RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POMGNT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000085998

Ensembl transcript IDs: ENST00000371984.8, ENST00000371992.1, ENST00000396420.7, ENST00000463030.1, ENST00000480972.1, ENST00000485714.1, ENST00000489985.1, ENST00000497439.5

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTaGGTAAGAGCCAGCCCCACCCTCAGGGCAGCATTCCAGCCCAAA +
Preference number: 1 (lower is better)
Translates to: WAPAGPVHGLGTAVS*VRASPTLRAAFQPK
Trigger: TTTGGGCTGGAATGCTGCCCTGAGGGTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR CCA 90 bp TCACATTTCACAGCCCTTGCCTGGGCGGTCTCCCTTGCCCGTCCCTaGCAATCACTGCTGCTCCATGTTGTACTCCACCCGAGGCACCCC +
Preference number: 1 (lower is better)
Translates to: SHFTALAWAVSLARP*QSLLLHVVLHPRHP
Trigger: GGGGTGCCTCGGGTGGAGTACAACATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGTGAAATGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 90 bp GTGTGGGGTCCTTGCAGCTGCATACACTTCCATAGCCCTCAACTTTaGTGCAGAAGCGCCGGCGGCGACGGTTCAGCTCTGTGTCTGCCC +
Preference number: 1 (lower is better)
Translates to: VWGPCSCIHFHSPQL*CRSAGGDGSALCLP
Trigger: GGGCAGACACAGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCTATGGAAGTGTATGCAGCTGCAAGGACCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CCA 90 bp GCCCACCTCTGCAATCCAAGGCCTTCACATTTCACAGCCCTTGCCTaGGCGGTCTCCCTTGCCCGTCCCTGGCAATCACTGCTGCTCCAT +
Preference number: 1 (lower is better)
Translates to: AHLCNPRPSHFTALA*AVSLARPWQSLLLH
Trigger: ATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGTGAAATGTGAAGGCCTTGGATTGCAGAGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 90 bp TGGGGTCCTTGCAGCTGCATACACTTCCATAGCCCTCAACTTTGCTaGAGAAGCGCCGGCGGCGACGGTTCAGCTCTGTGTCTGCCCAGT +
Preference number: 1 (lower is better)
Translates to: WGPCSCIHFHSPQLC*RSAGGDGSALCLPS
Trigger: ACTGGGCAGACACAGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCTATGGAAGTGTATGCAGCTGCAAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 90 bp TCCAAGGCCTTCACATTTCACAGCCCTTGCCTGGGCGGTCTCCCTTaGCCGTCCCTGGCAATCACTGCTGCTCCATGTTGTACTCCACCC +
Preference number: 1 (lower is better)
Translates to: SKAFTFHSPCLGGLP*PSLAITAAPCCTPP
Trigger: GGGTGGAGTACAACATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGTGAAATGTGAAGGCCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 90 bp GGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTaGCACGCACATCCAGGTCCCAGATATGGAGGCACTTGGCAAGCT +
Preference number: 1 (lower is better)
Translates to: GSGSSSETISTGPDG*HAHPGPRYGGTWQA
Trigger: AGCTTGCCAAGTGCCTCCATATCTGGGACCTGGATGTGCGTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 90 bp AGCCCATTCCCAGGCTTACCTGTACAGGTAATTGGGTCGGTTCCCTaGAATGACAGCCACAGGCACATTGAGGACCTTGTTGTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: SPFPGLPVQVIGSVP*NDSHRHIEDLVVWE
Trigger: CTCCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGGGAATGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR TCA 90 bp GATTCTGAGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATaGGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCT +
Preference number: 1 (lower is better)
Translates to: DSEPGLESEGIQRAG*AARDRNDSQVLSCP
Trigger: AGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCTCAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR CCA 90 bp TTTCTCCATTCGAATAAAGGCCACGTAGGTGTGGCCCTCTGTGTCTaGCAGGAAAGAGTCTTCACAAGGGTTCTTGCTGTGGTCCAGAAC +
Preference number: 1 (lower is better)
Translates to: FLHSNKGHVGVALCV*QERVFTRVLAVVQN
Trigger: GTTCTGGACCACAGCAAGAACCCTTGTGAAGACTCTTTCCTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATTCGAATGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 90 bp TCAACTCAGGTTCCCCTGTGTTTACAGCTGGGCCCAGAGTCCCTATaGTTACCCACAGAGGTGAATGCGTCTAGAATCTATTGCCTTTCT +
Preference number: 1 (lower is better)
Translates to: STQVPLCLQLGPESL*LPTEVNASRIYCLS
Trigger: AGAAAGGCAATAGATTCTAGACGCATTCACCTCTGTGGGTAAGCATAGGGACTCTGGGCCCAGCTGTAAACACAGGGGAACCTGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CCA 90 bp ATAAGCTTCTTTCTTCAGACTGTCCACATTCCTGAGCTGGACACCTaGAACCGTGTTGAACTTGTGCTTCTTGAAGTAGGCCTCGTGAAA +
Preference number: 1 (lower is better)
Translates to: ISFFLQTVHIPELDT*NRVELVLLEVGLVK
Trigger: TTTCACGAGGCCTACTTCAAGAAGCACAAGTTCAACACGGTTCCAGGTGTCCAGCTCAGGAATGTGGACAGTCTGAAGAAAGAAGCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp CTCCTTGTACAAGGACCTCCTGAGCACCCAGCCCAGCCCAGGCATGGTCTCCACCATGTGGGCCCCAGCTaGGCCTGTCCATGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: LLVQGPPEHPAQPRHGLHHVGPS*ACPWVG
Trigger: CCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG...GTGGAGACCATGCCTGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGTTCTGGGGCTCCTaGGGCTCCCTCCTCCTTTGG +
Preference number: 2 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFLFWGS*GSLLLW
Trigger: CCAAAGGAGGAGGGAGCCCCAGGAGCCCCAGAACAG...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTGTGCCACCACATCCATaGGTTCCTGGGGGACATGGC +
Preference number: 2 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSVPPHP*VPGGHG
Trigger: GCCATGTCCCCCAGGAACCCATGGATGTGGTGGCAC...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAGCTGGGCCTGTCCATaGGTTGGGCACAGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSSWACP*VGHSSF
Trigger: GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCT...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR CCA 90 bp CTCCTTGTACAAGGACCTCCTGAGCACCCAGCCCAGCCCAGGCATGGTCTCCACTCTGTGTCTGCCCAGTaGCACTCTGCCTCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: LLVQGPPEHPAQPRHGLHSVSAQ*HSASSA
Trigger: AGCAGAAGAGGCAGAGTGCCACTGGGCAGACACAGA...GTGGAGACCATGCCTGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CAA 90 bp ATCCAAGGCCTTCACATTTCACAGCCCTTGCCTGGGCGGTCTCCCTaGCCCGTCCCTGGCAATCACTGCTGCTCCATGTTGTACTCCACC +
Preference number: 2 (lower is better)
Translates to: IQGLHISQPLPGRSP*PVPGNHCCSMLYST
Trigger: GGTGGAGTACAACATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGTGAAATGTGAAGGCCTTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp AGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAAGGAGTGGGTCAGGGCTaGACTCGATGGGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: RNPGPPGSACFQGPQDSQGVGQG*TRWVWG
Trigger: ACCCCACACCCATCGAGTTCAGCCCTGACCCACTCC...TTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp TGTGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCCAGGTACTCTCCTaGCCTTCTCCAACAAGGAAG +
Preference number: 2 (lower is better)
Translates to: CVSMWAPAGPVHGLGTAVSQVLS*PSPTRK
Trigger: CTTCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGA...AACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR GCA 90 bp CTCTCGGCCCCGGCGTTGTTCAGGCATCCGCATCCACATGTCCCAATCCCAGAGTGGGAGTATGCTGGATaGCCCTCAGACCAAACAGTG +
Preference number: 2 (lower is better)
Translates to: LSAPALFRHPHPHVPIPEWEYAG*PSDQTV
Trigger: CACTGTTTGGTCTGAGGGGCATCCAGCATACTCCCA...CTCTGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp TGTGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTCAAAATCCTACAGGATaGAGGGAAGGGCTAGCCAGC +
Preference number: 2 (lower is better)
Translates to: CVSMWAPAGPVHGLGTAVQNPTG*REGLAS
Trigger: GCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG...AACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR CCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGTCAGGAACGGGGTGTTaGAGCAGGGGAACCCTCCCC +
Preference number: 2 (lower is better)
Translates to: QPLPASTKSYRMEGRASQSGTGC*SRGTLP
Trigger: GGGGAGGGTTCCCCTGCTCCAACACCCCGTTCCTGA...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR CCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGGTCTGTGTCAGCATGTaGGCCCCAGCTGGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: QPLPASTKSYRMEGRASQVCVSM*APAGPV
Trigger: GACAGGCCCAGCTGGGGCCCACATGCTGACACAGAC...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR CAA 90 bp GTAGGATCGGGAAACGTCAGGGATGATGCACTCTCGGCCCCGGCGTaGTTCAGGCATCCGCATCCACATGTCCCAATCCCAGAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: VGSGNVRDDALSAPA*FRHPHPHVPIPELF
Trigger: GAAAAGCTCTGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAGTGCATCATCCCTGACGTTTCCCGATCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCAAAACTGTTATCATCTaGGGAGACACCCCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFKTVII*GDTPWA
Trigger: AGCCCAGGGGGTGTCTCCTCAGATGATAACAGTTTT...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp GCCGACGATGCCAAAGTGGTAGGATCGGGAAACGTCAGGGATGATGCACTCTCGCCACTGCTCACCATGTaGGGTCACTTTCCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: ADDAKVVGSGNVRDDALSPLLTM*GHFPSA
Trigger: GGCAGAGGGAAAGTGACCTCACATGGTGAGCAGTGG...CGAGAGTGCATCATCCCTGACGTTTCCCGATCCTACCACTTTGGCATCGTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACGGCCCAGAGTCCCTATaGTTACCCACAGAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHGPESL*LPTEVN
Trigger: ATTCACCTCTGTGGGTAAGCATAGGGACTCTGGGCC...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp CCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTGCCTGGGCGGTCTCCCTTaGCCGTCCCTGGCAATCACT +
Preference number: 2 (lower is better)
Translates to: PSGSGSSSETISTGPDGCLGGLP*PSLAIT
Trigger: AGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAG...GCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp CTCTCGGCCCCGGCGTTGTTCAGGCATCCGCATCCACATGTCCCAATCCCAGAGATTCAAAGGGCAGGATaGGCTGCTAGGGATCGTAAT +
Preference number: 2 (lower is better)
Translates to: LSAPALFRHPHPHVPIPEIQRAG*AARDRN
Trigger: ATTACGATCCCTAGCAGCTCATCCTGCCCTTTGAAT...CTCTGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCGGCACAGCAGTTTCCTaGGTAAGAGCCAGCCCCACC +
Preference number: 2 (lower is better)
Translates to: IPAQKEIQALQVRPVFKAGTAVS*VRASPT
Trigger: GGTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCC...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR TCA 90 bp TCAGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTCAGCCACAGGCACATTaGGGACCTTGTTGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: SGQHSSPKRNPGPPGSACQPQAH*GPCCLG
Trigger: TCCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTG...ACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp TCAGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTCCTCCTGGAGGTAGATaGCCTAAGCACCCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: SGQHSSPKRNPGPPGSACPPGGR*PKHPPV
Trigger: AACAGGAGGGTGCTTAGGTCATCTACCTCCAGGAGG...ACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACGACTGTCCACATTCCTaGGCTGGACACCTGGAACCG +
Preference number: 2 (lower is better)
Translates to: HLQNPTGWREGLASLGVHDCPHS*AGHLEP
Trigger: CGGTTCCAGGTGTCCAGCTCAGGAATGTGGACAGTC...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGGTTCAGCTCTGTGTCTaGCCAGTGGCACTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: QPLPASTKSYRMEGRASQVQLCV*PVALCL
Trigger: GAGGCAGAGTGCCACTGGGCAGACACAGAGCTGAAC...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp GCCGACGATGCCAAAGTGGTAGGATCGGGAAACGTCAGGGATGATGCACTCTCGATTGGGTCGGTTCCCTaGAATGACAGCCACAGGCAC +
Preference number: 2 (lower is better)
Translates to: ADDAKVVGSGNVRDDALSIGSVP*NDSHRH
Trigger: GTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAAT...CGAGAGTGCATCATCCCTGACGTTTCCCGATCCTACCACTTTGGCATCGTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp CTCCTTGTACAAGGACCTCCTGAGCACCCAGCCCAGCCCAGGCATGGTCTCCACGCGTCTAGAATCTATTaGCTTTCTGCCCACCTCAAG +
Preference number: 2 (lower is better)
Translates to: LLVQGPPEHPAQPRHGLHASRIY*LSAHLK
Trigger: CTTGAGGTGGGCAGAAAGGCAATAGATTCTAGACGC...GTGGAGACCATGCCTGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp GCCCCGGCGTTGTTCAGGCATCCGCATCCACATGTCCCAATCCCAGAGCTTTTCGTCCCTGGCAATCACTaGTGCTCCATGTTGTACTCC +
Preference number: 2 (lower is better)
Translates to: APALFRHPHPHVPIPELFVPGNH*CSMLYS
Trigger: GGAGTACAACATGGAGCAGCAGTGATTGCCAGGGAC...GAAAAGCTCTGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGCCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGACATCCATGGGTTCCTaGGGGACATGGCCACTGCTC +
Preference number: 2 (lower is better)
Translates to: QPLPASTKSYRMEGRASQTSMGS*GTWPLL
Trigger: GAGCAGTGGCCATGTCCCCCAGGAACCCATGGATGT...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CAA 90 bp AGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTaGCCACGCACATCCAGGTCCCAGATATGGAGGCACTTGGCAAGC +
Preference number: 2 (lower is better)
Translates to: RKWFFFRNNLHRPRW*PRTSRSQIWRHLAS
Trigger: GCTTGCCAAGTGCCTCCATATCTGGGACCTGGATGTGCGTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp ATCTTTCTCCATTCGAATAAAGGCCACGTAGGTGTGGCCCTCTGTGTCTGGCAGGGCACAGCAGTTTCCTaGGTAAGAGCCAGCCCCACC +
Preference number: 2 (lower is better)
Translates to: IFLHSNKGHVGVALCVWQGTAVS*VRASPT
Trigger: GGTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCC...CTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATTCGAATGGAGAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp CTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCTTCTCCAACAAGGACATAGCCCTCAACTTTaGTGCAGAAGCGCCGGCGGC +
Preference number: 2 (lower is better)
Translates to: LLGIVMIPRYSPALLQQGHSPQL*CRSAGG
Trigger: GCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCTATG...TCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp GGCATGGTCTCCACACGGTACAGTAGTGCTGGGTCCTCAGCCGTGTGTTCATACTGGGTGTGGGGTCCTTaGAGCTGCATACACTTCCAT +
Preference number: 2 (lower is better)
Translates to: GMVSTRYSSAGSSAVCSYWVWGP*SCIHFH
Trigger: ATGGAAGTGTATGCAGCTGCAAGGACCCCACACCCA...GTATGAACACACGGCTGAGGACCCAGCACTACTGTACCGTGTGGAGACCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp GGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCAAAATCCTACAGGATaGAGGGAAGGGCTAGCCAGC +
Preference number: 2 (lower is better)
Translates to: GTPTIRKWFFFRNNLHRPQNPTG*REGLAS
Trigger: GCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG...GGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCGAGGACCTTGTTGTCTaGGAGTGGGTCAGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: SQAWKVRVFKGQDELLGIEDLVV*EWVRAE
Trigger: TTCAGCCCTGACCCACTCCCAGACAACAAGGTCCTC...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp GGCATGGTCTCCACACGGTACAGTAGTGCTGGGTCCTCAGCCGTGTGTTCATACCTGATGGGAGTATGCTaGATGCCCCTCAGACCAAAC +
Preference number: 2 (lower is better)
Translates to: GMVSTRYSSAGSSAVCSYLMGVC*MPLRPN
Trigger: GTTTGGTCTGAGGGGCATCCAGCATACTCCCATCAG...GTATGAACACACGGCTGAGGACCCAGCACTACTGTACCGTGTGGAGACCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGGCTGGGTCCAGGTGGTaGAGTCATCATCTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: QPLPASTKSYRMEGRASQAGSRW*SHHLSP
Trigger: TGGAGAAAGATGATGACTTCACCACCTGGACCCAGC...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR GCA 90 bp CTTTTCCGGTGTAGGCCACTTGGGCTCAAGCTCCTCCTTGTACAAGGACCTCCTTGGGGTCCTTGCAGCTaGATACACTTCCATAGCCCT +
Preference number: 2 (lower is better)
Translates to: LFRCRPLGLKLLLVQGPPWGPCS*IHFHSP
