGCA...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR TCA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCGTCTTAAGAGGGTTATaGGGGTCCACAGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLVLRGL*GSTDVP
Trigger: AGGCACATCTGTGGACCCTCATAACCCTCTTAAGAC...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR GCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLGRRQP*SSCWKN
Trigger: ATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCC...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CCA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGTGCTGGAAAAATTCCTaGCGGCTAAAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: HENGVILCVCVCVCVEVLCWKNS*RLKVAI
Trigger: AATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCA...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CAA 90 bp CCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGAGGAGGCGGTCACCGTaGAGGGGGATGAAGTACGGG +
Preference number: 5 (lower is better)
Translates to: PYPPRPGPGRSPETLPSWRRRSP*RGMKYG
Trigger: CCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCT...CCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000528612.5
CDS TCA 90 bp GGTGCGAACAGTCTGGCGGGCACCGCTTTGACAAGACACAGGCACTaGGGATCCGAGCCAGGCGCTTCCGGAGGACTAGGGTGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: GANSLAGTALTRHRH*GSEPGASGGLGWWG
Trigger: TCCCCACCACCCTAGTCCTCCGGAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS CCA 90 bp CAGAGGAGGCGGCAGGCGAGGCAGATGGCAAGGAGCAGCCAGATCTaGTCAAGGCCCTGCTGGGCAGTAGGCAGGAGACAGCCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: QRRRQARQMARSSQI*SRPCWAVGRRQPCS
Trigger: ACTGCAAGGCTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCCGCCTCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS TCA 90 bp CCTCACCAAGCGATGCTGGTGCGAACAGTCTGGCGGGCACCGCTTTaGCAAGACACAGGCACTGAGGATCCGAGCCAGGCGCTTCCGGAG +
Preference number: 5 (lower is better)
Translates to: PHQAMLVRTVWRAPL*QDTGTEDPSQALPE
Trigger: CTCCGGAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGACTGTTCGCACCAGCATCGCTTGGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459953.1
ENST00000683804.1
CDS-3UTR CAA 90 bp CCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACATGTGCCCCTCGCATCTaGTGCCATGTCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PTSPRSRSKPRDTAFMATCAPRI*CHVTVS
Trigger: AGACACCGTGACATGGCACAAGATGCGAGGGGCACA...TGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS TCA 90 bp GGGAGGAATGTCGGCAGAGGAACAGCACGAGGTAGCACAGGAGGCTaGGCAGCACGACCCAAACCATGTGCAGCGAGCCTCCAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GRNVGRGTARGSTGG*AARPKPCAASLQRR
Trigger: CCTCCTCTGGAGGCTCGCTGCACATGGTTTGGGTCGTGCTGCTCAGCCTCCTGTGCTACCTCGTGCTGTTCCTCTGCCGACATTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000491243.5
ENST00000528612.5
CDS GCA 90 bp CACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTaGCTTCATGGCCACAATCATCTGTGCCCCTATGTGTGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: HRTHLAPVQVEAQRH*LHGHNHLCPYVWCP
Trigger: TGGGCACCACACATAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 90 bp AGGATGGCAACCCGAGCCTCCAGAGGAGGCGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCTGGTCAAGGCCATTTCAGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: RMATRASRGGGRRGR*QGAARSGQGHFSLG
Trigger: CCCCAAACTGAAATGGCCTTGACCAGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCCGCCTCCTCTGGAGGCTCGGGTTGCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486272.1
CDS-3UTR CAA 90 bp GAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGAGGCGGTCACCGTaGAGGGGGATGAAGTACGGG +
Preference number: 5 (lower is better)
Translates to: ERGPSLIPHQWHPERGLKRRRSP*RGMKYG
Trigger: CCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCT...CTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CAA 90 bp GTGATCCTTCTCCTCGGTAAAGCCAGCCCCCGCCAACGTGGCCGTGGCCTCGGATCCACATTCAGTGGCTaGGACACCGTCAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: VILLLGKASPRQRGRGLGSTFSG*DTVRSH
Trigger: ATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGA...TCCGAGGCCACGGCCACGTTGGCGGGGGCTGGCTTTACCGAGGAGAAGGATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CAA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTCTTACCATGGTGCCCTaGCGAAGGAGGCGGTCACCG +
Preference number: 5 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVLTMVP*RRRRSP
Trigger: CGGTGACCGCCTCCTTCGCAAGGGCACCATGGTAAG...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359882.8
CDS-3UTR CAA 90 bp GCACCGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCACACTCACATTTCAGTTaGGGGCTGCCCAGCCCATGT +
Preference number: 5 (lower is better)
Translates to: APYPPRPGPGRSPETLPSHSHFS*GLPSPC
Trigger: ACATGGGCTGGGCAGCCCCAAACTGAAATGTGAGTG...TGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS GCA 90 bp CAGGCGAGGCAGATGGCAAGGAGCAGCCAGATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGACAGCCTTGCAGTAGCTGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: QARQMARSSQIWSRP*WAVGRRQPCSSCWK
Trigger: TTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS GCA 90 bp CTGGAAGAAGTGGTAGAGGCTGAAGAACCCGCCTGCCACGGTGCTTaGATGCTTCAGGTAGGATGGCAACCCGAGCCTCCAGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LEEVVEAEEPACHGA*MLQVGWQPEPPEEA
Trigger: CGCCTCCTCTGGAGGCTCGGGTTGCCATCCTACCTGAAGCATGCAAGCACCGTGGCAGGCGGGTTCTTCAGCCTCTACCACTTCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000486272.1
ENST00000489940.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS CCA 90 bp GGGAGCGGGTGTCCGTGGGGCAGACCTCGCTTAAAGGATGCACTCTaGCACTCACATTTCAGTTTGGGGCTGCCCAGCCCATGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: GSGCPWGRPRLKDAL*HSHFSLGLPSPCRG
Trigger: GCCTCTACATGGGCTGGGCAGCCCCAAACTGAAATGTGAGTGCCAGAGTGCATCCTTTAAGCGAGGTCTGCCCCACGGACACCCGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000537758.6
CDS-3UTR CAA 90 bp GGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTAAGGAGGCGGTCACCGTaGAGGGGGATGAAGTACGGG +
Preference number: 5 (lower is better)
Translates to: GLPSSPISGTLRGVLRGLRRRSP*RGMKYG
Trigger: CCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCT...TAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CAA 90 bp GCTGAAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACTTGCGAAGGAGAGGAGGCGGTCACCGTaGAGGGGGATGAAGTACGGG +
Preference number: 5 (lower is better)
Translates to: AEVEGDSTLVGSQPLAKERRRSP*RGMKYG
Trigger: CCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCT...CTCCTTCGCAAGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CAA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCGCTTTGCGTTTCTTGTaGCGAAGGAGGCGGTCACCG +
