RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PON2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105854

Ensembl transcript IDs: ENST00000222572.8, ENST00000433091.6, ENST00000446142.5, ENST00000455123.5, ENST00000459842.1, ENST00000460873.5, ENST00000471883.1, ENST00000478801.5, ENST00000483292.5, ENST00000490778.5, ENST00000491069.5, ENST00000493290.5, ENST00000493469.5, ENST00000632034.1, ENST00000633192.1, ENST00000633531.1

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGGATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCCCCCGAGGAAGGATCAATAGATAAA +
Preference number: 1 (lower is better)
Translates to: GGLFGSYTKSFWPLG*QPTQMSPEEGSIDK
Trigger: TTTATCTATTGATCCTTCCTCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAATCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
3UTR CCA 90 bp AGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGACCTGTTCTGCAGCCCTCATCAAAT +
Preference number: 1 (lower is better)
Translates to: RSIISIPPGLSGAKL*SPGNFRPVLQPSSN
Trigger: ATTTGATGAGGGCTGCAGAACAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR TCA 90 bp CTCTATTTCAGTGGAATCCATGTTCTGGCAGTTGGAAGGCAAAGGTaGGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAG +
Preference number: 1 (lower is better)
Translates to: LYFSGIHVLAVGRQR*GLLCAKCIHFIRKQ
Trigger: CTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTTGCCTTCCAACTGCCAGAACATGGATTCCACTGAAATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR GCA 90 bp AGAACTAAAAGGGCCGTTCCTTACTGGAATAAAATTAACTACACATaGCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGA +
Preference number: 1 (lower is better)
Translates to: RTKRAVPYWNKINYT*HTFLGQCCWLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCTTTTAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR TCA 90 bp AAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTGAGGCTGATGCGGAGAACCTCTaGCGAGGGAGGATTGTTCGG +
Preference number: 2 (lower is better)
Translates to: KALWYKVPMSSFPSYTEADAENL*RGRIVR
Trigger: CCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATC...AGCCTCAGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
3UTR-3UTR GCA 90 bp GAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGAGGAAGGATTTTAGACCTGTTCTaGAGCCCTCATCAAATACCC +
Preference number: 2 (lower is better)
Translates to: EELLAIRMTAYPDVPRGRILDLF*SPHQIP
Trigger: GGGTATTTGATGAGGGCTGCAGAACAGGTCTAAAAT...CCTTCCTCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR TCA 90 bp GTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCTTGTATCTCCTCTGCTaGATTTGGGGAAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: VIHEELLAIRMTAYPDVPLYLLC*IWGRKK
Trigger: CTTCTTCCTTCCCCAAATTCAGCAGAGGAGATACAA...GGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR TCA 90 bp AAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTGAGGCTTTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCC +
Preference number: 2 (lower is better)
Translates to: KALWYKVPMSSFPSYTEAFWPLG*QPTQMS
Trigger: GGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAA...AGCCTCAGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
3UTR-3UTR GCA 90 bp AGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGTCCAGGCTTATCTGGTaGAAAGCTGTGGAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: SFPSYTEATELPWRTDPLSRLIW*KAVESW
Trigger: CCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGA...CAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR CCA 90 bp AGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGTCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: SFPSYTEATELPWRTDPLSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...CAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR TCA 90 bp AGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGAATCAAACCCACGACTaGTTCTTAATTCCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: SFPSYTEATELPWRTDPLNQTHD*FLIPVP
Trigger: GGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATT...CAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR CCA 90 bp CCTATGAGCAGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACATCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 2 (lower is better)
Translates to: PMSSFPSYTEATELPWRTSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...TGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCTGCTCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR CCA 90 bp AAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTGAGGCTTCAGATAGAATGTTCTaGATGCGGAGAACCTCTGAC +
Preference number: 2 (lower is better)
Translates to: KALWYKVPMSSFPSYTEASDRMF*MRRTSD
Trigger: GTCAGAGGTTCTCCGCATCCAGAACATTCTATCTGA...AGCCTCAGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
3UTR-3UTR CCA 90 bp AGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGCTGGGTCAATGTTGCTaGTTAAATTCCCTCAGAATT +
Preference number: 2 (lower is better)
Translates to: SFPSYTEATELPWRTDPLLGQCC*LNSLRI
Trigger: AATTCTGAGGGAATTTAACCAGCAACATTGACCCAG...CAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455123.5
3UTR-3UTR CCA 90 bp ATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCATGTATTCTTGAATTCTaGGTGGTTTACAACAAAGAG +
Preference number: 2 (lower is better)
Translates to: IVRVIHEELLAIRMTAYPCILEF*VVYNKE
Trigger: CTCTTTGTTGTAAACCACCCAGAATTCAAGAATACA...TGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR GCA 90 bp CAATACAAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTTTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: QYKALWYKVPMSSFPSYTFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...AGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455123.5
3UTR-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCGTGGAATCCATGTTCTaGCAGTTGGAAGGCAAAGGT +
Preference number: 2 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAVESMF*QLEGKG
Trigger: ACCTTTGCCTTCCAACTGCCAGAACATGGATTCCAC...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTGGAATCCATGTTCTaGCAGTTGGAAGGCAAAGGT +
Preference number: 2 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNVESMF*QLEGKG
Trigger: ACCTTTGCCTTCCAACTGCCAGAACATGGATTCCAC...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR TCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGGTTGGAAGGCAAAGGTaGGGCTTACTTTGTGCAAAA +
Preference number: 2 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWVGRQR*GLLCAK
Trigger: TTTTGCACAAAGTAAGCCTCACCTTTGCCTTCCAAC...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR TCA 90 bp ACTTTAAGAAAGGATCAGAGAAGTAGTGGTCATTTGTGGCATAGAAATGTGCCGGAAGAAGCTCATGTTTaGCTGTTTTCAGATGCAACA +
Preference number: 2 (lower is better)
Translates to: TLRKDQRSSGHLWHRNVPEEAHV*LFSDAT
Trigger: TGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTC...CGGCACATTTCTATGCCACAAATGACCACTACTTCTCTGATCCTTTCTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR CAA 90 bp GGAAATATAATTCACTCTATTTCAGTGGAATCCATGTTCTGGCAGTaGGAAGGCAAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACT +
Preference number: 2 (lower is better)
Translates to: GNIIHSISVESMFWQ*EGKGEAYFVQNVFT
Trigger: AGTGAATACATTTTGCACAAAGTAAGCCTCACCTTTGCCTTCCAACTGCCAGAACATGGATTCCACTGAAATAGAGTGAATTATATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR GCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGATTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTCTGGGTCAATGTTGCTaGTTAAATTCCCTCAGAATT +
Preference number: 2 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSLGQCC*LNSLRI
Trigger: AATTCTGAGGGAATTTAACCAGCAACATTGACCCAG...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTTTCACTCTATTTCAGTaGAATCCATGTTCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSFTLFQ*NPCSGS
Trigger: ACTGCCAGAACATGGATTCCACTGAAATAGAGTGAA...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGATTCACTCTATTTCAGTaGAATCCATGTTCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARFTLFQ*NPCSGS
Trigger: ACTGCCAGAACATGGATTCCACTGAAATAGAGTGAA...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR GCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGCTGGGTCAATGTTGCTaGTTAAATTCCCTCAGAATT +
Preference number: 2 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWLGQCC*LNSLRI
Trigger: AATTCTGAGGGAATTTAACCAGCAACATTGACCCAG...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTCACTCTATTTCAGTaGAATCCATGTTCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWFTLFQ*NPCSGS
Trigger: ACTGCCAGAACATGGATTCCACTGAAATAGAGTGAA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR GCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTTTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGAGGGCCGTTCCTTACTaGAATAAAATTAACTACACA +
Preference number: 2 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWRAVPY*NKINYT
Trigger: TGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATAGGGCCGTTCCTTACTaGAATAAAATTAACTACACA +
Preference number: 2 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNRAVPY*NKINYT
Trigger: TGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTTTCTGTCCCTTGCTTaGCATTTTAAAGAACCTGTT +
Preference number: 2 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNFLSLA*HFKEPV
Trigger: AACAGGTTCTTTAAAATGCCAAGCAAGGGACAGAAA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTTCTGTCCCTTGCTTaGCATTTTAAAGAACCTGTT +
Preference number: 2 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWFLSLA*HFKEPV
Trigger: AACAGGTTCTTTAAAATGCCAAGCAAGGGACAGAAA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTTTTCTGTCCCTTGCTTaGCATTTTAAAGAACCTGTT +
Preference number: 2 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFFLSLA*HFKEPV
Trigger: AACAGGTTCTTTAAAATGCCAAGCAAGGGACAGAAA...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR TCA 72 bp TTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCCCCCGAGGAAGGATCA +
Preference number: 3 (lower is better)
Translates to: FGSYTKSFWPLG*QPTQMSPEEGS
Trigger: TGATCCTTCCTCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
3UTR CCA 72 bp ATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGACCTGTTCTGCAGCCC +
Preference number: 3 (lower is better)
Translates to: ISIPPGLSGAKL*SPGNFRPVLQP
Trigger: GGGCTGCAGAACAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
3UTR TCA 72 bp GTTCACAATACAAGGCTCTGTGGTATAAAGTGCCTATaGGCAGCTTCCCATCATACACTGAGGCTACAGAAC +
Preference number: 3 (lower is better)
Translates to: VHNTRLCGIKCL*AASHHTLRLQN
Trigger: GTTCTGTAGCCTCAGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTTGTATTGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455123.5
ENST00000483292.5
3UTR-3UTR CAA 90 bp AAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTGAGGCTTCATCAGGTGAAATATaGATCCCATTTGCTGAATCA +
Preference number: 3 (lower is better)