Trigger: AGGGCTATGGAAGTGTATGCAGCTGCAAGGACCCCA...AGGAGGTCCTTGTACAAGGAGGAGCTTGAGCCCAAGTGGCCTACACCGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp TCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTGCCACCTCTGCCTCTTCTGCTaGGCTCAATGGCACATCTGT +
Preference number: 2 (lower is better)
Translates to: SGSGSSSETISTGPDGCHLCLFC*AQWHIC
Trigger: ACAGATGTGCCATTGAGCTCAGCAGAAGAGGCAGAG...GTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp ATCTTTCTCCATTCGAATAAAGGCCACGTAGGTGTGGCCCTCTGTGTCTGGCAGGAACCTCAGCCTCACTaGGCAGCCTGTGAACTTCCA +
Preference number: 2 (lower is better)
Translates to: IFLHSNKGHVGVALCVWQEPQPH*AACELP
Trigger: TGGAAGTTCACAGGCTGCTCAGTGAGGCTGAGGTTC...CTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATTCGAATGGAGAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGATTCAAAGGGCAGGATaGGCTGCTAGGGATCGTAAT +
Preference number: 2 (lower is better)
Translates to: QPLPASTKSYRMEGRASQIQRAG*AARDRN
Trigger: ATTACGATCCCTAGCAGCTCATCCTGCCCTTTGAAT...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR GCA 90 bp CAGCATCCTGGGGAGCCCAGGGATAGGTTAGGGTCACTTCATCACCCCTCAACTAATCTATTGCCTTTCTaGCCACCTCAAGAGTTCCTC +
Preference number: 2 (lower is better)
Translates to: QHPGEPRDRLGSLHHPSTNLLPF*PPQEFL
Trigger: GAGGAACTCTTGAGGTGGGCAGAAAGGCAATAGATT...AGTTGAGGGGTGATGAAGTGACCCTAACCTATCCCTGGGCTCCCCAGGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp GGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCATTCTGAGCCAGGCCTaGAAAGTGAGGGTATTCAAA +
Preference number: 2 (lower is better)
Translates to: GTPTIRKWFFFRNNLHRPILSQA*KVRVFK
Trigger: TTTGAATACCCTCACTTTCCAGGCCTGGCTCAGAAT...GGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGGGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR TCA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACGCTTACCCACAGAGGTaGATGCGTCTAGAATCTATT +
Preference number: 2 (lower is better)
Translates to: HLQNPTGWREGLASLGVHAYPQR*MRLESI
Trigger: AATAGATTCTAGACGCATTCACCTCTGTGGGTAAGC...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CCA 90 bp ATCTTTCTCCATTCGAATAAAGGCCACGTAGGTGTGGCCCTCTGTGTCTGGCAGGTGTGTTCATACCCCTaGTCATTCCAGGCAGAGATG +
Preference number: 2 (lower is better)
Translates to: IFLHSNKGHVGVALCVWQVCSYP*SFQAEM
Trigger: CATCTCTGCCTGGAATGACCAGGGGTATGAACACAC...CTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATTCGAATGGAGAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 72 bp CCTGGGCGGTCTCCCTTGCCCGTCCCTGGCAATCACTaGTGCTCCATGTTGTACTCCACCCGAGGCACCCCC +
Preference number: 3 (lower is better)
Translates to: PGRSPLPVPGNH*CSMLYSTRGTP
Trigger: GGGGGTGCCTCGGGTGGAGTACAACATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CCA 72 bp ACAGCCCTTGCCTGGGCGGTCTCCCTTGCCCGTCCCTaGCAATCACTGCTGCTCCATGTTGTACTCCACCCG +
Preference number: 3 (lower is better)
Translates to: TALAWAVSLARP*QSLLLHVVLHP
Trigger: CGGGTGGAGTACAACATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CCA 72 bp CTGTGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATaGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: LCQHVGPSWACP*VGHSSFLSKSQ
Trigger: CTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR CAA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCTCAGGAACGGGGTGTaGGAGCAGGGGAACCCTCCC +
Preference number: 3 (lower is better)
Translates to: QPLPASTKSYRMEGRASQLRNGV*EQGNPP
Trigger: GGGAGGGTTCCCCTGCTCCAACACCCCGTTCCTGAG...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR CAA 90 bp CTCCTTGTACAAGGACCTCCTGAGCACCCAGCCCAGCCCAGGCATGGTCTCCACACATTGAGGACCTTGTaGTCTGGGAGTGGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: LLVQGPPEHPAQPRHGLHTLRTL*SGSGSG
Trigger: CCCTGACCCACTCCCAGACAACAAGGTCCTCAATGT...GTGGAGACCATGCCTGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR TCA 72 bp CGATGCCAAAGTGGTAGGATCGGGAAACGTCAGGGATaGTGCACTCTCGGCCCCGGCGTTGTTCAGGCATCC +
Preference number: 3 (lower is better)
Translates to: RCQSGRIGKRQG*CTLGPGVVQAS
Trigger: GGATGCCTGAACAACGCCGGGGCCGAGAGTGCATCATCCCTGACGTTTCCCGATCCTACCACTTTGGCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 72 bp CCTTGCAGCTGCATACACTTCCATAGCCCTCAACTTTaGTGCAGAAGCGCCGGCGGCGACGGTTCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: PCSCIHFHSPQL*CRSAGGDGSAL
Trigger: CAGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCTATGGAAGTGTATGCAGCTGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CAA 90 bp CCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGACAGCCACAGGCACATaGAGGACCTTGTTGTCTGGG +
Preference number: 3 (lower is better)
Translates to: PSWACPWVGHSSFLSKSQTATGT*RTLLSG
Trigger: CCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTGT...CTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CAA 90 bp CTTTTCCGGTGTAGGCCACTTGGGCTCAAGCTCCTCCTTGTACAAGGACCTCCTCACATTTCACAGCCCTaGCCTGGGCGGTCTCCCTTG +
Preference number: 3 (lower is better)
Translates to: LFRCRPLGLKLLLVQGPPHISQP*PGRSPL
Trigger: CAAGGGAGACCGCCCAGGCAAGGGCTGTGAAATGTG...AGGAGGTCCTTGTACAAGGAGGAGCTTGAGCCCAAGTGGCCTACACCGGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 72 bp TGCAGCTGCATACACTTCCATAGCCCTCAACTTTGCTaGAGAAGCGCCGGCGGCGACGGTTCAGCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: CSCIHFHSPQLC*RSAGGDGSALC
Trigger: ACACAGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCTATGGAAGTGTATGCAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 72 bp TTCACATTTCACAGCCCTTGCCTGGGCGGTCTCCCTTaGCCGTCCCTGGCAATCACTGCTGCTCCATGTTGT +
Preference number: 3 (lower is better)
Translates to: FTFHSPCLGGLP*PSLAITAAPCC
Trigger: ACAACATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGTGAAATGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CAA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACAGGGGAACCCTCCCCTaGGAGTTAGTAATTAAGTCT +
Preference number: 3 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHRGTLP*ELVIKS
Trigger: AGACTTAATTACTAACTCCAAGGGGAGGGTTCCCCT...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR-3UTR CAA 90 bp AGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAAGGCACATTGAGGACCTaGTTGTCTGGGAGTGGGTCA +
Preference number: 3 (lower is better)
Translates to: RNPGPPGSACFQGPQDSQGTLRT*LSGSGS
Trigger: TGACCCACTCCCAGACAACAAGGTCCTCAATGTGCC...TTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 72 bp TCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTaGCACGCACATCCAGGTCCCAGATATGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: SSSETISTGPDG*HAHPGPRYGGT
Trigger: AGTGCCTCCATATCTGGGACCTGGATGTGCGTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 72 bp ATGGCCACTGCTCACCATGTGAGGTCACTTTCCCTCTaGCCACCTCTGCAATCCAAGGCCTTCACATTTCAC +
Preference number: 3 (lower is better)
Translates to: MATAHHVRSLSL*PPLQSKAFTFH
Trigger: GTGAAATGTGAAGGCCTTGGATTGCAGAGGTGGGCAGAGGGAAAGTGACCTCACATGGTGAGCAGTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CAA 90 bp CAGCATCCTGGGGAGCCCAGGGATAGGTTAGGGTCACTTCATCACCCCTCAACTAGGGGAACCCTCCCCTaGGAGTTAGTAATTAAGTCT +
Preference number: 3 (lower is better)
Translates to: QHPGEPRDRLGSLHHPSTRGTLP*ELVIKS
Trigger: AGACTTAATTACTAACTCCAAGGGGAGGGTTCCCCT...AGTTGAGGGGTGATGAAGTGACCCTAACCTATCCCTGGGCTCCCCAGGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CAA 90 bp ATCTTTCTCCATTCGAATAAAGGCCACGTAGGTGTGGCCCTCTGTGTCTGGCAGGACACGCGGGCATTCTaGATGCTGATGGGAGTATGC +
Preference number: 3 (lower is better)
Translates to: IFLHSNKGHVGVALCVWQDTRAF*MLMGVC
Trigger: GCATACTCCCATCAGCATCAAGAATGCCCGCGTGTC...CTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATTCGAATGGAGAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR-3UTR CAA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCAGAACCACAGCAAACTaGGCCTCCGGAAACAGGTTG +
Preference number: 3 (lower is better)
Translates to: IPAQKEIQALQVRPVFKARTTAN*ASGNRL
Trigger: CAACCTGTTTCCGGAGGCCAAGTTTGCTGTGGTTCT...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR TCA 72 bp CCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATaGGCTGCTAGGGATCGTAATGATTCCCAGGTACTC +
Preference number: 3 (lower is better)
Translates to: PGLESEGIQRAG*AARDRNDSQVL
Trigger: GAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR GCA 72 bp CCAGGCTTACCTGTACAGGTAATTGGGTCGGTTCCCTaGAATGACAGCCACAGGCACATTGAGGACCTTGTT +
Preference number: 3 (lower is better)
Translates to: PGLPVQVIGSVP*NDSHRHIEDLV
Trigger: AACAAGGTCCTCAATGTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CCA 72 bp TCGAATAAAGGCCACGTAGGTGTGGCCCTCTGTGTCTaGCAGGAAAGAGTCTTCACAAGGGTTCTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: SNKGHVGVALCV*QERVFTRVLAV
Trigger: CACAGCAAGAACCCTTGTGAAGACTCTTTCCTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 72 bp TGCTTACCCACAGAGGTGAATGCGTCTAGAATCTATTaGCTTTCTGCCCACCTCAAGAGTTCCTCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: CLPTEVNASRIY*LSAHLKSSSWR
Trigger: CCTCCAGGAGGAACTCTTGAGGTGGGCAGAAAGGCAATAGATTCTAGACGCATTCACCTCTGTGGGTAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR GCA 72 bp GTTCCCCTGTGTTTACAGCTGGGCCCAGAGTCCCTATaGTTACCCACAGAGGTGAATGCGTCTAGAATCTAT +
Preference number: 3 (lower is better)
Translates to: VPLCLQLGPESL*LPTEVNASRIY
Trigger: ATAGATTCTAGACGCATTCACCTCTGTGGGTAAGCATAGGGACTCTGGGCCCAGCTGTAAACACAGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACTGGATGCCCCGGCCCTaGTCCCGGGCCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHWMPRP*SRASSS
Trigger: GGAGGATGAGGCCCGGGAGCAGGGCCGGGGCATCCA...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp ATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCGCAGGGTGTCTGTGTCAGCATGTaGGCCCCAGCTGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: MEGRASQPGGTQYPAPQGVCVSM*APAGPV
Trigger: GACAGGCCCAGCTGGGGCCCACATGCTGACACAGAC...ACCCTGCGGGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCTGTACAAGGACCTCCTaGGCACCCAGCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PTGWREGLASLGVHSTQPCTRTS*APSPAQ
Trigger: CTGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACA...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGGTCTGTGTCAGCATGTaGGCCCCAGCTGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: QHVGPSWACPWVGHSSFLVCVSM*APAGPV
Trigger: GACAGGCCCAGCTGGGGCCCACATGCTGACACAGAC...CAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GGCGGCGACGGTTCAGCTCTGTGTCTGCCCAGTGGCACTCTGCCTCTTCTGCTGGGCTTCGAGGCCCACTaGTTCTGGGAGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GGDGSALCLPSGTLPLLLGFEAH*FWEQCQ
Trigger: CTGGCACTGCTCCCAGAACCAGTGGGCCTCGAAGCC...CAGCAGAAGAGGCAGAGTGCCACTGGGCAGACACAGAGCTGAACCGTCGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCTTCACAGCCCTTGCCTaGGCGGTCTCCCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: PTGWREGLASLGVHSTQPFTALA*AVSLAR
Trigger: ACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGTGAA...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAGAGAGGGCCAGGACTaGGGTGGATGTGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSREGQD*GGCGSH
Trigger: GTGGCTGCCACATCCACCTCAGTCCTGGCCCTCTCT...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp GGCGGCGACGGTTCAGCTCTGTGTCTGCCCAGTGGCACTCTGCCTCTTCTGCTGGCTGGTGACCTTGAATaGGGGCATCGAGGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: GGDGSALCLPSGTLPLLLAGDLE*GHRGSA
Trigger: CGCACTGCCTCGATGCCCTCATTCAAGGTCACCAGC...CAGCAGAAGAGGCAGAGTGCCACTGGGCAGACACAGAGCTGAACCGTCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCGGGGACCACTGCCTCTaGGCCGTGGGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SQAWKVRVFKGQDELLGIGDHCL*AVGAPG
Trigger: GCCTGGAGCCCCCACGGCGCAGAGGCAGTGGTCCCC...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp GGGTATAGCCCATTCCCAGGCTTACCTGTACAGGTAATTGGGTCGGTTCCCTGCGGGGACCACTGCCTCTaGGCCGTGGGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GYSPFPGLPVQVIGSVPCGDHCL*AVGAPG
Trigger: GCCTGGAGCCCCCACGGCGCAGAGGCAGTGGTCCCC...GCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGGGAATGGGCTATACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCACAGGCCCCGATGGTTaGCACGCACATCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFTGPDG*HAHPGP
Trigger: GGGACCTGGATGTGCGTGGCAACCATCGGGGCCTGT...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp CTCTCGGCCCCGGCGTTGTTCAGGCATCCGCATCCACATGTCCCAATCCCAGAGACAGGCCCCGATGGTTaGCACGCACATCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSAPALFRHPHPHVPIPETGPDG*HAHPGP
Trigger: GGGACCTGGATGTGCGTGGCAACCATCGGGGCCTGT...CTCTGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACGCAGCTGGGACAGCCTaGCAGACACCAGCACCACCG +
Preference number: 4 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHAAGTA*QTPAPP
Trigger: CGGTGGTGCTGGTGTCTGGCAGGCTGTCCCAGCTGC...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTCTGGGCGGTCTCCCTTaGCCGTCCCTGGCAATCACT +
Preference number: 4 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSLGGLP*PSLAIT
Trigger: AGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAG...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CTGCAGAAGCGCCGGCGGCGACGGTTCAGCTCTGTGTCTGCCCAGTGGCACTCTCATCCTCCAGCACCGTaGTGCCATCCACTGCCACAT +
Preference number: 4 (lower is better)
Translates to: LQKRRRRRFSSVSAQWHSHPPAP*CHPLPH
Trigger: ATGTGGCAGTGGATGGCACCACGGTGCTGGAGGATG...AGAGTGCCACTGGGCAGACACAGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp ATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCGCAGGGTTTGAGGACAATGACATaGATGCCCCGGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MEGRASQPGGTQYPAPQGLRTMT*MPRPCS
Trigger: GGAGCAGGGCCGGGGCATCCATGTCATTGTCCTCAA...ACCCTGCGGGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CTGCAGAAGCGCCGGCGGCGACGGTTCAGCTCTGTGTCTGCCCAGTGGCACTCTAGCCCAGCCCAGGCATaGTCTCCACACGGTACAGTA +
Preference number: 4 (lower is better)
Translates to: LQKRRRRRFSSVSAQWHSSPAQA*SPHGTV
Trigger: TACTGTACCGTGTGGAGACCATGCCTGGGCTGGGCT...AGAGTGCCACTGGGCAGACACAGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACCATGTGGGCCCCAGCTaGGCCTGTCCATGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHHVGPS*ACPWVG
Trigger: CCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCTCAAGGCGAGGCAGCTaGGACAGCCTGCCAGACACC +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFSRRGS*DSLPDT
Trigger: GGTGTCTGGCAGGCTGTCCCAGCTGCCTCGCCTTGA...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGGTCCTGGCCAGCCCATaGCTTCAGGAATGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: QHVGPSWACPWVGHSSFLVLASP*LQEWLR
Trigger: CCTAAGCCATTCCTGAAGTCATGGGCTGGCCAGGAC...CAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371984.8
CDS-3UTR TCA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCCACTGCTCACCATGTaGGGTCACTTTCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PTGWREGLASLGVHSTQPPLLTM*GHFPSA
Trigger: GGCAGAGGGAAAGTGACCTCACATGGTGAGCAGTGG...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp AGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTGGATGCCCCGGCCCTaGTCCCGGGCCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: RAAFQPKKKSRPSRFGLFWMPRP*SRASSS
