RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POR (Homo sapiens)

Ensembl gene IDs: ENSG00000127948

Ensembl transcript IDs: ENST00000394893.5, ENST00000412064.6, ENST00000412521.5, ENST00000414186.5, ENST00000418341.1, ENST00000421059.1, ENST00000426184.1, ENST00000432753.5, ENST00000439269.1, ENST00000439297.1, ENST00000439963.5, ENST00000447222.5, ENST00000448410.5, ENST00000449920.5, ENST00000453773.5, ENST00000454934.5, ENST00000460892.1, ENST00000461988.6, ENST00000471238.5, ENST00000475509.1, ENST00000487247.5, ENST00000495770.1, ENST00000496888.5

Found 841 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATaGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTGCTGCCAGGG +
Preference number: 1 (lower is better)
Translates to: EPFCAATEGQRPPEA*SPVPPCRPWAVLPG
Trigger: CCCTGGCAGCACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR GCA 90 bp TCCTTGCCCTCGCCGGAGGAGGAGGCCATCTTGCGCAGCAGCTCCTaGTCCGAGGGCTCCGAGGCGTACTGCGCCAGCTCGTACAGCACG +
Preference number: 1 (lower is better)
Translates to: SLPSPEEEAILRSSS*SEGSEAYCASSYST
Trigger: CGTGCTGTACGAGCTGGCGCAGTACGCCTCGGAGCCCTCGGAGCAGGAGCTGCTGCGCAAGATGGCCTCCTCCTCCGGCGAGGGCAAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR TCA 90 bp TGGCAGGCTGCTCAGGTCGGCCAGGTCATACTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTAGCGGTGGGCGTCCTTGGACAGGCG +
Preference number: 1 (lower is better)
Translates to: WQAAQVGQVILLRVR*HASHPVAVGVLGQA
Trigger: CGCCTGTCCAAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGCCGACCTGAGCAGCCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR GCA 90 bp GGCTGCTCAGGTCGGCCAGGTCATACTCCTCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGTGGGCGTCCTTGGACAGGCGGTTGG +
Preference number: 1 (lower is better)
Translates to: GCSGRPGHTPQGPLT*LASRSGGRPWTGGW
Trigger: CCAACCGCCTGTCCAAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGCCGACCTGAGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR GCA 90 bp GCCATCTTGCGCAGCAGCTCCTGCTCCGAGGGCTCCGAGGCGTACTaGGCCAGCTCGTACAGCACGTTGGTACGCGGCGGGTTGGTGATG +
Preference number: 1 (lower is better)
Translates to: AILRSSSCSEGSEAY*ASSYSTLVRGGLVM
Trigger: CATCACCAACCCGCCGCGTACCAACGTGCTGTACGAGCTGGCGCAGTACGCCTCGGAGCCCTCGGAGCAGGAGCTGCTGCGCAAGATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 90 bp CCCACCATGATGACAGGCGTGGTGGCCTTGAAGGGCAGGCGGAACTaGGACTTGCGCACGAACATGGGCACCAGCGCACGGCCGCCGTTC +
Preference number: 1 (lower is better)
Translates to: PTMMTGVVALKGRRN*DLRTNMGTSARPPF
Trigger: GAACGGCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGTCATCATGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR TCA 90 bp CGGCAGGCTCCTTGGCCCGCAGCCAGTTGGTGGCCACGCCCTTGTTaGTGCGGCCAGCCTTGGTCTCGTACTCCACAACCACCGCACAGA +
Preference number: 1 (lower is better)
Translates to: RQAPWPAASWWPRPC*CGQPWSRTPQPPHR
Trigger: TCTGTGCGGTGGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 90 bp GGACAGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTaGAGTCCCCAGGGAGGCACCGCAGGCCACCGGGAGCCCATAGCA +
Preference number: 1 (lower is better)
Translates to: GQGGGLEGCLSDTWI*SPQGGTAGHREPIA
Trigger: TGCTATGGGCTCCCGGTGGCCTGCGGTGCCTCCCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR TCA 90 bp CAGGGAGGCACCGCAGGCCACCGGGAGCCCATAGCAGTCTCTGGGTaGCTCACCGCGAACTTGACCCCAGAGAGATCCACGTCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: QGGTAGHREPIAVSG*LTANLTPERSTSVS
Trigger: GGAGACAGACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGGTGGCCTGCGGTGCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR GCA 90 bp TGCACCCCAGGCCCAGAGGAGTCTTTGTCACTGGGCCTGCGCCCATaGCAAGGCCAAGCCAAACACACCCAGGAGACTACGGGAGGGAGC +
Preference number: 1 (lower is better)
Translates to: CTPGPEESLSLGLRP*QGQAKHTQETTGGS
Trigger: GCTCCCTCCCGTAGTCTCCTGGGTGTGTTTGGCTTGGCCTTGGCATGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCCTGGGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR CCA 90 bp TCCCCAGGGAGGCACCGCAGGCCACCGGGAGCCCATAGCAGTCTCTaGGTGACTCACCGCGAACTTGACCCCAGAGAGATCCACGTCTGT +
Preference number: 1 (lower is better)
Translates to: SPGRHRRPPGAHSSL*VTHRELDPREIHVC
Trigger: ACAGACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGGTGGCCTGCGGTGCCTCCCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CCA 90 bp ACATGCCTCGCATCCCGTAGCGGTGGGCGTCCTTGGACAGGCGGTTaGCAAACTCCTCTGCAGTCCCCGTCTGGGAGCCGTAGAACACGA +
Preference number: 1 (lower is better)
Translates to: TCLASRSGGRPWTGG*QTPLQSPSGSRRTR
Trigger: TCGTGTTCTACGGCTCCCAGACGGGGACTGCAGAGGAGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCTACGGGATGCGAGGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR TCA 90 bp AGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: SSTRPGSSGPWSSVS*CSPPPARAPWPRAQ
Trigger: CTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
3UTR GCA 90 bp AGTCCTGGGCATTGTCGGTGGGGTCTCCCTCACCGTAGGTGGCCATaGAGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: SPGHCRWGLPHRRWP*RKPPGRCRSLAGCS
Trigger: TGAGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAGACCCCACCGACAATGCCCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CCA 90 bp CGTAGAAGTCCTGGGCATTGTCGGTGGGGTCTCCCTCACCGTAGGTaGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: RRSPGHCRWGLPHRR*PCRKPPGRCRSLAG
Trigger: GCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAGACCCCACCGACAATGCCCAGGACTTCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CCA 90 bp CGGCCCATCTCCCCCATGTACACCTTGGCCGCATCTATGTCGGTGTaGACCACAAGCTCGTACTGGCGAATGCTGGACTCCTCGCCAGTG +
Preference number: 1 (lower is better)
Translates to: RPISPMYTLAASMSV*TTSSYWRMLDSSPV
Trigger: CACTGGCGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGATGCGGCCAAGGTGTACATGGGGGAGATGGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 90 bp AGGGACATGACGACGTCCAGGTCGGCACCCAGGATTTTGCCCAGCTaGTTGACGAGAGCAGAGTCGTTGGCTGGGTACACAGCCACGTGG +
Preference number: 1 (lower is better)
Translates to: RDMTTSRSAPRILPS*LTRAESLAGYTATW
Trigger: CCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGACCTGGACGTCGTCATGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 90 bp TCCGAGATGTCCAATTCCAGGTGCATGAGGTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTGGTGACTGCAGCCAGGAACGGATTC +
Preference number: 1 (lower is better)
Translates to: SEMSNSRCMRWRSVP*FSFRLVVTAARNGF
Trigger: GAATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR GCA 90 bp GACCTTGTGGGACTGATTTTGGAGTCCGAGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTG +
Preference number: 1 (lower is better)
Translates to: DLVGLILESEMSNSR*MRWRSVPWFSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGTCCCACAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412064.6
3UTR CCA 90 bp GGACTGATTTTGGAGTCCGAGATGTCCAATTCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTGCA +
Preference number: 1 (lower is better)
Translates to: GLILESEMSNSRCMR*RSVPWFSFRLVVTA
Trigger: TGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412064.6
3UTR CCA 90 bp TACCTGATTTTGGAGTCCGAGATGTCCAATTCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTGCA +
Preference number: 1 (lower is better)
Translates to: YLILESEMSNSRCMR*RSVPWFSFRLVVTA
Trigger: TGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR GCA 90 bp CCAGATTCATACCTGATTTTGGAGTCCGAGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTG +
Preference number: 1 (lower is better)
Translates to: PDSYLILESEMSNSR*MRWRSVPWFSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGGTATGAATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 90 bp CTTTATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTaGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGAAAG +
Preference number: 1 (lower is better)
Translates to: LYSKGQRLFKIIYTH*KSRGGAGPSSAERK
Trigger: CTTTCTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CCA 90 bp GCCGCCGTTCTCCCCGGCAGGCTCCTTGGCCCGCAGCCAGTTGGTGGCCACGCCGGACCTCACCTGGCCTaGGGGCTGAGGAGGATGCAC +
Preference number: 2 (lower is better)
Translates to: AAVLPGRLLGPQPVGGHAGPHLA*GLRRMH
Trigger: GTGCATCCTCCTCAGCCCCCAGGCCAGGTGAGGTCC...GGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGAGAACGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CAA 90 bp GCACGGCCGCCGTTCTCCCCGGCAGGCTCCTTGGCCCGCAGCCAGTaGGTGGCCACGCCCTTGTTGATGCGGCCAGCCTTGGTCTCGTAC +
Preference number: 2 (lower is better)
Translates to: ARPPFSPAGSLARSQ*VATPLLMRPALVSY
Trigger: GTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGAGAACGGCGGCCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CAA 90 bp AACATGGGCACCAGCGCACGGCCGCCGTTCTCCCCGGCAGGCTCCTaGGCCCGCAGCCAGTTGGTGGCCACGCCCTTGTTGATGCGGCCA +
Preference number: 2 (lower is better)
Translates to: NMGTSARPPFSPAGS*ARSQLVATPLLMRP
Trigger: TGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGAGAACGGCGGCCGTGCGCTGGTGCCCATGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp GCCGCCGTTCTCCCCGGCAGGCTCCTTGGCCCGCAGCCAGTTGGTGGCCACGCCTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: AAVLPGRLLGPQPVGGHAWRSVP*FSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCA...GGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGAGAACGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR GCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGGGCCCTGGGCTGTGCTaGCAGGGGCCGGTGGACCTC +
Preference number: 2 (lower is better)
Translates to: AQLSREKEPFCAATEGQRGPGLC*QGPVDL
Trigger: GAGGTCCACCGGCCCCTGGCAGCACAGCCCAGGGCC...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR TCA 90 bp CTTGCGCACGAACATGGGCACCAGCGCACGGCCGCCGTTCTCCCCGGCAGGCTCCCAATTCCAGGTGCATaGGGTGGCGCTCGGTTCCCT +
Preference number: 2 (lower is better)
Translates to: LAHEHGHQRTAAVLPGRLPIPGA*GGARFP
Trigger: AGGGAACCGAGCGCCACCTCATGCACCTGGAATTGG...GAGCCTGCCGGGGAGAACGGCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR GCA 90 bp GATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: DVVHRLRVLHGPELSHDVSTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...GACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR GCA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGGCAGGCCCTGGGCTGTaGTGCCAGGGGCCGGTGGAC +
Preference number: 2 (lower is better)
Translates to: SAERKSPSVQPPRARGLQAGPGL*CQGPVD
Trigger: GTCCACCGGCCCCTGGCAGCACAGCCCAGGGCCTGC...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR GCA 90 bp GGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTTGCGCACGAACATGGGCTTGCGCAGCAGCTCCTaGTCCGAGGGCTCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: GVVALKGRRNWDLRTNMGLRSSS*SEGSEA
Trigger: CGCCTCGGAGCCCTCGGAGCAGGAGCTGCTGCGCAA...GCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CAA 90 bp CCGGCAGGCTCCTTGGCCCGCAGCCAGTTGGTGGCCACGCCCTTGTaGATGCGGCCAGCCTTGGTCTCGTACTCCACAACCACCGCACAG +
Preference number: 2 (lower is better)
Translates to: PAGSLARSQLVATPL*MRPALVSYSTTTAQ
Trigger: CTGTGCGGTGGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CAA 90 bp TCCCCGGCAGGCTCCTTGGCCCGCAGCCAGTTGGTGGCCACGCCCTaGTTGATGCGGCCAGCCTTGGTCTCGTACTCCACAACCACCGCA +
Preference number: 2 (lower is better)
Translates to: SPAGSLARSQLVATP*LMRPALVSYSTTTA
Trigger: TGCGGTGGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CAA 90 bp ATGATGACAGGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTaGCGCACGAACATGGGCACCAGCGCACGGCCGCCGTTCTCCCCG +
Preference number: 2 (lower is better)
Translates to: MMTGVVALKGRRNWD*RTNMGTSARPPFSP
Trigger: CGGGGAGAACGGCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGTCATCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp CGCACCGTCCCTGTGGAACTGCGCCAGCTCCTCCCGGTACAGGTAGTCCTCATCAGTCTGTGGGGTGGGTaGGGCAGGCAGGCCCCTAGC +
Preference number: 2 (lower is better)
Translates to: RTVPVELRQLLPVQVVLISLWGG*GRQAPS
Trigger: GCTAGGGGCCTGCCTGCCCCACCCACCCCACAGACT...GATGAGGACTACCTGTACCGGGAGGAGCTGGCGCAGTTCCACAGGGACGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp CTTGCGCACGAACATGGGCACCAGCGCACGGCCGCCGTTCTCCCCGGCAGGCTCTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LAHEHGHQRTAAVLPGRLWRMRR*SSSGPA
Trigger: TGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCA...GAGCCTGCCGGGGAGAACGGCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR TCA 90 bp GTACAGCTCCTTGCCCTCGCCGGAGGAGGAGGCCATCTTGCGCAGCAGCTCCTGTGTCCAGGTAGTAGGTaGGGGCCGTGCGGTAGGACG +
Preference number: 2 (lower is better)
Translates to: VQLLALAGGGGHLAQQLLCPGSR*GPCGRT
Trigger: CGTCCTACCGCACGGCCCTCACCTACTACCTGGACA...CAGGAGCTGCTGCGCAAGATGGCCTCCTCCTCCGGCGAGGGCAAGGAGCTGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR GCA 90 bp GGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: GRPLAPHVQGVAALGHQFSTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...AAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR CCA 90 bp TGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCAGGGGGTGCTGGGGGCTaGGCCAACTGTGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: WPRAQPRCRRRCSAHPWPGGAGG*ANCGRQ
Trigger: CTGCCTGCCACAGTTGGCCCAGCCCCCAGCACCCCC...TGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394893.5
3UTR-3UTR GCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTGGGCCTGCGCCCATaGCAAGGCCAAGCCAAACAC +
Preference number: 2 (lower is better)
Translates to: PSSAERKSPSVQPPRARGLGLRP*QGQAKH
Trigger: GTGTTTGGCTTGGCCTTGGCATGGGCGCAGGCCCAG...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CCA 90 bp CAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTGGGCTGGGCCAACTGTaGCAGGCAGGGCCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: QLSREKEPFCAATEGQRPGLGQL*QAGPCP
Trigger: AGGACAAGGCCCTGCCTGCCACAGTTGGCCCAGCCC...AGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394893.5
3UTR-3UTR CCA 90 bp GCAGGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTGTTCCGTGCATCCCTaGGCAGGAAGAGGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: AGRPLAPHVQGVAALGHQCSVHP*AGRGGA
Trigger: AGCACCCCCTCTTCCTGCCCAGGGATGCACGGAACA...CTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394893.5
3UTR-3UTR CCA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCCTGCGCGTGCTCCATaGCCCCGAGCTCAGCCACGA +
Preference number: 2 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGPARAP*PRAQPR
Trigger: TCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGG...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR CCA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGGGACCTCACCTGGCCTaGGGGCTGAGGAGGATGCAC +
Preference number: 2 (lower is better)
Translates to: SAERKSPSVQPPRARGLQGPHLA*GLRRMH
Trigger: GTGCATCCTCCTCAGCCCCCAGGCCAGGTGAGGTCC...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CCA 90 bp GTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTAGAATGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: VHRLRVLHGPELSHDVVEWRSVP*FSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCA...TTCTACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR GCA 90 bp CCGGGAGCCCATAGCAGTCTCTGGGTGACTCACCGCGAACTTGACCCCAGAGAGCCGGGACATCCTCTATaGGGTGACGCCAGCCGTCTG +
Preference number: 2 (lower is better)
Translates to: PGAHSSLWVTHRELDPREPGHPL*GDASRL
Trigger: CAGACGGCTGGCGTCACCGCATAGAGGATGTCCCGG...CTCTCTGGGGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR GCA 90 bp CCGGGAGCCCATAGCAGTCTCTGGGTGACTCACCGCGAACTTGACCCCAGAGAGGATGTTCCTCCCCTCTaGTCCTGGACAGGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: PGAHSSLWVTHRELDPREDVPPL*SWTGQG
Trigger: GCCCTGGCCTGTCCAGGAGCAGAGGGGAGGAACATC...CTCTCTGGGGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR GCA 90 bp CGGCCAGGTCATACTCCTCAGGGTCCGCTGACATGCCTCGCATCCCGTAGCGGTGTTGGCAAACTCCTCTaGAGTCCCCGTCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: RPGHTPQGPLTCLASRSGVGKLL*SPRLGA
Trigger: GGCTCCCAGACGGGGACTGCAGAGGAGTTTGCCAAC...ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR CCA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAAGGCCACGTTGAGCTaGGTGAGCGCACCGTCCCTG +
Preference number: 2 (lower is better)
Translates to: SAERKSPSVQPPRARGLQKATLS*VSAPSL
Trigger: CAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CAA 90 bp GCCCGCAGCCAGTTGGTGGCCACGCCCTTGTTGATGCGGCCAGCCTaGGTCTCGTACTCCACAACCACCGCACAGATGTGCACAGAGTTG +
Preference number: 2 (lower is better)
Translates to: ARSQLVATPLLMRPA*VSYSTTTAQMCTEL
Trigger: CAACTCTGTGCACATCTGTGCGGTGGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR TCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATGGGAGCCAGGAGAGCTaGTTACAGGCCGGAGTCTGT +
Preference number: 2 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHGSQES*LQAGVC
Trigger: ACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCC...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR TCA 90 bp CACGTCTGTCTCCTGCAGCCAGTCGTAGAAGTCCTGGGCATTGTCGGTGGGGTCCTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTA +
Preference number: 2 (lower is better)
Translates to: HVCLLQPVVEVLGIVGGVLLRVR*HASHPV
Trigger: TACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAG...GACCCCACCGACAATGCCCAGGACTTCTACGACTGGCTGCAGGAGACAGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR CCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCAGGAGTCTTTGTCACTaGGCCTGCGCCCATGCCAAG +
Preference number: 2 (lower is better)
Translates to: PSSAERKSPSVQPPRARGRSLCH*ACAHAK
Trigger: CTTGGCATGGGCGCAGGCCCAGTGACAAAGACTCCT...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR CAA 90 bp GACATGACGACGTCCAGGTCGGCACCCAGGATTTTGCCCAGCTGGTaGACGAGAGCAGAGTCGTTGGCTGGGTACACAGCCACGTGGTCC +
Preference number: 2 (lower is better)
Translates to: DMTTSRSAPRILPSW*TRAESLAGYTATWS
Trigger: GGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGACCTGGACGTCGTCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR GCA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCCTGGCCATGTTCCGTaGATCCCTGGGCAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGPGHVP*IPGQEE
Trigger: CTCTTCCTGCCCAGGGATGCACGGAACATGGCCAGG...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394893.5
3UTR-3UTR GCA 90 bp AGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGCGATCTCTGGCAGGCTaGTCAGGTCGGCCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: RVGVWRAAFQIHGSGVPRRSLAG*SGRPGH
Trigger: ATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCG...CCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR CCA 90 bp AGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGACCTGCGCGTGCTCCATaGCCCCGAGCTCAGCCACGA +
Preference number: 2 (lower is better)
Translates to: RRCSAHPWPCSVHPHRRRPARAP*PRAQPR
Trigger: TCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGG...TCTACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR CCA 90 bp GGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGGAAGCGGTGGGCGTCCTTaGACAGGCGGTTGGCAAACT +
Preference number: 2 (lower is better)
Translates to: GGGLEGCLSDTWIWSPQGSGGRP*TGGWQT
Trigger: AGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCT...TCCCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR CCA 90 bp GCCTTGAAGGGCAGGCGGAACTGGGACTTGCGCACGAACATGGGCACCAGCGCACCCCCATGTACACCTTaGCCGCATCTATGTCGGTGT +
Preference number: 2 (lower is better)
Translates to: ALKGRRNWDLRTNMGTSAPPCTP*PHLCRC
Trigger: ACACCGACATAGATGCGGCCAAGGTGTACATGGGGG...TGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp GCCCACCATGATGACAGGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTTTGCACAGAGTTGGGGTaGACCTTGGAGGATGAGGCG +
Preference number: 2 (lower is better)
Translates to: AHHDDRRGGLEGQAELGLCTELG*TLEDEA
Trigger: CGCCTCATCCTCCAAGGTCCACCCCAACTCTGTGCA...AAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGTCATCATGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR TCA 90 bp TGGCCATGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCAGCTTCCGGTTGGTGGTaGCTGCAGCCAGGAACGGAT +
Preference number: 2 (lower is better)
Translates to: WPCSVHPHRRRCGHRLRSASGWW*LQPGTD
Trigger: ATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGC...TGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR TCA 90 bp CCGGGAGCCCATAGCAGTCTCTGGGTGACTCACCGCGAACTTGACCCCAGAGAGACGGGAGAAGCTTCGTaGGTTAGAGGGAGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: PGAHSSLWVTHRELDPRETGEAS*VRGRVC
Trigger: ACAGACCCTCCCTCTAACTCACGAAGCTTCTCCCGT...CTCTCTGGGGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR TCA 90 bp GGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGGATAGCAGTCTCTGGGTaGCTCACCGCGAACTTGACC +
Preference number: 2 (lower is better)
Translates to: GWGSGGLPFRYMDLESPGIAVSG*LTANLT
Trigger: GGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTAT...CCCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR GCA 90 bp CAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCAGGTGCTCTCGGTCTTaGTTTAGCAGGTGCTGGACG +
Preference number: 2 (lower is better)
Translates to: QFLDVVHRLRVLHGPELSRCSRS*FSRCWT
Trigger: CGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCT...GCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR CCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGCCTGCGCGTGCTCCATaGCCCCGAGCTCAGCCACGA +
Preference number: 2 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEPARAP*PRAQPR
Trigger: TCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGG...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
3UTR-3UTR CCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCTCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRSRCMR*RSVPWF
Trigger: GAACCAGGGAACCGAGCGCCACCTCATGCACCTGGA...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR CCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCGTACTGGCGAATGCTaGACTCCTCGCCAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: TPRRLREGARRADYRPESRTGEC*TPRQWL
Trigger: AAGCCACTGGCGAGGAGTCCAGCATTCGCCAGTACG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR TCA 90 bp GCCCACCATGATGACAGGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTTTGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCG +
Preference number: 2 (lower is better)
Translates to: AHHDDRRGGLEGQAELGLWSSVS*CSPPPA
Trigger: CGCAGGCGGTGGACTACATCAAGAAACTGATGACCA...AAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGTCATCATGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR TCA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCCCAATTCCAGGTGCATaGGGTGGCGCTCGGTTCCCT +
Preference number: 2 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSPIPGA*GGARFP
Trigger: AGGGAACCGAGCGCCACCTCATGCACCTGGAATTGG...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR TCA 90 bp GTAGGTGGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGCTGCTTTGGTTAGGCAAGAATaGCTCCCAAGCGAGCCGGGC +
Preference number: 2 (lower is better)
Translates to: VGGHAENHQGVVDLWQAALVRQE*LPSEPG
Trigger: GCCCGGCTCGCTTGGGAGTCATTCTTGCCTAACCAA...AGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCCACCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR TCA 90 bp GGACAGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCAGCCGTAGAACACGATaGTGTTCCTCCCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GQGGGLEGCLSDTWIWSPSRRTR*CSSPLL
Trigger: GAGCAGAGGGGAGGAACATCATCGTGTTCTACGGCT...GGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR CCA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCTGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCC +
Preference number: 2 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGCSAHP*PCSVHP
Trigger: GGGATGCACGGAACATGGCCAGGGATGTGCAGAACA...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR CCA 90 bp TGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCAACTTCCTCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: CSVHPHRRRCGHRLRSTSSRCMR*RSVPWF
Trigger: GAACCAGGGAACCGAGCGCCACCTCATGCACCTGGA...GGAAGTTGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR CAA 90 bp AGGTTGTTCAGGGACATGACGACGTCCAGGTCGGCACCCAGGATTTaGCCCAGCTGGTTGACGAGAGCAGAGTCGTTGGCTGGGTACACA +
Preference number: 2 (lower is better)
Translates to: RLFRDMTTSRSAPRI*PSWLTRAESLAGYT
Trigger: TGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGACCTGGACGTCGTCATGTCCCTGAACAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR GCA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGAGGTGCTCTCGGTCTTaGTTTAGCAGGTGCTGGACG +
Preference number: 2 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVRCSRS*FSRCWT
Trigger: CGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCT...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR GCA 90 bp GACAGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCCAGCAACAGCAGAGCTaGTTCAGGGCTTTGGTTAGG +
Preference number: 2 (lower is better)
Translates to: DRVGVWRAAFQIHGSGVPQQQQS*FRALVR
Trigger: CCTAACCAAAGCCCTGAAGCAGCTCTGCTGTTGCTG...GGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR CCA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGTGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCC +
Preference number: 2 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVCSAHP*PCSVHP
Trigger: GGGATGCACGGAACATGGCCAGGGATGTGCAGAACA...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
3UTR CAA 90 bp TCGGCACCCAGGATTTTGCCCAGCTGGTTGACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACGTGGTCCCCAGATTCATACCTGATT +
Preference number: 2 (lower is better)
Translates to: SAPRILPSWLTRAES*AGYTATWSPDSYLI
Trigger: AATCAGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR TCA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGTGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCG +
Preference number: 2 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVWSSVS*CSPPPA
Trigger: CGCAGGCGGTGGACTACATCAAGAAACTGATGACCA...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR GCA 90 bp ACGAGAGCAGAGTCGTTGGCTGGGTACACAGCCACGTGGTCCCCAGATTCATACCCGGTTGGTGGTGACTaGAGCCAGGAACGGATTCTT +
Preference number: 2 (lower is better)
Translates to: TRAESLAGYTATWSPDSYPVGGD*SQERIL
Trigger: AAGAATCCGTTCCTGGCTGCAGTCACCACCAACCGG...GTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR GCA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTT +
Preference number: 2 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVMSNSR*MRWRSV
Trigger: AACCGAGCGCCACCTCATGCACCTGGAATTGGACAT...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR GCA 90 bp GCCACGCCCTTGTTGATGCGGCCAGCCTTGGTCTCGTACTCCACAACCACCGCAATCAACTTCCACAGGTaGTCTCGGTCTTGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: ATPLLMRPALVSYSTTTAINFHR*SRSCFS
Trigger: GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGAT...TGCGGTGGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGAGGAGTCTTTGTCACTaGGCCTGCGCCCATGCCAAG +
Preference number: 2 (lower is better)
Translates to: YLHSLEITWRGWAQLSRERSLCH*ACAHAK
Trigger: CTTGGCATGGGCGCAGGCCCAGTGACAAAGACTCCT...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CCA 90 bp GACAGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCGCTGCTTCAGGGCTTTaGTTAGGCAAGAATGACTCC +
Preference number: 2 (lower is better)
Translates to: DRVGVWRAAFQIHGSGVPAASGL*LGKNDS
Trigger: GGAGTCATTCTTGCCTAACCAAAGCCCTGAAGCAGC...GGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR-3UTR CCA 90 bp CACCGCCTTCGATCAACTTCCACAGGTGCTCTCGGTCTTGCTTTAGCAGGTGCTAAGGGCAGGCGGAACTaGGACTTGCGCACGAACATG +
Preference number: 2 (lower is better)
Translates to: HRLRSTSTGALGLALAGAKGRRN*DLRTNM
Trigger: CATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTT...AGCACCTGCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGATCGAAGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR GCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGGGGCACGGGAATGGGTaGTTCTTGTTGGACTCCTCA +
Preference number: 2 (lower is better)
Translates to: YLHSLEITWRGWAQLSREGHGNG*FLLDSS
Trigger: TGAGGAGTCCAACAAGAAGCACCCATTCCCGTGCCC...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGCGTAGGGCACGGGAATaGGTGCTTCTTGTTGGACTC +
Preference number: 2 (lower is better)
Translates to: YLHSLEITWRGWAQLSRERRARE*VLLVGL
Trigger: GAGTCCAACAAGAAGCACCCATTCCCGTGCCCTACG...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp CACCGCCTTCGATCAACTTCCACAGGTGCTCTCGGTCTTGCTTTAGCAGGTGCTAGTTGGGGTGGACCTTaGAGGATGAGGCGATGGAGT +
Preference number: 2 (lower is better)
Translates to: HRLRSTSTGALGLALAGASWGGP*RMRRWS