Translates to: KALWYKVPMSSFPSYTEASSGEI*IPFAES
Trigger: TGATTCAGCAAATGGGATCAATATTTCACCTGATGA...AGCCTCAGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR CAA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAATTTCTGGGTCAATGTaGCTGGTTAAATTCCCTCAG +
Preference number: 3 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARISGSM*LVKFPQ
Trigger: CTGAGGGAATTTAACCAGCAACATTGACCCAGAAAT...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR CCA 72 bp AATATAATTCACTCTATTTCAGTGGAATCCATGTTCTaGCAGTTGGAAGGCAAAGGTGAGGCTTACTTTGTG +
Preference number: 3 (lower is better)
Translates to: NIIHSISVESMF*QLEGKGEAYFV
Trigger: CACAAAGTAAGCCTCACCTTTGCCTTCCAACTGCCAGAACATGGATTCCACTGAAATAGAGTGAATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CAA 90 bp ACTTTAAGAAAGGATCAGAGAAGTAGTGGTCATTTGTGGCATAGAAATGTGCCGATTTCCACTGTATTCTaGAATTCTGGGTGGTTTACA +
Preference number: 3 (lower is better)
Translates to: TLRKDQRSSGHLWHRNVPISTVF*NSGWFT
Trigger: TGTAAACCACCCAGAATTCAAGAATACAGTGGAAAT...CGGCACATTTCTATGCCACAAATGACCACTACTTCTCTGATCCTTTCTTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
3UTR-3UTR CAA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGATTTCTTTTCTGTCCCTaGCTTGGCATTTTAAAGAAC +
Preference number: 3 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARFLFCP*LGILKN
Trigger: GTTCTTTAAAATGCCAAGCAAGGGACAGAAAAGAAA...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CAA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCTTTCTTTTCTGTCCCTaGCTTGGCATTTTAAAGAAC +
Preference number: 3 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAFLFCP*LGILKN
Trigger: GTTCTTTAAAATGCCAAGCAAGGGACAGAAAAGAAA...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CAA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGAAGGTGAGGCTTACTTaGTGCAAAATGTATTCACTT +
Preference number: 3 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWKVRLT*CKMYSL
Trigger: AAGTGAATACATTTTGCACAAAGTAAGCCTCACCTT...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR-3UTR CAA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAAGGTGAGGCTTACTTaGTGCAAAATGTATTCACTT +
Preference number: 3 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAKVRLT*CKMYSL
Trigger: AAGTGAATACATTTTGCACAAAGTAAGCCTCACCTT...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp GGATGCGGAGAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGAAGAGCTGATGCGGAGAACCTCTaGCGAGGGAGGATTGTTCGG +
Preference number: 4 (lower is better)
Translates to: GCGEPLTREDCSGHTRRADAENL*RGRIVR
Trigger: CCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATC...AGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR GCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATCCTAGGCCGAGTCCCTaGGTCGGGGCCGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNPRPSP*VGAAEA
Trigger: AGCCTCCGCGGCCCCGACGCAGGGACTCGGCCTAGG...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433091.6
ENST00000633192.1
CDS-3UTR GCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCCTAGGCCGAGTCCCTaGGTCGGGGCCGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGPRPSP*VGAAEA
Trigger: AGCCTCCGCGGCCCCGACGCAGGGACTCGGCCTAGG...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433091.6
ENST00000633192.1
CDS-3UTR CCA 90 bp GAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGAGGAAGGGTGGAATCCATGTTCTaGCAGTTGGAAGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: EELLAIRMTAYPDVPRGRVESMF*QLEGKG
Trigger: ACCTTTGCCTTCCAACTGCCAGAACATGGATTCCAC...CCTTCCTCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455123.5
CDS-3UTR CCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTATCTTCCCGGCTCGATaGTGCCGGCCGCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGIFPAR*CRPRSA
Trigger: GGCGGAGCGCGGCCGGCACCATCGAGCCGGGAAGAT...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCATCTTCCCGGCTCGATaGTGCCGGCCGCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISIFPAR*CRPRSA
Trigger: GGCGGAGCGCGGCCGGCACCATCGAGCCGGGAAGAT...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp GAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATCCGGTCCAACAGCTGTaGTGTCATTCACACTTGGAA +
Preference number: 4 (lower is better)
Translates to: EPLTREDCSGHTRRASGHPVQQL*CHSHLE
Trigger: TTCCAAGTGTGAATGACATCACAGCTGTTGGACCGG...ATGGCCAGAAGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp ATGTTCTGGATGCGGAGAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGCCGGTCCAACAGCTGTaGTGTCATTCACACTTGGAA +
Preference number: 4 (lower is better)
Translates to: MFWMRRTSDEGGLFGSYTPVQQL*CHSHLE
Trigger: TTCCAAGTGTGAATGACATCACAGCTGTTGGACCGG...CGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATCCAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCTGGCCAGCAGCTCCGTaGGCGGTGCCATCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISWPAAP*AVPSSR
Trigger: CCGGGAAGATGGCACCGCCCACGGAGCTGCTGGCCA...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTGCCTCGCTCCGGCCTaGCCAGCAGCTCCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWCLAPA*PAAPWA
Trigger: CGCCCACGGAGCTGCTGGCCAGGCCGGAGCGAGGCA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTGCCTCGCTCCGGCCTaGCCAGCAGCTCCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNCLAPA*PAAPWA
Trigger: CGCCCACGGAGCTGCTGGCCAGGCCGGAGCGAGGCA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp GAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGAGGAAGGATCTCAGATAGAATGTTCTaGATGCGGAGAACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: ELLAIRMTAYPDVPRGRISDRMF*MRRTSD
Trigger: GTCAGAGGTTCTCCGCATCCAGAACATTCTATCTGA...GATCCTTCCTCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAATCTTCCCGGCTCGATaGTGCCGGCCGCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARIFPAR*CRPRSA
Trigger: GGCGGAGCGCGGCCGGCACCATCGAGCCGGGAAGAT...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp GTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATCCGGTCCAACAGCTGTaGTGTCATTCACACTTGGAA +
Preference number: 4 (lower is better)
Translates to: VRVIHEELLAIRMTAYPDPVQQL*CHSHLE
Trigger: TTCCAAGTGTGAATGACATCACAGCTGTTGGACCGG...ATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp AGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGATGCGGAGAACCTCTaGCGAGGGAGGATTGTTCGG +
Preference number: 4 (lower is better)
Translates to: RSIISIPPGLSGAKLWSPDAENL*RGRIVR
Trigger: CCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATC...AGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR TCA 90 bp ATGTTCTGGATGCGGAGAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGCTTCCCATCATACACTaGGGCTACAGAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: MFWMRRTSDEGGLFGSYTLPIIH*GYRTSL
Trigger: CAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAG...CGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATCCAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp ATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGACTTCCCATCATACACTaGGGCTACAGAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: IHEELLAIRMTAYPDVPRLPIIH*GYRTSL
Trigger: CAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAG...TCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR GCA 90 bp CAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGACCTGTTCTGCAAGTCGATTTCTGAGTaGCAGAAGCCTCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: QAYLVQSCGVLGILDLFCKSISE*QKPLAQ
Trigger: CTGGGCGAGAGGCTTCTGGCACTCAGAAATCGACTT...GCAGAACAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR GCA 90 bp ATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCATCCAGGCTTATCTGGTaGAAAGCTGTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IVRVIHEELLAIRMTAYPSRLIW*KAVESW
Trigger: CCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGA...TGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000455123.5
CDS-3UTR GCA 90 bp CAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGACCTGTTCTGCTCCAGGCTTATCTGGTaGAAAGCTGTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QAYLVQSCGVLGILDLFCSRLIW*KAVESW
Trigger: CCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGA...GCAGAACAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR GCA 90 bp ATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGAATAGAATGTTCTGGATaGGGAGAACCTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: IHEELLAIRMTAYPDVPRIECSG*GEPLTR
Trigger: CCTCGTCAGAGGTTCTCCGCATCCAGAACATTCTAT...TCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR GCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCCAGCTCCGTGGGCGGTaGCATCTTCCCGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISQLRGR*HLPGSM
Trigger: CATCGAGCCGGGAAGATGGCACCGCCCACGGAGCTG...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTTGGCCAGCAGCTCCGTaGGCGGTGCCATCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSWPAAP*AVPSSR
Trigger: CCGGGAAGATGGCACCGCCCACGGAGCTGCTGGCCA...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
3UTR CAA 72 bp ATGTTCTGGATGCGGAGAACCTCTGACGAGGGAGGATaGTTCGGGTCATACACGAAGAGCTTCTGGCCATTA +
Preference number: 4 (lower is better)
Translates to: MFWMRRTSDEGG*FGSYTKSFWPL
Trigger: TAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATCCAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp GTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATAATCAAACCCACGACTaGTTCTTAATTCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: VRVIHEELLAIRMTAYPDNQTHD*FLIPVP
Trigger: GGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATT...ATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000455123.5
CDS-3UTR TCA 90 bp CCTATGAGCAGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACATTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: PMSSFPSYTEATELPWRTFWPLG*QPTQMS
Trigger: GGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAA...TGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCTGCTCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR GCA 90 bp CCTATGAGCAGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAAAGTCGATTTCTGAGTaGCAGAAGCCTCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PMSSFPSYTEATELPWRTKSISE*QKPLAQ
Trigger: CTGGGCGAGAGGCTTCTGGCACTCAGAAATCGACTT...TGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCTGCTCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000455123.5
CDS-3UTR GCA 90 bp GTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATTGTGGCATAGAAATGTaGCGGTCCAACAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: VRVIHEELLAIRMTAYPDCGIEM*RSNSCD
Trigger: ATCACAGCTGTTGGACCGGCACATTTCTATGCCACA...ATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR GCA 90 bp GAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGAGGAAGGTTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: EELLAIRMTAYPDVPRGRFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...CCTTCCTCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455123.5