Trigger: GGAGGATGAGGCCCGGGAGCAGGGCCGGGGCATCCA...AAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp GGCGGCGACGGTTCAGCTCTGTGTCTGCCCAGTGGCACTCTGCCTCTTCTGCTGGTTCAGCTCTGTGTCTaGCCAGTGGCACTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGDGSALCLPSGTLPLLLVQLCV*PVALCL
Trigger: GAGGCAGAGTGCCACTGGGCAGACACAGAGCTGAAC...CAGCAGAAGAGGCAGAGTGCCACTGGGCAGACACAGAGCTGAACCGTCGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CTCTCGGCCCCGGCGTTGTTCAGGCATCCGCATCCACATGTCCCAATCCCAGAGCGTTTTGCCATCACGTaGCCCGTGGCCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSAPALFRHPHPHVPIPERFAIT*PVAWLR
Trigger: CCTCAACCAGGCCACGGGCCACGTGATGGCAAAACG...CTCTGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CTCTCGGCCCCGGCGTTGTTCAGGCATCCGCATCCACATGTCCCAATCCCAGAGGTGCCACCACATCCATaGGTTCCTGGGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: LSAPALFRHPHPHVPIPEVPPHP*VPGGHG
Trigger: GCCATGTCCCCCAGGAACCCATGGATGTGGTGGCAC...CTCTGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCTTCATTGGCTTCACTaGTGGCTCGCCGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PTGWREGLASLGVHSTQPLHWLH*WLAECP
Trigger: TGGACACTCGGCGAGCCATCAGTGAAGCCAATGAAG...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCGACTGTCCACATTCCTaGGCTGGACACCTGGAACCG +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFDCPHS*AGHLEP
Trigger: CGGTTCCAGGTGTCCAGCTCAGGAATGTGGACAGTC...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGGAACCTCAGCCTCACTaGGCAGCCTGTGAACTTCCA +
Preference number: 4 (lower is better)
Translates to: QHVGPSWACPWVGHSSFLEPQPH*AACELP
Trigger: TGGAAGTTCACAGGCTGCTCAGTGAGGCTGAGGTTC...CAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCCTCCTGGAGGTAGATaGCCTAAGCACCCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PTGWREGLASLGVHSTQPPPGGR*PKHPPV
Trigger: AACAGGAGGGTGCTTAGGTCATCTACCTCCAGGAGG...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp CTGCAGAAGCGCCGGCGGCGACGGTTCAGCTCTGTGTCTGCCCAGTGGCACTCTTGGGTGTGGGGTCCTTaGAGCTGCATACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: LQKRRRRRFSSVSAQWHSWVWGP*SCIHFH
Trigger: ATGGAAGTGTATGCAGCTGCAAGGACCCCACACCCA...AGAGTGCCACTGGGCAGACACAGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp CTGCAGAAGCGCCGGCGGCGACGGTTCAGCTCTGTGTCTGCCCAGTGGCACTCTCCTCAGACCAAACAGTaGCACCACATCCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: LQKRRRRRFSSVSAQWHSPQTKQ*HHIHGF
Trigger: GAACCCATGGATGTGGTGGCACTGTTTGGTCTGAGG...AGAGTGCCACTGGGCAGACACAGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp ACAGCCCTTGCCTGGGCGGTCTCCCTTGCCCGTCCCTGGCAATCACTGCTGCTCACGTTGACCAGTCATTaGAGCAGCCTCACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TALAWAVSLARPWQSLLLTLTSH*SSLTSS
Trigger: ACTGCTGGTGAGGCTGCTGCAATGACTGGTCAACGT...GAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CCTGGGGAGCCCAGGGATAGGTTAGGGTCACTTCATCACCCCTCAACTCAGGTTCATGTGGGCCCCAGCTaGGCCTGTCCATGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PGEPRDRLGSLHHPSTQVHVGPS*ACPWVG
Trigger: CCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG...AACCTGAGTTGAGGGGTGATGAAGTGACCCTAACCTATCCCTGGGCTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CTCCTTGTACAAGGACCTCCTGAGCACCCAGCCCAGCCCAGGCATGGTCTCCACGCACCACCGACCGGCTaGACAGTGTCTCTATTGGCA +
Preference number: 4 (lower is better)
Translates to: LLVQGPPEHPAQPRHGLHAPPTG*TVSLLA
Trigger: TGCCAATAGAGACACTGTCCAGCCGGTCGGTGGTGC...GTGGAGACCATGCCTGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTTCCCTTGCCCGTCCCTaGCAATCACTGCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSSLARP*QSLLLH
Trigger: ATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGA...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGCTCTGCCTCTTCTGCTaGGCTCAATGGCACATCTGT +
Preference number: 4 (lower is better)
Translates to: QHVGPSWACPWVGHSSFLLCLFC*AQWHIC
Trigger: ACAGATGTGCCATTGAGCTCAGCAGAAGAGGCAGAG...CAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp GGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCGGAGTGGGTCAGGGCTaGACTCGATGGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GTPTIRKWFFFRNNLHRPGVGQG*TRWVWG
Trigger: ACCCCACACCCATCGAGTTCAGCCCTGACCCACTCC...GGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGGGGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCTGTACAAGGACCTCCTaGGCACCCAGCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTCTRTS*APSPAQ
Trigger: CTGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACA...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACGGGAAACGTCAGGGATaGTGCACTCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: HLQNPTGWREGLASLGVHGKRQG*CTLGPG
Trigger: GCCGGGGCCGAGAGTGCATCATCCCTGACGTTTCCC...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCAGCCCTCAACTTTGCTaGAGAAGCGCCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTSPQLC*RSAGGD
Trigger: GTCGCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCT...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp TGTGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTATTGGGTCGGTTCCCTaGAATGACAGCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: CVSMWAPAGPVHGLGTAVIGSVP*NDSHRH
Trigger: GTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAAT...AACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp ACAGCCCTTGCCTGGGCGGTCTCCCTTGCCCGTCCCTGGCAATCACTGCTGCTCCTTCACAAGGGTTCTTaGTGTGGTCCAGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: TALAWAVSLARPWQSLLLLHKGS*CGPEPQ
Trigger: CTGAGGTTCTGGACCACAGCAAGAACCCTTGTGAAG...GAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp CAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGTGGTTCTGGGAGCAGTaGCAGGATGATGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: QHVGPSWACPWVGHSSFLWFWEQ*QDDVTF
Trigger: GAAGGTCACATCATCCTGGCACTGCTCCCAGAACCA...CAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGGGGTCACCAATGTCCTaGCCAGCCCATGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSWACPWVGHSSFLSKSQGSPMS*PAHDFR
Trigger: CCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCC...CTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCGTGGCCCTCTGTGTCTaGCAGGAAAGAGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: PTGWREGLASLGVHSTQPVALCV*QERVFT
Trigger: TGTGAAGACTCTTTCCTGCCAGACACAGAGGGCCAC...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAGATATGGAGGCACTTaGCAAGCTGGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSRYGGT*QAGSRW
Trigger: CCACCTGGACCCAGCTTGCCAAGTGCCTCCATATCT...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACGGCTCCCTCCTCCTTTaGGGGTGGCTCCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHGSLLL*GWLQEN
Trigger: ATTTTCCTGGAGCCACCCCCAAAGGAGGAGGGAGCC...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCTGTTCTGGGGCTCCTaGGGCTCCCTCCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTLFWGS*GSLLLW
Trigger: CCAAAGGAGGAGGGAGCCCCAGGAGCCCCAGAACAG...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCAAAATCCTACAGGATaGAGGGAAGGGCTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PTGWREGLASLGVHSTQPQNPTG*REGLAS
Trigger: GCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACGGCCTGTCCATGGGTTaGGCACAGCAGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHGLSMG*AQQFPE
Trigger: CTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCC...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAAATCGAGGCAGTGCGCTaGCTGTTGGAGGAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RNPGPPGSACFQGPQDSQIEAVR*LLEERG
Trigger: CCCCCGCTCCTCCAACAGCCAGCGCACTGCCTCGAT...TTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCCCTGTGTTTACAGCTaGGCCCAGAGTCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFPCVYS*AQSPYA
Trigger: AGCATAGGGACTCTGGGCCCAGCTGTAAACACAGGG...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CAA 72 bp CTTCACATTTCACAGCCCTTGCCTGGGCGGTCTCCCTaGCCCGTCCCTGGCAATCACTGCTGCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: LHISQPLPGRSP*PVPGNHCCSML
Trigger: CAACATGGAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGTGAAATGTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CAA 72 bp TTTTCCGGTGTAGGCCACTTGGGCTCAAGCTCCTCCTaGTACAAGGACCTCCTGAGCACCCAGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSGVGHLGSSSS*YKDLLSTQPSP
Trigger: TGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACAAGGAGGAGCTTGAGCCCAAGTGGCCTACACCGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CAA 72 bp GGAAACGTCAGGGATGATGCACTCTCGGCCCCGGCGTaGTTCAGGCATCCGCATCCACATGTCCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: GNVRDDALSAPA*FRHPHPHVPIP
Trigger: TGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAGTGCATCATCCCTGACGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTCTGCCTCTTCTGCTaGGCTCAATGGCACATCTGT +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFLCLFC*AQWHIC
Trigger: ACAGATGTGCCATTGAGCTCAGCAGAAGAGGCAGAG...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCGGCACAGCAGTTTCCTaGGTAAGAGCCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTGTAVS*VRASPT
Trigger: GGTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCC...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACAGCAGTCAATATAGCCTaGCAGGCGGGAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTAVNIA*QAGAQA
Trigger: GGCCTGGGCTCCCGCCTGTCAGGCTATATTGACTGC...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp AGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTAGCCCTCAACTTTGCTaGAGAAGCGCCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: RAAFQPKKKSRPSRFGLFSPQLC*RSAGGD
Trigger: GTCGCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCT...AAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp GCCGACGATGCCAAAGTGGTAGGATCGGGAAACGTCAGGGATGATGCACTCTCGCATAGCCCTCAACTTTaGTGCAGAAGCGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: ADDAKVVGSGNVRDDALSHSPQL*CRSAGG
Trigger: GCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCTATG...CGAGAGTGCATCATCCCTGACGTTTCCCGATCCTACCACTTTGGCATCGTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCCTCAGACCAAACAGTaGCACCACATCCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFPQTKQ*HHIHGF
Trigger: GAACCCATGGATGTGGTGGCACTGTTTGGTCTGAGG...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp ATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCGCAGGGTATCATAGTCTTGCTCTaGCTCTGGGTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: MEGRASQPGGTQYPAPQGIIVLL*LWVFIG
Trigger: GCCAATGAAGACCCAGAGCCAGAGCAAGACTATGAT...ACCCTGCGGGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGGAGGACCTTGTTGTCTaGGAGTGGGTCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PSWACPWVGHSSFLSKSQEDLVV*EWVRAE
Trigger: TTCAGCCCTGACCCACTCCCAGACAACAAGGTCCTC...CTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCGTGCCACCACATCCATaGGTTCCTCATAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFVPPHP*VPHSSR
Trigger: ACGGCTACTATGAGGAACCCATGGATGTGGTGGCAC...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371984.8
CDS-3UTR CCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGATGGGAGTATGCTaGATGCCCCTCAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFLMGVC*MPLRPN
Trigger: GTTTGGTCTGAGGGGCATCCAGCATACTCCCATCAG...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACCTCCACAGGCCCCGATaGTTGCCACGCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: HLQNPTGWREGLASLGVHLHRPR*LPRTSR
Trigger: CCTGGATGTGCGTGGCAACCATCGGGGCCTGTGGAG...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TCAGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTGTCTCATGTCTGTTCTaGGGCTCCTGGGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SGQHSSPKRNPGPPGSACVSCLF*GSWGSL
Trigger: GAGGGAGCCCCAGGAGCCCCAGAACAGACATGAGAC...ACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTGCCACTGGCCCCCAGCGAGCTaGATGAACAGGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: SGSGSSSETISTGPDGCHWPPAS*MNRAHL
Trigger: CAGGTGGGCCCTGTTCATCCAGCTCGCTGGGGGCCA...GTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CTCCTTGTACAAGGACCTCCTGAGCACCCAGCCCAGCCCAGGCATGGTCTCCACCTCATCCTCATGAGGTaGGTACGTGTCAAACACACG +
Preference number: 4 (lower is better)
Translates to: LLVQGPPEHPAQPRHGLHLILMR*VRVKHT
Trigger: CGTGTGTTTGACACGTACTCACCTCATGAGGATGAG...GTGGAGACCATGCCTGGGCTGGGCTGGGTGCTCAGGAGGTCCTTGTACAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp TCAGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTCGGGCGCTACCATGTTaGGGAATAGCACCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SGQHSSPKRNPGPPGSACRALPC*GIAPWP
Trigger: AGGCCATGGTGCTATTCCTCAACATGGTAGCGCCCG...ACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCGGAGTGGGTCAGGGCTaGACTCGATGGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGGVGQG*TRWVWG
Trigger: ACCCCACACCCATCGAGTTCAGCCCTGACCCACTCC...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCTTCTCCAACAAGGAGGGAAACGTCAGGGATaGTGCACTCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LLGIVMIPRYSPALLQQGGKRQG*CTLGPG
Trigger: GCCGGGGCCGAGAGTGCATCATCCCTGACGTTTCCC...TCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAGTAGCCATTCATGTTaGGGCCGACGATGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSSSHSC*GRRCQS
Trigger: ACTTTGGCATCGTCGGCCTCAACATGAATGGCTACT...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCATTCAAAGGGCAGGATaGGCTGCTAGGGATCGTAAT +
Preference number: 4 (lower is better)
Translates to: PTGWREGLASLGVHSTQPIQRAG*AARDRN
Trigger: ATTACGATCCCTAGCAGCTCATCCTGCCCTTTGAAT...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCAGGAGCGGGGGACGTTaGCCAGTCATTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IPAQKEIQALQVRPVFKARSGGR*PVIAAA
Trigger: GGCTGCTGCAATGACTGGTCAACGTCCCCCGCTCCT...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTTCACAAGGGTTCTTaGTGTGGTCCAGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFLHKGS*CGPEPQ
Trigger: CTGAGGTTCTGGACCACAGCAAGAACCCTTGTGAAG...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCGGGTCACCAATGTCCTaGCCAGCCCATGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: GTPTIRKWFFFRNNLHRPGSPMS*PAHDFR
Trigger: CCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCC...GGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGGGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTGTCTTGCTCTGGCTCTaGGTCTTCATTGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSVLLWL*VFIGFT
Trigger: AGTGAAGCCAATGAAGACCCAGAGCCAGAGCAAGAC...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCGTGTGTTCATACCCCTaGTCATTCCAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFVCSYP*SFQAEM
Trigger: CATCTCTGCCTGGAATGACCAGGGGTATGAACACAC...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTGTTCTGGGGCTCCTaGGGCTCCCTCCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: IPAQKEIQALQVRPVFKALFWGS*GSLLLW
Trigger: CCAAAGGAGGAGGGAGCCCCAGGAGCCCCAGAACAG...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCGTCTCATGTCTGTTCTaGGGCTCCTGGGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SQAWKVRVFKGQDELLGIVSCLF*GSWGSL
