RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLRMT (Homo sapiens)

Ensembl gene IDs: ENSG00000099821

Ensembl transcript IDs: ENST00000587057.5, ENST00000590709.3, ENST00000592863.2

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGACTGCACGGAGGAGCCTCAGTCGAAAAGCGGGCAAGGGCGAGTaGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCCAGGTGCAA +
Preference number: 1 (lower is better)
Translates to: QTARRSLSRKAGKGE*KAGPGRWAAHAQVQ
Trigger: TTGCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGCTTTTCGACTGAGGCTCCTCCGTGCAGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
3UTR CCA 72 bp CGGAGGAGCCTCAGTCGAAAAGCGGGCAAGGGCGAGTaGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCC +
Preference number: 3 (lower is better)
Translates to: RRSLSRKAGKGE*KAGPGRWAAHA
Trigger: GGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGCTTTTCGACTGAGGCTCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
3UTR GCA 72 bp CAGACGCCACCGGCGGTCCACCTGGGGTCAGGAGGCTaGATAAGAAACCACGAGTCAAAGGTCAGACTGCAC +
Preference number: 3 (lower is better)
Translates to: QTPPAVHLGSGG*IRNHESKVRLH
Trigger: GTGCAGTCTGACCTTTGACTCGTGGTTTCTTATGCAGCCTCCTGACCCCAGGTGGACCGCCGGTGGCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR CCA 90 bp AAAGCGGGCAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCTGCCGCACCCGCGCCTaGAGCACCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KAGKGEWKAGPGRWAAHACRTRA*STSSSS
Trigger: GGAGCTGCTGGAGGTGCTCCAGGCGCGGGTGCGGCA...GGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGCTTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR GCA 90 bp AAAGCGGGCAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCGCGGCCCCAGCAAAGTaGCGACATTACGCACGCCGC +
Preference number: 4 (lower is better)
Translates to: KAGKGEWKAGPGRWAAHAAAPAK*RHYARR
Trigger: GCGGCGTGCGTAATGTCGGCACTTTGCTGGGGCCGC...GGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR CCA 90 bp AAAGCGGGCAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCGGCCCCCGGGCTGCCTaGCCGTCTCCCTTTGTGTTA +
Preference number: 4 (lower is better)
Translates to: KAGKGEWKAGPGRWAAHAGPRAA*PSPFVL
Trigger: TAACACAAAGGGAGACGGCCAGGCAGCCCGGGGGCC...GGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGCTTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR GCA 90 bp GCAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCCAGGTGCCTGCGCACGCCCAGGTaGAAAGAGGCAAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: ARASGKRGRVGGLRTPRCLRTPR*KEAKVK
Trigger: TTTGACCTTTGCCTCTTTGCACCTGGGCGTGCGCAG...GCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR GCA 90 bp GCAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCCAGGTGCAGTCAAAGGTCAGACTaGACGGAGGAGCCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: ARASGKRGRVGGLRTPRCSQRSD*TEEPQS
Trigger: CGACTGAGGCTCCTCCGTGCAGTCTGACCTTTGACT...GCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR CCA 90 bp AAGGTCAGACTGCACGGAGGAGCCTCAGTCGAAAAGCGGGCAAGGGCGAGTGGAGCGGGCAAGGGCGAGTaGAAAGCGGGGCCGGGTCGG +
