RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLR3H (Homo sapiens)

Ensembl gene IDs: ENSG00000100413

Ensembl transcript IDs: ENST00000337566.9, ENST00000355209.9, ENST00000396504.6, ENST00000407461.5, ENST00000420561.1, ENST00000431534.5, ENST00000432789.1, ENST00000442616.1, ENST00000483837.1

Found 609 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCAGGGCTGAACCCAAGTCCTGGCCCAGCCGGGTGAAAGGACTCTaGCACCCCCTGGTGGCTGGGTGGGGCAGAGGGTGCTCCCAGGAA +
Preference number: 1 (lower is better)
Translates to: TRAEPKSWPSRVKGL*HPLVAGWGRGCSQE
Trigger: TTCCTGGGAGCACCCTCTGCCCCACCCAGCCACCAGGGGGTGCCAGAGTCCTTTCACCCGGCTGGGCCAGGACTTGGGTTCAGCCCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR GCA 90 bp GGGCAGAGGGTGCTCCCAGGAAGGGGGCGCCTTGAGCTTCACAGATaGATCTTGTGTGGGGCCCGGAGGCCGTCCCTGTCTCACCCAACC +
Preference number: 1 (lower is better)
Translates to: GQRVLPGRGRLELHR*ILCGARRPSLSHPT
Trigger: GGTTGGGTGAGACAGGGACGGCCTCCGGGCCCCACACAAGATGCATCTGTGAAGCTCAAGGCGCCCCCTTCCTGGGAGCACCCTCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR GCA 90 bp CACCCGGAAGCGGATCTCCTCGCCGGTGTCCATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTACTCCCACACCCACACCTGCTCCGC +
Preference number: 1 (lower is better)
Translates to: HPEADLLAGVHVEVV*SFLRLVLPHPHLLR
Trigger: GCGGAGCAGGTGTGGGTGTGGGAGTACGAGACGGAGGAAGGAGCACACGACCTCTACATGGACACCGGCGAGGAGATCCGCTTCCGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR CCA 90 bp GCAGCTCCTCACTGGAAGTGGTGGCATCTGCTGAGCTGGGCCCTGTaGGGGACGTGTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGA +
Preference number: 1 (lower is better)
Translates to: AAPHWKWWHLLSWAL*GTCQQSSRPPPGSG
Trigger: TCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR CCA 90 bp GCCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTaGGTCTCATTCACGCAGGCTTCACTTGCCCTTAGGCAGCAGGCG +
Preference number: 1 (lower is better)
Translates to: ATANNHVPLSPRGLV*VSFTQASLALRQQA
Trigger: CGCCTGCTGCCTAAGGGCAAGTGAAGCCTGCGTGAATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR TCA 90 bp CTCATCCCATCCCTAGTGATCAAGGTCACTCTCCCTGCCCGTGGCTaGGTTGGGCCTGGTTCTAGGCTGTGTCCACTGCAGCCCACAGGC +
Preference number: 1 (lower is better)
Translates to: LIPSLVIKVTLPARG*VGPGSRLCPLQPTG
Trigger: GCCTGTGGGCTGCAGTGGACACAGCCTAGAACCAGGCCCAACTCAGCCACGGGCAGGGAGAGTGACCTTGATCACTAGGGATGGGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CCA 90 bp CCTTCTTTGGCAGCTCCTCACTGGAAGTGGTGGCATCTGCTGAGCTaGGCCCTGTGGGGGACGTGTCAACAAAGCTCTCGTCCACCACCC +
Preference number: 1 (lower is better)
Translates to: PSLAAPHWKWWHLLS*ALWGTCQQSSRPPP
Trigger: GGGTGGTGGACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAAAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR TCA 90 bp AGCCTCCTTCTTTGGCAGCTCCTCACTGGAAGTGGTGGCATCTGCTaGGCTGGGCCCTGTGGGGGACGTGTCAACAAAGCTCTCGTCCAC +
Preference number: 1 (lower is better)
Translates to: SLLLWQLLTGSGGIC*AGPCGGRVNKALVH
Trigger: GTGGACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR GCA 90 bp TCACTGTCCAGCTCGAGACACTATCTCCTTAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: SLSSSRHYLLSIGLS*CCLHSRPYHLPAGW
Trigger: CCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CCA 90 bp CTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATaGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATGGTGG +
Preference number: 1 (lower is better)
Translates to: LFSQGQWRPNSHSHR*IHHCSEGGAGPRWW
Trigger: CCACCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CCA 90 bp TTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTaGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGT +
Preference number: 1 (lower is better)
Translates to: LSSPGSRKGLFSQGQ*RPNSHSHRWIHHCS
Trigger: ACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR TCA 90 bp CTGCAGCCTTTGATCTTCCCAATGAGAATCTCATCTAGGAATGGATaGAACACCACGCAGCGAAAATGGACAGACAGGGCCACCGGGTCG +
Preference number: 1 (lower is better)
Translates to: LQPLIFPMRISSRNG*NTTQRKWTDRATGS
Trigger: CGACCCGGTGGCCCTGTCTGTCCATTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGAGATTCTCATTGGGAAGATCAAAGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
3UTR GCA 90 bp CAAGAATCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTaGCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGT +
Preference number: 1 (lower is better)
