Pregenerated sensors for POPDC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000132429Ensembl transcript IDs: ENST00000254765.4, ENST00000474760.1, ENST00000489134.5
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCATTTTGCTATTTCACTaGGGAATGATGAAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPILLFH*GMMKRE Trigger: CTCTCTCTTCATCATTCCCCAGTGAAATAGCAAAAT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTCAGCGTCCCCCTCGTaGGTGCCTCGCCGCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPSASPS*VPRRPP Trigger: GGGTGGGCGGCGAGGCACTCACGAGGGGGACGCTGA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCGTCCCCCTCGTGAGTaGCTCGCCGCCCACCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPRPPRE*LAAHPA Trigger: CGCAGGGTGGGCGGCGAGGCACTCACGAGGGGGACG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTTTCCTTCCCAGCCCTaGCCGGAGCTTCAGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPFPSQP*PELQPG Trigger: GCCGGGCTGAAGCTCCGGGCAGGGCTGGGAAGGAAA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGCTCCTTCGGCCTCTTaGTTCCAGGTTGTGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPAPSAS*FQVVQT Trigger: AGTCTGCACAACCTGGAAGCAAGAGGCCGAAGGAGC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCCAACCCCAGCAAACTaGAGACATAAAGGAGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPPTPAN*RHKGAR Trigger: TCGGGCTCCTTTATGTCTTCAGTTTGCTGGGGTTGG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCTCTGTGGGTCTCAGTaGATCCCACTCAGGAGAATC | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPLCGSQ*IPLRRI Trigger: GATTCTCCTGAGTGGGATTCACTGAGACCCACAGAG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCCGGAAATGCCTATGTaGACAGTAGCAACCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPPEMPM*TVATHP Trigger: AGGGTGGGTTGCTACTGTCCACATAGGCATTTCCGG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGCAGTGAGGGTTACCTaGAAAATGCCTTCCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPAVRVT*KMPSSV Trigger: CACAGAGGAAGGCATTTTTCAGGTAACCCTCACTGC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCATGTTGTGTCAGGGGTaGTCTGCGTATTTCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPMLCQG*SAYFWS Trigger: ACTCCAGAAATACGCAGATCACCCCTGACACAACAT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCTTGCTTCCAGGTTGTaGAGACTGGGTGTTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPLASRL*RLGVHL Trigger: TAGATGAACACCCAGTCTGCACAACCTGGAAGCAAG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGGGTTACCTGAAAAATaGCTTCCTCTGTGGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPGLPEK*LPLWVS Trigger: TGAGACCCACAGAGGAAGGCATTTTTCAGGTAACCC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGTGTCAGGGGTGATCTaGGTATTTCTGGAGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPVSGVI*VFLELT Trigger: TGTCAACTCCAGAAATACGCAGATCACCCCTGACAC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCAAATGCCTTCCTCTGTaGGTCTCAGTGAATCCCACT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPKCLPL*VSVNPT Trigger: AGTGGGATTCACTGAGACCCACAGAGGAAGGCATTT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCACTCTGATCCTTCCTaGAACAAGCAAGGAGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPHSDPS*NKQGEF Trigger: AAACTCTCCTTGCTTGTTTCAGGAAGGATCAGAGTG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTTGAGAAGCAACTCCTaGGTCTATAGGGCAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPLRSNS*VYRARQ Trigger: TTGTCTTGCCCTATAGACTCAGGAGTTGCTTCTCAA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGGAAAATATGTCAGCTaGACAGACATCTACCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPGKYVS*TDIYPS Trigger: GCTTGGGTAGATGTCTGTGCAGCTGACATATTTTCC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCTCGGGCAAAGGTTATaGTGCGAACTTGATATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPLGQRL*CELDMQ Trigger: TTGCATATCAAGTTCGCAGCATAACCTTTGCCCGAG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCAGGCTGAGAATACTTaGTGGCTCTTTCTTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPQAENT*WLFLEK Trigger: CTTCTCAAGAAAGAGCCAGCAAGTATTCTCAGCCTG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGAGCTGTACAACACTTaGAATTCTCGGGCAAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPELYNT*NSRAKV Trigger: AACCTTTGCCCGAGAATTCCAAGTGTTGTACAGCTC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCGTGTGTACGGATCTTaGAAAACTAAGAATCCCATG | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPRVYGS*KTKNPM Trigger: CATGGGATTCTTAGTTTTTCAAGATCCGTACACACG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTTTGGTTCTCCATCATaGGAGTTTTGTGCAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPFGSPS*EFCAVF Trigger: GAAGACTGCACAAAACTCTCATGATGGAGAACCAAA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCAATCAGTTTCTGCAGTaGGGGTTACCTGAAAAATGC | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPNQFLQ*GLPEKC Trigger: GCATTTTTCAGGTAACCCTCACTGCAGAAACTGATT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGCGTATTTCTGGAGTTaGCATTTGATAGAAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPAYFWS*HLIEVG Trigger: CCCAACTTCTATCAAATGTCAACTCCAGAAATACGC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTATCGTCTGGAATTCTaGAAATGTTGTGTCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPYRLEF*KCCVRG Trigger: ACCCCTGACACAACATTTTCAGAATTCCAGACGATA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGGCTGTATTACTGCCTaGTTCACTTTTCAGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPGCITA*FTFQLT Trigger: AGTCAACTGAAAAGTGAAGCAGGCAGTAATACAGCC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCCATGGCTGTATTACTaGCTGCTTCACTTTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPPWLYY*LLHFSV Trigger: AACTGAAAAGTGAAGCAGGCAGTAATACAGCCATGG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTCTGGGCTCCTGATTTaGATCCAGTCTGCAAATATT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPSGLLI*IQSANI Trigger: AATATTTGCAGACTGGATCCAAATCAGGAGCCCAGA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCAGGAGAGTTTATCAATaGAAGTTTTCCCCTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPRRVYQ*KFSPAW Trigger: CCATGCAGGGGAAAACTTCCATTGATAAACTCTCCT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGCTGAGAATACTTGCTaGCTCTTTCTTGAGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPAENTC*LFLEKQ Trigger: TTGCTTCTCAAGAAAGAGCCAGCAAGTATTCTCAGC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR TCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCATCCACTGCCACCCATaGAACCTACTACAAATAAAA | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPIHCHP*NLLQIK Trigger: TTTTATTTGTAGTAGGTTTCATGGGTGGCAGTGGAT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGGGCAAAGGTTATGCTaGGAACTTGATATGCAATAT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPGQRLC*ELDMQY Trigger: ATATTGCATATCAAGTTCGCAGCATAACCTTTGCCC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTTCTTTAAGTTCATCTaGGCTCCTGATTTGGATCCA | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPFFKFI*APDLDP Trigger: TGGATCCAAATCAGGAGCCCAGATGAACTTAAAGAA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTTGAATTTCTTTCCATaGCTGTATTACTGCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPLNFFP*LYYCLL Trigger: AAGCAGGCAGTAATACAGCCATGGAAAGAAATTCAA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGATTTGGATCCAGTCTaGAAATATTTTGGTATTTCC | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPDLDPV*KYFGIS Trigger: GGAAATACCAAAATATTTGCAGACTGGATCCAAATC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCACATTTGATAGAAGTTaGGTAGCCGAATATCATAGT | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPTFDRS*VAEYHS Trigger: ACTATGATATTCGGCTACCCAACTTCTATCAAATGT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CCA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTATCACAGTATCGTCTaGAATTCTGAAAATGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPYHSIV*NSENVV Trigger: CACAACATTTTCAGAATTCCAGACGATACTGTGATA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGGCTCCTTCGGCCTCTaGCTTCCAGGTTGTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPGSFGL*LPGCAD Trigger: GTCTGCACAACCTGGAAGCAAGAGGCCGAAGGAGCC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCCCTCTTGCTTCCAGGTaGTGCAGACTGGGTGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPPLASR*CRLGVH Trigger: ATGAACACCCAGTCTGCACAACCTGGAAGCAAGAGG...