Preference number: 4 (lower is better)
Translates to: KVRLHGGASVEKRARASGAGKGE*KAGPGR
Trigger: CCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGC...TCCACTCGCCCTTGCCCGCTTTTCGACTGAGGCTCCTCCGTGCAGTCTGACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR GCA 90 bp GAGTCAAAGGTCAGACTGCACGGAGGAGCCTCAGTCGAAAAGCGGGCAAGGGCGCCGTGGCCCCCGGGCTaGCTGGCCGTCTCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: ESKVRLHGGASVEKRARAPWPPG*LAVSLC
Trigger: ACAAAGGGAGACGGCCAGGCAGCCCGGGGGCCACGG...CGCCCTTGCCCGCTTTTCGACTGAGGCTCCTCCGTGCAGTCTGACCTTTGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR GCA 90 bp AAGGTCAGACTGCACGGAGGAGCCTCAGTCGAAAAGCGGGCAAGGGCGAGTGGAGCCGGGTCGGTGGGCTaGGCACGCCCAGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KVRLHGGASVEKRARASGAGSVG*ARPGAK
Trigger: CTTTGCACCTGGGCGTGCGCAGCCCACCGACCCGGC...TCCACTCGCCCTTGCCCGCTTTTCGACTGAGGCTCCTCCGTGCAGTCTGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS-3UTR GCA 90 bp GGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCCAGGTGCAAAGAGGCAAAGCTGGGGTCAGGAGGCTaGATAAGAAACCACGAGTCA +
Preference number: 4 (lower is better)
Translates to: GKRGRVGGLRTPRCKEAKLGSGG*IRNHES
Trigger: TGACTCGTGGTTTCTTATGCAGCCTCCTGACCCCAG...CTTTGCCTCTTTGCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS GCA 90 bp GCGAGTGGAAAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCCAGGTaGAAAGAGGCAAAGGTCAAAGCGCCAAAGGCCCCGGCCGCGCGG +
Preference number: 5 (lower is better)
Translates to: ASGKRGRVGGLRTPR*KEAKVKAPKAPAAR
Trigger: CCGCGCGGCCGGGGCCTTTGGCGCTTTGACCTTTGCCTCTTTGCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS CCA 90 bp AGACCCAGCCTTGCCAGCTGTGCCCTGCTAGCCAGAAGACGCCCCTaGGAGGCGAGCGGCACCCACGCCGTCCGGAGACGCCCACCTGTA +
Preference number: 5 (lower is better)
Translates to: RPSLASCALLARRRP*EASGTHAVRRRPPV
Trigger: TACAGGTGGGCGTCTCCGGACGGCGTGGGTGCCGCTCGCCTCCCAGGGGCGTCTTCTGGCTAGCAGGGCACAGCTGGCAAGGCTGGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS TCA 90 bp GGCGGCTACGAGGTCCCCTCCTGCCAGGGCCACCACCCCGCATCCTaGGCATTCCCAGCTCCCGTGGCCGGTAGATTCTGCTGGAACGAC +
Preference number: 5 (lower is better)
Translates to: GGYEVPSCQGHHPAS*AFPAPVAGRFCWND
Trigger: GTCGTTCCAGCAGAATCTACCGGCCACGGGAGCTGGGAATGCTCAGGATGCGGGGTGGTGGCCCTGGCAGGAGGGGACCTCGTAGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS GCA 90 bp CAGCGCCCATGCTCGGCTCTCCCTGTCGGGCCACAGGAGGGGAGCTaGCAGGACCACCTACATTCGGGGCACACAGCCTCAGGGCCTCTA +
Preference number: 5 (lower is better)
Translates to: QRPCSALPVGPQEGS*QDHLHSGHTASGPL
Trigger: TAGAGGCCCTGAGGCTGTGTGCCCCGAATGTAGGTGGTCCTGGCAGCTCCCCTCCTGTGGCCCGACAGGGAGAGCCGAGCATGGGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS CCA 90 bp AGTCGAAAAGCGGGCAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTaGGCTGCGCACGCCCAGGTGCAAAGAGGCAAAGGTCAAAGCGCC +
Preference number: 5 (lower is better)
