RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000105171

Ensembl transcript IDs: ENST00000221770.7, ENST00000585603.6, ENST00000586136.5, ENST00000586173.1, ENST00000586420.5, ENST00000586823.5, ENST00000587232.1, ENST00000588551.5, ENST00000590688.1, ENST00000591061.5, ENST00000591824.5, ENST00000592749.1, ENST00000592759.5

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGCGCTTGTGGCGGGTGAAGTACTCCAGGACCACCGCCTTGCGCTaGAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTGCTG +
Preference number: 1 (lower is better)
Translates to: LRLWRVKYSRTTALR*SWSSRACGLMRGVL
Trigger: CAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR CCA 90 bp TTGTGGCGGGTGAAGTACTCCAGGACCACCGCCTTGCGCTGCAGCTaGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTGCTGCGCTTC +
Preference number: 1 (lower is better)
Translates to: LWRVKYSRTTALRCS*SSRACGLMRGVLRF
Trigger: GAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTGGTCCTGGAGTACTTCACCCGCCACAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR GCA 90 bp CCTTTCAGTCCTCCATGGCTCAGCCTGGCAGCTCAGGAGTGGGCATaGTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATG +
Preference number: 1 (lower is better)
Translates to: PFSPPWLSLAAQEWA*CGRSHLTTLGQPCM
Trigger: CATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCACTCCTGAGCTGCCAGGCTGAGCCATGGAGGACTGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR TCA 90 bp ACTTGCATGGATGGAAGCAGGACCGAGGCACCGTGTTGGTCCCTGTaGGACTCTGGGTGCACTGAGCTTTGGGGAGGGGTGGTGGCACAG +
Preference number: 1 (lower is better)
Translates to: TCMDGSRTEAPCWSL*DSGCTELWGGVVAQ
Trigger: CTGTGCCACCACCCCTCCCCAAAGCTCAGTGCACCCAGAGTCTCACAGGGACCAACACGGTGCCTCGGTCCTGCTTCCATCCATGCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 90 bp GTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCTaGGGGAGAACAGATTTGTGGCCTGCCTTTCGCCAGGAGGGCTCC +
Preference number: 1 (lower is better)
Translates to: VEVTRNAKPWHCYFS*GRTDLWPAFRQEGS
Trigger: GGAGCCCTCCTGGCGAAAGGCAGGCCACAAATCTGTTCTCCCCCAGGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR GCA 90 bp AGGGATTTGCTCAGCGGGAAAGCAGGTAATAAAGGCAGCACATCCTaGACTTTGAACTGCATCCGTCTCATCCTGCAGCCACCCTGTAGC +
Preference number: 1 (lower is better)
Translates to: RDLLSGKAGNKGSTS*TLNCIRLILQPPCS
Trigger: GCTACAGGGTGGCTGCAGGATGAGACGGATGCAGTTCAAAGTGCAGGATGTGCTGCCTTTATTACCTGCTTTCCCGCTGAGCAAATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR GCA 90 bp AGCGGGAAAGCAGGTAATAAAGGCAGCACATCCTGCACTTTGAACTaGATCCGTCTCATCCTGCAGCCACCCTGTAGCTCAAAGCACAGT +
Preference number: 1 (lower is better)
Translates to: SGKAGNKGSTSCTLN*IRLILQPPCSSKHS
Trigger: ACTGTGCTTTGAGCTACAGGGTGGCTGCAGGATGAGACGGATGCAGTTCAAAGTGCAGGATGTGCTGCCTTTATTACCTGCTTTCCCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR GCA 90 bp GATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTaGTCAGCGGGAAAGCAGGTAATAAAGGCAGCACATCCTGCACTT +
Preference number: 1 (lower is better)
Translates to: DGWGNRCHFPLKTGI*SAGKQVIKAAHPAL
Trigger: AAGTGCAGGATGTGCTGCCTTTATTACCTGCTTTCCCGCTGAGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR TCA 90 bp GCCTTAGACGGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTTaGACTTCTTCGCAGACCGTTCACTTGACCGAAGCTGGAATTTGC +
Preference number: 1 (lower is better)
Translates to: ALDGKEFTGQSFPSL*TSSQTVHLTEAGIC
Trigger: GCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTGCCGTCTAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR CCA 90 bp TGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGTCACTaGCTGGAGGTGGTCTATAAATGGAATTGGCTTAACTATCTCTTC +
Preference number: 1 (lower is better)
Translates to: CDLPMLFNILNSERH*LEVVYKWNWLNYLF
Trigger: GAAGAGATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR TCA 90 bp GTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTaGCCGAAGCTGGAATTTGCTCCCGTAAATGTAGGAAATAAAGCC +
Preference number: 1 (lower is better)
Translates to: VNRSLRFELLRRPFT*PKLEFAPVNVGNKA
Trigger: GGCTTTATTTCCTACATTTACGGGAGCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR CCA 90 bp CTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTaGCTTAACTATCTCTTCACTGAAAGGTGGACATTTAGGGAGTGT +
Preference number: 1 (lower is better)
Translates to: LNSERHWLEVVYKWN*LNYLFTERWTFREC
Trigger: ACACTCCCTAAATGTCCACCTTTCAGTGAAGAGATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 90 bp ACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGTCACTGGCTaGAGGTGGTCTATAAATGGAATTGGCTTAACTATCTCTTCACTG +
Preference number: 1 (lower is better)
Translates to: TFPCCSTSSTRSVTG*RWSINGIGLTISSL
Trigger: CAGTGAAGAGATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATaGAATTGGCTTAACTATCTCTTCACTGAAAGGTGGACATTTAGG +
Preference number: 1 (lower is better)
Translates to: NILNSERHWLEVVYK*NWLNYLFTERWTFR
Trigger: CCTAAATGTCCACCTTTCAGTGAAGAGATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 90 bp CCATGTTGTTCAACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTaGTCTATAAATGGAATTGGCTTAACTATCTCTTCACTGAAAGGT +
Preference number: 1 (lower is better)
Translates to: PCCSTSSTRSVTGWR*SINGIGLTISSLKG
Trigger: ACCTTTCAGTGAAGAGATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTTGAACAACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR TCA 90 bp CCTAAGTCACTTAGCAACTCACCCTTCAATCCTCTTCAACCTTCCTaGAATAGCAAAGTAAACCTTAGGTGGGTCAGAGTTCCACCCAAA +
Preference number: 1 (lower is better)
Translates to: PKSLSNSPFNPLQPS*NSKVNLRWVRVPPK
Trigger: TTTGGGTGGAACTCTGACCCACCTAAGGTTTACTTTGCTATTTCAGGAAGGTTGAAGAGGATTGAAGGGTGAGTTGCTAAGTGACTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR TCA 90 bp CCTTCCCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTaGTCCCTGTTTATGTCCACATATGTACTGTATTATCACAGATGC +
Preference number: 1 (lower is better)
Translates to: PSLSTWLDCSNTSFI*SLFMSTYVLYYHRC
Trigger: GCATCTGTGATAATACAGTACATATGTGGACATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGGGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 90 bp GTGGTCTATAAATGGAATTGGCTTAACTATCTCTTCACTGAAAGGTaGACATTTAGGGAGTGTCCAGTTTTCAGCTGTCATAAACAACTG +
Preference number: 1 (lower is better)
Translates to: VVYKWNWLNYLFTER*TFRECPVFSCHKQL
Trigger: CAGTTGTTTATGACAGCTGAAAACTGGACACTCCCTAAATGTCCACCTTTCAGTGAAGAGATAGTTAAGCCAATTCCATTTATAGACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp GCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTGCCTTGCGCTGCAGCTaGTCCTCGCGGGCCTGCGGG +
Preference number: 2 (lower is better)
Translates to: AAPSFAWQRGLWLSSSSPALRCS*SSRACG
Trigger: CCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGC...AGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCTCCATGGCTCAGCCTaGCAGCTCAGGAGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: PFARRAPGLALLIGRDLLLHGSA*QLRSGH
Trigger: ATGCCCACTCCTGAGCTGCCAGGCTGAGCCATGGAG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCTGCTGGCTTGGCTTTTaGAGCAGGTCTCACCTCGGG +
Preference number: 2 (lower is better)
Translates to: PFARRAPGLALLIGRDLLCWLGF*SRSHLG
Trigger: CCCGAGGTGAGACCTGCTGCAAAAGCCAAGCCAGCA...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp TGCGTGTCTGGCTTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTGGCTCATGCGGGGCGTaGTGCGCTTCAGGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: CVSGLSPLHRSLMYCFQSGSCGA*CASGRP
Trigger: GGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCC...ACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAAGCCAGACACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCCCATCTCACTACGCTaGGGCAACCATGCATGGGCA +
Preference number: 2 (lower is better)
Translates to: PFARRAPGLALLIGRDLLPISLR*GNHAWA
Trigger: TGCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 90 bp TGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTTGCGCTaGTGGCGGGTGAAGTACTCCAGGACCACCGCCTTGCGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: CLAERPLAFFFFSLR*WRVKYSRTTALRCS
Trigger: GCTGCAGCGCAAGGCGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR GCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGTGTTAACCCCGGTGTaGTTCCTGCCAGTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: PFARRAPGLALLIGRDLLVLTPV*FLPVCS
Trigger: GGAACAGACTGGCAGGAAGCACACCGGGGTTAACAC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTACCCATCTGGTAGGCTaGTCCCCTGCCCCGCTCTCA +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCTHLVG*SPAPLS
Trigger: TGAGAGCGGGGCAGGGGACCAGCCTACCAGATGGGT...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGGGTGCACTGAGCTTTaGGGAGGGGTGGTGGCACAG +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCGCTEL*GGVVAQ
Trigger: CTGTGCCACCACCCCTCCCCAAAGCTCAGTGCACCC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 90 bp CTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTaGCGCTTGTGGCGGGTGAAGTACTCCAGGACCACCGCCTTGCGC +
Preference number: 2 (lower is better)
Translates to: LLCLAERPLAFFFFS*RLWRVKYSRTTALR
Trigger: GCGCAAGGCGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCCGTGTTGGTCCCTGTaGGACTCTGGGTGCACTGAG +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCPCWSL*DSGCTE
Trigger: CTCAGTGCACCCAGAGTCTCACAGGGACCAACACGG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCAAAGGGCGTCAATGCTaGTGGCTTGGCTTTTGCAGC +
Preference number: 2 (lower is better)
Translates to: PFARRAPGLALLIGRDLLKGRQC*WLGFCS
Trigger: GCTGCAAAAGCCAAGCCAGCAGCATTGACGCCCTTT...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGAGGGCTCCTGGCCTTaGCTTGCTGATCGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCEGSWP*LADRQR
Trigger: TCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCCTTCCCTTTCAACCTaGCTGGACTGCAGCAATACC +
Preference number: 2 (lower is better)
Translates to: PFARRAPGLALLIGRDLLPSLST*LDCSNT
Trigger: GGTATTGCTGCAGTCCAGCCAGGTTGAAAGGGAAGG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCCGCCAGGAGGGCTCCTaGCCTTGCCTTGCTGATCGG +
Preference number: 2 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSRQEGS*PCLADR
Trigger: CCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCG...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCTCAGAACACCCTGGTaGGCGGAGGACACTTGCATG +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCLRTPW*AEDTCM
Trigger: CATGCAAGTGTCCTCCGCTCACCAGGGTGTTCTGAG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTGGTAGGCTGGTCCCCTaGCCCGCTCTCACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAGRLVP*PALTAA
Trigger: GGCTGCAGTGAGAGCGGGGCAGGGGACCAGCCTACC...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTTGCTTGGGCTCCATGTaGCTAGCCCGTGCGTGTGTT +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCCLGSM*LARACV
Trigger: AACACACGCACGGGCTAGGCACATGGAGCCCAAGCA...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp AGGTCCCTGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAAAAGGCTGTATGGGCCTGCGGGCTCATaGGGGGCGTGCTGCGCTTCA +
Preference number: 2 (lower is better)
Translates to: RSLMYCFQSSWRGRKRLYGPAGS*GACCAS
Trigger: TGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCC...ATACAGCCTTTTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCAGGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR CCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCGTCACTGGCTGGAGGTaGTCTATAAATGGAATTGGC +
Preference number: 2 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGVTGWR*SINGIG
Trigger: GCCAATTCCATTTATAGACCACCTCCAGCCAGTGAC...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCCTTTCAGTCCTCCATaGCTCAGCCTGGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCPFSPP*LSLAAQ
Trigger: CTGAGCTGCCAGGCTGAGCCATGGAGGACTGAAAGG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTAACAGATTTGTGGCCTaGCTTTCGCCAGGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCNRFVA*LSPGGL
Trigger: GAGCCCTCCTGGCGAAAGGCAGGCCACAAATCTGTT...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCATGTGCCTAGCCCGTaGGTGTGTTCATCACTGGCA +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCHVPSP*VCSSLA
Trigger: TGCCAGTGATGAACACACGCACGGGCTAGGCACATG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp GTCTGGCTTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTTCATGCGCAGCTCCCTCCTTTaGCTGGCAGAGAGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: VWLEPTAQVPDVLFPEFMRSSLL*LAERPL
Trigger: CAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG...CATGAACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAAGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCTGGCAGCTCAGGAGTaGGCATGCTGCGGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFALAAQE*ACCGRS
Trigger: GGACCTGCCGCAGCATGCCCACTCCTGAGCTGCCAG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 90 bp ATGTCAAAGAGCCGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTaGGCTTTCTTCTTCTTCTCCTTGCGCTTGTGGCGGGTGAAGTAC +
Preference number: 2 (lower is better)
Translates to: MSKSRSSLLCLAERP*AFFFFSLRLWRVKY
Trigger: GTACTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCGGCTCTTTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR TCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTTCTCACCTCGGGAGGTaGTGCCGGGCGACCTCCTTT +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFASHLGR*CRATSF