Translates to: QESKTSDCSVSDWCL*RLLSSPGSRKGLFS
Trigger: ACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGATTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CAA 90 bp AGGGTGCTCCCAGGAAGGGGGCGCCTTGAGCTTCACAGATGCATCTaGTGTGGGGCCCGGAGGCCGTCCCTGTCTCACCCAACCTCCCTC +
Preference number: 2 (lower is better)
Translates to: RVLPGRGRLELHRCI*CGARRPSLSHPTSL
Trigger: GAGGGAGGTTGGGTGAGACAGGGACGGCCTCCGGGCCCCACACAAGATGCATCTGTGAAGCTCAAGGCGCCCCCTTCCTGGGAGCACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCAGGGCCTAGATGGTaGAGGAGCGGGGCAAGCTGG +
Preference number: 2 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQAGPRW*RSGASW
Trigger: CCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGC...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp GGGGCCCTCACACCTCCCCAACCTCCCTTTACTCACCAGGACCTGGCACTCAGGCACCTGGGTCTGACCTaGGCCATCAGGCACAGACTG +
Preference number: 2 (lower is better)
Translates to: GALTPPQPPFTHQDLALRHLGLT*AIRHRL
Trigger: CAGTCTGTGCCTGATGGCCCAGGTCAGACCCAGGTG...CCTGAGTGCCAGGTCCTGGTGAGTAAAGGGAGGTTGGGGAGGTGTGAGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CAA 90 bp CCTAGATGGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCATCGGCC +
Preference number: 2 (lower is better)
Translates to: PRWWRSGASWWALLA*PHCPARDTISLASA
Trigger: GGCCGATGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp CTCGGGGCCTCGTTTGGGTCTCATTCACGCAGGCTTCACTTGCCCTTAGGCAGCCTAGGCTGTGTCCACTaGAGCCCACAGGCCCGTCAG +
Preference number: 2 (lower is better)
Translates to: LGASFGSHSRRLHLPLGSLGCVH*SPQARQ
Trigger: CTGACGGGCCTGTGGGCTGCAGTGGACACAGCCTAG...GCTGCCTAAGGGCAAGTGAAGCCTGCGTGAATGAGACCCAAACGAGGCCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp AGGCCCCCGATGACCGAATGCCGCCTGCTTTCCAGAGACCAACCTGAAGAAACATCCCCGCCCCGCCGCTaGCGTCAAGTTCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RPPMTECRLLSRDQPEETSPPRR*RQVQLH
Trigger: GTGGAGCTGAACTTGACGCCAGCGGCGGGGCGGGGA...TGTTTCTTCAGGTTGGTCTCTGGAAAGCAGGCGGCATTCGGTCATCGGGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp GGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGCTATTGGCAGCTCCTCACTaGAAGTGGTGGCATCTGCTG +
Preference number: 2 (lower is better)
Translates to: GHTTFPQAGRVHCPAPGLLAAPH*KWWHLL
Trigger: CAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAA...TAGCCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCAC +
Preference number: 2 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQEKAQA*LTDGSH
Trigger: GTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTC...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp CCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: PGSRKGLFSQGQWRPNSHAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...GTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp TCCAGGTGGCCCCACAGAGAAAGCAAAGTGGCTTCTCAGAGTTGGGGGTTGGAGGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: SRWPHRESKVASQSWGLEGAGPR*WRSGAS
Trigger: GCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC...CTCCAACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGTGGGGCCACCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp GAGACTAATCAGTCATCAGCCAGGACCCAGGCATGTCCTGGGCTCCTGTGTCCAGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: ETNQSSARTQACPGLLCPGAGPR*WRSGAS
Trigger: GCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC...TGGACACAGGAGCCCAGGACATGCCTGGGTCCTGGCTGATGACTGATTAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp CTGATGGATCCCACAAGCGTGTACGGAGCCTCCTTCTTTGGCAGCTCCTCACTGGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: LMDPTSVYGASFFGSSSLGAGPR*WRSGAS
Trigger: GCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC...CAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGTACACGCTTGTGGGATCCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp GGTCCACCAGGAGAGAAGGCCCAGGCCTGGCTCACTGATGGATCCCACAAGCGTGCTCCTCACTGGAAGTaGTGGCATCTGCTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: GPPGEKAQAWLTDGSHKRAPHWK*WHLLSW
Trigger: CCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGC...ACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTCTCCTGGTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR CAA 90 bp ACACACCTGCCTCTGCCAAGCACCAATGGGTGGCTTCTGTCTTCTTaGCCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCG +
Preference number: 2 (lower is better)