Trigger: GAGGGAGCCCCAGGAGCCCCAGAACAGACATGAGAC...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCTCAGGAACGGGGTGTTaGAGCAGGGGAACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGSGTGC*SRGTLP
Trigger: GGGGAGGGTTCCCCTGCTCCAACACCCCGTTCCTGA...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCTCAGGAACGGGGTGTTaGAGCAGGGGAACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KGQDELLGIVMIPRYSPASGTGC*SRGTLP
Trigger: GGGGAGGGTTCCCCTGCTCCAACACCCCGTTCCTGA...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCAGCTGGGCCTGTCCATaGGTTGGGCACAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTSWACP*VGHSSF
Trigger: GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCT...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
3UTR CAA 72 bp TTGGGTCGGTTCCCTGCAATGACAGCCACAGGCACATaGAGGACCTTGTTGTCTGGGAGTGGGTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGRFPAMTATGT*RTLLSGSGSGL
Trigger: CAGCCCTGACCCACTCCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCGGGCGCTACCATGTTaGGGAATAGCACCATGGCCT +
Preference number: 4 (lower is better)
Translates to: QPLPASTKSYRMEGRASQRALPC*GIAPWP
Trigger: AGGCCATGGTGCTATTCCTCAACATGGTAGCGCCCG...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGCCTTGGCTGTGTCCTTaGGGTGGAAGGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LPASTKSYRMEGRASQPGPWLCP*GGRSPH
Trigger: ATGAGGGCTCCTTCCACCTCAAGGACACAGCCAAGG...CCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371984.8
CDS-3UTR TCA 90 bp GCCGACGATGCCAAAGTGGTAGGATCGGGAAACGTCAGGGATGATGCACTCTCGCAGCCACAGGCACATTaGGGACCTTGTTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ADDAKVVGSGNVRDDALSQPQAH*GPCCLG
Trigger: TCCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTG...CGAGAGTGCATCATCCCTGACGTTTCCCGATCCTACCACTTTGGCATCGTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp ATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCGCAGGGTCTGCCACATATACTTTaGTGCGACTTGAATACACCT +
Preference number: 4 (lower is better)
Translates to: MEGRASQPGGTQYPAPQGLPHIL*CDLNTP
Trigger: AGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAG...ACCCTGCGGGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp TCAGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTGTCAAACACACGTTTTaGCATCACGTGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SGQHSSPKRNPGPPGSACVKHTF*HHVARG
Trigger: GCCACGGGCCACGTGATGGCAAAACGTGTGTTTGAC...ACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACAGTTCAGCTCTGTGTCTaGCCAGTGGCACTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTVQLCV*PVALCL
Trigger: GAGGCAGAGTGCCACTGGGCAGACACAGAGCTGAAC...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCATAGCCCTCAACTTTaGTGCAGAAGCGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGHSPQL*CRSAGG
Trigger: GCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCTATG...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp TCACTGAGTAGGGGGAAGCCGGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCTGGGGTCCTTGCAGCTaGATACACTTCCATAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLSRGKPGPPPSGSGSSSWGPCS*IHFHSP
Trigger: AGGGCTATGGAAGTGTATGCAGCTGCAAGGACCCCA...GGAAGAAGAACCACTTCCTGATGGTGGGGGTCCCGGCTTCCCCCTACTCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCTCGTCCATACCGGATTaGCGGGTCACCAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTSSIPD*RVTNVL
Trigger: CAGGACATTGGTGACCCGCCAATCCGGTATGGACGA...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TCAGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTCGTCCATACCGGATTaGCGGGTCACCAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SGQHSSPKRNPGPPGSACSSIPD*RVTNVL
Trigger: CAGGACATTGGTGACCCGCCAATCCGGTATGGACGA...ACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACGTCTTGCTCTGGCTCTaGGTCTTCATTGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHVLLWL*VFIGFT
Trigger: AGTGAAGCCAATGAAGACCCAGAGCCAGAGCAAGAC...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCACGTGGCCCGTGGCCTaGTTGAGGACAATGACATGG +
Preference number: 4 (lower is better)
Translates to: SQAWKVRVFKGQDELLGITWPVA*LRTMTW
Trigger: CCATGTCATTGTCCTCAACCAGGCCACGGGCCACGT...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GGGTATAGCCCATTCCCAGGCTTACCTGTACAGGTAATTGGGTCGGTTCCCTGCACGTGGCCCGTGGCCTaGTTGAGGACAATGACATGG +
Preference number: 4 (lower is better)
Translates to: GYSPFPGLPVQVIGSVPCTWPVA*LRTMTW
Trigger: CCATGTCATTGTCCTCAACCAGGCCACGGGCCACGT...GCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGGGAATGGGCTATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCGTTTTGCCATCACGTaGCCCGTGGCCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGRFAIT*PVAWLR
Trigger: CCTCAACCAGGCCACGGGCCACGTGATGGCAAAACG...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GCCGACGATGCCAAAGTGGTAGGATCGGGAAACGTCAGGGATGATGCACTCTCGTCTGTGTCTGCCCAGTaGCACTCTGCCTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ADDAKVVGSGNVRDDALSSVSAQ*HSASSA
Trigger: AGCAGAAGAGGCAGAGTGCCACTGGGCAGACACAGA...CGAGAGTGCATCATCCCTGACGTTTCCCGATCCTACCACTTTGGCATCGTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACAAGCCCAGCCCAGGCATaGTCTCCACACGGTACAGTA +
Preference number: 4 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTSPAQA*SPHGTV
Trigger: TACTGTACCGTGTGGAGACCATGCCTGGGCTGGGCT...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CCTGGGGAGCCCAGGGATAGGTTAGGGTCACTTCATCACCCCTCAACTCAGGTTAGGCACTTGGCAAGCTaGGTCCAGGTGGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PGEPRDRLGSLHHPSTQVRHLAS*VQVVKS
Trigger: TGACTTCACCACCTGGACCCAGCTTGCCAAGTGCCT...AACCTGAGTTGAGGGGTGATGAAGTGACCCTAACCTATCCCTGGGCTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCTTCTCCAACAAGGACTCCACAGGCCCCGATaGTTGCCACGCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGIVMIPRYSPALLQQGLHRPR*LPRTSR
Trigger: CCTGGATGTGCGTGGCAACCATCGGGGCCTGTGGAG...TCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGCCCACCATCAGGAAGTaGTTCTTCTTCCGAAACAAT +
Preference number: 4 (lower is better)
Translates to: QHVGPSWACPWVGHSSFLPTIRK*FFFRNN
Trigger: ATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGG...CAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGGGCCTGTCCATGGGTTaGGCACAGCAGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QPLPASTKSYRMEGRASQGLSMG*AQQFPE
Trigger: CTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCC...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTAGCTGGGCCTGTCCATaGGTTGGGCACAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RAAFQPKKKSRPSRFGLFSWACP*VGHSSF
Trigger: GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCT...AAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGATGAGAGTGCCAAGCTaGGCTTCGAGGCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: QPLPASTKSYRMEGRASQMRVPS*ASRPTG
Trigger: ACCAGTGGGCCTCGAAGCCCAGCTTGGCACTCTCAT...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp GGGTATAGCCCATTCCCAGGCTTACCTGTACAGGTAATTGGGTCGGTTCCCTGCACATCCATGGGTTCCTaGGGGACATGGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: GYSPFPGLPVQVIGSVPCTSMGS*GTWPLL
Trigger: GAGCAGTGGCCATGTCCCCCAGGAACCCATGGATGT...GCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGGGAATGGGCTATACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCTGCGAGCCATCGATGTaGAGATCCTGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGQDELLGIVMIPRYSPACEPSM*RSCSSW
Trigger: CCAGCTGCTGCAGGATCTTCACATCGATGGCTCGCA...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACCCTCCAGCACCGTGGTaGCATCCACTGCCACATATA +
Preference number: 4 (lower is better)
Translates to: HLQNPTGWREGLASLGVHPPAPW*HPLPHI
Trigger: TATATGTGGCAGTGGATGGCACCACGGTGCTGGAGG...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp AGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAAATTGGGTCGGTTCCCTaGAATGACAGCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: RNPGPPGSACFQGPQDSQIGSVP*NDSHRH
Trigger: GTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAAT...TTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp CTCATAGTAGCCGTCAATGAAAACTGTTATCATCTGAGGAGACACCCCCTGGGCAGGGCATCGAGGCAGTaGGCTGGCTGTTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LIVAVNENCYHLRRHPLGRASRQ*AGCWRS
Trigger: GCTCCTCCAACAGCCAGCGCACTGCCTCGATGCCCT...GCCCAGGGGGTGTCTCCTCAGATGATAACAGTTTTCATTGACGGCTACTATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCAGGTCACTTTCCCTCTaGCCACCTCTGCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTRSLSL*PPLQSK
Trigger: CTTGGATTGCAGAGGTGGGCAGAGGGAAAGTGACCT...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCATCCTCCAGCACCGTaGTGCCATCCACTGCCACAT +
Preference number: 4 (lower is better)
Translates to: KGQDELLGIVMIPRYSPAHPPAP*CHPLPH
Trigger: ATGTGGCAGTGGATGGCACCACGGTGCTGGAGGATG...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGGCTGTGTCCTTGAGGTaGAAGGAGCCCTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: QPLPASTKSYRMEGRASQAVSLR*KEPSSL
Trigger: CAAGGATGAGGGCTCCTTCCACCTCAAGGACACAGC...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371984.8
CDS-3UTR CCA 90 bp GGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCTTGTTGTCTGGGAGTaGGTCAGGGCTGAACTCGAT +
Preference number: 4 (lower is better)
Translates to: GTPTIRKWFFFRNNLHRPLVVWE*VRAELD
Trigger: ATCGAGTTCAGCCCTGACCCACTCCCAGACAACAAG...GGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCGGCTCCCTCCTCCTTTaGGGGTGGCTCCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: KGQDELLGIVMIPRYSPAGSLLL*GWLQEN
Trigger: ATTTTCCTGGAGCCACCCCCAAAGGAGGAGGGAGCC...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTGCGAGGCCCACTGGTTCTaGGAGCAGTGCCAGGATGAT +
Preference number: 4 (lower is better)
Translates to: PSGSGSSSETISTGPDGCEAHWF*EQCQDD
Trigger: ATCATCCTGGCACTGCTCCCAGAACCAGTGGGCCTC...GCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CAA 72 bp ATGTCCCAATCCCAGAGCTTTTCCGGTGTAGGCCACTaGGGCTCAAGCTCCTCCTTGTACAAGGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: MSQSQSFSGVGH*GSSSSLYKDLL
Trigger: CAGGAGGTCCTTGTACAAGGAGGAGCTTGAGCCCAAGTGGCCTACACCGGAAAAGCTCTGGGATTGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
3UTR CAA 72 bp TTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTaGCCACGCACATCCAGGTCCCAGATATGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FFFRNNLHRPRW*PRTSRSQIWRH
Trigger: GTGCCTCCATATCTGGGACCTGGATGTGCGTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp TCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTGCCACCTTCATTGGCTTCACTaGTGGCTCGCCGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGSGSSSETISTGPDGCHLHWLH*WLAECP
Trigger: TGGACACTCGGCGAGCCATCAGTGAAGCCAATGAAG...GTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp GGCATGGTCTCCACACGGTACAGTAGTGCTGGGTCCTCAGCCGTGTGTTCATACATGGCCTCATCCTCATaGGGTGAGTACGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: GMVSTRYSSAGSSAVCSYMASSS*GEYVSN
Trigger: GTTTGACACGTACTCACCTCATGAGGATGAGGCCAT...GTATGAACACACGGCTGAGGACCCAGCACTACTGTACCGTGTGGAGACCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp AAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAGAACCTCAGCCTCACTaGGCAGCCTGTGAACTTCCA +
Preference number: 4 (lower is better)
Translates to: KSRPSRFGLFSRPSGQSIEPQPH*AACELP
Trigger: TGGAAGTTCACAGGCTGCTCAGTGAGGCTGAGGTTC...TATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACGCTGGGTCCAGGTGGTaGAGTCATCATCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLQNPTGWREGLASLGVHAGSRW*SHHLSP
Trigger: TGGAGAAAGATGATGACTTCACCACCTGGACCCAGC...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp GGGTATAGCCCATTCCCAGGCTTACCTGTACAGGTAATTGGGTCGGTTCCCTGCGCTGGGTCCAGGTGGTaGAGTCATCATCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GYSPFPGLPVQVIGSVPCAGSRW*SHHLSP
Trigger: TGGAGAAAGATGATGACTTCACCACCTGGACCCAGC...GCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGGGAATGGGCTATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGCCACATATACTTTaGTGCGACTTGAATACACCT +
Preference number: 4 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFLPHIL*CDLNTP
Trigger: AGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAG...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp CTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGCGTGGTGCCATCCACTaGCACATATACTTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: LPASTKSYRMEGRASQPGRGAIH*HIYFAA
Trigger: CGCAGCAAAGTATATGTGGCAGTGGATGGCACCACG...CCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCCTCCAGCACCGTGGTaGCATCCACTGCCACATATA +
Preference number: 4 (lower is better)
Translates to: IPAQKEIQALQVRPVFKAPPAPW*HPLPHI
Trigger: TATATGTGGCAGTGGATGGCACCACGGTGCTGGAGG...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCGTCAAACACACGTTTTaGCATCACGTGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: IPAQKEIQALQVRPVFKAVKHTF*HHVARG
Trigger: GCCACGGGCCACGTGATGGCAAAACGTGTGTTTGAC...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp AGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTGGGTGTGGGGTCCTTaGAGCTGCATACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: RAAFQPKKKSRPSRFGLFWVWGP*SCIHFH
Trigger: ATGGAAGTGTATGCAGCTGCAAGGACCCCACACCCA...AAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGTCCCAGGTACTCTCCTaGCCTTCTCCAACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QPLPASTKSYRMEGRASQSQVLS*PSPTRK
Trigger: CTTCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGA...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp GCCCAGGCATGGTCTCCACACGGTACAGTAGTGCTGGGTCCTCAGCCGTGTGTTAATCTATTGCCTTTCTaGCCACCTCAAGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AQAWSPHGTVVLGPQPCVNLLPF*PPQEFL
Trigger: GAGGAACTCTTGAGGTGGGCAGAAAGGCAATAGATT...AACACACGGCTGAGGACCCAGCACTACTGTACCGTGTGGAGACCATGCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp ATCTTTCTCCATTCGAATAAAGGCCACGTAGGTGTGGCCCTCTGTGTCTGGCAGTTGAGGACAATGACATaGATGCCCCGGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IFLHSNKGHVGVALCVWQLRTMT*MPRPCS
Trigger: GGAGCAGGGCCGGGGCATCCATGTCATTGTCCTCAA...CTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATTCGAATGGAGAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCTCTGTGTCTGCCCAGTaGCACTCTGCCTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGSVSAQ*HSASSA
Trigger: AGCAGAAGAGGCAGAGTGCCACTGGGCAGACACAGA...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCCTTGTTGTCTGGGAGTaGGTCAGGGCTGAACTCGAT +
Preference number: 4 (lower is better)
Translates to: SQAWKVRVFKGQDELLGILVVWE*VRAELD
Trigger: ATCGAGTTCAGCCCTGACCCACTCCCAGACAACAAG...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACTGATGGGAGTATGCTaGATGCCCCTCAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTLMGVC*MPLRPN
Trigger: GTTTGGTCTGAGGGGCATCCAGCATACTCCCATCAG...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACATCCACATTCCTGAGCTaGACACCTGGAACCGTGTTG +
Preference number: 4 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTSTFLS*TPGTVL