CDS-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCTGGCCAGCAGCTCCGTaGGCGGTGCCATCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAWPAAP*AVPSSR
Trigger: CCGGGAAGATGGCACCGCCCACGGAGCTGCTGGCCA...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp GAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATAGTAGTGGTCATTTGTaGCATAGAAATGTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: EPLTREDCSGHTRRASGHSSGHL*HRNVPV
Trigger: GACCGGCACATTTCTATGCCACAAATGACCACTACT...ATGGCCAGAAGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CCA 90 bp GGGAGGATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCGCTACAGAACTTCCTTaGAGAACAGACCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: GRIVRVIHEELLAIRMTAATELP*RTDPLL
Trigger: CAACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGC...GGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAATCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CCA 90 bp GGATGCGGAGAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGAAGAGCTCAATACAAGGCTCTGTaGTATAAAGTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: GCGEPLTREDCSGHTRRAQYKAL*YKVPMS
Trigger: GCTCATAGGCACTTTATACCACAGAGCCTTGTATTG...AGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp GGATGCGGAGAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGAAGAGCTGAAGAAGCTCATGTTTaGCTGTTTTCAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: GCGEPLTREDCSGHTRRAEEAHV*LFSDAT
Trigger: TGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTC...AGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp GTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGGTATAAAGTGCCTATaGGCAGCTTCCCATCATACA +
Preference number: 4 (lower is better)
Translates to: VRVIHEELLAIRMTAYPDGIKCL*AASHHT
Trigger: TGTATGATGGGAAGCTGCTCATAGGCACTTTATACC...ATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR GCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGCAGCTCCGTGGGCGGTaGCATCTTCCCGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWQLRGR*HLPGSM
Trigger: CATCGAGCCGGGAAGATGGCACCGCCCACGGAGCTG...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTTCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RSIISIPPGLSGAKLWSPSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...AGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp GTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGCTACAGAACTTCCTTaGAGAACAGACCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: VRVIHEELLAIRMTAYPDATELP*RTDPLL
Trigger: CAACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGC...ATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CCA 90 bp ATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGACAATACAAGGCTCTGTaGTATAAAGTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: IHEELLAIRMTAYPDVPRQYKAL*YKVPMS
Trigger: GCTCATAGGCACTTTATACCACAGAGCCTTGTATTG...TCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp GCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGTAATCAAACCCACGACTaGTTCTTAATTCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASHHTLRLQNFLGEQTHCNQTHD*FLIPVP
Trigger: GGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATT...ACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000455123.5
CDS-3UTR TCA 90 bp ATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGAGAAGAAGCTCATGTTTaGCTGTTTTCAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: IHEELLAIRMTAYPDVPREEAHV*LFSDAT
Trigger: TGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTC...TCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp ATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTTTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: ISIPPGLSGAKLWSPGNFFWPLG*QPTQMS
Trigger: GGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAA...AAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR TCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATGATGCGGAGAACCTCTaGCGAGGGAGGATTGTTCGG +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNDAENL*RGRIVR
Trigger: CCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATC...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp TTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCAAGTCGATTTCTGAGTaGCAGAAGCCTCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: LDPSLVFLQAYLVQSCGVKSISE*QKPLAQ
Trigger: CTGGGCGAGAGGCTTCTGGCACTCAGAAATCGACTT...GACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR GCA 90 bp AGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGTGTGGCATAGAAATGTaGCGGTCCAACAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SFPSYTEATELPWRTDPLCGIEM*RSNSCD
Trigger: ATCACAGCTGTTGGACCGGCACATTTCTATGCCACA...CAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CCA 90 bp CAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGACCTGTTCTGCAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: QAYLVQSCGVLGILDLFCNQVAV*KVYRFY
Trigger: GTAGAATCTGTAGACCTTCCACACTGCCACCTGATT...GCAGAACAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp TTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGACCTGTCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: FLQAYLVQSCGVLGILDLSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...CAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp GCCAAATCAAACCCACGACTGATTCTTAATTCCCGTGCCCTTGGTTTTTCTTCTTCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: AKSNPRLILNSRALGFSSSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...AGAAGAAAAACCAAGGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp ATGTTCTGGATGCGGAGAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGGATGTCATTCACACTTaGAAGAAGCTCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: MFWMRRTSDEGGLFGSYTDVIHT*KKLMFD
Trigger: GTCAAACATGAGCTTCTTCCAAGTGTGAATGACATC...CGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATCCAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CCA 90 bp ATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGCTACAGAACTTCCTTaGAGAACAGACCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: IVRVIHEELLAIRMTAYPATELP*RTDPLL
Trigger: CAACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGC...TGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp CCTATGAGCAGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGGTATAAAGTGCCTATaGGCAGCTTCCCATCATACA +
Preference number: 4 (lower is better)
Translates to: PMSSFPSYTEATELPWRTGIKCL*AASHHT
Trigger: TGTATGATGGGAAGCTGCTCATAGGCACTTTATACC...TGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCTGCTCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR GCA 90 bp CAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGACCTGTTCTGCATTTTAGACCTGTTCTaGAGCCCTCATCAAATACCC +
Preference number: 4 (lower is better)
Translates to: QAYLVQSCGVLGILDLFCILDLF*SPHQIP
Trigger: GGGTATTTGATGAGGGCTGCAGAACAGGTCTAAAAT...GCAGAACAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp GTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGATGTCATTCACACTTaGAAGAAGCTCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: VRVIHEELLAIRMTAYPDDVIHT*KKLMFD
Trigger: GTCAAACATGAGCTTCTTCCAAGTGTGAATGACATC...ATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp ATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGAAGAAGCTCATGTTTaGCTGTTTTCAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: IVRVIHEELLAIRMTAYPEEAHV*LFSDAT
Trigger: TGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTC...TGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGFWPLG*QPTQMS
Trigger: GGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNFWPLG*QPTQMS
Trigger: GGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAA...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGATGCGGAGAACCTCTaGCGAGGGAGGATTGTTCGG +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNDAENL*RGRIVR
Trigger: CCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATC...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CAATACAAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTCTTCCCATCATACACTaGGGCTACAGAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QYKALWYKVPMSSFPSYTLPIIH*GYRTSL
Trigger: CAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAG...AGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTTGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp GGATTGAATGAGGCCAAATCAAACCCACGACTGATTCTTAATTCCCGTGCCCTTTTGTATCTCCTCTGCTaGATTTGGGGAAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GLNEAKSNPRLILNSRALLYLLC*IWGRKK
Trigger: CTTCTTCCTTCCCCAAATTCAGCAGAGGAGATACAA...AAGGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATTTGGCCTCATTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR GCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTCCAGGCTTATCTGGTaGAAAGCTGTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGSRLIW*KAVESW
Trigger: CCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp GGATTGAATGAGGCCAAATCAAACCCACGACTGATTCTTAATTCCCGTGCCCTTTCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: GLNEAKSNPRLILNSRALSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...AAGGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATTTGGCCTCATTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp GAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTGTATTCTTGAATTCTaGGTGGTTTACAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: EPLTREDCSGHTRRASGHCILEF*VVYNKE
Trigger: CTCTTTGTTGTAAACCACCCAGAATTCAAGAATACA...ATGGCCAGAAGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000455123.5
CDS-3UTR CCA 90 bp ATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCATTCACACTTaGAAGAAGCTCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: IVRVIHEELLAIRMTAYPDVIHT*KKLMFD
Trigger: GTCAAACATGAGCTTCTTCCAAGTGTGAATGACATC...TGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CCA 90 bp GGATTGAATGAGGCCAAATCAAACCCACGACTGATTCTTAATTCCCGTGCCCTTAGTAGTGGTCATTTGTaGCATAGAAATGTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: GLNEAKSNPRLILNSRALSSGHL*HRNVPV
Trigger: GACCGGCACATTTCTATGCCACAAATGACCACTACT...AAGGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATTTGGCCTCATTCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CCA 90 bp GGATTGAATGAGGCCAAATCAAACCCACGACTGATTCTTAATTCCCGTGCCCTTTCAGATAGAATGTTCTaGATGCGGAGAACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GLNEAKSNPRLILNSRALSDRMF*MRRTSD
Trigger: GTCAGAGGTTCTCCGCATCCAGAACATTCTATCTGA...AAGGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATTTGGCCTCATTCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CCA 90 bp AGCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGCAATACAAGGCTCTGTaGTATAAAGTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: SFPSYTEATELPWRTDPLQYKAL*YKVPMS