Trigger: AAAGGAGGTCGCCCGGCATCACCTCCCGAGGTGAGA...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCCTGCATGGAAGGGCCTaGCCCACTGGCTTTACAGAC +
Preference number: 2 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSLHGRA*PTGFTD
Trigger: GTCTGTAAAGCCAGTGGGTCAGGCCCTTCCATGCAG...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCATGGGCACAGCTGCATaGAGTACTCTGCTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSMGTAA*STLLLG
Trigger: CCCCAGGAGCAGAGTACTGCATGCAGCTGTGCCCAT...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCTGCATGCAGTACTCTaGTCCTGGGGTCCACCCCAG +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFALHAVL*SWGPPQ
Trigger: CTGGGGTGGACCCCAGGAGCAGAGTACTGCATGCAG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCAACAGATTTGTGGCCTaGCTTTCGCCAGGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSNRFVA*LSPGGL
Trigger: GAGCCCTCCTGGCGAAAGGCAGGCCACAAATCTGTT...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCTGGGGCAACCATGCATaGGCACAGCTGCATGCAGTA +
Preference number: 2 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSWGNHA*AQLHAV
Trigger: TACTGCATGCAGCTGTGCCCATGCATGGTTGCCCCA...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTTTTGGGGAGGGGTGGTaGCACAGACCTGGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAFGEGW*HRPGPF
Trigger: GAAAGGCCCAGGTCTGTGCCACCACCCCTCCCCAAA...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 90 bp TCTCTGCTGCTCTGGTTTAATGTCAAAGAGCCGCAGCTCCCTCCTTaGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTTGCG +
Preference number: 2 (lower is better)
Translates to: SLLLWFNVKEPQLPP*PGREAFGFLLLLLA
Trigger: CGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR TCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGGGAGTCACACAAAATaGAAATCTCCTAGAAAGAGA +
Preference number: 2 (lower is better)
Translates to: PFARRAPGLALLIGRDLLGSHTK*KSPRKR
Trigger: TCTCTTTCTAGGAGATTTTCATTTTGTGTGACTCCC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCTTCACTTAGTACGCTaGGACCTTCCCATGTTGTTC +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCLHLVR*DLPMLF
Trigger: GAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCATGCATGGGCACAGCTaGATGCAGTACTCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSMHGHS*MQYSAP
Trigger: AGGAGCAGAGTACTGCATGCAGCTGTGCCCATGCAT...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCGAGGTGGTCTATAAATaGAATTGGCTTAACTATCTC +
Preference number: 2 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGEVVYK*NWLNYL
Trigger: GAGATAGTTAAGCCAATTCCATTTATAGACCACCTC...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTGGGCGTCAATGCTGCTaGCTTGGCTTTTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAGRQCC*LGFCSR
Trigger: CCTGCTGCAAAAGCCAAGCCAGCAGCATTGACGCCC...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 90 bp TTGCTCAGCGGGAAAGCAGGTAATAAAGGCAGCACATCCTGCACTTaGAACTGCATCCGTCTCATCCTGCAGCCACCCTGTAGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: LLSGKAGNKGSTSCT*NCIRLILQPPCSSK
Trigger: CTTTGAGCTACAGGGTGGCTGCAGGATGAGACGGATGCAGTTCAAAGTGCAGGATGTGCTGCCTTTATTACCTGCTTTCCCGCTGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTAATTCCTCTGTCCTCTaGCTTCTTCACTTAGTACGC +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCNSSVL*LLHLVR
Trigger: GCGTACTAAGTGAAGAAGTCAGAGGACAGAGGAATT...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCCGGAGCGTCACTGGCTaGAGGTGGTCTATAAATGGA +
Preference number: 2 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSRSVTG*RWSING
Trigger: TCCATTTATAGACCACCTCCAGCCAGTGACGCTCCG...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTATCTCAATCTACCCTTaGGTCAGCGAGGCCTTAGGC +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAISIYP*VSEALG
Trigger: GCCTAAGGCCTCGCTGACTCAAGGGTAGATTGAGAT...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp TGCGTGTCTGGCTTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTGAAATAATAGCCCCGTaGAGATCTGCCTTTAAGAGC +
Preference number: 2 (lower is better)
Translates to: CVSGLSPLHRSLMYCFQSEIIAP*RSAFKS
Trigger: GCTCTTAAAGGCAGATCTTCACGGGGCTATTATTTC...ACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAAGCCAGACACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR GCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCCTTCACTTAGTACGCTaGGACCTTCCCATGTTGTTC +
Preference number: 2 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSLHLVR*DLPMLF
Trigger: GAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAG...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 90 bp AAAGCACAGTTCTGGAGCCTATTAGGTCCAAATCTCAATCTACCCTaGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: KAQFWSLLGPNLNLP*SQRGLRQEVPRSLS
Trigger: AGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGGTAGATTGAGATTTGGACCTAATAGGCTCCAGAACTGTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCACTGCTACTTCTCCTaGGGGAGAACAGATTTGTGG +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAHCYFS*GRTDLW
Trigger: CCACAAATCTGTTCTCCCCCAGGAGAAGTAGCAGTG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTTATCACAGATGCAACTaGTTTATCATAGAGCACTCA +
Preference number: 2 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCYHRCN*FIIEHS
Trigger: TGAGTGCTCTATGATAAATCAGTTGCATCTGTGATA...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp CCCCGTGAAGATCTGCCTTTAAGAGCTTGGCCTGAATCATCTGTGGCTGCGTGTAGGCTGTATCTCTGCTaGTCTGGTTTAATGTCAAAG +
Preference number: 2 (lower is better)
Translates to: PREDLPLRAWPESSVAACRLYLC*SGLMSK
Trigger: CTTTGACATTAAACCAGAGCAGCAGAGATACAGCCT...ACACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAGATCTTCACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR CAA 90 bp TGCCTTAGACGGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTaGAACTTCTTCGCAGACCGTTCACTTGACCGAAGCTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: CLRRQRIHRSIVPFA*NFFADRSLDRSWNL
Trigger: CAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTGCCGTCTAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR-3UTR TCA 90 bp CCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTGACCGAAGCTGGAATTTGGAAATAATAGCCCCGTaGAGATCTGCCTTTAAGAGC +
Preference number: 2 (lower is better)
Translates to: PFALNFFADRSLDRSWNLEIIAP*RSAFKS
Trigger: GCTCTTAAAGGCAGATCTTCACGGGGCTATTATTTC...CAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR-3UTR TCA 90 bp GTCTGGCTTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTTCATGTTTGGATTTTGTCACTaGAATAATAGCCCCGTGAAG +
Preference number: 2 (lower is better)
Translates to: VWLEPTAQVPDVLFPEFMFGFCH*NNSPVK
Trigger: CTTCACGGGGCTATTATTTCAGTGACAAAATCCAAA...CATGAACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAAGCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR TCA 90 bp AATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTCATCGGTTTCCACAGTaGACACGCAGTTTAGCTTGG +
Preference number: 2 (lower is better)
Translates to: NSQVNRSLRFELLRRPFTHRFPQ*TRSLAW
Trigger: CCAAGCTAAACTGCGTGTTCACTGTGGAAACCGATG...AGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR-3UTR GCA 90 bp CCCCGTGAAGATCTGCCTTTAAGAGCTTGGCCTGAATCATCTGTGGCTGCGTGTAAAAGGCTGTATCTCTaGTGCTCTGGTTTAATGTCA +
Preference number: 2 (lower is better)
Translates to: PREDLPLRAWPESSVAACKRLYL*CSGLMS
Trigger: TGACATTAAACCAGAGCAGCAGAGATACAGCCTTTT...ACACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAGATCTTCACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR-3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGCTCTTCACTGAAAGGTaGACATTTAGGGAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: NILNSERHWLEVVYKWNWLFTER*TFRECP
Trigger: TGGACACTCCCTAAATGTCCACCTTTCAGTGAAGAG...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCTATCACAGATGCAACTaGTTTATCATAGAGCACTCA +
Preference number: 2 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSYHRCN*FIIEHS
Trigger: TGAGTGCTCTATGATAAATCAGTTGCATCTGTGATA...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTAAAGTAAACCTTAGGTaGGTCAGAGTTCCACCCAAA +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAKVNLR*VRVPPK
Trigger: TTTGGGTGGAACTCTGACCCACCTAAGGTTTACTTT...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTTTTCAGCAGCAAAAATaGCGAAGATATCAAAGGGCG +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAFQQQK*RRYQRA
Trigger: CGCCCTTTGATATCTTCGCCATTTTTGCTGCTGAAA...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCTCAAAGCACAGTTCTaGAGCCTATTAGGTCCAAAT +
Preference number: 2 (lower is better)
Translates to: FQMAGGIDATSHSRQGFALKAQF*SLLGPN
Trigger: ATTTGGACCTAATAGGCTCCAGAACTGTGCTTTGAG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCTTCACTGAAAGGTaGACATTTAGGGAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQLFTER*TFRECP
Trigger: TGGACACTCCCTAAATGTCCACCTTTCAGTGAAGAG...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGAGGTGGTCTATAAATaGAATTGGCTTAACTATCTC +
Preference number: 2 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAEVVYK*NWLNYL
Trigger: GAGATAGTTAAGCCAATTCCATTTATAGACCACCTC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATAATTCCTCTGTCCTCTaGCTTCTTCACTTAGTACGC +
Preference number: 2 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYNSSVL*LLHLVR
Trigger: GCGTACTAAGTGAAGAAGTCAGAGGACAGAGGAATT...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR GCA 90 bp AATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTACCGAAGCTGGAATTTaGTCCCGTAAATGTAGGAAA +
Preference number: 2 (lower is better)
Translates to: NSQVNRSLRFELLRRPFTTEAGI*SRKCRK
Trigger: TTTCCTACATTTACGGGAGCAAATTCCAGCTTCGGT...AGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR CAA 90 bp CCCTTCCCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTaGATCCCTGTTTATGTCCACATATGTACTGTATTATCACAGATG +
Preference number: 2 (lower is better)
Translates to: PFPFNLAGLQQYLLY*IPVYVHICTVLSQM
Trigger: CATCTGTGATAATACAGTACATATGTGGACATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGGGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR TCA 90 bp ATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTTTTGGATTTTGTCACTaGAATAATAGCCCCGTGAAG +
Preference number: 2 (lower is better)
Translates to: IHRSIVPFALNFFADRSLFGFCH*NNSPVK
Trigger: CTTCACGGGGCTATTATTTCAGTGACAAAATCCAAA...AAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR GCA 72 bp ACCACCGCCTTGCGCTGCAGCTGGTCCTCGCGGGCCTaGGGGCTCATGCGGGGCGTGCTGCGCTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: TTALRCSWSSRA*GLMRGVLRFRK
Trigger: CTTCCTGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR GCA 72 bp TGGCGGGTGAAGTACTCCAGGACCACCGCCTTGCGCTaGAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGG +
Preference number: 3 (lower is better)
Translates to: WRVKYSRTTALR*SWSSRACGLMR
Trigger: CCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTGGTCCTGGAGTACTTCACCCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR CCA 72 bp TTCAGTCCTCCATGGCTCAGCCTGGCAGCTCAGGAGTaGGCATGCTGCGGCAGGTCCCATCTCACTACGCTG +
Preference number: 3 (lower is better)
Translates to: FSPPWLSLAAQE*ACCGRSHLTTL
Trigger: CAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCACTCCTGAGCTGCCAGGCTGAGCCATGGAGGACTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 72 bp GGGGTGGTGGCACAGACCTGGGCCTTTCTACTCTCCTaGCACACAGCAGTCAGCGCTCCCACTTCCCTTCTC +
Preference number: 3 (lower is better)
Translates to: GVVAQTWAFLLS*HTAVSAPTSLL
Trigger: GAGAAGGGAAGTGGGAGCGCTGACTGCTGTGTGCCAGGAGAGTAGAAAGGCCCAGGTCTGTGCCACCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR GCA 72 bp CTGCTACTTCTCCTGGGGGAGAACAGATTTGTGGCCTaGCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGC +
Preference number: 3 (lower is better)
Translates to: LLLLLGENRFVA*LSPGGLLALPC
Trigger: GCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGGCAGGCCACAAATCTGTTCTCCCCCAGGAGAAGTAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 72 bp AGTGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTaGGGCAACCATGCATGGGCACAGCTGCATGCAGTA +
Preference number: 3 (lower is better)
Translates to: SGHAAAGPISLR*GNHAWAQLHAV
Trigger: TACTGCATGCAGCTGTGCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 72 bp GCCGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTaGCTTTCTTCTTCTTCTCCTTGCGCTTGTGGCGGG +
Preference number: 3 (lower is better)
Translates to: AAAPSFAWQRGL*LSSSSPCACGG
Trigger: CCCGCCACAAGCGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR TCA 72 bp TGGCTTTCTTCTTCTTCTCCTTGCGCTTGTGGCGGGTaGAGTACTCCAGGACCACCGCCTTGCGCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: WLSSSSPCACGG*STPGPPPCAAA
Trigger: AGCTGCAGCGCAAGGCGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR CCA 72 bp ACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCTaGGGGAGAACAGATTTGTGGCCTGCCTTTCGCCAG +
Preference number: 3 (lower is better)
Translates to: TRNAKPWHCYFS*GRTDLWPAFRQ
Trigger: CTGGCGAAAGGCAGGCCACAAATCTGTTCTCCCCCAGGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CAA 90 bp TGCGTGTCTGGCTTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTTTCTTCTCCTTGCGCTaGTGGCGGGTGAAGTACTCC +
Preference number: 3 (lower is better)