Trigger: CAACACGGTTCCAGGTGTCCAGCTCAGGAATGTGGA...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GGGTATAGCCCATTCCCAGGCTTACCTGTACAGGTAATTGGGTCGGTTCCCTGCCAAGGGTTCTTGCTGTaGTCCAGAACCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GYSPFPGLPVQVIGSVPCQGFLL*SRTSAS
Trigger: TGAGGCTGAGGTTCTGGACCACAGCAAGAACCCTTG...GCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGGGAATGGGCTATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCAGGCACTTGGCAAGCTaGGTCCAGGTGGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KGQDELLGIVMIPRYSPARHLAS*VQVVKS
Trigger: TGACTTCACCACCTGGACCCAGCTTGCCAAGTGCCT...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCAGATATGGAGGCACTTaGCAAGCTGGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IPAQKEIQALQVRPVFKARYGGT*QAGSRW
Trigger: CCACCTGGACCCAGCTTGCCAAGTGCCTCCATATCT...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAAAATCCTACAGGATaGAGGGAAGGGCTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTQNPTG*REGLAS
Trigger: GCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGATTCTGAGCCAGGCCTaGAAAGTGAGGGTATTCAAA +
Preference number: 4 (lower is better)
Translates to: PSWACPWVGHSSFLSKSQILSQA*KVRVFK
Trigger: TTTGAATACCCTCACTTTCCAGGCCTGGCTCAGAAT...CTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTATTGGCTCAGGAAACTaGAAAAATCCACAGCAATGT +
Preference number: 4 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSIGSGN*KNPQQC
Trigger: ACATTGCTGTGGATTTTTTCAGTTTCCTGAGCCAAT...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp AGGGATAGGTTAGGGTCACTTCATCACCCCTCAACTCAGGTTCCCCTGTGTTTAGACTGTCCACATTCCTaGGCTGGACACCTGGAACCG +
Preference number: 4 (lower is better)
Translates to: RDRLGSLHHPSTQVPLCLDCPHS*AGHLEP
Trigger: CGGTTCCAGGTGTCCAGCTCAGGAATGTGGACAGTC...TAAACACAGGGGAACCTGAGTTGAGGGGTGATGAAGTGACCCTAACCTATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCTGGGGTCCTTGCAGCTaGATACACTTCCATAGCCCT +
Preference number: 4 (lower is better)
Translates to: IPAQKEIQALQVRPVFKAWGPCS*IHFHSP
Trigger: AGGGCTATGGAAGTGTATGCAGCTGCAAGGACCCCA...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp AAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATATGGGAGTATGCTGGATaGCCCTCAGACCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: KSRPSRFGLFSRPSGQSIWEYAG*PSDQTV
Trigger: CACTGTTTGGTCTGAGGGGCATCCAGCATACTCCCA...TATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp AAGCCGGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACATGGGAGTATGCTGGATaGCCCTCAGACCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: KPGPPPSGSGSSSETISTWEYAG*PSDQTV
Trigger: CACTGTTTGGTCTGAGGGGCATCCAGCATACTCCCA...TGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGGGGTCCCGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp AAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAGGCCCAGAGTCCCTATaGTTACCCACAGAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: KSRPSRFGLFSRPSGQSIGPESL*LPTEVN
Trigger: ATTCACCTCTGTGGGTAAGCATAGGGACTCTGGGCC...TATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTGGCAATCACTGCTaGTCCATGTTGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGPGNHC*SMLYST
Trigger: GGTGGAGTACAACATGGAGCAGCAGTGATTGCCAGG...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp TCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTGCCACGTCCCTGGCAATCACTaGTGCTCCATGTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: SGSGSSSETISTGPDGCHVPGNH*CSMLYS
Trigger: GGAGTACAACATGGAGCAGCAGTGATTGCCAGGGAC...GTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCTCCGCAGGGCCCGCTaGTTTGTCAGTTTATACTTC +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGLRRAR*FVSLYF
Trigger: GAAGTATAAACTGACAAACCAGCGGGCCCTGCGGAG...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATCCTCCTCCAGTAGGTaGATGGATTGGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RNPGPPGSACFQGPQDSQSSSSR*MDWLRK
Trigger: TTTCCTGAGCCAATCCATCCACCTACTGGAGGAGGA...TTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCTCCACATTCCTGAGCTaGACACCTGGAACCGTGTTG +
Preference number: 4 (lower is better)
Translates to: KGQDELLGIVMIPRYSPASTFLS*TPGTVL
Trigger: CAACACGGTTCCAGGTGTCCAGCTCAGGAATGTGGA...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCAAGGGTTCTTGCTGTaGTCCAGAACCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IPAQKEIQALQVRPVFKAQGFLL*SRTSAS
Trigger: TGAGGCTGAGGTTCTGGACCACAGCAAGAACCCTTG...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GGCATGGTCTCCACACGGTACAGTAGTGCTGGGTCCTCAGCCGTGTGTTCATACCGTTCCGAGATGGACTaGGCAAAAGTTATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GMVSTRYSSAGSSAVCSYRSEMD*AKVIAG
Trigger: ACCAGCTATAACTTTTGCCCAGTCCATCTCGGAACG...GTATGAACACACGGCTGAGGACCCAGCACTACTGTACCGTGTGGAGACCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACTACTTTGCTGCGACTTaGATACACCTCTACGTCCAG +
Preference number: 4 (lower is better)
Translates to: HLQNPTGWREGLASLGVHYFAAT*IHLYVQ
Trigger: CTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTA...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCATGGCCTCATCCTCATaGGGTGAGTACGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGMASSS*GEYVSN
Trigger: GTTTGACACGTACTCACCTCATGAGGATGAGGCCAT...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCAAAACTGTTATCATCTaGGGAGACACCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGKTVII*GDTPWA
Trigger: AGCCCAGGGGGTGTCTCCTCAGATGATAACAGTTTT...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCAGTAGCCATTCATGTTaGGGCCGACGATGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KGQDELLGIVMIPRYSPASSHSC*GRRCQS
Trigger: ACTTTGGCATCGTCGGCCTCAACATGAATGGCTACT...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACAATTCAAAGGGCAGGATaGGCTGCTAGGGATCGTAAT +
Preference number: 4 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTIQRAG*AARDRN
Trigger: ATTACGATCCCTAGCAGCTCATCCTGCCCTTTGAAT...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp TCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTGCCACGGAGCAGTGCCAGGATaGTGTGACCTTCTTGTAACA +
Preference number: 4 (lower is better)
Translates to: SGSGSSSETISTGPDGCHGAVPG*CDLLVT
Trigger: TGTTACAAGAAGGTCACATCATCCTGGCACTGCTCC...GTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACAATCATAGTCTTGCTCTaGCTCTGGGTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTIIVLL*LWVFIG
Trigger: GCCAATGAAGACCCAGAGCCAGAGCAAGACTATGAT...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp AAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATATCCTCCTCCAGTAGGTaGATGGATTGGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KSRPSRFGLFSRPSGQSISSSSR*MDWLRK
Trigger: TTTCCTGAGCCAATCCATCCACCTACTGGAGGAGGA...TATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCTTCTCCAACAAGGAGTGGCCCTCTGTGTCTaGCAGGAAAGAGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LLGIVMIPRYSPALLQQGVALCV*QERVFT
Trigger: TGTGAAGACTCTTTCCTGCCAGACACAGAGGGCCAC...TCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCATTCTGAGCCAGGCCTaGAAAGTGAGGGTATTCAAA +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTILSQA*KVRVFK
Trigger: TTTGAATACCCTCACTTTCCAGGCCTGGCTCAGAAT...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp TCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCGATGGTTGCCACTACTTTGCTGCGACTTaGATACACCTCTACGTCCAG +
Preference number: 4 (lower is better)
Translates to: SGSGSSSETISTGPDGCHYFAAT*IHLYVQ
Trigger: CTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTA...GTGGCAACCATCGGGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCTTCTCCAACAAGGACTCATCCTCATGAGGTaGGTACGTGTCAAACACACG +
Preference number: 4 (lower is better)
Translates to: LLGIVMIPRYSPALLQQGLILMR*VRVKHT
Trigger: CGTGTGTTTGACACGTACTCACCTCATGAGGATGAG...TCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCTTCTCCAACAAGGAAAAACTGTTATCATCTaGGGAGACACCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLGIVMIPRYSPALLQQGKTVII*GDTPWA
Trigger: AGCCCAGGGGGTGTCTCCTCAGATGATAACAGTTTT...TCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR GCA 90 bp AAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAGCGTCTAGAATCTATTaGCTTTCTGCCCACCTCAAG +
Preference number: 4 (lower is better)
Translates to: KSRPSRFGLFSRPSGQSIASRIY*LSAHLK
Trigger: CTTGAGGTGGGCAGAAAGGCAATAGATTCTAGACGC...TATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCATAGTAGCCGTCAATaGAAACTGTTATCATCTGAG +
Preference number: 4 (lower is better)
Translates to: QNPTGWREGLASLGVHSTHSSRQ*KLLSSE
Trigger: CTCAGATGATAACAGTTTTCATTGACGGCTACTATG...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCGCTTACCCACAGAGGTaGATGCGTCTAGAATCTATT +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGAYPQR*MRLESI
Trigger: AATAGATTCTAGACGCATTCACCTCTGTGGGTAAGC...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCAGCTTTGGAAATCTaGACAAAGAGAAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGPALEI*TKRRLR
Trigger: TCTCAGCCTTCTCTTTGTCCAGATTTCCAAAGCTGG...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp GCCCAGGCATGGTCTCCACACGGTACAGTAGTGCTGGGTCCTCAGCCGTGTGTTCCTTTTGTAATCCTGTaGCTCTTTTATCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: AQAWSPHGTVVLGPQPCVPFVIL*LFYPLD
Trigger: ATCTAATGGATAAAAGAGCCACAGGATTACAAAAGG...AACACACGGCTGAGGACCCAGCACTACTGTACCGTGTGGAGACCATGCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR TCA 90 bp TTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAAATAGGTTAGATTCTGAGCAGCCACAGGCACATTaGGGACCTTGTTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FGLFSRPSGQSINRLDSEQPQAH*GPCCLG
Trigger: TCCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTG...CTCAGAATCTAACCTATTTATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CAGCCCCTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCATAGTAGCCGTCAATaGAAACTGTTATCATCTGAG +
Preference number: 4 (lower is better)
Translates to: QPLPASTKSYRMEGRASQHSSRQ*KLLSSE
Trigger: CTCAGATGATAACAGTTTTCATTGACGGCTACTATG...CTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAGGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCATTGGCTCAGGAAACTaGAAAAATCCACAGCAATGT +
Preference number: 4 (lower is better)
Translates to: SQAWKVRVFKGQDELLGIIGSGN*KNPQQC
Trigger: ACATTGCTGTGGATTTTTTCAGTTTCCTGAGCCAAT...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR TCA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCAGTGCCAGGATGATGTaGCCTTCTTGTAACAACTAT +
Preference number: 4 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGSARMM*PSCNNY
Trigger: ATAGTTGTTACAAGAAGGTCACATCATCCTGGCACT...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR GCA 90 bp TTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAAATAGGTTAGATTCTGAGCCCTCTGCCCACCTCTaGAATCCAAGGCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: FGLFSRPSGQSINRLDSEPSAHL*NPRPSH
Trigger: ATGTGAAGGCCTTGGATTGCAGAGGTGGGCAGAGGG...CTCAGAATCTAACCTATTTATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp ATCTTTCTCCATTCGAATAAAGGCCACGTAGGTGTGGCCCTCTGTGTCTGGCAGCCCACCATCAGGAAGTaGTTCTTCTTCCGAAACAAT +
Preference number: 4 (lower is better)
Translates to: IFLHSNKGHVGVALCVWQPTIRK*FFFRNN
Trigger: ATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGG...CTGCCAGACACAGAGGGCCACACCTACGTGGCCTTTATTCGAATGGAGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CCA 90 bp TTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAAATAGGTTAGATTCTGAGGTGTGTTCATACCCCTaGTCATTCCAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: FGLFSRPSGQSINRLDSEVCSYP*SFQAEM
Trigger: CATCTCTGCCTGGAATGACCAGGGGTATGAACACAC...CTCAGAATCTAACCTATTTATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CCA 90 bp TTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAAATAGGTTAGATTCTGAGCCAGCTTTGGAAATCTaGACAAAGAGAAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FGLFSRPSGQSINRLDSEPALEI*TKRRLR
Trigger: TCTCAGCCTTCTCTTTGTCCAGATTTCCAAAGCTGG...CTCAGAATCTAACCTATTTATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS GCA 90 bp CCTCATCCTCCAGCACCTCTACGTCCAGGACCCGCCGGGGACCACTaGCTCTGCGCCGTGGGGGCTCCAGGCGGCCTAGGGCCTCATCAT +
Preference number: 5 (lower is better)
Translates to: PHPPAPLRPGPAGDH*LCAVGAPGGLGPHH
Trigger: ATGATGAGGCCCTAGGCCGCCTGGAGCCCCCACGGCGCAGAGGCAGTGGTCCCCGGCGGGTCCTGGACGTAGAGGTGCTGGAGGATGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS GCA 90 bp CAGGCGGGAGCCCAGGCCGCTCAAGGCGAGGCAGCTGGGACAGCCTaGCAGACACCAGCACCACCGACCGGCTGGACAGTGTCTCTATTG +
Preference number: 5 (lower is better)
Translates to: QAGAQAAQGEAAGTA*QTPAPPTGWTVSLL
Trigger: CAATAGAGACACTGTCCAGCCGGTCGGTGGTGCTGGTGTCTGGCAGGCTGTCCCAGCTGCCTCGCCTTGAGCGGCCTGGGCTCCCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 90 bp TATAGCCTGACAGGCGGGAGCCCAGGCCGCTCAAGGCGAGGCAGCTaGGACAGCCTGCCAGACACCAGCACCACCGACCGGCTGGACAGT +
Preference number: 5 (lower is better)
Translates to: YSLTGGSPGRSRRGS*DSLPDTSTTDRLDS
Trigger: ACTGTCCAGCCGGTCGGTGGTGCTGGTGTCTGGCAGGCTGTCCCAGCTGCCTCGCCTTGAGCGGCCTGGGCTCCCGCCTGTCAGGCTATA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS GCA 90 bp TGCGACTTGAATACACCTCTACGTCCAGGACCCGCCGGGGACCACTaGCTCTGCGCCGTGGGGGCTCCAGGCGGCCTAGGGCCTCATCAT +
Preference number: 5 (lower is better)
Translates to: CDLNTPLRPGPAGDH*LCAVGAPGGLGPHH
Trigger: ATGATGAGGCCCTAGGCCGCCTGGAGCCCCCACGGCGCAGAGGCAGTGGTCCCCGGCGGGTCCTGGACGTAGAGGTGTATTCAAGTCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS CCA 90 bp CCGACCGGCTGGACAGTGTCTCTATTGGCAGCTTCCTGGACACAGTaGCCCCCAGCGAGCTGGATGAACAGGGCCCACCTGGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: PTGWTVSLLAASWTQ*PPASWMNRAHLGLH
Trigger: GTGGAGCCCCAGGTGGGCCCTGTTCATCCAGCTCGCTGGGGGCCACTGTGTCCAGGAAGCTGCCAATAGAGACACTGTCCAGCCGGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS TCA 90 bp CTCTATTGGCAGCTTCCTGGACACAGTGGCCCCCAGCGAGCTGGATaGACAGGGCCCACCTGGGGCTCCACGTTCCGAGATGGACTGGGC +
Preference number: 5 (lower is better)
Translates to: LYWQLPGHSGPQRAG*TGPTWGSTFRDGLG
Trigger: GCCCAGTCCATCTCGGAACGTGGAGCCCCAGGTGGGCCCTGTTCATCCAGCTCGCTGGGGGCCACTGTGTCCAGGAAGCTGCCAATAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 90 bp TGGGCTTCCAGTCGTCCATACCGGATTGGCGGGTCACCAATGTCCTaGCCAGCCCATGACTTCAGGAATGGCTTAGGGGCCCCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: WASSRPYRIGGSPMS*PAHDFRNGLGAPGP
Trigger: GGGGCCCGGGGCCCCTAAGCCATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACTGGAAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371984.8
CDS-3UTR CAA 90 bp ATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCGCAGGGTTGGCCCGTGGCCTGGTaGAGGACAATGACATGGATG +
Preference number: 5 (lower is better)
Translates to: MEGRASQPGGTQYPAPQGWPVAW*RTMTWM
Trigger: CATCCATGTCATTGTCCTCAACCAGGCCACGGGCCA...ACCCTGCGGGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCTCCGGTGTAGGCCACTaGGGCTCAAGCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PTGWREGLASLGVHSTQPSGVGH*GSSSSL