Trigger: GCTCATAGGCACTTTATACCACAGAGCCTTGTATTG...CAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR TCA 90 bp TCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGTTTCCACTGTATTCTTaGATTCTGGGTGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: SIISIPPGLSGAKLWSPGFPLYS*ILGGLQ
Trigger: TTGTAAACCACCCAGAATTCAAGAATACAGTGGAAA...CCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR TCA 90 bp TTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGACCTGTTTCCACTGTATTCTTaGATTCTGGGTGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: FLQAYLVQSCGVLGILDLFPLYS*ILGGLQ
Trigger: TTGTAAACCACCCAGAATTCAAGAATACAGTGGAAA...CAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR TCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCCCGGTCCAACAGCTGTaGTGTCATTCACACTTGGAA +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISPVQQL*CHSHLE
Trigger: TTCCAAGTGTGAATGACATCACAGCTGTTGGACCGG...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGATTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARFWPLG*QPTQMS
Trigger: GGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAA...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTGATGCGGAGAACCTCTaGCGAGGGAGGATTGTTCGG +
Preference number: 4 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFDAENL*RGRIVR
Trigger: CCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATC...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTAAGTCGATTTCTGAGTaGCAGAAGCCTCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSKSISE*QKPLAQ
Trigger: CTGGGCGAGAGGCTTCTGGCACTCAGAAATCGACTT...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp TTTCTTCTTTTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTCCAGGCTTATCTGGTaGAAAGCTGTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLLLDPSLVFLQAYLVQSSRLIW*KAVESW
Trigger: CCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGA...GCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAAAAGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp GCCAAATCAAACCCACGACTGATTCTTAATTCCCGTGCCCTTGGTTTTTCTTCTAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: AKSNPRLILNSRALGFSSNQVAV*KVYRFY
Trigger: GTAGAATCTGTAGACCTTCCACACTGCCACCTGATT...AGAAGAAAAACCAAGGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp TTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: LDPSLVFLQAYLVQSCGVNQVAV*KVYRFY
Trigger: GTAGAATCTGTAGACCTTCCACACTGCCACCTGATT...GACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp TTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCTCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: LDPSLVFLQAYLVQSCGVSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...GACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGATCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATAATCAAACCCACGACTaGTTCTTAATTCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNNQTHD*FLIPVP
Trigger: GGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATT...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGACCGGTCCAACAGCTGTaGTGTCATTCACACTTGGAA +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARPVQQL*CHSHLE
Trigger: TTCCAAGTGTGAATGACATCACAGCTGTTGGACCGG...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTCCGGTCCAACAGCTGTaGTGTCATTCACACTTGGAA +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSPVQQL*CHSHLE
Trigger: TTCCAAGTGTGAATGACATCACAGCTGTTGGACCGG...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCTTCTGGCCATTAGGATaGCAGCCTACCCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAFWPLG*QPTQMS
Trigger: GGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAA...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATCTTCCCATCATACACTaGGGCTACAGAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNLPIIH*GYRTSL
Trigger: CAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAG...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCCTTCCCATCATACACTaGGGCTACAGAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISLPIIH*GYRTSL
Trigger: CAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAG...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAAGTCGATTTCTGAGTaGCAGAAGCCTCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAKSISE*QKPLAQ
Trigger: CTGGGCGAGAGGCTTCTGGCACTCAGAAATCGACTT...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTCCAGGCTTATCTGGTaGAAAGCTGTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWSRLIW*KAVESW
Trigger: CCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTCCAGGCTTATCTGGTaGAAAGCTGTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNSRLIW*KAVESW
Trigger: CCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCTCCAGGCTTATCTGGTaGAAAGCTGTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSASRLIW*KAVESW
Trigger: CCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGA...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTGTGGCATAGAAATGTaGCGGTCCAACAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGCGIEM*RSNSCD
Trigger: ATCACAGCTGTTGGACCGGCACATTTCTATGCCACA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTGTGGCATAGAAATGTaGCGGTCCAACAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNCGIEM*RSNSCD
Trigger: ATCACAGCTGTTGGACCGGCACATTTCTATGCCACA...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCTGTGGCATAGAAATGTaGCGGTCCAACAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISCGIEM*RSNSCD
Trigger: ATCACAGCTGTTGGACCGGCACATTTCTATGCCACA...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATATAGAATGTTCTGGATaGGGAGAACCTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNIECSG*GEPLTR
Trigger: CCTCGTCAGAGGTTCTCCGCATCCAGAACATTCTAT...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCATAGAATGTTCTGGATaGGGAGAACCTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISIECSG*GEPLTR
Trigger: CCTCGTCAGAGGTTCTCCGCATCCAGAACATTCTAT...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCATCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TTAATTCCCGTGCCCTTGGTTTTTCTTCTTTTAGATCCATCATTAGTATTCCTCTCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LIPVPLVFLLLDPSLVFLSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...GAGGAATACTAATGATGGATCTAAAAGAAGAAAAACCAAGGGCACGGGAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTCCTCCAGGCTTATCTaGTGCAAAGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNSSRLI*CKAVES
Trigger: GGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGACCTGTGTATTCTTGAATTCTaGGTGGTTTACAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: FLQAYLVQSCGVLGILDLCILEF*VVYNKE
Trigger: CTCTTTGTTGTAAACCACCCAGAATTCAAGAATACA...CAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATGTGGAATCCATGTTCTaGCAGTTGGAAGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNVESMF*QLEGKG
Trigger: ACCTTTGCCTTCCAACTGCCAGAACATGGATTCCAC...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp GCCAAATCAAACCCACGACTGATTCTTAATTCCCGTGCCCTTGGTTTTTCTTCTGAAGAAGCTCATGTTTaGCTGTTTTCAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: AKSNPRLILNSRALGFSSEEAHV*LFSDAT
Trigger: TGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTC...AGAAGAAAAACCAAGGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000491069.5
CDS-3UTR TCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGCCGGTCCAACAGCTGTaGTGTCATTCACACTTGGAA +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWPVQQL*CHSHLE
Trigger: TTCCAAGTGTGAATGACATCACAGCTGTTGGACCGG...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTCTTCCCATCATACACTaGGGCTACAGAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSLPIIH*GYRTSL
Trigger: CAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAG...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGACTTCCCATCATACACTaGGGCTACAGAACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARLPIIH*GYRTSL
Trigger: CAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAG...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCGTTGGAAGGCAAAGGTaGGGCTTACTTTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISVGRQR*GLLCAK
Trigger: TTTTGCACAAAGTAAGCCTCACCTTTGCCTTCCAAC...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp TTTCTTCTTTTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCATAGAATGTTCTGGATaGGGAGAACCTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: FLLLDPSLVFLQAYLVQSIECSG*GEPLTR
Trigger: CCTCGTCAGAGGTTCTCCGCATCCAGAACATTCTAT...GCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAAAAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNNQVAV*KVYRFY
Trigger: GTAGAATCTGTAGACCTTCCACACTGCCACCTGATT...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTGAGGCTAAAAAGCCAGACCATTaGGAAGTATGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: KALWYKVPMSSFPSYTEAKKPDH*EVCQYL
Trigger: AAGATATTGACATACTTCCCAATGGTCTGGCTTTTT...AGCCTCAGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455123.5
CDS-3UTR CCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCTCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTCAGATAGAATGTTCTaGATGCGGAGAACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGSDRMF*MRRTSD
Trigger: GTCAGAGGTTCTCCGCATCCAGAACATTCTATCTGA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTGCTACAGAACTTCCTTaGAGAACAGACCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGATELP*RTDPLL
Trigger: CAACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGC...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CAATACAAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTCTGGGTCAATGTTGCTaGTTAAATTCCCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: QYKALWYKVPMSSFPSYTLGQCC*LNSLRI
Trigger: AATTCTGAGGGAATTTAACCAGCAACATTGACCCAG...AGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTTGTATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455123.5
CDS-3UTR TCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCAAATCAAACCCACGACTaGTTCTTAATTCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSNQTHD*FLIPVP
Trigger: GGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATT...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp TTAATTCCCGTGCCCTTGGTTTTTCTTCTTTTAGATCCATCATTAGTATTCCTCAATCAAACCCACGACTaGTTCTTAATTCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LIPVPLVFLLLDPSLVFLNQTHD*FLIPVP
Trigger: GGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATT...GAGGAATACTAATGATGGATCTAAAAGAAGAAAAACCAAGGGCACGGGAATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR TCA 90 bp CAATACAAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTCATCAGGTGAAATATTaGTCCCATTTGCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: QYKALWYKVPMSSFPSYTHQVKY*SHLLNQ