Translates to: SRKAGKGEWKAGPGR*AAHAQVQRGKGQSA
Trigger: GGCGCTTTGACCTTTGCCTCTTTGCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGCTTTTCGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS GCA 90 bp AAAAGCGGGCAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTGGGCTaGGCACGCCCAGGTGCAAAGAGGCAAAGGTCAAAGCGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: KSGQGRVESGAGSVG*ARPGAKRQRSKRQR
Trigger: CCTTTGGCGCTTTGACCTTTGCCTCTTTGCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS CCA 90 bp CCTGCCAGGGCCACCACCCCGCATCCTGAGCATTCCCAGCTCCCGTaGCCGGTAGATTCTGCTGGAACGACCTCCACGTGCTCCAGATCT +
Preference number: 5 (lower is better)
Translates to: PARATTPHPEHSQLP*PVDSAGTTSTCSRS
Trigger: AGATCTGGAGCACGTGGAGGTCGTTCCAGCAGAATCTACCGGCCACGGGAGCTGGGAATGCTCAGGATGCGGGGTGGTGGCCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS GCA 90 bp CCTCCACGTGCTCCAGATCTAACCACACATCGCGGTGCCAAGAAATaGCCAGCAGGAAGGGGCAGCGCCCATGCTCGGCTCTCCCTGTCG +
Preference number: 5 (lower is better)
Translates to: PPRAPDLTTHRGAKK*PAGRGSAHARLSLS
Trigger: CGACAGGGAGAGCCGAGCATGGGCGCTGCCCCTTCCTGCTGGGCATTTCTTGGCACCGCGATGTGTGGTTAGATCTGGAGCACGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS GCA 90 bp GCTGGAACGACCTCCACGTGCTCCAGATCTAACCACACATCGCGGTaGCAAGAAATGCCCAGCAGGAAGGGGCAGCGCCCATGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: AGTTSTCSRSNHTSR*QEMPSRKGQRPCSA
Trigger: AGCCGAGCATGGGCGCTGCCCCTTCCTGCTGGGCATTTCTTGGCACCGCGATGTGTGGTTAGATCTGGAGCACGTGGAGGTCGTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS GCA 90 bp TCCCAGCTCCCGTGGCCGGTAGATTCTGCTGGAACGACCTCCACGTaGTCCAGATCTAACCACACATCGCGGTGCCAAGAAATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SQLPWPVDSAGTTST*SRSNHTSRCQEMPS
Trigger: GCTGGGCATTTCTTGGCACCGCGATGTGTGGTTAGATCTGGAGCACGTGGAGGTCGTTCCAGCAGAATCTACCGGCCACGGGAGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS-3UTR CAA 90 bp AAGGTCAGACTGCACGGAGGAGCCTCAGTCGAAAAGCGGGCAAGGGCGAGTGGACCTGGCCGTCTCCCTTaGTGTTACCTTCTTTGCCGG +
Preference number: 5 (lower is better)
Translates to: KVRLHGGASVEKRARASGPGRLP*CYLLCR
Trigger: CCGGCAAAGAAGGTAACACAAAGGGAGACGGCCAGG...TCCACTCGCCCTTGCCCGCTTTTCGACTGAGGCTCCTCCGTGCAGTCTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS GCA 72 bp CCGCGCGGGGAGGAGCCCACGCCGTGGCCCCCGGGCTaGCTGGCCGTCTCCCTTTGTGTTACCTTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: PRGEEPTPWPPG*LAVSLCVTFFA
Trigger: GGCAAAGAAGGTAACACAAAGGGAGACGGCCAGGCAGCCCGGGGGCCACGGCGTGGGCTCCTCCCCGCGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS CCA 72 bp CTTGCCAGCTGTGCCCTGCTAGCCAGAAGACGCCCCTaGGAGGCGAGCGGCACCCACGCCGTCCGGAGACGC +
Preference number: 6 (lower is better)
Translates to: LASCALLARRRP*EASGTHAVRRR
Trigger: GCGTCTCCGGACGGCGTGGGTGCCGCTCGCCTCCCAGGGGCGTCTTCTGGCTAGCAGGGCACAGCTGGCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS CCA 72 bp GCGGGCAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTaGGCTGCGCACGCCCAGGTGCAAAGAGGCAAAGGT +