Translates to: CVSGLSPLHRSLMYCFQSFFSLR*WRVKYS
Trigger: GGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAA...ACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAAGCCAGACACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR GCA 72 bp CTCAGCGGGAAAGCAGGTAATAAAGGCAGCACATCCTaGACTTTGAACTGCATCCGTCTCATCCTGCAGCCA +
Preference number: 3 (lower is better)
Translates to: LSGKAGNKGSTS*TLNCIRLILQP
Trigger: TGGCTGCAGGATGAGACGGATGCAGTTCAAAGTGCAGGATGTGCTGCCTTTATTACCTGCTTTCCCGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CAA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCAATACCTCCTTTATTaGATCCCTGTTTATGTCCAC +
Preference number: 3 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCQYLLY*IPVYVH
Trigger: GTGGACATAAACAGGGATCAAATAAAGGAGGTATTG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR GCA 72 bp GGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTaGTCAGCGGGAAAGCAGGTAATAAAGGCAGCACAT +
Preference number: 3 (lower is better)
Translates to: GNRCHFPLKTGI*SAGKQVIKAAH
Trigger: ATGTGCTGCCTTTATTACCTGCTTTCCCGCTGAGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR TCA 72 bp TCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTaGCCGAAGCTGGAATTTGCTCCCGTAAATGTAGGA +
Preference number: 3 (lower is better)
Translates to: SLRFELLRRPFT*PKLEFAPVNVG
Trigger: TCCTACATTTACGGGAGCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR TCA 72 bp GGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTTaGACTTCTTCGCAGACCGTTCACTTGACCGAAGCT +
Preference number: 3 (lower is better)
Translates to: GKEFTGQSFPSL*TSSQTVHLTEA
Trigger: AGCTTCGGTCAAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR CCA 72 bp CCCATGTTGTTCAACATCCTCAACTCGGAGCGTCACTaGCTGGAGGTGGTCTATAAATGGAATTGGCTTAAC +
Preference number: 3 (lower is better)
Translates to: PMLFNILNSERH*LEVVYKWNWLN
Trigger: GTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTTGAACAACATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CAA 90 bp AACAACTGCCTTAGACGGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTTGAACACGCAGTTTAGCTaGGGGATAACTTTCAGGCGG +
Preference number: 3 (lower is better)
Translates to: NNCLRRQRIHRSIVPFALNTQFS*GITFRR
Trigger: CCGCCTGAAAGTTATCCCCAAGCTAAACTGCGTGTT...CAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTGCCGTCTAAGGCAGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR CCA 72 bp AACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATaGAATTGGCTTAACTATCTCTTCACTGAAAGGTGG +
Preference number: 3 (lower is better)
Translates to: NSERHWLEVVYK*NWLNYLFTERW
Trigger: CCACCTTTCAGTGAAGAGATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 72 bp TCAACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTaGTCTATAAATGGAATTGGCTTAACTATCTCTTCA +
Preference number: 3 (lower is better)
Translates to: STSSTRSVTGWR*SINGIGLTISS
Trigger: TGAAGAGATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 72 bp TGTTGTTCAACATCCTCAACTCGGAGCGTCACTGGCTaGAGGTGGTCTATAAATGGAATTGGCTTAACTATC +
Preference number: 3 (lower is better)
Translates to: CCSTSSTRSVTG*RWSINGIGLTI
Trigger: GATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTTGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CCA 72 bp GAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTaGCTTAACTATCTCTTCACTGAAAGGTGGACATTT +
Preference number: 3 (lower is better)
Translates to: ERHWLEVVYKWN*LNYLFTERWTF
Trigger: AAATGTCCACCTTTCAGTGAAGAGATAGTTAAGCCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR TCA 72 bp CTTAGCAACTCACCCTTCAATCCTCTTCAACCTTCCTaGAATAGCAAAGTAAACCTTAGGTGGGTCAGAGTT +
Preference number: 3 (lower is better)
Translates to: LSNSPFNPLQPS*NSKVNLRWVRV
Trigger: AACTCTGACCCACCTAAGGTTTACTTTGCTATTTCAGGAAGGTTGAAGAGGATTGAAGGGTGAGTTGCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR-3UTR CAA 90 bp AATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTTCAGGCGGTCTTCTTaGGTGATAATTTTGAAAATG +
Preference number: 3 (lower is better)
Translates to: NSQVNRSLRFELLRRPFTFRRSS*VIILKM
Trigger: CATTTTCAAAATTATCACCAAAGAAGACCGCCTGAA...AGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591061.5
3UTR CCA 72 bp AAATGGAATTGGCTTAACTATCTCTTCACTGAAAGGTaGACATTTAGGGAGTGTCCAGTTTTCAGCTGTCAT +
Preference number: 3 (lower is better)
Translates to: KWNWLNYLFTER*TFRECPVFSCH
Trigger: ATGACAGCTGAAAACTGGACACTCCCTAAATGTCCACCTTTCAGTGAAGAGATAGTTAAGCCAATTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CACCGCCTTGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTGCCTTGCGCTGCAGCTaGTCCTCGCGGGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: HRLALQLVLAGLRAHAGRALRCS*SSRACG
Trigger: CCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGC...ACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR GCA 90 bp TTGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTGCTGCGCGGCTCATGCGGGGCGTaGTGCGCTTCAGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRCSWSSRACGLMRGVLRGSCGA*CASGRP
Trigger: GGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCC...GCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp CCACCGCCTTGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTGCGCTTGTGGCGGGTaGAGTACTCCAGGACCACCG +
Preference number: 4 (lower is better)
Translates to: PPPCAAAGPRGPAGSCGACACGG*STPGPP
Trigger: CGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCA...CGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp CCACCGCCTTGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGCTCCCTGCCAAGAACTaGCCTGGACATCGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PPPCAAAGPRGPAGSCGALPAKN*PGHRSH
Trigger: ATGACTCCGATGTCCAGGTCAGTTCTTGGCAGGGAG...CGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR GCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCGGGCCTGCGGGCTCATaGGGGGCGTGCTGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGGPAGS*GACCAS
Trigger: TGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCC...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGCCTTGCGCTGCAGCTaGTCCTCGCGGGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLALRCS*SSRACG
Trigger: CCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR GCA 90 bp TTCTCCTTGCGCTTGTGGCGGGTGAAGTACTCCAGGACCACCGCCTTGCGCTGCGGGCCTGCGGGCTCATaGGGGGCGTGCTGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: FSLRLWRVKYSRTTALRCGPAGS*GACCAS
Trigger: TGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCC...GCAGCGCAAGGCGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR GCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGGTAGGCTGGTCCCCTaGCCCGCTCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLGRLVP*PALTAA
Trigger: GGCTGCAGTGAGAGCGGGGCAGGGGACCAGCCTACC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGGCTCATGCGGGGCGTaGTGCGCTTCAGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLGSCGA*CASGRP
Trigger: GGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCGGCCCGTGTCCGAGGTaGCAGTGTGCTTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGGPCPR*QCAWAP
Trigger: TGGAGCCCAAGCACACTGCCACCTCGGACACGGGCC...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGCTGCGTGTCTGGCTTaGGCCCACTGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLAACLA*AHCTGP
Trigger: GGGACCTGTGCAGTGGGCTCAAGCCAGACACGCAGC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTGGTCCTCGCGGGCCTaGGGGCTCATGCGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RSSLLCLAERPLAFFFFSWSSRA*GLMRGV
Trigger: CACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCA...GGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCTGGCCTTGCCTTGCTaGTCGGCAGAGACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLLALPC*SAETCS
Trigger: GGAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCTTGGGGGAGAGCACTTaGGCTGCCTCAGAACACCCT +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGLGEST*AASEHP
Trigger: AGGGTGTTCTGAGGCAGCTCAAGTGCTCTCCCCCAA...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCATGGGCACAGCTGCATaGAGTACTCTGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGMGTAA*STLLLG
Trigger: CCCCAGGAGCAGAGTACTGCATGCAGCTGTGCCCAT...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGAGGGCTCCTGGCCTTaGCTTGCTGATCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLEGSWP*LADRQR
Trigger: TCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGCTGCGTGTCTGGCTTaGGCCCACTGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCAACLA*AHCTGP
Trigger: GGGACCTGTGCAGTGGGCTCAAGCCAGACACGCAGC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CACCGCCTTGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTCTCTTTCTGAGACAATaGATGGTAGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: HRLALQLVLAGLRAHAGRLFLRQ*MVDHTL
Trigger: AAGAGTGTGATCTACCATGCATTGTCTCAGAAAGAG...ACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR GCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCGTGTTAACCCCGGTGTaGTTCCTGCCAGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGVLTPV*FLPVCS
Trigger: GGAACAGACTGGCAGGAAGCACACCGGGGTTAACAC...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCAACAGATTTGTGGCCTaGCTTTCGCCAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGNRFVA*LSPGGL
Trigger: GAGCCCTCCTGGCGAAAGGCAGGCCACAAATCTGTT...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCCATGTGCCTAGCCCGTaGGTGTGTTCATCACTGGCA +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGHVPSP*VCSSLA
Trigger: TGCCAGTGATGAACACACGCACGGGCTAGGCACATG...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCTCCGAGGTGGCAGTGTaGTTGGGCTCCATGTGCCTA +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLSEVAV*LGSMCL
Trigger: TAGGCACATGGAGCCCAAGCACACTGCCACCTCGGA...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGTGGTCCTCGCGGGCCTaGGGGCTCATGCGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAWSSRA*GLMRGV
Trigger: CACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCA...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCCTTTCAGTCCTCCATaGCTCAGCCTGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLPFSPP*LSLAAQ
Trigger: CTGAGCTGCCAGGCTGAGCCATGGAGGACTGAAAGG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGGGCGTCAATGCTGCTaGCTTGGCTTTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLGRQCC*LGFCSR
Trigger: CCTGCTGCAAAAGCCAAGCCAGCAGCATTGACGCCC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCATGCATGGGCACAGCTaGATGCAGTACTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGMHGHS*MQYSAP
Trigger: AGGAGCAGAGTACTGCATGCAGCTGTGCCCATGCAT...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGCTCAGGAGTGGGCATaGTGCGGCAGGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCAQEWA*CGRSHL
Trigger: GAGATGGGACCTGCCGCAGCATGCCCACTCCTGAGC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCGGCCTGAATCATCTGTaGCTGCGTGTCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLGLNHL*LRVWLE
Trigger: CTCAAGCCAGACACGCAGCCACAGATGATTCAGGCC...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCGCAGACCGTTCACTTaGCCGAAGCTGGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLRRPFT*PKLEFA
Trigger: AGCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCTCGTTCCCTTCGCTTTaGACTTCTTCGCAGACCGTT +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGSFPSL*TSSQTV
Trigger: AACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGA...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCCCGTGAAGATCTGCCTTTAAGAGCTTGGCCTGAATCATCTGTGGCTGCGTGTGGCCCGCTGTGCTCCTaGAGGCTCTGTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PREDLPLRAWPESSVAACGPLCS*RLCCSW
Trigger: CCAGGAGCAACAGAGCCTTCAGGAGCACAGCGGGCC...ACACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAGATCTTCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR GCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCATGCATGGGCACAGCTaGATGCAGTACTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLMHGHS*MQYSAP
Trigger: AGGAGCAGAGTACTGCATGCAGCTGTGCCCATGCAT...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTACGCTGGGGCAACCATaGATGGGCACAGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCTLGQP*MGTAAC
Trigger: GCATGCAGCTGTGCCCATGCATGGTTGCCCCAGCGT...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCGCAGCTCCCTCCTTTaGCTGGCAGAGAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCRSSLL*LAERPL
Trigger: CAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR GCA 90 bp CGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCCGCAGCTCCCTCCTTTaGCTGGCAGAGAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RSSLLCLAERPLAFFFFSRSSLL*LAERPL
Trigger: CAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG...GGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCCTGGCAGCTCAGGAGTaGGCATGCTGCGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSLAAQE*ACCGRS
Trigger: GGACCTGCCGCAGCATGCCCACTCCTGAGCTGCCAG...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCAAGTCTGTCTTCCTGTaGCAGATGAGGACGGCCACA +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLKSVFL*QMRTAT
Trigger: TGTGGCCGTCCTCATCTGCCACAGGAAGACAGACTT...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCTTTAAGAGCTTGGCCTaGATCATCTGTGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLFKSLA*IICGCV