Preference number: 5 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPALRFL*RRRRSP
Trigger: CGGTGACCGCCTCCTTCGCAACAAGAAACGCAAAGC...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326194.11
ENST00000355961.8
CDS-3UTR CAA 90 bp CGTACCCACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCTGAGCTCTGACCACTaGTGGACAGTGTATGCCATG +
Preference number: 5 (lower is better)
Translates to: RTHLAPVQVEAQRHCLHGLSSDH*WTVYAM
Trigger: CATGGCATACACTGTCCACAAGTGGTCAGAGCTCAG...GCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTGGGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS TCA 90 bp CAGGGCACAGTGGGTTCCAGGACTGAGGATGCCCAGGGTACCCCCTaGGATAGGGAAGAGATGGTTCAGGGAGCCTCCTATGCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: QGTVGSRTEDAQGTP*DREEMVQGASYAEA
Trigger: TGCCTCTGCATAGGAGGCTCCCTGAACCATCTCTTCCCTATCTCAGGGGGTACCCTGGGCATCCTCAGTCCTGGAACCCACTGTGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS GCA 90 bp GGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACCTTACCATGGTaGCCCTGGCTTTGCGTTTCTTGTTGCGAAGGAGGCGGTCACCGT +
Preference number: 5 (lower is better)
Translates to: GRRQHSRRLAATLPW*PWLCVSCCEGGGHR
Trigger: ACGGTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS GCA 90 bp ACACAGAGGGAGCGGGTGTCCGTGGGGCAGACCTCGCTTAAAGGATaGACTCTGGCACTCACATTTCAGTTTGGGGCTGCCCAGCCCATG +
Preference number: 5 (lower is better)
Translates to: TQRERVSVGQTSLKG*TLALTFQFGAAQPM
Trigger: CATGGGCTGGGCAGCCCCAAACTGAAATGTGAGTGCCAGAGTGCATCCTTTAAGCGAGGTCTGCCCCACGGACACCCGCTCCCTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000537758.6
CDS GCA 90 bp CTCTGCCCCCACTCATGTCAGCCCCACTCCACGTGCCCTCACACCTaGCCTCATTTACCTGGCTTTGCGTTTCTTGTTGCGAAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LCPHSCQPHSTCPHT*PHLPGFAFLVAKEA
Trigger: CGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGTAAATGAGGGCAGGTGTGAGGGCACGTGGAGTGGGGCTGACATGAGTGGGGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 90 bp AGGCCCTGCTGGGCAGTAGGCAGGAGACAGCCTTGCAGTAGCTGCTaGAAAAATTCCTGGCGGCTAAAGGTGGCCATTGCAGACCCCCAC +
Preference number: 5 (lower is better)
Translates to: RPCWAVGRRQPCSSC*KNSWRLKVAIADPH
Trigger: GTGGGGGTCTGCAATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCCTACTGCCCAGCAGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS CCA 90 bp CGGCTAAAGGTGGCCATTGCAGACCCCCACGGATGGATGGCCAGATaGATAGATCTGTCAAAGCAGGGACACAGAGGGAGCGGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: RLKVAIADPHGWMAR*IDLSKQGHRGSGCP
Trigger: CGGACACCCGCTCCCTCTGTGTCCCTGCTTTGACAGATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000537758.6
CDS CCA 90 bp GCAGAGGCATCCAAGATGAGGGTACTGTTCACAGTGAGGGCATCCTaGGTTGGGGGAGGTGCGAGTCTCCAGGCAGAGGAGGAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: AEASKMRVLFTVRAS*VGGGASLQAEEEEW
Trigger: CCACTCTTCCTCCTCTGCCTGGAGACTCGCACCTCCCCCAACCCAGGATGCCCTCACTGTGAACAGTACCCTCATCTTGGATGCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS-3UTR CAA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCAGGAGGCGGTCACCGTaGAGGGGGATGAAGTACGGG +
Preference number: 5 (lower is better)
Translates to: QWHPERGLKRVMRVHRCARRRSP*RGMKYG
Trigger: CCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCT...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CAA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTGCTTTGCGTTTCTTGTaGCGAAGGAGGCGGTCACCG +
Preference number: 5 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVALRFL*RRRRSP
Trigger: CGGTGACCGCCTCCTTCGCAACAAGAAACGCAAAGC...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326194.11
ENST00000355961.8
CDS-3UTR CAA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCATGGTGCCCCTGGCTTaGCGTTTCTTGTTGCGAAGG +
Preference number: 5 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPMVPLA*RFLLRR
Trigger: CCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCAT...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS-3UTR CAA 90 bp AGGGGGTCAAGGAGTAGAGAGAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: RGSRSRERAFPHPPSVAPSTFSG*DTVRSH
Trigger: ATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGA...GGGTGCCACTGATGGGGGATGAGGGAAGGCCCTCTCTCTACTCCTTGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS GCA 90 bp TCCAGGCCCTCTCCTACCTCAGGGCCTTTCCACTGGGTGTCTCTCTaGCTGGAACGTTTCCCTCTCTCACCTCCTTCGGTTAAAGGCCTC +
Preference number: 5 (lower is better)
Translates to: SRPSPTSGPFHWVSL*LERFPLSPPSVKGL
Trigger: GAGGCCTTTAACCGAAGGAGGTGAGAGAGGGAAACGTTCCAGGCAGAGAGACACCCAGTGGAAAGGCCCTGAGGTAGGAGAGGGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS CCA 90 bp GCAGTAGGCAGGAGACAGCCTTGCAGTAGCTGCTGGAAAAATTCCTaGCGGCTAAAGGTGGCCATTGCAGACCCCCACGGATGGATGGCC +
Preference number: 5 (lower is better)
Translates to: AVGRRQPCSSCWKNS*RLKVAIADPHGWMA
Trigger: GGCCATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCCTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS CCA 90 bp AGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACCTTACCATaGTGCCCCTGGCTTTGCGTTTCTTGTTGCGAAGGAGGCGGTCAC +
Preference number: 5 (lower is better)
Translates to: SGRRQHSRRLAATLP*CPWLCVSCCEGGGH
Trigger: GTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS CCA 90 bp GAGTTGACGGTCAGACACACTTGGACACACAGAACCCATTGGTCATaGGCTCTGCCCCCACTCATGTCAGCCCCACTCCACGTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: ELTVRHTWTHRTHWS*ALPPLMSAPLHVPS
Trigger: TGAGGGCACGTGGAGTGGGGCTGACATGAGTGGGGGCAGAGCCCATGACCAATGGGTTCTGTGTGTCCAAGTGTGTCTGACCGTCAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS-3UTR CAA 90 bp CAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGTGTGCCCCTCGCATCTaGTGCCATGTCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: QVEAQRHCLHGHNHLCPSCAPRI*CHVTVS
Trigger: AGACACCGTGACATGGCACAAGATGCGAGGGGCACA...CGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000528612.5
CDS-3UTR CAA 90 bp GAGGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGCTGAGCTCTGACCACTaGTGGACAGTGTATGCCATG +
Preference number: 5 (lower is better)
Translates to: EGLPSSPISGTLRGVLRGLSSDH*WTVYAM
Trigger: CATGGCATACACTGTCCACAAGTGGTCAGAGCTCAG...CCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CAA 90 bp ATGGCCAGAGCTCCAAAGAGCAAGTTTAAGGCTCGCACCCCCAGGCCCAAGCGACAGCCACCTCGCATCTaGTGCCATGTCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: MARAPKSKFKARTPRPKRQPPRI*CHVTVS
Trigger: AGACACCGTGACATGGCACAAGATGCGAGGTGGCTG...TCGCTTGGGCCTGGGGGTGCGAGCCTTAAACTTGCTCTTTGGAGCTCTGGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472520.5
CDS TCA 90 bp GCAGCACGACCCAAACCATGTGCAGCTGGAAGAAGTGGTAGAGGCTaGAGAACCCGCCTGCCACGGTGCTTGCATGCTTCAGGTAGGATG +
Preference number: 5 (lower is better)
Translates to: AARPKPCAAGRSGRG*RTRLPRCLHASGRM