Trigger: ACTCCATCGCCTCATCCTCCAAGGTCCACCCCAACT...AGCACCTGCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGATCGAAGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR TCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCACCTGGCCTGGGGGCTaGGGAGGATGCACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGTWPGG*GGCTPG
Trigger: GCCTGGGGTGCATCCTCCTCAGCCCCCAGGCCAGGT...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR GCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPASTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
3UTR-3UTR GCA 90 bp ATGTGGGCACCGCCTTCGATCAACTTCCACAGGTGCTCTCGGTCTTGCTTTAGCATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTT +
Preference number: 2 (lower is better)
Translates to: MWAPPSINFHRCSRSCFSMSNSR*MRWRSV
Trigger: AACCGAGCGCCACCTCATGCACCTGGAATTGGACAT...GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGATCGAAGGCGGTGCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR CCA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGATTATTTACACTCACTaGAAATCACGTGGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: SAERKSPSVQPPRARGLQIIYTH*KSRGGA
Trigger: AGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CCA 90 bp CTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAACCACAAGCTCGTACTaGCGAATGCTGGACTCCTCG +
Preference number: 2 (lower is better)
Translates to: LAPHVQGVAALGHQFLDVTTSSY*RMLDSS
Trigger: CGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGT...TACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGAGGATTTTGCCCAGCTaGTTGACGAGAGCAGAGTCG +
Preference number: 2 (lower is better)
Translates to: YLHSLEITWRGWAQLSRERILPS*LTRAES
Trigger: CGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCT...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR TCA 90 bp TGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGATGTGGGCCCCAGATTCATACCTaGTTTTGGAGTCCGAGATGT +
Preference number: 2 (lower is better)
Translates to: CSAHPWPCSVHPHRRRCGPQIHT*FWSPRC
Trigger: ACATCTCGGACTCCAAAATCAGGTATGAATCTGGGG...CCCACATCTACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR GCA 90 bp GAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGATCAACTTCCACAGGTaGTCTCGGTCTTGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: ELSHDVVEGVLHIPGHVPINFHR*SRSCFS
Trigger: GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGAT...CGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR-3UTR CCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCAGGAGTCTTTGTCACTaGGCCTGCGCCCATGCCAAG +
Preference number: 2 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGRSLCH*ACAHAK
Trigger: CTTGGCATGGGCGCAGGCCCAGTGACAAAGACTCCT...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTGCATCTATGTCGGTGTaGACCACAAGCTCGTACTGG +
Preference number: 2 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPAASMSV*TTSSYW
Trigger: CCAGTACGAGCTTGTGGTCCACACCGACATAGATGC...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCATTATTTACACTCACTaGAAATCACGTGGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGIIYTH*KSRGGA
Trigger: AGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR GCA 72 bp TCGCCGGAGGAGGAGGCCATCTTGCGCAGCAGCTCCTaGTCCGAGGGCTCCGAGGCGTACTGCGCCAGCTCG +
Preference number: 3 (lower is better)
Translates to: SPEEEAILRSSS*SEGSEAYCASS
Trigger: CGAGCTGGCGCAGTACGCCTCGGAGCCCTCGGAGCAGGAGCTGCTGCGCAAGATGGCCTCCTCCTCCGGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CAA 90 bp CTTGCGCACGAACATGGGCACCAGCGCACGGCCGCCGTTCTCCCCGGCAGGCTCGGCCCAGAGGAGTCTTaGTCACTGGGCCTGCGCCCA +
Preference number: 3 (lower is better)
Translates to: LAHEHGHQRTAAVLPGRLGPEES*SLGLRP
Trigger: TGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCC...GAGCCTGCCGGGGAGAACGGCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 72 bp TTGTGGGACTGCTCCCGGGAGAAGGCCACGTTGAGCTaGGTGAGCGCACCGTCCCTGTGGAACTGCGCCAGC +
Preference number: 3 (lower is better)
Translates to: LWDCSREKATLS*VSAPSLWNCAS
Trigger: GCTGGCGCAGTTCCACAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTTCTCCCGGGAGCAGTCCCACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CAA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCGGCCCAGAGGAGTCTTaGTCACTGGGCCTGCGCCCA +
Preference number: 3 (lower is better)
Translates to: PSSAERKSPSVQPPRARGGPEES*SLGLRP
Trigger: TGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCC...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CAA 90 bp CCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGGTTCAGCTTCCGGTaGGTGGTGACTGCAGCCAGG +
Preference number: 3 (lower is better)
Translates to: PPPARAPWPRAQPRCRRRWFSFR*VVTAAR
Trigger: CCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCA...CCTTCTACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR TCA 72 bp GCTCAGGTCGGCCAGGTCATACTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTAGCGGTGGGCGTCCTT +
Preference number: 3 (lower is better)
Translates to: AQVGQVILLRVR*HASHPVAVGVL
Trigger: AAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGCCGACCTGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR GCA 72 bp GGTCGGCCAGGTCATACTCCTCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGTGGGCGTCCTTGGACA +
Preference number: 3 (lower is better)
Translates to: GRPGHTPQGPLT*LASRSGGRPWT
Trigger: TGTCCAAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGCCGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CCA 72 bp GGGACAGGGAGGGGACATTCTCGTAGTGCTGGGGTCTaGGGCAGAGGAGAGGGTCTCACAAGTGGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: GTGRGHSRSAGV*GRGEGLTSGLP
Trigger: GGGCAGGCCACTTGTGAGACCCTCTCCTCTGCCCCAGACCCCAGCACTACGAGAATGTCCCCTCCCTGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CCA 72 bp GCACAGAGTTGGGGTGGACCTTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCAGGCGCGGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: AQSWGGPWRMRR*SSSGPAGAAAA
Trigger: AGCTGCTGCCGCGCCTGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCAAGGTCCACCCCAACTCTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 72 bp ATGACAGGCGTGGTGGCCTTGAAGGGCAGGCGGAACTaGGACTTGCGCACGAACATGGGCACCAGCGCACGG +
Preference number: 3 (lower is better)
Translates to: MTGVVALKGRRN*DLRTNMGTSAR
Trigger: CCGTGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGTCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CAA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCCCAGAGGAGTCTTaGTCACTGGGCCTGCGCCCA +
Preference number: 3 (lower is better)
Translates to: QQRERALLCSHRGPEASRGPEES*SLGLRP
Trigger: TGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCC...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CAA 90 bp GTACAGCTCCTTGCCCTCGCCGGAGGAGGAGGCCATCTTGCGCAGCAGCTCCTGACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACG +
Preference number: 3 (lower is better)
Translates to: VQLLALAGGGGHLAQQLLTRAES*AGYTAT
Trigger: CGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT...CAGGAGCTGCTGCGCAAGATGGCCTCCTCCTCCGGCGAGGGCAAGGAGCTGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR TCA 72 bp CCTCTGCAGTCCCCGTCTGGGAGCCGTAGAACACGATaGTGTTCCTCCCCTCTGCTCCTGGACAGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: PLQSPSGSRRTR*CSSPLLLDRPG
Trigger: CCCTGGCCTGTCCAGGAGCAGAGGGGAGGAACATCATCGTGTTCTACGGCTCCCAGACGGGGACTGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR TCA 72 bp ACCGCAGGCCACCGGGAGCCCATAGCAGTCTCTGGGTaGCTCACCGCGAACTTGACCCCAGAGAGATCCACG +
Preference number: 3 (lower is better)
Translates to: TAGHREPIAVSG*LTANLTPERST
Trigger: CGTGGATCTCTCTGGGGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGGTGGCCTGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR TCA 72 bp CCTTGGCCCGCAGCCAGTTGGTGGCCACGCCCTTGTTaGTGCGGCCAGCCTTGGTCTCGTACTCCACAACCA +
Preference number: 3 (lower is better)
Translates to: PWPAASWWPRPC*CGQPWSRTPQP
Trigger: TGGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CAA 90 bp AAGGCCACGTTGAGCTGGGTGAGCGCACCGTCCCTGTGGAACTGCGCCAGCTCCTTGATGCGGCCAGCCTaGGTCTCGTACTCCACAACC +
Preference number: 3 (lower is better)
Translates to: KATLSWVSAPSLWNCASSLMRPA*VSYSTT
Trigger: GGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAA...GGAGCTGGCGCAGTTCCACAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR TCA 72 bp CGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCGCGTGCTCCATGGCCC +
Preference number: 3 (lower is better)
Translates to: RPGSSGPWSSVS*CSPPPARAPWP
Trigger: GGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
3UTR GCA 72 bp GGCCCAGAGGAGTCTTTGTCACTGGGCCTGCGCCCATaGCAAGGCCAAGCCAAACACACCCAGGAGACTACG +
Preference number: 3 (lower is better)
Translates to: GPEESLSLGLRP*QGQAKHTQETT
Trigger: CGTAGTCTCCTGGGTGTGTTTGGCTTGGCCTTGGCATGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CAA 90 bp CCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCCCCCATGTACACCTaGGCCGCATCTATGTCGGTG +
Preference number: 3 (lower is better)
Translates to: PWPCSVHPHRRRCGHRLRSPMYT*AASMSV
Trigger: CACCGACATAGATGCGGCCAAGGTGTACATGGGGGA...TCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACATGGCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CAA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGATCGGCACCCAGGATTTaGCCCAGCTGGTTGACGAGA +
Preference number: 3 (lower is better)
Translates to: QQRERALLCSHRGPEASRSAPRI*PSWLTR
Trigger: TCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGA...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CAA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGGACTCCTCATCCAGGTaGTTCAGGGACATGACGACG +
Preference number: 3 (lower is better)
Translates to: AQLSREKEPFCAATEGQRDSSSR*FRDMTT
Trigger: CGTCGTCATGTCCCTGAACAACCTGGATGAGGAGTC...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR GCA 72 bp AGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGCTaGTCAGGTCGGCCAGGTCATACTCCTCAGGGTCCG +
Preference number: 3 (lower is better)
Translates to: RKPPGRCRSLAG*SGRPGHTPQGP
Trigger: CGGACCCTGAGGAGTATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CCA 72 bp TCCAATTCCAGGTGCATGAGGTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTGGTGACTGCAGCCAGG +
Preference number: 3 (lower is better)
Translates to: SNSRCMRWRSVP*FSFRLVVTAAR
Trigger: CCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR CCA 72 bp GGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTaGCAGGCTGCTCAGGTCGGCCAGGTCATACTCCTC +
Preference number: 3 (lower is better)
Translates to: GHAENHQGVVDL*QAAQVGQVILL
Trigger: GAGGAGTATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CCA 72 bp CCTGGGCATTGTCGGTGGGGTCTCCCTCACCGTAGGTaGCCATGCAGAAAACCACCAGGGCGTTGTCGATCT +
Preference number: 3 (lower is better)
Translates to: PGHCRWGLPHRR*PCRKPPGRCRS
Trigger: AGATCGACAACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAGACCCCACCGACAATGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR TCA 72 bp CAGCAGAGCTGCTTCAGGGCTTTGGTTAGGCAAGAATaGCTCCCAAGCGAGCCGGGCTGCGTTCCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: QQSCFRALVRQE*LPSEPGCVPSP
Trigger: AGGAGAGGGAACGCAGCCCGGCTCGCTTGGGAGTCATTCTTGCCTAACCAAAGCCCTGAAGCAGCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR GCA 72 bp CATTGTCGGTGGGGTCTCCCTCACCGTAGGTGGCCATaGAGAAAACCACCAGGGCGTTGTCGATCTCTGGCA +
Preference number: 3 (lower is better)
Translates to: HCRWGLPHRRWP*RKPPGRCRSLA
Trigger: TGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAGACCCCACCGACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CCA 72 bp ACGACGTCCAGGTCGGCACCCAGGATTTTGCCCAGCTaGTTGACGAGAGCAGAGTCGTTGGCTGGGTACACA +
Preference number: 3 (lower is better)
Translates to: TTSRSAPRILPS*LTRAESLAGYT
Trigger: TGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGACCTGGACGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 72 bp TCCCCCATGTACACCTTGGCCGCATCTATGTCGGTGTaGACCACAAGCTCGTACTGGCGAATGCTGGACTCC +
Preference number: 3 (lower is better)
Translates to: SPMYTLAASMSV*TTSSYWRMLDS
Trigger: GGAGTCCAGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGATGCGGCCAAGGTGTACATGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 72 bp TTTGCCCAGCTGGTTGACGAGAGCAGAGTCGTTGGCTaGGTACACAGCCACGTGGTCCCCAGATTCATACCT +
Preference number: 3 (lower is better)
Translates to: FAQLVDESRVVG*VHSHVVPRFIP
Trigger: AGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR-3UTR CAA 90 bp CCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCTTGTGGGACTGATTTaGGAGTCCGAGATGTCCAAT +
Preference number: 3 (lower is better)
Translates to: PWPRAQPRCRRRCSAHPWLVGLI*ESEMSN
Trigger: ATTGGACATCTCGGACTCCAAAATCAGTCCCACAAG...CCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412064.6
3UTR TCA 72 bp TCTTGTTGGACTCCTCATCCAGGTTGTTCAGGGACATaGCGACGTCCAGGTCGGCACCCAGGATTTTGCCCA +
Preference number: 3 (lower is better)
Translates to: SCWTPHPGCSGT*RRPGRHPGFCP
Trigger: TGGGCAAAATCCTGGGTGCCGACCTGGACGTCGTCATGTCCCTGAACAACCTGGATGAGGAGTCCAACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR GCA 72 bp GGACTGATTTTGGAGTCCGAGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: GLILESEMSNSR*MRWRSVPWFSF
Trigger: GAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412064.6
3UTR CCA 72 bp CAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCCCACAGACGTAGATGT +
Preference number: 3 (lower is better)
Translates to: QPRCRRRCSAHP*PCSVHPHRRRC
Trigger: ACATCTACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR CCA 72 bp ACGAGAGCAGAGTCGTTGGCTGGGTACACAGCCACGTaGTCCCCAGATTCATACCTGATTTTGGAGTCCGAG +
Preference number: 3 (lower is better)
Translates to: TRAESLAGYTAT*SPDSYLILESE
Trigger: CTCGGACTCCAAAATCAGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR GCA 72 bp TACCTGATTTTGGAGTCCGAGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: YLILESEMSNSR*MRWRSVPWFSF
Trigger: GAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CCA 72 bp AAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTaGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: KGQRLFKIIYTH*KSRGGAGPSSA
Trigger: TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR-3UTR CAA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCGATTCATACCTGATTTaGGAGTCCGAGATGTCCAAT +
Preference number: 3 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGDSYLI*ESEMSN
Trigger: ATTGGACATCTCGGACTCCAAAATCAGGTATGAATC...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTCCCACCTCCTTGCCCTaGTGTCGCAGCCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PEASRGMEPGAPMQALGCPTSLP*CRSQAR
Trigger: GCGGGCCTGGCTGCGACAGCAGGGCAAGGAGGTGGG...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR CAA 72 bp ACCAGCGCACGGCCGCCGTTCTCCCCGGCAGGCTCCTaGGCCCGCAGCCAGTTGGTGGCCACGCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TSARPPFSPAGS*ARSQLVATPLL
Trigger: CAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGAGAACGGCGGCCGTGCGCTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CAA 72 bp GGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTaGCGCACGAACATGGGCACCAGCGCACGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GVVALKGRRNWD*RTNMGTSARPP
Trigger: CGGCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTTCTCCCCCACCTCCTTaGCCTGCTGTCGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PEASRGMEPGAPMQALGCSPPPP*PAVAAR
Trigger: CCTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGA...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGGGTCCGCTGACATGCCTCGCATCCCGTAGCGGTGGGCGTCCTTGGACAGGCGCACCCAATGCCCCCTaGAGCCGACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGPLTCLASRSGGRPWTGAPNAP*SRLGLG
Trigger: CCCCAGCCCCAGTCGGCTCCAGGGGGCATTGGGTGC...GCCTGTCCAAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: PEASRGMEPGAPMQALGCQGPLT*LASRSG
Trigger: ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTG...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GCCGCCGTTCTCCCCGGCAGGCTCCTTGGCCCGCAGCCAGTTGGTGGCCACGCCCACCGTAGGTGGCCATaGAGAAAACCACCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: AAVLPGRLLGPQPVGGHAHRRWP*RKPPGR
Trigger: ACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTG...GGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGAGAACGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGGCAGGCCCTGGGCTGTaGTGCCAGGGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGAGPGL*CQGPVD
Trigger: GTCCACCGGCCCCTGGCAGCACAGCCCAGGGCCTGC...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGGGGGTGCTGGGGGCTaGGCCAACTGTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: DVVHRLRVLHGPELSHDVGGAGG*ANCGRQ
Trigger: CTGCCTGCCACAGTTGGCCCAGCCCCCAGCACCCCC...GACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394893.5
3UTR CAA 72 bp CCGTTCTCCCCGGCAGGCTCCTTGGCCCGCAGCCAGTaGGTGGCCACGCCCTTGTTGATGCGGCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PFSPAGSLARSQ*VATPLLMRPAL
Trigger: CAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGAGAACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCGCTGGGCGCCGAGCTaGTCCAGCCGCTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVRWAPS*SSRLST
Trigger: CGTGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGAAGCCTATGAAGGGTaGCACCCCGGTGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: VHRLRVLHGPELSHDVVEEAYEG*HPGAGA
Trigger: GGCCCCGGCACCGGGGTGGCACCCTTCATAGGCTTC...TTCTACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp GGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTGGCCCTGGGCTGTGCTaGCAGGGGCCGGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: GRPLAPHVQGVAALGHQFGPGLC*QGPVDL
Trigger: GAGGTCCACCGGCCCCTGGCAGCACAGCCCAGGGCC...AAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp GTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTGCAGCCAGGAAGGCCCTGGGCTGTGCTaGCAGGGGCCGGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: VALGSLVQLPVGGDCSQEGPGLC*QGPVDL
Trigger: GAGGTCCACCGGCCCCTGGCAGCACAGCCCAGGGCC...TTCCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGGGCCCTGGGCTGTGCTaGCAGGGGCCGGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGGPGLC*QGPVDL
Trigger: GAGGTCCACCGGCCCCTGGCAGCACAGCCCAGGGCC...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCGCAGGCCCTGGGCTGTaGTGCCAGGGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: QFLDVVHRLRVLHGPELSAGPGL*CQGPVD
Trigger: GTCCACCGGCCCCTGGCAGCACAGCCCAGGGCCTGC...GCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGAGGCATGGAGCCCGGTaGCCCCATGCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGRHGAR*PHAGPG
Trigger: CCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCT...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCAGGCATGGAGCCCGGTaGCCCCATGCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSAERKSPSVQPPRARGRHGAR*PHAGPG
Trigger: CCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCT...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PEASRGMEPGAPMQALGCWRSVP*FSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCA...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGCACACAGGTGGTCGATaGGGGGCCGCAGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGHTGGR*GAAGTG
Trigger: GCCCGTCCCTGCGGCCCCCCATCGACCACCTGTGTG...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCACACAGGTGGTCGATaGGGGGCCGCAGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRHTGGR*GAAGTG
Trigger: GCCCGTCCCTGCGGCCCCCCATCGACCACCTGTGTG...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTTGCGCACGAACATGGGCAGTCTGTGGGGTGGGTaGGGCAGGCAGGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: GVVALKGRRNWDLRTNMGSLWGG*GRQAPS
Trigger: GCTAGGGGCCTGCCTGCCCCACCCACCCCACAGACT...GCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCAGGCGTGGTGGCCTTaGAGGGCAGGCGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVQAWWP*RAGGTG
Trigger: CCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GCCTTGAAGGGCAGGCGGAACTGGGACTTGCGCACGAACATGGGCACCAGCGCACAGGCGTGGTGGCCTTaGAGGGCAGGCGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: ALKGRRNWDLRTNMGTSAQAWWP*RAGGTG
Trigger: CCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTG...TGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp CAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTACCTGGCCTGGGGGCTaGGGAGGATGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QLSREKEPFCAATEGQRPTWPGG*GGCTPG
Trigger: GCCTGGGGTGCATCCTCCTCAGCCCCCAGGCCAGGT...AGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGACCTGGCCTGGGGGCTaGGGAGGATGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAERKSPSVQPPRARGLQTWPGG*GGCTPG
Trigger: GCCTGGGGTGCATCCTCCTCAGCCCCCAGGCCAGGT...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGCGCTGGGCGCCGAGCTaGTCCAGCCGCTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLRWAPS*SSRLST
Trigger: CGTGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCG...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGTTGCGCAGCAGCTCCTaGTCCGAGGGCTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRLRSSS*SEGSEA
Trigger: CGCCTCGGAGCCCTCGGAGCAGGAGCTGCTGCGCAA...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCCCACCTCCTTGCCCTaGTGTCGCAGCCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QFLDVVHRLRVLHGPELSPTSLP*CRSQAR
Trigger: GCGGGCCTGGCTGCGACAGCAGGGCAAGGAGGTGGG...GCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTCCCACCTCCTTGCCCTaGTGTCGCAGCCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGPTSLP*CRSQAR
Trigger: GCGGGCCTGGCTGCGACAGCAGGGCAAGGAGGTGGG...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PSSAERKSPSVQPPRARGSTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVSTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCCGCCTCGGACACGGTaGAGCTGGTGTCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: PSSAERKSPSVQPPRARGPPRTR*SWCPRG
Trigger: CCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGG...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CGGCCAGGTCATACTCCTCAGGGTCCGCTGACATGCCTCGCATCCCGTAGCGGTCCGCCTCGGACACGGTaGAGCTGGTGTCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: RPGHTPQGPLTCLASRSGPPRTR*SWCPRG
Trigger: CCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGG...ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCCGCCTCGGACACGGTaGAGCTGGTGTCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVPPRTR*SWCPRG
Trigger: CCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGAACTGGGACTTGCGCACGAACATGGGCACCAGCGCACGGCCGCCGTTCTCCCCCTGGGCATTGTCGGTaGGGTCTCCCTCACCGTAGG +
Preference number: 4 (lower is better)
Translates to: GTGTCARTWAPAHGRRSPPGHCR*GLPHRR
Trigger: CCTACGGTGAGGGAGACCCCACCGACAATGCCCAGG...GGGAGAACGGCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTAGCAGAGTCGTTGGCTaGGTACACAGCCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: PEASRGMEPGAPMQALGCSRVVG*VHSHVV
Trigger: GACCACGTGGCTGTGTACCCAGCCAACGACTCTGCT...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATCACACAGGTGGTCGATaGGGGGCCGCAGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHHTGGR*GAAGTG
Trigger: GCCCGTCCCTGCGGCCCCCCATCGACCACCTGTGTG...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGAGTCTGTGGGGTGGGTaGGGCAGGCAGGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGSLWGG*GRQAPS
Trigger: GCTAGGGGCCTGCCTGCCCCACCCACCCCACAGACT...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGAGGCCTCCAGAGGCATaGAGCCCGGTGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVRPPEA*SPVPPC
Trigger: GCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGGCACCCAATGCCCCCTaGAGCCGACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGAPNAP*SRLGLG
Trigger: CCCCAGCCCCAGTCGGCTCCAGGGGGCATTGGGTGC...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR TCA 90 bp GCTCCGAGGGCTCCGAGGCGTACTGCGCCAGCTCGTACAGCACGTTGGTACGCGGCTTCCGGTTGGTGGTaGCTGCAGCCAGGAACGGAT +
Preference number: 4 (lower is better)
Translates to: APRAPRRTAPARTARWYAASGWW*LQPGTD
Trigger: ATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGC...CGCGTACCAACGTGCTGTACGAGCTGGCGCAGTACGCCTCGGAGCCCTCGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp TGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTTGTCCAGGTAGTAGGTaGGGGCCGTGCGGTAGGACG +
Preference number: 4 (lower is better)
Translates to: CSPPPARAPWPRAQPRCRCPGSR*GPCGRT
Trigger: CGTCCTACCGCACGGCCCTCACCTACTACCTGGACA...ACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR TCA 90 bp GGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTTGCGCACGAACATGGGCTGTCCAGGTAGTAGGTaGGGGCCGTGCGGTAGGACG +
Preference number: 4 (lower is better)
Translates to: GVVALKGRRNWDLRTNMGCPGSR*GPCGRT
Trigger: CGTCCTACCGCACGGCCCTCACCTACTACCTGGACA...GCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp TGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTTGGCCACGCCCTTGTTaGTGCGGCCAGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: CSPPPARAPWPRAQPRCRWPRPC*CGQPWS
Trigger: AGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCA...ACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR TCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGACAGGCGTGGTGGCCTTaGAGGGCAGGCGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRQAWWP*RAGGTG
Trigger: CCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTG...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTCCGGTTGGTGGTGACTaGAGCCAGGAACGGATTCTT +
Preference number: 4 (lower is better)
Translates to: PEASRGMEPGAPMQALGCPVGGD*SQERIL
Trigger: AAGAATCCGTTCCTGGCTGCAGTCACCACCAACCGG...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTGGGCACGGGAATGGGTaGTTCTTGTTGGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: PEASRGMEPGAPMQALGCGHGNG*FLLDSS
Trigger: TGAGGAGTCCAACAAGAAGCACCCATTCCCGTGCCC...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTTTGCGCAGCAGCTCCTaGTCCGAGGGCTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: QLSREKEPFCAATEGQRPLRSSS*SEGSEA
Trigger: CGCCTCGGAGCCCTCGGAGCAGGAGCTGCTGCGCAA...AGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTGCGCAGCAGCTCCTaGTCCGAGGGCTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGLRSSS*SEGSEA
Trigger: CGCCTCGGAGCCCTCGGAGCAGGAGCTGCTGCGCAA...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGGAAGCCTATGAAGGGTaGCACCCCGGTGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGEAYEG*HPGAGA
Trigger: GGCCCCGGCACCGGGGTGGCACCCTTCATAGGCTTC...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATGAAGCCTATGAAGGGTaGCACCCCGGTGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHEAYEG*HPGAGA
Trigger: GGCCCCGGCACCGGGGTGGCACCCTTCATAGGCTTC...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCCCACCTCCTTGCCCTaGTGTCGCAGCCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESPTSLP*CRSQAR
Trigger: GCGGGCCTGGCTGCGACAGCAGGGCAAGGAGGTGGG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGTCTCCCCCACCTCCTTaGCCTGCTGTCGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVSPPPP*PAVAAR
Trigger: CCTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGA...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCTCCCCCACCTCCTTaGCCTGCTGTCGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEASPPPP*PAVAAR
Trigger: CCTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGA...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp ACTCCCAAGCGAGCCGGGCTGCGTTCCCTCTCCTGGCCACCGGGACATCCTCTACCGGGACATCCTCTATaGGGTGACGCCAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: TPKRAGLRSLSWPPGHPLPGHPL*GDASRL
Trigger: CAGACGGCTGGCGTCACCGCATAGAGGATGTCCCGG...TAGAGGATGTCCCGGTGGCCAGGAGAGGGAACGCAGCCCGGCTCGCTTGGGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCCGCCTCGGACACGGTaGAGCTGGTGTCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGPPRTR*SWCPRG
Trigger: CCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGG...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGCGTTGTCGATCTCTaGCAGGCTGCTCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: VHRLRVLHGPELSHDVVEGVVDL*QAAQVG
Trigger: GCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCC...TTCTACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCCCTGGGCATTGTCGGTaGGGTCTCCCTCACCGTAGG +
Preference number: 4 (lower is better)
Translates to: DVVHRLRVLHGPELSHDVPGHCR*GLPHRR
Trigger: CCTACGGTGAGGGAGACCCCACCGACAATGCCCAGG...GACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTACCACAAGCTCGTACTaGCGAATGCTGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: PEASRGMEPGAPMQALGCTTSSY*RMLDSS