Trigger: TTGATTCAGCAAATGGGATCAATATTTCACCTGATG...AGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTTGTATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000483292.5
CDS-3UTR TCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAGGTATAAAGTGCCTATaGGCAGCTTCCCATCATACA +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARGIKCL*AASHHT
Trigger: TGTATGATGGGAAGCTGCTCATAGGCACTTTATACC...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp TTTCTTCTTTTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCGGTATAAAGTGCCTATaGGCAGCTTCCCATCATACA +
Preference number: 4 (lower is better)
Translates to: FLLLDPSLVFLQAYLVQSGIKCL*AASHHT
Trigger: TGTATGATGGGAAGCTGCTCATAGGCACTTTATACC...GCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAAAAGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR TCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTGTTGGAAGGCAAAGGTaGGGCTTACTTTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSVGRQR*GLLCAK
Trigger: TTTTGCACAAAGTAAGCCTCACCTTTGCCTTCCAAC...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp TTTCTTCTTTTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTTGTATCTCCTCTGCTaGATTTGGGGAAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FLLLDPSLVFLQAYLVQSLYLLC*IWGRKK
Trigger: CTTCTTCCTTCCCCAAATTCAGCAGAGGAGATACAA...GCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAAAAGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR GCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCATGTGGCATAGAAATGTaGCGGTCCAACAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSCGIEM*RSNSCD
Trigger: ATCACAGCTGTTGGACCGGCACATTTCTATGCCACA...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATATAGAATGTTCTGGATaGGGAGAACCTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNIECSG*GEPLTR
Trigger: CCTCGTCAGAGGTTCTCCGCATCCAGAACATTCTAT...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCAATAGAATGTTCTGGATaGGGAGAACCTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSIECSG*GEPLTR
Trigger: CCTCGTCAGAGGTTCTCCGCATCCAGAACATTCTAT...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCATAGAATGTTCTGGATaGGGAGAACCTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAIECSG*GEPLTR
Trigger: CCTCGTCAGAGGTTCTCCGCATCCAGAACATTCTAT...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSNQVAV*KVYRFY
Trigger: GTAGAATCTGTAGACCTTCCACACTGCCACCTGATT...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGATCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTAGTGGTCATTTGTaGCATAGAAATGTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARSSGHL*HRNVPV
Trigger: GACCGGCACATTTCTATGCCACAAATGACCACTACT...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTAGTAGTGGTCATTTGTaGCATAGAAATGTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSSSGHL*HRNVPV
Trigger: GACCGGCACATTTCTATGCCACAAATGACCACTACT...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGATCAGATAGAATGTTCTaGATGCGGAGAACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARSDRMF*MRRTSD
Trigger: GTCAGAGGTTCTCCGCATCCAGAACATTCTATCTGA...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCCAATACAAGGCTCTGTaGTATAAAGTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISQYKAL*YKVPMS
Trigger: GCTCATAGGCACTTTATACCACAGAGCCTTGTATTG...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATACAAGGCTCTGTaGTATAAAGTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGQYKAL*YKVPMS
Trigger: GCTCATAGGCACTTTATACCACAGAGCCTTGTATTG...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CAATACAAGGCTCTGTGGTATAAAGTGCCTATGAGCAGCTTCCCATCATACACTTTTCTGTCCCTTGCTTaGCATTTTAAAGAACCTGTT +
Preference number: 4 (lower is better)
Translates to: QYKALWYKVPMSSFPSYTFLSLA*HFKEPV
Trigger: AACAGGTTCTTTAAAATGCCAAGCAAGGGACAGAAA...AGTGTATGATGGGAAGCTGCTCATAGGCACTTTATACCACAGAGCCTTGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455123.5
CDS-3UTR TCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATGAAGAAGCTCATGTTTaGCTGTTTTCAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNEEAHV*LFSDAT
Trigger: TGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTC...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCGAAGAAGCTCATGTTTaGCTGTTTTCAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISEEAHV*LFSDAT
Trigger: TGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTC...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCGGTATAAAGTGCCTATaGGCAGCTTCCCATCATACA +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAGIKCL*AASHHT
Trigger: TGTATGATGGGAAGCTGCTCATAGGCACTTTATACC...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGGGTATAAAGTGCCTATaGGCAGCTTCCCATCATACA +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWGIKCL*AASHHT
Trigger: TGTATGATGGGAAGCTGCTCATAGGCACTTTATACC...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSANQVAV*KVYRFY
Trigger: GTAGAATCTGTAGACCTTCCACACTGCCACCTGATT...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWNQVAV*KVYRFY
Trigger: GTAGAATCTGTAGACCTTCCACACTGCCACCTGATT...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCAAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSNQVAV*KVYRFY
Trigger: GTAGAATCTGTAGACCTTCCACACTGCCACCTGATT...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAAAAAAGCCAGACCATTaGGAAGTATGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: LVFLQAYLVQSCGVLGILKKPDH*EVCQYL
Trigger: AAGATATTGACATACTTCCCAATGGTCTGGCTTTTT...TAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp TTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCAAAAAGCCAGACCATTaGGAAGTATGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: LDPSLVFLQAYLVQSCGVKKPDH*EVCQYL
Trigger: AAGATATTGACATACTTCCCAATGGTCTGGCTTTTT...GACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNSGAKL*SPGNFR
Trigger: TCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTGATGTCATTCACACTTaGAAGAAGCTCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGDVIHT*KKLMFD
Trigger: GTCAAACATGAGCTTCTTCCAAGTGTGAATGACATC...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGAGTAGTGGTCATTTGTaGCATAGAAATGTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWSSGHL*HRNVPV
Trigger: GACCGGCACATTTCTATGCCACAAATGACCACTACT...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATAGTAGTGGTCATTTGTaGCATAGAAATGTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNSSGHL*HRNVPV
Trigger: GACCGGCACATTTCTATGCCACAAATGACCACTACT...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTCAGATAGAATGTTCTaGATGCGGAGAACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWSDRMF*MRRTSD
Trigger: GTCAGAGGTTCTCCGCATCCAGAACATTCTATCTGA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCGCTACAGAACTTCCTTaGAGAACAGACCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAATELP*RTDPLL
Trigger: CAACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGC...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGGCTACAGAACTTCCTTaGAGAACAGACCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWATELP*RTDPLL
Trigger: CAACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGC...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATCTGGGTCAATGTTGCTaGTTAAATTCCCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNLGQCC*LNSLRI
Trigger: AATTCTGAGGGAATTTAACCAGCAACATTGACCCAG...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCCTGGGTCAATGTTGCTaGTTAAATTCCCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISLGQCC*LNSLRI
Trigger: AATTCTGAGGGAATTTAACCAGCAACATTGACCCAG...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTGTGGAATCCATGTTCTaGCAGTTGGAAGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFVESMF*QLEGKG
Trigger: ACCTTTGCCTTCCAACTGCCAGAACATGGATTCCAC...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
3UTR CAA 72 bp GCTGTGATGTCATTCACACTTGGAAGAAGCTCATGTTaGACTGTTTTCAGATGCAACAGAGAATTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AVMSFTLGRSSC*TVFRCNREFSA
Trigger: AGCAGAAAATTCTCTGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTCCAAGTGTGAATGACATCACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR TCA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTTTCCACTGTATTCTTaGATTCTGGGTGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGFPLYS*ILGGLQ
Trigger: TTGTAAACCACCCAGAATTCAAGAATACAGTGGAAA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTGAAGAAGCTCATGTTTaGCTGTTTTCAGATGCAACA +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSEEAHV*LFSDAT
Trigger: TGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTC...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCCATCAGGTGAAATATTaGTCCCATTTGCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISHQVKY*SHLLNQ
Trigger: TTGATTCAGCAAATGGGATCAATATTTCACCTGATG...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTGTTGGAAGGCAAAGGTaGGGCTTACTTTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFVGRQR*GLLCAK
Trigger: TTTTGCACAAAGTAAGCCTCACCTTTGCCTTCCAAC...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATCACTCGCTATTCCAGTaGGAAACTTACATAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNHSLFQ*ETYIES
Trigger: GCTTTCTATGTAAGTTTCTCACTGGAATAGCGAGTG...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633192.1
CDS-3UTR GCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTTTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTTCAGATAGAATGTTCTaGATGCGGAGAACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFSDRMF*MRRTSD
Trigger: GTCAGAGGTTCTCCGCATCCAGAACATTCTATCTGA...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCACAATACAAGGCTCTGTaGTATAAAGTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSQYKAL*YKVPMS
Trigger: GCTCATAGGCACTTTATACCACAGAGCCTTGTATTG...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGCAATACAAGGCTCTGTaGTATAAAGTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWQYKAL*YKVPMS
Trigger: GCTCATAGGCACTTTATACCACAGAGCCTTGTATTG...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTTTCTGTCCCTTGCTTaGCATTTTAAAGAACCTGTT +
Preference number: 4 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNFLSLA*HFKEPV
Trigger: AACAGGTTCTTTAAAATGCCAAGCAAGGGACAGAAA...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTTTTCCACTGTATTCTTaGATTCTGGGTGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSFPLYS*ILGGLQ
Trigger: TTGTAAACCACCCAGAATTCAAGAATACAGTGGAAA...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCATTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR GCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCTTTCTGGGTCAATGTTaGTGGTTAAATTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAFLGQC*WLNSLR
Trigger: TCTGAGGGAATTTAACCAGCAACATTGACCCAGAAA...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCTGTATTCTTGAATTCTaGGTGGTTTACAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISCILEF*VVYNKE
