RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104356

Ensembl transcript IDs: ENST00000349693.3, ENST00000401707.7, ENST00000517435.1, ENST00000522319.5

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTCCTTTTATACCCTGTTGAGAATCTCAGGTGGACAACGTGACTaGATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTTATCACCTTG +
Preference number: 1 (lower is better)
Translates to: PSFYTLLRISGGQRD*MSVERQLAGLVITL
Trigger: CAAGGTGATAACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTCACGTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR TCA 90 bp AAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCTTTAAGGCTTaGGTTGTTCGGCATGGAAATCACAGTACAGAATTGAATGAGGTC +
Preference number: 1 (lower is better)
Translates to: KTGRNQLSMISLFKA*VVRHGNHSTELNEV
Trigger: GACCTCATTCAATTCTGTACTGTGATTTCCATGCCGAACAACTCAAGCCTTAAAGAGAGAAATCATGGACAACTGATTTCTGCCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR TCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCCAGTACAGAATTGAATaGGGTCCATCAGGAGCCCAT +
Preference number: 2 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCQYRIE*GPSGAH
Trigger: ATGGGCTCCTGATGGACCTCATTCAATTCTGTACTG...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR GCA 90 bp AGGCATGGTAAGAGGCAAAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGGTATTATCTATGCCCTaGTGGGATACAAGCACGCAT +
Preference number: 2 (lower is better)
Translates to: RHGKRQSIRHLIGGRYFLVLSMP*WDTSTH
Trigger: ATGCGTGCTTGTATCCCAGCAGGGCATAGATAATAC...CAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTTTGCCTCTTACCATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR TCA 90 bp GACTGCATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTTATCACCTTGCAGAGGGAAATCAGTTGTCCATaGTTTCTCTCTTTAAGGCTT +
Preference number: 2 (lower is better)
Translates to: DCMSVERQLAGLVITLQREISCP*FLSLRL
Trigger: AAGCCTTAAAGAGAGAAATCATGGACAACTGATTTC...CCTCTGCAAGGTGATAACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR TCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCGTTTCCATATCAACCTaGCCTTGGAATCTCTTACTT +
Preference number: 2 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCVSIST*PWNLLL
Trigger: AAGTAAGAGATTCCAAGGTCAGGTTGATATGGAAAC...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR CCA 90 bp AGGCATGGTAAGAGGCAAAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGTTGAGTTGTTCGGCATaGAAATCACAGTACAGAATT +
Preference number: 2 (lower is better)
Translates to: RHGKRQSIRHLIGGRYFLLSCSA*KSQYRI
Trigger: AATTCTGTACTGTGATTTCCATGCCGAACAACTCAA...CAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTTTGCCTCTTACCATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR CCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCTCCACATGTAGAACTTaGCAGACAATAATAACGTAT +
Preference number: 2 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCSTCRT*QTIITY
Trigger: ATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR CCA 90 bp TTTTCAGTCTCATCTGGGTTGGATCCAAAGACATTCAGAGGCATGGTAAGAGGCAGTAGGATCAAGTGTTaGTCAACAACAAAGAGATCA +
Preference number: 2 (lower is better)
Translates to: FSVSSGLDPKTFRGMVRGSRIKC*STTKRS
Trigger: TGATCTCTTTGTTGTTGACCAACACTTGATCCTACT...GCCTCTTACCATGCCTCTGAATGTCTTTGGATCCAACCCAGATGAGACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR GCA 72 bp CATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTaGTGTATCCTTCCCCACCTCATCACCCCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: HWWQVLPDYCTT*CILPHLITPKA
Trigger: GGCTTTGGGGGTGATGAGGTGGGGAAGGATACAGCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR GCA 72 bp TATACCCTGTTGAGAATCTCAGGTGGACAACGTGACTaGATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTT +
Preference number: 3 (lower is better)
Translates to: YTLLRISGGQRD*MSVERQLAGLV
Trigger: AACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTCACGTTGTCCACCTGAGATTCTCAACAGGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR CAA 90 bp AAGATGAGACCTTCCTTTTATACCCTGTTGAGAATCTCAGGTGGACAACGTGACTCTTTAAGGCTTGAGTaGTTCGGCATGGAAATCACA +
Preference number: 3 (lower is better)
Translates to: KMRPSFYTLLRISGGQRDSLRLE*FGMEIT
Trigger: TGTGATTTCCATGCCGAACAACTCAAGCCTTAAAGA...GTCACGTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR TCA 72 bp AGTTGTTCGGCATGGAAATCACAGTACAGAATTGAATaGGGTCCATCAGGAGCCCATATTTCATGTACAGAG +
Preference number: 3 (lower is better)
Translates to: SCSAWKSQYRIE*GPSGAHISCTE
Trigger: CTCTGTACATGAAATATGGGCTCCTGATGGACCTCATTCAATTCTGTACTGTGATTTCCATGCCGAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR-3UTR CAA 90 bp ACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTTCCTGCTCCTCTATGGCTTaGAGAAAATCTTTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: TIISFLEIRNAHYHMEVSCSSMA*RKSLQK
Trigger: TTTCTGCAAAGATTTTCTCAAAGCCATAGAGGAGCA...GGAAACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR GCA 72 bp ACTATACACTATCATTTCCTTCCTAGAGATCCGCAATaGACATTATCACATGGAAGTTTCCAGAAGTTCTTT +
Preference number: 3 (lower is better)
Translates to: TIHYHFLPRDPQ*TLSHGSFQKFF
Trigger: AAAGAACTTCTGGAAACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp AGGCATGGTAAGAGGCAAAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGATCCTTGCTGGCCTCTaGCGGGAGCTCGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RHGKRQSIRHLIGGRYFLILAGL*RELAGL
Trigger: GAGGCCGGCGAGCTCCCGGCAGAGGCCAGCAAGGAT...CAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTTTGCCTCTTACCATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp AGCCACACTGCCCAAAGCGCGCTACTAAGAACACTGGTCCTACAAAGGGCTCCTAGAGTCAGAGCTTCCTaGCCAGCCACGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SHTAQSALLRTLVLQRAPRVRAS*PATGSS
Trigger: GGAAGAGCCCGTGGCTGGGCAGGAAGCTCTGACTCT...AGGAGCCCTTTGTAGGACCAGTGTTCTTAGTAGCGCGCTTTGGGCAGTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AGGCATGGTAAGAGGCAAAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGTGGCCTCCTGGTCTGTaGTCCTCTCAGGCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: RHGKRQSIRHLIGGRYFLWPPGL*SSQALP
Trigger: CGGCAGGGCCTGAGAGGATCACAGACCAGGAGGCCA...CAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTTTGCCTCTTACCATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp GACTGCATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTTATCACCTTGCAGAGGCCCAAACCAGGGCCCTaGGGAAGTGGCCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: DCMSVERQLAGLVITLQRPKPGP*GSGPRW
Trigger: CCATCTTGGGCCACTTCCCCAGGGCCCTGGTTTGGG...CCTCTGCAAGGTGATAACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp GACTGCATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTTATCACCTTGCAGAGGACACAGATCATGGTGTaGGGCTCGGGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: DCMSVERQLAGLVITLQRTQIMV*GSGLPL
Trigger: CAAGGGCAGCCCCGAGCCTCACACCATGATCTGTGT...CCTCTGCAAGGTGATAACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCCACACTGCCCAAAGCGCGCTACTAAGAACACTGGTCCTACAAAGGGCTCCTAGGCGTTTGACGTTGTaGCTCATGGCTCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: SHTAQSALLRTLVLQRAPRRLTL*LMALRR
Trigger: GCGACGAAGAGCCATGAGCCACAACGTCAAACGCCT...AGGAGCCCTTTGTAGGACCAGTGTTCTTAGTAGCGCGCTTTGGGCAGTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp CACACTGAGCCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTCCTCCTCTGCCTCCCTaGGGTGCTCTATGGATGTGC +
Preference number: 4 (lower is better)
Translates to: HTEPTLPVRQDETFLLYPPPLPP*GALWMC
Trigger: GCACATCCATAGAGCACCCCAGGGAGGCAGAGGAGG...AGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGGCTCAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCGCAGAGAATGGGGGTTaGCTCTGGTTTGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCAENGG*LWFAAV
Trigger: GACAGCGGCAAACCAGAGTCAACCCCCATTCTCTGC...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCGGCCCTGCCGATTCTTaGCACCCTGCATCCATTACC +
Preference number: 4 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCGPADS*HPASIT
Trigger: GGTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCC...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCCTGAGAACGCAGAGGTaGCTCCCTGTGGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCLRTQR*LPVAAT
Trigger: TGTTGCTGCCACAGGGAGTCACCTCTGCGTTCTCAG...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGATCCTTGCTGGCCTCTaGCGGGAGCTCGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTILAGL*RELAGL
Trigger: GAGGCCGGCGAGCTCCCGGCAGAGGCCAGCAAGGAT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCTCTCTGGTCAATCCTTaGTGGCCTCTGCCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCSLVNP*WPLPGA
Trigger: AGCTCCCGGCAGAGGCCAGCAAGGATTGACCAGAGA...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCCACACTGCCCAAAGCGCGCTACTAAGAACACTGGTCCTACAAAGGGCTCCTTTCTCCGCCTCTTTCTaGGCAATCTCCTGTAACCGT +
Preference number: 4 (lower is better)
Translates to: SHTAQSALLRTLVLQRAPFSASF*AISCNR
Trigger: ACGGTTACAGGAGATTGCCCAGAAAGAGGCGGAGAA...AGGAGCCCTTTGTAGGACCAGTGTTCTTAGTAGCGCGCTTTGGGCAGTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCCTCTGCGCTGCAGGCTaGCTGGACAGCATATCCAGC +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCLCAAG*LDSISS
Trigger: GCTGGATATGCTGTCCAGCCAGCCTGCAGCGCAGAG...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATTACTTGGGGATCTCCTaGGACGTGCCCTCGGGACCT +
Preference number: 4 (lower is better)
Translates to: PTLPVRQDETFLLYPVENYLGIS*DVPSGP
Trigger: AGGTCCCGAGGGCACGTCTCAGGAGATCCCCAAGTA...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp GACTGCATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTTATCACCTTGCAGAGGTGCAGACAGCTGATTTaGTGGGTTCCACACACTGGC +
Preference number: 4 (lower is better)
Translates to: DCMSVERQLAGLVITLQRCRQLI*WVPHTG
Trigger: GCCAGTGTGTGGAACCCATCAAATCAGCTGTCTGCA...CCTCTGCAAGGTGATAACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCAGCCCACTCTTCCTGTaGGGCAAGATGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCSPLFL*GKMRPS
Trigger: GGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGGCT...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCGGGTCAGGCAGAGAATaGGGGTTGACTCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCGSGRE*GLTLVC
Trigger: GCAAACCAGAGTCAACCCCCATTCTCTGCCTGACCC...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TGGGTTGGATCCAAAGACATTCAGAGGCATGGTAAGAGGCAAAGCATCAGACATCTGGGACACAGATCATaGTGTGAGGCTCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WVGSKDIQRHGKRQSIRHLGHRS*CEARGC
Trigger: GCAGCCCCGAGCCTCACACCATGATCTGTGTCCCAG...ATGTCTGATGCTTTGCCTCTTACCATGCCTCTGAATGTCTTTGGATCCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp CCTTCCCCACCTCATCACCCCCAAAGCCATTTAGTGCCAAATGCTACAGTAAAACGTGCCCTCGGGACCTaGTTTCCATCCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PSPPHHPQSHLVPNATVKRALGT*FPSSLF
Trigger: AAAAAGGGAGGATGGAAAGCAGGTCCCGAGGGCACG...TTTTACTGTAGCATTTGGCACTAAATGGCTTTGGGGGTGATGAGGTGGGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp AAGATGAGACCTTCCTTTTATACCCTGTTGAGAATCTCAGGTGGACAACGTGACGGATCTCCTGAGACGTaGCCTCGGGACCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KMRPSFYTLLRISGGQRDGSPET*PRDLLS
Trigger: GGAAAGCAGGTCCCGAGGGCACGTCTCAGGAGATCC...GTCACGTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp GACTGCATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTTATCACCTTGCAGAGGGTAGTTGGGCCGTTTTaGAGGAGGGCGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: DCMSVERQLAGLVITLQRVVGPF*RRASFV
Trigger: TACAAAAGACGCCCTCCTGCAAAACGGCCCAACTAC...CCTCTGCAAGGTGATAACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATGGCACCGGTTCGTCATaGCTCGATAGCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PTLPVRQDETFLLYPVENGTGSS*LDSRLC
Trigger: ACAGAGCCTGCTATCGAGCCATGACGAACCGGTGCC...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp CCTTCCCCACCTCATCACCCCCAAAGCCATTTAGTGCCAAATGCTACAGTAAAAGGATGGTGTTGGAAGTaGGTCAGCGATGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PSPPHHPQSHLVPNATVKGWCWK*VSDADS
Trigger: GCTGTCTGCATCGCTGACCCACTTCCAACACCATCC...TTTTACTGTAGCATTTGGCACTAAATGGCTTTGGGGGTGATGAGGTGGGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp CACACTGAGCCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGAAGTCCTCCTTGGCTaGGACACAGATCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: HTEPTLPVRQDETFLLYPEVLLG*DTDHGV