Trigger: CACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAA...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCATCGGTTTCCACAGTaGACACGCAGTTTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLHRFPQ*TRSLAW
Trigger: CCAAGCTAAACTGCGTGTTCACTGTGGAAACCGATG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCTGCATGGAAGGGCCTaGCCCACTGGCTTTACAGAC +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCLHGRA*PTGFTD
Trigger: GTCTGTAAAGCCAGTGGGTCAGGCCCTTCCATGCAG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGGCCCGCTGTGCTCCTaGAGGCTGGACATCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAGPLCS*RLDIGV
Trigger: GACTCCGATGTCCAGCCTTCAGGAGCACAGCGGGCC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR GCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGCTCAGGAGTGGGCATaGTGCGGCAGGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSAQEWA*CGRSHL
Trigger: GAGATGGGACCTGCCGCAGCATGCCCACTCCTGAGC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp GTCTGGCTTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTTCATGTCATGCGGGGCGTGCTaGGCTTCAGGAAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VWLEPTAQVPDVLFPEFMSCGAC*ASGRPS
Trigger: TGAGGGCCTTCCTGAAGCGCAGCACGCCCCGCATGA...CATGAACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAAGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CCA 90 bp CCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTTGCGCTCTGTGGCTGCGTGTCTaGCTTGAGCCCACTGCACAG +
Preference number: 4 (lower is better)
Translates to: PSFAWQRGLWLSSSSPCALWLRV*LEPTAQ
Trigger: CTGTGCAGTGGGCTCAAGCCAGACACGCAGCCACAG...AGCGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGGGTGCACTGAGCTTTaGGGAGGGGTGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSGCTEL*GGVVAQ
Trigger: CTGTGCCACCACCCCTCCCCAAAGCTCAGTGCACCC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCTGGCAGAGAGGCCTTTaGCTTTCTTCTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGWQRGL*LSSSSP
Trigger: AGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCA...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR TCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCTGCGCTTGTGGCGGGTaGAGTACTCCAGGACCACCG +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSCACGG*STPGPP
Trigger: CGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCA...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGCATCCGTCTCATCCTaGAGCCACCCTGTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCASVSS*SHPVAQ
Trigger: TTGAGCTACAGGGTGGCTGCAGGATGAGACGGATGC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCTGCCTTTAAGAGCTTaGCCTGAATCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLLPLRA*PESSVA
Trigger: AGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGCTGGCAGCTCAGGAGTaGGCATGCTGCGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWLAAQE*ACCGRS
Trigger: GGACCTGCCGCAGCATGCCCACTCCTGAGCTGCCAG...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGACCCATCTGGTAGGCTaGTCCCCTGCCCCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGATHLVG*SPAPLS
Trigger: TGAGAGCGGGGCAGGGGACCAGCCTACCAGATGGGT...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGCGCCAGGAGGGCTCCTaGCCTTGCCTTGCTGATCGG +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWRQEGS*PCLADR
Trigger: CCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCG...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGAGCTTTGGGGAGGGGTaGTGGCACAGACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGASFGEG*WHRPGP
Trigger: AGGCCCAGGTCTGTGCCACCACCCCTCCCCAAAGCT...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGGGTGCACTGAGCTTTaGGGAGGGGTGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAGCTEL*GGVVAQ
Trigger: CTGTGCCACCACCCCTCCCCAAAGCTCAGTGCACCC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGGGCCCGTGTCCGAGGTaGCAGTGTGCTTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWGPCPR*QCAWAP
Trigger: TGGAGCCCAAGCACACTGCCACCTCGGACACGGGCC...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTTTCTCCTTGCGCTTGTaGCGGGTGAAGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCFSLRL*RVKYSR
Trigger: CCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAA...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
3UTR CAA 72 bp GAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTTGCGCTaGTGGCGGGTGAAGTACTCCAGGACCACCGCCTTG +
Preference number: 4 (lower is better)
Translates to: ERPLAFFFFSLR*WRVKYSRTTAL
Trigger: CAAGGCGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR CAA 72 bp CTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTaGCGCTTGTGGCGGGTGAAGTACTCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: LAERPLAFFFFS*RLWRVKYSRTT
Trigger: GGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTATCTCAATCTACCCTTaGGTCAGCGAGGCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCISIYP*VSEALG
Trigger: GCCTAAGGCCTCGCTGACTCAAGGGTAGATTGAGAT...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGCACATCCTGCACTTTaGACTGCATCCGTCTCATCC +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCAHPAL*TASVSS
Trigger: GGATGAGACGGATGCAGTTCAAAGTGCAGGATGTGC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TCCACAGTGAACACGCAGTTTAGCTTGGGGATAACTTTCAGGCGGTCTTCTTTGGGCCCGCTGTGCTCCTaGAGGCTGGACATCGGAGTC +
Preference number: 4 (lower is better)
Translates to: STVNTQFSLGITFRRSSLGPLCS*RLDIGV
Trigger: GACTCCGATGTCCAGCCTTCAGGAGCACAGCGGGCC...CAAAGAAGACCGCCTGAAAGTTATCCCCAAGCTAAACTGCGTGTTCACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGGCTGGGGGAATAGATaGCACTTCCCACTCAAGACA +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCGWGNR*HFPLKT
Trigger: TGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGCTGTGGCTGCGTGTCTaGCTTGAGCCCACTGCACAG +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGALWLRV*LEPTAQ
Trigger: CTGTGCAGTGGGCTCAAGCCAGACACGCAGCCACAG...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCCTCTTCACTGAAAGGTaGACATTTAGGGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLLFTER*TFRECP
Trigger: TGGACACTCCCTAAATGTCCACCTTTCAGTGAAGAG...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCCCTTTCAGTCCTCCATaGCTCAGCCTGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSPFSPP*LSLAAQ
Trigger: CTGAGCTGCCAGGCTGAGCCATGGAGGACTGAAAGG...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTACCCATCTGGTAGGCTaGTCCCCTGCCCCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFATHLVG*SPAPLS
Trigger: TGAGAGCGGGGCAGGGGACCAGCCTACCAGATGGGT...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCTGTTTCTCTCTGGTGTaGTTTGGGTGGAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: PFARRAPGLALLIGRDLLCFSLV*FGWKLP
Trigger: TGGTAACTTCCACCCAAACCACACCAGAGAGAAACA...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTAGCTTTGGGGAGGGGTaGTGGCACAGACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFASFGEG*WHRPGP
Trigger: AGGCCCAGGTCTGTGCCACCACCCCTCCCCAAAGCT...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGGACACTTGCATGGATaGAAGCAGGACCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSGHLHG*KQDRGT
Trigger: GGTGCCTCGGTCCTGCTTCCATCCATGCAAGTGTCC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTAAGTCTGTCTTCCTGTaGCAGATGAGGACGGCCACA +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCKSVFL*QMRTAT
Trigger: TGTGGCCGTCCTCATCTGCCACAGGAAGACAGACTT...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCCTCAAAGCACAGTTCTaGAGCCTATTAGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGLKAQF*SLLGPN
Trigger: ATTTGGACCTAATAGGCTCCAGAACTGTGCTTTGAG...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGCTCCCTCCTTTGCCTaGCAGAGAGGCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSAPSFA*QRGLWL
Trigger: AAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp TTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTTCATGGAGAGGGGCTCCCTCCTTTGCCTaGCAGAGAGGCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSPLHRSLMYCFQSSWRGAPSFA*QRGLWL
Trigger: AAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGC...CCCTCTCCATGAACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CCA 90 bp CGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTGCCAAGAACTGACCTaGACATCGGAGTCATTCGCC +
Preference number: 4 (lower is better)
Translates to: RSSLLCLAERPLAFFFFSCQELT*TSESFA
Trigger: GGCGAATGACTCCGATGTCCAGGTCAGTTCTTGGCA...GGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCCTGCATGGAAGGGCCTaGCCCACTGGCTTTACAGAC +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSLHGRA*PTGFTD
Trigger: GTCTGTAAAGCCAGTGGGTCAGGCCCTTCCATGCAG...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGCCGTGTTGGTCCCTGTaGGACTCTGGGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWPCWSL*DSGCTE
Trigger: CTCAGTGCACCCAGAGTCTCACAGGGACCAACACGG...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCCGTGTTGGTCCCTGTaGGACTCTGGGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAPCWSL*DSGCTE
Trigger: CTCAGTGCACCCAGAGTCTCACAGGGACCAACACGG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCGCACCTATTTGGTTATaGACACAGCATTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGAPIWL*TQHFQM
Trigger: CATCTGAAAATGCTGTGTTCATAACCAAATAGGTGC...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGACGCTGGGGCAACCATaGATGGGCACAGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWTLGQP*MGTAAC
Trigger: GCATGCAGCTGTGCCCATGCATGGTTGCCCCAGCGT...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATGGTAGGCTGGTCCCCTaGCCCGCTCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYGRLVP*PALTAA
Trigger: GGCTGCAGTGAGAGCGGGGCAGGGGACCAGCCTACC...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGGAGGGCTCCTGGCCTTaGCTTGCTGATCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWEGSWP*LADRQR
Trigger: TCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTC...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGCAAAGCCCTGGCACTaGTACTTCTCCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAAKPWH*YFSWGR
Trigger: TCTCCCCCAGGAGAAGTAGCAGTGCCAGGGCTTTGC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCTCCGAGGTGGCAGTGTaGTTGGGCTCCATGTGCCTA +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSSEVAV*LGSMCL
Trigger: TAGGCACATGGAGCCCAAGCACACTGCCACCTCGGA...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCTCAAGACAGGGATTTaGTCAGCGGGAAAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCLKTGI*SAGKQV
Trigger: TACCTGCTTTCCCGCTGAGCAAATCCCTGTCTTGAG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGCCCATCTCACTACGCTaGGGCAACCATGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAPISLR*GNHAWA
Trigger: TGCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGG...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCCCGTGAAGATCTGCCTTTAAGAGCTTGGCCTGAATCATCTGTGGCTGCGTGTAGGCTCTGTTGCTCCTaGACTCCCTGCCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: PREDLPLRAWPESSVAACRLCCS*TPCQEL
Trigger: CAGTTCTTGGCAGGGAGTCCAGGAGCAACAGAGCCT...ACACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAGATCTTCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAATCTCACCTCGGGAGGTaGTGCCGGGCGACCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQSHLGR*CRATSF
Trigger: AAAGGAGGTCGCCCGGCATCACCTCCCGAGGTGAGA...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCTCAGAACACCCTGGTaGGCGGAGGACACTTGCATG +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFALRTPW*AEDTCM
Trigger: CATGCAAGTGTCCTCCGCTCACCAGGGTGTTCTGAG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGTTGGGGGAGAGCACTTaGGCTGCCTCAGAACACCCT +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWLGEST*AASEHP
Trigger: AGGGTGTTCTGAGGCAGCTCAAGTGCTCTCCCCCAA...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTTGCTTGGGCTCCATGTaGCTAGCCCGTGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFACLGSM*LARACV
Trigger: AACACACGCACGGGCTAGGCACATGGAGCCCAAGCA...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGCATCCGTCTCATCCTaGAGCCACCCTGTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAASVSS*SHPVAQ
Trigger: TTGAGCTACAGGGTGGCTGCAGGATGAGACGGATGC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGGACGCCTTTTACATTaGAGAGGGGCGGGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAGRLLH*RGAGKS
Trigger: GCTCTTACCCGCCCCTCTGCAATGTAAAAGGCGTCC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCGGCTTTACAGACACATaGTCACAGAGGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSGFTDT*SQRARV
Trigger: GACCCTGGCCCTCTGTGACCATGTGTCTGTAAAGCC...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCGGGAGAACAGATTTGTaGCCTGCCTTTCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSGRTDL*PAFRQE
Trigger: CTCCTGGCGAAAGGCAGGCCACAAATCTGTTCTCCC...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGGGAGAACAGATTTGTaGCCTGCCTTTCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAGRTDL*PAFRQE
Trigger: CTCCTGGCGAAAGGCAGGCCACAAATCTGTTCTCCC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGCCTTTCTACTCTCCTaGCACACAGCAGTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAAFLLS*HTAVSA