Trigger: CTCTTTGTTGTAAACCACCCAGAATTCAAGAATACA...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCGATGTCATTCACACTTaGAAGAAGCTCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSADVIHT*KKLMFD
Trigger: GTCAAACATGAGCTTCTTCCAAGTGTGAATGACATC...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCAGATGTCATTCACACTTaGAAGAAGCTCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSDVIHT*KKLMFD
Trigger: GTCAAACATGAGCTTCTTCCAAGTGTGAATGACATC...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCACTGGGTCAATGTTGCTaGTTAAATTCCCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSLGQCC*LNSLRI
Trigger: AATTCTGAGGGAATTTAACCAGCAACATTGACCCAG...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCCTGGGTCAATGTTGCTaGTTAAATTCCCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSALGQCC*LNSLRI
Trigger: AATTCTGAGGGAATTTAACCAGCAACATTGACCCAG...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGGGCCGTTCCTTACTaGAATAAAATTAACTACACA +
Preference number: 4 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARRAVPY*NKINYT
Trigger: TGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTAGGGCCGTTCCTTACTaGAATAAAATTAACTACACA +
Preference number: 4 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSRAVPY*NKINYT
Trigger: TGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCTTCACTCTATTTCAGTaGAATCCATGTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAFTLFQ*NPCSGS
Trigger: ACTGCCAGAACATGGATTCCACTGAAATAGAGTGAA...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTTCACTCTATTTCAGTaGAATCCATGTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNFTLFQ*NPCSGS
Trigger: ACTGCCAGAACATGGATTCCACTGAAATAGAGTGAA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp TTGGTTTTTCTTCTTTTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGTTTCCACTGTATTCTTaGATTCTGGGTGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: LVFLLLDPSLVFLQAYLVFPLYS*ILGGLQ
Trigger: TTGTAAACCACCCAGAATTCAAGAATACAGTGGAAA...CACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAAAAGAAGAAAAACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR TCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCTTTCCACTGTATTCTTaGATTCTGGGTGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAFPLYS*ILGGLQ
Trigger: TTGTAAACCACCCAGAATTCAAGAATACAGTGGAAA...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATCATCAGGTGAAATATTaGTCCCATTTGCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNHQVKY*SHLLNQ
Trigger: TTGATTCAGCAAATGGGATCAATATTTCACCTGATG...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp CTTGGTTTTTCTTCTTTTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTCATCAGGTGAAATATTaGTCCCATTTGCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: LGFSSFRSIISIPPGLSGHQVKY*SHLLNQ
Trigger: TTGATTCAGCAAATGGGATCAATATTTCACCTGATG...ACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAAAAGAAGAAAAACCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR TCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATATTAGGCTCATGATGTaGAACTTTGAATTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNIRLMM*NFEFLH
Trigger: GTGAAGGAATTCAAAGTTTCACATCATGAGCCTAAT...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633192.1
CDS-3UTR CCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCAAGGGCCGTTCCTTACTaGAATAAAATTAACTACACA +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSRAVPY*NKINYT
Trigger: TGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGGGCCGTTCCTTACTaGAATAAAATTAACTACACA +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSARAVPY*NKINYT
Trigger: TGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCATTTCTGTCCCTTGCTTaGCATTTTAAAGAACCTGTT +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSFLSLA*HFKEPV
Trigger: AACAGGTTCTTTAAAATGCCAAGCAAGGGACAGAAA...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTTTCACTCTATTTCAGTaGAATCCATGTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFFTLFQ*NPCSGS
Trigger: ACTGCCAGAACATGGATTCCACTGAAATAGAGTGAA...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR TCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTCATCAGGTGAAATATTaGTCCCATTTGCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFHQVKY*SHLLNQ
Trigger: TTGATTCAGCAAATGGGATCAATATTTCACCTGATG...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATAAAAAGCCAGACCATTaGGAAGTATGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNKKPDH*EVCQYL
Trigger: AAGATATTGACATACTTCCCAATGGTCTGGCTTTTT...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGAAAAAGCCAGACCATTaGGAAGTATGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWKKPDH*EVCQYL
Trigger: AAGATATTGACATACTTCCCAATGGTCTGGCTTTTT...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCAAAAAAGCCAGACCATTaGGAAGTATGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSKKPDH*EVCQYL
Trigger: AAGATATTGACATACTTCCCAATGGTCTGGCTTTTT...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCTGTATTCTTGAATTCTaGGTGGTTTACAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSACILEF*VVYNKE
Trigger: CTCTTTGTTGTAAACCACCCAGAATTCAAGAATACA...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTAAAAAGCCAGACCATTaGGAAGTATGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFKKPDH*EVCQYL
Trigger: AAGATATTGACATACTTCCCAATGGTCTGGCTTTTT...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CCA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTTGTATTCTTGAATTCTaGGTGGTTTACAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFCILEF*VVYNKE
Trigger: CTCTTTGTTGTAAACCACCCAGAATTCAAGAATACA...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS GCA 90 bp GGGCGCGCTGCCTCGCTCCGGCCTGGCCAGCAGCTCCGTGGGCGGTaGCATCTTCCCGGCTCGATGGTGCCGGCCGCGCTCCGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: GRAASLRPGQQLRGR*HLPGSMVPAALRPV
Trigger: GACGGGGCGGAGCGCGGCCGGCACCATCGAGCCGGGAAGATGGCACCGCCCACGGAGCTGCTGGCCAGGCCGGAGCGAGGCAGCGCGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433091.6
ENST00000490778.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp GGATGCGGAGAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGAAGAGCTTCTGACGAGGGAGGATaGTTCGGGTCATACACGAAG +
Preference number: 5 (lower is better)
Translates to: GCGEPLTREDCSGHTRRASDEGG*FGSYTK
Trigger: CTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGA...AGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTCTCCGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CAA 90 bp GAACCTCTGACGAGGGAGGATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTCTGACGAGGGAGGATaGTTCGGGTCATACACGAAG +
Preference number: 5 (lower is better)
Translates to: EPLTREDCSGHTRRASGHSDEGG*FGSYTK
Trigger: CTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGA...ATGGCCAGAAGCTCTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS GCA 90 bp CTCCAGAAAAACTGGACCTATGAAGATGCCAAGAACTCCTATGTCTaGCCAAGCCAGGGAGGTAGGTGGTCAGAACCTCCTCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: LQKNWTYEDAKNSYV*PSQGGRWSEPPHLS
Trigger: GGACAGATGAGGAGGTTCTGACCACCTACCTCCCTGGCTTGGGCAGACATAGGAGTTCTTGGCATCTTCATAGGTCCAGTTTTTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478801.5
CDS TCA 90 bp TACCTTCGGGACGGCCCGGACACGCCTTACATTAGGCTCATGATGTaGAACTTTGAATTCCTTCACTTCCTTTTTCAAACAACCCACCCG +
Preference number: 5 (lower is better)
Translates to: YLRDGPDTPYIRLMM*NFEFLHFLFQTTHP
Trigger: CGGGTGGGTTGTTTGAAAAAGGAAGTGAAGGAATTCAAAGTTTCACATCATGAGCCTAATGTAAGGCGTGTCCGGGCCGTCCCGAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633192.1
CDS-3UTR CAA 90 bp GAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGAGGAAGGATCTGTAGTAAACAACATTaGCCCAGTGTAAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: ELLAIRMTAYPDVPRGRICSKQH*PSVSSS
Trigger: ACTTGAACTTACACTGGGCAAATGTTGTTTACTACA...GATCCTTCCTCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS TCA 90 bp CCAGATACCTTCGGGACGGCCCGGACACGCCTTACATTAGGCTCATaGTGTGAAACTTTGAATTCCTTCACTTCCTTTTTCAAACAACCC +
Preference number: 5 (lower is better)
Translates to: PDTFGTARTRLTLGS*CETLNSFTSFFKQP
Trigger: GGGTTGTTTGAAAAAGGAAGTGAAGGAATTCAAAGTTTCACATCATGAGCCTAATGTAAGGCGTGTCCGGGCCGTCCCGAAGGTATCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633192.1
CDS GCA 90 bp CAATTGCTCAAGGTCACAAACTGGGAAGCTGGGACTCAAAGCCTTTaGTCTGACAATTCCTTTAATCAGGTGGCAGTGTGGAAGGTCTAC +
Preference number: 5 (lower is better)
Translates to: QLLKVTNWEAGTQSL*SDNSFNQVAVWKVY
Trigger: GTAGACCTTCCACACTGCCACCTGATTAAAGGAATTGTCAGAGCAAAGGCTTTGAGTCCCAGCTTCCCAGTTTGTGACCTTGAGCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471883.1
CDS-3UTR CAA 90 bp GCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGTGGCTACAGAACTTCCTaGGAGAACAGACCCATTGTT +
Preference number: 5 (lower is better)
Translates to: ASHHTLRLQNFLGEQTHCGYRTS*ENRPIV
Trigger: AACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCC...ACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS CCA 90 bp GTGGAAATTTGTTCACTGCTAGATCCCAGTGCCTGGAACAGTGCCTaGCATACAGTCCATCCTTCTCCCACTGATTCAAAATATCACCTT +
Preference number: 5 (lower is better)
Translates to: VEICSLLDPSAWNSA*HTVHPSPTDSKYHL
Trigger: AAGGTGATATTTTGAATCAGTGGGAGAAGGATGGACTGTATGCCAGGCACTGTTCCAGGCACTGGGATCTAGCAGTGAACAAATTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460873.5
CDS-3UTR CAA 90 bp GCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGTCTGATGCCATGTGGATaGAATGAGGCCAAATCAAAC +
Preference number: 5 (lower is better)
Translates to: ASHHTLRLQNFLGEQTHCLMPCG*NEAKSN
Trigger: GTTTGATTTGGCCTCATTCAATCCACATGGCATCAG...ACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000455123.5
CDS-3UTR CAA 90 bp GCTTCCCATCATACACTGAGGCTACAGAACTTCCTTGGAGAACAGACCCATTGTAGAAGTAGTGGTCATTaGTGGCATAGAAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: ASHHTLRLQNFLGEQTHCRSSGH*WHRNVP
Trigger: CGGCACATTTCTATGCCACAAATGACCACTACTTCT...ACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCCTCAGTGTATGATGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CAA 90 bp ATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGATGTAGTAAACAACATTaGCCCAGTGTAAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: IHEELLAIRMTAYPDVPRCSKQH*PSVSSS
Trigger: ACTTGAACTTACACTGGGCAAATGTTGTTTACTACA...TCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000455123.5
ENST00000483292.5
CDS-3UTR CAA 90 bp ATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCAGATGTCCCCCGATCATCAGGTGAAATATaGATCCCATTTGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: IHEELLAIRMTAYPDVPRSSGEI*IPFAES
Trigger: TGATTCAGCAAATGGGATCAATATTTCACCTGATGA...TCGGGGGACATCTGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000483292.5
CDS CCA 90 bp AAGCTGGGACTCAAAGCCTTTGCTCTGACAATTCCTTTAATCAGGTaGCAGTGTGGAAGGTCTACAGATTCTACTTCTCTGGAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: KLGLKAFALTIPLIR*QCGRSTDSTSLEAL