Preference number: 6 (lower is better)
Translates to: AGKGEWKAGPGR*AAHAQVQRGKG
Trigger: ACCTTTGCCTCTTTGCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS GCA 72 bp AAGCGGGGCCGGGTCGGTGGGCTGCGCACGCCCAGGTaGAAAGAGGCAAAGGTCAAAGCGCCAAAGGCCCCG +
Preference number: 6 (lower is better)
Translates to: KRGRVGGLRTPR*KEAKVKAPKAP
Trigger: CGGGGCCTTTGGCGCTTTGACCTTTGCCTCTTTGCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS GCA 72 bp TGCCAAGAAATGCCCAGCAGGAAGGGGCAGCGCCCATaGTCGGCTCTCCCTGTCGGGCCACAGGAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: CQEMPSRKGQRP*SALPVGPQEGS
Trigger: GCTCCCCTCCTGTGGCCCGACAGGGAGAGCCGAGCATGGGCGCTGCCCCTTCCTGCTGGGCATTTCTTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS GCA 72 bp TGCTCGGCTCTCCCTGTCGGGCCACAGGAGGGGAGCTaGCAGGACCACCTACATTCGGGGCACACAGCCTCA +
Preference number: 6 (lower is better)
Translates to: CSALPVGPQEGS*QDHLHSGHTAS
Trigger: TGAGGCTGTGTGCCCCGAATGTAGGTGGTCCTGGCAGCTCCCCTCCTGTGGCCCGACAGGGAGAGCCGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS GCA 72 bp CAAGGGCGAGTGGAAAGCGGGGCCGGGTCGGTGGGCTaGGCACGCCCAGGTGCAAAGAGGCAAAGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: QGRVESGAGSVG*ARPGAKRQRSK
Trigger: CTTTGACCTTTGCCTCTTTGCACCTGGGCGTGCGCAGCCCACCGACCCGGCCCCGCTTTCCACTCGCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592863.2
CDS CCA 72 bp GCCACCACCCCGCATCCTGAGCATTCCCAGCTCCCGTaGCCGGTAGATTCTGCTGGAACGACCTCCACGTGC +
Preference number: 6 (lower is better)
Translates to: ATTPHPEHSQLP*PVDSAGTTSTC
Trigger: GCACGTGGAGGTCGTTCCAGCAGAATCTACCGGCCACGGGAGCTGGGAATGCTCAGGATGCGGGGTGGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS CCA 72 bp TGCAGAGGCAGCCGCATGGCCCGCCAGGTGGGACTGTaGGAGGTTCACGTTCCTCTGGGAGGCAGCTTGTTA +
Preference number: 6 (lower is better)
Translates to: CRGSRMARQVGL*EVHVPLGGSLL
Trigger: TAACAAGCTGCCTCCCAGAGGAACGTGAACCTCCCACAGTCCCACCTGGCGGGCCATGCGGCTGCCTCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590709.3
CDS GCA 72 bp GCTCCAGATCTAACCACACATCGCGGTGCCAAGAAATaGCCAGCAGGAAGGGGCAGCGCCCATGCTCGGCTC +
Preference number: 6 (lower is better)
Translates to: APDLTTHRGAKK*PAGRGSAHARL
Trigger: GAGCCGAGCATGGGCGCTGCCCCTTCCTGCTGGGCATTTCTTGGCACCGCGATGTGTGGTTAGATCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS GCA 72 bp ACCTCCACGTGCTCCAGATCTAACCACACATCGCGGTaGCAAGAAATGCCCAGCAGGAAGGGGCAGCGCCCA +
Preference number: 6 (lower is better)
Translates to: TSTCSRSNHTSR*QEMPSRKGQRP
Trigger: TGGGCGCTGCCCCTTCCTGCTGGGCATTTCTTGGCACCGCGATGTGTGGTTAGATCTGGAGCACGTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587057.5
CDS GCA 72 bp CCGTGGCCGGTAGATTCTGCTGGAACGACCTCCACGTaGTCCAGATCTAACCACACATCGCGGTGCCAAGAA +
Preference number: 6 (lower is better)
Translates to: PWPVDSAGTTST*SRSNHTSRCQE
Trigger: TTCTTGGCACCGCGATGTGTGGTTAGATCTGGAGCACGTGGAGGTCGTTCCAGCAGAATCTACCGGCCACGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587057.5