Trigger: CACACCATGATCTGTGTCCCAGCCAAGGAGGACTTC...AGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGGCTCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AGGCATGGTAAGAGGCAAAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGAGCGTCCGGTTCATGTaGCATCTTCGAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: RHGKRQSIRHLIGGRYFLSVRFM*HLRALW
Trigger: CCATAAAGCTCGAAGATGTCACATGAACCGGACGCT...CAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTTTGCCTCTTACCATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCCTTGACTCCCAGTCTTaGGTTAACTGCTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCLDSQS*VNCSQG
Trigger: TCCCTGGGAGCAGTTAACTCAAGACTGGGAGTCAAG...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTTGGCCTCCTGGTCTGTaGTCCTCTCAGGCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAWPPGL*SSQALP
Trigger: CGGCAGGGCCTGAGAGGATCACAGACCAGGAGGCCA...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp CACACTGAGCCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGGTGCTCTATGGATGTaGCCACTTCATCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: HTEPTLPVRQDETFLLYPGALWM*PLHQMA
Trigger: AGCCATCTGATGAAGTGGGCACATCCATAGAGCACC...AGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGGCTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp CCTTCCCCACCTCATCACCCCCAAAGCCATTTAGTGCCAAATGCTACAGTAAAAATCCATTACCTCCTCTaGCTCCCTGGGGTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: PSPPHHPQSHLVPNATVKIHYLL*LPGVLY
Trigger: ATAGAGCACCCCAGGGAGGCAGAGGAGGTAATGGAT...TTTTACTGTAGCATTTGGCACTAAATGGCTTTGGGGGTGATGAGGTGGGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCGCACGTCCTGGCTTCTaGCTCTTCTCCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCARPGF*LFSLFF
Trigger: GAAGAAAAGGGAGAAGAGGCAGAAGCCAGGACGTGC...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCACTACACAGCCACACTaGCCAAAGCGCGCTACTAAG +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCTTQPH*PKRATK
Trigger: CTTAGTAGCGCGCTTTGGGCAGTGTGGCTGTGTAGT...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp CCTTCCCCACCTCATCACCCCCAAAGCCATTTAGTGCCAAATGCTACAGTAAAAGATGGAGTGGGAAAGTaGCCCAATCAGCCGGAATCT +
Preference number: 4 (lower is better)
Translates to: PSPPHHPQSHLVPNATVKDGVGK*PNQPES
Trigger: AGATTCCGGCTGATTGGGCCACTTTCCCACTCCATC...TTTTACTGTAGCATTTGGCACTAAATGGCTTTGGGGGTGATGAGGTGGGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp CACACTGAGCCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTCTGGAAAATCGCCTaGGACATTAGGCGACCTCTT +
Preference number: 4 (lower is better)
Translates to: HTEPTLPVRQDETFLLYPVWKIA*DIRRPL
Trigger: AAGAGGTCGCCTAATGTCCCAGGCGATTTTCCAGAC...AGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGGCTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGCCTCCTCTGCCTCCCTaGGGTGCTCTATGGATGTGC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTPPLPP*GALWMC
Trigger: GCACATCCATAGAGCACCCCAGGGAGGCAGAGGAGG...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TGGGTTGGATCCAAAGACATTCAGAGGCATGGTAAGAGGCAAAGCATCAGACATCAGTCCTCATGGAGCTaGAGGAAGTCCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WVGSKDIQRHGKRQSIRHQSSWS*RKSSLA
Trigger: AGCCAAGGAGGACTTCCTCCAGCTCCATGAGGACTG...ATGTCTGATGCTTTGCCTCTTACCATGCCTCTGAATGTCTTTGGATCCAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TGGGTTGGATCCAAAGACATTCAGAGGCATGGTAAGAGGCAAAGCATCAGACATAGAAGAGGCACGTCCTaGCTTCTGCCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: WVGSKDIQRHGKRQSIRHRRGTS*LLPLLP
Trigger: AGGGAGAAGAGGCAGAAGCCAGGACGTGCCTCTTCT...ATGTCTGATGCTTTGCCTCTTACCATGCCTCTGAATGTCTTTGGATCCAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp ATAAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCGCGCTGCAGGCTGGCTaGACAGCATATCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: INCACLKTGRNQLSMISLALQAG*TAYPAS
Trigger: GCTTGCTGGATATGCTGTCCAGCCAGCCTGCAGCGC...GAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAACCGAGCCAAAGCTCCTaGAGAGCGCGCTGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQPSQSS*RARWRA
Trigger: CGCTCTCCAGCGCGCTCTCCAGGAGCTTTGGCTCGG...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp GACTGCATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTTATCACCTTGCAGAGGTTGGCGTGCCAGATGTaGGTTTCTAACCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: DCMSVERQLAGLVITLQRLACQM*VSNQMF
Trigger: GAACATTTGGTTAGAAACTCACATCTGGCACGCCAA...CCTCTGCAAGGTGATAACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp CCTTCCCCACCTCATCACCCCCAAAGCCATTTAGTGCCAAATGCTACAGTAAAAAGTAGCCCCACTTCTTaGCCATATGAAACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSPPHHPQSHLVPNATVKSSPTS*PYETAW
Trigger: CCAAGCGGTTTCATATGGTCAAGAAGTGGGGCTACT...TTTTACTGTAGCATTTGGCACTAAATGGCTTTGGGGGTGATGAGGTGGGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCTTAGGCTCTGTGGCTCTTaGCTGTTGGCCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KLCLPENRQKSVVHDFSLRLCGS*LLASPQ
Trigger: TTGGGGAGAGGCCAACAGTCAAGAGCCACAGAGCCT...AAGAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGCTGAGAACGCAGAGGTaGCTCCCTGTGGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGLRTQR*LPVAAT
Trigger: TGTTGCTGCCACAGGGAGTCACCTCTGCGTTCTCAG...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATCCCCGGGTCAGAATaGCAAGCCTCCGCGACAGTA +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGIPGSE*QASATV
Trigger: TACTGTCGCGGAGGCTTGTCATTCTGACCCGGGGAT...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCTTTTCTGCCAGACGCTGTaGGGAATCCCCGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: KLCLPENRQKSVVHDFSLFCQTL*GIPGSE
Trigger: TTCTGACCCGGGGATTCCTCACAGCGTCTGGCAGAA...AAGAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp CCTTCCCCACCTCATCACCCCCAAAGCCATTTAGTGCCAAATGCTACAGTAAAAGACAACGTGACTGCATaGGTGTTGAAAGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PSPPHHPQSHLVPNATVKDNVTA*VLKGSL
Trigger: CAAGCTGCCTTTCAACACTCATGCAGTCACGTTGTC...TTTTACTGTAGCATTTGGCACTAAATGGCTTTGGGGGTGATGAGGTGGGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGAGATCCACAGCTGCCTaGTCTCAGAAGGGTCACCCG +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGRSTAA*SQKGHP
Trigger: CGGGTGACCCTTCTGAGAGCAGGCAGCTGTGGATCT...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAGCACTAAGCCCCTCTaGGCTGCAGGCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPASTKPL*AAGWLD
Trigger: GTCCAGCCAGCCTGCAGCGCAGAGGGGCTTAGTGCT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAAGCACTAAGCCCCTCTaGGCTGCAGGCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGISTKPL*AAGWLD
Trigger: GTCCAGCCAGCCTGCAGCGCAGAGGGGCTTAGTGCT...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGCTCGCAAATCGATACTaGAGAGAGGCGGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTLANRY*REAGGL
Trigger: GAGGCCTCCCGCCTCTCTGCAGTATCGATTTGCGAG...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGGGCACCGGTTCGTCATaGCTCGATAGCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTGTGSS*LDSRLC
Trigger: ACAGAGCCTGCTATCGAGCCATGACGAACCGGTGCC...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGGCATGGTAAGAGGCAAAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGCATCAGACATCTCATTaGTGGCAGGTACTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RHGKRQSIRHLIGGRYFLHQTSH*WQVLPD
Trigger: GTCAGGAAGTACCTGCCACCAATGAGATGTCTGATG...CAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTTTGCCTCTTACCATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCTGCCGTGGCAGAGTCTaGAAAACCAGTGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCCRGRV*KTSEFE
Trigger: TTCGAATTCACTGGTTTTTCAGACTCTGCCACGGCA...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCATGGAAAAATCTCCCTaGGTCACAAAGCCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCMEKSP*VTKPRR
Trigger: TCTCCTAGGCTTTGTGACTCAGGGAGATTTTTCCAT...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCCAGTACAGAATTGAATaGGGTCCATCAGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCQYRIE*GPSGAH
Trigger: ATGGGCTCCTGATGGACCTCATTCAATTCTGTACTG...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGCGTGCCCTCGGGACCTaGTTTCCATCCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTRALGT*FPSSLF
Trigger: AAAAAGGGAGGATGGAAAGCAGGTCCCGAGGGCACG...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp CACACTGAGCCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTATTATCTATGCCCTaGTGGGATACAAGCACGCAT +
Preference number: 4 (lower is better)
Translates to: HTEPTLPVRQDETFLLYPVLSMP*WDTSTH
Trigger: ATGCGTGCTTGTATCCCAGCAGGGCATAGATAATAC...AGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGGCTCAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGGGGTCAGGCAGAGAATaGGGGTTGACTCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTGSGRE*GLTLVC
Trigger: GCAAACCAGAGTCAACCCCCATTCTCTGCCTGACCC...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGAGGCGTTTGACGTTGTaGCTCATGGCTCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGRRLTL*LMALRR
Trigger: GCGACGAAGAGCCATGAGCCACAACGTCAAACGCCT...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCCCATATGAAACCGCTTaGCGTGCCAGATGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCPYETA*RARCEF
Trigger: AAACTCACATCTGGCACGCCAAGCGGTTTCATATGG...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGCCCTGGGGTGCTCTATaGATGTGCCCACTTCATCAG +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTPWGAL*MCPLHQ
Trigger: CTGATGAAGTGGGCACATCCATAGAGCACCCCAGGG...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGCCTGTGGCAGCAACATaGTTTTCACTGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTPVAAT*FSLASW
Trigger: CCAGGAGGCCAGTGAAAACCATGTTGCTGCCACAGG...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGACAGGCAAGCCTCTCTaGTCAATCCTTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTTGKPL*SILAGL
Trigger: GAGGCCAGCAAGGATTGACCAGAGAGGCTTGCCTGT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCCAAACCAGGGCCCTaGGGAAGTGGCCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCPKPGP*GSGPRW
Trigger: CCATCTTGGGCCACTTCCCCAGGGCCCTGGTTTGGG...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGGGAGGAAGTCCTCCTTaGCTGGGACACAGATCATGG +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTGGSPP*LGHRSW
Trigger: CCATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCC...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGCGCTGCAGGCTGGCTaGACAGCATATCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAALQAG*TAYPAS
Trigger: GCTTGCTGGATATGCTGTCCAGCCAGCCTGCAGCGC...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGGCATGGTAAGAGGCAAAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGCAGTCTCATCTGGGTTaGATCCAAAGACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: RHGKRQSIRHLIGGRYFLQSHLG*IQRHSE
Trigger: CTCTGAATGTCTTTGGATCCAACCCAGATGAGACTG...CAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTTTGCCTCTTACCATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGGTTTGCCGCTGTCGTaGAGTTCCAGGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQGLPLS*SSRMRL
Trigger: GAGCCTCATCCTGGAACTTCACGACAGCGGCAAACC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTTACTTGGGGATCTCCTaGGACGTGCCCTCGGGACCT +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPYLGIS*DVPSGP
Trigger: AGGTCCCGAGGGCACGTCTCAGGAGATCCCCAAGTA...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGTCTGGGAAGGCGTTTaGCGTTGTGGCTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAVWEGV*RCGSWL
Trigger: GAGCCATGAGCCACAACGTCAAACGCCTTCCCAGAC...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AAGATGAGACCTTCCTTTTATACCCTGTTGAGAATCTCAGGTGGACAACGTGACAGCGATGCAGACAGCTaGTTTGATGGGTTCCACACA +
Preference number: 4 (lower is better)
Translates to: KMRPSFYTLLRISGGQRDSDADS*FDGFHT
Trigger: TGTGTGGAACCCATCAAATCAGCTGTCTGCATCGCT...GTCACGTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTACACAGATCATGGTGTaGGGCTCGGGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPTQIMV*GSGLPL
Trigger: CAAGGGCAGCCCCGAGCCTCACACCATGATCTGTGT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTCACCTCCACTGTGGTaGTTTACACCTCTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTSPPLW*FTPLSA
Trigger: GGCTGACAGAGGTGTAAAGCACCACAGTGGAGGTGA...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGGGGTTGACTCTGGTTTaGCGCTGTCGTGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGGLTLV*RCREVP
Trigger: TGGAACTTCACGACAGCGGCAAACCAGAGTCAACCC...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGGATCTCCTGAGACGTaGCCTCGGGACCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCGSPET*PRDLLS