Translates to: THLPLPSTNGWLLSS*PLQTTTCLCPLGAS
Trigger: CGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGGCAAAGAAGACAGAAGCCACCCATTGGTGCTTGGCAGAGGCAGGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR GCA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCACTCCTGGCCTTaGCTCACTGTCCAGCTCGAG +
Preference number: 2 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGAGHSWP*LTVQLE
Trigger: CTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCC...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp GTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATTCCCACACCCACACCTaGTCCGCTTCGTCGAACTTG +
Preference number: 2 (lower is better)
Translates to: VNKALVHHPEADLLAGVHSHTHT*SASSNL
Trigger: CAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGA...ATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGAAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp AGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAAGGCCTCGTCCCCCTGAGGTGGTaGGGTGAGGGGCAGCCACCT +
Preference number: 2 (lower is better)
Translates to: RTCARGFFLIMNVQQEGLVPLRW*GEGQPP
Trigger: AGGTGGCTGCCCCTCACCCCACCACCTCAGGGGGAC...GAGGCCTTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR TCA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCGTAGGGCCAGACAGGTaGGGACGGTGCCCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTVGPDR*GRCPPL
Trigger: CAGAGGAGGGCACCGTCCTCACCTGTCTGGCCCTAC...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR GCA 90 bp GTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCGGGCACTCCTGGCCTTaGCTCACTGTCCAGCTCGAG +
Preference number: 2 (lower is better)
Translates to: VVKSRVQEGSFQSRSVEAGHSWP*LTVQLE
Trigger: CTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCC...GGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp CAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: QVQGPGRVFSVKVSGGPTAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...TGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR TCA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCCTGAGGTGGTGGGGTaGGGGGCAGCCACCTTGTTT +
Preference number: 2 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTPEVVG*GAATLF
Trigger: AAACAAGGTGGCTGCCCCTCACCCCACCACCTCAGG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR GCA 90 bp GGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGG +
Preference number: 2 (lower is better)
Translates to: GQWRPNSHSHRWIHHCSESIGLS*CCLHSR
Trigger: CCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCT...TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp CAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGG +
Preference number: 2 (lower is better)
Translates to: QWRPNSHSHRWIHHCSEGSIGLS*CCLHSR
Trigger: CCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCT...TCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp GGCCACCGGGTCGAATCTTGCCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTTAGTCGGCCAACATaGCCCCCAGGACGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: GHRVESCLPQTGLIPNTGFSRPT*PPGRQG
Trigger: TCCCTGCCGTCCTGGGGGGCATGTTGGCCGACTAAA...GCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442616.1
3UTR-3UTR CCA 90 bp TTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: FSVKVSGGPTATATDGSIAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...GATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp AGGCCCCCGATGACCGAATGCCGCCTGCTTTCCAGAGACCAACCTGAAGAAACATTACTCACCAGGACCTaGCACTCAGGGGACAGCCCA +
Preference number: 2 (lower is better)
Translates to: RPPMTECRLLSRDQPEETLLTRT*HSGDSP
Trigger: TGGGCTGTCCCCTGAGTGCCAGGTCCTGGTGAGTAA...TGTTTCTTCAGGTTGGTCTCTGGAAAGCAGGCGGCATTCGGTCATCGGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCACTCTCCCTGCCCGTaGCTGAGTTGGGCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTHSPCP*LSWAWF
Trigger: GAACCAGGCCCAACTCAGCCACGGGCAGGGAGAGTG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp GTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCCTGAGCTGGGCCCTGTaGGGGACGTGTCAACAAAGC +
Preference number: 2 (lower is better)
Translates to: VFSVKVSGGPTATATDGSLSWAL*GTCQQS
Trigger: GCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAG...GGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp TTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACCCTCACTGGAAGTGGTaGCATCTGCTGAGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: FSQGQWRPNSHSHRWIHHPHWKW*HLLSWA