Trigger: CATCCTACCTGAAGCATGCAAGCACCGTGGCAGGCGGGTTCTTCAGCCTCTACCACTTCTTCCAGCTGCACATGGTTTGGGTCGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000489940.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS TCA 90 bp GGGAGGAATGTCGGCAGAGGAACAGCACGAGGTAGCACAGGAGGCTaGGCAGCACGACCCAAACCATGTGCAGCTGGAAGAAGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: GRNVGRGTARGSTGG*AARPKPCAAGRSGR
Trigger: TCTACCACTTCTTCCAGCTGCACATGGTTTGGGTCGTGCTGCTCAGCCTCCTGTGCTACCTCGTGCTGTTCCTCTGCCGACATTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000489940.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS TCA 90 bp CCAACGTGGCCGTGGCCTCGGAAAGAAAGCCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: PTWPWPRKESPQNSC*SGRRQHSRRLAATW
Trigger: CCAGGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGCTTTCTTTCCGAGGCCACGGCCACGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355961.8
ENST00000684722.1
CDS TCA 90 bp CCCAGCCCATGTAGAGGCACGGTACTGGAGGACTGGGGGAAGGCGTaGGAAGTCAGGTACATCAGACTGAGCCACCAACTGTGTGCATGT +
Preference number: 5 (lower is better)
Translates to: PSPCRGTVLEDWGKA*EVRYIRLSHQLCAC
Trigger: ACATGCACACAGTTGGTGGCTCAGTCTGATGTACCTGACTTCTCACGCCTTCCCCCAGTCCTCCAGTACCGTGCCTCTACATGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000485288.7
ENST00000486272.1
ENST00000537758.6
ENST00000683923.1
CDS GCA 90 bp CAGGTCGAAGCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTaGCCCTATGTGTGGTGCCCATGGTCAAGTGGATGGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QVEAQRHCLHGHNHL*PYVWCPWSSGWAES
Trigger: GCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 90 bp TGGCCACAATCATCTGTGCCCCTATGTGTGGTGCCCATGGTCAAGTaGATGGGCAGAGAGCAGATCAGCATGGCAAGGAGGAGGTGCACC +
Preference number: 5 (lower is better)
Translates to: WPQSSVPLCVVPMVK*MGREQISMARRRCT
Trigger: GGTGCACCTCCTCCTTGCCATGCTGATCTGCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 90 bp ATGCATGAGCTATCCTATAATATGGCATGGCCCTGCAGGCTCACGTaGCCAGACGGCCAAAGCCAGCCACCATCAGAGGCCCGACTTCAC +
Preference number: 5 (lower is better)
Translates to: MHELSYNMAWPCRLT*PDGQSQPPSEARLH
Trigger: GTGAAGTCGGGCCTCTGATGGTGGCTGGCTTTGGCCGTCTGGCCACGTGAGCCTGCAGGGCCATGCCATATTATAGGATAGCTCATGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS-3UTR CAA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCTGTGCCCCTCGCATCTaGTGCCATGTCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: QWHPERGLKRVMRVHRCACAPRI*CHVTVS
Trigger: AGACACCGTGACATGGCACAAGATGCGAGGGGCACA...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CAA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTAGGAGGCGGTCACCGTaGAGGGGGATGAAGTACGGG +
Preference number: 5 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCRRRSP*RGMKYG
Trigger: CCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCT...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CAA 90 bp GGGCCTTCCCTCATCCCCCATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTCTGAGCTCTGACCACTaGTGGACAGTGTATGCCATG +
Preference number: 5 (lower is better)
Translates to: GPSLIPHQWHPERGLKRVLSSDH*WTVYAM
Trigger: CATGGCATACACTGTCCACAAGTGGTCAGAGCTCAG...AACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATGGGGGATGAGGGAAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS TCA 90 bp TACTGGAGGACTGGGGGAAGGCGTGAGAAGTCAGGTACATCAGACTaGGCCACCAACTGTGTGCATGTGGGTGTTCGGCATGCACACGCA +
Preference number: 5 (lower is better)
Translates to: YWRTGGRREKSGTSD*ATNCVHVGVRHAHA
Trigger: TGCGTGTGCATGCCGAACACCCACATGCACACAGTTGGTGGCTCAGTCTGATGTACCTGACTTCTCACGCCTTCCCCCAGTCCTCCAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000485288.7
ENST00000486272.1
ENST00000537758.6
ENST00000683923.1
CDS GCA 90 bp CAGATCTGGTCAAGGCCCTGCTGGGCAGTAGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAATTCCTGGCGGCTAAAGGTGGCCATT +
Preference number: 5 (lower is better)
Translates to: QIWSRPCWAVGRRQP*SSCWKNSWRLKVAI
Trigger: AATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS CCA 90 bp CACAATCATCTGTGCCCCTATGTGTGGTGCCCATGGTCAAGTGGATaGGCAGAGAGCAGATCAGCATGGCAAGGAGGAGGTGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: HNHLCPYVWCPWSSG*AESRSAWQGGGAPG
Trigger: ACCTGGTGCACCTCCTCCTTGCCATGCTGATCTGCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS-3UTR CAA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: QWHPERGLKRVMRVHRCASTFSG*DTVRSH
Trigger: ATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGA...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CAA 90 bp GAAGGATATCCAGGGCCCGAAGACGATGGTGCCCACGAAGTAGAGGTAGCCCATCACTCACATTTCAGTTaGGGGCTGCCCAGCCCATGT +
Preference number: 5 (lower is better)
Translates to: EGYPGPEDDGAHEVEVAHHSHFS*GLPSPC
Trigger: ACATGGGCTGGGCAGCCCCAAACTGAAATGTGAGTG...ATGGGCTACCTCTACTTCGTGGGCACCATCGTCTTCGGGCCCTGGATATCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470275.2
ENST00000485288.7
CDS TCA 90 bp CCAACGTGGCCGTGGCCTCGGAAAGAAAGCCCACAAAATAGTTGCTaGAGTGGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACCTTA +
Preference number: 5 (lower is better)
Translates to: PTWPWPRKESPQNSC*SGRRQHSRRLAATL
Trigger: TAAGGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGCTTTCTTTCCGAGGCCACGGCCACGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326194.11
ENST00000359882.8
ENST00000682661.1
CDS GCA 90 bp TGGCTCAAATGGATGCATGAGCTATCCTATAATATGGCATGGCCCTaGAGGCTCACGTGGCCAGACGGCCAAAGCCAGCCACCATCAGAG +
Preference number: 5 (lower is better)
Translates to: WLKWMHELSYNMAWP*RLTWPDGQSQPPSE
Trigger: CTCTGATGGTGGCTGGCTTTGGCCGTCTGGCCACGTGAGCCTGCAGGGCCATGCCATATTATAGGATAGCTCATGCATCCATTTGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 90 bp TGGATAGATCTGTCAAAGCAGGGACACAGAGGGAGCGGGTGTCCGTaGGGCAGACCTCGCTTAAAGGATGCACTCTGGCACTCACATTTC +
Preference number: 5 (lower is better)
Translates to: WIDLSKQGHRGSGCP*GRPRLKDALWHSHF
Trigger: GAAATGTGAGTGCCAGAGTGCATCCTTTAAGCGAGGTCTGCCCCACGGACACCCGCTCCCTCTGTGTCCCTGCTTTGACAGATCTATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000537758.6
CDS CCA 90 bp TGCCTTCATGGCCACAATCATCTGTGCCCCTATGTGTGGTGCCCATaGTCAAGTGGATGGGCAGAGAGCAGATCAGCATGGCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: CLHGHNHLCPYVWCP*SSGWAESRSAWQGG
Trigger: TCCTCCTTGCCATGCTGATCTGCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTGGCCATGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 90 bp CAGAGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTATGTGTaGTGCCCATGGTCAAGTGGATGGGCAGAGAGCAGATCAGCATGG +
Preference number: 5 (lower is better)
Translates to: QRHCLHGHNHLCPYV*CPWSSGWAESRSAW
Trigger: CCATGCTGATCTGCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 90 bp CTGTCTCTCCAGTGCTGTGAACAGTCCAGTCCGATGGTGATGGGATaGCATACATTTCAGGCCCATATATCAAATGGGGCGGGCGACGGG +