Trigger: AGCGCTGACTGCTGTGTGCCAGGAGAGTAGAAAGGC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGGGACACTTGCATGGATaGAAGCAGGACCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWGHLHG*KQDRGT
Trigger: GGTGCCTCGGTCCTGCTTCCATCCATGCAAGTGTCC...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 72 bp GGGAAAGCAGGTAATAAAGGCAGCACATCCTGCACTTaGAACTGCATCCGTCTCATCCTGCAGCCACCCTGT +
Preference number: 4 (lower is better)
Translates to: GKAGNKGSTSCT*NCIRLILQPPC
Trigger: ACAGGGTGGCTGCAGGATGAGACGGATGCAGTTCAAAGTGCAGGATGTGCTGCCTTTATTACCTGCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCCCGTGAAGATCTGCCTTTAAGAGCTTGGCCTGAATCATCTGTGGCTGCGTGTCACTGCACAGGTCCCTaGTGTACTGTTTCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PREDLPLRAWPESSVAACHCTGP*CTVSRV
Trigger: AACTCTGGAAACAGTACATCAGGGACCTGTGCAGTG...ACACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAGATCTTCACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGAAATAATAGCCCCGTaGAGATCTGCCTTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCEIIAP*RSAFKS
Trigger: GCTCTTAAAGGCAGATCTTCACGGGGCTATTATTTC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCTCGTTCCCTTCGCTTTaGACTTCTTCGCAGACCGTT +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSSFPSL*TSSQTV
Trigger: AACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGA...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTGGCCTTGCCTTGCTaGTCGGCAGAGACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQLALPC*SAETCS
Trigger: GGAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAG...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGCACATCCTGCACTTTaGACTGCATCCGTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAAHPAL*TASVSS
Trigger: GGATGAGACGGATGCAGTTCAAAGTGCAGGATGTGC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTGTGTTAACCCCGGTGTaGTTCCTGCCAGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAVLTPV*FLPVCS
Trigger: GGAACAGACTGGCAGGAAGCACACCGGGGTTAACAC...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGAAAGGGCGTCAATGCTaGTGGCTTGGCTTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAKGRQC*WLGFCS
Trigger: GCTGCAAAAGCCAAGCCAGCAGCATTGACGCCCTTT...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGAACAGATTTGTGGCCTaGCTTTCGCCAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWNRFVA*LSPGGL
Trigger: GAGCCCTCCTGGCGAAAGGCAGGCCACAAATCTGTT...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATTCATGCGGGGCGTGCTaGGCTTCAGGAAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYSCGAC*ASGRPS
Trigger: TGAGGGCCTTCCTGAAGCGCAGCACGCCCCGCATGA...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGGAAAAGGCTGTATCTaGACATCGGAGTCATTCGCC +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSGKGCI*TSESFA
Trigger: GGCGAATGACTCCGATGTCCAGATACAGCCTTTTCC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221770.7
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGCCCTTTCAACCTGGCTaGACTGCAGCAATACCTCCT +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAPFQPG*TAAIPP
Trigger: AGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGGG...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCCATGGCTCAGCCTaGCAGCTCAGGAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQLHGSA*QLRSGH
Trigger: ATGCCCACTCCTGAGCTGCCAGGCTGAGCCATGGAG...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGAGAAACGCAAAGCCCTaGCACTGCTACTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGARNAKP*HCYFSW
Trigger: CCAGGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCT...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGTGTGCTCCTGAAGGCTaGACATCGGAGTCATTCGCC +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWCAPEG*TSESFA
Trigger: GGCGAATGACTCCGATGTCCAGCCTTCAGGAGCACA...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp CAGGTCCCTGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAAAAGGCTGTATTCTCCTTGCGCTTGTaGCGGGTGAAGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: QVPDVLFPEFMEREEKAVFSLRL*RVKYSR
Trigger: CCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAA...TACAGCCTTTTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCAGGGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCCATCGGTTTCCACAGTaGACACGCAGTTTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSHRFPQ*TRSLAW
Trigger: CCAAGCTAAACTGCGTGTTCACTGTGGAAACCGATG...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGATCTCAATCTACCCTTaGGTCAGCGAGGCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWISIYP*VSEALG
Trigger: GCCTAAGGCCTCGCTGACTCAAGGGTAGATTGAGAT...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAATGGGCACAGCTGCATaGAGTACTCTGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQMGTAA*STLLLG
Trigger: CCCCAGGAGCAGAGTACTGCATGCAGCTGTGCCCAT...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCATCAAAGGGCGTCAATaGTGCTGGCTTGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSIKGRQ*CWLGFC
Trigger: GCAAAAGCCAAGCCAGCAGCATTGACGCCCTTTGAT...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAGCAAAGCCCTGGCACTaGTACTTCTCCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQAKPWH*YFSWGR
Trigger: TCTCCCCCAGGAGAAGTAGCAGTGCCAGGGCTTTGC...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGTCCTGCACTTTGAACTaGATCCGTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGASCTLN*IRLILQ
Trigger: CTGCAGGATGAGACGGATGCAGTTCAAAGTGCAGGA...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCTCCTGCACTTTGAACTaGATCCGTCTCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSSCTLN*IRLILQ
Trigger: CTGCAGGATGAGACGGATGCAGTTCAAAGTGCAGGA...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGGGCTGGGGGAATAGATaGCACTTCCCACTCAAGACA +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWGWGNR*HFPLKT
Trigger: TGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCC...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCAGGCTGTATCTCTGCTaGTCTGGTTTAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RSSLLCLAERPLAFFFFSRLYLC*SGLMSK
Trigger: CTTTGACATTAAACCAGAGCAGCAGAGATACAGCCT...GGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATCTGTGGCTGCGTGTCTaGCTTGAGCCCACTGCACAG +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYLWLRV*LEPTAQ
Trigger: CTGTGCAGTGGGCTCAAGCCAGACACGCAGCCACAG...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGTCACTGGCTGGAGGTaGTCTATAAATGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSVTGWR*SINGIG
Trigger: GCCAATTCCATTTATAGACCACCTCCAGCCAGTGAC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCCTTCCCTTTCAACCTaGCTGGACTGCAGCAATACC +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAPSLST*LDCSNT
Trigger: GGTATTGCTGCAGTCCAGCCAGGTTGAAAGGGAAGG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGCACTGCTACTTCTCCTaGGGGAGAACAGATTTGTGG +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAHCYFS*GRTDLW
Trigger: CCACAAATCTGTTCTCCCCCAGGAGAAGTAGCAGTG...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCCTGGTGTGGTTTGGGTaGAAGTTACCAGAAACGCAA +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSLVWFG*KLPETQ
Trigger: TTGCGTTTCTGGTAACTTCCACCCAAACCACACCAG...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGCATTTTCAGATGGCTaGGGGAATAGATGCCACTTC +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSAFSDG*GNRCHF
Trigger: GAAGTGGCATCTATTCCCCCAGCCATCTGAAAATGC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 72 bp TTCTGGAGCCTATTAGGTCCAAATCTCAATCTACCCTaGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: FWSLLGPNLNLP*SQRGLRQEVPR
Trigger: TCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGGTAGATTGAGATTTGGACCTAATAGGCTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGCACTGCACAGGTCCCTaGTGTACTGTTTCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWHCTGP*CTVSRV
Trigger: AACTCTGGAAACAGTACATCAGGGACCTGTGCAGTG...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCACTGCACAGGTCCCTaGTGTACTGTTTCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAHCTGP*CTVSRV
Trigger: AACTCTGGAAACAGTACATCAGGGACCTGTGCAGTG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTTTTAAGAGCTTGGCCTaGATCATCTGTGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAFKSLA*IICGCV
Trigger: CACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAA...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp GTGTCTGGCTTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTTCAGAAATAATAGCCCCGTaGAGATCTGCCTTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: VSGLSPLHRSLMYCFQSSEIIAP*RSAFKS
Trigger: GCTCTTAAAGGCAGATCTTCACGGGGCTATTATTTC...TGAACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAAGCCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp CGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTTTGGATTTTGTCACTaGAATAATAGCCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: RSSLLCLAERPLAFFFFSFGFCH*NNSPVK
Trigger: CTTCACGGGGCTATTATTTCAGTGACAAAATCCAAA...GGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR GCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATTGCTGGCTTGGCTTTTaGAGCAGGTCTCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYCWLGF*SRSHLG
Trigger: CCCGAGGTGAGACCTGCTGCAAAAGCCAAGCCAGCA...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATTGCTTGGGCTCCATGTaGCTAGCCCGTGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYCLGSM*LARACV
Trigger: AACACACGCACGGGCTAGGCACATGGAGCCCAAGCA...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAGGACGCCTTTTACATTaGAGAGGGGCGGGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQGRLLH*RGAGKS
Trigger: GCTCTTACCCGCCCCTCTGCAATGTAAAAGGCGTCC...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCAAAAGGCTGTATCTCTaGTGCTCTGGTTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: RSSLLCLAERPLAFFFFSKRLYL*CSGLMS
Trigger: TGACATTAAACCAGAGCAGCAGAGATACAGCCTTTT...GGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGCTGCCTTTAAGAGCTTaGCCTGAATCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGALPLRA*PESSVA
Trigger: AGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAG...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAGGCTTTACAGACACATaGTCACAGAGGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQGFTDT*SQRARV
Trigger: GACCCTGGCCCTCTGTGACCATGTGTCTGTAAAGCC...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGCTGGTGTGGTTTGGGTaGAAGTTACCAGAAACGCAA +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGALVWFG*KLPETQ
Trigger: TTGCGTTTCTGGTAACTTCCACCCAAACCACACCAG...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCCTCTCTGGTGTGGTTTaGGTGGAAGTTACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSLSGVV*VEVTRN
Trigger: GTTTCTGGTAACTTCCACCCAAACCACACCAGAGAG...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp AATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTGTGCTCCTGAAGGCTaGACATCGGAGTCATTCGCC +
Preference number: 4 (lower is better)
Translates to: NSQVNRSLRFELLRRPFTCAPEG*TSESFA
Trigger: GGCGAATGACTCCGATGTCCAGCCTTCAGGAGCACA...AGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGTATCTCTGCTGCTCTaGTTTAATGTCAAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSVSLLL*FNVKEP
Trigger: CGGCTCTTTGACATTAAACCAGAGCAGCAGAGATAC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp GTCTGGCTTGAGCCCACTGCACAGGTCCCTGATGTACTGTTTCCAGAGTTCATGGTATCTCTGCTGCTCTaGTTTAATGTCAAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: VWLEPTAQVPDVLFPEFMVSLLL*FNVKEP
Trigger: CGGCTCTTTGACATTAAACCAGAGCAGCAGAGATAC...CATGAACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGGGCTCAAGCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
3UTR CAA 72 bp CGGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTaGAACTTCTTCGCAGACCGTTCACTTGACCGAAGC +
Preference number: 4 (lower is better)
Translates to: RQRIHRSIVPFA*NFFADRSLDRS
Trigger: GCTTCGGTCAAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR TCA 90 bp GTCCCTGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAAAAGGCTGTATCTTTTAAGAGCTTGGCCTaGATCATCTGTGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: VPDVLFPEFMEREEKAVSFKSLA*IICGCV
Trigger: CACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAA...AGATACAGCCTTTTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR TCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGAAATAATAGCCCCGTaGAGATCTGCCTTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAEIIAP*RSAFKS
Trigger: GCTCTTAAAGGCAGATCTTCACGGGGCTATTATTTC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TTCGCTTTGAACTTCTTCGCAGACCGTTCACTTGACCGAAGCTGGAATTTGCTCCATCGGTTTCCACAGTaGACACGCAGTTTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FALNFFADRSLDRSWNLLHRFPQ*TRSLAW
Trigger: CCAAGCTAAACTGCGTGTTCACTGTGGAAACCGATG...GAGCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR TCA 90 bp AACAACTGCCTTAGACGGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTTGCGCAGACCGTTCACTTaGCCGAAGCTGGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: NNCLRRQRIHRSIVPFALRRPFT*PKLEFA