Trigger: GGAAAGCAGGTCCCGAGGGCACGTCTCAGGAGATCC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGCAAGCAGTGAACTGCTaGAAACGTCAGCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGQAVNC*KRQPCV
Trigger: GACACAGGGCTGACGTTTGCAGCAGTTCACTGCTTG...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ATAAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCCAAGCAGTGAACTGCTaGAAACGTCAGCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: INCACLKTGRNQLSMISLQAVNC*KRQPCV
Trigger: GACACAGGGCTGACGTTTGCAGCAGTTCACTGCTTG...GAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAGATCCACAGCTGCCTaGTCTCAGAAGGGTCACCCG +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPARSTAA*SQKGHP
Trigger: CGGGTGACCCTTCTGAGAGCAGGCAGCTGTGGATCT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATCCATTACCTCCTCTaGCTCCCTGGGGTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGIHYLL*LPGVLY
Trigger: ATAGAGCACCCCAGGGAGGCAGAGGAGGTAATGGAT...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAGATCCTCTCAGGCCCTaGCGATTCTTGACACCCTGC +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIDPLRP*RFLTPC
Trigger: GCAGGGTGTCAAGAATCGGCAGGGCCTGAGAGGATC...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGATCCTCTCAGGCCCTaGCGATTCTTGACACCCTGC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQDPLRP*RFLTPC
Trigger: GCAGGGTGTCAAGAATCGGCAGGGCCTGAGAGGATC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATATCTCTGGTCAATCCTTaGTGGCCTCTGCCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGISLVNP*WPLPGA
Trigger: AGCTCCCGGCAGAGGCCAGCAAGGATTGACCAGAGA...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTAGAGTCAGAGCTTCCTaGCCAGCCACGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPRVRAS*PATGSS
Trigger: GGAAGAGCCCGTGGCTGGGCAGGAAGCTCTGACTCT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTTCCAGAGTTCTGGAGCAGTaGAACGTCACACGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: TIISFLEIRNAHYHMEVSRVLEQ*NVTRGR
Trigger: TCTGCCGCGTGTGACGTTGCACTGCTCCAGAACTCT...GGAAACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACTCGCAAATCGATACTaGAGAGAGGCGGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGILANRY*REAGGL
Trigger: GAGGCCTCCCGCCTCTCTGCAGTATCGATTTGCGAG...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGTCACCCGGGGTCCTCTaGGACTTCCAGATAAACGTA +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGSPGVL*DFQINV
Trigger: TACGTTTATCTGGAAGTCCCAGAGGACCCCGGGTGA...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATATCCTGTTTAAGGGTTaGATGCAGCCAGATCCACAG +
Preference number: 4 (lower is better)
Translates to: PTLPVRQDETFLLYPVENILFKG*MQPDPQ
Trigger: CTGTGGATCTGGCTGCATCCAACCCTTAAACAGGAT...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGGATGGAGTGGGAAAGTaGCCCAATCAGCCGGAATCT +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGDGVGK*PNQPES
Trigger: AGATTCCGGCTGATTGGGCCACTTTCCCACTCCATC...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACCCGGCAGGGCAGTCTaGAAAATCGCCTGGGACATT +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIPGRAV*KIAWDI
Trigger: AATGTCCCAGGCGATTTTCCAGACTGCCCTGCCGGG...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTTCCGACTATCCTCAGAACTaGGCCCACACCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TIISFLEIRNAHYHMEVSDYPQN*AHTRLT
Trigger: TGTCAGCCTGGTGTGGGCCCAGTTCTGAGGATAGTC...GGAAACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCTGGGACACAGATCATaGTGTGAGGCTCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPLGHRS*CEARGC
Trigger: GCAGCCCCGAGCCTCACACCATGATCTGTGTCCCAG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGGAAGTCCTCCTTGGCTaGGACACAGATCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGEVLLG*DTDHGV
Trigger: CACACCATGATCTGTGTCCCAGCCAAGGAGGACTTC...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGATGGGTCACTGTGTTTaGATTCCTGGGGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTMGHCV*IPGAHS
Trigger: ACTGTGGGCCCCAGGAATCCAAACACAGTGACCCAT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCTCTGCGCTGCAGGCTaGCTGGACAGCATATCCAGC +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCLCAAG*LDSISS
Trigger: GCTGGATATGCTGTCCAGCCAGCCTGCAGCGCAGAG...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGGTTTGCCGCTGTCGTaGAGTTCCAGGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPGLPLS*SSRMRL
Trigger: GAGCCTCATCCTGGAACTTCACGACAGCGGCAAACC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCAGAGAATGGGGGTTaGCTCTGGTTTGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPAENGG*LWFAAV
Trigger: GACAGCGGCAAACCAGAGTCAACCCCCATTCTCTGC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGTCTGGGAAGGCGTTTaGCGTTGTGGCTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPVWEGV*RCGSWL
Trigger: GAGCCATGAGCCACAACGTCAAACGCCTTCCCAGAC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTAGGCTCTGTGGCTCTTaGCTGTTGGCCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPRLCGS*LLASPQ
Trigger: TTGGGGAGAGGCCAACAGTCAAGAGCCACAGAGCCT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp ATAAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCTTTCCAGACAAGCAGTaGACTGCTGCAAACGTCAGC +
Preference number: 4 (lower is better)
Translates to: INCACLKTGRNQLSMISLFPDKQ*TAANVS
Trigger: GCTGACGTTTGCAGCAGTTCACTGCTTGTCTGGAAA...GAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCTCTATCCACCAGCGGTaGGGTGTCTCCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCSIHQR*GVSSVS
Trigger: GGACACAGAGGAGACACCTCACCGCTGGTGGATAGA...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGGCCCTGCCGATTCTTaGCACCCTGCATCCATTACC +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPGPADS*HPASIT
Trigger: GGTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGTGTTTAAGGGTTGGATaGAGCCAGATCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGCLRVG*SQIHSC
Trigger: GCAGCTGTGGATCTGGCTGCATCCAACCCTTAAACA...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGCGATTCTTGACACCCTaGATCCATTACCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGRFLTP*IHYLLC
Trigger: GCAGAGGAGGTAATGGATGCAGGGTGTCAAGAATCG...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ATAAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCCGATTCTTGACACCCTaGATCCATTACCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: INCACLKTGRNQLSMISLRFLTP*IHYLLC
Trigger: GCAGAGGAGGTAATGGATGCAGGGTGTCAAGAATCG...GAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCCACCAGGCTGACAGTTaGTTCAGTAATTTTCTACTC +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCHQADS*FSNFLL
Trigger: GAGTAGAAAATTACTGAAGCAACTGTCAGCCTGGTG...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGGGTGGACAACGTGACTaGATGAGTGTTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTGGQRD*MSVERQ
Trigger: CTGCCTTTCAACACTCATGCAGTCACGTTGTCCACC...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp GACTGCATGAGTGTTGAAAGGCAGCTTGCCGGCTTAGTTATCACCTTGCAGAGGCCATTTAGTGCCAAATaGTACAGTAAAAACCCAATG +
Preference number: 4 (lower is better)
Translates to: DCMSVERQLAGLVITLQRPFSAK*YSKNPM
Trigger: CATTGGGTTTTTACTGTAGCATTTGGCACTAAATGG...CCTCTGCAAGGTGATAACTAAGCCGGCAAGCTGCCTTTCAACACTCATGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGTGGCTCTTGACTGTTaGCCTCTCCCCAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAVALDC*PLPKAV
Trigger: TACTGCCTTGGGGAGAGGCCAACAGTCAAGAGCCAC...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTGTGGCTCTTGACTGTTaGCCTCTCCCCAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSVALDC*PLPKAV
Trigger: TACTGCCTTGGGGAGAGGCCAACAGTCAAGAGCCAC...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAAGCACAAGGCTCCCTTaGCGCTTTCCAGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGISTRLP*RFPDKQ
Trigger: CTGCTTGTCTGGAAAGCGCCAAGGGAGCCTTGTGCT...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGATGGTGTTGGAAGTaGGTCAGCGATGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAGWCWK*VSDADS
Trigger: GCTGTCTGCATCGCTGACCCACTTCCAACACCATCC...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTTCTTGGGATGGTGTTaGAAGTGGGTCAGCGATGCA +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTFLGWC*KWVSDA
Trigger: TGCATCGCTGACCCACTTCCAACACCATCCCAAGAA...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AAGATGAGACCTTCCTTTTATACCCTGTTGAGAATCTCAGGTGGACAACGTGACTTGCTTCAGTTAGGATaGAGTGGGAAAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: KMRPSFYTLLRISGGQRDLLQLG*SGKVAQ
Trigger: TTGGGCCACTTTCCCACTCCATCCTAACTGAAGCAA...GTCACGTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCCCGGCAGGGCAGTCTaGAAAATCGCCTGGGACATT +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPPGRAV*KIAWDI
Trigger: AATGTCCCAGGCGATTTTCCAGACTGCCCTGCCGGG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACCTGTGGCAGCAACATaGTTTTCACTGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIPVAAT*FSLASW
Trigger: CCAGGAGGCCAGTGAAAACCATGTTGCTGCCACAGG...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCTTAGAGGTGACTCCCTGTaGCAGCAACATGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KLCLPENRQKSVVHDFSLRGDSL*QQHGFH
Trigger: GTGAAAACCATGTTGCTGCCACAGGGAGTCACCTCT...AAGAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAACAGGCAAGCCTCTCTaGTCAATCCTTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGITGKPL*SILAGL
Trigger: GAGGCCAGCAAGGATTGACCAGAGAGGCTTGCCTGT...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGGAGGAAGTCCTCCTTaGCTGGGACACAGATCATGG +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQGGSPP*LGHRSW
Trigger: CCATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAAGAAGAGGCACGTCCTaGCTTCTGCCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIRRGTS*LLPLLP
Trigger: AGGGAGAAGAGGCAGAAGCCAGGACGTGCCTCTTCT...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTTCCAGCCTAGGAGAGTTCTaGAGCAGTGCAACGTCACAC +
Preference number: 4 (lower is better)
Translates to: TIISFLEIRNAHYHMEVSSLGEF*SSATSH
Trigger: GTGTGACGTTGCACTGCTCCAGAACTCTCCTAGGCT...GGAAACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATTTATCTATGCCCTGCTaGGATACAAGCACGCATTCA +
Preference number: 4 (lower is better)
Translates to: PTLPVRQDETFLLYPVENLSMPC*DTSTHS
Trigger: TGAATGCGTGCTTGTATCCCAGCAGGGCATAGATAA...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTCAGCAGCTCGTGCTTaGGCAAAAGTAGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTSAARA*AKVEAV
Trigger: AACTGCTTCTACTTTTGCTCAAGCACGAGCTGCTGA...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTCACTTCTTGACCATATaGAACCGCTTGGCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSHFLTI*NRLACQ
Trigger: CTGGCACGCCAAGCGGTTTCATATGGTCAAGAAGTG...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATATGCAGACAGCTGATTTaGTGGGTTCCACACACTGGC +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGICRQLI*WVPHTG
Trigger: GCCAGTGTGTGGAACCCATCAAATCAGCTGTCTGCA...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AAGATGAGACCTTCCTTTTATACCCTGTTGAGAATCTCAGGTGGACAACGTGACCGGAATTTCTGCTGGTaGTGTTATTCCTCCCAACAA +
Preference number: 4 (lower is better)
Translates to: KMRPSFYTLLRISGGQRDRNFCW*CYSSQQ
Trigger: TTGTTGGGAGGAATAACATCACCAGCAGAAATTCCG...GTCACGTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTCTTGACTCCCAGTCTTaGGTTAACTGCTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPALDSQS*VNCSQG
Trigger: TCCCTGGGAGCAGTTAACTCAAGACTGGGAGTCAAG...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAATCACCTCCACTGTGGTaGTTTACACCTCTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQSPPLW*FTPLSA
Trigger: GGCTGACAGAGGTGTAAAGCACCACAGTGGAGGTGA...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGGGACAGCAGAAAGGTaGCAGAGTGCCAAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQGTAER*QSAKLN
Trigger: GTTAAGCTTGGCACTCTGGCACCTTTCTGCTGTCCC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTCCTGGCTTCTaGCTCTTCTCCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQARPGF*LFSLFF
Trigger: GAAGAAAAGGGAGAAGAGGCAGAAGCCAGGACGTGC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCAGAGTTCTGGAGCAGTaGAACGTCACACGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCRVLEQ*NVTRGR
Trigger: TCTGCCGCGTGTGACGTTGCACTGCTCCAGAACTCT...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTAGCACAAGGCTCCCTTaGCGCTTTCCAGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPSTRLP*RFPDKQ
Trigger: CTGCTTGTCTGGAAAGCGCCAAGGGAGCCTTGTGCT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATGCCCAAGCATTTCTCTaGGATATTTATTCACCCGAT +
Preference number: 4 (lower is better)