Trigger: TAAAGCCTCCAGAGAAGTAGAATCTGTAGACCTTCCACACTGCCACCTGATTAAAGGAATTGTCAGAGCAAAGGCTTTGAGTCCCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471883.1
CDS CCA 90 bp AGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGACCAGTCAGGTGTCAGAGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: RSIISIPPGLSGAKL*SPGNFRPVRCQSWL
Trigger: TAACCAACTCTGACACCTGACTGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478801.5
CDS-3UTR CAA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTCTGACGAGGGAGGATaGTTCGGGTCATACACGAAG +
Preference number: 5 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNSDEGG*FGSYTK
Trigger: CTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGA...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTCTGACGAGGGAGGATaGTTCGGGTCATACACGAAG +
Preference number: 5 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGSDEGG*FGSYTK
Trigger: CTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp GTCATTCACACTTGGAAGAAGCTCATGTTTGACTGTTTTCAGATGCAACAGAGATCTGACGAGGGAGGATaGTTCGGGTCATACACGAAG +
Preference number: 5 (lower is better)
Translates to: VIHTWKKLMFDCFQMQQRSDEGG*FGSYTK
Trigger: CTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGA...TCTCTGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTCCAAGTGTGAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CAA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCTCTGACGAGGGAGGATaGTTCGGGTCATACACGAAG +
Preference number: 5 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISSDEGG*FGSYTK
Trigger: CTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGA...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp TTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGGCTACAGAACTTCCTaGGAGAACAGACCCATTGTT +
Preference number: 5 (lower is better)
Translates to: LVFLQAYLVQSCGVLGILGYRTS*ENRPIV
Trigger: AACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCC...TAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CAA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTTCCATGTTCTGGCAGTaGGAAGGCAAAGGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGSMFWQ*EGKGEA
Trigger: AGCCTCACCTTTGCCTTCCAACTGCCAGAACATGGA...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ATTGTTCGGGTCATACACGAAGAGCTTCTGGCCATTAGGATGACAGCCTACCCATTAATTCCCGTGCCCTaGGTTTTTCTTCTTTTAGAT +
Preference number: 5 (lower is better)
Translates to: IVRVIHEELLAIRMTAYPLIPVP*VFLLLD
Trigger: ATCTAAAAGAAGAAAAACCAAGGGCACGGGAATTAA...TGGGTAGGCTGTCATCCTAATGGCCAGAAGCTCTTCGTGTATGACCCGAACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446142.5
ENST00000455123.5
CDS-3UTR CAA 90 bp ATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTCTGATGCCATGTGGATaGAATGAGGCCAAATCAAAC +
Preference number: 5 (lower is better)
Translates to: ISIPPGLSGAKLWSPGNFLMPCG*NEAKSN
Trigger: GTTTGATTTGGCCTCATTCAATCCACATGGCATCAG...AAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CAA 90 bp TTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGATGCCATGTGGATaGAATGAGGCCAAATCAAAC +
Preference number: 5 (lower is better)
Translates to: LDPSLVFLQAYLVQSCGVLMPCG*NEAKSN
Trigger: GTTTGATTTGGCCTCATTCAATCCACATGGCATCAG...GACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CAA 90 bp CAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTAGACCTGTTCTGCATTTCCACTGTATTCTaGAATTCTGGGTGGTTTACA +
Preference number: 5 (lower is better)
Translates to: QAYLVQSCGVLGILDLFCISTVF*NSGWFT
Trigger: TGTAAACCACCCAGAATTCAAGAATACAGTGGAAAT...GCAGAACAGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CAA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGATCTGACGAGGGAGGATaGTTCGGGTCATACACGAAG +
Preference number: 5 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARSDEGG*FGSYTK
Trigger: CTTCGTGTATGACCCGAACAATCCTCCCTCGTCAGA...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTTCCATGTTCTGGCAGTaGGAAGGCAAAGGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSSMFWQ*EGKGEA
Trigger: AGCCTCACCTTTGCCTTCCAACTGCCAGAACATGGA...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS CCA 90 bp ACTCAAAGCCTTTGCTCTGACAATTCCTTTAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTACTTCTCTGGAGGCTTTAAGTCGATT +
Preference number: 5 (lower is better)
Translates to: TQSLCSDNSFNQVAV*KVYRFYFSGGFKSI
Trigger: AATCGACTTAAAGCCTCCAGAGAAGTAGAATCTGTAGACCTTCCACACTGCCACCTGATTAAAGGAATTGTCAGAGCAAAGGCTTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471883.1
CDS-3UTR CAA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCGGCTACAGAACTTCCTaGGAGAACAGACCCATTGTT +
Preference number: 5 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISGYRTS*ENRPIV
Trigger: AACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCC...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCATCCATGTTCTGGCAGTaGGAAGGCAAAGGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSSMFWQ*EGKGEA
Trigger: AGCCTCACCTTTGCCTTCCAACTGCCAGAACATGGA...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTCCATGTTCTGGCAGTaGGAAGGCAAAGGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNSMFWQ*EGKGEA
Trigger: AGCCTCACCTTTGCCTTCCAACTGCCAGAACATGGA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS CCA 90 bp AATATCTTCAGAGCCAGCTTCAATTCCTTTAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTACTTCTCTGGAGGCTTTAAGTCGATT +
Preference number: 5 (lower is better)
Translates to: NIFRASFNSFNQVAV*KVYRFYFSGGFKSI
Trigger: AATCGACTTAAAGCCTCCAGAGAAGTAGAATCTGTAGACCTTCCACACTGCCACCTGATTAAAGGAATTGAAGCTGGCTCTGAAGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000460873.5
ENST00000478801.5
ENST00000490778.5
ENST00000491069.5
ENST00000493290.5
ENST00000493469.5
ENST00000632034.1
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCTGATGCCATGTGGATaGAATGAGGCCAAATCAAAC +
Preference number: 5 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGLMPCG*NEAKSN
Trigger: GTTTGATTTGGCCTCATTCAATCCACATGGCATCAG...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATCTGATGCCATGTGGATaGAATGAGGCCAAATCAAAC +
Preference number: 5 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNLMPCG*NEAKSN
Trigger: GTTTGATTTGGCCTCATTCAATCCACATGGCATCAG...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp GTCATTCACACTTGGAAGAAGCTCATGTTTGACTGTTTTCAGATGCAACAGAGAAGAAGTAGTGGTCATTaGTGGCATAGAAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: VIHTWKKLMFDCFQMQQRRSSGH*WHRNVP
Trigger: CGGCACATTTCTATGCCACAAATGACCACTACTTCT...TCTCTGTTGCATCTGAAAACAGTCAAACATGAGCTTCTTCCAAGTGTGAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CAA 90 bp GGATTGAATGAGGCCAAATCAAACCCACGACTGATTCTTAATTCCCGTGCCCTTTCATCAGGTGAAATATaGATCCCATTTGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: GLNEAKSNPRLILNSRALSSGEI*IPFAES
Trigger: TGATTCAGCAAATGGGATCAATATTTCACCTGATGA...AAGGGCACGGGAATTAAGAATCAGTCGTGGGTTTGATTTGGCCTCATTCAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CAA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTGGCTACAGAACTTCCTaGGAGAACAGACCCATTGTT +
Preference number: 5 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSGYRTS*ENRPIV
Trigger: AACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCC...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTGGAGTCCTGGGAATTTTATTTCCACTGTATTCTaGAATTCTGGGTGGTTTACA +
Preference number: 5 (lower is better)
Translates to: ISIPPGLSGAKLWSPGNFISTVF*NSGWFT
Trigger: TGTAAACCACCCAGAATTCAAGAATACAGTGGAAAT...AAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CAA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGGCTACAGAACTTCCTaGGAGAACAGACCCATTGTT +
Preference number: 5 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNGYRTS*ENRPIV
Trigger: AACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCC...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTATTTCTGGGTCAATGTaGCTGGTTAAATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGISGSM*LVKFPQ
Trigger: CTGAGGGAATTTAACCAGCAACATTGACCCAGAAAT...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCATTTCTGGGTCAATGTaGCTGGTTAAATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISISGSM*LVKFPQ
Trigger: CTGAGGGAATTTAACCAGCAACATTGACCCAGAAAT...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGAGAAGTAGTGGTCATTaGTGGCATAGAAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWRSSGH*WHRNVP
Trigger: CGGCACATTTCTATGCCACAAATGACCACTACTTCT...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATAGAAGTAGTGGTCATTaGTGGCATAGAAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNRSSGH*WHRNVP
Trigger: CGGCACATTTCTATGCCACAAATGACCACTACTTCT...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTAGTGGTCATTaGTGGCATAGAAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSARSSGH*WHRNVP
Trigger: CGGCACATTTCTATGCCACAAATGACCACTACTTCT...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTGGCTACAGAACTTCCTaGGAGAACAGACCCATTGTT +
Preference number: 5 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFGYRTS*ENRPIV
Trigger: AACAATGGGTCTGTTCTCCAAGGAAGTTCTGTAGCC...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCTTAATTCCCGTGCCCTaGGTTTTTCTTCTTTTAGAT +
Preference number: 5 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISLIPVP*VFLLLD
Trigger: ATCTAAAAGAAGAAAAACCAAGGGCACGGGAATTAA...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ACTTTAAGAAAGGATCAGAGAAGTAGTGGTCATTTGTGGCATAGAAATGTGCCGTTAATTCCCGTGCCCTaGGTTTTTCTTCTTTTAGAT +
Preference number: 5 (lower is better)
Translates to: TLRKDQRSSGHLWHRNVPLIPVP*VFLLLD
Trigger: ATCTAAAAGAAGAAAAACCAAGGGCACGGGAATTAA...CGGCACATTTCTATGCCACAAATGACCACTACTTCTCTGATCCTTTCTTAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CAA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTCTGATGCCATGTGGATaGAATGAGGCCAAATCAAAC +
Preference number: 5 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFLMPCG*NEAKSN
Trigger: GTTTGATTTGGCCTCATTCAATCCACATGGCATCAG...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCATTTCCACTGTATTCTaGAATTCTGGGTGGTTTACA +
Preference number: 5 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISISTVF*NSGWFT
Trigger: TGTAAACCACCCAGAATTCAAGAATACAGTGGAAAT...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATATTTCCACTGTATTCTaGAATTCTGGGTGGTTTACA +
Preference number: 5 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNISTVF*NSGWFT
Trigger: TGTAAACCACCCAGAATTCAAGAATACAGTGGAAAT...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AGGGCCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTATTTCCACTGTATTCTaGAATTCTGGGTGGTTTACA +
Preference number: 5 (lower is better)
Translates to: RAVPYWNKINYTCHTFLGISTVF*NSGWFT
Trigger: TGTAAACCACCCAGAATTCAAGAATACAGTGGAAAT...ACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTAGAAGTAGTGGTCATTaGTGGCATAGAAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFRSSGH*WHRNVP