Trigger: GGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGG...GTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGAGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCAC +
Preference number: 2 (lower is better)
Translates to: RVFSVKVSGGPTATATDGEKAQA*LTDGSH
Trigger: GTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTC...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR TCA 90 bp GAGACTAATCAGTCATCAGCCAGGACCCAGGCATGTCCTGGGCTCCTGTGTCCAAGGGTGAGCGAACATTaGCCTGTCCCAACTTTGGGC +
Preference number: 2 (lower is better)
Translates to: ETNQSSARTQACPGLLCPRVSEH*PVPTLG
Trigger: GCCCAAAGTTGGGACAGGTCAATGTTCGCTCACCCT...TGGACACAGGAGCCCAGGACATGCCTGGGTCCTGGCTGATGACTGATTAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR GCA 90 bp CCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGATGGATCCATCACTaGAGTGAAGGAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: PGSRKGLFSQGQWRPNSHRWIHH*SEGGAG
Trigger: CCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCT...GTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCCCCCGATGACCGAATaGCGCCTGCTTTCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTPPMTE*RLLSRD
Trigger: GTCTCTGGAAAGCAGGCGGCATTCGGTCATCGGGGG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp AGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAAGGCCTCTTTCCCCTCCTGCACTaGCCCCAGGGTAGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: RTCARGFFLIMNVQQEGLFPLLH*PQGSFS
Trigger: GGAGAAGCTACCCTGGGGCCAGTGCAGGAGGGGAAA...GAGGCCTTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp TCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTGGCATCTGCTGAGCTaGGCCCTGTGGGGGACGTGT +
Preference number: 2 (lower is better)
Translates to: SVPFVVKSRVQEGSFQSRWHLLS*ALWGTC
Trigger: ACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCA...CCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp TCTCCTCGCCGGTGTCCATGTAGAGGTCGTGTGCTCCTTCCTCCGTCTCGTACTGACGTGCACTCCTTCTaGGCTGCAGCCTTTGATCTT +
Preference number: 2 (lower is better)
Translates to: SPRRCPCRGRVLLPPSRTDVHSF*AAAFDL
Trigger: AAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTC...AGTACGAGACGGAGGAAGGAGCACACGACCTCTACATGGACACCGGCGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
3UTR-3UTR CCA 90 bp TCTCATCTAGGAATGGATGAAACACCACGCAGCGAAAATGGACAGACAGGGCCAGGACGGCAGGGACCCTaGCATCAGCAGGGCATGAGG +
Preference number: 2 (lower is better)
Translates to: SHLGMDETPRSENGQTGPGRQGP*HQQGMR
Trigger: CCTCATGCCCTGCTGATGCCAGGGTCCCTGCCGTCC...TGGCCCTGTCTGTCCATTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
3UTR-3UTR GCA 90 bp GTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGAGATGGATCCATCACTaGAGTGAAGGAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: VSGGPTATATDGSITAVKRWIHH*SEGGAG
Trigger: CCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCT...CTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp AGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGAGATGGATCCATCACTaGAGTGAAGGAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: RVQEGSFQSRSVEAQQPQRWIHH*SEGGAG
Trigger: CCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCT...CTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCACATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTA +
Preference number: 2 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGAHVEVV*SFLRLV
Trigger: TACGAGACGGAGGAAGGAGCACACGACCTCTACATG...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGTGTTCTGTGAGTGATTaGTGTCTGTGCCGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQCSVSD*CLCRLL
Trigger: CAACAAACGGCACAGACACCAATCACTCACAGAACA...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CAA 90 bp ACACCACGCAGCGAAAATGGACAGACAGGGCCACCGGGTCGAATCTaGCCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTCCACGA +
Preference number: 2 (lower is better)
Translates to: TPRSENGQTGPPGRI*PSSDRFNPKHRLPR
Trigger: TCGTGGAAGCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTGGCCCTGTCTGTCCATTTTCGCTGCGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
3UTR-3UTR GCA 90 bp TTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGG +
Preference number: 2 (lower is better)
Translates to: LVSVPFVVKSRVQEGSFQSIGLS*CCLHSR