Translates to: PTLPVRQDETFLLYPVENAQAFL*DIYSPD
Trigger: ATCGGGTGAATAAATATCCCAGAGAAATGCTTGGGC...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAATCACCCGGGGTCCTCTaGGACTTCCAGATAAACGTA +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQSPGVL*DFQINV
Trigger: TACGTTTATCTGGAAGTCCCAGAGGACCCCGGGTGA...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGATCCTGTTTAAGGGTTaGATGCAGCCAGATCCACAG +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTILFKG*MQPDPQ
Trigger: CTGTGGATCTGGCTGCATCCAACCCTTAAACAGGAT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGATGGGTTCCACACACTaGCACGCTGCTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTMGSTH*HAAFIS
Trigger: GGAAATAAAAGCAGCGTGCCAGTGTGTGGAACCCAT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTTGCTTCAGTTAGGATaGAGTGGGAAAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTLLQLG*SGKVAQ
Trigger: TTGGGCCACTTTCCCACTCCATCCTAACTGAAGCAA...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCCCAACAACTCGAAAATaGCTTCTTGTCTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCPTTRK*LLVCNE
Trigger: TTCATTGCAGACAAGAAGCCATTTTCGAGTTGTTGG...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCCTCTTACAGATATCTTaGTTCCAGATAAAGCTATGC +
Preference number: 4 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCLLQIS*FQIKLC
Trigger: GCATAGCTTTATCTGGAACCAAGATATCTGTAAGAG...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCCTGGGGTGCTCTATaGATGTGCCCACTTCATCAG +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCPWGAL*MCPLHQ
Trigger: CTGATGAAGTGGGCACATCCATAGAGCACCCCAGGG...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATATTTTCACTGGCCTCCTaGTCTGTGATCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIFSLAS*SVILSG
Trigger: GCCTGAGAGGATCACAGACCAGGAGGCCAGTGAAAA...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGACTATCCTCAGAACTaGGCCCACACCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPDYPQN*AHTRLT
Trigger: TGTCAGCCTGGTGTGGGCCCAGTTCTGAGGATAGTC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCAGTCCTCATGGAGCTaGAGGAAGTCCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPQSSWS*RKSSLA
Trigger: AGCCAAGGAGGACTTCCTCCAGCTCCATGAGGACTG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAATGGGTCACTGTGTTTaGATTCCTGGGGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIMGHCV*IPGAHS
Trigger: ACTGTGGGCCCCAGGAATCCAAACACAGTGACCCAT...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAAGCCTAGGAGAGTTCTaGAGCAGTGCAACGTCACAC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQSLGEF*SSATSH
Trigger: GTGTGACGTTGCACTGCTCCAGAACTCTCCTAGGCT...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp ACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTTCCTCAGCAGCTCGTGCTTaGGCAAAAGTAGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: TIISFLEIRNAHYHMEVSSAARA*AKVEAV
Trigger: AACTGCTTCTACTTTTGCTCAAGCACGAGCTGCTGA...GGAAACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGTTGGCGTGCCAGATGTaGGTTTCTAACCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGLACQM*VSNQMF
Trigger: GAACATTTGGTTAGAAACTCACATCTGGCACGCCAA...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCACTTCTTGACCATATaGAACCGCTTGGCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPHFLTI*NRLACQ
Trigger: CTGGCACGCCAAGCGGTTTCATATGGTCAAGAAGTG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAAGTAGCCCCACTTCTTaGCCATATGAAACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQSSPTS*PYETAW
Trigger: CCAAGCGGTTTCATATGGTCAAGAAGTGGGGCTACT...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAATTTCCAGACAAGCAGTaGACTGCTGCAAACGTCAGC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQFPDKQ*TAANVS
Trigger: GCTGACGTTTGCAGCAGTTCACTGCTTGTCTGGAAA...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAGCGATGCAGACAGCTaGTTTGATGGGTTCCACACA +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPASDADS*FDGFHT
Trigger: TGTGTGGAACCCATCAAATCAGCTGTCTGCATCGCT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGCTTCTTGTCTGCAATaGAGGGAAACGCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAASCLQ*RETLSG
Trigger: ACCTGACAGCGTTTCCCTTCATTGCAGACAAGAAGC...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGGGTTGACTCTGGTTTaGCGCTGTCGTGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCGLTLV*RCREVP
Trigger: TGGAACTTCACGACAGCGGCAAACCAGAGTCAACCC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAAGACAAGCAGTGAACTaGTGCAAACGTCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIRQAVN*CKRQPC
Trigger: ACAGGGCTGACGTTTGCAGCAGTTCACTGCTTGTCT...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAAGACAAGCAGTGAACTaGTGCAAACGTCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQRQAVN*CKRQPC
Trigger: ACAGGGCTGACGTTTGCAGCAGTTCACTGCTTGTCT...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGTAGTTGGGCCGTTTTaGAGGAGGGCGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQVVGPF*RRASFV
Trigger: TACAAAAGACGCCCTCCTGCAAAACGGCCCAACTAC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGGGACAGCAGAAAGGTaGCAGAGTGCCAAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPGTAER*QSAKLN
Trigger: GTTAAGCTTGGCACTCTGGCACCTTTCTGCTGTCCC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAGGTGCTCTATGGATGTaGCCACTTCATCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIGALWM*PLHQMA
Trigger: AGCCATCTGATGAAGTGGGCACATCCATAGAGCACC...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGGTATTATCTATGCCCTaGTGGGATACAAGCACGCAT +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGVLSMP*WDTSTH
Trigger: ATGCGTGCTTGTATCCCAGCAGGGCATAGATAATAC...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGACTACTGTACCACCTaGTGTATCCTTCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCDYCTT*CILPHL
Trigger: GAGGTGGGGAAGGATACAGCAGGTGGTACAGTAGTC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGTTTTCACCTCCACTGTaGTGCTTTACACCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGFSPPL*CFTPLS
Trigger: TGACAGAGGTGTAAAGCACCACAGTGGAGGTGAAAA...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp CCTTCCCCACCTCATCACCCCCAAAGCCATTTAGTGCCAAATGCTACAGTAAAAGAATTCGAAGACTTCTaGGTCACAGCTTTTAACATA +
Preference number: 4 (lower is better)
Translates to: PSPPHHPQSHLVPNATVKEFEDF*VTAFNI
Trigger: TATGTTAAAAGCTGTGACCCAGAAGTCTTCGAATTC...TTTTACTGTAGCATTTGGCACTAAATGGCTTTGGGGGTGATGAGGTGGGGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCTCGTCGCATGTGCCGTaGCAGAGTCTGAAAAACCAG +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCSSHVP*QSLKNQ
Trigger: CTGGTTTTTCAGACTCTGCCACGGCACATGCGACGA...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TGGGTTGGATCCAAAGACATTCAGAGGCATGGTAAGAGGCAAAGCATCAGACATGGTATCTTGGATTCATaGGGACCTAAAATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: WVGSKDIQRHGKRQSIRHGILDS*GPKISC
Trigger: ACAGCTTATTTTAGGTCCCCATGAATCCAAGATACC...ATGTCTGATGCTTTGCCTCTTACCATGCCTCTGAATGTCTTTGGATCCAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGTCTGGAAAATCGCCTaGGACATTAGGCGACCTCTT +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQVWKIA*DIRRPL
Trigger: AAGAGGTCGCCTAATGTCCCAGGCGATTTTCCAGAC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCTTTTCACTGGCCTCCTaGTCTGTGATCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCFSLAS*SVILSG
Trigger: GCCTGAGAGGATCACAGACCAGGAGGCCAGTGAAAA...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAGAGGTGACTCCCTGTaGCAGCAACATGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPARGDSL*QQHGFH
Trigger: GTGAAAACCATGTTGCTGCCACAGGGAGTCACCTCT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGGATCTTGCTCCTGAATaGGTCACTGTGTTTGGATTC +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGDLAPE*VTVFGF
Trigger: GAATCCAAACACAGTGACCCATTCAGGAGCAAGATC...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTAGCGTCCGGTTCATGTaGCATCTTCGAGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPSVRFM*HLRALW
Trigger: CCATAAAGCTCGAAGATGTCACATGAACCGGACGCT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTTCTTGTCTGCAATaGAGGGAAACGCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPASCLQ*RETLSG
Trigger: ACCTGACAGCGTTTCCCTTCATTGCAGACAAGAAGC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGGCGACCTCTTATACTaGGAATGCACTGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPGDLLY*ECTADS
Trigger: AGAGTCTGCAGTGCATTCTCAGTATAAGAGGTCGCC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGGCGACCTCTTATACTaGGAATGCACTGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCGDLLY*ECTADS
Trigger: AGAGTCTGCAGTGCATTCTCAGTATAAGAGGTCGCC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTCCTGTGAGGCAAGATaGGACCTTCCTTTTATACCC +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSSCEAR*DLPFIP
Trigger: GGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGA...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGAAATGGCTTCTTGTCTaGAATGAAGGGAAACGCTGT +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGKWLLV*NEGKRC
Trigger: ACAGCGTTTCCCTTCATTGCAGACAAGAAGCCATTT...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ATAAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCAGAAGATTCTTAGCTTaGTCTTCCGCAAACAGCATC +
Preference number: 4 (lower is better)
Translates to: INCACLKTGRNQLSMISLRRFLA*SSANSI
Trigger: GATGCTGTTTGCGGAAGAGCAAGCTAAGAATCTTCT...GAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCTTCTCCGCCTCTTTCTaGGCAATCTCCTGTAACCGT +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCFSASF*AISCNR
Trigger: ACGGTTACAGGAGATTGCCCAGAAAGAGGCGGAGAA...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTCCATATGAAACCGCTTaGCGTGCCAGATGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAPYETA*RARCEF
Trigger: AAACTCACATCTGGCACGCCAAGCGGTTTCATATGG...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCTTCTTGGGATGGTGTTaGAAGTGGGTCAGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCFLGWC*KWVSDA
Trigger: TGCATCGCTGACCCACTTCCAACACCATCCCAAGAA...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATTTTTTCAGTCTCATCTaGGTTGGATCCAAAGACATT +
Preference number: 4 (lower is better)
Translates to: PTLPVRQDETFLLYPVENFFSLI*VGSKDI
Trigger: AATGTCTTTGGATCCAACCCAGATGAGACTGAAAAA...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTCTTTCTTTTGCATTTaGCATTTAAGGGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTSFFCI*HLRDLG
Trigger: GCCCAGATCCCTTAAATGTCAAATGCAAAAGAAAGA...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349693.3
CDS-3UTR TCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCTGCCGTGGCAGAGTCTaGAAAACCAGTGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCCRGRV*KTSEFE
Trigger: TTCGAATTCACTGGTTTTTCAGACTCTGCCACGGCA...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGACTTTTCCTGGCTGCTaGATCAAAAGTATAGGTATC +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTTFPGC*IKSIGI
Trigger: GATACCTATACTTTTGATTCAGCAGCCAGGAAAAGT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp ATAAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCACTTTTCCTGGCTGCTaGATCAAAAGTATAGGTATC +
Preference number: 4 (lower is better)
Translates to: INCACLKTGRNQLSMISLTFPGC*IKSIGI
Trigger: GATACCTATACTTTTGATTCAGCAGCCAGGAAAAGT...GAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp ACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTTCCTCTTTCTTTTGCATTTaGCATTTCTGCCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: TIISFLEIRNAHYHMEVSSFFCI*HFCQTL
Trigger: CAGCGTCTGGCAGAAATGTCAAATGCAAAAGAAAGA...GGAAACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp ACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTTCCTCTCTCTTTAAGGCTTaGGTTGTTCGGCATGGAAAT +
Preference number: 4 (lower is better)
Translates to: TIISFLEIRNAHYHMEVSSLFKA*VVRHGN
Trigger: ATTTCCATGCCGAACAACTCAAGCCTTAAAGAGAGA...GGAAACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGGTTTCCATATCAACCTaGCCTTGGAATCTCTTACTT +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGVSIST*PWNLLL
Trigger: AAGTAAGAGATTCCAAGGTCAGGTTGATATGGAAAC...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTCCTTTTATACCCTGTTaGGAATCTCAGGTGGACAAC +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSPFIPC*ESQVDN
Trigger: GTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGG...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTTTGGAGGAAGACTaGTCATTCACTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCPLEED*SFTSGS