Trigger: CGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGT...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTCACACAGGTGGTCGATaGGGGGCCGCAGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QAPSSTRPGSSGPWSSVSHTGGR*GAAGTG
Trigger: GCCCGTCCCTGCGGCCCCCCATCGACCACCTGTGTG...AGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCACTTGCGCACGAACATaGGCACCAGCGCACGGCCGC +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEATCART*APAHGR
Trigger: GCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGT...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGAGCGCACCGTCCCTGTaGAACTGCGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRSAPSL*NCASSS
Trigger: GGAGGAGCTGGCGCAGTTCCACAGGGACGGTGCGCT...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCCTGCGCGTGCTCCATaGCCCCGAGCTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: GRPLAPHVQGVAALGHQFPARAP*PRAQPR
Trigger: TCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGG...AAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTCCTGCGCGTGCTCCATaGCCCCGAGCTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGPARAP*PRAQPR
Trigger: TCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGG...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCAGTCTGTGGGGTGGGTaGGGCAGGCAGGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: QFLDVVHRLRVLHGPELSSLWGG*GRQAPS
Trigger: GCTAGGGGCCTGCCTGCCCCACCCACCCCACAGACT...GCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGAGTCTGTGGGGTGGGTaGGGCAGGCAGGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVSLWGG*GRQAPS
Trigger: GCTAGGGGCCTGCCTGCCCCACCCACCCCACAGACT...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAAGTCTGTGGGGTGGGTaGGGCAGGCAGGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRSLWGG*GRQAPS
Trigger: GCTAGGGGCCTGCCTGCCCCACCCACCCCACAGACT...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGAAGCCGGGGCAGGGCTaGGCAGGCTTCCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRKPGQG*AGFHLG
Trigger: TCCCAGATGGAAGCCTGCCCAGCCCTGCCCCGGCTT...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439269.1
3UTR CAA 72 bp GGCTCCTTGGCCCGCAGCCAGTTGGTGGCCACGCCCTaGTTGATGCGGCCAGCCTTGGTCTCGTACTCCACA +
Preference number: 4 (lower is better)
Translates to: GSLARSQLVATP*LMRPALVSYST
Trigger: TGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGCTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTA +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWLLRVR*HASHPV
Trigger: TACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAG...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGTCCAGGTAGTAGGTaGGGGCCGTGCGGTAGGACG +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGCPGSR*GPCGRT
Trigger: CGTCCTACCGCACGGCCCTCACCTACTACCTGGACA...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGTGTCCAGGTAGTAGGTaGGGGCCGTGCGGTAGGACG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVCPGSR*GPCGRT
Trigger: CGTCCTACCGCACGGCCCTCACCTACTACCTGGACA...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGCCACGCCCTTGTTaGTGCGGCCAGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGWPRPC*CGQPWS
Trigger: AGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCA...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCTGCCCCCTATTCCAGTaGCCCCACTCACTCACCCAC +
Preference number: 4 (lower is better)
Translates to: DVVHRLRVLHGPELSHDVCPLFQ*PHSLTH
Trigger: GTGGGTGAGTGAGTGGGGTCACTGGAATAGGGGGCA...GACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS-3UTR GCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCACCCCAGCTCAAAGATaGGCTGGGCGCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEATPAQR*AGRRAA
Trigger: AGCAGCTCGGCGCCCAGCGCATCTTTGAGCTGGGGT...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCAGGAGGAGGCCATCTTaGGCAGCAGCTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEARRRPS*AAAPAP
Trigger: CGGAGCAGGAGCTGCTGCGCAAGATGGCCTCCTCCT...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGAGGAGGAGGCCATCTTaGGCAGCAGCTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGRRRPS*AAAPAP
Trigger: CGGAGCAGGAGCTGCTGCGCAAGATGGCCTCCTCCT...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGTCAGGTACAGCTCCTTaGCCTCGCCGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWSGTAP*PRRRRR
Trigger: CCTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGA...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GGTGTGGACCACAAGCTCGTACTGGCGAATGCTGGACTCCTCGCCAGTGGCTTCGAAGCCTATGAAGGGTaGCACCCCGGTGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GVDHKLVLANAGLLASGFEAYEG*HPGAGA
Trigger: GGCCCCGGCACCGGGGTGGCACCCTTCATAGGCTTC...GAAGCCACTGGCGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGTCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCCCACCTCCTTGCCCTaGTGTCGCAGCCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVPTSLP*CRSQAR
Trigger: GCGGGCCTGGCTGCGACAGCAGGGCAAGGAGGTGGG...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATTCTCCCCCACCTCCTTaGCCTGCTGTCGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHSPPPP*PAVAAR
Trigger: CCTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGA...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESSTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGSTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGCTGGGCCTGCGCCCATaGCAAGGCCAAGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWLGLRP*QGQAKH
Trigger: GTGTTTGGCTTGGCCTTGGCATGGGCGCAGGCCCAG...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCCAGGATTTTGCCCAGCTGGTTGACGAGAGCAGAGTCGTTGGCTGGGTACACAGCAGGCCCTGGGCTGTaGTGCCAGGGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PRILPSWLTRAESLAGYTAGPGL*CQGPVD
Trigger: GTCCACCGGCCCCTGGCAGCACAGCCCAGGGCCTGC...TGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCAGGCATGGAGCCCGGTaGCCCCATGCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRRHGAR*PHAGPG
Trigger: CCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCT...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGTCTCCAGCACCCAATaGCCCCTGGAGCCGACTGGG +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVVSSTQ*PLEPTG
Trigger: CCCAGTCGGCTCCAGGGGGCATTGGGTGCTGGAGAC...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCCTGGGCATTGTCGGTaGGGTCTCCCTCACCGTAGG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVPGHCR*GLPHRR
Trigger: CCTACGGTGAGGGAGACCCCACCGACAATGCCCAGG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGGGCAGTCCTGCAGGATaGCCAGGATGTGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGGSPAG*PGCASG
Trigger: CCCGGAGGCACATCCTGGCCATCCTGCAGGACTGCC...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCCACACAGGTGGTCGATaGGGGGCCGCAGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRHTGGR*GAAGTG
Trigger: GCCCGTCCCTGCGGCCCCCCATCGACCACCTGTGTG...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTACTTGCGCACGAACATaGGCACCAGCGCACGGCCGC +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGTCART*APAHGR
Trigger: GCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGT...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTGCAGCCAGGAAAGCGCACCGTCCCTGTaGAACTGCGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VALGSLVQLPVGGDCSQESAPSL*NCASSS
Trigger: GGAGGAGCTGGCGCAGTTCCACAGGGACGGTGCGCT...TTCCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGAAGGCCACGTTGAGCTaGGTGAGCGCACCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVKATLS*VSAPSL
Trigger: CAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGGGACCTCACCTGGCCTaGGGGCTGAGGAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGGPHLA*GLRRMH
Trigger: GTGCATCCTCCTCAGCCCCCAGGCCAGGTGAGGTCC...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR CAA 72 bp TCCTTGGCCCGCAGCCAGTTGGTGGCCACGCCCTTGTaGATGCGGCCAGCCTTGGTCTCGTACTCCACAACC +
Preference number: 4 (lower is better)
Translates to: SLARSQLVATPL*MRPALVSYSTT
Trigger: GGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTCTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTA +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGLLRVR*HASHPV
Trigger: TACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAG...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTA +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGLLRVR*HASHPV
Trigger: TACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAG...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGGCTTCCGGTTGGTGGTaGCTGCAGCCAGGAACGGAT +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGASGWW*LQPGTD
Trigger: ATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGC...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGCCAATTCCAGGTGCATaGGGTGGCGCTCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGPIPGA*GGARFP
Trigger: AGGGAACCGAGCGCCACCTCATGCACCTGGAATTGG...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGGTTGTTCAGGGACATaGCGACGTCCAGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVGCSGT*RRPGRH
Trigger: GTGCCGACCTGGACGTCGTCATGTCCCTGAACAACC...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTTGCGCACGAACATGGGCGTGGACCTTGGAGGATaGGGCGATGGAGTAGTAGCG +
Preference number: 4 (lower is better)
Translates to: GVVALKGRRNWDLRTNMGVDLGG*GDGVVA
Trigger: CGCTACTACTCCATCGCCTCATCCTCCAAGGTCCAC...GCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGATGGCCACGCCCTTGTTaGTGCGGCCAGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRWPRPC*CGQPWS
Trigger: AGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCA...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGGGAGCCAGGAGAGCTaGTTACAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVGSQES*LQAGVC
Trigger: ACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCC...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCGGGAGCCAGGAGAGCTaGTTACAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEAGSQES*LQAGVC
Trigger: ACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCC...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CACCTTGGCCGCATCTATGTCGGTGTGGACCACAAGCTCGTACTGGCGAATGCTACCTGGCCTGGGGGCTaGGGAGGATGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HLGRIYVGVDHKLVLANATWPGG*GGCTPG
Trigger: GCCTGGGGTGCATCCTCCTCAGCCCCCAGGCCAGGT...AGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGATGCGGCCAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGGTTGGCAAACTCCTCTaGAGTCCCCGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWVGKLL*SPRLGA
Trigger: GGCTCCCAGACGGGGACTGCAGAGGAGTTTGCCAAC...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCGATCTCTGGCAGGCTaGTCAGGTCGGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVRSLAG*SGRPGH
Trigger: ATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTCACCGTAGGTGGCCATaGAGAAAACCACCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: CSPPPARAPWPRAQPRCRHRRWP*RKPPGR
Trigger: ACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTG...ACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGACCCCAGCTCAAAGATaGGCTGGGCGCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVTPAQR*AGRRAA
Trigger: AGCAGCTCGGCGCCCAGCGCATCTTTGAGCTGGGGT...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGACGGCCGGCCAGAACTaGTCTCGCCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWTAGQN*SRQVMK
Trigger: CTTCATCACCTGGCGAGAGCAGTTCTGGCCGGCCGT...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAAGGAGGAGGCCATCTTaGGCAGCAGCTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRRRRPS*AAAPAP
Trigger: CGGAGCAGGAGCTGCTGCGCAAGATGGCCTCCTCCT...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGTCAGGTACAGCTCCTTaGCCTCGCCGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVSGTAP*PRRRRR
Trigger: CCTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGA...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTCAGGTACAGCTCCTTaGCCTCGCCGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLSGTAP*PRRRRR
Trigger: CCTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGA...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp AAGGCCACGTTGAGCTGGGTGAGCGCACCGTCCCTGTGGAACTGCGCCAGCTCCACCACCGCACAGATGTaGACAGAGTTGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: KATLSWVSAPSLWNCASSTTAQM*TELGWT
Trigger: GGTCCACCCCAACTCTGTGCACATCTGTGCGGTGGT...GGAGCTGGCGCAGTTCCACAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGCTGGGCCTGCGCCCATaGCAAGGCCAAGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLLGLRP*QGQAKH
Trigger: GTGTTTGGCTTGGCCTTGGCATGGGCGCAGGCCCAG...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGGGATGTTCCTCCCCTCTaGTCCTGGACAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GWGSGGLPFRYMDLESPGDVPPL*SWTGQG
Trigger: GCCCTGGCCTGTCCAGGAGCAGAGGGGAGGAACATC...CCCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGCGGACACGGTGGAGCTaGTGTCCACGTGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVRTRWS*CPRGSL
Trigger: GAGACTCCCACGTGGACACCAGCTCCACCGTGTCCG...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TGGCCATGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCACCGCCTCGGACACGGTaGAGCTGGTGTCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: WPCSVHPHRRRCGHRLRSPPRTR*SWCPRG
Trigger: CCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGG...TGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACATGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGAGCGGTGGGCGTCCTTaGACAGGCGGTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWSGGRP*TGGWQT
Trigger: AGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCT...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGAGCGGTGGGCGTCCTTaGACAGGCGGTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVSGGRP*TGGWQT
Trigger: AGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGGGCGTTGTCGATCTCTaGCAGGCTGCTCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLGVVDL*QAAQVG
Trigger: GCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCC...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGCCTGGGCATTGTCGGTaGGGTCTCCCTCACCGTAGG +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVPGHCR*GLPHRR
Trigger: CCTACGGTGAGGGAGACCCCACCGACAATGCCCAGG...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGAGCTCAAAGATGCGCTaGGCGCCGAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGSSKMR*APSCSS
Trigger: GCTGGAGCAGCTCGGCGCCCAGCGCATCTTTGAGCT...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEAWRSVP*FSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCA...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGTCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRSRCMR*RSVPWF
Trigger: GAACCAGGGAACCGAGCGCCACCTCATGCACCTGGA...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AAGGCCACGTTGAGCTGGGTGAGCGCACCGTCCCTGTGGAACTGCGCCAGCTCCAGCAGAGTCGTTGGCTaGGTACACAGCCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: KATLSWVSAPSLWNCASSSRVVG*VHSHVV
Trigger: GACCACGTGGCTGTGTACCCAGCCAACGACTCTGCT...GGAGCTGGCGCAGTTCCACAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp TGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCAGGCAGTCCTGCAGGATaGCCAGGATGTGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WPRAQPRCRRRCSAHPWPGSPAG*PGCASG
Trigger: CCCGGAGGCACATCCTGGCCATCCTGCAGGACTGCC...TGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GCAGGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGRPLAPHVQGVAALGHQWRMRR*SSSGPA
Trigger: TGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCA...CTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp CCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGACTTGCGCACGAACATaGGCACCAGCGCACGGCCGC +
Preference number: 4 (lower is better)
Translates to: PWPRAQPRCRRRCSAHPWTCART*APAHGR
Trigger: GCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGT...CCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTACTTGCGCACGAACATaGGCACCAGCGCACGGCCGC +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESTCART*APAHGR
Trigger: GCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGT...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTACTTGCGCACGAACATaGGCACCAGCGCACGGCCGC +
Preference number: 4 (lower is better)
Translates to: QAPSSTRPGSSGPWSSVSTCART*APAHGR
Trigger: GCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGT...AGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTAGCGCACCGTCCCTGTaGAACTGCGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESSAPSL*NCASSS
Trigger: GGAGGAGCTGGCGCAGTTCCACAGGGACGGTGCGCT...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTAAGGCCACGTTGAGCTaGGTGAGCGCACCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGKATLS*VSAPSL
Trigger: CAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATAAGGCCACGTTGAGCTaGGTGAGCGCACCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHKATLS*VSAPSL
Trigger: CAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGTGTTCCGTGCATCCCTaGGCAGGAAGAGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRCSVHP*AGRGGA
Trigger: AGCACCCCCTCTTCCTGCCCAGGGATGCACGGAACA...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS-3UTR CCA 90 bp GTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCCTGCGCGTGCTCCATaGCCCCGAGCTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: VAALGHQFLDVVHRLRVLPARAP*PRAQPR
Trigger: TCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGG...GAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGTCACTGGAAATCACGTaGAGGGGCTGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVSLEIT*RGWAQL
Trigger: GAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGA...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCACTGGAAATCACGTaGAGGGGCTGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEASLEIT*RGWAQL
Trigger: GAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGA...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGACAAGTGGCCTGCCCTaGCTGCTGAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGTSGLP*LLRTGW
Trigger: CCACCCTGTCCTCAGCAGCCAGGGCAGGCCACTTGT...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCGTAGTGCTGGGGTCTaGGGCAGAGGAGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGRSAGV*GRGEGL
Trigger: GAGACCCTCTCCTCTGCCCCAGACCCCAGCACTACG...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR TCA 90 bp CCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTA +
Preference number: 4 (lower is better)
Translates to: PWPRAQPRCRRRCSAHPWLLRVR*HASHPV
Trigger: TACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAG...CCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGCTTCCGGTTGGTGGTaGCTGCAGCCAGGAACGGAT +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVASGWW*LQPGTD
Trigger: ATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGC...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATGCTTCCGGTTGGTGGTaGCTGCAGCCAGGAACGGAT +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHASGWW*LQPGTD
Trigger: ATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGC...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGACCAATTCCAGGTGCATaGGGTGGCGCTCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRPIPGA*GGARFP
Trigger: AGGGAACCGAGCGCCACCTCATGCACCTGGAATTGG...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGTTGTTCAGGGACATaGCGACGTCCAGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVGCSGT*RRPGRH
Trigger: GTGCCGACCTGGACGTCGTCATGTCCCTGAACAACC...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCGGTTGTTCAGGGACATaGCGACGTCCAGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: QFLDVVHRLRVLHGPELSGCSGT*RRPGRH
Trigger: GTGCCGACCTGGACGTCGTCATGTCCCTGAACAACC...GCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR TCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGTTGTTCAGGGACATaGCGACGTCCAGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRGCSGT*RRPGRH
Trigger: GTGCCGACCTGGACGTCGTCATGTCCCTGAACAACC...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCGTGGACCTTGGAGGATaGGGCGATGGAGTAGTAGCG +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEAVDLGG*GDGVVA
Trigger: CGCTACTACTCCATCGCCTCATCCTCCAAGGTCCAC...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CACCGCAGGCCACCGGGAGCCCATAGCAGTCTCTGGGTGACTCACCGCGAACTTGACTCACCGCGAACTTaGCCCCAGAGAGATCCACGT +
Preference number: 4 (lower is better)
Translates to: HRRPPGAHSSLWVTHRELDSPRT*PQRDPR
Trigger: ACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGAGTC...AAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGGTGGCCTGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp CACCGCAGGCCACCGGGAGCCCATAGCAGTCTCTGGGTGACTCACCGCGAACTTACATCCTCTATGCGGTaGCGCCAGCCGTCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: HRRPPGAHSSLWVTHRELTSSMR*RQPSAR
Trigger: TCTAGCAGACGGCTGGCGTCACCGCATAGAGGATGT...AAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGGTGGCCTGCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp CAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCGTTGGCAAACTCCTCTaGAGTCCCCGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QFLDVVHRLRVLHGPELSVGKLL*SPRLGA
Trigger: GGCTCCCAGACGGGGACTGCAGAGGAGTTTGCCAAC...GCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESQGPLT*LASRSG
Trigger: ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTCGATCTCTGGCAGGCTaGTCAGGTCGGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGRSLAG*SGRPGH
Trigger: ATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCG...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGCGCTGGGCGCCGAGCTaGTCCAGCCGCTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSRERWAPS*SSRLST
Trigger: CGTGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCG...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGACGGCCGGCCAGAACTaGTCTCGCCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLTAGQN*SRQVMK
Trigger: CTTCATCACCTGGCGAGAGCAGTTCTGGCCGGCCGT...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CAGGTAGTAGGTGAGGGCCGTGCGGTAGGACGTAGGGCACGGGAATGGGTGCTTACGGCCGGCCAGAACTaGTCTCGCCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: QVVGEGRAVGRRAREWVLTAGQN*SRQVMK
Trigger: CTTCATCACCTGGCGAGAGCAGTTCTGGCCGGCCGT...AAGCACCCATTCCCGTGCCCTACGTCCTACCGCACGGCCCTCACCTACTACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp CCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: PPPARAPWPRAQPRCRRRMSNSR*MRWRSV
Trigger: AACCGAGCGCCACCTCATGCACCTGGAATTGGACAT...CCTTCTACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCTCAGGTACAGCTCCTTaGCCTCGCCGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGSGTAP*PRRRRR
Trigger: CCTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGA...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGACCACCGCACAGATGTaGACAGAGTTGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWTTAQM*TELGWT
Trigger: GGTCCACCCCAACTCTGTGCACATCTGTGCGGTGGT...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCCTGGCCATGTTCCGTaGATCCCTGGGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGPGHVP*IPGQEE
Trigger: CTCTTCCTGCCCAGGGATGCACGGAACATGGCCAGG...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000447222.5
CDS-3UTR GCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGGGCCCTGGGCTGTGCTaGCAGGGGCCGGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEGPGLC*QGPVDL
Trigger: GAGGTCCACCGGCCCCTGGCAGCACAGCCCAGGGCC...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGGAAAGAGCCCTTCTGTaGAGCCACCGAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLERALL*SHRGPE
Trigger: CTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTC...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGTACAGCTCCTTGCCCTCGCCGGAGGAGGAGGCCATCTTGCGCAGCAGCTCCGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATC +
Preference number: 4 (lower is better)
Translates to: RYSSLPSPEEEAILRSSSELVST*ESPMLI
Trigger: GATCAACATGGGAGACTCCCACGTGGACACCAGCTC...GGAGCTGCTGCGCAAGATGGCCTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGAGCGGTGGGCGTCCTTaGACAGGCGGTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLSGGRP*TGGWQT
Trigger: AGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCT...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAAGCGGTGGGCGTCCTTaGACAGGCGGTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRSGGRP*TGGWQT
Trigger: AGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCT...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGACAGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCGGCGTTGTCGATCTCTaGCAGGCTGCTCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: GQGGGLEGCLSDTWIWSPGVVDL*QAAQVG
Trigger: GCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCC...GGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp GTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTAGAACTCCCTCACCGTAGGTaGCCATGCAGAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: VHRLRVLHGPELSHDVVELPHRR*PCRKPP
Trigger: TGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAG...TTCTACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp TGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCAAGCTCAAAGATGCGCTaGGCGCCGAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WPRAQPRCRRRCSAHPWPSSKMR*APSCSS
Trigger: GCTGGAGCAGCTCGGCGCCCAGCGCATCTTTGAGCT...TGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS-3UTR CCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGCGTACTGGCGAATGCTaGACTCCTCGCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGRTGEC*TPRQWL
Trigger: AAGCCACTGGCGAGGAGTCCAGCATTCGCCAGTACG...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GRPLAPHVQGVAALGHQFWRSVP*FSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCA...AAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGWRSVP*FSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCA...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QFLDVVHRLRVLHGPELSWRSVP*FSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCA...GCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGSRCMR*RSVPWF
Trigger: GAACCAGGGAACCGAGCGCCACCTCATGCACCTGGA...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGGTACACAGCCACGTaGTCCCCAGATTCATACCTG +
Preference number: 4 (lower is better)
Translates to: VHRLRVLHGPELSHDVVEGYTAT*SPDSYL
Trigger: CAGGTATGAATCTGGGGACCACGTGGCTGTGTACCC...TTCTACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGAGCCAGGCCCGCTCCTaGATGAAGCCTATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWSQARS*MKPMKG
Trigger: ACCCTTCATAGGCTTCATCCAGGAGCGGGCCTGGCT...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGAGCCAGGCCCGCTCCTaGATGAAGCCTATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVSQARS*MKPMKG
Trigger: ACCCTTCATAGGCTTCATCCAGGAGCGGGCCTGGCT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGAGCCAGGCCCGCTCCTaGATGAAGCCTATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRSQARS*MKPMKG
Trigger: ACCCTTCATAGGCTTCATCCAGGAGCGGGCCTGGCT...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCAGCGCACCGTCCCTGTaGAACTGCGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRSAPSL*NCASSS
Trigger: GGAGGAGCTGGCGCAGTTCCACAGGGACGGTGCGCT...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp TGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCCACGATGTCGTTGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: CSPPPARAPWPRAQPRCRCSAHP*PCSVHP
Trigger: GGGATGCACGGAACATGGCCAGGGATGTGCAGAACA...ACGACATCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGAGGAGTCTTTGTCACTaGGCCTGCGCCCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRRSLCH*ACAHAK
Trigger: CTTGGCATGGGCGCAGGCCCAGTGACAAAGACTCCT...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATAGGCCTCCAGAGGCATaGAGCCCGGTGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: PLAPHVQGVAALGHQFLDRPPEA*SPVPPC
Trigger: GCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCT...ATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGGCTCGTACTGGCGAATaGACAAGAAGCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRARTGE*TRSRGA
Trigger: GGCTCCCCTGCTTCTTGTCCATTCGCCAGTACGAGC...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS-3UTR CCA 90 bp GGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGGAACAAGTGGCCTGCCCTaGCTGCTGAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGLEGCLSDTWIWSPQGTSGLP*LLRTGW