Preference number: 5 (lower is better)
Translates to: LSLQCCEQSSPMVMG*HTFQAHISNGAGDG
Trigger: CCCGTCGCCCGCCCCATTTGATATATGGGCCTGAAATGTATGCCATCCCATCACCATCGGACTGGACTGTTCACAGCACTGGAGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486272.1
ENST00000489940.5
ENST00000537758.6
ENST00000683923.1
CDS-3UTR CAA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTTGTGCCCCTCGCATCTaGTGCCATGTCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCCAPRI*CHVTVS
Trigger: AGACACCGTGACATGGCACAAGATGCGAGGGGCACA...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CAA 90 bp GACACTGCCTTCATGGCCACAATCATCTGTGCCCCTCGCATCTTGTGCCATGTCTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: DTAFMATIICAPRILCHVSTFSG*DTVRSH
Trigger: ATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGA...GACATGGCACAAGATGCGAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS-3UTR CAA 90 bp CAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTGCCCTGAGCTCTGACCACTaGTGGACAGTGTATGCCATG +
Preference number: 5 (lower is better)
Translates to: QWHPERGLKRVMRVHRCALSSDH*WTVYAM
Trigger: CATGGCATACACTGTCCACAAGTGGTCAGAGCTCAG...GGCACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS GCA 90 bp AGACACTGCCTTCATGGCCACAATCATCTGTGCCCCTATGTGTGGTaGCCATGGTCAAGTGGATGGGCAGAGAGCAGATCAGCATGGCAA +
Preference number: 5 (lower is better)
Translates to: RHCLHGHNHLCPYVW*PWSSGWAESRSAWQ
Trigger: TTGCCATGCTGATCTGCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 90 bp AAAAATTCCTGGCGGCTAAAGGTGGCCATTGCAGACCCCCACGGATaGATGGCCAGATGGATAGATCTGTCAAAGCAGGGACACAGAGGG +
Preference number: 5 (lower is better)
Translates to: KNSWRLKVAIADPHG*MARWIDLSKQGHRG
Trigger: CCCTCTGTGTCCCTGCTTTGACAGATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGCCGCCAGGAATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000537758.6
CDS CCA 90 bp TCCGATGGTGATGGGATGGCATACATTTCAGGCCCATATATCAAATaGGGCGGGCGACGGGAAGGGGAATCCCTGGTTTCCAAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: SDGDGMAYISGPYIK*GGRREGESLVSKVE
Trigger: CTCTACCTTGGAAACCAGGGATTCCCCTTCCCGTCGCCCGCCCCATTTGATATATGGGCCTGAAATGTATGCCATCCCATCACCATCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486272.1
ENST00000489940.5
ENST00000537758.6
ENST00000683923.1
CDS GCA 90 bp ATGGGACAGATAGGCAGGTGGGCAAGGAAGCCCAGGACAGATAGATaGCCTTACTCCAGAGAGTCAGGCACATACATGACACGAGACAGA +
Preference number: 5 (lower is better)
Translates to: MGQIGRWARKPRTDR*PYSRESGTYMTRDR
Trigger: TCTGTCTCGTGTCATGTATGTGCCTGACTCTCTGGAGTAAGGGCATCTATCTGTCCTGGGCTTCCTTGCCCACCTGCCTATCTGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 90 bp CCCTCCTGGAGGGCCATCAGCAGGATGAGAATACCCACAACCTGTTaGAGCCCCCAGGATAAAGTCCTTAGATGGCCTCAAACTTCACAT +
Preference number: 5 (lower is better)
Translates to: PSWRAISRMRIPTTC*SPQDKVLRWPQTSH
Trigger: ATGTGAAGTTTGAGGCCATCTAAGGACTTTATCCTGGGGGCTCCAACAGGTTGTGGGTATTCTCATCCTGCTGATGGCCCTCCAGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459953.1
CDS CCA 90 bp AACCACAGTCTCTGTCTAGTCATGGAGTTGACGGTCAGACACACTTaGACACACAGAACCCATTGGTCATGGGCTCTGCCCCCACTCATG +
Preference number: 5 (lower is better)
Translates to: NHSLCLVMELTVRHT*THRTHWSWALPPLM
Trigger: CATGAGTGGGGGCAGAGCCCATGACCAATGGGTTCTGTGTGTCCAAGTGTGTCTGACCGTCAACTCCATGACTAGACAGAGACTGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 90 bp GACACCGTCAGGTCCCTGGGGGCAGAAGAGATATGCAAATCCATTTaGGATCTCAACTCATCTGACCGCCACACTTCTGTCTTGGCCGTT +
Preference number: 5 (lower is better)
Translates to: DTVRSLGAEEICKSI*DLNSSDRHTSVLAV
Trigger: AACGGCCAAGACAGAAGTGTGGCGGTCAGATGAGTTGAGATCCCAAATGGATTTGCATATCTCTTCTGCCCCCAGGGACCTGACGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682661.1
CDS-3UTR CAA 90 bp CATCAGTGGCACCCTGAGAGGGGTCTTAAGAGGGTTATGAGGGTCCACAGATGTCTGAGCTCTGACCACTaGTGGACAGTGTATGCCATG +
Preference number: 5 (lower is better)
Translates to: HQWHPERGLKRVMRVHRCLSSDH*WTVYAM
Trigger: CATGGCATACACTGTCCACAAGTGGTCAGAGCTCAG...ACATCTGTGGACCCTCATAACCCTCTTAAGACCCCTCTCAGGGTGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS TCA 90 bp AAGGACCTCTGTCTCTCCAGTGCTGTGAACAGTCCAGTCCGATGGTaGTGGGATGGCATACATTTCAGGCCCATATATCAAATGGGGCGG +
Preference number: 5 (lower is better)
Translates to: KDLCLSSAVNSPVRW*WDGIHFRPIYQMGR
Trigger: CCGCCCCATTTGATATATGGGCCTGAAATGTATGCCATCCCATCACCATCGGACTGGACTGTTCACAGCACTGGAGAGACAGAGGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367574.9
ENST00000486272.1
ENST00000489940.5
ENST00000537758.6
ENST00000683923.1
CDS GCA 90 bp AAGAGCCAGATCAAACCCTATAGTCAAACTAGAGGCAGTCAGTCCTaGAGACAGGCACAGACCAGAGTCGGGTACAACCCCTCAGCTAGA +
Preference number: 5 (lower is better)
Translates to: KSQIKPYSQTRGSQS*RQAQTRVGYNPSAR
Trigger: TCTAGCTGAGGGGTTGTACCCGACTCTGGTCTGTGCCTGTCTGCAGGACTGACTGCCTCTAGTTTGACTATAGGGTTTGATCTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 90 bp ACAGCGAGACAGCTGAACAGATGGACAGCCAGAGACAGTATGTGTTaGAGTGTCAGTCAAACAGAGTCACAGAGCCAAGCTTCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: TARQLNRWTARDSMC*SVSQTESQSQASSA
Trigger: GGCTGACGAAGCTTGGCTCTGTGACTCTGTTTGACTGACACTCCAACACATACTGTCTCTGGCTGTCCATCTGTTCAGCTGTCTCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 90 bp TTAGTCTTATGTGGCTCAAATGGATGCATGAGCTATCCTATAATATaGCATGGCCCTGCAGGCTCACGTGGCCAGACGGCCAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LVLCGSNGCMSYPII*HGPAGSRGQTAKAS
Trigger: GCTGGCTTTGGCCGTCTGGCCACGTGAGCCTGCAGGGCCATGCCATATTATAGGATAGCTCATGCATCCATTTGAGCCACATAAGACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS TCA 90 bp CCAGGACAGATAGATGCCCTTACTCCAGAGAGTCAGGCACATACATaGCACGAGACAGACAGACTTCGGGAAAATGCACGGTGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: PGQIDALTPESQAHT*HETDRLRENARWKE
Trigger: CTCTTTCCACCGTGCATTTTCCCGAAGTCTGTCTGTCTCGTGTCATGTATGTGCCTGACTCTCTGGAGTAAGGGCATCTATCTGTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS TCA 90 bp GTTCTGAAGTTAGGCCTGGGATTCATGCCTGGCTGCTTAGCTGGGTaGCACTGGTCAAGTCACTTGACCTTTTGGAGACTCATTCGGCAT +
Preference number: 5 (lower is better)
Translates to: VLKLGLGFMPGCLAG*HWSSHLTFWRLIRH
Trigger: ATGCCGAATGAGTCTCCAAAAGGTCAAGTGACTTGACCAGTGTCACCCAGCTAAGCAGCCAGGCATGAATCCCAGGCCTAACTTCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS TCA 90 bp CTTCGGTTAAAGGCCTCAAACATCACCTCACCAGGGAGGCTTCTCTaGCCTCCCTATTTCAAATGGAAATCACCCCCATACTTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: LRLKASNITSPGRLL*PPYFKWKSPPYFPS
Trigger: GGACGGGAAGTATGGGGGTGATTTCCATTTGAAATAGGGAGGTCAGAGAAGCCTCCCTGGTGAGGTGATGTTTGAGGCCTTTAACCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS GCA 90 bp CAGACATCCACCCTCAGGCAGTTAGTCTTATGTGGCTCAAATGGATaGATGAGCTATCCTATAATATGGCATGGCCCTGCAGGCTCACGT +
Preference number: 5 (lower is better)