Trigger: TGACCCTGAAGTGAATGAGCAGTCTTCCTCCAAAGG...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTGATTTCAGCAGCTCGTaGTTGAGCAAAAGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSDFSSS*LSKSRS
Trigger: GCTTCTACTTTTGCTCAAGCACGAGCTGCTGAAATC...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAATACTGAGAATGCACTaGAGACTCTTTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQILRMH*RLFQPS
Trigger: GGAGGGTTGAAAGAGTCTGCAGTGCATTCTCAGTAT...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTATACTGAGAATGCACTaGAGACTCTTTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSILRMH*RLFQPS
Trigger: GGAGGGTTGAAAGAGTCTGCAGTGCATTCTCAGTAT...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTTTTCACCTCCACTGTaGTGCTTTACACCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSFSPPL*CFTPLS
Trigger: TGACAGAGGTGTAAAGCACCACAGTGGAGGTGAAAA...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAAGCAGTTATATACTTaGGGATCTCCTGAGACGTGC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAKQLYT*GSPETC
Trigger: GCACGTCTCAGGAGATCCCCAAGTATATAACTGCTT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTATGGGTTCCACACACTaGCACGCTGCTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPMGSTH*HAAFIS
Trigger: GGAAATAAAAGCAGCGTGCCAGTGTGTGGAACCCAT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGCCAACAACTCGAAAATaGCTTCTTGTCTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTPTTRK*LLVCNE
Trigger: TTCATTGCAGACAAGAAGCCATTTTCGAGTTGTTGG...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGATCTTGGCATTTTTCTaGATTGGGCAAAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTILAFF*IGQSFG
Trigger: TCCAAAGCTTTGCCCAATCCAGAAAAATGCCAAGAT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGGGTATCTTGGATTCATaGGGACCTAAAATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTGILDS*GPKISC
Trigger: ACAGCTTATTTTAGGTCCCCATGAATCCAAGATACC...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAAGTCTGAAAAACCAGTaGATTCGAAGACTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQSLKNQ*IRRLLG
Trigger: ACCCAGAAGTCTTCGAATTCACTGGTTTTTCAGACT...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCGGAATTTCTGCTGGTaGTGTTATTCCTCCCAACAA +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPRNFCW*CYSSQQ
Trigger: TTGTTGGGAGGAATAACATCACCAGCAGAAATTCCG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACTTACCATTTGGAGATaGAGCTACAGAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGILTIWR*SYRRFF
Trigger: GAAGAACCTTCTGTAGCTTCATCTCCAAATGGTAAG...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTCTTACCATTTGGAGATaGAGCTACAGAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPALTIWR*SYRRFF
Trigger: GAAGAACCTTCTGTAGCTTCATCTCCAAATGGTAAG...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTATGGAAAAATCTCCCTaGGTCACAAAGCCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPMEKSP*VTKPRR
Trigger: TCTCCTAGGCTTTGTGACTCAGGGAGATTTTTCCAT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGGAAATCAGTTGTCCATaGTTTCTCTCTTTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTEISCP*FLSLRL
Trigger: AAGCCTTAAAGAGAGAAATCATGGACAACTGATTTC...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR GCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGATTTCAGCAGCTCGTaGTTGAGCAAAAGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCDFSSS*LSKSRS
Trigger: GCTTCTACTTTTGCTCAAGCACGAGCTGCTGAAATC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAAATGGCTTCTTGTCTaGAATGAAGGGAAACGCTGT +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAKWLLV*NEGKRC
Trigger: ACAGCGTTTCCCTTCATTGCAGACAAGAAGCCATTT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAGAAGATTCTTAGCTTaGTCTTCCGCAAACAGCATC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPARRFLA*SSANSI
Trigger: GATGCTGTTTGCGGAAGAGCAAGCTAAGAATCTTCT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTCACCAGGCTGACAGTTaGTTCAGTAATTTTCTACTC +
Preference number: 4 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAHQADS*FSNFLL
Trigger: GAGTAGAAAATTACTGAAGCAACTGTCAGCCTGGTG...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGATTGGGCAAAGCTTTaGACTTCTTTTGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQDWAKL*TSFGAN
Trigger: ATTTGCCCCAAAAGAAGTCCAAAGCTTTGCCCAATC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTGATTGGGCAAAGCTTTaGACTTCTTTTGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSDWAKL*TSFGAN
Trigger: ATTTGCCCCAAAAGAAGTCCAAAGCTTTGCCCAATC...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGATCTTGCTCCTGAATaGGTCACTGTGTTTGGATTC +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCDLAPE*VTVFGF
Trigger: GAATCCAAACACAGTGACCCATTCAGGAGCAAGATC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCTTATCTATGCCCTGCTaGGATACAAGCACGCATTCA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCLSMPC*DTSTHS
Trigger: TGAATGCGTGCTTGTATCCCAGCAGGGCATAGATAA...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTTGAGTTGTTCGGCATaGAAATCACAGTACAGAATT +
Preference number: 4 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTLSCSA*KSQYRI
Trigger: AATTCTGTACTGTGATTTCCATGCCGAACAACTCAA...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
3UTR CAA 72 bp GCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTaGTCTTCTGCTATAACAGTGAAATCATTAAACATC +
Preference number: 4 (lower is better)
Translates to: AHISCTEAKRLL*SSAITVKSLNI
Trigger: GATGTTTAATGATTTCACTGTTATAGCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCAGTCTGAAAAACCAGTaGATTCGAAGACTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCSLKNQ*IRRLLG
Trigger: ACCCAGAAGTCTTCGAATTCACTGGTTTTTCAGACT...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTATAACGTATTATCTATaGCCTGCTGGGATACAAGCA +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSITYYL*PAGIQA
Trigger: TGCTTGTATCCCAGCAGGGCATAGATAATACGTTAT...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGCCCAAGCATTTCTCTaGGATATTTATTCACCCGAT +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCAQAFL*DIYSPD
Trigger: ATCGGGTGAATAAATATCCCAGAGAAATGCTTGGGC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTGCTTTGGACTTCTTTTaGGGCAAATTTATTCGAGGA +
Preference number: 4 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSALDFF*GKFIRG
Trigger: TCCTCGAATAAATTTGCCCCAAAAGAAGTCCAAAGC...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATGCACATTATCACATaGAAGTTTCCAGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: STCRTWQTIITYYLCPAGMHIIT*KFPEVL
Trigger: AAGAACTTCTGGAAACTTCCATGTGATAATGTGCAT...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR TCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAATCCGGTTTAAATCCTaGTCCGAGATTTTATTCTCT +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIIRFKS*SEILFS
Trigger: AGAGAATAAAATCTCGGATCAGGATTTAAACCGGAT...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR GCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCATAACGTATTATCTATaGCCTGCTGGGATACAAGCA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCITYYL*PAGIQA
Trigger: TGCTTGTATCCCAGCAGGGCATAGATAATACGTTAT...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGAATTCGAAGACTTCTaGGTCACAGCTTTTAACATA +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQEFEDF*VTAFNI
Trigger: TATGTTAAAAGCTGTGACCCAGAAGTCTTCGAATTC...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGCTTTGGACTTCTTTTaGGGCAAATTTATTCGAGGA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCALDFF*GKFIRG
Trigger: TCCTCGAATAAATTTGCCCCAAAAGAAGTCCAAAGC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAACTCTTACAGATATCTTaGTTCCAGATAAAGCTATGC +
Preference number: 4 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQLLQIS*FQIKLC
Trigger: GCATAGCTTTATCTGGAACCAAGATATCTGTAAGAG...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR TCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTATCCGGTTTAAATCCTaGTCCGAGATTTTATTCTCT +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPIRFKS*SEILFS
Trigger: AGAGAATAAAATCTCGGATCAGGATTTAAACCGGAT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATATCCACATGTAGAACTTaGCAGACAATAATAACGTAT +
Preference number: 4 (lower is better)
Translates to: TCRTWQTIITYYLCPAGISTCRT*QTIITY
Trigger: ATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CCA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCAGTAGGATCAAGTGTTaGTCAACAACAAAGAGATCA +
Preference number: 4 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCSRIKC*STTKRS
Trigger: TGATCTCTTTGTTGTTGACCAACACTTGATCCTACT...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CCA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTTCCACATGTAGAACTTaGCAGACAATAATAACGTAT +
Preference number: 4 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPSTCRT*QTIITY
Trigger: ATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp ACACGCGGCAGAGGGCCTGACCACAGCCCTAGAGTCAGAGCTTCCTaGCCAGCCACGGGCTCTTCCCCCGCCGGGCCATCAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: TRGRGPDHSPRVRAS*PATGSSPAGPSEEA
Trigger: TGCCTCTTCTGATGGCCCGGCGGGGGAAGAGCCCGTGGCTGGGCAGGAAGCTCTGACTCTAGGGCTGTGGTCAGGCCCTCTGCCGCGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp CCAAGATGGACAGGCAAGCCTCTCTGGTCAATCCTTGCTGGCCTCTaGCGGGAGCTCGCCGGCCTCCCCGACTATCCTCAGAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: PRWTGKPLWSILAGL*RELAGLPDYPQNWA
Trigger: GGCCCAGTTCTGAGGATAGTCGGGGAGGCCGGCGAGCTCCCGGCAGAGGCCAGCAAGGATTGACCAGAGAGGCTTGCCTGTCCATCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 90 bp TGGAGCTGGAGGAAGTCCTCCTTGGCTGGGACACAGATCATGGTGTaGGGCTCGGGGCTGCCCTTGCTGAGCAGGGACAGGCTGACCCAA +
Preference number: 5 (lower is better)
Translates to: WSWRKSSLAGTQIMV*GSGLPLLSRDRLTQ
Trigger: TTGGGTCAGCCTGTCCCTGCTCAGCAAGGGCAGCCCCGAGCCTCACACCATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCCAGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp CGATACTGCAGAGAGGCGGGAGGCCTCAGTAGCACTAAGCCCCTCTaGGCTGCAGGCTGGCTGGACAGCATATCCAGCAAGCCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: RYCREAGGLSSTKPL*AAGWLDSISSKPVK
Trigger: CTTGACAGGCTTGCTGGATATGCTGTCCAGCCAGCCTGCAGCGCAGAGGGGCTTAGTGCTACTGAGGCCTCCCGCCTCTCTGCAGTATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 90 bp GGCCTCTGCCGGGAGCTCGCCGGCCTCCCCGACTATCCTCAGAACTaGGCCCACACCAGGCTGACAGTTGCTTCAGTAATTTTCTACTCC +
Preference number: 5 (lower is better)
Translates to: GLCRELAGLPDYPQN*AHTRLTVASVIFYS
Trigger: GGAGTAGAAAATTACTGAAGCAACTGTCAGCCTGGTGTGGGCCCAGTTCTGAGGATAGTCGGGGAGGCCGGCGAGCTCCCGGCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 90 bp TTGCTGAGCAGGGACAGGCTGACCCAAACCAGGGCCCTGGGGAAGTaGCCCAAGATGGACAGGCAAGCCTCTCTGGTCAATCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LLSRDRLTQTRALGK*PKMDRQASLVNPCW
Trigger: CCAGCAAGGATTGACCAGAGAGGCTTGCCTGTCCATCTTGGGCCACTTCCCCAGGGCCCTGGTTTGGGTCAGCCTGTCCCTGCTCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 90 bp GCCCACAGTAATGCCAGTCCTCATGGAGCTGGAGGAAGTCCTCCTTaGCTGGGACACAGATCATGGTGTGAGGCTCGGGGCTGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: AHSNASPHGAGGSPP*LGHRSWCEARGCPC
Trigger: GCAAGGGCAGCCCCGAGCCTCACACCATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCCAGCTCCATGAGGACTGGCATTACTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 90 bp CCGCCTCTTTCTGGGCAATCTCCTGTAACCGTCTGGGAAGGCGTTTaGCGTTGTGGCTCATGGCTCTTCGTCGCATGTGCCGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PPLSGQSPVTVWEGV*RCGSWLFVACAVAE
Trigger: CTCTGCCACGGCACATGCGACGAAGAGCCATGAGCCACAACGTCAAACGCCTTCCCAGACGGTTACAGGAGATTGCCCAGAAAGAGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000522319.5
CDS CCA 90 bp ACAGTAATGCCAGTCCTCATGGAGCTGGAGGAAGTCCTCCTTGGCTaGGACACAGATCATGGTGTGAGGCTCGGGGCTGCCCTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TVMPVLMELEEVLLG*DTDHGVRLGAALAE
Trigger: CTCAGCAAGGGCAGCCCCGAGCCTCACACCATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCCAGCTCCATGAGGACTGGCATTACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp CTCAGGCCCTGCCGATTCTTGACACCCTGCATCCATTACCTCCTCTaGCTCCCTGGGGTGCTCTATGGATGTGCCCACTTCATCAGATGG +
Preference number: 5 (lower is better)
Translates to: LRPCRFLTPCIHYLL*LPGVLYGCAHFIRW
Trigger: CCATCTGATGAAGTGGGCACATCCATAGAGCACCCCAGGGAGGCAGAGGAGGTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS GCA 90 bp CTCCTGGTCTGTGATCCTCTCAGGCCCTGCCGATTCTTGACACCCTaGATCCATTACCTCCTCTGCCTCCCTGGGGTGCTCTATGGATGT +
Preference number: 5 (lower is better)