Trigger: CCACCCTGTCCTCAGCAGCCAGGGCAGGCCACTTGT...TCCCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp GACAGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCCGTAGTGCTGGGGTCTaGGGCAGAGGAGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DRVGVWRAAFQIHGSGVPRSAGV*GRGEGL
Trigger: GAGACCCTCTCCTCTGCCCCAGACCCCAGCACTACG...GGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTTGTTCCGTGCATCCCTaGGCAGGAAGAGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESCSVHP*AGRGGA
Trigger: GGCACCCCCTCTTCCTGCCCAGGGATGCACGGAACA...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR TCA 90 bp GTAGGTGGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGCTGCTCTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTA +
Preference number: 4 (lower is better)
Translates to: VGGHAENHQGVVDLWQAALLRVR*HASHPV
Trigger: TACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAG...AGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCCACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCAAACACCGCGAACTTaGCCCCAGAGAGATCCACGT +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRQTPRT*PQRDPR
Trigger: ACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGTTTG...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCCAATTCCAGGTGCATaGGGTGGCGCTCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESPIPGA*GGARFP
Trigger: AGGGAACCGAGCGCCACCTCATGCACCTGGAATTGG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCTTTTGCCCAGCTGGTTaGCGAGAGCAGAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: PSSAERKSPSVQPPRARGFCPAG*REQSRW
Trigger: CCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAA...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGGGAGCCAGGAGAGCTaGTTACAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESGSQES*LQAGVC
Trigger: ACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCC...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGGACTCACCGCGAACTTaGCCCCAGAGAGATCCACGT +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGDSPRT*PQRDPR
Trigger: ACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGAGTC...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR TCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGATAGCAGTCTCTGGGTaGCTCACCGCGAACTTGACC +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVIAVSG*LTANLT
Trigger: GGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTAT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR GCA 90 bp AGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGGTTGGCAAACTCCTCTaGAGTCCCCGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RVGVWRAAFQIHGSGVPRVGKLL*SPRLGA
Trigger: GGCTCCCAGACGGGGACTGCAGAGGAGTTTGCCAAC...CCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp CACGTCTGTCTCCTGCAGCCAGTCGTAGAAGTCCTGGGCATTGTCGGTGGGGTCCGATCTCTGGCAGGCTaGTCAGGTCGGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HVCLLQPVVEVLGIVGGVRSLAG*SGRPGH
Trigger: ATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCG...GACCCCACCGACAATGCCCAGGACTTCTACGACTGGCTGCAGGAGACAGACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCGATCTCTGGCAGGCTaGTCAGGTCGGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGRSLAG*SGRPGH
Trigger: ATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCG...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGCACCGTAGGTGGCCATaGAGAAAACCACCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLHRRWP*RKPPGR
Trigger: ACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTG...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGCCGGTTGGTGGTGACTaGAGCCAGGAACGGATTCTT +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWPVGGD*SQERIL
Trigger: AAGAATCCGTTCCTGGCTGCAGTCACCACCAACCGG...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGCCGGTTGGTGGTGACTaGAGCCAGGAACGGATTCTT +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGPVGGD*SQERIL
Trigger: AAGAATCCGTTCCTGGCTGCAGTCACCACCAACCGG...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGAGGAGGAGGCCATCTTaGGCAGCAGCTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVRRRPS*AAAPAP
Trigger: CGGAGCAGGAGCTGCTGCGCAAGATGGCCTCCTCCT...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp GTCCAATTCCAGGTGCATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTAGGAGGAGGCCATCTTaGGCAGCAGCTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: VQFQVHEVALGSLVQLPVRRRPS*AAAPAP
Trigger: CGGAGCAGGAGCTGCTGCGCAAGATGGCCTCCTCCT...AACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCTCAGGTACAGCTCCTTaGCCTCGCCGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRSGTAP*PRRRRR
Trigger: CCTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGA...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTACCACCGCACAGATGTaGACAGAGTTGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGTTAQM*TELGWT
Trigger: GGTCCACCCCAACTCTGTGCACATCTGTGCGGTGGT...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGACCACCGCACAGATGTaGACAGAGTTGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: SAERKSPSVQPPRARGLQTTAQM*TELGWT
Trigger: GGTCCACCCCAACTCTGTGCACATCTGTGCGGTGGT...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGACCACCGCACAGATGTaGACAGAGTTGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLTTAQM*TELGWT
Trigger: GGTCCACCCCAACTCTGTGCACATCTGTGCGGTGGT...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGAGGTGCTCTCGGTCTTaGTTTAGCAGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRRCSRS*FSRCWT
Trigger: CGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCT...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCCTGGCCATGTTCCGTaGATCCCTGGGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESPGHVP*IPGQEE
Trigger: CTCTTCCTGCCCAGGGATGCACGGAACATGGCCAGG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000447222.5
CDS-3UTR GCA 90 bp ATGTGGGCACCGCCTTCGATCAACTTCCACAGGTGCTCTCGGTCTTGCTTTAGCTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: MWAPPSINFHRCSRSCFSSTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGATCGAAGGCGGTGCCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGGCATGGAGCCCGGTaGCCCCATGCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAERHGAR*PHAGPG
Trigger: CCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCT...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCGAAAGAGCCCTTCTGTaGAGCCACCGAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGERALL*SHRGPE
Trigger: CTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTC...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGGGGGTCTGGAGGGCTaGCTTTCAGATACATGGATC +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVGGLEG*LSDTWI
Trigger: GATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCC...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR GCA 90 bp CGCGAACTTGACCCCAGAGAGATCCACGTCTGTCTCCTGCAGCCAGTCGTAGAAGTCTCCAGCACCCAATaGCCCCTGGAGCCGACTGGG +
Preference number: 4 (lower is better)
Translates to: RELDPREIHVCLLQPVVEVSSTQ*PLEPTG
Trigger: CCCAGTCGGCTCCAGGGGGCATTGGGTGCTGGAGAC...TTCTACGACTGGCTGCAGGAGACAGACGTGGATCTCTCTGGGGTCAAGTTCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp CCTCACCGTAGGTGGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTGGCACGGACACGGTGGAGCTaGTGTCCACGTGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PHRRWPCRKPPGRCRSLARTRWS*CPRGSL
Trigger: GAGACTCCCACGTGGACACCAGCTCCACCGTGTCCG...TGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp GGACAGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCAGCGGTGGGCGTCCTTaGACAGGCGGTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: GQGGGLEGCLSDTWIWSPSGGRP*TGGWQT
Trigger: AGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCT...GGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCTCCCTCACCGTAGGTaGCCATGCAGAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVLPHRR*PCRKPP
Trigger: TGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCTGGGCATTGTCGGTaGGGTCTCCCTCACCGTAGG +
Preference number: 4 (lower is better)
Translates to: ALGHQFLDVVHRLRVLHGPGHCR*GLPHRR
Trigger: CCTACGGTGAGGGAGACCCCACCGACAATGCCCAGG...GCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATCGTACTGGCGAATGCTaGACTCCTCGCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHRTGEC*TPRQWL
Trigger: AAGCCACTGGCGAGGAGTCCAGCATTCGCCAGTACG...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGACCACAAGCTCGTACTaGCGAATGCTGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVTTSSY*RMLDSS
Trigger: CGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCCCCCCATGTACACCTTaGCCGCATCTATGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: PAQQRERALLCSHRGPEAPPCTP*PHLCRC
Trigger: ACACCGACATAGATGCGGCCAAGGTGTACATGGGGG...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGCCCCCATGTACACCTTaGCCGCATCTATGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGPPCTP*PHLCRC
Trigger: ACACCGACATAGATGCGGCCAAGGTGTACATGGGGG...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCCCCCATGTACACCTTaGCCGCATCTATGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: PSSAERKSPSVQPPRARGPPCTP*PHLCRC
Trigger: ACACCGACATAGATGCGGCCAAGGTGTACATGGGGG...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTTGGCGCTCGGTTCCCTaGTTCAGCTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESWRSVP*FSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCA...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGGGGTACACAGCCACGTaGTCCCCAGATTCATACCTG +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGGYTAT*SPDSYL
Trigger: CAGGTATGAATCTGGGGACCACGTGGCTGTGTACCC...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATAGCAGAGTCGTTGGCTaGGTACACAGCCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHSRVVG*VHSHVV
Trigger: GACCACGTGGCTGTGTACCCAGCCAACGACTCTGCT...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGAGCAGAGTCGTTGGCTaGGTACACAGCCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVSRVVG*VHSHVV
Trigger: GACCACGTGGCTGTGTACCCAGCCAACGACTCTGCT...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCGTAGGGCACGGGAATaGGTGCTTCTTGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVRRARE*VLLVGL
Trigger: GAGTCCAACAAGAAGCACCCATTCCCGTGCCCTACG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRPLAPHVQGVAALGHQFWRMRR*SSSGPA
Trigger: TGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCA...AAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGWRMRR*SSSGPA
Trigger: TGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCA...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGWRMRR*SSSGPA
Trigger: TGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCA...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGAGTTGGGGTGGACCTTaGAGGATGAGGCGATGGAGT +
Preference number: 4 (lower is better)
Translates to: AQLSREKEPFCAATEGQRSWGGP*RMRRWS
Trigger: ACTCCATCGCCTCATCCTCCAAGGTCCACCCCAACT...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGAGTTGGGGTGGACCTTaGAGGATGAGGCGATGGAGT +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVSWGGP*RMRRWS
Trigger: ACTCCATCGCCTCATCCTCCAAGGTCCACCCCAACT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGCACAGAGTTGGGGTaGACCTTGGAGGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLCTELG*TLEDEA
Trigger: CGCCTCATCCTCCAAGGTCCACCCCAACTCTGTGCA...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGAAGGGCAGGCGGAACTaGGACTTGCGCACGAACATG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGKGRRN*DLRTNM
Trigger: CATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTT...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGCSAHP*PCSVHP
Trigger: GGGATGCACGGAACATGGCCAGGGATGTGCAGAACA...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTACCTGCGCGTGCTCCATaGCCCCGAGCTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: VEGVLHIPGHVPCIPTDVPARAP*PRAQPR
Trigger: TCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGG...TACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp AGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGAAGTCTGTGGGGTGGGTaGGGCAGGCAGGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: RRCSAHPWPCSVHPHRRRSLWGG*GRQAPS
Trigger: GCTAGGGGCCTGCCTGCCCCACCCACCCCACAGACT...TCTACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAAGGAGTCTTTGTCACTaGGCCTGCGCCCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRRSLCH*ACAHAK
Trigger: CTTGGCATGGGCGCAGGCCCAGTGACAAAGACTCCT...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGGACCTCACCTGGCCTaGGGGCTGAGGAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSGPHLA*GLRRMH
Trigger: GTGCATCCTCCTCAGCCCCCAGGCCAGGTGAGGTCC...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGAGGCCTCCAGAGGCATaGAGCCCGGTGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSRERPPEA*SPVPPC
Trigger: GCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCT...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGACAGGGTGGGGGTCTaGAGGGCTGCCTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGDRVGV*RAAFQI
Trigger: TATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTC...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR CCA 90 bp TCGCATCCCGTAGCGGTGGGCGTCCTTGGACAGGCGGTTGGCAAACTCCTCTGCTTGATCATGAAACGCTaGCAGCCCGGCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SHPVAVGVLGQAVGKLLCLIMKR*QPGCSL
Trigger: CAGAGAGCAGCCGGGCTGCCAGCGTTTCATGATCAA...GCAGAGGAGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCTACGGGATGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCTTGATCATGAAACGCTaGCAGCCCGGCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PSSAERKSPSVQPPRARGLIMKR*QPGCSL
Trigger: CAGAGAGCAGCCGGGCTGCCAGCGTTTCATGATCAA...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461988.6
3UTR CAA 72 bp ACGTCCAGGTCGGCACCCAGGATTTTGCCCAGCTGGTaGACGAGAGCAGAGTCGTTGGCTGGGTACACAGCC +
Preference number: 4 (lower is better)
Translates to: TSRSAPRILPSW*TRAESLAGYTA
Trigger: GGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGACCTGGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
3UTR CAA 72 bp CAGTTGGTGGCCACGCCCTTGTTGATGCGGCCAGCCTaGGTCTCGTACTCCACAACCACCGCACAGATGTGC +
Preference number: 4 (lower is better)
Translates to: QLVATPLLMRPA*VSYSTTTAQMC
Trigger: GCACATCTGTGCGGTGGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp CCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTGCTTCCGGTTGGTGGTaGCTGCAGCCAGGAACGGAT +
Preference number: 4 (lower is better)
Translates to: PRAQPRCRRRCSAHPWPCASGWW*LQPGTD
Trigger: ATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGC...ACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp GCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCAATTCCAGGTGCATaGGGTGGCGCTCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: ALGHQFLDVVHRLRVLHGPIPGA*GGARFP
Trigger: AGGGAACCGAGCGCCACCTCATGCACCTGGAATTGG...GCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGACCTTGGAGGATaGGGCGATGGAGTAGTAGCG +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESVDLGG*GDGVVA
Trigger: CGCTACTACTCCATCGCCTCATCCTCCAAGGTCCAC...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGCAGGCGTGGTGGCCTTaGAGGGCAGGCGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEQAWWP*RAGGTG
Trigger: CCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTG...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TCCTGCTCCGAGGGCTCCGAGGCGTACTGCGCCAGCTCGTACAGCACGTTGGTATGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SCSEGSEAYCASSYSTLVWSSVS*CSPPPA
Trigger: CGCAGGCGGTGGACTACATCAAGAAACTGATGACCA...TACCAACGTGCTGTACGAGCTGGCGCAGTACGCCTCGGAGCCCTCGGAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp TTAGGCAAGAATGACTCCCAAGCGAGCCGGGCTGCGTTCCCTCTCCTGGCCACCATAGCAGTCTCTGGGTaGCTCACCGCGAACTTGACC +
Preference number: 4 (lower is better)
Translates to: LGKNDSQASRAAFPLLATIAVSG*LTANLT
Trigger: GGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTAT...GGTGGCCAGGAGAGGGAACGCAGCCCGGCTCGCTTGGGAGTCATTCTTGCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp CACGTCTGTCTCCTGCAGCCAGTCGTAGAAGTCCTGGGCATTGTCGGTGGGGTCTTGGTTAGGCAAGAATaGCTCCCAAGCGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HVCLLQPVVEVLGIVGGVLVRQE*LPSEPG
Trigger: GCCCGGCTCGCTTGGGAGTCATTCTTGCCTAACCAA...GACCCCACCGACAATGCCCAGGACTTCTACGACTGGCTGCAGGAGACAGACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp GAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: ELSHDVVEGVLHIPGHVPQGPLT*LASRSG
Trigger: ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTG...CGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSQGPLT*LASRSG
Trigger: ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTG...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp AGCAGAGCTGCTTCAGGGCTTTGGTTAGGCAAGAATGACTCCCAAGCGAGCCGGCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: SRAASGLWLGKNDSQASRQGPLT*LASRSG
Trigger: ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTG...CCGGCTCGCTTGGGAGTCATTCTTGCCTAACCAAAGCCCTGAAGCAGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp TGCATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTGCACACCGTAGGTGGCCATaGAGAAAACCACCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: CMRWRSVPWFSFRLVVTAHRRWP*RKPPGR
Trigger: ACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTG...TGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCACCGTAGGTGGCCATaGAGAAAACCACCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESHRRWP*RKPPGR
Trigger: ACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CACGTCTGTCTCCTGCAGCCAGTCGTAGAAGTCCTGGGCATTGTCGGTGGGGTCCACCGTAGGTGGCCATaGAGAAAACCACCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: HVCLLQPVVEVLGIVGGVHRRWP*RKPPGR
Trigger: ACGCCCTGGTGGTTTTCTGCATGGCCACCTACGGTG...GACCCCACCGACAATGCCCAGGACTTCTACGACTGGCTGCAGGAGACAGACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGCCGGTTGGTGGTGACTaGAGCCAGGAACGGATTCTT +
Preference number: 4 (lower is better)
Translates to: SAERKSPSVQPPRARGLQPVGGD*SQERIL
Trigger: AAGAATCCGTTCCTGGCTGCAGTCACCACCAACCGG...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCACGGGAATGGGTaGTTCTTGTTGGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVGHGNG*FLLDSS
Trigger: TGAGGAGTCCAACAAGAAGCACCCATTCCCGTGCCC...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGGGGCACGGGAATGGGTaGTTCTTGTTGGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: SAERKSPSVQPPRARGLQGHGNG*FLLDSS
Trigger: TGAGGAGTCCAACAAGAAGCACCCATTCCCGTGCCC...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTAGGTGCTCTCGGTCTTaGTTTAGCAGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGRCSRS*FSRCWT
Trigger: CGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCT...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GCCCACCATGATGACAGGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTTAGGTGCTCTCGGTCTTaGTTTAGCAGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: AHHDDRRGGLEGQAELGLRCSRS*FSRCWT
Trigger: CGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCT...AAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGTCATCATGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGCAGGCCCTGGGCTGTaGTGCCAGGGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSAAGPGL*CQGPVD
Trigger: GTCCACCGGCCCCTGGCAGCACAGCCCAGGGCCTGC...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CACCGCAGGCCACCGGGAGCCCATAGCAGTCTCTGGGTGACTCACCGCGAACTTCTAGACTTGATTACATaGCCATCGGGGCCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HRRPPGAHSSLWVTHRELLDLIT*PSGPRL
Trigger: AAGCCTCGGCCCCGATGGGCATGTAATCAAGTCTAG...AAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGGTGGCCTGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp GTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTGCAGCCAGGAAGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATC +
Preference number: 4 (lower is better)
Translates to: VALGSLVQLPVGGDCSQEELVST*ESPMLI
Trigger: GATCAACATGGGAGACTCCCACGTGGACACCAGCTC...TTCCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGGACACGGTGGAGCTaGTGTCCACGTGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VQGVAALGHQFLDVVHRLRTRWS*CPRGSL
Trigger: GAGACTCCCACGTGGACACCAGCTCCACCGTGTCCG...CAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp CCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTAGCGGTGGGCGTCCTTaGACAGGCGGTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: PRAQPRCRRRCSAHPWPCSGGRP*TGGWQT
Trigger: AGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCT...ACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCTCCCTCACCGTAGGTaGCCATGCAGAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGLPHRR*PCRKPP
Trigger: TGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAG...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGCAGAGCTGCTTCAGGGCTTTGGTTAGGCAAGAATGACTCCCAAGCGAGCCGGCCTGGGCATTGTCGGTaGGGTCTCCCTCACCGTAGG +
Preference number: 4 (lower is better)
Translates to: SRAASGLWLGKNDSQASRPGHCR*GLPHRR
Trigger: CCTACGGTGAGGGAGACCCCACCGACAATGCCCAGG...CCGGCTCGCTTGGGAGTCATTCTTGCCTAACCAAAGCCCTGAAGCAGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGACTCCTCGCCAGTaGCTTCCACCCCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLWTPRQ*LPPQSV
Trigger: AACACTTTGGGGTGGAAGCCACTGGCGAGGAGTCCA...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCACGTACTGGCGAATGCTaGACTCCTCGCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: WPRAQPRCRRRCSAHPWPRTGEC*TPRQWL
Trigger: AAGCCACTGGCGAGGAGTCCAGCATTCGCCAGTACG...TGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATACCACAAGCTCGTACTaGCGAATGCTGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHTTSSY*RMLDSS
Trigger: CGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGT...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGGGGTACACAGCCACGTaGTCCCCAGATTCATACCTG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGGYTAT*SPDSYL
Trigger: CAGGTATGAATCTGGGGACCACGTGGCTGTGTACCC...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCAGGATTTTGCCCAGCTaGTTGACGAGAGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: PSSAERKSPSVQPPRARGRILPS*LTRAES
Trigger: CGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCT...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGAGGATTTTGCCCAGCTaGTTGACGAGAGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVRILPS*LTRAES
Trigger: CGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCGTAGGGCACGGGAATaGGTGCTTCTTGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGRRARE*VLLVGL
Trigger: GAGTCCAACAAGAAGCACCCATTCCCGTGCCCTACG...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGACGTAGGGCACGGGAATaGGTGCTTCTTGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: QQRERALLCSHRGPEASRRRARE*VLLVGL
Trigger: GAGTCCAACAAGAAGCACCCATTCCCGTGCCCTACG...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCGGCAGTCCTGCAGGATaGCCAGGATGTGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SHDVVEGVLHIPGHVPCIGSPAG*PGCASG
Trigger: CCCGGAGGCACATCCTGGCCATCCTGCAGGACTGCC...GATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGCSAHP*PCSVHP
Trigger: GGGATGCACGGAACATGGCCAGGGATGTGCAGAACA...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCACCATGATGACAGGCGTGGTGGCCTTGAAGGGCAGGCGGAACTGGGACTTTGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: AHHDDRRGGLEGQAELGLCSAHP*PCSVHP
Trigger: GGGATGCACGGAACATGGCCAGGGATGTGCAGAACA...AAGTCCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGTCATCATGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATTGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHCSAHP*PCSVHP
Trigger: GGGATGCACGGAACATGGCCAGGGATGTGCAGAACA...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGTCACTGGAAATCACGTaGAGGGGCTGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVSLEIT*RGWAQL
Trigger: GAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGA...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGCTGCTCAGGTCGACAGGGTGGGGGTCTaGAGGGCTGCCTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: GHAENHQGVVDLWQAAQVDRVGV*RAAFQI
Trigger: TATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTC...GACCTGAGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp CTCCCAAGCGAGCCGGGCTGCGTTCCCTCTCCTGGCCACCGGGACATCCTCTATGCTGCTTCAGGGCTTTaGTTAGGCAAGAATGACTCC +
Preference number: 4 (lower is better)
Translates to: LPSEPGCVPSPGHRDILYAASGL*LGKNDS
Trigger: GGAGTCATTCTTGCCTAACCAAAGCCCTGAAGCAGC...ATAGAGGATGTCCCGGTGGCCAGGAGAGGGAACGCAGCCCGGCTCGCTTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
3UTR CAA 72 bp ATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTaGGTGGTGACTGCAGCCAGGAACGGATTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: MRWRSVPWFSFR*VVTAARNGFLA
Trigger: TGCCAAGAATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
3UTR CAA 72 bp AGGGACATGACGACGTCCAGGTCGGCACCCAGGATTTaGCCCAGCTGGTTGACGAGAGCAGAGTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RDMTTSRSAPRI*PSWLTRAESLA
Trigger: AGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGACCTGGACGTCGTCATGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGAGCCGTAGAACACGATaGTGTTCCTCCCCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWSRRTR*CSSPFS
Trigger: AGAAAACGGGGAGGAACATCATCGTGTTCTACGGCT...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGAGCCGTAGAACACGATaGTGTTCCTCCCCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: DYGREPGELITGRSLWGGSRRTR*CSSPFS
Trigger: AGAAAACGGGGAGGAACATCATCGTGTTCTACGGCT...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp ACAGGTGCTCTCGGTCTTGCTTTAGCAGGTGCTGGACGTAGACCTTGTGGGACTCTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTA +
Preference number: 4 (lower is better)
Translates to: TGALGLALAGAGRRPCGTLLRVR*HASHPV
Trigger: TACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAG...AGTCCCACAAGGTCTACGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp CCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGCTTCCGGTTGGTGGTaGCTGCAGCCAGGAACGGAT +
Preference number: 4 (lower is better)
Translates to: PLAPHVQGVAALGHQFLDASGWW*LQPGTD
Trigger: ATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGC...ATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTTTTTGCCCAGCTGGTTaGCGAGAGCAGAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESFCPAG*REQSRW
Trigger: CCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAA...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGWSSVS*CSPPPA
Trigger: CGCAGGCGGTGGACTACATCAAGAAACTGATGACCA...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGCTGCTCAGGTCACGGGAGAAGCTTCGTaGGTTAGAGGGAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GHAENHQGVVDLWQAAQVTGEAS*VRGRVC
Trigger: ACAGACCCTCCCTCTAACTCACGAAGCTTCTCCCGT...GACCTGAGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp GGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGCTGCTCAGGTCAGCCGTAGAACACGATaGTGTTCCTCCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GHAENHQGVVDLWQAAQVSRRTR*CSSPLL
Trigger: GAGCAGAGGGGAGGAACATCATCGTGTTCTACGGCT...GACCTGAGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp CGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTGTTGGCAAACTCCTCTaGAGTCCCCGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRRCSAHPWPCSVHPHRRVGKLL*SPRLGA
Trigger: GGCTCCCAGACGGGGACTGCAGAGGAGTTTGCCAAC...ACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp TGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGATGTGGGGTTGGCAAACTCCTCTaGAGTCCCCGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CSAHPWPCSVHPHRRRCGVGKLL*SPRLGA
Trigger: GGCTCCCAGACGGGGACTGCAGAGGAGTTTGCCAAC...CCCACATCTACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCCGATCTCTGGCAGGCTaGTCAGGTCGGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSRSLAG*SGRPGH
Trigger: ATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCG...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp CCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATACGGCCGGCCAGAACTaGTCTCGCCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: PLAPHVQGVAALGHQFLDTAGQN*SRQVMK
Trigger: CTTCATCACCTGGCGAGAGCAGTTCTGGCCGGCCGT...ATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVMSNSR*MRWRSV
Trigger: AACCGAGCGCCACCTCATGCACCTGGAATTGGACAT...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: QLSREKEPFCAATEGQRPMSNSR*MRWRSV