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGGAGCTGTACAACACTaGGAATTCTCGGGCAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPGAVQH*EFSGKG Trigger: ACCTTTGCCCGAGAATTCCAAGTGTTGTACAGCTCC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCATCTGGGCTCCTGATTaGGATCCAGTCTGCAAATAT | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPIWAPD*DPVCKY Trigger: ATATTTGCAGACTGGATCCAAATCAGGAGCCCAGAT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCAAACGGACACTGGAGTaGATGCTGATTAAAGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPKRTLE*MLIKGF Trigger: GAAGCCTTTAATCAGCATCAACTCCAGTGTCCGTTT...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTTCATTCTCCCAGTTTaGATGCAGAAAAGGGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPFILPV*MQKRAN Trigger: GTTTGCCCTTTTCTGCATCAAAACTGGGAGAATGAA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS GCA 90 bp | TGGCAAGATGATAAATGGCTCCTTCGGCCTCTTGCTTCCAGGTTGTaGAGACTGGGTGTTCATCTATTAGGTTCTTCCATAAACTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: WQDDKWLLRPLASRL*RLGVHLLGSSINLN Trigger: ATTCAAGTTTATGGAAGAACCTAATAGATGAACACCCAGTCTGCACAACCTGGAAGCAAGAGGCCGAAGGAGCCATTTATCATCTTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS GCA 90 bp | CACAGTATCGTCTGGAATTCTGAAAATGTTGTGTCAGGGGTGATCTaGGTATTTCTGGAGTTGACATTTGATAGAAGTTGGGTAGCCGAA | + |
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Preference number: 5 (lower is better) Translates to: HSIVWNSENVVSGVI*VFLELTFDRSWVAE Trigger: TTCGGCTACCCAACTTCTATCAAATGTCAACTCCAGAAATACGCAGATCACCCCTGACACAACATTTTCAGAATTCCAGACGATACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCTGCTTCACTTTTCAGTaGACTTTAGATGACACTGAA | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPCFTFQ*TLDDTE Trigger: TTCAGTGTCATCTAAAGTCAACTGAAAAGTGAAGCA...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGGTTATGCTGCGAACTaGATATGCAATATGAACAAA | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPGYAAN*ICNMNK Trigger: TTTGTTCATATTGCATATCAAGTTCGCAGCATAACC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS-3UTR CAA 90 bp | CATTCTCCCAGTTTTGATGCAGAAAAGGGCAAACTGCCCATAGTTATCCACCCCGGCAAGACAATGCATTaGAGTAAATGTGAGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: HSPSFDAEKGKLPIVIHPGKTMH*SKCEKR Trigger: TCTTTTCTCACATTTACTCAAATGCATTGTCTTGCC...GGGGTGGATAACTATGGGCAGTTTGCCCTTTTCTGCATCAAAACTGGGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS CAA 90 bp | GGAGCTTCAGCCCGGCGCCCGCAGAAGTTTCCCGGCGGAGCGCGCTaGACCCGGGTGGCCCGCGCGGAAGCCCTCAGCGTCCCCCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: GASARRPQKFPGGAR*TRVARAEALSVPLV Trigger: CACGAGGGGGACGCTGAGGGCTTCCGCGCGGGCCACCCGGGTCAAGCGCGCTCCGCCGGGAAACTTCTGCGGGCGCCGGGCTGAAGCTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000254765.4 ENST00000474760.1 |
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| CDS CAA 72 bp | GATGATAAATGGCTCCTTCGGCCTCTTGCTTCCAGGTaGTGCAGACTGGGTGTTCATCTATTAGGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: DDKWLLRPLASR*CRLGVHLLGSS Trigger: GGAAGAACCTAATAGATGAACACCCAGTCTGCACAACCTGGAAGCAAGAGGCCGAAGGAGCCATTTATCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS GCA 72 bp | GATAAATGGCTCCTTCGGCCTCTTGCTTCCAGGTTGTaGAGACTGGGTGTTCATCTATTAGGTTCTTCCATA | + |
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Preference number: 6 (lower is better) Translates to: DKWLLRPLASRL*RLGVHLLGSSI Trigger: TATGGAAGAACCTAATAGATGAACACCCAGTCTGCACAACCTGGAAGCAAGAGGCCGAAGGAGCCATTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS CAA 90 bp | TACTGGCAAGATGATAAATGGCTCCTTCGGCCTCTTGCTTCCAGGTaGTGCAGACTGGGTGTTCATCTATTAGGTTCTTCCATAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: YWQDDKWLLRPLASR*CRLGVHLLGSSINL Trigger: CAAGTTTATGGAAGAACCTAATAGATGAACACCCAGTCTGCACAACCTGGAAGCAAGAGGCCGAAGGAGCCATTTATCATCTTGCCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS TCA 72 bp | AGACATAAAGGAGCCCGAAGAATCCACTGCCACCCATaGAACCTACTACAAATAAAATACTGGCAAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: RHKGARRIHCHP*NLLQIKYWQDD Trigger: ATCATCTTGCCAGTATTTTATTTGTAGTAGGTTTCATGGGTGGCAGTGGATTCTTCGGGCTCCTTTATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS GCA 72 bp | GTCTGGAATTCTGAAAATGTTGTGTCAGGGGTGATCTaGGTATTTCTGGAGTTGACATTTGATAGAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: VWNSENVVSGVI*VFLELTFDRSW Trigger: CCAACTTCTATCAAATGTCAACTCCAGAAATACGCAGATCACCCCTGACACAACATTTTCAGAATTCCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS CAA 90 bp | AGGTTGTGCAGACTGGGTGTTCATCTATTAGGTTCTTCCATAAACTaGAATTTCTTTCCATGGCTGTATTACTGCCTGCTTCACTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RLCRLGVHLLGSSIN*NFFPWLYYCLLHFS Trigger: TGAAAAGTGAAGCAGGCAGTAATACAGCCATGGAAAGAAATTCAAGTTTATGGAAGAACCTAATAGATGAACACCCAGTCTGCACAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS TCA 72 bp | CTGAAACAGGTAACTAAGTCCTTTGGTTCTCCATCATaGGAGTTTTGTGCAGTCTTCACAAAACCAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LKQVTKSFGSPS*EFCAVFTKPEK Trigger: TTTCTCTGGTTTTGTGAAGACTGCACAAAACTCTCATGATGGAGAACCAAAGGACTTAGTTACCTGTTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS GCA 72 bp | AGCTGTACAACACTTGGAATTCTCGGGCAAAGGTTATaGTGCGAACTTGATATGCAATATGAACAAATTGCA | + |
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Preference number: 6 (lower is better) Translates to: SCTTLGILGQRL*CELDMQYEQIA Trigger: TGCAATTTGTTCATATTGCATATCAAGTTCGCAGCATAACCTTTGCCCGAGAATTCCAAGTGTTGTACAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS CAA 72 bp | CATGCTCGCTTCTTTAAGTTCATCTGGGCTCCTGATTaGGATCCAGTCTGCAAATATTTTGGTATTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: HARFFKFIWAPD*DPVCKYFGISF Trigger: AAAGGAAATACCAAAATATTTGCAGACTGGATCCAAATCAGGAGCCCAGATGAACTTAAAGAAGCGAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254765.4 ENST00000474760.1 |
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| CDS CAA 72 bp | CATGCTCGCTTCTTTAAGTTCATCTGGGCTCCTGATTaGGATCCAGTCTGCAAATATTTTGGTATTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: HARFFKFIWAPD*DPVCKYFGISE Trigger: TTCTGAAATACCAAAATATTTGCAGACTGGATCCAAATCAGGAGCCCAGATGAACTTAAAGAAGCGAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489134.5 |
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| CDS CAA 90 bp | AATTCTGAAAATGTTGTGTCAGGGGTGATCTGCGTATTTCTGGAGTaGACATTTGATAGAAGTTGGGTAGCCGAATATCATAGTGATATC | + |
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Preference number: 6 (lower is better) Translates to: NSENVVSGVICVFLE*TFDRSWVAEYHSDI Trigger: GATATCACTATGATATTCGGCTACCCAACTTCTATCAAATGTCAACTCCAGAAATACGCAGATCACCCCTGACACAACATTTTCAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS CCA 72 bp | ATTTCAGACTTTGATGTCATTTATCACAGTATCGTCTaGAATTCTGAAAATGTTGTGTCAGGGGTGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: ISDFDVIYHSIV*NSENVVSGVIC Trigger: GCAGATCACCCCTGACACAACATTTTCAGAATTCCAGACGATACTGTGATAAATGACATCAAAGTCTGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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| CDS CAA 90 bp | TCGGGCAAAGGTTATGCTGCGAACTTGATATGCAATATGAACAAATaGCATGAAGCAGATGACAAACAGTACAAAATTCCAGGAAAATAT | + |
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Preference number: 6 (lower is better) Translates to: SGKGYAANLICNMNK*HEADDKQYKIPGKY Trigger: ATATTTTCCTGGAATTTTGTACTGTTTGTCATCTGCTTCATGCAATTTGTTCATATTGCATATCAAGTTCGCAGCATAACCTTTGCCCGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254765.4 |
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| CDS CCA 72 bp | ATCTGCGTATTTCTGGAGTTGACATTTGATAGAAGTTaGGTAGCCGAATATCATAGTGATATCTTTTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: ICVFLELTFDRS*VAEYHSDIFFL Trigger: TAGGAAAAAGATATCACTATGATATTCGGCTACCCAACTTCTATCAAATGTCAACTCCAGAAATACGCAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000254765.4 ENST00000474760.1 ENST00000489134.5 |
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