Trigger: AGCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCG...CAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTGCCGTCTAAGGCAGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR TCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGAATTCCTCTGTCCTCTaGCTTCTTCACTTAGTACGC +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGANSSVL*LLHLVR
Trigger: GCGTACTAAGTGAAGAAGTCAGAGGACAGAGGAATT...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCACCGAAGCTGGAATTTaGTCCCGTAAATGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSTEAGI*SRKCRK
Trigger: TTTCCTACATTTACGGGAGCAAATTCCAGCTTCGGT...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCTCAACCTGGCTGGACTaGAGCAATACCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSSTWLD*SNTSFI
Trigger: AATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGA...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATCATGTGCCTAGCCCGTaGGTGTGTTCATCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYHVPSP*VCSSLA
Trigger: TGCCAGTGATGAACACACGCACGGGCTAGGCACATG...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGAAAGGCAGCACATCCTaGACTTTGAACTGCATCCGT +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWKGSTS*TLNCIR
Trigger: ACGGATGCAGTTCAAAGTGCAGGATGTGCTGCCTTT...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCCTCTTCACTGAAAGGTaGACATTTAGGGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSLFTER*TFRECP
Trigger: TGGACACTCCCTAAATGTCCACCTTTCAGTGAAGAG...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGAGGTGGTCTATAAATaGAATTGGCTTAACTATCTC +
Preference number: 4 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCEVVYK*NWLNYL
Trigger: GAGATAGTTAAGCCAATTCCATTTATAGACCACCTC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCGTCTGTTCCTCCCCATaGGAGTCACACAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSVCSSP*ESHKMK
Trigger: TTTCATTTTGTGTGACTCCCATGGGGAGGAACAGAC...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCAAAGTAAACCTTAGGTaGGTCAGAGTTCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSKVNLR*VRVPPK
Trigger: TTTGGGTGGAACTCTGACCCACCTAAGGTTTACTTT...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATGCCTTTCTACTCTCCTaGCACACAGCAGTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYAFLLS*HTAVSA
Trigger: AGCGCTGACTGCTGTGTGCCAGGAGAGTAGAAAGGC...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGGCATTTTCAGATGGCTaGGGGAATAGATGCCACTTC +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWAFSDG*GNRCHF
Trigger: GAAGTGGCATCTATTCCCCCAGCCATCTGAAAATGC...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp AACAACTGCCTTAGACGGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTTGTCGTTCCCTTCGCTTTaGACTTCTTCGCAGACCGTT +
Preference number: 4 (lower is better)
Translates to: NNCLRRQRIHRSIVPFALSFPSL*TSSQTV
Trigger: AACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGA...CAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTGCCGTCTAAGGCAGTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR TCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGAATTCCTCTGTCCTCTaGCTTCTTCACTTAGTACGC +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWNSSVL*LLHLVR
Trigger: GCGTACTAAGTGAAGAAGTCAGAGGACAGAGGAATT...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp ATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTTTTAAGAGCTTGGCCTaGATCATCTGTGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: IHRSIVPFALNFFADRSLFKSLA*IICGCA
Trigger: AGCGCAGCCACAGATGATTCAGGCCAAGCTCTTAAA...AAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR GCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCAAGACAGGGATTTaGTCAGCGGGAAAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQLKTGI*SAGKQV
Trigger: TACCTGCTTTCCCGCTGAGCAAATCCCTGTCTTGAG...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCAGGCTGTATCTCTGCTaGTCTGGTTTAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSRLYLC*SGLMSK
Trigger: CTTTGACATTAAACCAGAGCAGCAGAGATACAGCCT...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp TCCCTGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAAAAGGCTGTATCTCCTGCCTTTAAGAGCTTaGCCTGAATCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLMYCFQSSWRGRKRLYLLPLRA*PESSVA
Trigger: AGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAG...GAGATACAGCCTTTTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATCGGAGCGTCACTGGCTaGAGGTGGTCTATAAATGGA +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYRSVTG*RWSING
Trigger: TCCATTTATAGACCACCTCCAGCCAGTGACGCTCCG...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAAACTCGGAGCGTCACTaGCTGGAGGTGGTCTATAAA +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQNSERH*LEVVYK
Trigger: TTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTT...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATCCCTTTCAACCTGGCTaGACTGCAGCAATACCTCCT +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYPFQPG*TAAIPP
Trigger: AGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGGG...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCAAAGTAAACCTTAGGTaGGTCAGAGTTCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSKVNLR*VRVPPK
Trigger: TTTGGGTGGAACTCTGACCCACCTAAGGTTTACTTT...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACACTGCTACTTCTCCTaGGGGAGAACAGATTTGTGG +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQHCYFS*GRTDLW
Trigger: CCACAAATCTGTTCTCCCCCAGGAGAAGTAGCAGTG...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTTGTTTCTCTCTGGTGTaGTTTGGGTGGAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFACFSLV*FGWKLP
Trigger: TGGTAACTTCCACCCAAACCACACCAGAGAGAAACA...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp TCCCTGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAAAAGGCTGTATCTCTGGCAGAGAGGCCTTTaGCTTTCTTCTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLMYCFQSSWRGRKRLYLWQRGL*LSSSSP
Trigger: AGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCA...GAGATACAGCCTTTTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR GCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCCTCTTTCTGAGACAATaGATGGTAGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSLFLRQ*MVDHTL
Trigger: AAGAGTGTGATCTACCATGCATTGTCTCAGAAAGAG...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGCTGTCATAAACAACTaGCTTAGACGGCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAAVINN*LRRQRI
Trigger: AATTCTTTGCCGTCTAAGGCAGTTGTTTATGACAGC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTCTGCCTTTAAGAGCTTaGCCTGAATCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QRIHRSIVPFALNFFADRLPLRA*PESSVA
Trigger: AGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAG...ACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR CCA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGAGGTGGTCTATAAATaGAATTGGCTTAACTATCTC +
Preference number: 4 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSEVVYK*NWLNYL
Trigger: GAGATAGTTAAGCCAATTCCATTTATAGACCACCTC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATAACTCGGAGCGTCACTaGCTGGAGGTGGTCTATAAA +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYNSERH*LEVVYK
Trigger: TTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTT...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGTTTCAGCAGCAAAAATaGCGAAGATATCAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: NILNSERHWLEVVYKWNWFQQQK*RRYQRA
Trigger: CGCCCTTTGATATCTTCGCCATTTTTGCTGCTGAAA...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTTTTGGATTTTGTCACTaGAATAATAGCCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAFGFCH*NNSPVK
Trigger: CTTCACGGGGCTATTATTTCAGTGACAAAATCCAAA...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTGGGAGTCACACAAAATaGAAATCTCCTAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAGSHTK*KSPRKR
Trigger: TCTCTTTCTAGGAGATTTTCATTTTGTGTGACTCCC...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCTATCACAGATGCAACTaGTTTATCATAGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSYHRCN*FIIEHS
Trigger: TGAGTGCTCTATGATAAATCAGTTGCATCTGTGATA...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTGCTGTCATAAACAACTaGCTTAGACGGCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAAVINN*LRRQRI
Trigger: AATTCTTTGCCGTCTAAGGCAGTTGTTTATGACAGC...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATCTTCACTTAGTACGCTaGGACCTTCCCATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYLHLVR*DLPMLF
Trigger: GAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAG...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAATCAACCTGGCTGGACTaGAGCAATACCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQSTWLD*SNTSFI
Trigger: AATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGA...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATGTCTGTTCCTCCCCATaGGAGTCACACAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYVCSSP*ESHKMK
Trigger: TTTCATTTTGTGTGACTCCCATGGGGAGGAACAGAC...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp AACAACTGCCTTAGACGGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTTGTTTGGATTTTGTCACTaGAATAATAGCCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: NNCLRRQRIHRSIVPFALFGFCH*NNSPVK
Trigger: CTTCACGGGGCTATTATTTCAGTGACAAAATCCAAA...CAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTGCCGTCTAAGGCAGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR TCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAGCACCTATTTGGTTATaGACACAGCATTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQAPIWL*TQHFQM
Trigger: CATCTGAAAATGCTGTGTTCATAACCAAATAGGTGC...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp ATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTCTCTTTCTGAGACAATaGATGGTAGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: IHRSIVPFALNFFADRSLLFLRQ*MVDHTL
Trigger: AAGAGTGTGATCTACCATGCATTGTCTCAGAAAGAG...AAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR GCA 90 bp ATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTGCTGTCATAAACAACTaGCTTAGACGGCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: IHRSIVPFALNFFADRSLAVINN*LRRQRI
Trigger: AATTCTTTGCCGTCTAAGGCAGTTGTTTATGACAGC...AAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR GCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAAAAAGGCTGTATCTCTaGTGCTCTGGTTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQKRLYL*CSGLMS
Trigger: TGACATTAAACCAGAGCAGCAGAGATACAGCCTTTT...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CCA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAGTATTTACACAACAGTaGACGCCTTTTACATTGCAG +
Preference number: 4 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQVFTQQ*TPFTLQ
Trigger: CTGCAATGTAAAAGGCGTCCACTGTTGTGTAAATAC...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATTTTGGATTTTGTCACTaGAATAATAGCCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYFGFCH*NNSPVK
Trigger: CTTCACGGGGCTATTATTTCAGTGACAAAATCCAAA...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR GCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATCTCTTTCTGAGACAATaGATGGTAGATCACACTCTT +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYLFLRQ*MVDHTL
Trigger: AAGAGTGTGATCTACCATGCATTGTCTCAGAAAGAG...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATGTATTTACACAACAGTaGACGCCTTTTACATTGCAG +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYVFTQQ*TPFTLQ
Trigger: CTGCAATGTAAAAGGCGTCCACTGTTGTGTAAATAC...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR TCA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATTATCACAGATGCAACTaGTTTATCATAGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYYHRCN*FIIEHS
Trigger: TGAGTGCTCTATGATAAATCAGTTGCATCTGTGATA...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
3UTR CAA 72 bp TTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTaGATCCCTGTTTATGTCCACATATGTACTGTATTA +
Preference number: 4 (lower is better)
Translates to: FNLAGLQQYLLY*IPVYVHICTVL
Trigger: TAATACAGTACATATGTGGACATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS GCA 90 bp GCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTGCTaGGCTTCAGGAAGGCCCTCACGAAGGCCTCGGCCCGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: AAAGPRGPAGSCGAC*ASGRPSRRPRPAVL
Trigger: GAGCACAGCGGGCCGAGGCCTTCGTGAGGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585603.6
ENST00000586136.5
ENST00000586420.5
ENST00000586823.5
ENST00000588551.5
ENST00000590688.1
ENST00000591824.5
ENST00000592759.5
CDS GCA 90 bp TGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTaGTGCGCTTCAGGAAGGCCCTCACGAAGGCCTCGGCCCGCTGTG +
Preference number: 5 (lower is better)
Translates to: CAAAGPRGPAGSCGA*CASGRPSRRPRPAV
Trigger: CACAGCGGGCCGAGGCCTTCGTGAGGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585603.6
ENST00000586136.5
ENST00000586420.5
ENST00000586823.5
ENST00000588551.5
ENST00000590688.1
ENST00000591824.5
ENST00000592759.5
CDS GCA 90 bp CCACCGCCTTGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATaGGGGGCGTGCTGCGCTTCAGGAAGGCCCTCACGAAGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: PPPCAAAGPRGPAGS*GACCASGRPSRRPR
Trigger: CCGAGGCCTTCGTGAGGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAAGGCGGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585603.6