Trigger: CCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCT...CTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp AGAGAGACGTGCACTCCTTCTGGGCTGCAGCCTTTGATCTTCCCAATGAGAATCTCCCACACCCACACCTaGTCCGCTTCGTCGAACTTG +
Preference number: 2 (lower is better)
Translates to: RETCTPSGLQPLIFPMRISHTHT*SASSNL
Trigger: CAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGA...GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
3UTR-3UTR CCA 90 bp TCCAGGTGGCCCCACAGAGAAAGCAAAGTGGCTTCTCAGAGTTGGGGGTTGGAGAGCCACAGCCACAGATaGATCCATCACTGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: SRWPHRESKVASQSWGLESHSHR*IHHCSE
Trigger: TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCT...CTCCAACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGTGGGGCCACCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp CAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGAGCCACAGCCACAGATaGATCCATCACTGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: QSRSVEAQQPQPQMDPSLSHSHR*IHHCSE
Trigger: TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCT...CAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp CTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTA +
Preference number: 2 (lower is better)
Translates to: LFSQGQWRPNSHSHRWIHHVEVV*SFLRLV
Trigger: TACGAGACGGAGGAAGGAGCACACGACCTCTACATG...ATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp TCATCGAAGAAGCCTAGAGAGACGTGCACTCCTTCTGGGCTGCAGCCTTTGATCGACGTGCACTCCTTCTaGGCTGCAGCCTTTGATCTT +
Preference number: 2 (lower is better)
Translates to: SSKKPRETCTPSGLQPLIDVHSF*AAAFDL
Trigger: AAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTC...GATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTCTCTAGGCTTCTTCGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432789.1
ENST00000442616.1
3UTR-3UTR GCA 90 bp GGAGTTAGTGAGAGATATCTTAGGATATCTGGCCCTAGACAAAGACAAGGAAGGCTGCAAACAACCACGTaGCTCTGTCCCCTCGGGGCC +
Preference number: 2 (lower is better)
Translates to: GVSERYLRISGPRQRQGRLQTTT*LCPLGA
Trigger: GGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAG...CCTTCCTTGTCTTTGTCTAGGGCCAGATATCCTAAGATATCTCTCACTAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp GTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTAGCCACAGCCACAGATaGATCCATCACTGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: VSDWCLCRLLSSPGSRKGSHSHR*IHHCSE
Trigger: TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCT...ACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CCA 90 bp GGAGTTAGTGAGAGATATCTTAGGATATCTGGCCCTAGACAAAGACAAGGAAGGCTCAGAGTTGGGGGTTaGAGTCAACCCGGGGCCCTC +
Preference number: 2 (lower is better)
Translates to: GVSERYLRISGPRQRQGRLRVGG*SQPGAL
Trigger: GAGGGCCCCGGGTTGACTCCAACCCCCAACTCTGAG...CCTTCCTTGTCTTTGTCTAGGGCCAGATATCCTAAGATATCTCTCACTAACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CCA 90 bp TTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGTTCTGTGAGTGATTaGTGTCTGTGCCGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: FSQGQWRPNSHSHRWIHHCSVSD*CLCRLL
Trigger: CAACAAACGGCACAGACACCAATCACTCACAGAACA...GTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR GCA 90 bp AGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAAGGCCTCAGTGATTGGTGTCTGTaGCGTTTGTTGTCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: RTCARGFFLIMNVQQEGLSDWCL*RLLSSP
Trigger: TGGACTTGACAACAAACGGCACAGACACCAATCACT...GAGGCCTTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CAA 90 bp AAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTaGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAG +
Preference number: 2 (lower is better)
Translates to: KTSDCSVSDWCLCRL*SSPGSRKGLFSQGQ
Trigger: CTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CAA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGT +
Preference number: 2 (lower is better)
Translates to: SKTSDCSVSDWCLCR*LSSPGSRKGLFSQG
Trigger: ACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CCA 72 bp GGAGCAGGGCCTAGATGGTGGAGGAGCGGGGCAAGCTaGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCT +
Preference number: 3 (lower is better)
Translates to: GAGPRWWRSGAS*WALLALPHCPA
Trigger: AGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR GCA 72 bp GTGCTCCCAGGAAGGGGGCGCCTTGAGCTTCACAGATaGATCTTGTGTGGGGCCCGGAGGCCGTCCCTGTCT +
Preference number: 3 (lower is better)