Translates to: LLVCDPLRPCRFLTP*IHYLLCLPGVLYGC
Trigger: ACATCCATAGAGCACCCCAGGGAGGCAGAGGAGGTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCCTGAGAGGATCACAGACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS CCA 90 bp AGCCACGGGCTCTTCCCCCGCCGGGCCATCAGAAGAGGCACGTCCTaGCTTCTGCCTCTTCTCCCTTTTCTTCTTCTCTTTCTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SHGLFPRRAIRRGTS*LLPLLPFLLLFLFQ
Trigger: CTGAAACAGAAAGAGAAGAAGAAAAGGGAGAAGAGGCAGAAGCCAGGACGTGCCTCTTCTGATGGCCCGGCGGGGGAAGAGCCCGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCGGCTCGGGGCTGCCCTaGCTGAGCAGGGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCGSGLP*LSRDRL
Trigger: CAGCCTGTCCCTGCTCAGCAAGGGCAGCCCCGAGCC...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS CCA 90 bp CAGATCCACAGCTGCCTGCTCTCAGAAGGGTCACCCGGGGTCCTCTaGGACTTCCAGATAAACGTAACAGGCCCAAGCATTTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: QIHSCLLSEGSPGVL*DFQINVTGPSISLG
Trigger: TCCCAGAGAAATGCTTGGGCCTGTTACGTTTATCTGGAAGTCCCAGAGGACCCCGGGTGACCCTTCTGAGAGCAGGCAGCTGTGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 90 bp GACTCCCTGTGGCAGCAACATGGTTTTCACTGGCCTCCTGGTCTGTaGTCCTCTCAGGCCCTGCCGATTCTTGACACCCTGCATCCATTA +
Preference number: 5 (lower is better)
Translates to: DSLWQQHGFHWPPGL*SSQALPILDTLHPL
Trigger: TAATGGATGCAGGGTGTCAAGAATCGGCAGGGCCTGAGAGGATCACAGACCAGGAGGCCAGTGAAAACCATGTTGCTGCCACAGGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS GCA 90 bp TCTAAGATATCCTGTTTAAGGGTTGGATGCAGCCAGATCCACAGCTaGCTGCTCTCAGAAGGGTCACCCGGGGTCCTCTGGGACTTCCAG +
Preference number: 5 (lower is better)
Translates to: SKISCLRVGCSQIHS*LLSEGSPGVLWDFQ
Trigger: CTGGAAGTCCCAGAGGACCCCGGGTGACCCTTCTGAGAGCAGGCAGCTGTGGATCTGGCTGCATCCAACCCTTAAACAGGATATCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp AACATGGTTTTCACTGGCCTCCTGGTCTGTGATCCTCTCAGGCCCTaGCGATTCTTGACACCCTGCATCCATTACCTCCTCTGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: NMVFTGLLVCDPLRP*RFLTPCIHYLLCLP
Trigger: AGGGAGGCAGAGGAGGTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCCTGAGAGGATCACAGACCAGGAGGCCAGTGAAAACCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS CCA 90 bp CCGGTTCGTCATGGCTCGATAGCAGGCTCTGTGGCTCTTGACTGTTaGCCTCTCCCCAAGGCAGTAGCCCCACTTCTTGACCATATGAAA +
Preference number: 5 (lower is better)
Translates to: PVRHGSIAGSVALDC*PLPKAVAPLLDHMK
Trigger: TTTCATATGGTCAAGAAGTGGGGCTACTGCCTTGGGGAGAGGCCAACAGTCAAGAGCCACAGAGCCTGCTATCGAGCCATGACGAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 90 bp CTGCCGATTCTTGACACCCTGCATCCATTACCTCCTCTGCCTCCCTaGGGTGCTCTATGGATGTGCCCACTTCATCAGATGGCTGATGAG +
Preference number: 5 (lower is better)
Translates to: LPILDTLHPLPPLPP*GALWMCPLHQMADE
Trigger: CTCATCAGCCATCTGATGAAGTGGGCACATCCATAGAGCACCCCAGGGAGGCAGAGGAGGTAATGGATGCAGGGTGTCAAGAATCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS CCA 90 bp CTCTTCCGCAAACAGCATCCCGGCAGGGCAGTCTGGAAAATCGCCTaGGACATTAGGCGACCTCTTATACTGAGAATGCACTGCAGACTC +
Preference number: 5 (lower is better)
Translates to: LFRKQHPGRAVWKIA*DIRRPLILRMHCRL
Trigger: GAGTCTGCAGTGCATTCTCAGTATAAGAGGTCGCCTAATGTCCCAGGCGATTTTCCAGACTGCCCTGCCGGGATGCTGTTTGCGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 90 bp AACCCCAGGGCTTCTCCACAGCCAACAGCCATGGAAAAATCTCCCTaGGTCACAAAGCCTAGGAGAGTTCTGGAGCAGTGCAACGTCACA +
Preference number: 5 (lower is better)
Translates to: NPRASPQPTAMEKSP*VTKPRRVLEQCNVT
Trigger: TGTGACGTTGCACTGCTCCAGAACTCTCCTAGGCTTTGTGACTCAGGGAGATTTTTCCATGGCTGTTGGCTGTGGAGAAGCCCTGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 90 bp GGGCAGTCTGGAAAATCGCCTGGGACATTAGGCGACCTCTTATACTaGGAATGCACTGCAGACTCTTTCAACCCTCCGACTCTCACACCT +
Preference number: 5 (lower is better)
Translates to: GQSGKSPGTLGDLLY*ECTADSFNPPTLTP
Trigger: AGGTGTGAGAGTCGGAGGGTTGAAAGAGTCTGCAGTGCATTCTCAGTATAAGAGGTCGCCTAATGTCCCAGGCGATTTTCCAGACTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp ATCAGGAGCCCATATTTCATGTACAGAGGCCAAGCGTCTTCTCTTGTCTTCTGCGGCAGAGAATGGGGGTaGACTCTGGTTTGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: IRSPYFMYRGQASSLVFCGREWG*TLVCRC
Trigger: ACAGCGGCAAACCAGAGTCAACCCCCATTCTCTGCC...GCAGAAGACAAGAGAAGACGCTTGGCCTCTGTACATGAAATATGGGCTCCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp CACACTGAGCCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTCGTAGTTGGGCCGTTTaGCAGGAGGGCGTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: HTEPTLPVRQDETFLLYPRSWAV*QEGVFC
Trigger: ACAAAAGACGCCCTCCTGCAAAACGGCCCAACTACG...AGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGGCTCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAGGCTCGGGGCTGCCCTaGCTGAGCAGGGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIGSGLP*LSRDRL
Trigger: CAGCCTGTCCCTGCTCAGCAAGGGCAGCCCCGAGCC...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 90 bp ATTCTTAGCTTGCTCTTCCGCAAACAGCATCCCGGCAGGGCAGTCTaGAAAATCGCCTGGGACATTAGGCGACCTCTTATACTGAGAATG +
Preference number: 5 (lower is better)
Translates to: ILSLLFRKQHPGRAV*KIAWDIRRPLILRM
Trigger: CATTCTCAGTATAAGAGGTCGCCTAATGTCCCAGGCGATTTTCCAGACTGCCCTGCCGGGATGCTGTTTGCGGAAGAGCAAGCTAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 90 bp CTTGGGATGGTGTTGGAAGTGGGTCAGCGATGCAGACAGCTGATTTaGTGGGTTCCACACACTGGCACGCTGCTTTTATTTCCTCTAAGA +
Preference number: 5 (lower is better)
Translates to: LGMVLEVGQRCRQLI*WVPHTGTLLLFPLR
Trigger: TCTTAGAGGAAATAAAAGCAGCGTGCCAGTGTGTGGAACCCATCAAATCAGCTGTCTGCATCGCTGACCCACTTCCAACACCATCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 90 bp CTCCCACAGTGTGGACAGAAGCAGCTTTTATTGCTTCAGTTAGGATaGAGTGGGAAAGTGGCCCAATCAGCCGGAATCTGTTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: LPQCGQKQLLLLQLG*SGKVAQSAGICSSP
Trigger: TGGAGATGAACAGATTCCGGCTGATTGGGCCACTTTCCCACTCCATCCTAACTGAAGCAATAAAAGCTGCTTCTGTCCACACTGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGCAGGCTCTGTGGCTCTaGACTGTTGGCCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTQALWL*TVGLSP
Trigger: TGGGGAGAGGCCAACAGTCAAGAGCCACAGAGCCTG...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TTTTCAGTCTCATCTGGGTTGGATCCAAAGACATTCAGAGGCATGGTAAGAGGCAAGCACAAGGCTCCCTaGGCGCTTTCCAGACAAGCA +
Preference number: 5 (lower is better)
Translates to: FSVSSGLDPKTFRGMVRGKHKAP*ALSRQA
Trigger: TGCTTGTCTGGAAAGCGCCAAGGGAGCCTTGTGCTT...GCCTCTTACCATGCCTCTGAATGTCTTTGGATCCAACCCAGATGAGACTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp CCTTCCCCACCTCATCACCCCCAAAGCCATTTAGTGCCAAATGCTACAGTAAAATTTCTTGGGATGGTGTaGGAAGTGGGTCAGCGATGC +
Preference number: 5 (lower is better)
Translates to: PSPPHHPQSHLVPNATVKFLGMV*EVGQRC
Trigger: GCATCGCTGACCCACTTCCAACACCATCCCAAGAAA...TTTTACTGTAGCATTTGGCACTAAATGGCTTTGGGGGTGATGAGGTGGGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp CACACTGAGCCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTCGTAAGCCTGGACTCTaGACTCCCAGTCTTGAGTTA +
Preference number: 5 (lower is better)
Translates to: HTEPTLPVRQDETFLLYPRKPGL*TPSLEL
Trigger: TAACTCAAGACTGGGAGTCAAGAGTCCAGGCTTACG...AGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGGCTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS TCA 90 bp TTTTTCTTGGGATGGTGTTGGAAGTGGGTCAGCGATGCAGACAGCTaGTTTGATGGGTTCCACACACTGGCACGCTGCTTTTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: FFLGWCWKWVSDADS*FDGFHTLARCFYFL
Trigger: GAGGAAATAAAAGCAGCGTGCCAGTGTGTGGAACCCATCAAATCAGCTGTCTGCATCGCTGACCCACTTCCAACACCATCCCAAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp GCAGAAAGGTGCCAGAGTGCCAAGCTTAACGTAGTTGGGCCGTTTTaGAGGAGGGCGTCTAAAGAAAAACATACAGGAGAACCAATGTTG +
Preference number: 5 (lower is better)
Translates to: AERCQSAKLNVVGPF*RRASKEKHTGEPML
Trigger: CAACATTGGTTCTCCTGTATGTTTTTCTTTAGACGCCCTCCTGCAAAACGGCCCAACTACGTTAAGCTTGGCACTCTGGCACCTTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517435.1
CDS CCA 90 bp ACAGTGTGGACAGAAGCAGCTTTTATTGCTTCAGTTAGGATGGAGTaGGAAAGTGGCCCAATCAGCCGGAATCTGTTCATCTCCATCGTC +
Preference number: 5 (lower is better)
Translates to: TVWTEAAFIASVRME*ESGPISRNLFISIV
Trigger: GACGATGGAGATGAACAGATTCCGGCTGATTGGGCCACTTTCCCACTCCATCCTAACTGAAGCAATAAAAGCTGCTTCTGTCCACACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 90 bp CTCCCTTTTCTTCTTCTCTTTCTGTTTCAGGATCTTGCTCCTGAATaGGTCACTGTGTTTGGATTCCTGGGGCCCACAGTAATGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LPFLLLFLFQDLAPE*VTVFGFLGPTVMPV
Trigger: GACTGGCATTACTGTGGGCCCCAGGAATCCAAACACAGTGACCCATTCAGGAGCAAGATCCTGAAACAGAAAGAGAAGAAGAAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AAGATGAGACCTTCCTTTTATACCCTGTTGAGAATCTCAGGTGGACAACGTGACGGAAGGCGTTTGACGTaGTGGCTCATGGCTCTTCGT +
Preference number: 5 (lower is better)
Translates to: KMRPSFYTLLRISGGQRDGRRLT*WLMALR
Trigger: ACGAAGAGCCATGAGCCACAACGTCAAACGCCTTCC...GTCACGTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGCGTCTGGGAAGGCGTTaGACGTTGTGGCTCATGGCT +
Preference number: 5 (lower is better)
Translates to: STCRTWQTIITYYLCPAGRLGRR*TLWLMA
Trigger: AGCCATGAGCCACAACGTCAAACGCCTTCCCAGACG...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAACTCTCTGGTCAATCCTaGCTGGCCTCTGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQLSGQS*LASAGS
Trigger: GCTCCCGGCAGAGGCCAGCAAGGATTGACCAGAGAG...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTCTCTCTGGTCAATCCTaGCTGGCCTCTGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: FSTCRTWQTIITYYLCPALSGQS*LASAGS
Trigger: GCTCCCGGCAGAGGCCAGCAAGGATTGACCAGAGAG...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGAAGCACAAGGCTCCCTaGGCGCTTTCCAGACAAGCA +
Preference number: 5 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTKHKAP*ALSRQA
Trigger: TGCTTGTCTGGAAAGCGCCAAGGGAGCCTTGTGCTT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCCATGCCCCAGCCCTTaGGGAGTAGGACATCCCAGC +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPPCPSP*GVGHPS
Trigger: GCTGGGATGTCCTACTCCCAAAGGGCTGGGGCATGG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCATGCCCCAGCCCTTaGGGAGTAGGACATCCCAGC +
Preference number: 5 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCPCPSP*GVGHPS
Trigger: GCTGGGATGTCCTACTCCCAAAGGGCTGGGGCATGG...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGACTACTGTACCACCTGCGCAGGAGGGCGTCTTTaGTACTTTTCAAGAAGATTC +
Preference number: 5 (lower is better)
Translates to: KHQTSHWWQVLPDYCTTCAGGRL*YFSRRF
Trigger: GAATCTTCTTGAAAAGTACAAAAGACGCCCTCCTGC...GCAGGTGGTACAGTAGTCAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGTGGAGGAAGTCCTCCTaGGCTGGGACACAGATCATG +
Preference number: 5 (lower is better)
Translates to: STCRTWQTIITYYLCPAGWRKSS*AGTQIM
Trigger: CATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCCA...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TTTTCAGTCTCATCTGGGTTGGATCCAAAGACATTCAGAGGCATGGTAAGAGGCTCCAGGATGAGGCTCTaGTTTTTGAGCTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: FSVSSGLDPKTFRGMVRGSRMRL*FLSLER
Trigger: CCTTTCCAAGCTCAAAAACAAGAGCCTCATCCTGGA...GCCTCTTACCATGCCTCTGAATGTCTTTGGATCCAACCCAGATGAGACTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAGGCAGAGAATGGGGGTaGACTCTGGTTTGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIGREWG*TLVCRC
Trigger: ACAGCGGCAAACCAGAGTCAACCCCCATTCTCTGCC...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTCGTCTGGGAAGGCGTTaGACGTTGTGGCTCATGGCT +
Preference number: 5 (lower is better)
Translates to: FSTCRTWQTIITYYLCPARLGRR*TLWLMA
Trigger: AGCCATGAGCCACAACGTCAAACGCCTTCCCAGACG...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCAGGCTCTGTGGCTCTaGACTGTTGGCCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPQALWL*TVGLSP
Trigger: TGGGGAGAGGCCAACAGTCAAGAGCCACAGAGCCTG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp TTCTCTGTGACACTCTTACAGATATCTTGGTTCCAGATAAAGCTATaGGTACATTCCACAGGCACACCCTCCAGAAGCAGCTGTCTAACT +
Preference number: 5 (lower is better)
Translates to: FSVTLLQISWFQIKL*VHSTGTPSRSSCLT
Trigger: AGTTAGACAGCTGCTTCTGGAGGGTGTGCCTGTGGAATGTACGCATAGCTTTATCTGGAACCAAGATATCTGTAAGAGTGTCACAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp AAAATCGCCTGGGACATTAGGCGACCTCTTATACTGAGAATGCACTaGAGACTCTTTCAACCCTCCGACTCTCACACCTCGATAAATAAA +
Preference number: 5 (lower is better)
Translates to: KIAWDIRRPLILRMH*RLFQPSDSHTSINK
Trigger: TTTATTTATCGAGGTGTGAGAGTCGGAGGGTTGAAAGAGTCTGCAGTGCATTCTCAGTATAAGAGGTCGCCTAATGTCCCAGGCGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGGCATGGTAAGAGGCAAAGCATCAGACATCTCATTGGTGGCAGGTACTTCCTGTTCTTTCTTTTGCATTaGACATTTCTGCCAGACGCT +