Translates to: QTSTLRQLVLCGSNG*MSYPIIWHGPAGSR
Trigger: ACGTGAGCCTGCAGGGCCATGCCATATTATAGGATAGCTCATGCATCCATTTGAGCCACATAAGACTAACTGCCTGAGGGTGGATGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 90 bp ATAGGTTCTGAAGTTAGGCCTGGGATTCATGCCTGGCTGCTTAGCTaGGTGACACTGGTCAAGTCACTTGACCTTTTGGAGACTCATTCG +
Preference number: 5 (lower is better)
Translates to: IGSEVRPGIHAWLLS*VTLVKSLDLLETHS
Trigger: CGAATGAGTCTCCAAAAGGTCAAGTGACTTGACCAGTGTCACCCAGCTAAGCAGCCAGGCATGAATCCCAGGCCTAACTTCAGAACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 90 bp CACACAGACATCCACCCTCAGGCAGTTAGTCTTATGTGGCTCAAATaGATGCATGAGCTATCCTATAATATGGCATGGCCCTGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: HTDIHPQAVSLMWLK*MHELSYNMAWPCRL
Trigger: GAGCCTGCAGGGCCATGCCATATTATAGGATAGCTCATGCATCCATTTGAGCCACATAAGACTAACTGCCTGAGGGTGGATGTCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS-3UTR CAA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGTGTGCCCCTCGCATCTaGTGCCATGTCACGGTGTCT +
Preference number: 5 (lower is better)
Translates to: HENGVILCVCVCVCVEVLCAPRI*CHVTVS
Trigger: AGACACCGTGACATGGCACAAGATGCGAGGGGCACA...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000485288.7
CDS-3UTR CAA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLSTFSG*DTVRSH
Trigger: ATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGA...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CAA 90 bp CATGAAAATGGTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTGTTGTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: HENGVILCVCVCVCVEVLSTFSG*DTVRSH
Trigger: ATGGGACCTGACGGTGTCCAAGCCACTGAATGTGGA...CAACACCTCAACACACACACACACACACACACACAAAATCACACCATTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000472520.5
ENST00000485288.7
CDS-3UTR CAA 90 bp AATAACAAATTGTATATAAAAAGGAAGAAGGAAGGCGGGGAGGCCCTGGATCTCCTGAGCTCTGACCACTaGTGGACAGTGTATGCCATG +
Preference number: 5 (lower is better)
Translates to: NNKLYIKRKKEGGEALDLLSSDH*WTVYAM
Trigger: CATGGCATACACTGTCCACAAGTGGTCAGAGCTCAG...GAGATCCAGGGCCTCCCCGCCTTCCTTCTTCCTTTTTATATACAATTTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000472520.5
ENST00000485288.7
CDS CCA 90 bp AGTGGCAGGGCTTTGAGTCAGGGCTTTATAGTAATGAACGGGAGTTaGGTGGGAGACAAGTATGAAGTTGTCTGTACTTCTTATTGCAAA +
Preference number: 5 (lower is better)
Translates to: SGRALSQGFIVMNGS*VGDKYEVVCTSYCK
Trigger: TTTGCAATAAGAAGTACAGACAACTTCATACTTGTCTCCCACCCAACTCCCGTTCATTACTATAAAGCCCTGACTCAAAGCCCTGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS CCA 90 bp AACTCCACAGACAGGCATATGACATGCCACAGTCAGACCCATTCCTaGCCAAAGCTACAAAAAGTCAGAATCTTGAACACAGATTTATCT +
Preference number: 5 (lower is better)
Translates to: NSTDRHMTCHSQTHS*PKLQKVRILNTDLS
Trigger: AGATAAATCTGTGTTCAAGATTCTGACTTTTTGTAGCTTTGGCCAGGAATGGGTCTGACTGTGGCATGTCATATGCCTGTCTGTGGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS TCA 90 bp GCCAATAGACAAACATACATCATACATATCCCTAGACAGAGTCACTaGCAGGTTAAAGTCACCCAACCAACACATACTTGTCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: ANRQTYIIHIPRQSH*QVKVTQPTHTCHSP
Trigger: TGGAGAGTGACAAGTATGTGTTGGTTGGGTGACTTTAACCTGTCAGTGACTCTGTCTAGGGATATGTATGATGTATGTTTGTCTATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 72 bp CAGCGAGCCTCCAGAGGAGGCGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCTGGTCAAGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: QRASRGGGRRGR*QGAARSGQGPA
Trigger: AGCAGGGCCTTGACCAGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCCGCCTCCTCTGGAGGCTCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000491243.5
ENST00000528612.5
CDS CCA 72 bp TCACGAGCCTCCAGAGGAGGCGGCAGGCGAGGCAGATaGCAAGGAGCAGCCAGATCTGGTCAAGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: SRASRGGGRRGR*QGAARSGQGPA
Trigger: AGCAGGGCCTTGACCAGATCTGGCTGCTCCTTGCCATCTGCCTCGCCTGCCGCCTCCTCTGGAGGCTCGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472520.5
CDS TCA 72 bp GTCGGCAGAGGAACAGCACGAGGTAGCACAGGAGGCTaGGCAGCACGACCCAAACCATGTGCAGCGAGCCTC +
Preference number: 6 (lower is better)
Translates to: VGRGTARGSTGG*AARPKPCAASL
Trigger: GAGGCTCGCTGCACATGGTTTGGGTCGTGCTGCTCAGCCTCCTGTGCTACCTCGTGCTGTTCCTCTGCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000491243.5
ENST00000528612.5
CDS GCA 72 bp CAGATGGCAAGGAGCAGCCAGATCTGGTCAAGGCCCTaGTGGGCAGTAGGCAGGAGACAGCCTTGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: QMARSSQIWSRP*WAVGRRQPCSS
Trigger: GCTACTGCAAGGCTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGACCAGATCTGGCTGCTCCTTGCCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS GCA 72 bp GTGGTAGAGGCTGAAGAACCCGCCTGCCACGGTGCTTaGATGCTTCAGGTAGGATGGCAACCCGAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: VVEAEEPACHGA*MLQVGWQPEPP
Trigger: TGGAGGCTCGGGTTGCCATCCTACCTGAAGCATGCAAGCACCGTGGCAGGCGGGTTCTTCAGCCTCTACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000486272.1
ENST00000489940.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS GCA 72 bp CACCTCGCCCCGGTCCAGGTCGAAGCCCAGAGACACTaGCTTCATGGCCACAATCATCTGTGCCCCTATGTG +
Preference number: 6 (lower is better)
Translates to: HLAPVQVEAQRH*LHGHNHLCPYV
Trigger: CACATAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGACCGGGGCGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 72 bp CTGTCAAAGCAGGGACACAGAGGGAGCGGGTGTCCGTaGGGCAGACCTCGCTTAAAGGATGCACTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: LSKQGHRGSGCP*GRPRLKDALWH
Trigger: GTGCCAGAGTGCATCCTTTAAGCGAGGTCTGCCCCACGGACACCCGCTCCCTCTGTGTCCCTGCTTTGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000537758.6
CDS CAA 90 bp GCTCGCAGCCACCTTACCATGGTGCCCCTGGCTTTGCGTTTCTTGTaGCGAAGGAGGCGGTCACCGTTGAGGGGGATGAAGTACGGGAAG +
Preference number: 6 (lower is better)
Translates to: ARSHLTMVPLALRFL*RRRRSPLRGMKYGK
Trigger: CTTCCCGTACTTCATCCCCCTCAACGGTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTGGCTGCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS CAA 90 bp TTAAGGCTCGCACCCCCAGGCCCTGTGGGGGACAGATGGATATACTaGGCAACTGGACCTACTCACTGTGTCCCACCTCCTCCTGCACGG +
Preference number: 6 (lower is better)
Translates to: LRLAPPGPVGDRWIY*ATGPTHCVPPPPAR
Trigger: CCGTGCAGGAGGAGGTGGGACACAGTGAGTAGGTCCAGTTGCCAAGTATATCCATCTGTCCCCCACAGGGCCTGGGGGTGCGAGCCTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS TCA 72 bp TGCACGGTGGAAAGAGACACGGACCCAAGAGTAATGTaGGGTCTGCACGTCCAGTGGGGTGGGCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: CTVERDTDPRVM*GLHVQWGGQVR
Trigger: CCTCACCTGCCCACCCCACTGGACGTGCAGACCTCACATTACTCTTGGGTCCGTGTCTCTTTCCACCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS GCA 72 bp CAGCACTCTCGTAGGCTCGCAGCCACCTTACCATGGTaGCCCTGGCTTTGCGTTTCTTGTTGCGAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: QHSRRLAATLPW*PWLCVSCCEGG