Translates to: VLPGRGRLELHR*ILCGARRPSLS
Trigger: AGACAGGGACGGCCTCCGGGCCCCACACAAGATGCATCTGTGAAGCTCAAGGCGCCCCCTTCCTGGGAGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CCA 72 bp CATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATGGTaGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: HHCSEGGAGPRW*RSGASWWALLA
Trigger: GGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR GCA 72 bp GTGGCTGAGTTGGGCCTGGTTCTAGGCTGTGTCCACTaGAGCCCACAGGCCCGTCAGCCTCTTGCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: VAELGLVLGCVH*SPQARQPLAPS
Trigger: AGAAGGGGCAAGAGGCTGACGGGCCTGTGGGCTGCAGTGGACACAGCCTAGAACCAGGCCCAACTCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CCA 72 bp TCACACCTCCCCAACCTCCCTTTACTCACCAGGACCTaGCACTCAGGGGACAGCCCACCCACTGCAGGACCC +
Preference number: 3 (lower is better)
Translates to: SHLPNLPLLTRT*HSGDSPPTAGP
Trigger: GGGTCCTGCAGTGGGTGGGCTGTCCCCTGAGTGCCAGGTCCTGGTGAGTAAAGGGAGGTTGGGGAGGTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CAA 90 bp CTCGCAGACCTCAGCACCAGCGCACACTTGCTAGGGGCACCCCTAGTGAAAGGGTGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 3 (lower is better)
Translates to: LADLSTSAHLLGAPLVKGWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...CCCTTTCACTAGGGGTGCCCCTAGCAAGTGTGCGCTGGTGCTGAGGTCTGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CAA 90 bp CACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATGTAGAGGTCGTGTGCTCCTCCGCTTCGTCGAACTaGGCTGGCTGCTGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: HHPEADLLAGVHVEVVCSSASSN*AGCCSD
Trigger: GTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGA...GGAGCACACGACCTCTACATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp CCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTGGGTCTCATTGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 3 (lower is better)
Translates to: PLQTTTCLCPLGASFGSHWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...ATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR GCA 72 bp GCTCCTTCCTCCGTCTCGTACTCCCACACCCACACCTaGTCCGCTTCGTCGAACTTGGCTGGCTGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: APSSVSYSHTHT*SASSNLAGCCS
Trigger: ACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGAGTACGAGACGGAGGAAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR GCA 72 bp GCGGATCTCCTCGCCGGTGTCCATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTACTCCCACACCCACAC +
Preference number: 3 (lower is better)
Translates to: ADLLAGVHVEVV*SFLRLVLPHPH
Trigger: GTGTGGGTGTGGGAGTACGAGACGGAGGAAGGAGCACACGACCTCTACATGGACACCGGCGAGGAGATCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR GCA 72 bp CTTCCACGATGCCGTCAACCATTTAGTCGGCCAACATaGCCCCCAGGACGGCAGGGACCCTGGCATCAGCAG +
Preference number: 3 (lower is better)
Translates to: LPRCRQPFSRPT*PPGRQGPWHQQ
Trigger: CTGCTGATGCCAGGGTCCCTGCCGTCCTGGGGGGCATGTTGGCCGACTAAATGGTTGACGGCATCGTGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442616.1
3UTR CCA 72 bp ATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTG +
Preference number: 3 (lower is better)
Translates to: IHHCSEGGAGPR*WRSGASWWALL
Trigger: CAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp GTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATCGGCCTCAGCTGCTGTaGTCTTCACAGCCGGCCATA +
Preference number: 3 (lower is better)
Translates to: VNKALVHHPEADLLAGVHRPQLL*SSQPAI
Trigger: TATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCG...ATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR GCA 72 bp GAAGCACCAGGACCACAGAACACGTGTCTGAAGACTTaGCTGCCTCTCACCCCTCTGTCACCCCTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: EAPGPQNTCLKT*LPLTPLSPLLG
Trigger: GCCCAGGAGGGGTGACAGAGGGGTGAGAGGCAGGCAAGTCTTCAGACACGTGTTCTGTGGTCCTGGTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CCA 72 bp CTAGTTGCTGGTCCACCAGGAGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCACAAGCGTGTACGGAGC +
Preference number: 3 (lower is better)
Translates to: LVAGPPGEKAQA*LTDGSHKRVRS
Trigger: GCTCCGTACACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTCTCCTGGTGGACCAGCAACTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCATGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 3 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGAWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR TCA 72 bp TCCCTAGTGATCAAGGTCACTCTCCCTGCCCGTGGCTaGGTTGGGCCTGGTTCTAGGCTGTGTCCACTGCAG +