Trigger: AACCGAGCGCCACCTCATGCACCTGGAATTGGACAT...AGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHMSNSR*MRWRSV
Trigger: AACCGAGCGCCACCTCATGCACCTGGAATTGGACAT...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGTCTCCCCCACCTCCTTaGCCTGCTGTCGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAESPPPP*PAVAAR
Trigger: CCTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGA...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp AGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGGGGGGTCTGGAGGGCTaGCTTTCAGATACATGGATC +
Preference number: 4 (lower is better)
Translates to: RVGVWRAAFQIHGSGVPRGGLEG*LSDTWI
Trigger: GATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCC...CCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR GCA 90 bp CCGGGAGCCCATAGCAGTCTCTGGGTGACTCACCGCGAACTTGACCCCAGAGAGCAGCAACAGCAGAGCTaGTTCAGGGCTTTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: PGAHSSLWVTHRELDPREQQQQS*FRALVR
Trigger: CCTAACCAAAGCCCTGAAGCAGCTCTGCTGTTGCTG...CTCTCTGGGGTCAAGTTCGCGGTGAGTCACCCAGAGACTGCTATGGGCTCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp ATGTGGGCACCGCCTTCGATCAACTTCCACAGGTGCTCTCGGTCTTGCTTTAGCCGGACACGGTGGAGCTaGTGTCCACGTGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: MWAPPSINFHRCSRSCFSRTRWS*CPRGSL
Trigger: GAGACTCCCACGTGGACACCAGCTCCACCGTGTCCG...GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGATCGAAGGCGGTGCCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GACAGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCCTCCCTCACCGTAGGTaGCCATGCAGAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: DRVGVWRAAFQIHGSGVPLPHRR*PCRKPP
Trigger: TGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAG...GGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGAGCTCAAAGATGCGCTaGGCGCCGAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSRESSKMR*APSCSS
Trigger: GCTGGAGCAGCTCGGCGCCCAGCGCATCTTTGAGCT...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGGCATCTATGTCGGTGTaGACCACAAGCTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLASMSV*TTSSYW
Trigger: CCAGTACGAGCTTGTGGTCCACACCGACATAGATGC...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CACCTTGGCCGCATCTATGTCGGTGTGGACCACAAGCTCGTACTGGCGAATGCTTCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HLGRIYVGVDHKLVLANASRCMR*RSVPWF
Trigger: GAACCAGGGAACCGAGCGCCACCTCATGCACCTGGA...AGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGATGCGGCCAAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp CCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTAGCAGAGTCGTTGGCTaGGTACACAGCCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: PRAQPRCRRRCSAHPWPCSRVVG*VHSHVV
Trigger: GACCACGTGGCTGTGTACCCAGCCAACGACTCTGCT...ACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGAGGATTTTGCCCAGCTaGTTGACGAGAGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLRILPS*LTRAES
Trigger: CGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCT...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTAGGATTTTGCCCAGCTaGTTGACGAGAGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGRILPS*LTRAES
Trigger: CGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCT...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCTGCACAGAGTTGGGGTaGACCTTGGAGGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: ALGHQFLDVVHRLRVLHGCTELG*TLEDEA
Trigger: CGCCTCATCCTCCAAGGTCCACCCCAACTCTGTGCA...GCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAAAGGCCACGTTGAGCTaGGTGAGCGCACCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VEGVLHIPGHVPCIPTDVKATLS*VSAPSL
Trigger: CAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT...TACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp CTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGGGCTGGGCCAACTGTaGCAGGCAGGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LAPHVQGVAALGHQFLDVGLGQL*QAGPCP
Trigger: AGGACAAGGCCCTGCCTGCCACAGTTGGCCCAGCCC...TACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS-3UTR CCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCAGGAGTCTTTGTCACTaGGCCTGCGCCCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRRSLCH*ACAHAK
Trigger: CTTGGCATGGGCGCAGGCCCAGTGACAAAGACTCCT...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGGGACCTCACCTGGCCTaGGGGCTGAGGAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEGPHLA*GLRRMH
Trigger: GTGCATCCTCCTCAGCCCCCAGGCCAGGTGAGGTCC...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTTCGATCAACTTCCACAGGTGCTCTCGGTCTTGCTTTAGCAGGTGCTGGACGTGGACCTCACCTGGCCTaGGGGCTGAGGAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: LRSTSTGALGLALAGAGRGPHLA*GLRRMH
Trigger: GTGCATCCTCCTCAGCCCCCAGGCCAGGTGAGGTCC...ACGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGATCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp CGGCCAGGTCATACTCCTCAGGGTCCGCTGACATGCCTCGCATCCCGTAGCGGTTGCCTTTCAGATACATaGATCTGGAGTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPGHTPQGPLTCLASRSGCLSDT*IWSPQG
Trigger: TCCCTGGGGACTCCAGATCCATGTATCTGAAAGGCA...ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp GGAACTGGGACTTGCGCACGAACATGGGCACCAGCGCACGGCCGCCGTTCTCCCATGTCTGAATTTTGGTaGACTCGGGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GTGTCARTWAPAHGRRSPMSEFW*TRGLLL
Trigger: AAGAAGAAGTCCCCGAGTTCACCAAAATTCAGACAT...GGGAGAACGGCGGCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGCAAAGCTGCTCTCTCTaGCAGAGGAGGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLQSCSL*QRRSMS
Trigger: AGACATTGACCTCCTCTGTCAGAGAGAGCAGCTTTG...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GGCGTTGTCGATCTCTGGCAGGCTGCTCAGGTCGGCCAGGTCATACTCCTCAGGCAAAGCTGCTCTCTCTaGCAGAGGAGGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: GVVDLWQAAQVGQVILLRQSCSL*QRRSMS
Trigger: AGACATTGACCTCCTCTGTCAGAGAGAGCAGCTTTG...CCTGAGGAGTATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGAGCCGTAGAACACGATaGTGTTCCTCCCCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGSRRTR*CSSPFS
Trigger: AGAAAACGGGGAGGAACATCATCGTGTTCTACGGCT...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGACTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RRLREGARRADYRPESVGTCPWH*SARRSC
Trigger: ACAAGACCTACGAGCACTTCAATGCCATGGGCAAGT...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCAATTCCAGGTGCATaGGGTGGCGCTCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SHDVVEGVLHIPGHVPCIPIPGA*GGARFP
Trigger: AGGGAACCGAGCGCCACCTCATGCACCTGGAATTGG...GATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCCCCAGATTCATACCTaGTTTTGGAGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: PSSAERKSPSVQPPRARGPQIHT*FWSPRC
Trigger: ACATCTCGGACTCCAAAATCAGGTATGAATCTGGGG...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCTTTTGCCCAGCTGGTTaGCGAGAGCAGAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRFCPAG*REQSRW
Trigger: CCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAA...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR TCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGGGTTGTTCAGGGACATaGCGACGTCCAGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSREGCSGT*RRPGRH
Trigger: GTGCCGACCTGGACGTCGTCATGTCCCTGAACAACC...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGTGGCCACGCCCTTGTTaGTGCGGCCAGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEWPRPC*CGQPWS
Trigger: AGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCA...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCACAGGCGTGGTGGCCTTaGAGGGCAGGCGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSAQAWWP*RAGGTG
Trigger: CCCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTG...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTTGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESWSSVS*CSPPPA
Trigger: CGCAGGCGGTGGACTACATCAAGAAACTGATGACCA...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGGGGAGCCAGGAGAGCTaGTTACAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSREGSQES*LQAGVC
Trigger: ACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCC...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGAGGGAGCCAGGAGAGCTaGTTACAGGCCGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RRCSAHPWPCSVHPHRRRGSQES*LQAGVC
Trigger: ACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCC...TCTACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp GCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCGGGCACGGGAATGGGTaGTTCTTGTTGGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: ALGHQFLDVVHRLRVLHGGHGNG*FLLDSS
Trigger: TGAGGAGTCCAACAAGAAGCACCCATTCCCGTGCCC...GCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp GTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCAGGTGCTCTCGGTCTTaGTTTAGCAGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: VAALGHQFLDVVHRLRVLRCSRS*FSRCWT
Trigger: CGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCT...GAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp GTCGTTGGCTGGGTACACAGCCACGTGGTCCCCAGATTCATACCTGATTTTGGACTGGGCCTGCGCCCATaGCAAGGCCAAGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: VVGWVHSHVVPRFIPDFGLGLRP*QGQAKH
Trigger: GTGTTTGGCTTGGCCTTGGCATGGGCGCAGGCCCAG...TCCAAAATCAGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp GCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATC +
Preference number: 4 (lower is better)
Translates to: ALGHQFLDVVHRLRVLHGELVST*ESPMLI
Trigger: GATCAACATGGGAGACTCCCACGTGGACACCAGCTC...GCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GTAGGTGGCCATGCAGAAAACCACCAGGGCGTTGTCGATCTCTGGCAGGCTGCTGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATC +
Preference number: 4 (lower is better)
Translates to: VGGHAENHQGVVDLWQAAELVST*ESPMLI
Trigger: GATCAACATGGGAGACTCCCACGTGGACACCAGCTC...AGCAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTTCTGCATGGCCACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp GTCGTTGGCTGGGTACACAGCCACGTGGTCCCCAGATTCATACCTGATTTTGGAGGCGTTGTCGATCTCTaGCAGGCTGCTCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: VVGWVHSHVVPRFIPDFGGVVDL*QAAQVG
Trigger: GCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCC...TCCAAAATCAGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp CTATGTCGGTGTGGACCACAAGCTCGTACTGGCGAATGCTGGACTCCTCGCCAGTGGACTCCTCGCCAGTaGCTTCCACCCCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LCRCGPQARTGECWTPRQWTPRQ*LPPQSV
Trigger: AACACTTTGGGGTGGAAGCCACTGGCGAGGAGTCCA...CTGGCGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp GGGCACCGCCTTCGATCAACTTCCACAGGTGCTCTCGGTCTTGCTTTAGCAGGTCGTACTGGCGAATGCTaGACTCCTCGCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GHRLRSTSTGALGLALAGRTGEC*TPRQWL
Trigger: AAGCCACTGGCGAGGAGTCCAGCATTCGCCAGTACG...ACCTGCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGATCGAAGGCGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp CTATGTCGGTGTGGACCACAAGCTCGTACTGGCGAATGCTGGACTCCTCGCCAGCCCCCATGTACACCTTaGCCGCATCTATGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: LCRCGPQARTGECWTPRQPPCTP*PHLCRC
Trigger: ACACCGACATAGATGCGGCCAAGGTGTACATGGGGG...CTGGCGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp TGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCAAGGATTTTGCCCAGCTaGTTGACGAGAGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: WPRAQPRCRRRCSAHPWPRILPS*LTRAES
Trigger: CGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCT...TGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GCTCCTCCCGGTACAGGTAGTCCTCATCCGAGCGGCGGCAGCCGTAGTACAGCAATGGGTGCTTCTTGTTaGACTCCTCATCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: APPGTGSPHPSGGSRSTAMGASC*TPHPGC
Trigger: ACAACCTGGATGAGGAGTCCAACAAGAAGCACCCAT...TGCTGTACTACGGCTGCCGCCGCTCGGATGAGGACTACCTGTACCGGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp GAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGAAGGGCAGGCGGAACTaGGACTTGCGCACGAACATG +
Preference number: 4 (lower is better)
Translates to: ELSHDVVEGVLHIPGHVPKGRRN*DLRTNM
Trigger: CATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTT...CGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp GCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGAGCCAGGCCCGCTCCTaGATGAAGCCTATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AQPRCRRRCSAHPWPCSVSQARS*MKPMKG
Trigger: ACCCTTCATAGGCTTCATCCAGGAGCGGGCCTGGCT...CACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAAGGCCACGTTGAGCTaGGTGAGCGCACCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEKATLS*VSAPSL
Trigger: CAGGGACGGTGCGCTCACCCAGCTCAACGTGGCCTT...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGATGTGGGCCCCCATGTACACCTTaGCCGCATTTGCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: CSAHPWPCSVHPHRRRCGPPCTP*PHLPMA
Trigger: TGCCATGGGCAAATGCGGCCAAGGTGTACATGGGGG...CCCACATCTACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412064.6
CDS-3UTR CCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGACCACAAGCTCGTACTaGCGAATGGACAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLTTSSY*RMDKKQ
Trigger: CTGCTTCTTGTCCATTCGCCAGTACGAGCTTGTGGT...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS-3UTR CCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTGCCTTTCAGATACATaGATCTGGAGTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGCLSDT*IWSPQG
Trigger: TCCCTGGGGACTCCAGATCCATGTATCTGAAAGGCA...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS-3UTR TCA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGTCATGTCCGTCATGCTaGAAAGAGATACTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: YGREPGELITGRSLWGGWSCPSC*KEILLR
Trigger: CCGAAGAAGTATCTCTTTTCAGCATGACGGACATGA...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGAGGAGGTCAATGTCTaGATTTTGGTGAACTCGGGG +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESEEVNV*ILVNSG
Trigger: CCCCGAGTTCACCAAAATTCAGACATTGACCTCCTC...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGGAGAGGAGGTCAATGTCTaGATTTTGGTGAACTCGGGG +
Preference number: 4 (lower is better)
Translates to: GGGLEGCLSDTWIWSPQGEEVNV*ILVNSG
Trigger: CCCCGAGTTCACCAAAATTCAGACATTGACCTCCTC...TCCCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp TGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCACAAAGCTGCTCTCTCTaGCAGAGGAGGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: WPRAQPRCRRRCSAHPWPQSCSL*QRRSMS
Trigger: AGACATTGACCTCCTCTGTCAGAGAGAGCAGCTTTG...TGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCAAAGCTGCTCTCTCTaGCAGAGGAGGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESQSCSL*QRRSMS
Trigger: AGACATTGACCTCCTCTGTCAGAGAGAGCAGCTTTG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCAACTTCCCAAACACCGCGAACTTaGCCCCAGAGAGATCCACGT +
Preference number: 4 (lower is better)
Translates to: CSVHPHRRRCGHRLRSTSQTPRT*PQRDPR
Trigger: ACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGTTTG...GGAAGTTGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412064.6
CDS-3UTR TCA 90 bp AGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCGTGGACCTTGGAGGATaGGGCGATGGAGTAGTAGCG +
Preference number: 4 (lower is better)
Translates to: SHDVVEGVLHIPGHVPCIVDLGG*GDGVVA
Trigger: CGCTACTACTCCATCGCCTCATCCTCCAAGGTCCAC...GATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR TCA 90 bp CCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: PRAQPRCRRRCSAHPWPCWSSVS*CSPPPA
Trigger: CGCAGGCGGTGGACTACATCAAGAAACTGATGACCA...ACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp CATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCAACTTCCACAGGTGCTCCGGTTGGTGGTGACTaGAGCCAGGAACGGATTCTT +
Preference number: 4 (lower is better)
Translates to: HPHRRRCGHRLRSTSTGAPVGGD*SQERIL
Trigger: AAGAATCCGTTCCTGGCTGCAGTCACCACCAACCGG...AGCACCTGTGGAAGTTGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp CGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGGTGCTCTCGGTCTTaGTTTAGCAGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: RRRCSAHPWPCSVHPHRRRCSRS*FSRCWT
Trigger: CGTCCAGCACCTGCTAAAGCAAGACCGAGAGCACCT...ACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTATCAACTTCCACAGGTaGTCTCGGTCTTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGINFHR*SRSCFS
Trigger: GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGAT...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGATCAACTTCCACAGGTaGTCTCGGTCTTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: HPGDYGREPGELITGRSLINFHR*SRSCFS
Trigger: GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGAT...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAAGCAGGGGAGCCCCTaGTGCAGATGCACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEKQGSP*CRCTRR
Trigger: CCTCCTTGTGCATCTGCAGCAGGGGCTCCCCTGCTT...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS-3UTR CCA 90 bp GCTTTAGCAGGTGCTGGACGTAGACCTTGTGGGACTGATTTTGGAGTCCGAGATGGCGTTGTCGATCTCTaGCAGGCTGCTCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: ALAGAGRRPCGTDFGVRDGVVDL*QAAQVG
Trigger: GCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCC...ATCTCGGACTCCAAAATCAGTCCCACAAGGTCTACGTCCAGCACCTGCTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412064.6
CDS-3UTR CCA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCCTCCCTCACCGTAGGTaGCCATGCAGAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSLPHRR*PCRKPP
Trigger: TGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAG...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATATGGGTGCTTCTTGTTaGACTCCTCATCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHMGASC*TPHPGC
Trigger: ACAACCTGGATGAGGAGTCCAACAAGAAGCACCCAT...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGATGGGTGCTTCTTGTTaGACTCCTCATCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVMGASC*TPHPGC
Trigger: ACAACCTGGATGAGGAGTCCAACAAGAAGCACCCAT...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCGTAGGGCACGGGAATaGGTGCTTCTTGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: AQPRCRRRCSAHPWPCSVRRARE*VLLVGL
Trigger: GAGTCCAACAAGAAGCACCCATTCCCGTGCCCTACG...CACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp TGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCAACTTCCAGTTGGGGTGGACCTTaGAGGATGAGGCGATGGAGT +
Preference number: 4 (lower is better)
Translates to: CSVHPHRRRCGHRLRSTSSWGGP*RMRRWS
Trigger: ACTCCATCGCCTCATCCTCCAAGGTCCACCCCAACT...GGAAGTTGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGTGCACAGAGTTGGGGTaGACCTTGGAGGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSRECTELG*TLEDEA
Trigger: CGCCTCATCCTCCAAGGTCCACCCCAACTCTGTGCA...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
3UTR CAA 72 bp AGGATTTTGCCCAGCTGGTTGACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACGTGGTCCCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: RILPSWLTRAES*AGYTATWSPDS
Trigger: TGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp CATCCCGTAGCGGTGGGCGTCCTTGGACAGGCGGTTGGCAAACTCCTCTGCAGTTCATGTCCGTCATGCTaGAAAGAGATACTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: HPVAVGVLGQAVGKLLCSSCPSC*KEILLR
Trigger: CCGAAGAAGTATCTCTTTTCAGCATGACGGACATGA...ACTGCAGAGGAGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCTACGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATTCATGTCCGTCATGCTaGAAAGAGATACTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHSCPSC*KEILLR
Trigger: CCGAAGAAGTATCTCTTTTCAGCATGACGGACATGA...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTTAGGAGACCCACGATaGGCGAAAACAGAATCATGT +
Preference number: 4 (lower is better)
Translates to: GDYGREPGELITGRSLWGLGDPR*AKTESC
Trigger: ACATGATTCTGTTTTCGCTCATCGTGGGTCTCCTAA...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCAGCCGTAGAACACGATaGTGTTCCTCCCCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRSRRTR*CSSPFS
Trigger: AGAAAACGGGGAGGAACATCATCGTGTTCTACGGCT...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCACTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRTCPWH*SARRSC
Trigger: ACAAGACCTACGAGCACTTCAATGCCATGGGCAAGT...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCCCCAGATTCATACCTaGTTTTGGAGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESPQIHT*FWSPRC
Trigger: ACATCTCGGACTCCAAAATCAGGTATGAATCTGGGG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCCCAGATTCATACCTaGTTTTGGAGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: PWPRAQPRCRRRCSAHPWPQIHT*FWSPRC
Trigger: ACATCTCGGACTCCAAAATCAGGTATGAATCTGGGG...CCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR TCA 90 bp GTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTATTTTGCCCAGCTGGTTaGCGAGAGCAGAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: VEGVLHIPGHVPCIPTDVFCPAG*REQSRW
Trigger: CCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAA...TACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR TCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCATGGCCACGCCCTTGTTaGTGCGGCCAGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSAWPRPC*CGQPWS
Trigger: AGACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCA...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCAACTTCCATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: CSVHPHRRRCGHRLRSTSMSNSR*MRWRSV
Trigger: AACCGAGCGCCACCTCATGCACCTGGAATTGGACAT...GGAAGTTGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCACTGGGCCTGCGCCCATaGCAAGGCCAAGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSALGLRP*QGQAKH
Trigger: GTGTTTGGCTTGGCCTTGGCATGGGCGCAGGCCCAG...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CTCCCAAGCGAGCCGGGCTGCGTTCCCTCTCCTGGCCACCGGGACATCCTCTATAGAAGAGTAAAGACATaGAGGAAACTCACCGTTTTC +
Preference number: 4 (lower is better)
Translates to: LPSEPGCVPSPGHRDILYRRVKT*RKLTVF
Trigger: GAAAACGGTGAGTTTCCTGCATGTCTTTACTCTTCT...ATAGAGGATGTCCCGGTGGCCAGGAGAGGGAACGCAGCCCGGCTCGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGACCACAAGCTCGTACTaGCGAATGCTGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSRETTSSY*RMLDSS
Trigger: CGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGT...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGCCCCCATGTACACCTTaGCCGCATCTATGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSREPPCTP*PHLCRC
Trigger: ACACCGACATAGATGCGGCCAAGGTGTACATGGGGG...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGGGGTACACAGCCACGTaGTCCCCAGATTCATACCTG +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSREGYTAT*SPDSYL
Trigger: CAGGTATGAATCTGGGGACCACGTGGCTGTGTACCC...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEWRMRR*SSSGPA
Trigger: TGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCA...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTATGTTCTGCACATCCCTaGCCATGTTCCGTGCATCCC +
Preference number: 4 (lower is better)
Translates to: VEGVLHIPGHVPCIPTDVCSAHP*PCSVHP
Trigger: GGGATGCACGGAACATGGCCAGGGATGTGCAGAACA...TACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CCA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGATTATTTACACTCACTaGAAATCACGTGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LREGARRADYRPESVGWVIIYTH*KSRGGA
Trigger: AGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGGGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGTTAGGAGACCCACGATaGGCGAAAACAGAATCATGT +
Preference number: 4 (lower is better)
Translates to: RVGVWRAAFQIHGSGVPRLGDPR*AKTESC
Trigger: ACATGATTCTGTTTTCGCTCATCGTGGGTCTCCTAA...CCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp CAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTTAGGAGACCCACGATaGGCGAAAACAGAATCATGT +
Preference number: 4 (lower is better)
Translates to: QAPSSTRPGSSGPWSSVSLGDPR*AKTESC
Trigger: ACATGATTCTGTTTTCGCTCATCGTGGGTCTCCTAA...AGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGATGTCTGAATTTTGGTaGACTCGGGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PRRLREGARRADYRPESVMSEFW*TRGLLL
Trigger: AAGAAGAAGTCCCCGAGTTCACCAAAATTCAGACAT...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCCAAAGCTGCTCTCTCTaGCAGAGGAGGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSQSCSL*QRRSMS
Trigger: AGACATTGACCTCCTCTGTCAGAGAGAGCAGCTTTG...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGTTTTGCCCAGCTGGTTaGCGAGAGCAGAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEFCPAG*REQSRW
Trigger: CCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAA...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGTGGTCATCAGTTTCTTaGTGTAGTCCACCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSREWSSVS*CSPPPA
Trigger: CGCAGGCGGTGGACTACATCAAGAAACTGATGACCA...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTATGGACTCCTCGCCAGTaGCTTCCACCCCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LAPHVQGVAALGHQFLDVWTPRQ*LPPQSV
Trigger: AACACTTTGGGGTGGAAGCCACTGGCGAGGAGTCCA...TACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGTGGACTCCTCGCCAGTaGCTTCCACCCCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEWTPRQ*LPPQSV
Trigger: AACACTTTGGGGTGGAAGCCACTGGCGAGGAGTCCA...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCATCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSASRCMR*RSVPWF
Trigger: GAACCAGGGAACCGAGCGCCACCTCATGCACCTGGA...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp CAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCCCCGAGCTCAGCATTATTTACACTCACTaGAAATCACGTGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QFLDVVHRLRVLHGPELSIIYTH*KSRGGA
Trigger: AGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT...GCTGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR TCA 90 bp GTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCTTAGGAGACCCACGATaGGCGAAAACAGAATCATGT +
Preference number: 4 (lower is better)
Translates to: VAALGHQFLDVVHRLRVLLGDPR*AKTESC
Trigger: ACATGATTCTGTTTTCGCTCATCGTGGGTCTCCTAA...GAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCATGTCTGAATTTTGGTaGACTCGGGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGMSEFW*TRGLLL
Trigger: AAGAAGAAGTCCCCGAGTTCACCAAAATTCAGACAT...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTATGTCTGAATTTTGGTaGACTCGGGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TPRRLREGARRADYRPESMSEFW*TRGLLL
Trigger: AAGAAGAAGTCCCCGAGTTCACCAAAATTCAGACAT...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GGTGGGGGTCTGGAGGGCTGCCTTTCAGATACATGGATCTGGAGTCCCCAGGGAATGTCTGAATTTTGGTaGACTCGGGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGGLEGCLSDTWIWSPQGMSEFW*TRGLLL
Trigger: AAGAAGAAGTCCCCGAGTTCACCAAAATTCAGACAT...TCCCTGGGGACTCCAGATCCATGTATCTGAAAGGCAGCCCTCCAGACCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR TCA 90 bp GTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGAGGAGGTCAATGTCTaGATTTTGGTGAACTCGGGG +
Preference number: 4 (lower is better)
Translates to: VEGVLHIPGHVPCIPTDVEEVNV*ILVNSG
Trigger: CCCCGAGTTCACCAAAATTCAGACATTGACCTCCTC...TACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp AGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAGAAGCCGTAGAACACGATaGTGTTCCTCCCCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRCSAHPWPCSVHPHRRRSRRTR*CSSPFS
Trigger: AGAAAACGGGGAGGAACATCATCGTGTTCTACGGCT...TCTACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCCCCCAGATTCATACCTaGTTTTGGAGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSPQIHT*FWSPRC
Trigger: ACATCTCGGACTCCAAAATCAGGTATGAATCTGGGG...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR GCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEMSNSR*MRWRSV
Trigger: AACCGAGCGCCACCTCATGCACCTGGAATTGGACAT...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCGAAGCCTATGAAGGGTaGCACCCCGGTGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGEAYEG*HPGAGA
Trigger: GGCCCCGGCACCGGGGTGGCACCCTTCATAGGCTTC...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp CGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTATCAACTTCCACAGGTaGTCTCGGTCTTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: RRRCSAHPWPCSVHPHRRINFHR*SRSCFS
Trigger: GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGAT...ACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp TGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCAACTTCCATCAACTTCCACAGGTaGTCTCGGTCTTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: CSVHPHRRRCGHRLRSTSINFHR*SRSCFS
Trigger: GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGAT...GGAAGTTGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR GCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCTCCACCGCCTGCGCGTaGTCCATGGCCCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGSTACA*SMAPSS