Trigger: GCCTCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTGGCTGCGAGCCTACGAGAGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS GCA 72 bp GAGCGGGTGTCCGTGGGGCAGACCTCGCTTAAAGGATaGACTCTGGCACTCACATTTCAGTTTGGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ERVSVGQTSLKG*TLALTFQFGAA
Trigger: GGCAGCCCCAAACTGAAATGTGAGTGCCAGAGTGCATCCTTTAAGCGAGGTCTGCCCCACGGACACCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000537758.6
CDS CCA 72 bp TCTCGTAGGCTCGCAGCCACCTTACCATGGTGCCCCTaGCTTTGCGTTTCTTGTTGCGAAGGAGGCGGTCAC +
Preference number: 6 (lower is better)
Translates to: SRRLAATLPWCP*LCVSCCEGGGH
Trigger: GTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTGGCTGCGAGCCTACGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS CCA 72 bp GGAAGGAGACAGCACTCTCGTAGGCTCGCAGCCACCTaGCTTTGCGTTTCTTGTTGCGAAGGAGGCGGTCAC +
Preference number: 6 (lower is better)
Translates to: GRRQHSRRLAAT*LCVSCCEGGGH
Trigger: GTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGTGGCTGCGAGCCTACGAGAGTGCTGTCTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355961.8
CDS CCA 72 bp CTATCCTATAATATGGCATGGCCCTGCAGGCTCACGTaGCCAGACGGCCAAAGCCAGCCACCATCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: LSYNMAWPCRLT*PDGQSQPPSEA
Trigger: GGCCTCTGATGGTGGCTGGCTTTGGCCGTCTGGCCACGTGAGCCTGCAGGGCCATGCCATATTATAGGATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 72 bp GATGAGGGTACTGTTCACAGTGAGGGCATCCTGGGTTaGGGGAGGTGCGAGTCTCCAGGCAGAGGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: DEGTVHSEGILG*GRCESPGRGGR
Trigger: TCTTCCTCCTCTGCCTGGAGACTCGCACCTCCCCCAACCCAGGATGCCCTCACTGTGAACAGTACCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS CCA 72 bp CACCCCCAGGCCCTGTGGGGGACAGATGGATATACTTaGCAACTGGACCTACTCACTGTGTCCCACCTCCTC +
Preference number: 6 (lower is better)
Translates to: HPQALWGTDGYT*QLDLLTVSHLL
Trigger: GAGGAGGTGGGACACAGTGAGTAGGTCCAGTTGCCAAGTATATCCATCTGTCCCCCACAGGGCCTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS CAA 72 bp AGCCACCTTACCATGGTGCCCCTGGCTTTGCGTTTCTaGTTGCGAAGGAGGCGGTCACCGTTGAGGGGGATG +
Preference number: 6 (lower is better)
Translates to: SHLTMVPLALRF*LRRRRSPLRGM
Trigger: CATCCCCCTCAACGGTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS CAA 72 bp GCACCCCCAGGCCCTGTGGGGGACAGATGGATATACTaGGCAACTGGACCTACTCACTGTGTCCCACCTCCT +
Preference number: 6 (lower is better)
Translates to: APPGPVGDRWIY*ATGPTHCVPPP
Trigger: AGGAGGTGGGACACAGTGAGTAGGTCCAGTTGCCAAGTATATCCATCTGTCCCCCACAGGGCCTGGGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS GCA 72 bp CTGAGCCACCAACTGTGTGCATGTGGGTGTTCGGCATaGACACGCACAGCCTGTGACCTGGCAGGAAAGAAG +
Preference number: 6 (lower is better)
Translates to: LSHQLCACGCSA*TRTACDLAGKK
Trigger: CTTCTTTCCTGCCAGGTCACAGGCTGTGCGTGTGCATGCCGAACACCCACATGCACACAGTTGGTGGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485288.7
CDS GCA 72 bp CAGCCAGATCTGGTCAAGGCCATTTCAGTTTGGGGCTaGCCAGCCCATGTAGAGGCACGGTACTGGAGGACT +
Preference number: 6 (lower is better)
Translates to: QPDLVKAISVWG*PAHVEARYWRT
Trigger: AGTCCTCCAGTACCGTGCCTCTACATGGGCTGGGCAGCCCCAAACTGAAATGGCCTTGACCAGATCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486272.1
CDS CCA 72 bp GTGGCCATTGCAGACCCCCACGGATGGATGGCCAGATaGATAGATCTGTCAAAGCAGGGACACAGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: VAIADPHGWMAR*IDLSKQGHRGS
Trigger: GCTCCCTCTGTGTCCCTGCTTTGACAGATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGCAATGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000537758.6
CDS CCA 72 bp CTGTGCCCCTATGTGTGGTGCCCATGGTCAAGTGGATaGGCAGAGAGCAGATCAGCATGGCAAGGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: LCPYVWCPWSSG*AESRSAWQGGG
Trigger: ACCTCCTCCTTGCCATGCTGATCTGCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 72 bp CCACTCCACGTGCCCTCACACCTGCCCTCATTTACCTaGCTTTGCGTTTCTTGTTGCGAAGGAGGCGGTCAC +
Preference number: 6 (lower is better)
Translates to: PLHVPSHLPSFT*LCVSCCEGGGH
Trigger: GTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGTAAATGAGGGCAGGTGTGAGGGCACGTGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 72 bp CCACCATTGACCGAGGCAGCTCCACATTCAGTGGCTTaGACACCGTCAGGTCCCTGGGGGCAGAAGAGATAT +
Preference number: 6 (lower is better)
Translates to: PPLTEAAPHSVA*TPSGPWGQKRY
Trigger: ATATCTCTTCTGCCCCCAGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCTCGGTCAATGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682661.1
CDS CCA 72 bp AGGCCCTGTGGGGGACAGATGGATATACTTGGCAACTaGACCTACTCACTGTGTCCCACCTCCTCCTGCACG +
Preference number: 6 (lower is better)
Translates to: RPCGGQMDILGN*TYSLCPTSSCT
Trigger: CGTGCAGGAGGAGGTGGGACACAGTGAGTAGGTCCAGTTGCCAAGTATATCCATCTGTCCCCCACAGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS CCA 72 bp GGTCCCAACATGATACCCCACCACATGTCAGCATCCTaGGCCCCGCTCTGTAGACTCACCTTACCATGGTGC +
Preference number: 6 (lower is better)
Translates to: GPNMIPHHMSAS*APLCRLTLPWC
Trigger: GCACCATGGTAAGGTGAGTCTACAGAGCGGGGCCCAGGATGCTGACATGTGGTGGGGTATCATGTTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684722.1
CDS CAA 72 bp CACCTTACCATGGTGCCCCTGGCTTTGCGTTTCTTGTaGCGAAGGAGGCGGTCACCGTTGAGGGGGATGAAG +
Preference number: 6 (lower is better)
Translates to: HLTMVPLALRFL*RRRRSPLRGMK
Trigger: CTTCATCCCCCTCAACGGTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS CAA 72 bp CCACGTGCCCTCACACCTGCCCTCATTTACCTGGCTTaGCGTTTCTTGTTGCGAAGGAGGCGGTCACCGTTG +
Preference number: 6 (lower is better)
Translates to: PRALTPALIYLA*RFLLRRRRSPL
Trigger: CAACGGTGACCGCCTCCTTCGCAACAAGAAACGCAAAGCCAGGTAAATGAGGGCAGGTGTGAGGGCACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CAA 72 bp TCCACCATTGACCGAGGCAGCTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCTGGGGGCAGAAGAGATA +
Preference number: 6 (lower is better)
Translates to: STIDRGSSTFSG*DTVRSLGAEEI
Trigger: TATCTCTTCTGCCCCCAGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCTCGGTCAATGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682661.1
CDS TCA 72 bp TGTAGAGGCACGGTACTGGAGGACTGGGGGAAGGCGTaGGAAGTCAGGTACATCAGACTGAGCCACCAACTG +
Preference number: 6 (lower is better)
Translates to: CRGTVLEDWGKA*EVRYIRLSHQL
Trigger: CAGTTGGTGGCTCAGTCTGATGTACCTGACTTCTCACGCCTTCCCCCAGTCCTCCAGTACCGTGCCTCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000485288.7
ENST00000486272.1
ENST00000537758.6
ENST00000683923.1
CDS GCA 72 bp TCAAGGCCCTGCTGGGCAGTAGGCAGGAGACAGCCTTaGAGTAGCTGCTGGAAAAATTCCTGGCGGCTAAAG +
Preference number: 6 (lower is better)
Translates to: SRPCWAVGRRQP*SSCWKNSWRLK
Trigger: CTTTAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCCTACTGCCCAGCAGGGCCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS GCA 72 bp AGGATGCACTCTGGCACTCACATTTCAGTTTGGGGCTaGCCAGCCCATGTAGAGGCACGGTACTGGAGGACT +