Preference number: 5 (lower is better)
Translates to: RHGKRQSIRHLIGGRYFLFFLLH*TFLPDA
Trigger: AGCGTCTGGCAGAAATGTCAAATGCAAAAGAAAGAA...CAGGAAGTACCTGCCACCAATGAGATGTCTGATGCTTTGCCTCTTACCATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS TCA 90 bp GATGTTATTCCTCCCAACAACTCGAAAATGGCTTCTTGTCTGCAATaGAGGGAAACGCTGTCAGGTTTCTTACAGGTTTCTATCCACCAG +
Preference number: 5 (lower is better)
Translates to: DVIPPNNSKMASCLQ*RETLSGFLQVSIHQ
Trigger: CTGGTGGATAGAAACCTGTAAGAAACCTGACAGCGTTTCCCTTCATTGCAGACAAGAAGCCATTTTCGAGTTGTTGGGAGGAATAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGTCCAGGATGAGGCTCTaGTTTTTGAGCTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: STCRTWQTIITYYLCPAGSRMRL*FLSLER
Trigger: CCTTTCCAAGCTCAAAAACAAGAGCCTCATCCTGGA...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATTTTCTAAACATCCCTTaGGAGGAAGACTGCTCATTC +
Preference number: 5 (lower is better)
Translates to: PTLPVRQDETFLLYPVENFLNIP*EEDCSF
Trigger: GAATGAGCAGTCTTCCTCCAAAGGGATGTTTAGAAA...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTTCAGCAGCTCGTGCTaGAGCAAAAGTAGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTFSSSC*SKSRSS
Trigger: ACTGCTTCTACTTTTGCTCAAGCACGAGCTGCTGAA...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGGAAGGCGTTTGACGTaGTGGCTCATGGCTCTTCGT +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPGRRLT*WLMALR
Trigger: ACGAAGAGCCATGAGCCACAACGTCAAACGCCTTCC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATATTTCTTGGGATGGTGTaGGAAGTGGGTCAGCGATGC +
Preference number: 5 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIFLGMV*EVGQRC
Trigger: GCATCGCTGACCCACTTCCAACACCATCCCAAGAAA...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATCAGAAGCAGCTTTTATaGCTTCAGTTAGGATGGAGT +
Preference number: 5 (lower is better)
Translates to: PTLPVRQDETFLLYPVENQKQLL*LQLGWS
Trigger: ACTCCATCCTAACTGAAGCAATAAAAGCTGCTTCTG...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGGGATTGGGCAAAGCTTaGGACTTCTTTTGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: STCRTWQTIITYYLCPAGGLGKA*DFFWGK
Trigger: TTTGCCCCAAAAGAAGTCCAAAGCTTTGCCCAATCC...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AAACTGTGCCTGCCTGAAAACAGGCAGAAATCAGTTGTCCATGATTTCTCTCTTGGATTGGGCAAAGCTTaGGACTTCTTTTGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: KLCLPENRQKSVVHDFSLGLGKA*DFFWGK
Trigger: TTTGCCCCAAAAGAAGTCCAAAGCTTTGCCCAATCC...AAGAGAGAAATCATGGACAACTGATTTCTGCCTGTTTTCAGGCAGGCACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp AAGATGAGACCTTCCTTTTATACCCTGTTGAGAATCTCAGGTGGACAACGTGACTGGCATTTTTCTGGATaGGGCAAAGCTTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: KMRPSFYTLLRISGGQRDWHFSG*GKALDF
Trigger: GAAGTCCAAAGCTTTGCCCAATCCAGAAAAATGCCA...GTCACGTTGTCCACCTGAGATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCGTAGTTGGGCCGTTTaGCAGGAGGGCGTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPRSWAV*QEGVFC
Trigger: ACAAAAGACGCCCTCCTGCAAAACGGCCCAACTACG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCAGGCCCTGCCGATTCTaGACACCCTGCATCCATTAC +
Preference number: 5 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCRPCRF*TPCIHY
Trigger: GTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCCT...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTAGGCCCTGCCGATTCTaGACACCCTGCATCCATTAC +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPRPCRF*TPCIHY
Trigger: GTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCCT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTTGGAGGAAGTCCTCCTaGGCTGGGACACAGATCATG +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPWRKSS*AGTQIM
Trigger: CATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCCA...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGCTCGAAAATGGCTTCTaGTCTGCAATGAAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTLENGF*SAMKGN
Trigger: GTTTCCCTTCATTGCAGACAAGAAGCCATTTTCGAG...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGGCAGGAGGGCGTCTTTaGTACTTTTCAAGAAGATTC +
Preference number: 5 (lower is better)
Translates to: STCRTWQTIITYYLCPAGAGGRL*YFSRRF
Trigger: GAATCTTCTTGAAAAGTACAAAAGACGCCCTCCTGC...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGTCAGTCTCATCTGGGTaGGATCCAAAGACATTCAGA +
Preference number: 5 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTSVSSG*DPKTFR
Trigger: TCTGAATGTCTTTGGATCCAACCCAGATGAGACTGA...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS GCA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATaGCCTGCTGGGATACAAGCACGCATTCACACCTCAATAGCAATC +
Preference number: 5 (lower is better)
Translates to: FSTCRTWQTIITYYL*PAGIQARIHTSIAI
Trigger: GATTGCTATTGAGGTGTGAATGCGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAGAGGACAGAGTCACATaGGTAGGCTGGTTTCTCATT +
Preference number: 5 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIEDRVT*VGWFLI
Trigger: AATGAGAAACCAGCCTACCAATGTGACTCTGTCCTC...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp CCCACTCTTCCTGTGAGGCAAGATGAGACCTTCCTTTTATACCCTGTTGAGAATAACTTTCTCATTATCTaGGCATTTTTCTGGATTGGG +
Preference number: 5 (lower is better)
Translates to: PTLPVRQDETFLLYPVENNFLII*AFFWIG
Trigger: CCCAATCCAGAAAAATGCCAAGATAATGAGAAAGTT...ATTCTCAACAGGGTATAAAAGGAAGGTCTCATCTTGCCTCACAGGAAGAGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGAAGAAGATTCTTAGCTaGCTCTTCCGCAAACAGCAT +
Preference number: 5 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTKKILS*LFRKQH
Trigger: ATGCTGTTTGCGGAAGAGCAAGCTAAGAATCTTCTT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCGTAAGCCTGGACTCTaGACTCCCAGTCTTGAGTTA +
Preference number: 5 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCRKPGL*TPSLEL
Trigger: TAACTCAAGACTGGGAGTCAAGAGTCCAGGCTTACG...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGTCTTTAAGGCTTGAGTaGTTCGGCATGGAAATCACA +
Preference number: 5 (lower is better)
Translates to: STCRTWQTIITYYLCPAGSLRLE*FGMEIT
Trigger: TGTGATTTCCATGCCGAACAACTCAAGCCTTAAAGA...CCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGAGGACAGAGTCACATaGGTAGGCTGGTTTCTCATT +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPEDRVT*VGWFLI
Trigger: AATGAGAAACCAGCCTACCAATGTGACTCTGTCCTC...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTTTCAGCAGCTCGTGCTaGAGCAAAAGTAGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPFSSSC*SKSRSS
Trigger: ACTGCTTCTACTTTTGCTCAAGCACGAGCTGCTGAA...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAACTCGAAAATGGCTTCTaGTCTGCAATGAAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQLENGF*SAMKGN
Trigger: GTTTCCCTTCATTGCAGACAAGAAGCCATTTTCGAG...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAACACTCTCCTTACCATTaGGAGATGAAGCTACAGAAG +
Preference number: 5 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQHSPYH*EMKLQK
Trigger: CTTCTGTAGCTTCATCTCCAAATGGTAAGGAGAGTG...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCGCCAAGCGTCTTCTCTaGTCTTCTGCTATAACAGTG +
Preference number: 5 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCAKRLL*SSAITV
Trigger: CACTGTTATAGCAGAAGACAAGAGAAGACGCTTGGC...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTCTCTTGTTTTTGAGCTaGGAAAGGTTTTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: FSTCRTWQTIITYYLCPALLFLS*ERFFTS
Trigger: GGAGGTGAAAAACCTTTCCAAGCTCAAAAACAAGAG...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAATTTCTAAACATCCCTTaGGAGGAAGACTGCTCATTC +
Preference number: 5 (lower is better)
Translates to: CRTWQTIITYYLCPAGIQFLNIP*EEDCSF
Trigger: GAATGAGCAGTCTTCCTCCAAAGGGATGTTTAGAAA...TTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAGCTTTGGACTTCTTTaGGGGCAAATTTATTCGAGG +
Preference number: 5 (lower is better)
Translates to: FSTCRTWQTIITYYLCPASFGLL*GQIYSR
Trigger: CCTCGAATAAATTTGCCCCAAAAGAAGTCCAAAGCT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTAGCTTTGGACTTCTTTaGGGGCAAATTTATTCGAGG +
Preference number: 5 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSSFGLL*GQIYSR
Trigger: CCTCGAATAAATTTGCCCCAAAAGAAGTCCAAAGCT...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTTGGCATTTTTCTGGATaGGGCAAAGCTTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPWHFSG*GKALDF
Trigger: GAAGTCCAAAGCTTTGCCCAATCCAGAAAAATGCCA...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATACAAGCACGACTCTTACAGATATCTaGGTTCCAGATAAAGCTATG +
Preference number: 5 (lower is better)
Translates to: NLADNNNVLSMPCWDTSTTLTDI*VPDKAM
Trigger: CATAGCTTTATCTGGAACCAAGATATCTGTAAGAGT...CGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAAGAAGATTCTTAGCTaGCTCTTCCGCAAACAGCAT +
Preference number: 5 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAKKILS*LFRKQH
Trigger: ATGCTGTTTGCGGAAGAGCAAGCTAAGAATCTTCTT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCACTCTCCTTACCATTaGGAGATGAAGCTACAGAAG +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPHSPYH*EMKLQK
Trigger: CTTCTGTAGCTTCATCTCCAAATGGTAAGGAGAGTG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 90 bp CTATGTTACACATTCCAGAAAGCGCCTTTAGTATTTCTTCCTCTTTaGCTTTCAACTCCAAACAACAGTAATAGGATAAATCCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: LCYTFQKAPLVFLPL*LSTPNNSNRINPAG
Trigger: TCCTGCAGGATTTATCCTATTACTGTTGTTTGGAGTTGAAAGGCAAAGAGGAAGAAATACTAAAGGCGCTTTCTGGAATGTGTAACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTCTCTTGTTTTTGAGCTaGGAAAGGTTTTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPLLFLS*ERFFTS
Trigger: GGAGGTGAAAAACCTTTCCAAGCTCAAAAACAAGAG...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCAGAAGCAGCTTTTATaGCTTCAGTTAGGATGGAGT +
Preference number: 5 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCQKQLL*LQLGWS
Trigger: ACTCCATCCTAACTGAAGCAATAAAAGCTGCTTCTG...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp ATACACTATCATTTCCTTCCTAGAGATCCGCAATGCACATTATCACATGGAAGTTGCTCCTCTATGGCTTaGAGAAAATCTTTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: IHYHFLPRDPQCTLSHGSCSSMA*RKSLQK
Trigger: TTTCTGCAAAGATTTTCTCAAAGCCATAGAGGAGCA...ACTTCCATGTGATAATGTGCATTGCGGATCTCTAGGAAGGAAATGATAGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401707.7
CDS-3UTR CAA 90 bp AGCAGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCATGAGGCTCTTGTTTTaGAGCTTGGAAAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SRFSTCRTWQTIITYYLCMRLLF*SLERFF
Trigger: GAAAAACCTTTCCAAGCTCAAAAACAAGAGCCTCAT...GCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp ACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTGGGATAAAAAGTATAGGTATCTaGGATTCATGGGGACCTAAA +
Preference number: 5 (lower is better)
Translates to: TCRTWQTIITYYLCPAGIKSIGI*DSWGPK
Trigger: TTTAGGTCCCCATGAATCCAAGATACCTATACTTTT...TATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp TTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTGCTAAAAGTATAGGTATCTaGGATTCATGGGGACCTAAA +
Preference number: 5 (lower is better)
Translates to: FSTCRTWQTIITYYLCPAKSIGI*DSWGPK
Trigger: TTTAGGTCCCCATGAATCCAAGATACCTATACTTTT...AGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTAACTTTCTCATTATCTaGGCATTTTTCTGGATTGGG +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPNFLII*AFFWIG
Trigger: CCCAATCCAGAAAAATGCCAAGATAATGAGAAAGTT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS-3UTR CAA 90 bp AGATTCTCCACATGTAGAACTTGGCAGACAATAATAACGTATTATCTATGCCCTACTCTTACAGATATCTaGGTTCCAGATAAAGCTATG +
Preference number: 5 (lower is better)
Translates to: RFSTCRTWQTIITYYLCPTLTDI*VPDKAM
Trigger: CATAGCTTTATCTGGAACCAAGATATCTGTAAGAGT...AGGGCATAGATAATACGTTATTATTGTCTGCCAAGTTCTACATGTGGAGAATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 72 bp ACAGGCAAGCCTCTCTGGTCAATCCTTGCTGGCCTCTaGCGGGAGCTCGCCGGCCTCCCCGACTATCCTCAG +
Preference number: 6 (lower is better)
Translates to: TGKPLWSILAGL*RELAGLPDYPQ
Trigger: CTGAGGATAGTCGGGGAGGCCGGCGAGCTCCCGGCAGAGGCCAGCAAGGATTGACCAGAGAGGCTTGCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 72 bp AGGAAGTCCTCCTTGGCTGGGACACAGATCATGGTGTaGGGCTCGGGGCTGCCCTTGCTGAGCAGGGACAGG +
Preference number: 6 (lower is better)
Translates to: RKSSLAGTQIMV*GSGLPLLSRDR
Trigger: CCTGTCCCTGCTCAGCAAGGGCAGCCCCGAGCCTCACACCATGATCTGTGTCCCAGCCAAGGAGGACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 72 bp CCAGTCCTCATGGAGCTGGAGGAAGTCCTCCTTGGCTaGGACACAGATCATGGTGTGAGGCTCGGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: PVLMELEEVLLG*DTDHGVRLGAA