Trigger: TGAGCTCGGGGCCATGGAGCACGCGCAGGCGGTGGA...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCATGCACAGAGTTGGGGTaGACCTTGGAGGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSACTELG*TLEDEA
Trigger: CGCCTCATCCTCCAAGGTCCACCCCAACTCTGTGCA...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGCCTGCGCGTGCTCCATaGCCCCGAGCTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLPARAP*PRAQPR
Trigger: TCGTGGCTGAGCTCGGGGCCATGGAGCACGCGCAGG...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATTCATGTCCGTCATGCTaGAAAGAGATACTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: PLAPHVQGVAALGHQFLDSCPSC*KEILLR
Trigger: CCGAAGAAGTATCTCTTTTCAGCATGACGGACATGA...ATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp CTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTACAAAGCTGCTCTCTCTaGCAGAGGAGGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: LAPHVQGVAALGHQFLDVQSCSL*QRRSMS
Trigger: AGACATTGACCTCCTCTGTCAGAGAGAGCAGCTTTG...TACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR TCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGACTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAETCPWH*SARRSC
Trigger: ACAAGACCTACGAGCACTTCAATGCCATGGGCAAGT...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGCCCCAGATTCATACCTaGTTTTGGAGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: YLHSLEITWRGWAQLSREPQIHT*FWSPRC
Trigger: ACATCTCGGACTCCAAAATCAGGTATGAATCTGGGG...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTTGTCCAGGTAGTAGGTaGGGGCCGTGCGGTAGGACG +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPACPGSR*GPCGRT
Trigger: CGTCCTACCGCACGGCCCTCACCTACTACCTGGACA...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp GTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTAATTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VEGVLHIPGHVPCIPTDVICPWH*SARRSC
Trigger: ACAAGACCTACGAGCACTTCAATGCCATGGGCAAAT...TACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412064.6
CDS-3UTR GCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCTGGGCCTGCGCCCATaGCAAGGCCAAGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPALGLRP*QGQAKH
Trigger: GTGTTTGGCTTGGCCTTGGCATGGGCGCAGGCCCAG...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATC +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSAELVST*ESPMLI
Trigger: GATCAACATGGGAGACTCCCACGTGGACACCAGCTC...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCGGACACGGTGGAGCTaGTGTCCACGTGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPARTRWS*CPRGSL
Trigger: GAGACTCCCACGTGGACACCAGCTCCACCGTGTCCG...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAAGTTGGGGTGGACCTTaGAGGATGAGGCGATGGAGT +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSASWGGP*RMRRWS
Trigger: ACTCCATCGCCTCATCCTCCAAGGTCCACCCCAACT...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp CGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCTGGATGTCTGAATTTTGGTaGACTCGGGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RCRRRCSAHPWPCSVHPWMSEFW*TRGLLL
Trigger: AAGAAGAAGTCCCCGAGTTCACCAAAATTCAGACAT...CCAGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS-3UTR GCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCGATCTCTGGCAGGCTaGTCAGGTCGGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPARSLAG*SGRPGH
Trigger: ATGACCTGGCCGACCTGAGCAGCCTGCCAGAGATCG...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGCAGGGGAGCCCCTGCTaGAGATGCACAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLQGSPC*RCTRRA
Trigger: TGCCCTCCTTGTGCATCTGCAGCAGGGGCTCCCCTG...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS-3UTR CCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTTCCAGGTGCATGAGGTaGCGCTCGGTTCCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPASRCMR*RSVPWF
Trigger: GAACCAGGGAACCGAGCGCCACCTCATGCACCTGGA...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTTCACTGGAAATCACGTaGAGGGGCTGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPASLEIT*RGWAQL
Trigger: GAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGA...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGGAGGTCAATGTCTaGATTTTGGTGAACTCGGGG +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSAEEVNV*ILVNSG
Trigger: CCCCGAGTTCACCAAAATTCAGACATTGACCTCCTC...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCGAAAGAGCCCTTCTGTaGAGCCACCGAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGERALL*SHRGPE
Trigger: CTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTC...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGCAGTCCTGCAGGATaGCCAGGATGTGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SKGQRLFKIIYTHWKSRGGSPAG*PGCASG
Trigger: CCCGGAGGCACATCCTGGCCATCCTGCAGGACTGCC...TCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTAGCCAGGCCCGCTCCTaGATGAAGCCTATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPASQARS*MKPMKG
Trigger: ACCCTTCATAGGCTTCATCCAGGAGCGGGCCTGGCT...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAAGCGCACCGTCCCTGTaGAACTGCGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SKGQRLFKIIYTHWKSRGSAPSL*NCASSS
Trigger: GGAGGAGCTGGCGCAGTTCCACAGGGACGGTGCGCT...TCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCTCCAAGCGCGAACTTaGCCCCAGAGAGATCCACGT +
Preference number: 4 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGLQART*PQRDPR
Trigger: ACGTGGATCTCTCTGGGGTCAAGTTCGCGCTTGGAG...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR GCA 90 bp TCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGACAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: SKGQRLFKIIYTHWKSRGQGPLT*LASRSG
Trigger: ACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTG...TCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAACCCCAGCTCAAAGATaGGCTGGGCGCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKGQRLFKIIYTHWKSRGTPAQR*AGRRAA
Trigger: AGCAGCTCGGCGCCCAGCGCATCTTTGAGCTGGGGT...TCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTTTGCGCAGCAGCTCCTaGTCCGAGGGCTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRLRSSS*SEGSEA
Trigger: CGCCTCGGAGCCCTCGGAGCAGGAGCTGCTGCGCAA...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCAAGGGCAGGCGGAACTaGGACTTGCGCACGAACATG +
Preference number: 4 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGKGRRN*DLRTNM
Trigger: CATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTT...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGAAGGGCAGGCGGAACTaGGACTTGCGCACGAACATG +
Preference number: 4 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLKGRRN*DLRTNM
Trigger: CATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCCTT...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGATTATTTACACTCACTaGAAATCACGTGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEIIYTH*KSRGGA
Trigger: AGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCATTAGGAGACCCACGATaGGCGAAAACAGAATCATGT +
Preference number: 4 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSALGDPR*AKTESC
Trigger: ACATGATTCTGTTTTCGCTCATCGTGGGTCTCCTAA...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGAAAGAGCCCTTCTGTaGAGCCACCGAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SKGQRLFKIIYTHWKSRGERALL*SHRGPE
Trigger: CTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTC...TCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTGAGGAGGTCAATGTCTaGATTTTGGTGAACTCGGGG +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPAEEVNV*ILVNSG
Trigger: CCCCGAGTTCACCAAAATTCAGACATTGACCTCCTC...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGCGTTGTCGATCTCTaGCAGGCTGCTCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRGVVDL*QAAQVG
Trigger: GCCGACCTGAGCAGCCTGCCAGAGATCGACAACGCC...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCGCATCTATGTCGGTGTaGACCACAAGCTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGASMSV*TTSSYW
Trigger: CCAGTACGAGCTTGTGGTCCACACCGACATAGATGC...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGATGCACAGAGTTGGGGTaGACCTTGGAGGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: SKGQRLFKIIYTHWKSRGCTELG*TLEDEA
Trigger: CGCCTCATCCTCCAAGGTCCACCCCAACTCTGTGCA...TCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCGAGGAGGTCAATGTCTaGATTTTGGTGAACTCGGGG +
Preference number: 4 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGEEVNV*ILVNSG
Trigger: CCCCGAGTTCACCAAAATTCAGACATTGACCTCCTC...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGACAAACACCGCGAACTTaGCCCCAGAGAGATCCACGT +
Preference number: 4 (lower is better)
Translates to: SKGQRLFKIIYTHWKSRGQTPRT*PQRDPR
Trigger: ACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGTTTG...TCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTCCAATTCCAGGTGCATaGGGTGGCGCTCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRPIPGA*GGARFP
Trigger: AGGGAACCGAGCGCCACCTCATGCACCTGGAATTGG...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTATGGGTGCTTCTTGTTaGACTCCTCATCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPAMGASC*TPHPGC
Trigger: ACAACCTGGATGAGGAGTCCAACAAGAAGCACCCAT...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGATCAACTTCCACAGGTaGTCTCGGTCTTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLINFHR*SRSCFS
Trigger: GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGAT...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGATGGGTGCTTCTTGTTaGACTCCTCATCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLMGASC*TPHPGC
Trigger: ACAACCTGGATGAGGAGTCCAACAAGAAGCACCCAT...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTCTCCCTCACCGTAGGTaGCCATGCAGAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRLPHRR*PCRKPP
Trigger: TGGTGGTTTTCTGCATGGCCACCTACGGTGAGGGAG...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGCATCTATGTCGGTGTaGACCACAAGCTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRASMSV*TTSSYW
Trigger: CCAGTACGAGCTTGTGGTCCACACCGACATAGATGC...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CCA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGATTATTTACACTCACTaGAAATCACGTGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLIIYTH*KSRGGA
Trigger: AGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR GCA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTATCAACTTCCACAGGTaGTCTCGGTCTTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRINFHR*SRSCFS
Trigger: GCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGAT...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTTCATGTCCGTCATGCTaGAAAGAGATACTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRSCPSC*KEILLR
Trigger: CCGAAGAAGTATCTCTTTTCAGCATGACGGACATGA...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR TCA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTTTAGGAGACCCACGATaGGCGAAAACAGAATCATGT +
Preference number: 4 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRLGDPR*AKTESC
Trigger: ACATGATTCTGTTTTCGCTCATCGTGGGTCTCCTAA...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS GCA 90 bp GGTGGGAGCCATGCCTTCCGCCCGAGCGTCGGGCCAGACGCGCAGTaGCCAGGCCCGAGGGCCCACCCCGACGCAGAGAGCCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: GGSHAFRPSVGPDAQ*PGPRAHPDAESQAA
Trigger: GGCCGCCTGGCTCTCTGCGTCGGGGTGGGCCCTCGGGCCTGGGCACTGCGCGTCTGGCCCGACGCTCGGGCGGAAGGCATGGCTCCCACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS CCA 90 bp GGGAGATCAGCTCTAGGGGAAGGGCGACGCGGAGGAGGGCCGGGGTaGGAGCCATGCCTTCCGCCCGAGCGTCGGGCCAGACGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: GRSALGEGRRGGGPG*EPCLPPERRARRAV
Trigger: CACTGCGCGTCTGGCCCGACGCTCGGGCGGAAGGCATGGCTCCCACCCCGGCCCTCCTCCGCGTCGCCCTTCCCCTAGAGCTGATCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS CCA 90 bp AGATGCACAAGGAGGGCAGGCGAGGGAGCAAGGAGGGAGGCGGCGTaGAGCTGCCGGGGGCCAGACGCCCAGAAGCCGGGGCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RCTRRAGEGARREAA*SCRGPDAQKPGQGW
Trigger: CCAGCCCTGCCCCGGCTTCTGGGCGTCTGGCCCCCGGCAGCTCCACGCCGCCTCCCTCCTTGCTCCCTCGCCTGCCCTCCTTGTGCATCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS CCA 90 bp CCAGGCGGCCGCGGTGAACTGAGGCGCCCGGCAAACCCCGAGTCTTaGGGCCCGACCTCACCCACCCCGCCGTCGCCGCGAAAGATAGCA +
Preference number: 5 (lower is better)
Translates to: PGGRGELRRPANPES*GPTSPTPPSPRKIA
Trigger: TGCTATCTTTCGCGGCGACGGCGGGGTGGGTGAGGTCGGGCCCCAAGACTCGGGGTTTGCCGGGCGCCTCAGTTCACCGCGGCCGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS-3UTR CAA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTTCCCCGGCAGGCTCCTaGGCCCGCAGCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PEASRGMEPGAPMQALGCSPAGS*ARSQLV
Trigger: CACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGA...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS CCA 90 bp CGGAGCTCCTGTGCCGCCTTGCACTCTGCCTGCTGTGAGCAGGGCTaGGCCTCCAGCGTGTGGCTGGCAGGGCAGTGCCGGCCCTCACCT +
Preference number: 5 (lower is better)
Translates to: RSSCAALHSACCEQG*ASSVWLAGQCRPSP
Trigger: AGGTGAGGGCCGGCACTGCCCTGCCAGCCACACGCTGGAGGCCCAGCCCTGCTCACAGCAGGCAGAGTGCAAGGCGGCACAGGAGCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS TCA 90 bp CCAGCGTGTGGCTGGCAGGGCAGTGCCGGCCCTCACCTTGGAGGATaGGGCGATGGAGTAGTAGCGGGCCTGCAGGCGCGGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: PACGWQGSAGPHLGG*GDGVVAGLQARQQL
Trigger: GAGCTGCTGCCGCGCCTGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCAAGGTGAGGGCCGGCACTGCCCTGCCAGCCACACGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS CCA 90 bp TGGGCCTCCAGCGTGTGGCTGGCAGGGCAGTGCCGGCCCTCACCTTaGAGGATGAGGCGATGGAGTAGTAGCGGGCCTGCAGGCGCGGCA +
Preference number: 5 (lower is better)
Translates to: WASSVWLAGQCRPSP*RMRRWSSSGPAGAA
Trigger: TGCCGCGCCTGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCAAGGTGAGGGCCGGCACTGCCCTGCCAGCCACACGCTGGAGGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS-3UTR CAA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTTTGGTGGCCACGCCCTaGTTGATGCGGCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: PEASRGMEPGAPMQALGCLVATP*LMRPAL
Trigger: CAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAA...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CAGCAGCTCCTGCTCCGAGGGCTCCGAGGCGTACTGCGCCAGCTCGTACAGCACGTCTCCCCCACCTCCTaGCCCTGCTGTCGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QQLLLRGLRGVLRQLVQHVSPTS*PCCRSQ
Trigger: CTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGAC...GTGCTGTACGAGCTGGCGCAGTACGCCTCGGAGCCCTCGGAGCAGGAGCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS GCA 90 bp TGCTGTGAGCAGGGCTGGGCCTCCAGCGTGTGGCTGGCAGGGCAGTaGCGGCCCTCACCTTGGAGGATGAGGCGATGGAGTAGTAGCGGG +
Preference number: 5 (lower is better)
Translates to: CCEQGWASSVWLAGQ*RPSPWRMRRWSSSG
Trigger: CCCGCTACTACTCCATCGCCTCATCCTCCAAGGTGAGGGCCGGCACTGCCCTGCCAGCCACACGCTGGAGGCCCAGCCCTGCTCACAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS CCA 90 bp CTAACCCTCAGCCGAGGGCCTGCCGGGCTCTCTCGGCCCAAGCTGTaGAAAAGTCGACCCTCAGGCCGCCGCGGGAGATCAGCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: LTLSRGPAGLSRPKL*KSRPSGRRGRSALG
Trigger: CCCTAGAGCTGATCTCCCGCGGCGGCCTGAGGGTCGACTTTTCCACAGCTTGGGCCGAGAGAGCCCGGCAGGCCCTCGGCTGAGGGTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS CCA 90 bp TGGCTGGCAGGGCAGTGCCGGCCCTCACCTTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCAGGCGCGGCAGCAGCTCACACAGGT +
Preference number: 5 (lower is better)
Translates to: WLAGQCRPSPWRMRR*SSSGPAGAAAAHTG
Trigger: ACCTGTGTGAGCTGCTGCCGCGCCTGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCAAGGTGAGGGCCGGCACTGCCCTGCCAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS CCA 90 bp CCAGGAGGAAGTCTCCCACACTCGAGTGAGGGTGCAGGCGTCCCCTaGCCAAGGGGCATGAGGGCAGTCTGCCGCCAGGGACAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: PGGSLPHSSEGAGVP*PRGMRAVCRQGQCQ
Trigger: CTGACACTGTCCCTGGCGGCAGACTGCCCTCATGCCCCTTGGCCAGGGGACGCCTGCACCCTCACTCGAGTGTGGGAGACTTCCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439297.1
CDS-3UTR CAA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTTCGGCACCCAGGATTTaGCCCAGCTGGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: PEASRGMEPGAPMQALGCSAPRI*PSWLTR
Trigger: TCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGA...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGGTACAGCTCCTTGCCCTCGCCGGAGGAGGAGGCCATCTTGCGCAGCAGCTCCGTGGCCACGCCCTTGTaGATGCGGCCAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RYSSLPSPEEEAILRSSSVATPL*MRPALV
Trigger: GACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCAC...GGAGCTGCTGCGCAAGATGGCCTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGTCCCCGGCAGGCTCCTaGGCCCGCAGCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PRRLREGARRADYRPESVSPAGS*ARSQLV
Trigger: CACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGA...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGGTCTCCCCCACCTCCTaGCCCTGCTGTCGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: YGREPGELITGRSLWGGWVSPTS*PCCRSQ
Trigger: CTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGAC...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCGGGAGAAGGCCACGTaGAGCTGGGTGAGCGCACCG +
Preference number: 5 (lower is better)
Translates to: LREGARRADYRPESVGWVREKAT*SWVSAP
Trigger: CGGTGCGCTCACCCAGCTCAACGTGGCCTTCTCCCG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS TCA 90 bp CAGCACGCGGTGGCAGCTTACCAGGTCATACTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTAGCGGTGGGCGTCCTTGGACAGGCG +
Preference number: 5 (lower is better)
Translates to: QHAVAAYQVILLRVR*HASHPVAVGVLGQA
Trigger: CGCCTGTCCAAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGTAAGCTGCCACCGCGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471238.5
CDS GCA 90 bp AGTGAGGGTGCAGGCGTCCCCTGGCCAAGGGGCATGAGGGCAGTCTaGCGCCAGGGACAGTGTCAGGAACTGACCTTCTCAGAGCGGGCT +
Preference number: 5 (lower is better)
Translates to: SEGAGVPWPRGMRAV*RQGQCQELTFSERA
Trigger: AGCCCGCTCTGAGAAGGTCAGTTCCTGACACTGTCCCTGGCGGCAGACTGCCCTCATGCCCCTTGGCCAGGGGACGCCTGCACCCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439297.1
CDS GCA 90 bp CGCGGTGGCAGCTTACCAGGTCATACTCCTCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGTGGGCGTCCTTGGACAGGCGGTTGG +
Preference number: 5 (lower is better)
Translates to: RGGSLPGHTPQGPLT*LASRSGGRPWTGGW
Trigger: CCAACCGCCTGTCCAAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGTAAGCTGCCACCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471238.5
CDS CCA 90 bp GTCCACAGCCTGGGGAGGCATTTGGAGCTGCGCTGGGGCTGGAACTaGAGCTCAGGGCTCAGATCTCGGAGCTCCTGTGCCGCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: VHSLGRHLELRWGWN*SSGLRSRSSCAALH
Trigger: GTGCAAGGCGGCACAGGAGCTCCGAGATCTGAGCCCTGAGCTCCAGTTCCAGCCCCAGCGCAGCTCCAAATGCCTCCCCAGGCTGTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495770.1
CDS-3UTR CAA 90 bp CCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTCGCTTGTCCACGTACTaGCCCATGGCATTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PEASRGMEPGAPMQALGCRLSTY*PMALKC
Trigger: GCACTTCAATGCCATGGGCAAGTACGTGGACAAGCG...ACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGGAGGCCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGCTCAGGTACAGCTCCTaGCCCTCGCCGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LREGARRADYRPESVGWVLRYSS*PSPEEE
Trigger: CTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGAG...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GCCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGTTGGCCCGCAGCCAGTaGGTGGCCACGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: AQLSREKEPFCAATEGQRLARSQ*VATPLL
Trigger: CAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAA...CCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGACAGGCGTGGTGGCCTaGAAGGGCAGGCGGAACTGG +
Preference number: 5 (lower is better)
Translates to: YGREPGELITGRSLWGGWTGVVA*KGRRNW
Trigger: CCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGT...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGGTCTCCCCCACCTCCTaGCCCTGCTGTCGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: HPGDYGREPGELITGRSLVSPTS*PCCRSQ
Trigger: CTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGAC...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTGTCTCCCCCACCTCCTaGCCCTGCTGTCGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QLSREKEPFCAATEGQRPVSPTS*PCCRSQ
Trigger: CTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGAC...AGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCGGGAGAAGGCCACGTaGAGCTGGGTGAGCGCACCG +
Preference number: 5 (lower is better)
Translates to: RRLREGARRADYRPESVGREKAT*SWVSAP
Trigger: CGGTGCGCTCACCCAGCTCAACGTGGCCTTCTCCCG...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS TCA 90 bp CGGGCTGCGTTCCCTCTCCTGGCCACCGGGACATCCTCTATGCGGTaGCGCCAGCCGTCTGCTAGACTTGATTACATGCCCATCGGGGCC +
Preference number: 5 (lower is better)
Translates to: RAAFPLLATGTSSMR*RQPSARLDYMPIGA
Trigger: GGCCCCGATGGGCATGTAATCAAGTCTAGCAGACGGCTGGCGTCACCGCATAGAGGATGTCCCGGTGGCCAGGAGAGGGAACGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS GCA 90 bp CCTCCTCCAAGTTCCCATCGTCGTCGCCCAACCCCAGCTCAAAGATaGGCTGGGCGCCGAGCTGCTCCAGCCGCTTGTCCACGTACTTGC +
Preference number: 5 (lower is better)
Translates to: PPPSSHRRRPTPAQR*AGRRAAPAACPRTC
Trigger: GCAAGTACGTGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCGCATCTTTGAGCTGGGGTTGGGCGACGACGATGGGAACTTGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000460892.1
ENST00000461988.6
CDS-3UTR CAA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGCTCAGGTACAGCTCCTaGCCCTCGCCGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PRRLREGARRADYRPESVLRYSS*PSPEEE
Trigger: CTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGAG...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGCTCAGGTACAGCTCCTaGCCCTCGCCGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RRLREGARRADYRPESVGLRYSS*PSPEEE
Trigger: CTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGAG...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGTGGCCACGCCCTTGTaGATGCGGCCAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: QQRERALLCSHRGPEASRVATPL*MRPALV
Trigger: GACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCAC...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGTGGCCACGCCCTTGTaGATGCGGCCAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GDYGREPGELITGRSLWGVATPL*MRPALV
Trigger: GACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCAC...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTGGCCCGCAGCCAGTaGGTGGCCACGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RRLREGARRADYRPESVGLARSQ*VATPLL
Trigger: CAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAA...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGTTGGCCCGCAGCCAGTaGGTGGCCACGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PRRLREGARRADYRPESVLARSQ*VATPLL
Trigger: CAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAA...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGACAGGCGTGGTGGCCTaGAAGGGCAGGCGGAACTGG +
Preference number: 5 (lower is better)
Translates to: PRRLREGARRADYRPESVTGVVA*KGRRNW
Trigger: CCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGT...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCGGGAGAAGGCCACGTaGAGCTGGGTGAGCGCACCG +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESREKAT*SWVSAP
Trigger: CGGTGCGCTCACCCAGCTCAACGTGGCCTTCTCCCG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGCCCAGAGGAGTCTTaGTCACTGGGCCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: PRRLREGARRADYRPESVGPEES*SLGLRP
Trigger: TGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCC...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS GCA 90 bp TCGTCGTCGCCCAACCCCAGCTCAAAGATGCGCTGGGCGCCGAGCTaGTCCAGCCGCTTGTCCACGTACTTGCCCATGGCATTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: SSSPNPSSKMRWAPS*SSRLSTYLPMALKC
Trigger: GCACTTCAATGCCATGGGCAAGTACGTGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCGCATCTTTGAGCTGGGGTTGGGCGACGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000460892.1
ENST00000461988.6
CDS GCA 90 bp ACAAGCTCGTACTGGCGAATGGACAAGAAGCAGGGGAGCCCCTGCTaGAGATGCACAAGGAGGGCAGGCGAGGGAGCAAGGAGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: TSSYWRMDKKQGSPC*RCTRRAGEGARREA
Trigger: CGCCTCCCTCCTTGCTCCCTCGCCTGCCCTCCTTGTGCATCTGCAGCAGGGGCTCCCCTGCTTCTTGTCCATTCGCCAGTACGAGCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS GCA 90 bp CGAGCCGGGCTGCGTTCCCTCTCCTGGCCACCGGGACATCCTCTATaGGGTGACGCCAGCCGTCTGCTAGACTTGATTACATGCCCATCG +
Preference number: 5 (lower is better)
Translates to: RAGLRSLSWPPGHPL*GDASRLLDLITCPS
Trigger: CGATGGGCATGTAATCAAGTCTAGCAGACGGCTGGCGTCACCGCATAGAGGATGTCCCGGTGGCCAGGAGAGGGAACGCAGCCCGGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS CCA 90 bp TCCAAGTTCCCATCGTCGTCGCCCAACCCCAGCTCAAAGATGCGCTaGGCGCCGAGCTGCTCCAGCCGCTTGTCCACGTACTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: SKFPSSSPNPSSKMR*APSCSSRLSTYLPM
Trigger: CATGGGCAAGTACGTGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCGCATCTTTGAGCTGGGGTTGGGCGACGACGATGGGAACTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000460892.1
ENST00000461988.6
CDS CCA 90 bp ACTTCTTCGGCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACGCTGGCAGCCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: TSSATASDTVELVST*ESPMLIMKRWQPGC
Trigger: GCAGCCGGGCTGCCAGCGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGCCGAAGAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000448410.5
ENST00000461988.6
ENST00000471238.5
CDS CCA 90 bp TGCTCCCTGTCCTACCCACTGCCTCCATCTGGGGCCAGCACGCGGTaGCAGCTTACCAGGTCATACTCCTCAGGGTCCGCTGACATGCCT +
Preference number: 5 (lower is better)
Translates to: CSLSYPLPPSGASTR*QLTRSYSSGSADMP
Trigger: AGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGTAAGCTGCCACCGCGTGCTGGCCCCAGATGGAGGCAGTGGGTAGGACAGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471238.5
CDS-3UTR CAA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGAGCTGCTCCAGCCGCTaGTCCACGTACTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: DYGREPGELITGRSLWGGSCSSR*STYLPM
Trigger: CATGGGCAAGTACGTGGACAAGCGGCTGGAGCAGCT...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACG +
Preference number: 5 (lower is better)
Translates to: LREGARRADYRPESVGWVTRAES*AGYTAT
Trigger: CGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGAGCTCGTACAGCACGTaGGTACGCGGCGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PRRLREGARRADYRPESVSSYST*VRGGLV
Trigger: CACCAACCCGCCGCGTACCAACGTGCTGTACGAGCT...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTAGCTCGTACAGCACGTaGGTACGCGGCGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GDYGREPGELITGRSLWGSSYST*VRGGLV
Trigger: CACCAACCCGCCGCGTACCAACGTGCTGTACGAGCT...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCTCAGGTACAGCTCCTaGCCCTCGCCGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESLRYSS*PSPEEE
Trigger: CTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGAG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCGAGTTGGGGTGGACCTaGGAGGATGAGGCGATGGAG +
Preference number: 5 (lower is better)
Translates to: PSSAERKSPSVQPPRARGELGWT*EDEAME
Trigger: CTCCATCGCCTCATCCTCCAAGGTCCACCCCAACTC...GCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGCCACGCCCTTGTaGATGCGGCCAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESVATPL*MRPALV
Trigger: GACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCAC...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTTGGTGGCCACGCCCTaGTTGATGCGGCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HPGDYGREPGELITGRSLLVATP*LMRPAL
Trigger: CAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAA...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTGGTGGCCACGCCCTaGTTGATGCGGCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: RRLREGARRADYRPESVGLVATP*LMRPAL
Trigger: CAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAA...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTTTGGCCCGCAGCCAGTaGGTGGCCACGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESLARSQ*VATPLL
Trigger: CAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAA...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCTGGTCCCCGGCAGGCTCCTaGGCCCGCAGCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RCRRRCSAHPWPCSVHPWSPAGS*ARSQLV