ENST00000586136.5
ENST00000586420.5
ENST00000586823.5
ENST00000588551.5
ENST00000590688.1
ENST00000591824.5
ENST00000592759.5
CDS GCA 90 bp GCCTCGGCCCGCTGTGCTCCTGAAGGCTGCAGGCGGACAAGGGGGTaGGGCGCTCACTGCTCCGGTCTGGGCAGCCCAGGATCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ASARCAPEGCRRTRG*GAHCSGLGSPGSQA
Trigger: TGCCTGGGATCCTGGGCTGCCCAGACCGGAGCAGTGAGCGCCGCACCCCCTTGTCCGCCTGCAGCCTTCAGGAGCACAGCGGGCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS CCA 90 bp AAGGCTGCAGGCGGACAAGGGGGTGCGGCGCTCACTGCTCCGGTCTaGGCAGCCCAGGATCCCAGGCATCCCGCCCGCCATTCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: KAAGGQGGAALTAPV*AAQDPRHPARHSRQ
Trigger: CTGCCGGGAATGGCGGGCGGGATGCCTGGGATCCTGGGCTGCCCAGACCGGAGCAGTGAGCGCCGCACCCCCTTGTCCGCCTGCAGCCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS-3UTR CAA 90 bp TTGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTGCTGCGCGGCTGCGTGTCTGGCTaGAGCCCACTGCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: LRCSWSSRACGLMRGVLRGCVSG*SPLHRS
Trigger: GGACCTGTGCAGTGGGCTCAAGCCAGACACGCAGCC...GCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS TCA 90 bp GCGCTTCAGGAAGGCCCTCACGAAGGCCTCGGCCCGCTGTGCTCCTaGAGGCTGCAGGCGGACAAGGGGGTGCGGCGCTCACTGCTCCGG +
Preference number: 5 (lower is better)
Translates to: ALQEGPHEGLGPLCS*RLQADKGVRRSLLR
Trigger: CCGGAGCAGTGAGCGCCGCACCCCCTTGTCCGCCTGCAGCCTTCAGGAGCACAGCGGGCCGAGGCCTTCGTGAGGGCCTTCCTGAAGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS GCA 90 bp AGGAAGGCCCTCACGAAGGCCTCGGCCCGCTGTGCTCCTGAAGGCTaGAGGCGGACAAGGGGGTGCGGCGCTCACTGCTCCGGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: RKALTKASARCAPEG*RRTRGCGAHCSGLG
Trigger: GCCCAGACCGGAGCAGTGAGCGCCGCACCCCCTTGTCCGCCTGCAGCCTTCAGGAGCACAGCGGGCCGAGGCCTTCGTGAGGGCCTTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS-3UTR CAA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCGCTCCTGGCCTTGCCTaGCTGATCGGCAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGAPGLA*LIGRDL
Trigger: CAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGC...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCCTTGGGGGAGAGCACTaGAGCTGCCTCAGAACACCC +
Preference number: 5 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGLGGEH*SCLRTP
Trigger: GGGTGTTCTGAGGCAGCTCAAGTGCTCTCCCCCAAG...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TTCTCCTTGCGCTTGTGGCGGGTGAAGTACTCCAGGACCACCGCCTTGCGCTGCCCGCAGCTCCCTCCTTaGCCTGGCAGAGAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: FSLRLWRVKYSRTTALRCPQLPP*PGREAF
Trigger: AAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCGG...GCAGCGCAAGGCGGTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CAA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGGCTGCGTGTCTGGCTaGAGCCCACTGCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCGCVSG*SPLHRS
Trigger: GGACCTGTGCAGTGGGCTCAAGCCAGACACGCAGCC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS CCA 90 bp CCGCGGGCAGAAAGACGTGGGGAGCTCGGGTTACCTCTGCTGCTCTaGTTTAATGTCAAAGAGCCGCAGCTCCCTCCTTTGCCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: PRAERRGELGLPLLL*FNVKEPQLPPLPGR
Trigger: TCTGCCAGGCAAAGGAGGGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGGTAACCCGAGCTCCCCACGTCTTTCTGCCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS-3UTR CAA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTGAGGTGGCAGTGTGCTaGGGCTCCATGTGCCTAGCC +
Preference number: 5 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCEVAVC*GSMCLA
Trigger: GGCTAGGCACATGGAGCCCAAGCACACTGCCACCTC...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS GCA 90 bp AAGCACCGCGGGCAGAAAGACGTGGGGAGCTCGGGTTACCTCTGCTaGTCTGGTTTAATGTCAAAGAGCCGCAGCTCCCTCCTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: KHRGQKDVGSSGYLC*SGLMSKSRSSLLCL
Trigger: CAGGCAAAGGAGGGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGGTAACCCGAGCTCCCCACGTCTTTCTGCCCGCGGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS GCA 90 bp GGTAAGCACCGCGGGCAGAAAGACGTGGGGAGCTCGGGTTACCTCTaGTGCTCTGGTTTAATGTCAAAGAGCCGCAGCTCCCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: GKHRGQKDVGSSGYL*CSGLMSKSRSSLLC
Trigger: GCAAAGGAGGGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGGTAACCCGAGCTCCCCACGTCTTTCTGCCCGCGGTGCTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS-3UTR CAA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCTTGGGGGAGAGCACTaGAGCTGCCTCAGAACACCC +
Preference number: 5 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCLGGEH*SCLRTP
Trigger: GGGTGTTCTGAGGCAGCTCAAGTGCTCTCCCCCAAG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCAGCACATCCTGCACTTaGAACTGCATCCGTCTCATC +
Preference number: 5 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGSTSCT*NCIRLI
Trigger: GATGAGACGGATGCAGTTCAAAGTGCAGGATGTGCT...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTCTGATCGGCAGAGACTaGCTCCTCAAAGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCLIGRD*LLKGKG
Trigger: CCCCTTCCCTTTGAGGAGCAAGTCTCTGCCGATCAG...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCGACCGAGGCACCGTGTaGGTCCCTGTGAGACTCTGG +
Preference number: 5 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSDRGTV*VPVRLW
Trigger: CCAGAGTCTCACAGGGACCAACACGGTGCCTCGGTC...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCGACCGAGGCACCGTGTaGGTCCCTGTGAGACTCTGG +
Preference number: 5 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSDRGTV*VPVRLW
Trigger: CCAGAGTCTCACAGGGACCAACACGGTGCCTCGGTC...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTCGGAGCGGAGGTGGCAGTGTGCTaGGGCTCCATGTGCCTAGCC +
Preference number: 5 (lower is better)
Translates to: SLSTLRPSHVVQHPQLGAEVAVC*GSMCLA
Trigger: GGCTAGGCACATGGAGCCCAAGCACACTGCCACCTC...CGCTCCGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTTTCTTCTCCTTGCGCTaGTGGCGGGTGAAGTACTCC +
Preference number: 5 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCFFSLR*WRVKYS
Trigger: GGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAA...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CAA 90 bp CCCTTGAGTCAGCGAGGCCTTAGGCAAGAGGTCCCTCGAAGTCTGTCTTCCTGTTCGCAGACCGTTCACTaGACCGAAGCTGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: PLSQRGLRQEVPRSLSSCSQTVH*TEAGIC
Trigger: GCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGA...ACAGGAAGACAGACTTCGAGGGACCTCTTGCCTAAGGCCTCGCTGACTCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGCCGCAGCTCCCTCCTTaGCCTGGCAGAGAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: NILNSERHWLEVVYKWNWPQLPP*PGREAF
Trigger: AAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCGG...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS-3UTR CAA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTGCTCCTGGCCTTGCCTaGCTGATCGGCAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAAPGLA*LIGRDL
Trigger: CAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGC...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp CCCCGTGAAGATCTGCCTTTAAGAGCTTGGCCTGAATCATCTGTGGCTGCGTGTTTCTTCTCCTTGCGCTaGTGGCGGGTGAAGTACTCC +
Preference number: 5 (lower is better)
Translates to: PREDLPLRAWPESSVAACFFSLR*WRVKYS
Trigger: GGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAA...ACACGCAGCCACAGATGATTCAGGCCAAGCTCTTAAAGGCAGATCTTCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CAA 90 bp GGCTTTCTTCTTCTTCTCCTTGCGCTTGTGGCGGGTGAAGTACTCCAGGACCACTTCTTCTTCTTCTCCTaGCGCTTGTGGCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GFLLLLLALVAGEVLQDHFFFFS*RLWRVK
Trigger: CTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAA...GTGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS TCA 90 bp TGTGCTCCTGAAGGCTCTGTTGCTCCTGGACTCCCTGCCAAGAACTaGCCTGGACATCGGAGTCATTCGCCTCTTTCTGAGACAATGCAT +
Preference number: 5 (lower is better)
Translates to: CAPEGSVAPGLPAKN*PGHRSHSPLSETMH
Trigger: ATGCATTGTCTCAGAAAGAGGCGAATGACTCCGATGTCCAGGTCAGTTCTTGGCAGGGAGTCCAGGAGCAACAGAGCCTTCAGGAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS GCA 90 bp AAGCCGAAGGACAAACAGCCTGTTGCCATGGGCAACAGATGTACTTaGACGGGTCTTACTCCTGAAGGTGAGGAGAGAGGCCAGACAATG +
Preference number: 5 (lower is better)
Translates to: KPKDKQPVAMGNRCT*TGLTPEGEERGQTM
Trigger: CATTGTCTGGCCTCTCTCCTCACCTTCAGGAGTAAGACCCGTGCAAGTACATCTGTTGCCCATGGCAACAGGCTGTTTGTCCTTCGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS-3UTR CAA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATGGCTGCGTGTCTGGCTaGAGCCCACTGCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYGCVSG*SPLHRS
Trigger: GGACCTGTGCAGTGGGCTCAAGCCAGACACGCAGCC...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TGGGCATGCTGCGGCAGGTCCCATCTCACTACGCTGGGGCAACCATGCATGGGCTTCAGGCGGTCTTCTTaGGTGATAATTTTGAAAATG +
Preference number: 5 (lower is better)
Translates to: WACCGRSHLTTLGQPCMGFRRSS*VIILKM
Trigger: CATTTTCAAAATTATCACCAAAGAAGACCGCCTGAA...GCCCATGCATGGTTGCCCCAGCGTAGTGAGATGGGACCTGCCGCAGCATGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCAGCTACAGCACCTATTaGGTTATGAACACAGCATTT +
Preference number: 5 (lower is better)
Translates to: PFARRAPGLALLIGRDLLSYSTY*VMNTAF
Trigger: AAATGCTGTGTTCATAACCAAATAGGTGCTGTAGCT...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp AGGTCCCTGATGTACTGTTTCCAGAGTTCATGGAGAGGGAGGAAAAGGCTGTATCTCCTGAAGGCTCTGTaGCTCCTGGACTCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: RSLMYCFQSSWRGRKRLYLLKAL*LLDSLP
Trigger: TGGCAGGGAGTCCAGGAGCAACAGAGCCTTCAGGAG...ATACAGCCTTTTCCTCCCTCTCCATGAACTCTGGAAACAGTACATCAGGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS-3UTR CAA 90 bp CCTTTCGCCAGGAGGGCTCCTGGCCTTGCCTTGCTGATCGGCAGAGACTTGCTCTTCAGGCGGTCTTCTTaGGTGATAATTTTGAAAATG +
Preference number: 5 (lower is better)
Translates to: PFARRAPGLALLIGRDLLFRRSS*VIILKM
Trigger: CATTTTCAAAATTATCACCAAAGAAGACCGCCTGAA...GAGCAAGTCTCTGCCGATCAGCAAGGCAAGGCCAGGAGCCCTCCTGGCGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCAACACGCAGTTTAGCTaGGGGATAACTTTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSNTQFS*GITFRR
Trigger: CCGCCTGAAAGTTATCCCCAAGCTAAACTGCGTGTT...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCTCGCAGACCGTTCACTaGACCGAAGCTGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSSQTVH*TEAGIC
Trigger: GCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGA...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCTGCGACCTTCCCATGTaGTTCAACATCCTCAACTCG +
Preference number: 5 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSCDLPM*FNILNS
Trigger: CGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCA...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCAATCTCAATCTACCCTaGAGTCAGCGAGGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSNLNLP*SQRGLR
Trigger: CCTAAGGCCTCGCTGACTCAAGGGTAGATTGAGATT...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCTTCTTCTTCTTCTCCTaGCGCTTGTGGCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSFFFFS*RLWRVK
Trigger: CTTCACCCGCCACAAGCGCAAGGAGAAGAAGAAGAA...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585603.6
CDS TCA 90 bp ATCTTTGCCATCACCTCTGTTGCTCCTGGACTCCCTGCCAAGAACTaGCCTGGACATCGGAGTCATTCGCCTCTTTCTGAGACAATGCAT +
Preference number: 5 (lower is better)
Translates to: IFAITSVAPGLPAKN*PGHRSHSPLSETMH
Trigger: ATGCATTGTCTCAGAAAGAGGCGAATGACTCCGATGTCCAGGTCAGTTCTTGGCAGGGAGTCCAGGAGCAACAGAGGTGATGGCAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586173.1
CDS-3UTR CAA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCATCGTTCCCTTCGCTTaGAACTTCTTCGCAGACCGT +
Preference number: 5 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSIVPFA*NFFADR
Trigger: ACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGAT...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACTGATCGGCAGAGACTaGCTCCTCAAAGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQLIGRD*LLKGKG
Trigger: CCCCTTCCCTTTGAGGAGCAAGTCTCTGCCGATCAG...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TCCTATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCTGCCAGTCTGTTCCAGCACATCCTGCACTTaGAACTGCATCCGTCTCATC +
Preference number: 5 (lower is better)
Translates to: SYSSQPVLTPVCFLPVCSSTSCT*NCIRLI
Trigger: GATGAGACGGATGCAGTTCAAAGTGCAGGATGTGCT...GGAACAGACTGGCAGGAAGCACACCGGGGTTAACACTGGTTGACTTGAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGACTCAAGACAGGGATTaGCTCAGCGGGAAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: NILNSERHWLEVVYKWNWTQDRD*LSGKAG
Trigger: ACCTGCTTTCCCGCTGAGCAAATCCCTGTCTTGAGT...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTATCGTTCCCTTCGCTTaGAACTTCTTCGCAGACCGT +
Preference number: 5 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAIVPFA*NFFADR
Trigger: ACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGAT...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp AACATCCTCAACTCGGAGCGTCACTGGCTGGAGGTGGTCTATAAATGGAATTGGTGCGACCTTCCCATGTaGTTCAACATCCTCAACTCG +
Preference number: 5 (lower is better)
Translates to: NILNSERHWLEVVYKWNWCDLPM*FNILNS