Preference number: 3 (lower is better)
Translates to: SLVIKVTLPARG*VGPGSRLCPLQ
Trigger: CTGCAGTGGACACAGCCTAGAACCAGGCCCAACTCAGCCACGGGCAGGGAGAGTGACCTTGATCACTAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR TCA 72 bp GGTCTGTGGCTGATCTTGCAGCTGAGGCCTGAAGGGTaGGCGAACATTGACCTGTCCCAACTTTGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: GLWLILQLRPEG*ANIDLSQLWAA
Trigger: GGCCGCCCAAAGTTGGGACAGGTCAATGTTCGCTCACCCTTCAGGCCTCAGCTGCAAGATCAGCCACAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CCA 72 bp CAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATaGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: QGQWRPNSHSHR*IHHCSEGGAGP
Trigger: AGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CCA 72 bp AACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTaGGTCTCATTCACGCAGGCTTCACTTGCCCTTAGG +
Preference number: 3 (lower is better)
Translates to: NNHVPLSPRGLV*VSFTQASLALR
Trigger: CCTAAGGGCAAGTGAAGCCTGCGTGAATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CAA 90 bp AGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCGGCCTCAGCTGCTGTaGTCTTCACAGCCGGCCATA +
Preference number: 3 (lower is better)
Translates to: RVQEGSFQSRSVEAQQPQRPQLL*SSQPAI
Trigger: TATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCG...CTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp TGGATCCCACAAGCGTGTACGGAGCCTCCTTCTTTGGCAGCTCCTCACTGGAAGCGGCCTCAGCTGCTGTaGTCTTCACAGCCGGCCATA +
Preference number: 3 (lower is better)
Translates to: WIPQACTEPPSLAAPHWKRPQLL*SSQPAI
Trigger: TATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCG...CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGTACACGCTTGTGGGATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp ACGGAGCCTCCTTCTTTGGCAGCTCCTCACTGGAAGTGGTGGCATCTGCTGAGCACGGAGCCTCCTTCTTaGGCAGCTCCTCACTGGAAG +
Preference number: 3 (lower is better)
Translates to: TEPPSLAAPHWKWWHLLSTEPPS*AAPHWK
Trigger: CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGT...GCTCAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp GTGGCATCTGCTGAGCTGGGCCCTGTGGGGGACGTGTCAACAAAGCTCTCGTCCTCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATC +
Preference number: 3 (lower is better)
Translates to: VASAELGPVGDVSTKLSSSGLQP*IFPMRI
Trigger: GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...GGACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432789.1
3UTR TCA 72 bp TTAGGGTGGAAGCACCAGGACCACAGAACACGTGTCTaGAGACTTGCCTGCCTCTCACCCCTCTGTCACCCC +
Preference number: 3 (lower is better)
Translates to: LGWKHQDHRTRV*RLACLSPLCHP
Trigger: GGGGTGACAGAGGGGTGAGAGGCAGGCAAGTCTTCAGACACGTGTTCTGTGGTCCTGGTGCTTCCACCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CAA 90 bp CTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCGGCCTCAGCTGCTGTaGTCTTCACAGCCGGCCATA +
Preference number: 3 (lower is better)
Translates to: LFSQGQWRPNSHSHRWIHRPQLL*SSQPAI
Trigger: TATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCG...ATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCGGCCTCAGCTGCTGTaGTCTTCACAGCCGGCCATA +
Preference number: 3 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTRPQLL*SSQPAI
Trigger: TATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CAA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGTGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 3 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR GCA 72 bp AGCTCGAGACACTATCTCCTTAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGGCCATACCACCTTCCC +
Preference number: 3 (lower is better)
Translates to: SSRHYLLSIGLS*CCLHSRPYHLP
Trigger: GGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCTAAGGAGATAGTGTCTCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR GCA 72 bp AAGCTCTCCAGGCTAGTCAGGCCCCCGATGACCGAATaGCGCCTGCTTTCCAGAGACCAACCTGAAGAAACA +
Preference number: 3 (lower is better)
Translates to: KLSRLVRPPMTE*RLLSRDQPEET
Trigger: TGTTTCTTCAGGTTGGTCTCTGGAAAGCAGGCGGCATTCGGTCATCGGGGGCCTGACTAGCCTGGAGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CCA 72 bp CCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTaGAGGCCCAACAGCCACAGCCACAGATGGATCCAT +
Preference number: 3 (lower is better)
Translates to: PGSRKGLFSQGQ*RPNSHSHRWIH