Trigger: CACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGA...CCAGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS-3UTR CAA 90 bp ACGAGAGCAGAGTCGTTGGCTGGGTACACAGCCACGTGGTCCCCAGATTCATACTCCCCGGCAGGCTCCTaGGCCCGCAGCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TRAESLAGYTATWSPDSYSPAGS*ARSQLV
Trigger: CACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGA...GTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGAGGCGGAACTGGGACTaGCGCACGAACATGGGCACC +
Preference number: 5 (lower is better)
Translates to: HPGDYGREPGELITGRSLRRNWD*RTNMGT
Trigger: GGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCT...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCGGAACTGGGACTaGCGCACGAACATGGGCACC +
Preference number: 5 (lower is better)
Translates to: SAERKSPSVQPPRARGLQRRNWD*RTNMGT
Trigger: GGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCT...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCAACAGGCGTGGTGGCCTaGAAGGGCAGGCGGAACTGG +
Preference number: 5 (lower is better)
Translates to: WPRAQPRCRRRCSAHPWPTGVVA*KGRRNW
Trigger: CCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGT...TGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCGGGAGAAGGCCACGTaGAGCTGGGTGAGCGCACCG +
Preference number: 5 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVREKAT*SWVSAP
Trigger: CGGTGCGCTCACCCAGCTCAACGTGGCCTTCTCCCG...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS TCA 90 bp CAACTGTGGCAGGCAGGGCCTTGTCCTCCCTGCCCCCTATTCCAGTaGCCCCACTCACTCACCCACAGACGTAGATGTGGGCACCGCCTT +
Preference number: 5 (lower is better)
Translates to: QLWQAGPCPPCPLFQ*PHSLTHRRRCGHRL
Trigger: AAGGCGGTGCCCACATCTACGTCTGTGGGTGAGTGAGTGGGGTCACTGGAATAGGGGGCAGGGAGGACAAGGCCCTGCCTGCCACAGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS GCA 90 bp ACCACAAGCTCGTACTGGCGAATGGACAAGAAGCAGGGGAGCCCCTaGTGCAGATGCACAAGGAGGGCAGGCGAGGGAGCAAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: TTSSYWRMDKKQGSP*CRCTRRAGEGARRE
Trigger: CTCCCTCCTTGCTCCCTCGCCTGCCCTCCTTGTGCATCTGCAGCAGGGGCTCCCCTGCTTCTTGTCCATTCGCCAGTACGAGCTTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS GCA 90 bp GAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTaGAGCCAGGAACGGATTCTTGGCATCAAAGGGGCTGGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: EVALGSLVQLPVGGD*SQERILGIKGAGWG
Trigger: TCCCCACCCAGCCCCTTTGATGCCAAGAATCCGTTCCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000496888.5
CDS CCA 90 bp ACTTCTTCGGCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACCCGCCGTCGCCGCGAAA +
Preference number: 5 (lower is better)
Translates to: TSSATASDTVELVST*ESPMLIMKPAVAAK
Trigger: TTTCGCGGCGACGGCGGGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGCCGAAGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414186.5
CDS-3UTR CAA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGAGCTGCTCCAGCCGCTaGTCCACGTACTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: RRLREGARRADYRPESVGSCSSR*STYLPM
Trigger: CATGGGCAAGTACGTGGACAAGCGGCTGGAGCAGCT...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CGCACCGTCCCTGTGGAACTGCGCCAGCTCCTCCCGGTACAGGTAGTCCTCATCTCCCCCATGTACACCTaGGCCGCATCTATGTCGGTG +
Preference number: 5 (lower is better)
Translates to: RTVPVELRQLLPVQVVLISPMYT*AASMSV
Trigger: CACCGACATAGATGCGGCCAAGGTGTACATGGGGGA...GATGAGGACTACCTGTACCGGGAGGAGCTGGCGCAGTTCCACAGGGACGGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp GTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTGCAGCCAGGAATGGTTCAGCTTCCGGTaGGTGGTGACTGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: VALGSLVQLPVGGDCSQEWFSFR*VVTAAR
Trigger: CCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCA...TTCCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CAA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGTTCAGCTTCCGGTaGGTGGTGACTGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RRLREGARRADYRPESVGWFSFR*VVTAAR
Trigger: CCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCA...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGATGGTTCAGCTTCCGGTaGGTGGTGACTGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QQRERALLCSHRGPEASRWFSFR*VVTAAR
Trigger: CCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCA...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTGGTTCAGCTTCCGGTaGGTGGTGACTGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GDYGREPGELITGRSLWGWFSFR*VVTAAR
Trigger: CCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCA...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACG +
Preference number: 5 (lower is better)
Translates to: GRPLAPHVQGVAALGHQFTRAES*AGYTAT
Trigger: CGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT...AAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp GCAGGCAGGCCCCTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGGGGAATGGGTGCTTCTaGTTGGACTCCTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: AGRPLAPHVQGVAALGHQGNGCF*LDSSSR
Trigger: CCTGGATGAGGAGTCCAACAAGAAGCACCCATTCCC...CTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAGGGGCCTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTAGCTCGTACAGCACGTaGGTACGCGGCGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESSSYST*VRGGLV
Trigger: CACCAACCCGCCGCGTACCAACGTGCTGTACGAGCT...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATGAGTTGGGGTGGACCTaGGAGGATGAGGCGATGGAG +
Preference number: 5 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHELGWT*EDEAME
Trigger: CTCCATCGCCTCATCCTCCAAGGTCCACCCCAACTC...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGGAGTTGGGGTGGACCTaGGAGGATGAGGCGATGGAG +
Preference number: 5 (lower is better)
Translates to: RRLREGARRADYRPESVGELGWT*EDEAME
Trigger: CTCCATCGCCTCATCCTCCAAGGTCCACCCCAACTC...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTTGATGCGGCCAGCCTaGGTCTCGTACTCCACAACC +
Preference number: 5 (lower is better)
Translates to: PAQQRERALLCSHRGPEALMRPA*VSYSTT
Trigger: GGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAA...GGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTTGATGCGGCCAGCCTaGGTCTCGTACTCCACAACC +
Preference number: 5 (lower is better)
Translates to: DYGREPGELITGRSLWGGLMRPA*VSYSTT
Trigger: GGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAA...CCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGAGGCGGAACTGGGACTaGCGCACGAACATGGGCACC +
Preference number: 5 (lower is better)
Translates to: PWPRAQPRCRRRCSAHPWRRNWD*RTNMGT
Trigger: GGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCT...CCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp TGTTCCGTGCATCCCCACAGACGTAGATGTGGGCACCGCCTTCGATCAACTTCCCGGGAGAAGGCCACGTaGAGCTGGGTGAGCGCACCG +
Preference number: 5 (lower is better)
Translates to: CSVHPHRRRCGHRLRSTSREKAT*SWVSAP
Trigger: CGGTGCGCTCACCCAGCTCAACGTGGCCTTCTCCCG...GGAAGTTGATCGAAGGCGGTGCCCACATCTACGTCTGTGGGGATGCACGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp GTGCATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTGGTGACTGCCCTCCAAGCGCGAACTaGACCCCAGAGAGATCCACG +
Preference number: 5 (lower is better)
Translates to: VHEVALGSLVQLPVGGDCPPSAN*TPERST
Trigger: CGTGGATCTCTCTGGGGTCAAGTTCGCGCTTGGAGG...GCAGTCACCACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS CCA 90 bp ACTTCTTCGGCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACTGTGTTGTGGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: TSSATASDTVELVST*ESPMLIMKLCCGGR
Trigger: GCGGCCCCCACAACACAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGCCGAAGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412521.5
CDS-3UTR CAA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGACCAAACACCGCGAACTaGACCCCAGAGAGATCCACG +
Preference number: 5 (lower is better)
Translates to: QQRERALLCSHRGPEASRPNTAN*TPERST
Trigger: CGTGGATCTCTCTGGGGTCAAGTTCGCGGTGTTTGG...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATTCCCCCATGTACACCTaGGCCGCATCTATGTCGGTG +
Preference number: 5 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHSPMYT*AASMSV
Trigger: CACCGACATAGATGCGGCCAAGGTGTACATGGGGGA...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTCCCCCATGTACACCTaGGCCGCATCTATGTCGGTG +
Preference number: 5 (lower is better)
Translates to: HPGDYGREPGELITGRSLSPMYT*AASMSV
Trigger: CACCGACATAGATGCGGCCAAGGTGTACATGGGGGA...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTCCCCCATGTACACCTaGGCCGCATCTATGTCGGTG +
Preference number: 5 (lower is better)
Translates to: RRLREGARRADYRPESVGSPMYT*AASMSV
Trigger: CACCGACATAGATGCGGCCAAGGTGTACATGGGGGA...CCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCTGGTTCAGCTTCCGGTaGGTGGTGACTGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGWFSFR*VVTAAR
Trigger: CCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCA...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACG +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESTRAES*AGYTAT
Trigger: CGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGGTACAGCTCCTTGCCCTCGCCGGAGGAGGAGGCCATCTTGCGCAGCAGCTCCATTTTGCCCAGCTGGTaGACGAGAGCAGAGTCGTTG +
Preference number: 5 (lower is better)
Translates to: RYSSLPSPEEEAILRSSSILPSW*TRAESL
Trigger: CAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAAT...GGAGCTGCTGCGCAAGATGGCCTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTTCGGCACCCAGGATTTaGCCCAGCTGGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: GDYGREPGELITGRSLWGSAPRI*PSWLTR
Trigger: TCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGA...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGACTCCTCATCCAGGTaGTTCAGGGACATGACGACG +
Preference number: 5 (lower is better)
Translates to: LREGARRADYRPESVGWVDSSSR*FRDMTT
Trigger: CGTCGTCATGTCCCTGAACAACCTGGATGAGGAGTC...CACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGCATCCCCACAGACGTCTCAGGTACAGCTCCTaGCCCTCGCCGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RRRCSAHPWPCSVHPHRRLRYSS*PSPEEE
Trigger: CTCCTCCTCCGGCGAGGGCAAGGAGCTGTACCTGAG...ACGTCTGTGGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp TGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCAGAGTTGGGGTGGACCTaGGAGGATGAGGCGATGGAG +
Preference number: 5 (lower is better)
Translates to: WPRAQPRCRRRCSAHPWPELGWT*EDEAME
Trigger: CTCCATCGCCTCATCCTCCAAGGTCCACCCCAACTC...TGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp CCATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGGAGTTGGGGTGGACCTaGGAGGATGAGGCGATGGAG +
Preference number: 5 (lower is better)
Translates to: PWPRAQPRCRRRCSAHPWELGWT*EDEAME
Trigger: CTCCATCGCCTCATCCTCCAAGGTCCACCCCAACTC...CCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp TCCAGGTTGTTCAGGGACATGACGACGTCCAGGTCGGCACCCAGGATTTTGCCCTTGGTGGCCACGCCCTaGTTGATGCGGCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: SRLFRDMTTSRSAPRILPLVATP*LMRPAL
Trigger: CAAGGCTGGCCGCATCAACAAGGGCGTGGCCACCAA...GGGCAAAATCCTGGGTGCCGACCTGGACGTCGTCATGTCCCTGAACAACCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCTTGGCCCGCAGCCAGTaGGTGGCCACGCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSLARSQ*VATPLL
Trigger: CAACAAGGGCGTGGCCACCAACTGGCTGCGGGCCAA...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp GTCCAATTCCAGGTGCATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTAGGCGGAACTGGGACTaGCGCACGAACATGGGCACC +
Preference number: 5 (lower is better)
Translates to: VQFQVHEVALGSLVQLPVRRNWD*RTNMGT
Trigger: GGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCT...AACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGGTCTCCCCCACCTCCTaGCCCTGCTGTCGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: YLHSLEITWRGWAQLSREVSPTS*PCCRSQ
Trigger: CTGGCTGCGACAGCAGGGCAAGGAGGTGGGGGAGAC...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CACCTTGGCCGCATCTATGTCGGTGTGGACCACAAGCTCGTACTGGCGAATGCTGGCCCAGAGGAGTCTTaGTCACTGGGCCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: HLGRIYVGVDHKLVLANAGPEES*SLGLRP
Trigger: TGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCC...AGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGATGCGGCCAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS TCA 90 bp AGCAGATGGAAAGTTCGGCCCTGTGCATCCCCTGTTCCGTACTGGTaGGGAAGTTGCCTGGGCCCGTGGCCTCAAAGTGCTCCTGGACAC +
Preference number: 5 (lower is better)
Translates to: SRWKVRPCASPVPYW*GSCLGPWPQSAPGH
Trigger: GTGTCCAGGAGCACTTTGAGGCCACGGGCCCAGGCAACTTCCTCACCAGTACGGAACAGGGGATGCACAGGGCCGAACTTTCCATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426184.1
ENST00000439297.1
ENST00000475509.1
CDS GCA 90 bp CCAGTGGCTTCCACCCCAAAGTGTTCACACACGGCCGGCCAGAACTaGTCTCGCCAGGTGATGAAGTCCTCCTCCAAGTTCCCATCGTCG +
Preference number: 5 (lower is better)
Translates to: PVASTPKCSHTAGQN*SRQVMKSSSKFPSS
Trigger: CGACGATGGGAACTTGGAGGAGGACTTCATCACCTGGCGAGAGCAGTTCTGGCCGGCCGTGTGTGAACACTTTGGGGTGGAAGCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000460892.1
ENST00000461988.6
CDS GCA 90 bp CCAGTGGCTTCCACCCCAAAGTGTTCACACACGGCCGGCCAGAACTaGTCTCGCCAGGTGATGAAGTCCTCCTCCAAGCGCGAACTTGAC +
Preference number: 5 (lower is better)
Translates to: PVASTPKCSHTAGQN*SRQVMKSSSKRELD
Trigger: GTCAAGTTCGCGCTTGGAGGAGGACTTCATCACCTGGCGAGAGCAGTTCTGGCCGGCCGTGTGTGAACACTTTGGGGTGGAAGCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS CCA 90 bp GTACTGGTGAGGAAGTTGCCTGGGCCCGTGGCCTCAAAGTGCTCCTaGACACCCCAAAGTCCTCTCGGAATTTCCCTGAGCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: VLVRKLPGPVASKCS*TPQSPLGISLSSCL
Trigger: CAGGCAGGAGCTCAGGGAAATTCCGAGAGGACTTTGGGGTGTCCAGGAGCACTTTGAGGCCACGGGCCCAGGCAACTTCCTCACCAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426184.1
ENST00000439297.1
ENST00000475509.1
CDS CCA 90 bp GCTCTCTCTGACAGAGGAGGTCCTTCTCAGAGCGGGCTCCTCAGGTaGAGACGAGTACGTGCACCCCATGGCTTCTCACTCTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: ALSDRGGPSQSGLLR*RRVRAPHGFSLSAP
Trigger: TGGAGCTGAGAGTGAGAAGCCATGGGGTGCACGTACTCGTCTCCACCTGAGGAGCCCGCTCTGAGAAGGACCTCCTCTGTCAGAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426184.1
CDS CCA 90 bp CGGCCCATCTCCCCCATGTACACCTTGGCCGCATCTATGTCGGTGTaGACCACAAGCTCGTACTGGCGAATGGACAAGAAGCAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: RPISPMYTLAASMSV*TTSSYWRMDKKQGS
Trigger: GCTCCCCTGCTTCTTGTCCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGATGCGGCCAAGGTGTACATGGGGGAGATGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS CCA 90 bp ACTTCTTCGGCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACTGGACAGCTGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: TSSATASDTVELVST*ESPMLIMKLDSWGC
Trigger: ACAGCCCCAGCTGTCCAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGCCGAAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453773.5
CDS CCA 90 bp AGCTGGTTGACGAGAGCAGAGTCGTTGGCTGGGTACACAGCCACGTaGTCCCCAGATTCATACCTGGAGGGAGATGTGAGGCTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: SWLTRAESLAGYTAT*SPDSYLEGDVRLGR
Trigger: CCTCCCGAGCCTCACATCTCCCTCCAGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487247.5
CDS-3UTR CAA 90 bp CATGGCCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCCAAACACCGCGAACTaGACCCCAGAGAGATCCACG +
Preference number: 5 (lower is better)
Translates to: HGPELSHDVVEGVLHIPGPNTAN*TPERST
Trigger: CGTGGATCTCTCTGGGGTCAAGTTCGCGGTGTTTGG...GCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000412064.6
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTCCAAACACCGCGAACTaGACCCCAGAGAGATCCACG +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESPNTAN*TPERST
Trigger: CGTGGATCTCTCTGGGGTCAAGTTCGCGGTGTTTGG...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGGCATCGCTTGTCCACGTACTaGCCCATGGCATTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: ERKSPSVQPPRARGLQRHRLSTY*PMALKC
Trigger: GCACTTCAATGCCATGGGCAAGTACGTGGACAAGCG...ATGCCTCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTCGCTTGTCCACGTACTaGCCCATGGCATTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: GDYGREPGELITGRSLWGRLSTY*PMALKC
Trigger: GCACTTCAATGCCATGGGCAAGTACGTGGACAAGCG...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCCATGGCAGCTGCTCCAGCCGCTaGTCCACGTACTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: ALGHQFLDVVHRLRVLHGSCSSR*STYLPM
Trigger: CATGGGCAAGTACGTGGACAAGCGGCTGGAGCAGCT...GCCATGGAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS-3UTR CAA 90 bp CAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGAGACTCCTCATCCAGGTaGTTCAGGGACATGACGACG +
Preference number: 5 (lower is better)
Translates to: QQRERALLCSHRGPEASRDSSSR*FRDMTT
Trigger: CGTCGTCATGTCCCTGAACAACCTGGATGAGGAGTC...TCTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGAATGGGTGCTTCTaGTTGGACTCCTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: GDYGREPGELITGRSLWGGNGCF*LDSSSR
Trigger: CCTGGATGAGGAGTCCAACAAGAAGCACCCATTCCC...ACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGAATGGGTGCTTCTaGTTGGACTCCTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: PRRLREGARRADYRPESVGNGCF*LDSSSR
Trigger: CCTGGATGAGGAGTCCAACAAGAAGCACCCATTCCC...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGACAGGCGTGGTGGCCTaGAAGGGCAGGCGGAACTGG +
Preference number: 5 (lower is better)
Translates to: YLHSLEITWRGWAQLSRETGVVA*KGRRNW
Trigger: CCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGT...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS TCA 90 bp CGCCGAGCTGCTCCAGCCGCTTGTCCACGTACTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGTTCCCAAGACCAAACACCTGCGTGG +
Preference number: 5 (lower is better)
Translates to: RRAAPAACPRTCPWH*SARRSCSQDQTPAW
Trigger: CCACGCAGGTGTTTGGTCTTGGGAACAAGACCTACGAGCACTTCAATGCCATGGGCAAGTACGTGGACAAGCGGCTGGAGCAGCTCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460892.1
CDS GCA 90 bp TGTTCCGTACTGGTGAGGAAGTTGCCTGGGCCCGTGGCCTCAAAGTaGTCCTGGACACCCCAAAGTCCTCTCGGAATTTCCCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSVLVRKLPGPVASK*SWTPQSPLGISLSS
Trigger: GGAGCTCAGGGAAATTCCGAGAGGACTTTGGGGTGTCCAGGAGCACTTTGAGGCCACGGGCCCAGGCAACTTCCTCACCAGTACGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426184.1
ENST00000439297.1
ENST00000475509.1
CDS CCA 90 bp ACTTCTTCGGCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAAAGGACTTGGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TSSATASDTVELVST*ESPMLIMKRTWWWW
Trigger: CCACCACCACCAAGTCCTTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGCCGAAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449920.5
CDS-3UTR CAA 90 bp GTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCAAAACCACCAGGGCGTaGTCGATCTCTGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VAALGHQFLDVVHRLRVLKTTRA*SISGRL
Trigger: CAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTT...GAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CAA 90 bp CCCCGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTAAAACCACCAGGGCGTaGTCGATCTCTGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PRAQPRCRRRCSAHPWPCKTTRA*SISGRL
Trigger: CAGCCTGCCAGAGATCGACAACGCCCTGGTGGTTTT...ACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000412064.6
ENST00000454934.5
CDS-3UTR CAA 90 bp TCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTCCAGATTTTGCCCAGCTGGTaGACGAGAGCAGAGTCGTTG +
Preference number: 5 (lower is better)
Translates to: SAERKSPSVQPPRARGLQILPSW*TRAESL
Trigger: CAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAAT...CTGGAGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGACTCCTCATCCAGGTaGTTCAGGGACATGACGACG +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESDSSSR*FRDMTT
Trigger: CGTCGTCATGTCCCTGAACAACCTGGATGAGGAGTC...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CACCGCCTTCGATCAACTTCCACAGGTGCTCTCGGTCTTGCTTTAGCAGGTGCTAGCTCGTACAGCACGTaGGTACGCGGCGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: HRLRSTSTGALGLALAGASSYST*VRGGLV
Trigger: CACCAACCCGCCGCGTACCAACGTGCTGTACGAGCT...AGCACCTGCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTGATCGAAGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp GTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTCTTGATGCGGCCAGCCTaGGTCTCGTACTCCACAACC +
Preference number: 5 (lower is better)
Translates to: VAALGHQFLDVVHRLRVLLMRPA*VSYSTT
Trigger: GGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAA...GAGCACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp ATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGGTGGCCACGCCCTTGTaGATGCGGCCAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: IIYTHWKSRGGAGPSSAEVATPL*MRPALV
Trigger: GACCAAGGCTGGCCGCATCAACAAGGGCGTGGCCAC...CTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGAGAGAGGCGGAACTGGGACTaGCGCACGAACATGGGCACC +
Preference number: 5 (lower is better)
Translates to: YLHSLEITWRGWAQLSRERRNWD*RTNMGT
Trigger: GGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCT...CTCTCTGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS TCA 90 bp CGCCGAGCTGCTCCAGCCGCTTGTCCACGTACTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGTTCCCAAGACCAAACACCGCGAACT +
Preference number: 5 (lower is better)
Translates to: RRAAPAACPRTCPWH*SARRSCSQDQTPRT
Trigger: AGTTCGCGGTGTTTGGTCTTGGGAACAAGACCTACGAGCACTTCAATGCCATGGGCAAGTACGTGGACAAGCGGCTGGAGCAGCTCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS GCA 90 bp GGCAGCTGGTACCTGATTTTGGAGTCCGAGATGTCCAATTCCAGGTaGATGAGGTGGCGCTCGGTTCCCTGGTTCAGCTTCCGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GSWYLILESEMSNSR*MRWRSVPWFSFRLV
Trigger: CACCAACCGGAAGCTGAACCAGGGAACCGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGGTACCAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487247.5
CDS CCA 90 bp ACTTCTTCGGCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACTGTCTGGACAGATCCCA +
Preference number: 5 (lower is better)
Translates to: TSSATASDTVELVST*ESPMLIMKLSGQIP
Trigger: TGGGATCTGTCCAGACAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGCCGAAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS CCA 90 bp GGTCAGGAGGCCCAGAGTGAGGGTTCAGGGGGTGACAGTGGCAGCTaGTACCTGATTTTGGAGTCCGAGATGTCCAATTCCAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: GQEAQSEGSGGDSGS*YLILESEMSNSRCM
Trigger: CATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGGTACCAGCTGCCACTGTCACCCCCTGAACCCTCACTCTGGGCCTCCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487247.5
CDS CCA 90 bp ACCCAGGATTTTGCCCAGCTGGTTGACGAGAGCAGAGTCGTTGGCTaGGTACACAGCCACGTGGTCCCCAGATTCATACCTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: TQDFAQLVDESRVVG*VHSHVVPRFIPGGR
Trigger: TCTCCCTCCAGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487247.5
CDS-3UTR CAA 90 bp ACACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTATTTTGCCCAGCTGGTaGACGAGAGCAGAGTCGTTG +
Preference number: 5 (lower is better)
Translates to: TPRRLREGARRADYRPESILPSW*TRAESL
Trigger: CAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAAT...AGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGTCGGCACCCAGGATTTaGCCCAGCTGGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: AQPRCRRRCSAHPWPCSVSAPRI*PSWLTR
Trigger: TCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGA...CACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp TCTATGTCGGTGTGGACCACAAGCTCGTACTGGCGAATGCTGGACTCCTCGCCATCGGCACCCAGGATTTaGCCCAGCTGGTTGACGAGA +
Preference number: 5 (lower is better)
Translates to: SMSVWTTSSYWRMLDSSPSAPRI*PSWLTR
Trigger: TCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGA...TGGCGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp CAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGACTCCTCATCCAGGTaGTTCAGGGACATGACGACG +
Preference number: 5 (lower is better)
Translates to: QGVAALGHQFLDVVHRLRDSSSR*FRDMTT
Trigger: CGTCGTCATGTCCCTGAACAACCTGGATGAGGAGTC...GCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp TCTATGTCGGTGTGGACCACAAGCTCGTACTGGCGAATGCTGGACTCCTCGCCATTGATGCGGCCAGCCTaGGTCTCGTACTCCACAACC +
Preference number: 5 (lower is better)
Translates to: SMSVWTTSSYWRMLDSSPLMRPA*VSYSTT
Trigger: GGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAA...TGGCGAGGAGTCCAGCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS-3UTR CAA 90 bp CTCTGGGTGACTCACCGCGAACTTGACCCCAGAGAGATCCACGTCTGTCTCCTGAGCCGTCTGCTAGACTaGATTACATGCCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: LWVTHRELDPREIHVCLLSRLLD*ITCPSG
Trigger: CCCCGATGGGCATGTAATCAAGTCTAGCAGACGGCT...CAGGAGACAGACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGAGTCACCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CAA 90 bp CTTTGGTTAGGCAAGAATGACTCCCAAGCGAGCCGGGCTGCGTTCCCTCTCCTGTGGGAGTCTCCCATGTaGATCATGAAACGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LWLGKNDSQASRAAFPLLWESPM*IMKRWQ
Trigger: CTGCCAGCGTTTCATGATCAACATGGGAGACTCCCA...CAGGAGAGGGAACGCAGCCCGGCTCGCTTGGGAGTCATTCTTGCCTAACCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS-3UTR CAA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAACAGGCGTGGTGGCCTaGAAGGGCAGGCGGAACTGG +
Preference number: 5 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSATGVVA*KGRRNW
Trigger: CCAGTTCCGCCTGCCCTTCAAGGCCACCACGCCTGT...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGGCCCAGAGGAGTCTTaGTCACTGGGCCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSAGPEES*SLGLRP
Trigger: TGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCC...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTGACACCTTGGCCGCATTaGCCCATGGCATTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: AQPRCRRRCSAHPWPCSVTPWPH*PMALKC
Trigger: GCACTTCAATGCCATGGGCAAATGCGGCCAAGGTGT...CACGGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412064.6
CDS TCA 90 bp CGCCGAGCTGCTCCAGCCGCTTGTCCACGTACTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGTTCCCAAGACCAAACACCTTTAGTC +
Preference number: 5 (lower is better)
Translates to: RRAAPAACPRTCPWH*SARRSCSQDQTPLV
Trigger: GACTAAAGGTGTTTGGTCTTGGGAACAAGACCTACGAGCACTTCAATGCCATGGGCAAGTACGTGGACAAGCGGCTGGAGCAGCTCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS GCA 90 bp CATCCTCTATGCGGTGACGCCAGCCGTCTGCTAGACTTGATTACATaGCCATCGGGGCCGAGGCTTCCTGAGAAGAGTAAAGACATGCAG +
Preference number: 5 (lower is better)
Translates to: HPLCGDASRLLDLIT*PSGPRLPEKSKDMQ
Trigger: CTGCATGTCTTTACTCTTCTCAGGAAGCCTCGGCCCCGATGGGCATGTAATCAAGTCTAGCAGACGGCTGGCGTCACCGCATAGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS CCA 90 bp ACTTCTTCGGCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACGTGCCATTCTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: TSSATASDTVELVST*ESPMLIMKRAILVE
Trigger: TTCAACAAGAATGGCACGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGCCGAAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432753.5
CDS-3UTR CAA 90 bp TACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGGGTGGGTGGGATTCATACCTGATTTaGGAGTCCGAGATGTCCAAT +
Preference number: 5 (lower is better)
Translates to: YGREPGELITGRSLWGGWDSYLI*ESEMSN
Trigger: ATTGGACATCTCGGACTCCAAAATCAGGTATGAATC...CCACCCACCCCACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CTTGCTTTAGCAGGTGCTGGACGTAGACCTTGTGGGACTGATTTTGGAGTCCGATCCCCCATGTACACCTaGGCCGCATTTGCCCATGGC +
Preference number: 5 (lower is better)
Translates to: LALAGAGRRPCGTDFGVRSPMYT*AAFAHG
Trigger: GCCATGGGCAAATGCGGCCAAGGTGTACATGGGGGA...TCGGACTCCAAAATCAGTCCCACAAGGTCTACGTCCAGCACCTGCTAAAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412064.6
CDS CCA 90 bp AGCGGCCGGGGCTTTGATCTGAGTCTCCGTCTCCAAGGACGCTTCTaGTTGCACAAAGCACAGGGAATCTCAGAGATCTCCATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SGRGFDLSLRLQGRF*LHKAQGISEISMRK
Trigger: TTTCCTCATGGAGATCTCTGAGATTCCCTGTGCTTTGTGCAACCAGAAGCGTCCTTGGAGACGGAGACTCAGATCAAAGCCCCGGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496888.5
CDS-3UTR CAA 90 bp CAGCTCAGCAGAGAGAAAGAGCCCTTCTGTGCAGCCACCGAGGGCCAGAGGCCTGATTCATACCTGATTTaGGAGTCCGAGATGTCCAAT +
Preference number: 5 (lower is better)
Translates to: QLSREKEPFCAATEGQRPDSYLI*ESEMSN
Trigger: ATTGGACATCTCGGACTCCAAAATCAGGTATGAATC...AGGCCTCTGGCCCTCGGTGGCTGCACAGAAGGGCTCTTTCTCTCTGCTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CACCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGGATTCATACCTGATTTaGGAGTCCGAGATGTCCAAT +