Trigger: CAAGGAGGAGCTTGAGCCCAAGTGGCCTACACCGGA...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGACCAGGCTAGGGAGCTaGAGAGCTGTGTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: QHVGPSWACPWVGHSSFLTRLGS*RAVWKP
Trigger: GGGCTTCCACACAGCTCTCAAGCTCCCTAGCCTGGT...CAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS TCA 90 bp GCGAGCCATCGATGTGAAGATCCTGCAGCAGCTGGTGACCTTGAATaGGGGCATCGAGGCAGTGCGCTGGCTGTTGGAGGAGCGGGGGAC +
Preference number: 5 (lower is better)
Translates to: ASHRCEDPAAAGDLE*GHRGSALAVGGAGD
Trigger: GTCCCCCGCTCCTCCAACAGCCAGCGCACTGCCTCGATGCCCTCATTCAAGGTCACCAGCTGCTGCAGGATCTTCACATCGATGGCTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 90 bp GGAGGGAGAAATGGGTCAGGGGAGTGGGCAGGCCCTCAGGTCCCATaGGTAGCACTGAGCAGGGCAAGGGGTCACATGGGAATCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GGRNGSGEWAGPQVP*VALSRARGHMGICS
Trigger: GCTACAGATTCCCATGTGACCCCTTGCCCTGCTCAGTGCTACCCATGGGACCTGAGGGCCTGCCCACTCCCCTGACCCATTTCTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS-3UTR CAA 90 bp ATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCCGCAGGGTACAGCCACAGGCACATaGAGGACCTTGTTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: MEGRASQPGGTQYPAPQGTATGT*RTLLSG
Trigger: CCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTGT...ACCCTGCGGGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp ACAGCCCTTGCCTGGGCGGTCTCCCTTGCCCGTCCCTGGCAATCACTGCTGCTCGACACGCGGGCATTCTaGATGCTGATGGGAGTATGC +
Preference number: 5 (lower is better)
Translates to: TALAWAVSLARPWQSLLLDTRAF*MLMGVC
Trigger: GCATACTCCCATCAGCATCAAGAATGCCCGCGTGTC...GAGCAGCAGTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGGCAAGGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp GCCGACGATGCCAAAGTGGTAGGATCGGGAAACGTCAGGGATGATGCACTCTCGCGAGCCCCAAAGGGCTaGATGAGGGGGCTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ADDAKVVGSGNVRDDALSRAPKG*MRGLGF
Trigger: GAAGCCCAGCCCCCTCATCAAGCCCTTTGGGGCTCG...CGAGAGTGCATCATCCCTGACGTTTCCCGATCCTACCACTTTGGCATCGTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCTGTCAAACACACGTTTaGCCATCACGTGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: PTGWREGLASLGVHSTQPCQTHV*PSRGPW
Trigger: CCACGGGCCACGTGATGGCAAAACGTGTGTTTGACA...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp GGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAGGCCCCTCTCGGCCCCGGCGTaGTTCAGGCATCCGCATCCA +
Preference number: 5 (lower is better)
Translates to: GTPTIRKWFFFRNNLHRPLSAPA*FRHPHP
Trigger: TGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAG...GGGCCTGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGGGGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp CAGCATCCTGGGGAGCCCAGGGATAGGTTAGGGTCACTTCATCACCCCTCAACTCACAGGCCCCGATGGTaGCCACGCACATCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QHPGEPRDRLGSLHHPSTHRPRW*PRTSRS
Trigger: GGACCTGGATGTGCGTGGCAACCATCGGGGCCTGTG...AGTTGAGGGGTGATGAAGTGACCCTAACCTATCCCTGGGCTCCCCAGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS CCA 90 bp CTGGATGAACAGGGCCCACCTGGGGCTCCACGTTCCGAGATGGACTaGGCAAAAGTTATAGCTGGTGGAGAGAGGGCCAGGACTGAGGTG +
Preference number: 5 (lower is better)
Translates to: LDEQGPPGAPRSEMD*AKVIAGGERARTEV
Trigger: CACCTCAGTCCTGGCCCTCTCTCCACCAGCTATAACTTTTGCCCAGTCCATCTCGGAACGTGGAGCCCCAGGTGGGCCCTGTTCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 90 bp TGGGCTTCCAGTCGTCCATACCGGATTGGCGGGTCACCAATGTCCTaGCCAGCCCATGACTTCAGGAATCTGAAGGGACCAGAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: WASSRPYRIGGSPMS*PAHDFRNLKGPEGH
Trigger: GTGGCCCTCTGGTCCCTTCAGATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACTGGAAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS-3UTR CAA 90 bp CAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAAGGAGCCCTCATCCTaGACAGTGCAGATGAGCACT +
Preference number: 5 (lower is better)
Translates to: QHVGPSWACPWVGHSSFLKEPSS*TVQMST
Trigger: AGTGCTCATCTGCACTGTCAAGGATGAGGGCTCCTT...CAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371984.8
CDS-3UTR CAA 90 bp TGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCGGCACATTGAGGACCTaGTTGTCTGGGAGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: CQHVGPSWACPWVGHSSFGTLRT*LSGSGS
Trigger: TGACCCACTCCCAGACAACAAGGTCCTCAATGTGCC...GAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTGACACGCGGGCATTCTaGATGCTGATGGGAGTATGC +
Preference number: 5 (lower is better)
Translates to: HVGPSWACPWVGHSSFLSDTRAF*MLMGVC
Trigger: GCATACTCCCATCAGCATCAAGAATGCCCGCGTGTC...ACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CTACCAGCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGCTCTCGGCCCCGGCGTaGTTCAGGCATCCGCATCCA +
Preference number: 5 (lower is better)
Translates to: LPASTKSYRMEGRASQPGLSAPA*FRHPHP
Trigger: TGGATGCGGATGCCTGAACAACGCCGGGGCCGAGAG...CCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGCTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCCACAGGCCCCGATGGTaGCCACGCACATCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SQAWKVRVFKGQDELLGIHRPRW*PRTSRS
Trigger: GGACCTGGATGTGCGTGGCAACCATCGGGGCCTGTG...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACCTCAGGAACGGGGTGTaGGAGCAGGGGAACCCTCCC +
Preference number: 5 (lower is better)
Translates to: HLQNPTGWREGLASLGVHLRNGV*EQGNPP
Trigger: GGGAGGGTTCCCCTGCTCCAACACCCCGTTCCTGAG...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCCTGGGCGGTCTCCCTaGCCCGTCCCTGGCAATCAC +
Preference number: 5 (lower is better)
Translates to: KGQDELLGIVMIPRYSPAPGRSP*PVPGNH
Trigger: GTGATTGCCAGGGACGGGCAAGGGAGACCGCCCAGG...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS TCA 90 bp CAGCACCGTGGTGCCATCCACTGCCACATATACTTTGCTGCGACTTaGATACACCTCTACGTCCAGGACCCGCCGGGGACCACTGCCTCT +
Preference number: 5 (lower is better)
Translates to: QHRGAIHCHIYFAAT*IHLYVQDPPGTTAS
Trigger: AGAGGCAGTGGTCCCCGGCGGGTCCTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAGTGGATGGCACCACGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS GCA 90 bp CCTCATCCTCCAGCACCGTGGTGCCATCCACTGCCACATATACTTTaGTGCGACTTGAATACACCTCTACGTCCAGGACCCGCCGGGGAC +
Preference number: 5 (lower is better)
Translates to: PHPPAPWCHPLPHIL*CDLNTPLRPGPAGD
Trigger: GTCCCCGGCGGGTCCTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAGTGGATGGCACCACGGTGCTGGAGGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS CCA 90 bp TTCAAGGTGGACCACCTGAGTCACCAGAGGATGAGAGTGCCAAGCTaGGCTTCGAGGCCCACTGGTTCTGGGAGCAGTGCCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: FKVDHLSHQRMRVPS*ASRPTGSGSSARMM
Trigger: CATCATCCTGGCACTGCTCCCAGAACCAGTGGGCCTCGAAGCCCAGCTTGGCACTCTCATCCTCTGGTGACTCAGGTGGTCCACCTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 90 bp TTTGGGCTGGGCTGGCTCAAGGCCTCCCTTGCTGTAACTGGGGAATaGTCCTCTGAATGCAGCCAGGTGGGTTGGCGGTACCTAAGGACT +
Preference number: 5 (lower is better)
Translates to: FGLGWLKASLAVTGE*SSECSQVGWRYLRT
Trigger: AGTCCTTAGGTACCGCCAACCCACCTGGCTGCATTCAGAGGACCATTCCCCAGTTACAGCAAGGGAGGCCTTGAGCCAGCCCAGCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS-3UTR CAA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCGAGCCCCAAAGGGCTaGATGAGGGGGCTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGRAPKG*MRGLGF
Trigger: GAAGCCCAGCCCCCTCATCAAGCCCTTTGGGGCTCG...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp TGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCCTGAGTAAGAGCCAGCCCCACACATTGAGGACCTTGTaGTCTGGGAGTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: WACPWVGHSSFLSKSQPHTLRTL*SGSGSG
Trigger: CCCTGACCCACTCCCAGACAACAAGGTCCTCAATGT...GTGGGGCTGGCTCTTACTCAGGAAACTGCTGTGCCCAACCCATGGACAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCTTCTCCAACAAGGAGCAGTGCGCTGGCTGTaGGAGGAGCGGGGGACGTTG +
Preference number: 5 (lower is better)
Translates to: LLGIVMIPRYSPALLQQGAVRWL*EERGTL
Trigger: CAACGTCCCCCGCTCCTCCAACAGCCAGCGCACTGC...TCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS TCA 90 bp GATGGACTGGGCAAAAGTTATAGCTGGTGGAGAGAGGGCCAGGACTaGGGTGGATGTGGCAGCCACCAGGCTAGGGAGCTTGAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: DGLGKSYSWWREGQD*GGCGSHQARELESC
Trigger: ACAGCTCTCAAGCTCCCTAGCCTGGTGGCTGCCACATCCACCTCAGTCCTGGCCCTCTCTCCACCAGCTATAACTTTTGCCCAGTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS TCA 90 bp GCCCTGCTCCCTGCCTCCCACTCACGTGAAAGTAGCCATTCATGTTaGGGCCGACGATGCCAAAGTGGTAGGATCGGGAAACGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: ALLPASHSRESSHSC*GRRCQSGRIGKRQG
Trigger: TCCCTGACGTTTCCCGATCCTACCACTTTGGCATCGTCGGCCTCAACATGAATGGCTACTTTCACGTGAGTGGGAGGCAGGGAGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463030.1
ENST00000485714.1
CDS TCA 90 bp GGGAGGACCTCCCAGCAACTCTTCCCTGCAAGCACCCATACTGTGTaGCATGGGGAAAGTGGCTCAACTTCTCTGGGCTGGCAGGAAACC +
Preference number: 5 (lower is better)
Translates to: GRTSQQLFPASTHTV*HGESGSTSLGWQET
Trigger: GGTTTCCTGCCAGCCCAGAGAAGTTGAGCCACTTTCCCCATGTCACACAGTATGGGTGCTTGCAGGGAAGAGTTGCTGGGAGGTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS TCA 90 bp TTGGCGGGTCACCAATGTCCTGGCCAGCCCATGACTTCAGGAATCTaGAGGGACCAGAGGGCCACATGGGGTAAGATGCTCCTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LAGHQCPGQPMTSGI*RDQRATWGKMLLPK
Trigger: CTTTGGGAGGAGCATCTTACCCCATGTGGCCCTCTGGTCCCTTCAGATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS TCA 90 bp TCGTCCATACCGGATTGGCGGGTCACCAATGTCCTGGCCAGCCCATaGCTTCAGGAATCTGAAGGGACCAGAGGGCCACATGGGGTAAGA +
Preference number: 5 (lower is better)
Translates to: SSIPDWRVTNVLASP*LQESEGTRGPHGVR
Trigger: TCTTACCCCATGTGGCCCTCTGGTCCCTTCAGATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS GCA 90 bp TGGCTCAAGGCCTCCCTTGCTGTAACTGGGGAATGGTCCTCTGAATaGAGCCAGGTGGGTTGGCGGTACCTAAGGACTTCCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: WLKASLAVTGEWSSE*SQVGWRYLRTSLFS
Trigger: GGAGAACAGGGAAGTCCTTAGGTACCGCCAACCCACCTGGCTGCATTCAGAGGACCATTCCCCAGTTACAGCAAGGGAGGCCTTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 90 bp TGGGCTTCCAGTCGTCCATACCGGATTGGCGGGTCACCAATGTCCTaGCCAGCCCATGACTTCAGGAATCTGCGAGCCATCGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: WASSRPYRIGGSPMS*PAHDFRNLRAIDVK
Trigger: CTTCACATCGATGGCTCGCAGATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACTGGAAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 90 bp AGGGCCACATGGGGTAAGATGCTCCTCCCAAAGTCTGATGCCTTCTaGGGAGATGAGGGAGGACCTCCCAGCAACTCTTCCCTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: RATWGKMLLPKSDAF*GDEGGPPSNSSLQA
Trigger: TGCTTGCAGGGAAGAGTTGCTGGGAGGTCCTCCCTCATCTCCCCAGAAGGCATCAGACTTTGGGAGGAGCATCTTACCCCATGTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS-3UTR CAA 90 bp TCAGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTGTCGTCCATACCGGATaGGCGGGTCACCAATGTCCT +
Preference number: 5 (lower is better)
Translates to: SGQHSSPKRNPGPPGSACVVHTG*AGHQCP
Trigger: AGGACATTGGTGACCCGCCAATCCGGTATGGACGAC...ACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CAGCATCCTGGGGAGCCCAGGGATAGGTTAGGGTCACTTCATCACCCCTCAACTTGGCCCGTGGCCTGGTaGAGGACAATGACATGGATG +
Preference number: 5 (lower is better)
Translates to: QHPGEPRDRLGSLHHPSTWPVAW*RTMTWM
Trigger: CATCCATGTCATTGTCCTCAACCAGGCCACGGGCCA...AGTTGAGGGGTGATGAAGTGACCCTAACCTATCCCTGGGCTCCCCAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp AGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAACCGGGCGCTACCATGTaGAGGAATAGCACCATGGCC +
Preference number: 5 (lower is better)
Translates to: RNPGPPGSACFQGPQDSQPGATM*RNSTMA
Trigger: GGCCATGGTGCTATTCCTCAACATGGTAGCGCCCGG...TTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CTTTTCCGGTGTAGGCCACTTGGGCTCAAGCTCCTCCTTGTACAAGGACCTCCTCCGGGCGCTACCATGTaGAGGAATAGCACCATGGCC +
Preference number: 5 (lower is better)
Translates to: LFRCRPLGLKLLLVQGPPPGATM*RNSTMA
Trigger: GGCCATGGTGCTATTCCTCAACATGGTAGCGCCCGG...AGGAGGTCCTTGTACAAGGAGGAGCTTGAGCCCAAGTGGCCTACACCGGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp CATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACTCCGGTGTAGGCCACTaGGGCTCAAGCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: HLQNPTGWREGLASLGVHSGVGH*GSSSSL
Trigger: CAAGGAGGAGCTTGAGCCCAAGTGGCCTACACCGGA...GTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp TGTGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTTCTTCACAAGGGTTCTaGCTGTGGTCCAGAACCTCA +
Preference number: 5 (lower is better)
Translates to: CVSMWAPAGPVHGLGTAVSSQGF*LWSRTS
Trigger: TGAGGTTCTGGACCACAGCAAGAACCCTTGTGAAGA...AACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCCAGCCCAGGGGAACCCTCCCCTaGGAGTTAGTAATTAAGTCT +
Preference number: 5 (lower is better)
Translates to: PTGWREGLASLGVHSTQPRGTLP*ELVIKS
Trigger: AGACTTAATTACTAACTCCAAGGGGAGGGTTCCCCT...GGGCTGGGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCCTTCTCCAACAAGGACTCAGGAACGGGGTGTaGGAGCAGGGGAACCCTCCC +
Preference number: 5 (lower is better)
Translates to: LLGIVMIPRYSPALLQQGLRNGV*EQGNPP
Trigger: GGGAGGGTTCCCCTGCTCCAACACCCCGTTCCTGAG...TCCTTGTTGGAGAAGGGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS GCA 90 bp ACCCATGAACTAGCAGTCCCTGCCTCTTGTAGTTCTCCCTGGGCCTaGTGTTCTAGAGCCACAGATGTCAGAAACAGGCCCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: THELAVPASCSSPWA*CSRATDVRNRPCRR
Trigger: CCTCCTGCAGGGCCTGTTTCTGACATCTGTGGCTCTAGAACAGCAGGCCCAGGGAGAACTACAAGAGGCAGGGACTGCTAGTTCATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 90 bp CCTCTGGCTTCTAGGAGGTTCCAAGCTGGACGCTATTCATTCCTTTaGGCTGGGCTGGCTCAAGGCCTCCCTTGCTGTAACTGGGGAATG +
Preference number: 5 (lower is better)
Translates to: PLASRRFQAGRYSFL*AGLAQGLPCCNWGM
Trigger: CATTCCCCAGTTACAGCAAGGGAGGCCTTGAGCCAGCCCAGCCCAAAGGAATGAATAGCGTCCAGCTTGGAACCTCCTAGAAGCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 90 bp CCACAGACCCATGAACTAGCAGTCCCTGCCTCTTGTAGTTCTCCCTaGGCCTGCTGTTCTAGAGCCACAGATGTCAGAAACAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PQTHELAVPASCSSP*ACCSRATDVRNRPC
Trigger: GCAGGGCCTGTTTCTGACATCTGTGGCTCTAGAACAGCAGGCCCAGGGAGAACTACAAGAGGCAGGGACTGCTAGTTCATGGGTCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS-3UTR CAA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACAGCCTCCGGAAACAGGTaGAAAGTGGCAGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTASGNR*KVAVRL
Trigger: CAGCCTCACTGCCACTTTCAACCTGTTTCCGGAGGC...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCGCCTCCGGAAACAGGTaGAAAGTGGCAGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SQAWKVRVFKGQDELLGIASGNR*KVAVRL
Trigger: CAGCCTCACTGCCACTTTCAACCTGTTTCCGGAGGC...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp TGTGTCAGCATGTGGGCCCCAGCTGGGCCTGTCCATGGGTTGGGCACAGCAGTTACACCTGGAACCGTGTaGAACTTGTGCTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: CVSMWAPAGPVHGLGTAVTPGTV*NLCFLK
Trigger: CTTCAAGAAGCACAAGTTCAACACGGTTCCAGGTGT...AACTGCTGTGCCCAACCCATGGACAGGCCCAGCTGGGGCCCACATGCTGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CCCCTGTGTTTACAGCTGGGCCCAGAGTCCCTATGCTTACCCACAGAGGTGAATCAGATATGGAGGCACTaGGCAAGCTGGGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: PLCLQLGPESLCLPTEVNQIWRH*ASWVQV