Preference number: 6 (lower is better)
Translates to: RMHSGTHISVWG*PAHVEARYWRT
Trigger: AGTCCTCCAGTACCGTGCCTCTACATGGGCTGGGCAGCCCCAAACTGAAATGTGAGTGCCAGAGTGCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485288.7
ENST00000537758.6
CDS GCA 72 bp GCCCAGAGACACTGCCTTCATGGCCACAATCATCTGTaGCCCTATGTGTGGTGCCCATGGTCAAGTGGATGG +
Preference number: 6 (lower is better)
Translates to: AQRHCLHGHNHL*PYVWCPWSSGW
Trigger: CCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTGGCCATGAAGGCAGTGTCTCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS GCA 72 bp CACTCATGTCAGCCCCACTCCACGTGCCCTCACACCTaGCCTCATTTACCTGGCTTTGCGTTTCTTGTTGCG +
Preference number: 6 (lower is better)
Translates to: HSCQPHSTCPHT*PHLPGFAFLVA
Trigger: CGCAACAAGAAACGCAAAGCCAGGTAAATGAGGGCAGGTGTGAGGGCACGTGGAGTGGGGCTGACATGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS GCA 72 bp TGGATGCATGAGCTATCCTATAATATGGCATGGCCCTaGAGGCTCACGTGGCCAGACGGCCAAAGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: WMHELSYNMAWP*RLTWPDGQSQP
Trigger: TGGCTGGCTTTGGCCGTCTGGCCACGTGAGCCTGCAGGGCCATGCCATATTATAGGATAGCTCATGCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 72 bp AGACAGCACTCTCGTAGGCTCGCAGCCACCTTACCATaGTGCCCCTGGCTTTGCGTTTCTTGTTGCGAAGGA +
Preference number: 6 (lower is better)
Translates to: RQHSRRLAATLP*CPWLCVSCCEG
Trigger: TCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTGGCTGCGAGCCTACGAGAGTGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326194.11
CDS CCA 72 bp TGGCGGCTAAAGGTGGCCATTGCAGACCCCCACGGATaGATGGCCAGATGGATAGATCTGTCAAAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: WRLKVAIADPHG*MARWIDLSKQG
Trigger: TCCCTGCTTTGACAGATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGCCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470275.2
ENST00000485288.7
ENST00000537758.6
CDS CAA 90 bp GTGACAACTTCCACCATTGACCGAGGCAGCTCCACATTCAGTGGCTaGGACACCGTCAGGTCCCTGGGGGCAGAAGAGATATGCAAATCC +
Preference number: 6 (lower is better)
Translates to: VTTSTIDRGSSTFSG*DTVRSLGAEEICKS
Trigger: GGATTTGCATATCTCTTCTGCCCCCAGGGACCTGACGGTGTCCAAGCCACTGAATGTGGAGCTGCCTCGGTCAATGGTGGAAGTTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682661.1
CDS TCA 72 bp ACTGGGGGAAGGCGTGAGAAGTCAGGTACATCAGACTaGGCCACCAACTGTGTGCATGTGGGTGTTCGGCAT +
Preference number: 6 (lower is better)
Translates to: TGGRREKSGTSD*ATNCVHVGVRH
Trigger: ATGCCGAACACCCACATGCACACAGTTGGTGGCTCAGTCTGATGTACCTGACTTCTCACGCCTTCCCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000485288.7
ENST00000486272.1
ENST00000537758.6
ENST00000683923.1
CDS GCA 72 bp CTGCTGGAAAAATTCCTGGCGGCTAAAGGTGGCCATTaGAGACCCCCACGGATGGATGGCCAGATGGATAGA +
Preference number: 6 (lower is better)
Translates to: LLEKFLAAKGGH*RPPRMDGQMDR
Trigger: TCTATCCATCTGGCCATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS CCA 72 bp TGGGCAGTAGGCAGGAGACAGCCTTGCAGTAGCTGCTaGAAAAATTCCTGGCGGCTAAAGGTGGCCATTGCA +
Preference number: 6 (lower is better)
Translates to: WAVGRRQPCSSC*KNSWRLKVAIA
Trigger: TGCAATGGCCACCTTTAGCCGCCAGGAATTTTTCCAGCAGCTACTGCAAGGCTGTCTCCTGCCTACTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000326194.11
ENST00000355961.8
ENST00000359882.8
ENST00000361988.7
ENST00000367574.9
ENST00000470275.2
ENST00000472520.5
ENST00000485288.7
ENST00000489940.5
ENST00000491243.5
ENST00000528612.5
ENST00000537758.6
ENST00000682661.1
ENST00000683923.1
ENST00000684722.1
CDS CCA 72 bp TGCCTTCATGGCCACAATCATCTGTGCCCCTATGTGTaGTGCCCATGGTCAAGTGGATGGGCAGAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: CLHGHNHLCPYV*CPWSSGWAESR
Trigger: TCTGCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTGGCCATGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 72 bp GATGGGATGGCATACATTTCAGGCCCATATATCAAATaGGGCGGGCGACGGGAAGGGGAATCCCTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: DGMAYISGPYIK*GGRREGESLVS
Trigger: GGAAACCAGGGATTCCCCTTCCCGTCGCCCGCCCCATTTGATATATGGGCCTGAAATGTATGCCATCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486272.1
ENST00000489940.5
ENST00000537758.6
ENST00000683923.1
CDS CCA 72 bp AACGGATGCCAGCGAATAGAGGAGAGGTTATGGGGATaGCTCAGGCACCAAAAGAAGAAGGTGGGCACCCTG +
Preference number: 6 (lower is better)
Translates to: NGCQRIEERLWG*LRHQKKKVGTL
Trigger: CAGGGTGCCCACCTTCTTCTTTTGGTGCCTGAGCCATCCCCATAACCTCTCCTCTATTCGCTGGCATCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS CCA 72 bp TGGCGGCTAAAGGTGGCCATTGCAGACCCCCACGGATaGATGGCCAGATGGATAGATATTTCAGTTTGGGGC +
Preference number: 6 (lower is better)
Translates to: WRLKVAIADPHG*MARWIDISVWG
Trigger: GCCCCAAACTGAAATATCTATCCATCTGGCCATCCATCCGTGGGGGTCTGCAATGGCCACCTTTAGCCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683923.1
CDS GCA 72 bp CTTCATGGCCACAATCATCTGTGCCCCTATGTGTGGTaGCCATGGTCAAGTGGATGGGCAGAGAGCAGATCA +
Preference number: 6 (lower is better)
Translates to: LHGHNHLCPYVW*PWSSGWAESRS
Trigger: TGATCTGCTCTCTGCCCATCCACTTGACCATGGGCACCACACATAGGGGCACAGATGATTGTGGCCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CCA 72 bp CTCTGTCTAGTCATGGAGTTGACGGTCAGACACACTTaGACACACAGAACCCATTGGTCATGGGCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: LCLVMELTVRHT*THRTHWSWALP
Trigger: GGGCAGAGCCCATGACCAATGGGTTCTGTGTGTCCAAGTGTGTCTGACCGTCAACTCCATGACTAGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CAA 90 bp CAACCACAGTCTCTGTCTAGTCATGGAGTTGACGGTCAGACACACTaGGACACACAGAACCCATTGGTCATGGGCTCTGCCCCCACTCAT +
Preference number: 6 (lower is better)
Translates to: QPQSLSSHGVDGQTH*DTQNPLVMGSAPTH
Trigger: ATGAGTGGGGGCAGAGCCCATGACCAATGGGTTCTGTGTGTCCAAGTGTGTCTGACCGTCAACTCCATGACTAGACAGAGACTGTGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CAA 90 bp TTCGTCAGCCAGCCAGCCAACCACAGTCTCTGTCTAGTCATGGAGTaGACGGTCAGACACACTTGGACACACAGAACCCATTGGTCATGG +
Preference number: 6 (lower is better)
Translates to: FVSQPANHSLCLVME*TVRHTWTHRTHWSW
Trigger: CCATGACCAATGGGTTCTGTGTGTCCAAGTGTGTCTGACCGTCAACTCCATGACTAGACAGAGACTGTGGTTGGCTGGCTGGCTGACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS TCA 72 bp TTAGGCCTGGGATTCATGCCTGGCTGCTTAGCTGGGTaGCACTGGTCAAGTCACTTGACCTTTTGGAGACTC +
Preference number: 6 (lower is better)
Translates to: LGLGFMPGCLAG*HWSSHLTFWRL
Trigger: GAGTCTCCAAAAGGTCAAGTGACTTGACCAGTGTCACCCAGCTAAGCAGCCAGGCATGAATCCCAGGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS GCA 72 bp ATAGGCAGGTGGGCAAGGAAGCCCAGGACAGATAGATaGCCTTACTCCAGAGAGTCAGGCACATACATGACA +
Preference number: 6 (lower is better)
Translates to: IGRWARKPRTDR*PYSRESGTYMT
Trigger: TGTCATGTATGTGCCTGACTCTCTGGAGTAAGGGCATCTATCTGTCCTGGGCTTCCTTGCCCACCTGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS GCA 72 bp ATCAAACCCTATAGTCAAACTAGAGGCAGTCAGTCCTaGAGACAGGCACAGACCAGAGTCGGGTACAACCCC +