Preference number: 5 (lower is better)
Translates to: HPGDYGREPGELITGRSLDSYLI*ESEMSN
Trigger: ATTGGACATCTCGGACTCCAAAATCAGGTATGAATC...CAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp CCCAGGAGACTACGGGAGGGAGCCAGGAGAGCTGATTACAGGCCGGAGTCTGTGGATTCATACCTGATTTaGGAGTCCGAGATGTCCAAT +
Preference number: 5 (lower is better)
Translates to: PRRLREGARRADYRPESVDSYLI*ESEMSN
Trigger: ATTGGACATCTCGGACTCCAAAATCAGGTATGAATC...CACAGACTCCGGCCTGTAATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000447222.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGTCCCCGGCAGGCTCCTaGGCCCGCAGCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLSPAGS*ARSQLV
Trigger: CACCAACTGGCTGCGGGCCAAGGAGCCTGCCGGGGA...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTAGTCCACCGCCTGCGCGTGCTTGTGGGACTGATTTaGGAGTCCGAGATGTCCAAT +
Preference number: 5 (lower is better)
Translates to: GVAALGHQFLDVVHRLRVLVGLI*ESEMSN
Trigger: ATTGGACATCTCGGACTCCAAAATCAGTCCCACAAG...CACGCGCAGGCGGTGGACTACATCAAGAAACTGATGACCAAGGGCCGCTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412064.6
CDS TCA 90 bp GACGCTTCTGGTTGCACAAAGCACAGGGAATCTCAGAGATCTCCATaGGGAAATCTCACCGGTTACATCAAGGGCTCTCCCAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: DASGCTKHRESQRSP*GNLTGYIKGSPSLV
Trigger: GACCAGGCTGGGAGAGCCCTTGATGTAACCGGTGAGATTTCCTCATGGAGATCTCTGAGATTCCCTGTGCTTTGTGCAACCAGAAGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496888.5
CDS-3UTR CAA 90 bp CTAGCTCCACACGTCCAGGGAGTAGCGGCCCTTGGTCATCAGTTTCTTGATGTATGGGAGTCTCCCATGTaGATCATGAAACGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LAPHVQGVAALGHQFLDVWESPM*IMKRWQ
Trigger: CTGCCAGCGTTTCATGATCAACATGGGAGACTCCCA...TACATCAAGAAACTGATGACCAAGGGCCGCTACTCCCTGGACGTGTGGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394893.5
CDS TCA 90 bp ACCTCTGCTATGCCAAATACTCTGATGGGAAAACTCTGGCGGTCTTaGCTGACAACTCTCTTCCGGGTCAGGCAGTCCCTACAATCGCTC +
Preference number: 5 (lower is better)
Translates to: TSAMPNTLMGKLWRS*LTTLFRVRQSLQSL
Trigger: GAGCGATTGTAGGGACTGCCTGACCCGGAAGAGAGTTGTCAGTCAAGACCGCCAGAGTTTTCCCATCAGAGTATTTGGCATAGCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS CCA 90 bp TCCGCCGCATTGAGAATGATCACTTGTGAGTTTGCTGCAGTGCCCTaGCACAGTTTGGGAGCCACCTCTGCTATGCCAAATACTCTGATG +
Preference number: 5 (lower is better)
Translates to: SAALRMITCEFAAVP*HSLGATSAMPNTLM
Trigger: CATCAGAGTATTTGGCATAGCAGAGGTGGCTCCCAAACTGTGCCAGGGCACTGCAGCAAACTCACAAGTGATCATTCTCAATGCGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS-3UTR CAA 90 bp AAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTCAGCAGGGAATGGGTGCTTCTaGTTGGACTCCTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: KIIYTHWKSRGGAGPSSAGNGCF*LDSSSR
Trigger: CCTGGATGAGGAGTCCAACAAGAAGCACCCATTCCC...TGCTGAGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCGGCCCAGAGGAGTCTTaGTCACTGGGCCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGGPEES*SLGLRP
Trigger: TGGGCGCAGGCCCAGTGACAAAGACTCCTCTGGGCC...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS TCA 90 bp CGTGAACTGTCCCAAGCTAGCACTTCGCATGGAGTTCAACAGACTTaGGCGTCCGCCGCATTGAGAATGATCACTTGTGAGTTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: RELSQASTSHGVQQT*ASAALRMITCEFAA
Trigger: TGCAGCAAACTCACAAGTGATCATTCTCAATGCGGCGGACGCTCAAGTCTGTTGAACTCCATGCGAAGTGCTAGCTTGGGACAGTTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS CCA 90 bp GCTGGTGTCCACGTGGGAGTCTCCCATGTTGATCATGAAACTGTCTaGACAGATCCCAAATGTCCTTCGTTTGTGGAGTCCCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: AGVHVGVSHVDHETV*TDPKCPSFVESLVS
Trigger: AGATACCAGGGACTCCACAAACGAAGGACATTTGGGATCTGTCCAGACAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS-3UTR CAA 90 bp CGAGCTCAGCCACGATGTCGTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGATTCATACCTGATTTaGGAGTCCGAGATGTCCAAT +
Preference number: 5 (lower is better)
Translates to: RAQPRCRRRCSAHPWPCSDSYLI*ESEMSN
Trigger: ATTGGACATCTCGGACTCCAAAATCAGGTATGAATC...GGAACATGGCCAGGGATGTGCAGAACACCTTCTACGACATCGTGGCTGAGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000454934.5
CDS-3UTR CAA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGAGCTCGTACAGCACGTaGGTACGCGGCGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLSSYST*VRGGLV
Trigger: CACCAACCCGCCGCGTACCAACGTGCTGTACGAGCT...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGTGGTTCAGCTTCCGGTaGGTGGTGACTGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLWFSFR*VVTAAR
Trigger: CCTGGCTGCAGTCACCACCAACCGGAAGCTGAACCA...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACG +
Preference number: 5 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGTRAES*AGYTAT
Trigger: CGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTTTGATGCGGCCAGCCTaGGTCTCGTACTCCACAACC +
Preference number: 5 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPALMRPA*VSYSTT
Trigger: GGTTGTGGAGTACGAGACCAAGGCTGGCCGCATCAA...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCCCAGCTGGGAATGGGTGCTTCTaGTTGGACTCCTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: YLKLFTLTGNHVEGLGPAGNGCF*LDSSSR
Trigger: CCTGGATGAGGAGTCCAACAAGAAGCACCCATTCCC...AGCTGGGCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACG +
Preference number: 5 (lower is better)
Translates to: SKGQRLFKIIYTHWKSRGTRAES*AGYTAT
Trigger: CGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT...TCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCGACTCCTCATCCAGGTaGTTCAGGGACATGACGACG +
Preference number: 5 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGDSSSR*FRDMTT
Trigger: CGTCGTCATGTCCCTGAACAACCTGGATGAGGAGTC...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGTGGGAGTCTCCCATGTaGATCATGAAACGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLWESPM*IMKRWQ
Trigger: CTGCCAGCGTTTCATGATCAACATGGGAGACTCCCA...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394893.5
ENST00000461988.6
CDS-3UTR CAA 90 bp AGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGGGCATTTTGCCCAGCTGGTaGACGAGAGCAGAGTCGTTG +
Preference number: 5 (lower is better)
Translates to: RGYLKLFTLTGNHVEGLGILPSW*TRAESL
Trigger: CAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAAT...GCCCAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp GCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTGGAGGGGCTGATTTTGCCCAGCTGGTaGACGAGAGCAGAGTCGTTG +
Preference number: 5 (lower is better)
Translates to: ARGYLKLFTLTGNHVEGLILPSW*TRAESL
Trigger: CAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAAT...CAGCCCCTCCACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000439269.1
ENST00000454934.5
ENST00000461988.6
CDS-3UTR CAA 90 bp TATTCCAAGGGCCAGAGGTTATTTAAAATTATTTACACTCACTGGAAATCACGTTCCCCCATGTACACCTaGGCCGCATCTATGTCGGTG +
Preference number: 5 (lower is better)
Translates to: YSKGQRLFKIIYTHWKSRSPMYT*AASMSV
Trigger: CACCGACATAGATGCGGCCAAGGTGTACATGGGGGA...ACGTGATTTCCAGTGAGTGTAAATAATTTTAAATAACCTCTGGCCCTTGGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394893.5
ENST00000454934.5
ENST00000461988.6
CDS GCA 72 bp CATGCCTTCCGCCCGAGCGTCGGGCCAGACGCGCAGTaGCCAGGCCCGAGGGCCCACCCCGACGCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: HAFRPSVGPDAQ*PGPRAHPDAES
Trigger: GCTCTCTGCGTCGGGGTGGGCCCTCGGGCCTGGGCACTGCGCGTCTGGCCCGACGCTCGGGCGGAAGGCATG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS TCA 72 bp GGGCCCACCCCGACGCAGAGAGCCAGGCGGCCGCGGTaGACTGAGGCGCCCGGCAAACCCCGAGTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: GPTPTQRARRPR*TEAPGKPRVLG
Trigger: CCCCAAGACTCGGGGTTTGCCGGGCGCCTCAGTTCACCGCGGCCGCCTGGCTCTCTGCGTCGGGGTGGGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS CCA 72 bp CGCGGTGAACTGAGGCGCCCGGCAAACCCCGAGTCTTaGGGCCCGACCTCACCCACCCCGCCGTCGCCGCGA +
Preference number: 6 (lower is better)
Translates to: RGELRRPANPES*GPTSPTPPSPR
Trigger: TCGCGGCGACGGCGGGGTGGGTGAGGTCGGGCCCCAAGACTCGGGGTTTGCCGGGCGCCTCAGTTCACCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS TCA 72 bp GGCTGGCAGGGCAGTGCCGGCCCTCACCTTGGAGGATaGGGCGATGGAGTAGTAGCGGGCCTGCAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: GWQGSAGPHLGG*GDGVVAGLQAR
Trigger: CCGCGCCTGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCAAGGTGAGGGCCGGCACTGCCCTGCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS CCA 72 bp TGCGAGGGGCACTGCCCTCAGGGATGCAGGCCGGGCTaGGGGGCTCCCGTGATCCATCGACTCAGCCCACCT +
Preference number: 6 (lower is better)
Translates to: CEGHCPQGCRPG*GAPVIHRLSPP
Trigger: AGGTGGGCTGAGTCGATGGATCACGGGAGCCCCCCAGCCCGGCCTGCATCCCTGAGGGCAGTGCCCCTCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412521.5
CDS GCA 72 bp CAGGGCTGGGCCTCCAGCGTGTGGCTGGCAGGGCAGTaGCGGCCCTCACCTTGGAGGATGAGGCGATGGAGT +
Preference number: 6 (lower is better)
Translates to: QGWASSVWLAGQ*RPSPWRMRRWS
Trigger: ACTCCATCGCCTCATCCTCCAAGGTGAGGGCCGGCACTGCCCTGCCAGCCACACGCTGGAGGCCCAGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS CCA 72 bp AGCCGAGGGCCTGCCGGGCTCTCTCGGCCCAAGCTGTaGAAAAGTCGACCCTCAGGCCGCCGCGGGAGATCA +
Preference number: 6 (lower is better)
Translates to: SRGPAGLSRPKL*KSRPSGRRGRS
Trigger: TGATCTCCCGCGGCGGCCTGAGGGTCGACTTTTCCACAGCTTGGGCCGAGAGAGCCCGGCAGGCCCTCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS CCA 72 bp TGCCGGGGGCCAGACGCCCAGAAGCCGGGGCAGGGCTaGGCAGGCTTCCATCTGGGAGAAGGTAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: CRGPDAQKPGQG*AGFHLGEGKEA
Trigger: GGCTTCCTTACCTTCTCCCAGATGGAAGCCTGCCCAGCCCTGCCCCGGCTTCTGGGCGTCTGGCCCCCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS CCA 72 bp GGGCAGTGCCGGCCCTCACCTTGGAGGATGAGGCGATaGAGTAGTAGCGGGCCTGCAGGCGCGGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GQCRPSPWRMRR*SSSGPAGAAAA
Trigger: AGCTGCTGCCGCGCCTGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCAAGGTGAGGGCCGGCACTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS GCA 72 bp GGGGCGCCCTACAGACCTGCTCCCTGTCCTACCCACTaGCTCCATCTGGGGCCAGCACGCGGTGGCAGCTTA +
Preference number: 6 (lower is better)
Translates to: GAPYRPAPCPTH*LHLGPARGGSL
Trigger: TAAGCTGCCACCGCGTGCTGGCCCCAGATGGAGGCAGTGGGTAGGACAGGGAGCAGGTCTGTAGGGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471238.5
CDS CCA 72 bp AGTCTCCCACACTCGAGTGAGGGTGCAGGCGTCCCCTaGCCAAGGGGCATGAGGGCAGTCTGCCGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: SLPHSSEGAGVP*PRGMRAVCRQG
Trigger: TCCCTGGCGGCAGACTGCCCTCATGCCCCTTGGCCAGGGGACGCCTGCACCCTCACTCGAGTGTGGGAGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439297.1
CDS CCA 72 bp CCATCGTCGTCGCCCAACCCCAGCTCAAAGATGCGCTaGGCGCCGAGCTGCTCCAGCCGCTTGTCCACGTAC +
Preference number: 6 (lower is better)
Translates to: PSSSPNPSSKMR*APSCSSRLSTY
Trigger: GTACGTGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCGCATCTTTGAGCTGGGGTTGGGCGACGACGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000460892.1
ENST00000461988.6
CDS CCA 72 bp AGCGTGTGGCTGGCAGGGCAGTGCCGGCCCTCACCTTaGAGGATGAGGCGATGGAGTAGTAGCGGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SVWLAGQCRPSP*RMRRWSSSGPA
Trigger: TGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCAAGGTGAGGGCCGGCACTGCCCTGCCAGCCACACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487247.5
ENST00000495770.1
CDS GCA 72 bp AGTTCCCATCGTCGTCGCCCAACCCCAGCTCAAAGATaGGCTGGGCGCCGAGCTGCTCCAGCCGCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: SSHRRRPTPAQR*AGRRAAPAACP
Trigger: TGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCGCATCTTTGAGCTGGGGTTGGGCGACGACGATGGGAACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000460892.1
ENST00000461988.6
CDS GCA 72 bp CCTGAGATACCGAGCCCTAACCCTCAGCCGAGGGCCTaGCGGGCTCTCTCGGCCCAAGCTGTGGAAAAGTCG +
Preference number: 6 (lower is better)
Translates to: PEIPSPNPQPRA*RALSAQAVEKS
Trigger: CGACTTTTCCACAGCTTGGGCCGAGAGAGCCCGGCAGGCCCTCGGCTGAGGGTTAGGGCTCGGTATCTCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS TCA 72 bp ATCATGAAACTGTGTTGTGGGGGCCGCCGAGACACCTaGCTGCGAGGGGCACTGCCCTCAGGGATGCAGGCC +
Preference number: 6 (lower is better)
Translates to: IMKLCCGGRRDT*LRGALPSGMQA
Trigger: GGCCTGCATCCCTGAGGGCAGTGCCCCTCGCAGTCAGGTGTCTCGGCGGCCCCCACAACACAGTTTCATGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412521.5
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACCCGCCGTC +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKPAV
Trigger: GACGGCGGGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414186.5
CDS CCA 72 bp TCCTACCCACTGCCTCCATCTGGGGCCAGCACGCGGTaGCAGCTTACCAGGTCATACTCCTCAGGGTCCGCT +
Preference number: 6 (lower is better)
Translates to: SYPLPPSGASTR*QLTRSYSSGSA
Trigger: AGCGGACCCTGAGGAGTATGACCTGGTAAGCTGCCACCGCGTGCTGGCCCCAGATGGAGGCAGTGGGTAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471238.5
CDS TCA 72 bp GTGGCAGCTTACCAGGTCATACTCCTCAGGGTCCGCTaGCATGCCTCGCATCCCGTAGCGGTGGGCGTCCTT +
Preference number: 6 (lower is better)
Translates to: VAAYQVILLRVR*HASHPVAVGVL
Trigger: AAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGTAAGCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471238.5
CDS GCA 72 bp TACTGGCGAATGGACAAGAAGCAGGGGAGCCCCTGCTaGAGATGCACAAGGAGGGCAGGCGAGGGAGCAAGG +
Preference number: 6 (lower is better)
Translates to: YWRMDKKQGSPC*RCTRRAGEGAR
Trigger: CCTTGCTCCCTCGCCTGCCCTCCTTGTGCATCTGCAGCAGGGGCTCCCCTGCTTCTTGTCCATTCGCCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKRWQ
Trigger: CTGCCAGCGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000448410.5
ENST00000461988.6
ENST00000471238.5
CDS GCA 72 bp TCCACCCCAAAGTGTTCACACACGGCCGGCCAGAACTaGTCTCGCCAGGTGATGAAGTCCTCCTCCAAGCGC +
Preference number: 6 (lower is better)
Translates to: STPKCSHTAGQN*SRQVMKSSSKR
Trigger: GCGCTTGGAGGAGGACTTCATCACCTGGCGAGAGCAGTTCTGGCCGGCCGTGTGTGAACACTTTGGGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454934.5
CDS GCA 72 bp GTAGAAGGTGTTCTGCACATCCCTGGCCATGTTCCGTaGATCCCTGGGCAGGAAGAGGGGGTGCCACAGACG +
Preference number: 6 (lower is better)
Translates to: VEGVLHIPGHVP*IPGQEEGVPQT
Trigger: CGTCTGTGGCACCCCCTCTTCCTGCCCAGGGATGCACGGAACATGGCCAGGGATGTGCAGAACACCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447222.5
CDS GCA 72 bp AGCTTACCAGGTCATACTCCTCAGGGTCCGCTGACATaGCTCGCATCCCGTAGCGGTGGGCGTCCTTGGACA +
Preference number: 6 (lower is better)
Translates to: SLPGHTPQGPLT*LASRSGGRPWT
Trigger: TGTCCAAGGACGCCCACCGCTACGGGATGCGAGGCATGTCAGCGGACCCTGAGGAGTATGACCTGGTAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471238.5
CDS CCA 72 bp GACAGAGGAGGTCCTTCTCAGAGCGGGCTCCTCAGGTaGAGACGAGTACGTGCACCCCATGGCTTCTCACTC +
Preference number: 6 (lower is better)
Translates to: DRGGPSQSGLLR*RRVRAPHGFSL
Trigger: GAGTGAGAAGCCATGGGGTGCACGTACTCGTCTCCACCTGAGGAGCCCGCTCTGAGAAGGACCTCCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426184.1
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKLAL
Trigger: GAGAGCCAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439963.5
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACTGGACAGC +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKLDS
Trigger: GCTGTCCAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453773.5
CDS CAA 72 bp ACGGTGGAGCTGGTGTCCACGTGGGAGTCTCCCATGTaGATCATGAAACGCTGGCAGCCCGGCTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: TVELVSTWESPM*IMKRWQPGCSL
Trigger: CAGAGAGCAGCCGGGCTGCCAGCGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448410.5
ENST00000461988.6
CDS TCA 72 bp AAAGTTCGGCCCTGTGCATCCCCTGTTCCGTACTGGTaGGGAAGTTGCCTGGGCCCGTGGCCTCAAAGTGCT +
Preference number: 6 (lower is better)
Translates to: KVRPCASPVPYW*GSCLGPWPQSA
Trigger: AGCACTTTGAGGCCACGGGCCCAGGCAACTTCCTCACCAGTACGGAACAGGGGATGCACAGGGCCGAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426184.1
ENST00000439297.1
ENST00000475509.1
CDS TCA 72 bp TTCCCTCTCCTGGCCACCGGGACATCCTCTATGCGGTaGCGCCAGCCGTCTGCTAGACTTGATTACATGCCC +
Preference number: 6 (lower is better)
Translates to: FPLLATGTSSMR*RQPSARLDYMP
Trigger: GGGCATGTAATCAAGTCTAGCAGACGGCTGGCGTCACCGCATAGAGGATGTCCCGGTGGCCAGGAGAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS GCA 72 bp CGAGCGCCTCTCACGTTAGGTACCCCCAGAATTCGCTaGCTCCCGAGGCCCATTCATCGTACAGATGGGGAA +
Preference number: 6 (lower is better)
Translates to: RAPLTLGTPRIR*LPRPIHRTDGE
Trigger: TTCCCCATCTGTACGATGAATGGGCCTCGGGAGGCAGCGAATTCTGGGGGTACCTAACGTGAGAGGCGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS GCA 72 bp ACCAGCAGGGGCCAGCAGATGGAAAGTTCGGCCCTGTaGATCCCCTGTTCCGTACTGGTGAGGAAGTTGCCT +
Preference number: 6 (lower is better)
Translates to: TSRGQQMESSAL*IPCSVLVRKLP
Trigger: AGGCAACTTCCTCACCAGTACGGAACAGGGGATGCACAGGGCCGAACTTTCCATCTGCTGGCCCCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426184.1
ENST00000439297.1
ENST00000475509.1
CDS GCA 72 bp TTCTCAGAGCGGGCTCCTCAGGTGGAGACGAGTACGTaGACCCCATGGCTTCTCACTCTCAGCTCCAGGACT +
Preference number: 6 (lower is better)
Translates to: FSERAPQVETST*TPWLLTLSSRT
Trigger: AGTCCTGGAGCTGAGAGTGAGAAGCCATGGGGTGCACGTACTCGTCTCCACCTGAGGAGCCCGCTCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426184.1
ENST00000439297.1
ENST00000475509.1
CDS GCA 72 bp CTGCGTTCCCTCTCCTGGCCACCGGGACATCCTCTATaGGGTGACGCCAGCCGTCTGCTAGACTTGATTACA +
Preference number: 6 (lower is better)
Translates to: LRSLSWPPGHPL*GDASRLLDLIT
Trigger: TGTAATCAAGTCTAGCAGACGGCTGGCGTCACCGCATAGAGGATGTCCCGGTGGCCAGGAGAGGGAACGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACTGATGCTG +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKLML
Trigger: CAGCATCAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421059.1
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKLSG
Trigger: TCCAGACAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACGTGCCATT +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKRAI
Trigger: AATGGCACGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432753.5
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAAAGGACTTGG +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKRTW
Trigger: CCAAGTCCTTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449920.5
CDS CAA 72 bp ACGGTGGAGCTGGTGTCCACGTGGGAGTCTCCCATGTaGATCATGAAACCCGCCGTCGCCGCGAAAGATAGC +
Preference number: 6 (lower is better)
Translates to: TVELVSTWESPM*IMKPAVAAKDS
Trigger: GCTATCTTTCGCGGCGACGGCGGGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414186.5
CDS CAA 72 bp ACGGTGGAGCTGGTGTCCACGTGGGAGTCTCCCATGTaGATCATGAAACTGTGTTGTGGGGGCCGCCGAGAC +
Preference number: 6 (lower is better)
Translates to: TVELVSTWESPM*IMKLCCGGRRD
Trigger: GTCTCGGCGGCCCCCACAACACAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412521.5
CDS CAA 72 bp CATCCTCTATGCGGTGACGCCAGCCGTCTGCTAGACTaGATTACATGCCCATCGGGGCCGAGGCTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: HPLCGDASRLLD*ITCPSGPRLPE
Trigger: CTCAGGAAGCCTCGGCCCCGATGGGCATGTAATCAAGTCTAGCAGACGGCTGGCGTCACCGCATAGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS CAA 90 bp TCGGCACCCAGGATTTTGCCCAGCTGGTTGACGAGAGCAGAGTCGTaGGCTGGGTACACAGCCACGTGGTCCCCAGATTCATACCTGGAG +
Preference number: 6 (lower is better)
Translates to: SAPRILPSWLTRAES*AGYTATWSPDSYLE
Trigger: CTCCAGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGTCAACCAGCTGGGCAAAATCCTGGGTGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487247.5
CDS CAA 90 bp CCACCGGGACATCCTCTATGCGGTGACGCCAGCCGTCTGCTAGACTaGATTACATGCCCATCGGGGCCGAGGCTTCCTGAGAAGAGTAAA +
Preference number: 6 (lower is better)
Translates to: PPGHPLCGDASRLLD*ITCPSGPRLPEKSK
Trigger: TTTACTCTTCTCAGGAAGCCTCGGCCCCGATGGGCATGTAATCAAGTCTAGCAGACGGCTGGCGTCACCGCATAGAGGATGTCCCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS CAA 90 bp CAGAGTGAGGGTTCAGGGGGTGACAGTGGCAGCTGGTACCTGATTTaGGAGTCCGAGATGTCCAATTCCAGGTGCATGAGGTGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: QSEGSGGDSGSWYLI*ESEMSNSRCMRWRS
Trigger: CGAGCGCCACCTCATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGGTACCAGCTGCCACTGTCACCCCCTGAACCCTCACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487247.5
CDS GCA 72 bp TCCACCCCAAAGTGTTCACACACGGCCGGCCAGAACTaGTCTCGCCAGGTGATGAAGTCCTCCTCCAAGTTC +
Preference number: 6 (lower is better)
Translates to: STPKCSHTAGQN*SRQVMKSSSKF
Trigger: GAACTTGGAGGAGGACTTCATCACCTGGCGAGAGCAGTTCTGGCCGGCCGTGTGTGAACACTTTGGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000460892.1
ENST00000461988.6
CDS CCA 72 bp GCCACCGCCTCGGACACGGTGGAGCTGGTGTCCACGTaGGAGTCTCCCATGTTGATCATGAAACTGTGTTGT +
Preference number: 6 (lower is better)
Translates to: ATASDTVELVST*ESPMLIMKLCC
Trigger: ACAACACAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGTGTCCGAGGCGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412521.5
CDS CCA 72 bp ACGAGAGCAGAGTCGTTGGCTGGGTACACAGCCACGTaGTCCCCAGATTCATACCTGGAGGGAGATGTGAGG +
Preference number: 6 (lower is better)
Translates to: TRAESLAGYTAT*SPDSYLEGDVR
Trigger: CCTCACATCTCCCTCCAGGTATGAATCTGGGGACCACGTGGCTGTGTACCCAGCCAACGACTCTGCTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487247.5
CDS GCA 72 bp TGCGGTGACGCCAGCCGTCTGCTAGACTTGATTACATaGCCATCGGGGCCGAGGCTTCCTGAGAAGAGTAAA +
Preference number: 6 (lower is better)
Translates to: CGDASRLLDLIT*PSGPRLPEKSK
Trigger: TTTACTCTTCTCAGGAAGCCTCGGCCCCGATGGGCATGTAATCAAGTCTAGCAGACGGCTGGCGTCACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448410.5
CDS CCA 72 bp GCCCAGAGTGAGGGTTCAGGGGGTGACAGTGGCAGCTaGTACCTGATTTTGGAGTCCGAGATGTCCAATTCC +
Preference number: 6 (lower is better)
Translates to: AQSEGSGGDSGS*YLILESEMSNS
Trigger: GGAATTGGACATCTCGGACTCCAAAATCAGGTACCAGCTGCCACTGTCACCCCCTGAACCCTCACTCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487247.5
CDS CCA 72 bp TCCCCCATGTACACCTTGGCCGCATCTATGTCGGTGTaGACCACAAGCTCGTACTGGCGAATGGACAAGAAG +
Preference number: 6 (lower is better)
Translates to: SPMYTLAASMSV*TTSSYWRMDKK
Trigger: CTTCTTGTCCATTCGCCAGTACGAGCTTGTGGTCCACACCGACATAGATGCGGCCAAGGTGTACATGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439269.1
CDS TCA 72 bp GCTCCAGCCGCTTGTCCACGTACTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGTTCCCAAGACCAAACA +
Preference number: 6 (lower is better)
Translates to: APAACPRTCPWH*SARRSCSQDQT
Trigger: TGTTTGGTCTTGGGAACAAGACCTACGAGCACTTCAATGCCATGGGCAAGTACGTGGACAAGCGGCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394893.5
ENST00000447222.5
ENST00000460892.1
ENST00000461988.6
CDS CAA 90 bp GGCCGGGGCTTTGATCTGAGTCTCCGTCTCCAAGGACGCTTCTGGTaGCACAAAGCACAGGGAATCTCAGAGATCTCCATGAGGAAATCT +
Preference number: 6 (lower is better)
Translates to: GRGFDLSLRLQGRFW*HKAQGISEISMRKS
Trigger: AGATTTCCTCATGGAGATCTCTGAGATTCCCTGTGCTTTGTGCAACCAGAAGCGTCCTTGGAGACGGAGACTCAGATCAAAGCCCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496888.5
CDS TCA 72 bp CCCCATGTACACCTTGGCCGCATTTGCCCATGGCATTaGAGTGCTCGTAGGTCTTGTTCCCAAGACCAAACA +
Preference number: 6 (lower is better)
Translates to: PHVHLGRICPWH*SARRSCSQDQT
Trigger: TGTTTGGTCTTGGGAACAAGACCTACGAGCACTTCAATGCCATGGGCAAATGCGGCCAAGGTGTACATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412064.6
CDS TCA 72 bp CCGTTTTCTTCATCTTTTCCACAAAGCTGCTCTCTCTaGCAGAGGAGGTCCTTCTCAGAGCGGGCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: PFSSSFPQSCSL*QRRSFSERAPQ
Trigger: CTGAGGAGCCCGCTCTGAGAAGGACCTCCTCTGTCAGAGAGAGCAGCTTTGTGGAAAAGATGAAGAAAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426184.1
CDS CCA 72 bp GGCTTTGATCTGAGTCTCCGTCTCCAAGGACGCTTCTaGTTGCACAAAGCACAGGGAATCTCAGAGATCTCC +
Preference number: 6 (lower is better)
Translates to: GFDLSLRLQGRF*LHKAQGISEIS
Trigger: GGAGATCTCTGAGATTCCCTGTGCTTTGTGCAACCAGAAGCGTCCTTGGAGACGGAGACTCAGATCAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496888.5
CDS CAA 90 bp CACCTCTGCTATGCCAAATACTCTGATGGGAAAACTCTGGCGGTCTaGACTGACAACTCTCTTCCGGGTCAGGCAGTCCCTACAATCGCT +
Preference number: 6 (lower is better)
Translates to: HLCYAKYSDGKTLAV*TDNSLPGQAVPTIA
Trigger: AGCGATTGTAGGGACTGCCTGACCCGGAAGAGAGTTGTCAGTCAAGACCGCCAGAGTTTTCCCATCAGAGTATTTGGCATAGCAGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS TCA 72 bp ATGCCAAATACTCTGATGGGAAAACTCTGGCGGTCTTaGCTGACAACTCTCTTCCGGGTCAGGCAGTCCCTA +
Preference number: 6 (lower is better)
Translates to: MPNTLMGKLWRS*LTTLFRVRQSL
Trigger: TAGGGACTGCCTGACCCGGAAGAGAGTTGTCAGTCAAGACCGCCAGAGTTTTCCCATCAGAGTATTTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS TCA 72 bp TCCCAAGCTAGCACTTCGCATGGAGTTCAACAGACTTaGGCGTCCGCCGCATTGAGAATGATCACTTGTGAG +
Preference number: 6 (lower is better)
Translates to: SQASTSHGVQQT*ASAALRMITCE
Trigger: CTCACAAGTGATCATTCTCAATGCGGCGGACGCTCAAGTCTGTTGAACTCCATGCGAAGTGCTAGCTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS TCA 72 bp GGTTGCACAAAGCACAGGGAATCTCAGAGATCTCCATaGGGAAATCTCACCGGTTACATCAAGGGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GCTKHRESQRSP*GNLTGYIKGSP
Trigger: GGGAGAGCCCTTGATGTAACCGGTGAGATTTCCTCATGGAGATCTCTGAGATTCCCTGTGCTTTGTGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496888.5
CDS CAA 72 bp ATCACTTGTGAGTTTGCTGCAGTGCCCTGGCACAGTTaGGGAGCCACCTCTGCTATGCCAAATACTCTGATG +
Preference number: 6 (lower is better)
Translates to: ITCEFAAVPWHS*GATSAMPNTLM
Trigger: CATCAGAGTATTTGGCATAGCAGAGGTGGCTCCCAAACTGTGCCAGGGCACTGCAGCAAACTCACAAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS TCA 72 bp CCGTTTTCTTCATCTTTTCCACAAAGCTGCTCTCTCTaGCAGAGGAGGTCCTTGCTGTTAACTCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: PFSSSFPQSCSL*QRRSLLLTPGS
Trigger: GCTGCCTGGAGTTAACAGCAAGGACCTCCTCTGTCAGAGAGAGCAGCTTTGTGGAAAAGATGAAGAAAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439297.1
CDS CCA 72 bp TTGAGAATGATCACTTGTGAGTTTGCTGCAGTGCCCTaGCACAGTTTGGGAGCCACCTCTGCTATGCCAAAT +
Preference number: 6 (lower is better)
Translates to: LRMITCEFAAVP*HSLGATSAMPN
Trigger: ATTTGGCATAGCAGAGGTGGCTCCCAAACTGTGCCAGGGCACTGCAGCAAACTCACAAGTGATCATTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS CCA 72 bp CACGTGGGAGTCTCCCATGTTGATCATGAAACTGTCTaGACAGATCCCAAATGTCCTTCGTTTGTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: HVGVSHVDHETV*TDPKCPSFVES
Trigger: GGACTCCACAAACGAAGGACATTTGGGATCTGTCCAGACAGTTTCATGATCAACATGGGAGACTCCCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS CAA 72 bp ACGGTGGAGCTGGTGTCCACGTGGGAGTCTCCCATGTaGATCATGAAACTGGCTCTCTTCATTGTCCAAATA +
Preference number: 6 (lower is better)
Translates to: TVELVSTWESPM*IMKLALFIVQI
Trigger: TATTTGGACAATGAAGAGAGCCAGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439963.5
CDS CAA 72 bp TTTGATCTGAGTCTCCGTCTCCAAGGACGCTTCTGGTaGCACAAAGCACAGGGAATCTCAGAGATCTCCATG +
Preference number: 6 (lower is better)
Translates to: FDLSLRLQGRFW*HKAQGISEISM
Trigger: CATGGAGATCTCTGAGATTCCCTGTGCTTTGTGCAACCAGAAGCGTCCTTGGAGACGGAGACTCAGATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496888.5
CDS CAA 90 bp TTGAGAATGATCACTTGTGAGTTTGCTGCAGTGCCCTGGCACAGTTaGGGAGCCACCTCTGCTATGCCAAATACTCTGATGGGAAAACTC +
Preference number: 6 (lower is better)
Translates to: LRMITCEFAAVPWHS*GATSAMPNTLMGKL
Trigger: GAGTTTTCCCATCAGAGTATTTGGCATAGCAGAGGTGGCTCCCAAACTGTGCCAGGGCACTGCAGCAAACTCACAAGTGATCATTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS CAA 72 bp ACGGTGGAGCTGGTGTCCACGTGGGAGTCTCCCATGTaGATCATGAAACGTGCCATTCTTGTTGAATTGTAT +
Preference number: 6 (lower is better)
Translates to: TVELVSTWESPM*IMKRAILVELY
Trigger: ATACAATTCAACAAGAATGGCACGTTTCATGATCAACATGGGAGACTCCCACGTGGACACCAGCTCCACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432753.5
CDS CCA 72 bp GGACAGATCCCAAATGTCCTTCGTTTGTGGAGTCCCTaGTATCTCAGCAAATTTTTAATGGTATCCGTAGGC +
Preference number: 6 (lower is better)
Translates to: GQIPNVLRLWSP*YLSKFLMVSVG
Trigger: GCCTACGGATACCATTAAAAATTTGCTGAGATACCAGGGACTCCACAAACGAAGGACATTTGGGATCTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418341.1
CDS CAA 72 bp CCCATGTTGATCATGAAACGTGCCATTCTTGTTGAATaGTATGCTTGCTTCCCTCCCTGTGAGAGTTCTCAA +
Preference number: 6 (lower is better)
Translates to: PMLIMKRAILVE*YACFPPCESSQ
Trigger: TTGAGAACTCTCACAGGGAGGGAAGCAAGCATACAATTCAACAAGAATGGCACGTTTCATGATCAACATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432753.5
CDS CCA 72 bp AAACTGTCTGGACAGATCCCAAATGTCCTTCGTTTGTaGAGTCCCTGGTATCTCAGCAAATTTTTAATGGTA +
Preference number: 6 (lower is better)
Translates to: KLSGQIPNVLRL*SPWYLSKFLMV
Trigger: TACCATTAAAAATTTGCTGAGATACCAGGGACTCCACAAACGAAGGACATTTGGGATCTGTCCAGACAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418341.1