Trigger: CACCTGGACCCAGCTTGCCAAGTGCCTCCATATCTG...ATTCACCTCTGTGGGTAAGCATAGGGACTCTGGGCCCAGCTGTAAACACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCACTGCTGCTCCATGTaGTACTCCACCCGAGGCACC +
Preference number: 5 (lower is better)
Translates to: IPAQKEIQALQVRPVFKAHCCSM*YSTRGT
Trigger: GGTGCCTCGGGTGGAGTACAACATGGAGCAGCAGTG...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS TCA 90 bp CCGGGCGCTACCATGTTGAGGAATAGCACCATGGCCTCATCCTCATaGGGTGAGTACGTGTCAAACACACGTTTTGCCATCACGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PGATMLRNSTMASSS*GEYVSNTRFAITWP
Trigger: GGGCCACGTGATGGCAAAACGTGTGTTTGACACGTACTCACCTCATGAGGATGAGGCCATGGTGCTATTCCTCAACATGGTAGCGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000489985.1
ENST00000497439.5
CDS TCA 90 bp CAGGTGGGTTGGCGGTACCTAAGGACTTCCCTGTTCTCCTCAGGCTaGAGCATAGGCTCCAGCACTTGCCAAAACAGGAAAGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: QVGWRYLRTSLFSSG*SIGSSTCQNRKGQR
Trigger: TCTCTGCCCTTTCCTGTTTTGGCAAGTGCTGGAGCCTATGCTTCAGCCTGAGGAGAACAGGGAAGTCCTTAGGTACCGCCAACCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS GCA 90 bp ATGCCTTCTGGGGAGATGAGGGAGGACCTCCCAGCAACTCTTCCCTaGAAGCACCCATACTGTGTGACATGGGGAAAGTGGCTCAACTTC +
Preference number: 5 (lower is better)
Translates to: MPSGEMREDLPATLP*KHPYCVTWGKWLNF
Trigger: GAAGTTGAGCCACTTTCCCCATGTCACACAGTATGGGTGCTTGCAGGGAAGAGTTGCTGGGAGGTCCTCCCTCATCTCCCCAGAAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS CCA 90 bp GGAGAGGAATGGGGCTCGCGTATTAGTCAGCCTCTGAGGGACCTCTaGCTTCTAGGAGGTTCCAAGCTGGACGCTATTCATTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: GEEWGSRISQPLRDL*LLGGSKLDAIHSFG
Trigger: CCCAAAGGAATGAATAGCGTCCAGCTTGGAACCTCCTAGAAGCCAGAGGTCCCTCAGAGGCTGACTAATACGCGAGCCCCATTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS-3UTR CAA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCGTCGTCCATACCGGATaGGCGGGTCACCAATGTCCT +
Preference number: 5 (lower is better)
Translates to: IPAQKEIQALQVRPVFKAVVHTG*AGHQCP
Trigger: AGGACATTGGTGACCCGCCAATCCGGTATGGACGAC...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACAGCAGGGCCCGCTGGTTaGTCAGTTTATACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTAGPAG*SVYTSR
Trigger: CCTGGAAGTATAAACTGACAAACCAGCGGGCCCTGC...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS GCA 90 bp AAGCAGAGAGCGCAGCATCCTGTACAGGTAATTGGGTCGGTTCCCTaGAATGACAGCCACAGGCACATTGAGGACCTTGTTGTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: KQRAQHPVQVIGSVP*NDSHRHIEDLVVWE
Trigger: CTCCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAATTACCTGTACAGGATGCTGCGCTCTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000371992.1
CDS CCA 90 bp GGGGAAAGTGGCTCAACTTCTCTGGGCTGGCAGGAAACCCTTCAGTaGGGTTGGATCACCTGGAAATTCCCTGAGACTGGAGTAACTCTC +
Preference number: 5 (lower is better)
Translates to: GESGSTSLGWQETLQ*GWITWKFPETGVTL
Trigger: GAGAGTTACTCCAGTCTCAGGGAATTTCCAGGTGATCCAACCCCACTGAAGGGTTTCCTGCCAGCCCAGAGAAGTTGAGCCACTTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS-3UTR CAA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCGGCCTCATCATAGTCTaGCTCTGGCTCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGGLIIV*LWLWVF
Trigger: GAAGACCCAGAGCCAGAGCAAGACTATGATGAGGCC...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp AAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAGGCCTCATCATAGTCTaGCTCTGGCTCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: KSRPSRFGLFSRPSGQSIGLIIV*LWLWVF
Trigger: GAAGACCCAGAGCCAGAGCAAGACTATGATGAGGCC...TATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCGGCACATTGAGGACCTaGTTGTCTGGGAGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: KGQDELLGIVMIPRYSPAGTLRT*LSGSGS
Trigger: TGACCCACTCCCAGACAACAAGGTCCTCAATGTGCC...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp AGCCAGGCCTGGAAAGTGAGGGTATTCAAAGGGCAGGATGAGCTGCTAGGGATCAGAACCACAGCAAACTaGGCCTCCGGAAACAGGTTG +
Preference number: 5 (lower is better)
Translates to: SQAWKVRVFKGQDELLGIRTTAN*ASGNRL
Trigger: CAACCTGTTTCCGGAGGCCAAGTTTGCTGTGGTTCT...GATCCCTAGCAGCTCATCCTGCCCTTTGAATACCCTCACTTTCCAGGCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp AAACTTGGCCTCCGGAAACAGGTTGAAAGTGGCAGTGAGGCTGGCCTTGTAGTGCCCGAAGACAGGACCTaGACAGTGCAGATGAGCACT +
Preference number: 5 (lower is better)
Translates to: KLGLRKQVESGSEAGLVVPEDRT*TVQMST
Trigger: AGTGCTCATCTGCACTGTCAAGGTCCTGTCTTCGGG...CACTACAAGGCCAGCCTCACTGCCACTTTCAACCTGTTTCCGGAGGCCAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS CCA 90 bp CAAGCACCCATACTGTGTGACATGGGGAAAGTGGCTCAACTTCTCTaGGCTGGCAGGAAACCCTTCAGTGGGGTTGGATCACCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: QAPILCDMGKVAQLL*AGRKPFSGVGSPGN
Trigger: ATTTCCAGGTGATCCAACCCCACTGAAGGGTTTCCTGCCAGCCCAGAGAAGTTGAGCCACTTTCCCCATGTCACACAGTATGGGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS-3UTR CAA 90 bp AAGCCGGGACCCCCACCATCAGGAAGTGGTTCTTCTTCCGAAACAATCTCCACAAGAACCACAGCAAACTaGGCCTCCGGAAACAGGTTG +
Preference number: 5 (lower is better)
Translates to: KPGPPPSGSGSSSETISTRTTAN*ASGNRL
Trigger: CAACCTGTTTCCGGAGGCCAAGTTTGCTGTGGTTCT...TGTGGAGATTGTTTCGGAAGAAGAACCACTTCCTGATGGTGGGGGTCCCGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp AAAGGGCAGGATGAGCTGCTAGGGATCGTAATGATTCCCAGGTACTCTCCTGCCTGGACAGTGTCTCTATaGGCAGCTTCCTGGACACAG +
Preference number: 5 (lower is better)
Translates to: KGQDELLGIVMIPRYSPAWTVSL*AASWTQ
Trigger: CTGTGTCCAGGAAGCTGCCAATAGAGACACTGTCCA...GGCAGGAGAGTACCTGGGAATCATTACGATCCCTAGCAGCTCATCCTGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp CTCATAGTAGCCGTCAATGAAAACTGTTATCATCTGAGGAGACACCCCCTGGGCACATTGAGGACCTTGTaGTCTGGGAGTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LIVAVNENCYHLRRHPLGTLRTL*SGSGSG
Trigger: CCCTGACCCACTCCCAGACAACAAGGTCCTCAATGT...GCCCAGGGGGTGTCTCCTCAGATGATAACAGTTTTCATTGACGGCTACTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp CTCATAGTAGCCGTCAATGAAAACTGTTATCATCTGAGGAGACACCCCCTGGGCACAGCCACAGGCACATaGAGGACCTTGTTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LIVAVNENCYHLRRHPLGTATGT*RTLLSG
Trigger: CCCAGACAACAAGGTCCTCAATGTGCCTGTGGCTGT...GCCCAGGGGGTGTCTCCTCAGATGATAACAGTTTTCATTGACGGCTACTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS-3UTR CAA 90 bp CATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCTCTTCACAAGGGTTCTaGCTGTGGTCCAGAACCTCA +
Preference number: 5 (lower is better)
Translates to: HSSPKRNPGPPGSACFQGSSQGF*LWSRTS
Trigger: TGAGGTTCTGGACCACAGCAAGAACCCTTGTGAAGA...GCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp GCATCTACAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACAAGGGGAACCCTCCCCTaGGAGTTAGTAATTAAGTCT +
Preference number: 5 (lower is better)
Translates to: ASTKSYRMEGRASQPGGTRGTLP*ELVIKS
Trigger: AGACTTAATTACTAACTCCAAGGGGAGGGTTCCCCT...TGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTGTAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS TCA 90 bp CAAGCTGGGCTTCGAGGCCCACTGGTTCTGGGAGCAGTGCCAGGATaGTGTGACCTTCTTGTAACAACTATTCCACCCTTTTGTAATCCT +
Preference number: 5 (lower is better)
Translates to: QAGLRGPLVLGAVPG*CDLLVTTIPPFCNP
Trigger: AGGATTACAAAAGGGTGGAATAGTTGTTACAAGAAGGTCACATCATCCTGGCACTGCTCCCAGAACCAGTGGGCCTCGAAGCCCAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS-3UTR CAA 90 bp TCAGGGCAGCATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTGTGTCCAGGATCAACTaGATATTGACAATGACAGTC +
Preference number: 5 (lower is better)
Translates to: SGQHSSPKRNPGPPGSACVSRIN*ILTMTV
Trigger: GACTGTCATTGTCAATATCAAGTTGATCCTGGACAC...ACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAATGCTGCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp CAAAATCCTACAGGATGGAGGGAAGGGCTAGCCAGCCTGGGGGTACACAGTACCGTGTCCAGGATCAACTaGATATTGACAATGACAGTC +
Preference number: 5 (lower is better)
Translates to: QNPTGWREGLASLGVHSTVSRIN*ILTMTV
Trigger: GACTGTCATTGTCAATATCAAGTTGATCCTGGACAC...GGTACTGTGTACCCCCAGGCTGGCTAGCCCTTCCCTCCATCCTGTAGGATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp ATTCCAGCCCAAAAAGAAATCCAGGCCCTCCAGGTTCGGCCTGTTTTCAAGGCCACACCTGGAACCGTGTaGAACTTGTGCTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: IPAQKEIQALQVRPVFKATPGTV*NLCFLK
Trigger: CTTCAAGAAGCACAAGTTCAACACGGTTCCAGGTGT...GGCCTTGAAAACAGGCCGAACCTGGAGGGCCTGGATTTCTTTTTGGGCTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp TTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAAATAGGTTAGATTCTGAGCAGATATGGAGGCACTaGGCAAGCTGGGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FGLFSRPSGQSINRLDSEQIWRH*ASWVQV
Trigger: CACCTGGACCCAGCTTGCCAAGTGCCTCCATATCTG...CTCAGAATCTAACCTATTTATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS-3UTR CAA 90 bp TTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAAATAGGTTAGATTCTGAGCAGCAGCTGGTGACCTaGAATGAGGGCATCGAGGCA +
Preference number: 5 (lower is better)
Translates to: FGLFSRPSGQSINRLDSEQQLVT*NEGIEA
Trigger: TGCCTCGATGCCCTCATTCAAGGTCACCAGCTGCTG...CTCAGAATCTAACCTATTTATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396420.7
CDS CCA 90 bp ATAAGCTTCTTTCTTCAGACTGTCCACATTCCTGAGCTGGACACCTaGAACCGTGTTGAACTTGTGCTTCTTGAAGTAGGCCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: ISFFLQTVHIPELDT*NRVELVLLEVGLLE
Trigger: CTCCAGGAGGCCTACTTCAAGAAGCACAAGTTCAACACGGTTCCAGGTGTCCAGCTCAGGAATGTGGACAGTCTGAAGAAAGAAGCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480972.1
CDS-3UTR CAA 90 bp TTCGGCCTGTTTTCAAGGCCCTCAGGACAGTCAATAAATAGGTTAGATTCTGAGTGTCAAACACACGTTTaGCCATCACGTGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: FGLFSRPSGQSINRLDSECQTHV*PSRGPW
Trigger: CCACGGGCCACGTGATGGCAAAACGTGTGTTTGACA...CTCAGAATCTAACCTATTTATTGACTGTCCTGAGGGCCTTGAAAACAGGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000396420.7
CDS TCA 90 bp CCACACCCACTTGCTGACCAGCCAGACATCTATAAGACACACAAATaGAGTCCTAGACCTGTAAAGAGCCCTCTAATTTCCCACCGTCTT +
Preference number: 5 (lower is better)
Translates to: PHPLADQPDIYKTHK*SPRPVKSPLISHRL
Trigger: AAGACGGTGGGAAATTAGAGGGCTCTTTACAGGTCTAGGACTTCATTTGTGTGTCTTATAGATGTCTGGCTGGTCAGCAAGTGGGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480972.1
ENST00000485714.1
CDS GCA 90 bp CCTGTAAAGAGCCCTCTAATTTCCCACCGTCTTCTCCATCCTCTTTaGAGCATCCTCAGCAAGCTCTTACTAGCTTTAATTTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PVKSPLISHRLLHPL*SILSKLLLALIWPP
Trigger: TGGAGGCCAAATTAAAGCTAGTAAGAGCTTGCTGAGGATGCTGCAAAGAGGATGGAGAAGACGGTGGGAAATTAGAGGGCTCTTTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS GCA 72 bp CCAGCACCTCTACGTCCAGGACCCGCCGGGGACCACTaGCTCTGCGCCGTGGGGGCTCCAGGCGGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: PAPLRPGPAGDH*LCAVGAPGGLG
Trigger: CCCTAGGCCGCCTGGAGCCCCCACGGCGCAGAGGCAGTGGTCCCCGGCGGGTCCTGGACGTAGAGGTGCTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS GCA 72 bp AATACACCTCTACGTCCAGGACCCGCCGGGGACCACTaGCTCTGCGCCGTGGGGGCTCCAGGCGGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: NTPLRPGPAGDH*LCAVGAPGGLG
Trigger: CCCTAGGCCGCCTGGAGCCCCCACGGCGCAGAGGCAGTGGTCCCCGGCGGGTCCTGGACGTAGAGGTGTATT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS GCA 72 bp GCCCAGGCCGCTCAAGGCGAGGCAGCTGGGACAGCCTaGCAGACACCAGCACCACCGACCGGCTGGACAGTG +
Preference number: 6 (lower is better)
Translates to: AQAAQGEAAGTA*QTPAPPTGWTV
Trigger: CACTGTCCAGCCGGTCGGTGGTGCTGGTGTCTGGCAGGCTGTCCCAGCTGCCTCGCCTTGAGCGGCCTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CAA 90 bp CAGCTGGTGACCTTGAATGAGGGCATCGAGGCAGTGCGCTGGCTGTaGGAGGAGCGGGGGACGTTGACCAGTCATTGCAGCAGCCTCACC +
Preference number: 6 (lower is better)
Translates to: QLVTLNEGIEAVRWL*EERGTLTSHCSSLT
Trigger: GGTGAGGCTGCTGCAATGACTGGTCAACGTCCCCCGCTCCTCCAACAGCCAGCGCACTGCCTCGATGCCCTCATTCAAGGTCACCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS TCA 72 bp GTCATTGCAGCAGCCTCACCAGCAGTCAATATAGCCTaGCAGGCGGGAGCCCAGGCCGCTCAAGGCGAGGCA +
Preference number: 6 (lower is better)
Translates to: VIAAASPAVNIA*QAGAQAAQGEA
Trigger: TGCCTCGCCTTGAGCGGCCTGGGCTCCCGCCTGTCAGGCTATATTGACTGCTGGTGAGGCTGCTGCAATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 72 bp GACCACCTGAGTCACCAGAGGATGAGAGTGCCAAGCTaGGCTTCGAGGCCCACTGGTTCTGGGAGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: DHLSHQRMRVPS*ASRPTGSGSSA
Trigger: GGCACTGCTCCCAGAACCAGTGGGCCTCGAAGCCCAGCTTGGCACTCTCATCCTCTGGTGACTCAGGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 72 bp CAGGGCCCACCTGGGGCTCCACGTTCCGAGATGGACTaGGCAAAAGTTATAGCTGGTGGAGAGAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: QGPPGAPRSEMD*AKVIAGGERAR
Trigger: CCTGGCCCTCTCTCCACCAGCTATAACTTTTGCCCAGTCCATCTCGGAACGTGGAGCCCCAGGTGGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 72 bp GGGACAGCCTGCCAGACACCAGCACCACCGACCGGCTaGACAGTGTCTCTATTGGCAGCTTCCTGGACACAG +
Preference number: 6 (lower is better)
Translates to: GTACQTPAPPTG*TVSLLAASWTQ
Trigger: CTGTGTCCAGGAAGCTGCCAATAGAGACACTGTCCAGCCGGTCGGTGGTGCTGGTGTCTGGCAGGCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CAA 72 bp GATGAGGGGGCTGGGCTTCCAGTCGTCCATACCGGATaGGCGGGTCACCAATGTCCTGGCCAGCCCATGACT +
Preference number: 6 (lower is better)
Translates to: DEGAGLPVVHTG*AGHQCPGQPMT
Trigger: AGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACTGGAAGCCCAGCCCCCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000489985.1
ENST00000497439.5
CDS CAA 72 bp AGGTACCAGCTCCGCTTCTTCCGAGCCCCAAAGGGCTaGATGAGGGGGCTGGGCTTCCAGTCGTCCATACCG +
Preference number: 6 (lower is better)
Translates to: RYQLRFFRAPKG*MRGLGFQSSIP
Trigger: CGGTATGGACGACTGGAAGCCCAGCCCCCTCATCAAGCCCTTTGGGGCTCGGAAGAAGCGGAGCTGGTACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000489985.1
ENST00000497439.5
CDS CAA 90 bp TTCCAGGTAAGGTACCAGCTCCGCTTCTTCCGAGCCCCAAAGGGCTaGATGAGGGGGCTGGGCTTCCAGTCGTCCATACCGGATTGGCGG +
Preference number: 6 (lower is better)
Translates to: FQVRYQLRFFRAPKG*MRGLGFQSSIPDWR
Trigger: CCGCCAATCCGGTATGGACGACTGGAAGCCCAGCCCCCTCATCAAGCCCTTTGGGGCTCGGAAGAAGCGGAGCTGGTACCTTACCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000489985.1
ENST00000497439.5
CDS CCA 72 bp GGCTGGCTCAAGGCCTCCCTTGCTGTAACTGGGGAATaGTCCTCTGAATGCAGCCAGGTGGGTTGGCGGTAC +
Preference number: 6 (lower is better)
Translates to: GWLKASLAVTGE*SSECSQVGWRY
Trigger: GTACCGCCAACCCACCTGGCTGCATTCAGAGGACCATTCCCCAGTTACAGCAAGGGAGGCCTTGAGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CAA 72 bp ACCTTGAATGAGGGCATCGAGGCAGTGCGCTGGCTGTaGGAGGAGCGGGGGACGTTGACCAGTCATTGCAGC +
Preference number: 6 (lower is better)
Translates to: TLNEGIEAVRWL*EERGTLTSHCS
Trigger: GCTGCAATGACTGGTCAACGTCCCCCGCTCCTCCAACAGCCAGCGCACTGCCTCGATGCCCTCATTCAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CAA 90 bp CCAGCACCGTGGTGCCATCCACTGCCACATATACTTTGCTGCGACTaGAATACACCTCTACGTCCAGGACCCGCCGGGGACCACTGCCTC +
Preference number: 6 (lower is better)
Translates to: PAPWCHPLPHILCCD*NTPLRPGPAGDHCL
Trigger: GAGGCAGTGGTCCCCGGCGGGTCCTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAGTGGATGGCACCACGGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS CCA 72 bp GAGGATGAGAGTGCCAAGCTGGGCTTCGAGGCCCACTaGTTCTGGGAGCAGTGCCAGGATGATGTGACCTTC +