Trigger: CGGCACATTTCTATGCCACAAATGACCACTACTTCT...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCTCATCAGGTGAAATATaGATCCCATTTGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISSSGEI*IPFAES
Trigger: TGATTCAGCAAATGGGATCAATATTTCACCTGATGA...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATATTTCTGGGTCAATGTaGCTGGTTAAATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNISGSM*LVKFPQ
Trigger: CTGAGGGAATTTAACCAGCAACATTGACCCAGAAAT...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AAACATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCATTTCTGGGTCAATGTaGCTGGTTAAATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: KHQNTLSVVLNSHSSHSAISGSM*LVKFPQ
Trigger: CTGAGGGAATTTAACCAGCAACATTGACCCAGAAAT...GGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAATTCAATTTCTGGGTCAATGTaGCTGGTTAAATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: HTFLGQCCWLNSLRISNSISGSM*LVKFPQ
Trigger: CTGAGGGAATTTAACCAGCAACATTGACCCAGAAAT...TGAATTGCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCTTTCTTTTCTGTCCCTaGCTTGGCATTTTAAAGAAC +
Preference number: 5 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISFLFCP*LGILKN
Trigger: GTTCTTTAAAATGCCAAGCAAGGGACAGAAAAGAAA...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTTTCTTTTCTGTCCCTaGCTTGGCATTTTAAAGAAC +
Preference number: 5 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNFLFCP*LGILKN
Trigger: GTTCTTTAAAATGCCAAGCAAGGGACAGAAAAGAAA...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATAAGGTGAGGCTTACTTaGTGCAAAATGTATTCACTT +
Preference number: 5 (lower is better)
Translates to: LHMPYISGSMLLVKFPQNKVRLT*CKMYSL
Trigger: AAGTGAATACATTTTGCACAAAGTAAGCCTCACCTT...ATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp ACATGCCATACATTTCTGGGTCAATGTTGCTGGTTAAATTCCCTCAGAATTAGCAAGGTGAGGCTTACTTaGTGCAAAATGTATTCACTT +
Preference number: 5 (lower is better)
Translates to: TCHTFLGQCCWLNSLRISKVRLT*CKMYSL
Trigger: AAGTGAATACATTTTGCACAAAGTAAGCCTCACCTT...GCTAATTCTGAGGGAATTTAACCAGCAACATTGACCCAGAAATGTATGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTTTAATTCCCGTGCCCTaGGTTTTTCTTCTTTTAGAT +
Preference number: 5 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSLIPVP*VFLLLD
Trigger: ATCTAAAAGAAGAAAAACCAAGGGCACGGGAATTAA...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTAAGGTGAGGCTTACTTaGTGCAAAATGTATTCACTT +
Preference number: 5 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSKVRLT*CKMYSL
Trigger: AAGTGAATACATTTTGCACAAAGTAAGCCTCACCTT...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CATCAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAAGGTGAGGCTTACTTaGTGCAAAATGTATTCACTT +
Preference number: 5 (lower is better)
Translates to: HQNTLSVVLNSHSSHSARKVRLT*CKMYSL
Trigger: AAGTGAATACATTTTGCACAAAGTAAGCCTCACCTT...TCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CAAAATACGTTATCAGTAGTTCTAAACAGCCATAGTAGTCACAGTGCCAGAAGTGTATTCTTGAATTCGTaGTCTATGAAAGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: QNTLSVVLNSHSSHSARSVFLNS*SMKVLM
Trigger: CATCAGCACTTTCATAGACAACGAATTCAAGAATAC...ACTTCTGGCACTGTGACTACTATGGCTGTTTAGAACTACTGATAACGTATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433091.6
CDS-3UTR CAA 90 bp CTTGGTTTTTCTTCTTTTAGATCCATCATTAGTATTCCTCCAGGCTTATCTGGTTTAATTCCCGTGCCCTaGGTTTTTCTTCTTTTAGAT +
Preference number: 5 (lower is better)
Translates to: LGFSSFRSIISIPPGLSGLIPVP*VFLLLD
Trigger: ATCTAAAAGAAGAAAAACCAAGGGCACGGGAATTAA...ACCAGATAAGCCTGGAGGAATACTAATGATGGATCTAAAAGAAGAAAAACCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000446142.5
ENST00000491069.5
ENST00000632034.1
CDS-3UTR CAA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATATTTCCACTGTATTCTaGAATTCTGGGTGGTTTACA +
Preference number: 5 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNISTVF*NSGWFT
Trigger: TGTAAACCACCCAGAATTCAAGAATACAGTGGAAAT...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTGTAGTAAACAACATTaGCCCAGTGTAAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWCSKQH*PSVSSS
Trigger: ACTTGAACTTACACTGGGCAAATGTTGTTTACTACA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp TTAATTCCCGTGCCCTTGGTTTTTCTTCTTTTAGATCCATCATTAGTATTCCTCTGTAGTAAACAACATTaGCCCAGTGTAAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: LIPVPLVFLLLDPSLVFLCSKQH*PSVSSS
Trigger: ACTTGAACTTACACTGGGCAAATGTTGTTTACTACA...GAGGAATACTAATGATGGATCTAAAAGAAGAAAAACCAAGGGCACGGGAATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS-3UTR CAA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTGTAGTAAACAACATTaGCCCAGTGTAAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNCSKQH*PSVSSS
Trigger: ACTTGAACTTACACTGGGCAAATGTTGTTTACTACA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp CCGTTCCTTACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATTCATCAGGTGAAATATaGATCCCATTTGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: PFLTGIKLTTHAIHFWVNSSGEI*IPFAES
Trigger: TGATTCAGCAAATGGGATCAATATTTCACCTGATGA...ATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTAAGGAACGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp TACTGGAATAAAATTAACTACACATGCCATACATTTCTGGGTCAATGTTGCTGGTCATCAGGTGAAATATaGATCCCATTTGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: YWNKINYTCHTFLGQCCWSSGEI*IPFAES
Trigger: TGATTCAGCAAATGGGATCAATATTTCACCTGATGA...CCAGCAACATTGACCCAGAAATGTATGGCATGTGTAGTTAATTTTATTCCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000633192.1
ENST00000633531.1
CDS TCA 90 bp GAAAGCAAAGTAAAGAATTTGGCCAGCACCACAACTGAAGAAAAATaGAGATATTCTATAAGGGGCCATACTTATCATCAGGTGAAATAT +
Preference number: 5 (lower is better)
Translates to: ESKVKNLASTTTEEK*RYSIRGHTYHQVKY
Trigger: ATATTTCACCTGATGATAAGTATGGCCCCTTATAGAATATCTTCATTTTTCTTCAGTTGTGGTGCTGGCCAAATTCTTTACTTTGCTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459842.1
CDS-3UTR CAA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTTGTAGTAAACAACATTaGCCCAGTGTAAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFCSKQH*PSVSSS
Trigger: ACTTGAACTTACACTGGGCAAATGTTGTTTACTACA...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS-3UTR CAA 90 bp AAAGGTGAGGCTTACTTTGTGCAAAATGTATTCACTTTATTCGAAAGCAGCTTTTTTCTTTTCTGTCCCTaGCTTGGCATTTTAAAGAAC +
Preference number: 5 (lower is better)
Translates to: KGEAYFVQNVFTLFESSFFLFCP*LGILKN
Trigger: GTTCTTTAAAATGCCAAGCAAGGGACAGAAAAGAAA...AAAGCTGCTTTCGAATAAAGTGAATACATTTTGCACAAAGTAAGCCTCACCTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000633192.1
ENST00000633531.1
CDS GCA 72 bp GCCTCGCTCCGGCCTGGCCAGCAGCTCCGTGGGCGGTaGCATCTTCCCGGCTCGATGGTGCCGGCCGCGCTC +
Preference number: 6 (lower is better)
Translates to: ASLRPGQQLRGR*HLPGSMVPAAL
Trigger: GAGCGCGGCCGGCACCATCGAGCCGGGAAGATGGCACCGCCCACGGAGCTGCTGGCCAGGCCGGAGCGAGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433091.6
ENST00000490778.5
ENST00000633192.1
ENST00000633531.1
CDS CCA 72 bp GCGCGCTGCCTCGCTCCGGCCTGGCCAGCAGCTCCGTaGGCGGTGCCATCTTCCCGGCTCGATGGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: ARCLAPAWPAAP*AVPSSRLDGAG
Trigger: GCCGGCACCATCGAGCCGGGAAGATGGCACCGCCCACGGAGCTGCTGGCCAGGCCGGAGCGAGGCAGCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433091.6
ENST00000490778.5
ENST00000633192.1
ENST00000633531.1
CDS CCA 72 bp AAGAACTCCTATGTCTGCCCAAGCCAGGGAGGTAGGTaGTCAGAACCTCCTCATCTGTCCCCTTATCACACT +
Preference number: 6 (lower is better)
Translates to: KNSYVCPSQGGR*SEPPHLSPYHT
Trigger: AGTGTGATAAGGGGACAGATGAGGAGGTTCTGACCACCTACCTCCCTGGCTTGGGCAGACATAGGAGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478801.5
CDS GCA 72 bp ACTGACTGTGGAAATTTGTTCACTGCTAGATCCCAGTaGCTGGAACAGTGCCTGGCATACAGTCCATCCTTC +
Preference number: 6 (lower is better)
Translates to: TDCGNLFTARSQ*LEQCLAYSPSF
Trigger: GAAGGATGGACTGTATGCCAGGCACTGTTCCAGGCACTGGGATCTAGCAGTGAACAAATTTCCACAGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460873.5
CDS CCA 72 bp TGTTCACTGCTAGATCCCAGTGCCTGGAACAGTGCCTaGCATACAGTCCATCCTTCTCCCACTGATTCAAAA +
Preference number: 6 (lower is better)
Translates to: CSLLDPSAWNSA*HTVHPSPTDSK
Trigger: TTTTGAATCAGTGGGAGAAGGATGGACTGTATGCCAGGCACTGTTCCAGGCACTGGGATCTAGCAGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460873.5
CDS CCA 72 bp ATTAGTATTCCTCCAGGCTTATCTGGTGCAAAGCTGTaGAGTCCTGGGAATTTTAGACCAGTCAGGTGTCAG +
Preference number: 6 (lower is better)
Translates to: ISIPPGLSGAKL*SPGNFRPVRCQ
Trigger: CTGACACCTGACTGGTCTAAAATTCCCAGGACTCCACAGCTTTGCACCAGATAAGCCTGGAGGAATACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478801.5
CDS CAA 90 bp GTTCTGCAGCCCTCATCAAATACCCTTGTATCTCCTCTGCTGAATTaGGGGAAGGAAGAAGACACTCACCACACAATTCCTTTAATCAGG +
Preference number: 6 (lower is better)
Translates to: VLQPSSNTLVSPLLN*GKEEDTHHTIPLIR
Trigger: CCTGATTAAAGGAATTGTGTGGTGAGTGTCTTCTTCCTTCCCCAAATTCAGCAGAGGAGATACAAGGGTATTTGATGAGGGCTGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446142.5
CDS CCA 72 bp AGAGCCAGCTTCAATTCCTTTAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTACTTCTCTGGAGGCTTT +
Preference number: 6 (lower is better)
Translates to: RASFNSFNQVAV*KVYRFYFSGGF
Trigger: AAAGCCTCCAGAGAAGTAGAATCTGTAGACCTTCCACACTGCCACCTGATTAAAGGAATTGAAGCTGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000460873.5
ENST00000478801.5
ENST00000490778.5
ENST00000491069.5
ENST00000493290.5
ENST00000493469.5
ENST00000632034.1
ENST00000633192.1
ENST00000633531.1
CDS CCA 72 bp CTTTGCTCTGACAATTCCTTTAATCAGGTGGCAGTGTaGAAGGTCTACAGATTCTACTTCTCTGGAGGCTTT +
Preference number: 6 (lower is better)
Translates to: LCSDNSFNQVAV*KVYRFYFSGGF
Trigger: AAAGCCTCCAGAGAAGTAGAATCTGTAGACCTTCCACACTGCCACCTGATTAAAGGAATTGTCAGAGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471883.1
CDS CCA 72 bp CTCAAAGCCTTTGCTCTGACAATTCCTTTAATCAGGTaGCAGTGTGGAAGGTCTACAGATTCTACTTCTCTG +
Preference number: 6 (lower is better)
Translates to: LKAFALTIPLIR*QCGRSTDSTSL
Trigger: CAGAGAAGTAGAATCTGTAGACCTTCCACACTGCCACCTGATTAAAGGAATTGTCAGAGCAAAGGCTTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471883.1
CDS CCA 72 bp ATATCTTCAGAGCCAGCTTCAATTCCTTTAATCAGGTaGCAGTGTGGAAGGTCTACAGATTCTACTTCTCTG +
Preference number: 6 (lower is better)
Translates to: ISSEPASIPLIR*QCGRSTDSTSL
Trigger: CAGAGAAGTAGAATCTGTAGACCTTCCACACTGCCACCTGATTAAAGGAATTGAAGCTGGCTCTGAAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000222572.8
ENST00000433091.6
ENST00000455123.5
ENST00000460873.5
ENST00000478801.5
ENST00000490778.5
ENST00000491069.5
ENST00000493290.5
ENST00000493469.5
ENST00000632034.1
ENST00000633192.1
ENST00000633531.1
CDS TCA 72 bp GATTCAAAATATCACCTTTATCATGTGCTAGATCTCTaGCATTTACATATTGGTCTATTTAGGGACTCTCTG +
Preference number: 6 (lower is better)
Translates to: DSKYHLYHVLDL*HLHIGLFRDSL
Trigger: CAGAGAGTCCCTAAATAGACCAATATGTAAATGTCAGAGATCTAGCACATGATAAAGGTGATATTTTGAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460873.5