Preference number: 6 (lower is better)
Translates to: IKPYSQTRGSQS*RQAQTRVGYNP
Trigger: GGGGTTGTACCCGACTCTGGTCTGTGCCTGTCTGCAGGACTGACTGCCTCTAGTTTGACTATAGGGTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 72 bp AGGGCCATCAGCAGGATGAGAATACCCACAACCTGTTaGAGCCCCCAGGATAAAGTCCTTAGATGGCCTCAA +
Preference number: 6 (lower is better)
Translates to: RAISRMRIPTTC*SPQDKVLRWPQ
Trigger: TTGAGGCCATCTAAGGACTTTATCCTGGGGGCTCCAACAGGTTGTGGGTATTCTCATCCTGCTGATGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459953.1
CDS CCA 72 bp GAAGTTAGGCCTGGGATTCATGCCTGGCTGCTTAGCTaGGTGACACTGGTCAAGTCACTTGACCTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: EVRPGIHAWLLS*VTLVKSLDLLE
Trigger: CTCCAAAAGGTCAAGTGACTTGACCAGTGTCACCCAGCTAAGCAGCCAGGCATGAATCCCAGGCCTAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CAA 72 bp CAGCCAGCCAACCACAGTCTCTGTCTAGTCATGGAGTaGACGGTCAGACACACTTGGACACACAGAACCCAT +
Preference number: 6 (lower is better)
Translates to: QPANHSLCLVME*TVRHTWTHRTH
Trigger: ATGGGTTCTGTGTGTCCAAGTGTGTCTGACCGTCAACTCCATGACTAGACAGAGACTGTGGTTGGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CAA 90 bp GCCTGGCTGCTTAGCTGGGTGACACTGGTCAAGTCACTTGACCTTTaGGAGACTCATTCGGCATTAGACCTAATCAGCAGCCAGGGAGTA +
Preference number: 6 (lower is better)
Translates to: AWLLSWVTLVKSLDL*ETHSALDLISSQGV
Trigger: TACTCCCTGGCTGCTGATTAGGTCTAATGCCGAATGAGTCTCCAAAAGGTCAAGTGACTTGACCAGTGTCACCCAGCTAAGCAGCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS TCA 72 bp AGAGATATGCAAATCCATTTGGGATCTCAACTCATCTaGCCGCCACACTTCTGTCTTGGCCGTTCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: RDMQIHLGSQLI*PPHFCLGRSLP
Trigger: GGGGAGGGAACGGCCAAGACAGAAGTGTGGCGGTCAGATGAGTTGAGATCCCAAATGGATTTGCATATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682661.1
CDS CCA 72 bp CAGTGCTGTGAACAGTCCAGTCCGATGGTGATGGGATaGCATACATTTCAGGCCCATATATCAAATGGGGCG +
Preference number: 6 (lower is better)
Translates to: QCCEQSSPMVMG*HTFQAHISNGA
Trigger: CGCCCCATTTGATATATGGGCCTGAAATGTATGCCATCCCATCACCATCGGACTGGACTGTTCACAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367574.9
ENST00000486272.1
ENST00000489940.5
ENST00000537758.6
ENST00000683923.1
CDS CCA 72 bp TCAACTCCACGTTTCCAGTTCCTCAGGGCAAAAACCTaGGAATTACCCTTGATTTGCCCTCCCCAAACTCCC +
Preference number: 6 (lower is better)
Translates to: STPRFQFLRAKT*ELPLICPPQTP
Trigger: GGGAGTTTGGGGAGGGCAAATCAAGGGTAATTCCCAGGTTTTTGCCCTGAGGAACTGGAAACGTGGAGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459953.1
CDS TCA 72 bp ATAGATGCCCTTACTCCAGAGAGTCAGGCACATACATaGCACGAGACAGACAGACTTCGGGAAAATGCACGG +
Preference number: 6 (lower is better)
Translates to: IDALTPESQAHT*HETDRLRENAR
Trigger: CCGTGCATTTTCCCGAAGTCTGTCTGTCTCGTGTCATGTATGTGCCTGACTCTCTGGAGTAAGGGCATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS GCA 72 bp CCAGACACAAATCTTATCAGACTCCCAGCCTTGCAATaGTCTAACCTGACTCAGCGACTACAGGACAGCCAA +
Preference number: 6 (lower is better)
Translates to: PDTNLIRLPALQ*SNLTQRLQDSQ
Trigger: TTGGCTGTCCTGTAGTCGCTGAGTCAGGTTAGAGCATTGCAAGGCTGGGAGTCTGATAAGATTTGTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 72 bp CAGCTGAACAGATGGACAGCCAGAGACAGTATGTGTTaGAGTGTCAGTCAAACAGAGTCACAGAGCCAAGCT +
Preference number: 6 (lower is better)
Translates to: QLNRWTARDSMC*SVSQTESQSQA
Trigger: AGCTTGGCTCTGTGACTCTGTTTGACTGACACTCCAACACATACTGTCTCTGGCTGTCCATCTGTTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CAA 72 bp ACAGCTGAACAGATGGACAGCCAGAGACAGTATGTGTaGGAGTGTCAGTCAAACAGAGTCACAGAGCCAAGC +
Preference number: 6 (lower is better)
Translates to: TAEQMDSQRQYV*ECQSNRVTEPS
Trigger: GCTTGGCTCTGTGACTCTGTTTGACTGACACTCCAACACATACTGTCTCTGGCTGTCCATCTGTTCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS TCA 72 bp TGTCTCTCCAGTGCTGTGAACAGTCCAGTCCGATGGTaGTGGGATGGCATACATTTCAGGCCCATATATCAA +
Preference number: 6 (lower is better)
Translates to: CLSSAVNSPVRW*WDGIHFRPIYQ
Trigger: TTGATATATGGGCCTGAAATGTATGCCATCCCATCACCATCGGACTGGACTGTTCACAGCACTGGAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367574.9
ENST00000486272.1
ENST00000489940.5
ENST00000537758.6
ENST00000683923.1
CDS GCA 72 bp ACATACATGACACGAGACAGACAGACTTCGGGAAAATaGACGGTGGAAAGAGACACGGACCCAAGAGTAATG +
Preference number: 6 (lower is better)
Translates to: TYMTRDRQTSGK*TVERDTDPRVM
Trigger: CATTACTCTTGGGTCCGTGTCTCTTTCCACCGTGCATTTTCCCGAAGTCTGTCTGTCTCGTGTCATGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491243.5
CDS CAA 72 bp CTTAGCTGGGTGACACTGGTCAAGTCACTTGACCTTTaGGAGACTCATTCGGCATTAGACCTAATCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LSWVTLVKSLDL*ETHSALDLISS
Trigger: GCTGCTGATTAGGTCTAATGCCGAATGAGTCTCCAAAAGGTCAAGTGACTTGACCAGTGTCACCCAGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS GCA 72 bp ACCCTCAGGCAGTTAGTCTTATGTGGCTCAAATGGATaGATGAGCTATCCTATAATATGGCATGGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: TLRQLVLCGSNG*MSYPIIWHGPA
Trigger: TGCAGGGCCATGCCATATTATAGGATAGCTCATGCATCCATTTGAGCCACATAAGACTAACTGCCTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS GCA 72 bp GTTGTAATCAGACATGGTCAAAAACAGGCAGCATCCTaGGTTGGAAAAAGCATAGGTTCTGAAGTTAGGCCT +
Preference number: 6 (lower is better)
Translates to: VVIRHGQKQAAS*VGKSIGSEVRP
Trigger: AGGCCTAACTTCAGAACCTATGCTTTTTCCAACGCAGGATGCTGCCTGTTTTTGACCATGTCTGATTACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CCA 72 bp GCTTTGAGTCAGGGCTTTATAGTAATGAACGGGAGTTaGGTGGGAGACAAGTATGAAGTTGTCTGTACTTCT +
Preference number: 6 (lower is better)
Translates to: ALSQGFIVMNGS*VGDKYEVVCTS
Trigger: AGAAGTACAGACAACTTCATACTTGTCTCCCACCCAACTCCCGTTCATTACTATAAAGCCCTGACTCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683804.1
CDS CAA 90 bp CACAGTCAGACCCATTCCTGGCCAAAGCTACAAAAAGTCAGAATCTaGAACACAGATTTATCTTATCCAATGACAGCCACATACCCTATC +
Preference number: 6 (lower is better)
Translates to: HSQTHSWPKLQKVRI*NTDLSYPMTATYPI
Trigger: GATAGGGTATGTGGCTGTCATTGGATAAGATAAATCTGTGTTCAAGATTCTGACTTTTTGTAGCTTTGGCCAGGAATGGGTCTGACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS TCA 72 bp CAAACATACATCATACATATCCCTAGACAGAGTCACTaGCAGGTTAAAGTCACCCAACCAACACATACTTGT +
Preference number: 6 (lower is better)
Translates to: QTYIIHIPRQSH*QVKVTQPTHTC
Trigger: ACAAGTATGTGTTGGTTGGGTGACTTTAACCTGTCAGTGACTCTGTCTAGGGATATGTATGATGTATGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1
CDS CAA 72 bp ACCCATTCCTGGCCAAAGCTACAAAAAGTCAGAATCTaGAACACAGATTTATCTTATCCAATGACAGCCACA +
Preference number: 6 (lower is better)
Translates to: THSWPKLQKVRI*NTDLSYPMTAT
Trigger: TGTGGCTGTCATTGGATAAGATAAATCTGTGTTCAAGATTCTGACTTTTTGTAGCTTTGGCCAGGAATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682661.1
ENST00000684722.1