Preference number: 6 (lower is better)
Translates to: EDESAKLGFEAH*FWEQCQDDVTF
Trigger: GAAGGTCACATCATCCTGGCACTGCTCCCAGAACCAGTGGGCCTCGAAGCCCAGCTTGGCACTCTCATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 72 bp AGTCGTCCATACCGGATTGGCGGGTCACCAATGTCCTaGCCAGCCCATGACTTCAGGAATCTGCACCGGCAG +
Preference number: 6 (lower is better)
Translates to: SRPYRIGGSPMS*PAHDFRNLHRQ
Trigger: CTGCCGGTGCAGATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497439.5
CDS CAA 90 bp AAAGGGCTTGATGAGGGGGCTGGGCTTCCAGTCGTCCATACCGGATaGGCGGGTCACCAATGTCCTGGCCAGCCCATGACTTCAGGAATG +
Preference number: 6 (lower is better)
Translates to: KGLDEGAGLPVVHTG*AGHQCPGQPMTSGM
Trigger: CATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACTGGAAGCCCAGCCCCCTCATCAAGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371984.8
CDS CAA 90 bp GCCTCATCCTCCAGCACCGTGGTGCCATCCACTGCCACATATACTTaGCTGCGACTTGAATACACCTCTACGTCCAGGACCCGCCGGGGA +
Preference number: 6 (lower is better)
Translates to: ASSSSTVVPSTATYT*LRLEYTSTSRTRRG
Trigger: TCCCCGGCGGGTCCTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAGTGGATGGCACCACGGTGCTGGAGGATGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS CAA 90 bp AATCTGCGAGCCATCGATGTGAAGATCCTGCAGCAGCTGGTGACCTaGAATGAGGGCATCGAGGCAGTGCGCTGGCTGTTGGAGGAGCGG +
Preference number: 6 (lower is better)
Translates to: NLRAIDVKILQQLVT*NEGIEAVRWLLEER
Trigger: CCGCTCCTCCAACAGCCAGCGCACTGCCTCGATGCCCTCATTCAAGGTCACCAGCTGCTGCAGGATCTTCACATCGATGGCTCGCAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CAA 90 bp AAAGGGCTTGATGAGGGGGCTGGGCTTCCAGTCGTCCATACCGGATaGGCGGGTCACCAATGTCCTGGCCAGCCCATGACTTCAGGAATC +
Preference number: 6 (lower is better)
Translates to: KGLDEGAGLPVVHTG*AGHQCPGQPMTSGI
Trigger: GATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACTGGAAGCCCAGCCCCCTCATCAAGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371992.1
ENST00000396420.7
ENST00000489985.1
ENST00000497439.5
CDS TCA 72 bp GGTGCCATCCACTGCCACATATACTTTGCTGCGACTTaGATACACCTCTACGTCCAGGACCCGCCGGGGACC +
Preference number: 6 (lower is better)
Translates to: GAIHCHIYFAAT*IHLYVQDPPGT
Trigger: GGTCCCCGGCGGGTCCTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAGTGGATGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS TCA 72 bp GGCAAAAGTTATAGCTGGTGGAGAGAGGGCCAGGACTaGGGTGGATGTGGCAGCCACCAGGCTAGGGAGCTT +
Preference number: 6 (lower is better)
Translates to: GKSYSWWREGQD*GGCGSHQAREL
Trigger: AAGCTCCCTAGCCTGGTGGCTGCCACATCCACCTCAGTCCTGGCCCTCTCTCCACCAGCTATAACTTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS TCA 72 bp CGATGTGAAGATCCTGCAGCAGCTGGTGACCTTGAATaGGGGCATCGAGGCAGTGCGCTGGCTGTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: RCEDPAAAGDLE*GHRGSALAVGG
Trigger: TCCTCCAACAGCCAGCGCACTGCCTCGATGCCCTCATTCAAGGTCACCAGCTGCTGCAGGATCTTCACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS GCA 72 bp GCCTCCCTTGCTGTAACTGGGGAATGGTCCTCTGAATaGAGCCAGGTGGGTTGGCGGTACCTAAGGACTTCC +
Preference number: 6 (lower is better)
Translates to: ASLAVTGEWSSE*SQVGWRYLRTS
Trigger: GGAAGTCCTTAGGTACCGCCAACCCACCTGGCTGCATTCAGAGGACCATTCCCCAGTTACAGCAAGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 72 bp AGTCGTCCATACCGGATTGGCGGGTCACCAATGTCCTaGCCAGCCCATGACTTCAGGAATCTGCGAGCCATC +
Preference number: 6 (lower is better)
Translates to: SRPYRIGGSPMS*PAHDFRNLRAI
Trigger: GATGGCTCGCAGATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS CCA 72 bp ACTGGGGAATGGTCCTCTGAATGCAGCCAGGTGGGTTaGCGGTACCTAAGGACTTCCCTGTTCTCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: TGEWSSECSQVG*RYLRTSLFSSG
Trigger: GCCTGAGGAGAACAGGGAAGTCCTTAGGTACCGCCAACCCACCTGGCTGCATTCAGAGGACCATTCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS TCA 72 bp CCGGATTGGCGGGTCACCAATGTCCTGGCCAGCCCATaGCTTCAGGAATCTGCGAGCCATCGATGTGAAGAT +
Preference number: 6 (lower is better)
Translates to: PDWRVTNVLASP*LQESASHRCED
Trigger: ATCTTCACATCGATGGCTCGCAGATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS GCA 72 bp CTAGCAGTCCCTGCCTCTTGTAGTTCTCCCTGGGCCTaGTGTTCTAGAGCCACAGATGTCAGAAACAGGCCC +
Preference number: 6 (lower is better)
Translates to: LAVPASCSSPWA*CSRATDVRNRP
Trigger: GGGCCTGTTTCTGACATCTGTGGCTCTAGAACAGCAGGCCCAGGGAGAACTACAAGAGGCAGGGACTGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 72 bp CCTGCTGCCAGCCCCAACCTGTCCACATTCCTGAGCTaGACACCTGGAACCGTGTTGAACTTGTGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PAASPNLSTFLS*TPGTVLNLCFL
Trigger: CAAGAAGCACAAGTTCAACACGGTTCCAGGTGTCCAGCTCAGGAATGTGGACAGGTTGGGGCTGGCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 72 bp AGTCGTCCATACCGGATTGGCGGGTCACCAATGTCCTaGCCAGCCCATGACTTCAGGAATCTGAAGGGACCA +
Preference number: 6 (lower is better)
Translates to: SRPYRIGGSPMS*PAHDFRNLKGP
Trigger: TGGTCCCTTCAGATTCCTGAAGTCATGGGCTGGCCAGGACATTGGTGACCCGCCAATCCGGTATGGACGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS CAA 72 bp TGGTGCCATCCACTGCCACATATACTTTGCTGCGACTaGAATACACCTCTACGTCCAGGACCCGCCGGGGAC +
Preference number: 6 (lower is better)
Translates to: WCHPLPHILCCD*NTPLRPGPAGD
Trigger: GTCCCCGGCGGGTCCTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAGTGGATGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS GCA 72 bp CCAGCACCGTGGTGCCATCCACTGCCACATATACTTTaGTGCGACTTGAATACACCTCTACGTCCAGGACCC +
Preference number: 6 (lower is better)
Translates to: PAPWCHPLPHIL*CDLNTPLRPGP
Trigger: GGGTCCTGGACGTAGAGGTGTATTCAAGTCGCAGCAAAGTATATGTGGCAGTGGATGGCACCACGGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000497439.5
CDS GCA 72 bp GAATCTGAAGGGACCAGAGGGCCACATGGGGTAAGATaGTCCTCCCAAAGTCTGATGCCTTCTGGGGAGATG +
Preference number: 6 (lower is better)
Translates to: ESEGTRGPHGVR*SSQSLMPSGEM
Trigger: CATCTCCCCAGAAGGCATCAGACTTTGGGAGGAGCATCTTACCCCATGTGGCCCTCTGGTCCCTTCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS CCA 72 bp TCTAGGAGGTTCCAAGCTGGACGCTATTCATTCCTTTaGGCTGGGCTGGCTCAAGGCCTCCCTTGCTGTAAC +
Preference number: 6 (lower is better)
Translates to: SRRFQAGRYSFL*AGLAQGLPCCN
Trigger: GTTACAGCAAGGGAGGCCTTGAGCCAGCCCAGCCCAAAGGAATGAATAGCGTCCAGCTTGGAACCTCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 72 bp TGGGGCTCGCGTATTAGTCAGCCTCTGAGGGACCTCTaGCTTCTAGGAGGTTCCAAGCTGGACGCTATTCAT +
Preference number: 6 (lower is better)
Translates to: WGSRISQPLRDL*LLGGSKLDAIH
Trigger: ATGAATAGCGTCCAGCTTGGAACCTCCTAGAAGCCAGAGGTCCCTCAGAGGCTGACTAATACGCGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS TCA 72 bp CCTGCCTCCCACTCACGTGAAAGTAGCCATTCATGTTaGGGCCGACGATGCCAAAGTGGTAGGATCGGGAAA +
Preference number: 6 (lower is better)
Translates to: PASHSRESSHSC*GRRCQSGRIGK
Trigger: TTTCCCGATCCTACCACTTTGGCATCGTCGGCCTCAACATGAATGGCTACTTTCACGTGAGTGGGAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463030.1
ENST00000485714.1
CDS GCA 72 bp GCGCAGCATCCTGTACAGGTAATTGGGTCGGTTCCCTaGAATGACAGCCACAGGCACATTGAGGACCTTGTT +
Preference number: 6 (lower is better)
Translates to: AQHPVQVIGSVP*NDSHRHIEDLV
Trigger: AACAAGGTCCTCAATGTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAATTACCTGTACAGGATGCTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371984.8
ENST00000371992.1
CDS GCA 72 bp GCTTTAATTTGGCCTCCACCATTGCTGGAGAGCTCATaGTGTCACGGCAGCTCACACTACTGCACCACAGAC +
Preference number: 6 (lower is better)
Translates to: ALIWPPPLLESS*CHGSSHYCTTD
Trigger: GTCTGTGGTGCAGTAGTGTGAGCTGCCGTGACAGCATGAGCTCTCCAGCAATGGTGGAGGCCAAATTAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CAA 72 bp TGGAGTGGGTATGAGAGTGAAAATCAGCACCTCACATaGTCTGGCCCACACCCACTTGCTGACCAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: WSGYESENQHLT*SGPHPLADQPD
Trigger: GTCTGGCTGGTCAGCAAGTGGGTGTGGGCCAGACAATGTGAGGTGCTGATTTTCACTCTCATACCCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480972.1
ENST00000485714.1
CDS TCA 72 bp TGGCGGTACCTAAGGACTTCCCTGTTCTCCTCAGGCTaGAGCATAGGCTCCAGCACTTGCCAAAACAGGAAA +
Preference number: 6 (lower is better)
Translates to: WRYLRTSLFSSG*SIGSSTCQNRK
Trigger: TTTCCTGTTTTGGCAAGTGCTGGAGCCTATGCTTCAGCCTGAGGAGAACAGGGAAGTCCTTAGGTACCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 72 bp CATGAACTAGCAGTCCCTGCCTCTTGTAGTTCTCCCTaGGCCTGCTGTTCTAGAGCCACAGATGTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: HELAVPASCSSP*ACCSRATDVRN
Trigger: GTTTCTGACATCTGTGGCTCTAGAACAGCAGGCCCAGGGAGAACTACAAGAGGCAGGGACTGCTAGTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CCA 72 bp ATACTGTGTGACATGGGGAAAGTGGCTCAACTTCTCTaGGCTGGCAGGAAACCCTTCAGTGGGGTTGGATCA +
Preference number: 6 (lower is better)
Translates to: ILCDMGKVAQLL*AGRKPFSGVGS
Trigger: TGATCCAACCCCACTGAAGGGTTTCCTGCCAGCCCAGAGAAGTTGAGCCACTTTCCCCATGTCACACAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS CAA 90 bp TGGCTAGCAAGTAGCAGAGCTAAGATTGCTTCAGAGTCCATGTTCTaGTTCTTGACTGTCATGCCACACTGTGCCCTGCTCCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: WLASSRAKIASESMF*FLTVMPHCALLPAS
Trigger: GGAGGCAGGGAGCAGGGCACAGTGTGGCATGACAGTCAAGAACAAGAACATGGACTCTGAAGCAATCTTAGCTCTGCTACTTGCTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463030.1
ENST00000485714.1
CDS CAA 90 bp AGCATCCTCAGCAAGCTCTTACTAGCTTTAATTTGGCCTCCACCATaGCTGGAGAGCTCATGCTGTCACGGCAGCTCACACTACTGCACC +
Preference number: 6 (lower is better)
Translates to: SILSKLLLALIWPPP*LESSCCHGSSHYCT
Trigger: GGTGCAGTAGTGTGAGCTGCCGTGACAGCATGAGCTCTCCAGCAATGGTGGAGGCCAAATTAAAGCTAGTAAGAGCTTGCTGAGGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CAA 90 bp TCTTCATTGGCTTCACTGATGGCTCGCCGAGTGTCCAGGATCAACTaGATATTGACAATGACAGTCACCAGCAGGAAAAGCACGGCCCCT +
Preference number: 6 (lower is better)
Translates to: SSLASLMARRVSRIN*ILTMTVTSRKSTAP
Trigger: AGGGGCCGTGCTTTTCCTGCTGGTGACTGTCATTGTCAATATCAAGTTGATCCTGGACACTCGGCGAGCCATCAGTGAAGCCAATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000489985.1
ENST00000497439.5
CDS TCA 72 bp CTTCGAGGCCCACTGGTTCTGGGAGCAGTGCCAGGATaGTGTGACCTTCTTGTAACAACTATTCCACCCTTT +
Preference number: 6 (lower is better)
Translates to: LRGPLVLGAVPG*CDLLVTTIPPF
Trigger: AAAGGGTGGAATAGTTGTTACAAGAAGGTCACATCATCCTGGCACTGCTCCCAGAACCAGTGGGCCTCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371992.1
ENST00000396420.7
CDS TCA 72 bp GCTCCCTGCTACACCCCAATTGTCCTAGGCCATACCTaGGCAGCCTGTGAACTTCCACTTCATAAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: APCYTPIVLGHT*AACELPLHKLL
Trigger: AAGAAGCTTATGAAGTGGAAGTTCACAGGCTGCTCAGGTATGGCCTAGGACAATTGGGGTGTAGCAGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS GCA 72 bp GCTCCAGCACTTGCCAAAACAGGAAAGGGCAGAGATTaGAGGGCTGGACCAGTACTTAGAGGCAGAAATACT +
Preference number: 6 (lower is better)
Translates to: APALAKTGKGRD*RAGPVLRGRNT
Trigger: AGTATTTCTGCCTCTAAGTACTGGTCCAGCCCTGCAATCTCTGCCCTTTCCTGTTTTGGCAAGTGCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CAA 72 bp AGAGCTAAGATTGCTTCAGAGTCCATGTTCTTGTTCTaGACTGTCATGCCACACTGTGCCCTGCTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: RAKIASESMFLF*TVMPHCALLPA
Trigger: GGCAGGGAGCAGGGCACAGTGTGGCATGACAGTCAAGAACAAGAACATGGACTCTGAAGCAATCTTAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463030.1
ENST00000485714.1
CDS CAA 72 bp AGCAAGCTCTTACTAGCTTTAATTTGGCCTCCACCATaGCTGGAGAGCTCATGCTGTCACGGCAGCTCACAC +
Preference number: 6 (lower is better)
Translates to: SKLLLALIWPPP*LESSCCHGSSH
Trigger: GTGTGAGCTGCCGTGACAGCATGAGCTCTCCAGCAATGGTGGAGGCCAAATTAAAGCTAGTAAGAGCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CAA 72 bp GCTTCACTGATGGCTCGCCGAGTGTCCAGGATCAACTaGATATTGACAATGACAGTCACCAGCAGGAAAAGC +
Preference number: 6 (lower is better)
Translates to: ASLMARRVSRIN*ILTMTVTSRKS
Trigger: GCTTTTCCTGCTGGTGACTGTCATTGTCAATATCAAGTTGATCCTGGACACTCGGCGAGCCATCAGTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000489985.1
ENST00000497439.5
CDS TCA 72 bp ACCATGTTGAGGAATAGCACCATGGCCTCATCCTCATaGGGTGAGTACGTGTCAAACACACGTTTTGCCATC +
Preference number: 6 (lower is better)
Translates to: TMLRNSTMASSS*GEYVSNTRFAI
Trigger: GATGGCAAAACGTGTGTTTGACACGTACTCACCTCATGAGGATGAGGCCATGGTGCTATTCCTCAACATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371984.8
ENST00000371992.1
ENST00000396420.7
ENST00000489985.1
ENST00000497439.5
CDS CAA 72 bp AGTAGCAGAGCTAAGATTGCTTCAGAGTCCATGTTCTaGTTCTTGACTGTCATGCCACACTGTGCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: SSRAKIASESMF*FLTVMPHCALL
Trigger: GAGCAGGGCACAGTGTGGCATGACAGTCAAGAACAAGAACATGGACTCTGAAGCAATCTTAGCTCTGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463030.1
ENST00000485714.1
CDS CAA 72 bp TTGCAGCATCCTCAGCAAGCTCTTACTAGCTTTAATTaGGCCTCCACCATTGCTGGAGAGCTCATGCTGTCA +
Preference number: 6 (lower is better)
Translates to: LQHPQQALTSFN*ASTIAGELMLS
Trigger: TGACAGCATGAGCTCTCCAGCAATGGTGGAGGCCAAATTAAAGCTAGTAAGAGCTTGCTGAGGATGCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CAA 90 bp ACCTGTAAAGAGCCCTCTAATTTCCCACCGTCTTCTCCATCCTCTTaGCAGCATCCTCAGCAAGCTCTTACTAGCTTTAATTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: TCKEPSNFPPSSPSS*QHPQQALTSFNLAS
Trigger: GGAGGCCAAATTAAAGCTAGTAAGAGCTTGCTGAGGATGCTGCAAAGAGGATGGAGAAGACGGTGGGAAATTAGAGGGCTCTTTACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485714.1
CDS CAA 90 bp ATGAGAGTGAAAATCAGCACCTCACATTGTCTGGCCCACACCCACTaGCTGACCAGCCAGACATCTATAAGACACACAAATGAAGTCCTA +
Preference number: 6 (lower is better)
Translates to: MRVKISTSHCLAHTH*LTSQTSIRHTNEVL
Trigger: TAGGACTTCATTTGTGTGTCTTATAGATGTCTGGCTGGTCAGCAAGTGGGTGTGGGCCAGACAATGTGAGGTGCTGATTTTCACTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480972.1
ENST00000485714.1
CDS CAA 72 bp GAGCCCTCTAATTTCCCACCGTCTTCTCCATCCTCTTaGCAGCATCCTCAGCAAGCTCTTACTAGCTTTAAT +
Preference number: 6 (lower is better)
Translates to: EPSNFPPSSPSS*QHPQQALTSFN
Trigger: ATTAAAGCTAGTAAGAGCTTGCTGAGGATGCTGCAAAGAGGATGGAGAAGACGGTGGGAAATTAGAGGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480972.1
ENST00000485714.1
CDS CAA 72 bp AAAATCAGCACCTCACATTGTCTGGCCCACACCCACTaGCTGACCAGCCAGACATCTATAAGACACACAAAT +
Preference number: 6 (lower is better)
Translates to: KISTSHCLAHTH*LTSQTSIRHTN
Trigger: ATTTGTGTGTCTTATAGATGTCTGGCTGGTCAGCAAGTGGGTGTGGGCCAGACAATGTGAGGTGCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480972.1
ENST00000485714.1
CDS CAA 90 bp AGTTATCATTTACTAGCATTATCCACATTTACTTGGCTGTTTCTGTaGACCTCCCACTGCTGGAATATAAGCTCCATGAGGGTGGGGACT +
Preference number: 6 (lower is better)
Translates to: SYHLLALSTFTWLFL*TSHCWNISSMRVGT
Trigger: AGTCCCCACCCTCATGGAGCTTATATTCCAGCAGTGGGAGGTCAACAGAAACAGCCAAGTAAATGTGGATAATGCTAGTAAATGATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489985.1
CDS CAA 72 bp TTACTAGCATTATCCACATTTACTTGGCTGTTTCTGTaGACCTCCCACTGCTGGAATATAAGCTCCATGAGG +
Preference number: 6 (lower is better)
Translates to: LLALSTFTWLFL*TSHCWNISSMR
Trigger: CCTCATGGAGCTTATATTCCAGCAGTGGGAGGTCAACAGAAACAGCCAAGTAAATGTGGATAATGCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489985.1