Trigger: GGCAGCCCCGAGCCTCACACCATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCCAGCTCCATGAGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 72 bp CGGGAGCTCGCCGGCCTCCCCGACTATCCTCAGAACTaGGCCCACACCAGGCTGACAGTTGCTTCAGTAATT +
Preference number: 6 (lower is better)
Translates to: RELAGLPDYPQN*AHTRLTVASVI
Trigger: AATTACTGAAGCAACTGTCAGCCTGGTGTGGGCCCAGTTCTGAGGATAGTCGGGGAGGCCGGCGAGCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 90 bp TTCACTGGCCTCCTGGTCTGTGATCCTCTCAGGCCCTGCCGATTCTaGACACCCTGCATCCATTACCTCCTCTGCCTCCCTGGGGTGCTC +
Preference number: 6 (lower is better)
Translates to: FTGLLVCDPLRPCRF*TPCIHYLLCLPGVL
Trigger: GAGCACCCCAGGGAGGCAGAGGAGGTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCCTGAGAGGATCACAGACCAGGAGGCCAGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS CCA 72 bp AATGCCAGTCCTCATGGAGCTGGAGGAAGTCCTCCTTaGCTGGGACACAGATCATGGTGTGAGGCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: NASPHGAGGSPP*LGHRSWCEARG
Trigger: GCCCCGAGCCTCACACCATGATCTGTGTCCCAGCCAAGGAGGACTTCCTCCAGCTCCATGAGGACTGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 90 bp TCCGCCTCTTTCTGGGCAATCTCCTGTAACCGTCTGGGAAGGCGTTaGACGTTGTGGCTCATGGCTCTTCGTCGCATGTGCCGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: SASFWAISCNRLGRR*TLWLMALRRMCRGR
Trigger: TCTGCCACGGCACATGCGACGAAGAGCCATGAGCCACAACGTCAAACGCCTTCCCAGACGGTTACAGGAGATTGCCCAGAAAGAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000522319.5
CDS CAA 72 bp GCAATCTCCTGTAACCGTCTGGGAAGGCGTTTGACGTaGTGGCTCATGGCTCTTCGTCGCATGTGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: AISCNRLGRRLT*WLMALRRMCRG
Trigger: GCCACGGCACATGCGACGAAGAGCCATGAGCCACAACGTCAAACGCCTTCCCAGACGGTTACAGGAGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000522319.5
CDS TCA 72 bp TCTGGGCAATCTCCTGTAACCGTCTGGGAAGGCGTTTaGCGTTGTGGCTCATGGCTCTTCGTCGCATGTGCC +
Preference number: 6 (lower is better)
Translates to: SGQSPVTVWEGV*RCGSWLFVACA
Trigger: GGCACATGCGACGAAGAGCCATGAGCCACAACGTCAAACGCCTTCCCAGACGGTTACAGGAGATTGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000522319.5
CDS GCA 72 bp TGCCGATTCTTGACACCCTGCATCCATTACCTCCTCTaGCTCCCTGGGGTGCTCTATGGATGTGCCCACTTC +
Preference number: 6 (lower is better)
Translates to: CRFLTPCIHYLL*LPGVLYGCAHF
Trigger: GAAGTGGGCACATCCATAGAGCACCCCAGGGAGGCAGAGGAGGTAATGGATGCAGGGTGTCAAGAATCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS CCA 72 bp ATCTCCTGTAACCGTCTGGGAAGGCGTTTGACGTTGTaGCTCATGGCTCTTCGTCGCATGTGCCGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: ISCNRLGRRLTL*LMALRRMCRGR
Trigger: TCTGCCACGGCACATGCGACGAAGAGCCATGAGCCACAACGTCAAACGCCTTCCCAGACGGTTACAGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000522319.5
CDS CCA 72 bp AGCTGCCTGCTCTCAGAAGGGTCACCCGGGGTCCTCTaGGACTTCCAGATAAACGTAACAGGCCCAAGCATT +
Preference number: 6 (lower is better)
Translates to: SCLLSEGSPGVL*DFQINVTGPSI
Trigger: AATGCTTGGGCCTGTTACGTTTATCTGGAAGTCCCAGAGGACCCCGGGTGACCCTTCTGAGAGCAGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 72 bp TTCTGGGCAATCTCCTGTAACCGTCTGGGAAGGCGTTaGACGTTGTGGCTCATGGCTCTTCGTCGCATGTGC +
Preference number: 6 (lower is better)
Translates to: FWAISCNRLGRR*TLWLMALRRMC
Trigger: GCACATGCGACGAAGAGCCATGAGCCACAACGTCAAACGCCTTCCCAGACGGTTACAGGAGATTGCCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000522319.5
CDS TCA 72 bp GGATGGTGTTGGAAGTGGGTCAGCGATGCAGACAGCTaGTTTGATGGGTTCCACACACTGGCACGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: GWCWKWVSDADS*FDGFHTLARCF
Trigger: AAAGCAGCGTGCCAGTGTGTGGAACCCATCAAATCAGCTGTCTGCATCGCTGACCCACTTCCAACACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 72 bp TTGCTCTTCCGCAAACAGCATCCCGGCAGGGCAGTCTaGAAAATCGCCTGGGACATTAGGCGACCTCTTATA +
Preference number: 6 (lower is better)
Translates to: LLFRKQHPGRAV*KIAWDIRRPLI
Trigger: TATAAGAGGTCGCCTAATGTCCCAGGCGATTTTCCAGACTGCCCTGCCGGGATGCTGTTTGCGGAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 72 bp GCTTCTCCACAGCCAACAGCCATGGAAAAATCTCCCTaGGTCACAAAGCCTAGGAGAGTTCTGGAGCAGTGC +
Preference number: 6 (lower is better)
Translates to: ASPQPTAMEKSP*VTKPRRVLEQC
Trigger: GCACTGCTCCAGAACTCTCCTAGGCTTTGTGACTCAGGGAGATTTTTCCATGGCTGTTGGCTGTGGAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 72 bp GCTCCCTTGGCGCTTTCCAGACAAGCAGTGAACTGCTaGAAACGTCAGCCCTGTGTCTATGTTACACATTCC +
Preference number: 6 (lower is better)
Translates to: APLALSRQAVNC*KRQPCVYVTHS
Trigger: GGAATGTGTAACATAGACACAGGGCTGACGTTTGCAGCAGTTCACTGCTTGTCTGGAAAGCGCCAAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 72 bp AAACAGCATCCCGGCAGGGCAGTCTGGAAAATCGCCTaGGACATTAGGCGACCTCTTATACTGAGAATGCAC +
Preference number: 6 (lower is better)
Translates to: KQHPGRAVWKIA*DIRRPLILRMH
Trigger: GTGCATTCTCAGTATAAGAGGTCGCCTAATGTCCCAGGCGATTTTCCAGACTGCCCTGCCGGGATGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 72 bp CATCCATTACCTCCTCTGCCTCCCTGGGGTGCTCTATaGATGTGCCCACTTCATCAGATGGCTGATGAGTTT +
Preference number: 6 (lower is better)
Translates to: HPLPPLPPWGAL*MCPLHQMADEF
Trigger: AAACTCATCAGCCATCTGATGAAGTGGGCACATCCATAGAGCACCCCAGGGAGGCAGAGGAGGTAATGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS GCA 72 bp AAGGCTCCCTTGGCGCTTTCCAGACAAGCAGTGAACTaGTGCAAACGTCAGCCCTGTGTCTATGTTACACAT +
Preference number: 6 (lower is better)
Translates to: KAPLALSRQAVN*CKRQPCVYVTH
Trigger: ATGTGTAACATAGACACAGGGCTGACGTTTGCAGCAGTTCACTGCTTGTCTGGAAAGCGCCAAGGGAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 72 bp TGGGACATTAGGCGACCTCTTATACTGAGAATGCACTaGAGACTCTTTCAACCCTCCGACTCTCACACCTCG +
Preference number: 6 (lower is better)
Translates to: WDIRRPLILRMH*RLFQPSDSHTS
Trigger: CGAGGTGTGAGAGTCGGAGGGTTGAAAGAGTCTGCAGTGCATTCTCAGTATAAGAGGTCGCCTAATGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 72 bp CTATCCTCAGAACTGGGCCCACACCAGGCTGACAGTTaGTTCAGTAATTTTCTACTCCTGAGAACGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LSSELGPHQADS*FSNFLLLRTQR
Trigger: CCTCTGCGTTCTCAGGAGTAGAAAATTACTGAAGCAACTGTCAGCCTGGTGTGGGCCCAGTTCTGAGGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 90 bp CATTTCTCTGGGATATTTATTCACCCGATAAAGCACAAGGCTCCCTaGGCGCTTTCCAGACAAGCAGTGAACTGCTGCAAACGTCAGCCC +
Preference number: 6 (lower is better)
Translates to: HFSGIFIHPIKHKAP*ALSRQAVNCCKRQP
Trigger: GGGCTGACGTTTGCAGCAGTTCACTGCTTGTCTGGAAAGCGCCAAGGGAGCCTTGTGCTTTATCGGGTGAATAAATATCCCAGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 90 bp TCTTGGGATGGTGTTGGAAGTGGGTCAGCGATGCAGACAGCTGATTaGATGGGTTCCACACACTGGCACGCTGCTTTTATTTCCTCTAAG +
Preference number: 6 (lower is better)
Translates to: SWDGVGSGSAMQTAD*MGSTHWHAAFISSK
Trigger: CTTAGAGGAAATAAAAGCAGCGTGCCAGTGTGTGGAACCCATCAAATCAGCTGTCTGCATCGCTGACCCACTTCCAACACCATCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 72 bp GTGTTGGAAGTGGGTCAGCGATGCAGACAGCTGATTTaGTGGGTTCCACACACTGGCACGCTGCTTTTATTT +
Preference number: 6 (lower is better)
Translates to: VLEVGQRCRQLI*WVPHTGTLLLF
Trigger: AAATAAAAGCAGCGTGCCAGTGTGTGGAACCCATCAAATCAGCTGTCTGCATCGCTGACCCACTTCCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 72 bp GGAAAATCGCCTGGGACATTAGGCGACCTCTTATACTaGGAATGCACTGCAGACTCTTTCAACCCTCCGACT +
Preference number: 6 (lower is better)
Translates to: GKSPGTLGDLLY*ECTADSFNPPT
Trigger: AGTCGGAGGGTTGAAAGAGTCTGCAGTGCATTCTCAGTATAAGAGGTCGCCTAATGTCCCAGGCGATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 72 bp TGCTTCAGTAATTTTCTACTCCTGAGAACGCAGAGGTaGCTCCCTGTGGCAGCAACATGGTTTTCACTGGCC +
Preference number: 6 (lower is better)
Translates to: CFSNFLLLRTQR*LPVAATWFSLA
Trigger: GGCCAGTGAAAACCATGTTGCTGCCACAGGGAGTCACCTCTGCGTTCTCAGGAGTAGAAAATTACTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS GCA 72 bp GGGCGTCTTTTGTACTTTTCAAGAAGATTCTTAGCTTaGTCTTCCGCAAACAGCATCCCGGCAGGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: GRLLYFSRRFLA*SSANSIPAGQS
Trigger: AGACTGCCCTGCCGGGATGCTGTTTGCGGAAGAGCAAGCTAAGAATCTTCTTGAAAAGTACAAAAGACGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 72 bp AGGGCGTCTTTTGTACTTTTCAAGAAGATTCTTAGCTaGCTCTTCCGCAAACAGCATCCCGGCAGGGCAGTC +
Preference number: 6 (lower is better)
Translates to: RASFVLFKKILS*LFRKQHPGRAV
Trigger: GACTGCCCTGCCGGGATGCTGTTTGCGGAAGAGCAAGCTAAGAATCTTCTTGAAAAGTACAAAAGACGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 72 bp ATGAAGCTACAGAAGGTTCTTCGTAAGCCTGGACTCTaGACTCCCAGTCTTGAGTTAACTGCTCCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: MKLQKVLRKPGL*TPSLELTAPRD
Trigger: GTCCCTGGGAGCAGTTAACTCAAGACTGGGAGTCAAGAGTCCAGGCTTACGAAGAACCTTCTGTAGCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS CAA 90 bp CATTTGGAGATGAAGCTACAGAAGGTTCTTCGTAAGCCTGGACTCTaGACTCCCAGTCTTGAGTTAACTGCTCCCAGGGACAGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: HLEMKLQKVLRKPGL*TPSLELTAPRDSRK
Trigger: CTTTCTGCTGTCCCTGGGAGCAGTTAACTCAAGACTGGGAGTCAAGAGTCCAGGCTTACGAAGAACCTTCTGTAGCTTCATCTCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS GCA 72 bp TGCCAGAGTGCCAAGCTTAACGTAGTTGGGCCGTTTTaGAGGAGGGCGTCTAAAGAAAAACATACAGGAGAA +
Preference number: 6 (lower is better)
Translates to: CQSAKLNVVGPF*RRASKEKHTGE
Trigger: TTCTCCTGTATGTTTTTCTTTAGACGCCCTCCTGCAAAACGGCCCAACTACGTTAAGCTTGGCACTCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517435.1
CDS CCA 72 bp TGTGGACAGAAGCAGCTTTTATTGCTTCAGTTAGGATaGAGTGGGAAAGTGGCCCAATCAGCCGGAATCTGT +
Preference number: 6 (lower is better)
Translates to: CGQKQLLLLQLG*SGKVAQSAGIC
Trigger: ACAGATTCCGGCTGATTGGGCCACTTTCCCACTCCATCCTAACTGAAGCAATAAAAGCTGCTTCTGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 72 bp GGGATATTTATTCACCCGATAAAGCACAAGGCTCCCTaGGCGCTTTCCAGACAAGCAGTGAACTGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: GIFIHPIKHKAP*ALSRQAVNCCK
Trigger: TTTGCAGCAGTTCACTGCTTGTCTGGAAAGCGCCAAGGGAGCCTTGTGCTTTATCGGGTGAATAAATATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 90 bp GAGCACAAGGCACCTCAGATCTTCTTAGGTCACTCTCCTTACCATTaGGAGATGAAGCTACAGAAGGTTCTTCGTAAGCCTGGACTCTTG +
Preference number: 6 (lower is better)
Translates to: EHKAPQIFLGHSPYH*EMKLQKVLRKPGLL
Trigger: CAAGAGTCCAGGCTTACGAAGAACCTTCTGTAGCTTCATCTCCAAATGGTAAGGAGAGTGACCTAAGAAGATCTGAGGTGCCTTGTGCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349693.3
ENST00000401707.7
ENST00000517435.1
CDS GCA 72 bp ACACTCTTACAGATATCTTGGTTCCAGATAAAGCTATaGGTACATTCCACAGGCACACCCTCCAGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: TLLQISWFQIKL*VHSTGTPSRSS
Trigger: GCTGCTTCTGGAGGGTGTGCCTGTGGAATGTACGCATAGCTTTATCTGGAACCAAGATATCTGTAAGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS TCA 72 bp CCTCCCAACAACTCGAAAATGGCTTCTTGTCTGCAATaGAGGGAAACGCTGTCAGGTTTCTTACAGGTTTCT +
Preference number: 6 (lower is better)
Translates to: PPNNSKMASCLQ*RETLSGFLQVS
Trigger: AGAAACCTGTAAGAAACCTGACAGCGTTTCCCTTCATTGCAGACAAGAAGCCATTTTCGAGTTGTTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 72 bp TTATTCCTCCCAACAACTCGAAAATGGCTTCTTGTCTaGAATGAAGGGAAACGCTGTCAGGTTTCTTACAGG +
Preference number: 6 (lower is better)
Translates to: LFLPTTRKWLLV*NEGKRCQVSYR
Trigger: CCTGTAAGAAACCTGACAGCGTTTCCCTTCATTGCAGACAAGAAGCCATTTTCGAGTTGTTGGGAGGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 90 bp ATCCTGATCCGAGATTTTATTCTCTGTGACACTCTTACAGATATCTaGGTTCCAGATAAAGCTATGCGTACATTCCACAGGCACACCCTC +
Preference number: 6 (lower is better)
Translates to: ILIRDFILCDTLTDI*VPDKAMRTFHRHTL
Trigger: GAGGGTGTGCCTGTGGAATGTACGCATAGCTTTATCTGGAACCAAGATATCTGTAAGAGTGTCACAGAGAATAAAATCTCGGATCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS GCA 72 bp AACTTGGCAGACAATAATAACGTATTATCTATGCCCTaGTGGGATACAAGCACGCATTCACACCTCAATAGC +
Preference number: 6 (lower is better)
Translates to: NLADNNNVLSMP*WDTSTHSHLNS
Trigger: GCTATTGAGGTGTGAATGCGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CCA 72 bp TTGGCAGACAATAATAACGTATTATCTATGCCCTGCTaGGATACAAGCACGCATTCACACCTCAATAGCAAT +
Preference number: 6 (lower is better)
Translates to: LADNNNVLSMPC*DTSTHSHLNSN
Trigger: ATTGCTATTGAGGTGTGAATGCGTGCTTGTATCCCAGCAGGGCATAGATAATACGTTATTATTGTCTGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7
CDS CAA 72 bp CGAGATTTTATTCTCTGTGACACTCTTACAGATATCTaGGTTCCAGATAAAGCTATGCGTACATTCCACAGG +
Preference number: 6 (lower is better)
Translates to: RDFILCDTLTDI*VPDKAMRTFHR
Trigger: CCTGTGGAATGTACGCATAGCTTTATCTGGAACCAAGATATCTGTAAGAGTGTCACAGAGAATAAAATCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349693.3
ENST00000401707.7