Trigger: CGAGTTGAGGATGTTGAACAACATGGGAAGGTCGCA...CCAATTCCATTTATAGACCACCTCCAGCCAGTGACGCTCCGAGTTGAGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS CCA 90 bp GTTTCCTCATTGGTAGGACCACACCAGCCCAGGGCGGTGTCCACCTaGACTTCTTTTCATGAGAGAGAAATAAACGTGAGTCTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: VSSLVGPHQPRAVST*TSFHEREINVSLVE
Trigger: TTCAACAAGACTCACGTTTATTTCTCTCTCATGAAAAGAAGTCCAGGTGGACACCGCCCTGGGCTGGTGTGGTCCTACCAATGAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592749.1
CDS-3UTR CAA 90 bp ATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTTCACTTTCGCAGACCGTTCACTaGACCGAAGCTGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: IHRSIVPFALNFFADRSLSQTVH*TEAGIC
Trigger: GCAAATTCCAGCTTCGGTCAAGTGAACGGTCTGCGA...AAGTGAACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR CAA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAAACTCAAGACAGGGATTaGCTCAGCGGGAAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQTQDRD*LSGKAG
Trigger: ACCTGCTTTCCCGCTGAGCAAATCCCTGTCTTGAGT...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp CAAAGAATTCACAGGTCAATCGTTCCCTTCGCTTTGAACTTCTTCGCAGACCGTATCGTTCCCTTCGCTTaGAACTTCTTCGCAGACCGT +
Preference number: 5 (lower is better)
Translates to: QRIHRSIVPFALNFFADRIVPFA*NFFADR
Trigger: ACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGAT...ACGGTCTGCGAAGAAGTTCAAAGCGAAGGGAACGATTGACCTGTGAATTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591061.5
CDS-3UTR CAA 90 bp GTGGTTTGGGTGGAAGTTACCAGAAACGCAAAGCCCTGGCACTGCTACTTCTCCAGCTACAGCACCTATTaGGTTATGAACACAGCATTT +
Preference number: 5 (lower is better)
Translates to: VVWVEVTRNAKPWHCYFSSYSTY*VMNTAF
Trigger: AAATGCTGTGTTCATAACCAAATAGGTGCTGTAGCT...GGAGAAGTAGCAGTGCCAGGGCTTTGCGTTTCTGGTAACTTCCACCCAAACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS GCA 90 bp GGTGGACATTTAGGGAGTGTCCAGTTTTCAGCTGTCATAAACAACTaGCTTAGACGGCAAAGAATTCACAGGTCAATCGTTCCCTTCGCT +
Preference number: 5 (lower is better)
Translates to: GGHLGSVQFSAVINN*LRRQRIHRSIVPFA
Trigger: AGCGAAGGGAACGATTGACCTGTGAATTCTTTGCCGTCTAAGGCAGTTGTTTATGACAGCTGAAAACTGGACACTCCCTAAATGTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221770.7
ENST00000585603.6
ENST00000587232.1
ENST00000591824.5
CDS-3UTR CAA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATAACACGCAGTTTAGCTaGGGGATAACTTTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYNTQFS*GITFRR
Trigger: CCGCCTGAAAGTTATCCCCAAGCTAAACTGCGTGTT...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp CCTTTCAACCTGGCTGGACTGCAGCAATACCTCCTTTATTTGATCCCTGTTTATAATCTCAATCTACCCTaGAGTCAGCGAGGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: PFNLAGLQQYLLYLIPVYNLNLP*SQRGLR
Trigger: CCTAAGGCCTCGCTGACTCAAGGGTAGATTGAGATT...ATAAACAGGGATCAAATAAAGGAGGTATTGCTGCAGTCCAGCCAGGTTGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS CCA 90 bp TCTGAAACGTGTGGGCAACATCTTGCTTTGGCAATGAAACCCGAGTaGGTGACTGTCTGGCTCTATCAAAAGCTACAAAGTAATACACAC +
Preference number: 5 (lower is better)
Translates to: SETCGQHLALAMKPE*VTVWLYQKLQSNTH
Trigger: GTGTGTATTACTTTGTAGCTTTTGATAGAGCCAGACAGTCACCCACTCGGGTTTCATTGCCAAAGCAAGATGTTGCCCACACGTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS-3UTR CAA 90 bp TTTCAGATGGCTGGGGGAATAGATGCCACTTCCCACTCAAGACAGGGATTTGCTCAATACCTCCTTTATTaGATCCCTGTTTATGTCCAC +
Preference number: 5 (lower is better)
Translates to: FQMAGGIDATSHSRQGFAQYLLY*IPVYVH
Trigger: GTGGACATAAACAGGGATCAAATAAAGGAGGTATTG...AGCAAATCCCTGTCTTGAGTGGGAAGTGGCATCTATTCCCCCAGCCATCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS-3UTR CAA 90 bp CTGACTTCTTCACTTAGTACGCTGCGACCTTCCCATGTTGTTCAACATCCTCAACAATACCTCCTTTATTaGATCCCTGTTTATGTCCAC +
Preference number: 5 (lower is better)
Translates to: LTSSLSTLRPSHVVQHPQQYLLY*IPVYVH
Trigger: GTGGACATAAACAGGGATCAAATAAAGGAGGTATTG...TTGAGGATGTTGAACAACATGGGAAGGTCGCAGCGTACTAAGTGAAGAAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221770.7
ENST00000585603.6
CDS GCA 72 bp GGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTGCTaGGCTTCAGGAAGGCCCTCACGAAGGCCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: GPRGPAGSCGAC*ASGRPSRRPRP
Trigger: GGGCCGAGGCCTTCGTGAGGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585603.6
ENST00000586136.5
ENST00000586420.5
ENST00000586823.5
ENST00000588551.5
ENST00000590688.1
ENST00000591824.5
ENST00000592759.5
CDS GCA 72 bp GCTGGTCCTCGCGGGCCTGCGGGCTCATGCGGGGCGTaGTGCGCTTCAGGAAGGCCCTCACGAAGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: AGPRGPAGSCGA*CASGRPSRRPR
Trigger: CCGAGGCCTTCGTGAGGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585603.6
ENST00000586136.5
ENST00000586420.5
ENST00000586823.5
ENST00000588551.5
ENST00000590688.1
ENST00000591824.5
ENST00000592759.5
CDS CCA 72 bp GGCGGACAAGGGGGTGCGGCGCTCACTGCTCCGGTCTaGGCAGCCCAGGATCCCAGGCATCCCGCCCGCCAT +
Preference number: 6 (lower is better)
Translates to: GGQGGAALTAPV*AAQDPRHPARH
Trigger: ATGGCGGGCGGGATGCCTGGGATCCTGGGCTGCCCAGACCGGAGCAGTGAGCGCCGCACCCCCTTGTCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS GCA 72 bp TGCGCTGCAGCTGGTCCTCGCGGGCCTGCGGGCTCATaGGGGGCGTGCTGCGCTTCAGGAAGGCCCTCACGA +
Preference number: 6 (lower is better)
Translates to: CAAAGPRGPAGS*GACCASGRPSR
Trigger: TCGTGAGGGCCTTCCTGAAGCGCAGCACGCCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585603.6
ENST00000586136.5
ENST00000586420.5
ENST00000586823.5
ENST00000588551.5
ENST00000590688.1
ENST00000591824.5
ENST00000592759.5
CDS TCA 72 bp GAAGGCCCTCACGAAGGCCTCGGCCCGCTGTGCTCCTaGAGGCTGCAGGCGGACAAGGGGGTGCGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: EGPHEGLGPLCS*RLQADKGVRRS
Trigger: TGAGCGCCGCACCCCCTTGTCCGCCTGCAGCCTTCAGGAGCACAGCGGGCCGAGGCCTTCGTGAGGGCCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS GCA 72 bp GAAGGCTGCAGGCGGACAAGGGGGTGCGGCGCTCACTaGTCCGGTCTGGGCAGCCCAGGATCCCAGGCATCC +
Preference number: 6 (lower is better)
Translates to: EGCRRTRGCGAH*SGLGSPGSQAS
Trigger: GGATGCCTGGGATCCTGGGCTGCCCAGACCGGAGCAGTGAGCGCCGCACCCCCTTGTCCGCCTGCAGCCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS GCA 72 bp CGCTGTGCTCCTGAAGGCTGCAGGCGGACAAGGGGGTaGGGCGCTCACTGCTCCGGTCTGGGCAGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: RCAPEGCRRTRG*GAHCSGLGSPG
Trigger: TCCTGGGCTGCCCAGACCGGAGCAGTGAGCGCCGCACCCCCTTGTCCGCCTGCAGCCTTCAGGAGCACAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS GCA 72 bp CTCACGAAGGCCTCGGCCCGCTGTGCTCCTGAAGGCTaGAGGCGGACAAGGGGGTGCGGCGCTCACTGCTCC +
Preference number: 6 (lower is better)
Translates to: LTKASARCAPEG*RRTRGCGAHCS
Trigger: GGAGCAGTGAGCGCCGCACCCCCTTGTCCGCCTGCAGCCTTCAGGAGCACAGCGGGCCGAGGCCTTCGTGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591824.5
CDS GCA 72 bp CGGCCCGCTGTGCTCCTGAAGGTGAGGCTCTCAACCTaGTCATCCGCCATGCATCTGCTACCCACAGCTGGA +
Preference number: 6 (lower is better)
Translates to: RPAVLLKVRLST*SSAMHLLPTAG
Trigger: TCCAGCTGTGGGTAGCAGATGCATGGCGGATGAGCAGGTTGAGAGCCTCACCTTCAGGAGCACAGCGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586136.5
CDS GCA 72 bp CGCGGGCAGAAAGACGTGGGGAGCTCGGGTTACCTCTaGTGCTCTGGTTTAATGTCAAAGAGCCGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RGQKDVGSSGYL*CSGLMSKSRSS
Trigger: GGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGGTAACCCGAGCTCCCCACGTCTTTCTGCCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS GCA 72 bp GGGCAGAAAGACGTGGGGAGCTCGGGTTACCTCTGCTaGTCTGGTTTAATGTCAAAGAGCCGCAGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: GQKDVGSSGYLC*SGLMSKSRSSL
Trigger: GAGGGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGGTAACCCGAGCTCCCCACGTCTTTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS TCA 72 bp GAAGGCTCTGTTGCTCCTGGACTCCCTGCCAAGAACTaGCCTGGACATCGGAGTCATTCGCCTCTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: EGSVAPGLPAKN*PGHRSHSPLSE
Trigger: CTCAGAAAGAGGCGAATGACTCCGATGTCCAGGTCAGTTCTTGGCAGGGAGTCCAGGAGCAACAGAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586823.5
CDS CCA 72 bp CTACTGAGCCATCTTTGCCATCACCTCTGTTGCTCCTaGACTCCCTGCCAAGAACTGACCTGGACATCGGAG +
Preference number: 6 (lower is better)
Translates to: LLSHLCHHLCCS*TPCQELTWTSE
Trigger: CTCCGATGTCCAGGTCAGTTCTTGGCAGGGAGTCCAGGAGCAACAGAGGTGATGGCAAAGATGGCTCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586173.1
CDS CAA 90 bp CCTCTGCTGCTCTGGTTTAATGTCAAAGAGCCGCAGCTCCCTCCTTaGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTTGCG +
Preference number: 6 (lower is better)
Translates to: PLLLWFNVKEPQLPP*PGREAFGFLLLLLA
Trigger: CGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS CAA 90 bp GCTCTGCTGCTCTGGTTTAATGTCAAAGAGCCGCAGCTCCCTCCTTaGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCTTCTCCTTGCG +
Preference number: 6 (lower is better)
Translates to: ALLLWFNVKEPQLPP*PGREAFGFLLLLLA
Trigger: CGCAAGGAGAAGAAGAAGAAAGCCAAAGGCCTCTCTGCCAGGCAAAGGAGGGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586420.5
CDS TCA 72 bp ATCACCTCTGTTGCTCCTGGACTCCCTGCCAAGAACTaGCCTGGACATCGGAGTCATTCGCCTCTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: ITSVAPGLPAKN*PGHRSHSPLSE
Trigger: CTCAGAAAGAGGCGAATGACTCCGATGTCCAGGTCAGTTCTTGGCAGGGAGTCCAGGAGCAACAGAGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586173.1
CDS GCA 72 bp CTGGACATCGGAGTCATTCGCCTCTTTCTGAGACAATaGATGGTAGATCACACCCGTGCTCCAGCCCTCAGT +
Preference number: 6 (lower is better)
Translates to: LDIGVIRLFLRQ*MVDHTRAPALS
Trigger: ACTGAGGGCTGGAGCACGGGTGTGATCTACCATGCATTGTCTCAGAAAGAGGCGAATGACTCCGATGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586136.5
ENST00000590688.1
CDS GCA 72 bp GACAAACAGCCTGTTGCCATGGGCAACAGATGTACTTaGACGGGTCTTACTCCTGAAGGTGAGGAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: DKQPVAMGNRCT*TGLTPEGEERG
Trigger: GCCTCTCTCCTCACCTTCAGGAGTAAGACCCGTGCAAGTACATCTGTTGCCCATGGCAACAGGCTGTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS CCA 72 bp TTGGTAGGACCACACCAGCCCAGGGCGGTGTCCACCTaGACTTCTTTTCATGAGAGAGAAATAAACGTGAGT +
Preference number: 6 (lower is better)
Translates to: LVGPHQPRAVST*TSFHEREINVS
Trigger: ACTCACGTTTATTTCTCTCTCATGAAAAGAAGTCCAGGTGGACACCGCCCTGGGCTGGTGTGGTCCTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592749.1
CDS GCA 72 bp CTGGACATCGGAGTCATTCGCCTCTTTCTGAGACAATaGATGGTAGATCACACTCTTCATTCTCGGACCGCT +
Preference number: 6 (lower is better)
Translates to: LDIGVIRLFLRQ*MVDHTLHSRTA
Trigger: AGCGGTCCGAGAATGAAGAGTGTGATCTACCATGCATTGTCTCAGAAAGAGGCGAATGACTCCGATGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221770.7
ENST00000585603.6
ENST00000586173.1
ENST00000586420.5
ENST00000586823.5
ENST00000588551.5
ENST00000591061.5
ENST00000591824.5
CDS CAA 72 bp TTGGAAACTTCTGAAACGTGTGGGCAACATCTTGCTTaGGCAATGAAACCCGAGTGGGTGACTGTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LETSETCGQHLA*AMKPEWVTVWL
Trigger: GAGCCAGACAGTCACCCACTCGGGTTTCATTGCCAAAGCAAGATGTTGCCCACACGTTTCAGAAGTTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS CAA 90 bp GGAGGAAGACATCCTCCCACAGGACAGGACAGTGATGCATTCCTTTaGGAAACTTCTGAAACGTGTGGGCAACATCTTGCTTTGGCAATG +
Preference number: 6 (lower is better)
Translates to: GGRHPPTGQDSDAFL*ETSETCGQHLALAM
Trigger: CATTGCCAAAGCAAGATGTTGCCCACACGTTTCAGAAGTTTCCAAAAGGAATGCATCACTGTCCTGTCCTGTGGGAGGATGTCTTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS GCA 72 bp TTTCTGTCTAACAAAGCCGAAGGACAAACAGCCTGTTaGCATGGGCAACAGATGTACTTGCACGGGTCTTAC +
Preference number: 6 (lower is better)
Translates to: FLSNKAEGQTAC*HGQQMYLHGSY
Trigger: GTAAGACCCGTGCAAGTACATCTGTTGCCCATGGCAACAGGCTGTTTGTCCTTCGGCTTTGTTAGACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS CAA 72 bp CATCCTCCCACAGGACAGGACAGTGATGCATTCCTTTaGGAAACTTCTGAAACGTGTGGGCAACATCTTGCT +
Preference number: 6 (lower is better)
Translates to: HPPTGQDSDAFL*ETSETCGQHLA
Trigger: AGCAAGATGTTGCCCACACGTTTCAGAAGTTTCCAAAAGGAATGCATCACTGTCCTGTCCTGTGGGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS CAA 90 bp GCATTCCTTTTGGAAACTTCTGAAACGTGTGGGCAACATCTTGCTTaGGCAATGAAACCCGAGTGGGTGACTGTCTGGCTCTATCAAAAG +
Preference number: 6 (lower is better)
Translates to: AFLLETSETCGQHLA*AMKPEWVTVWLYQK
Trigger: CTTTTGATAGAGCCAGACAGTCACCCACTCGGGTTTCATTGCCAAAGCAAGATGTTGCCCACACGTTTCAGAAGTTTCCAAAAGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS CCA 72 bp TGTGGGCAACATCTTGCTTTGGCAATGAAACCCGAGTaGGTGACTGTCTGGCTCTATCAAAAGCTACAAAGT +
Preference number: 6 (lower is better)
Translates to: CGQHLALAMKPE*VTVWLYQKLQS
Trigger: ACTTTGTAGCTTTTGATAGAGCCAGACAGTCACCCACTCGGGTTTCATTGCCAAAGCAAGATGTTGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS CCA 72 bp ATCCTCCCACAGGACAGGACAGTGATGCATTCCTTTTaGAAACTTCTGAAACGTGTGGGCAACATCTTGCTT +
Preference number: 6 (lower is better)
Translates to: ILPQDRTVMHSF*KLLKRVGNILL
Trigger: AAGCAAGATGTTGCCCACACGTTTCAGAAGTTTCCAAAAGGAATGCATCACTGTCCTGTCCTGTGGGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588551.5
CDS TCA 72 bp TCTCATTATGAGCCACAAGAGGAACTTTTGCAAAACTaGCAAAGCAGGCCGAGGCATTCAGATATAATCTGT +
Preference number: 6 (lower is better)
Translates to: SHYEPQEELLQN*QSRPRHSDIIC
Trigger: ACAGATTATATCTGAATGCCTCGGCCTGCTTTGTCAGTTTTGCAAAAGTTCCTCTTGTGGCTCATAATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586173.1