Trigger: ATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp GGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATTGTCTGTGCCGTTTGTaGTCAAGTCCAGGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: GSFQSRSVEAQQPQPQMDCLCRL*SSPGSR
Trigger: CCTGGACCCTGGACTTGACAACAAACGGCACAGACA...ATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATGTCTGTGCCGTTTGTaGTCAAGTCCAGGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: RVFSVKVSGGPTATATDGCLCRL*SSPGSR
Trigger: CCTGGACCCTGGACTTGACAACAAACGGCACAGACA...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp TTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: FSQGQWRPNSHSHRWIHHWCLCR*LSSPGS
Trigger: GGACCCTGGACTTGACAACAAACGGCACAGACACCA...GTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CCA 72 bp CTTCATTCCAGCTGGAAAGGCCCCCAGTTCTCCAGGTaGCCCCACAGAGAAAGCAAAGTGGCTTCTCAGAGT +
Preference number: 3 (lower is better)
Translates to: LHSSWKGPQFSR*PHRESKVASQS
Trigger: ACTCTGAGAAGCCACTTTGCTTTCTCTGTGGGGCCACCTGGAGAACTGGGGGCCTTTCCAGCTGGAATGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CAA 90 bp AGATCTAGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAATCTCAGAGTTGGGGGTaGGAGTCAACCCGGGGCCCT +
Preference number: 3 (lower is better)
Translates to: RSRTCARGFFLIMNVQQESQSWG*ESTRGP
Trigger: AGGGCCCCGGGTTGACTCCAACCCCCAACTCTGAGA...TTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCTAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR-3UTR CAA 90 bp TCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGACGGAGCCTCCTTCTTaGGCAGCTCCTCACTGGAAG +
Preference number: 3 (lower is better)
Translates to: SVPFVVKSRVQEGSFQSRTEPPS*AAPHWK
Trigger: CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGT...CCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
3UTR-3UTR CAA 90 bp CCACCGGGTCGAATCTTGCCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTTCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATC +
Preference number: 3 (lower is better)
Translates to: PPGRILPSSDRFNPKHRLSGLQP*IFPMRI
Trigger: GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...AAGCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
3UTR-3UTR CAA 90 bp GGAGTTAGTGAGAGATATCTTAGGATATCTGGCCCTAGACAAAGACAAGGAAGGTGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: GVSERYLRISGPRQRQGRWCLCR*LSSPGS
Trigger: GGACCCTGGACTTGACAACAAACGGCACAGACACCA...CCTTCCTTGTCTTTGTCTAGGGCCAGATATCCTAAGATATCTCTCACTAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CCA 72 bp CAAGAATCCAAAACCAGTGACTGTTCTGTGAGTGATTaGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: QESKTSDCSVSD*CLCRLLSSPGS
Trigger: GGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGATTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGGCGGGGCTGCCTGTGTaGTCGCGCACAGCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGAGLPV*SRTAWG
Trigger: GCCCCACGCTGTGCGCGAGCACACAGGCAGCCCCGC...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407461.5
CDS-3UTR GCA 90 bp ACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGAGGCGGGGCGGGGCTaGCTGTGTGCTCGCGCACAG +
Preference number: 4 (lower is better)
Translates to: TAGHTTFPQAGRVHCPAPEAGRG*LCARAQ
Trigger: CTGTGCGCGAGCACACAGGCAGCCCCGCCCCGCCTC...TGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407461.5
CDS-3UTR GCA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCGCACCCGCGCCACGTaGCGCCGCTCGTATCACGCA +
Preference number: 4 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPRTRAT*RRSYHA
Trigger: TGCGTGATACGAGCGGCGGCACGTGGCGCGGGTGCG...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GGAGCAGGGCCTAGATGGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCCACAGCCGCTCGCGCTTaGGCGACTGCGGGCGAGATT +
Preference number: 4 (lower is better)
Translates to: GAGPRWWRSGASWWALLATAARA*ATAGEI
Trigger: AATCTCGCCCGCAGTCGCGCAAGCGCGAGCGGCTGT...GGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396504.6
CDS-3UTR CCA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGGAGPR*WRSGAS
Trigger: GCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGCCCCCAGGCTGGCGGTaGGGTTGCACGGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: QLLLSSQPAIPPSRRLVGPPGWR*GCTGRS
Trigger: AGACCGCCCCGTGCAACCTCACCGCCAGCCTGGGGG...CCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTCCCGTCCCAGTCGCTaGGGCCCCCAGGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHSRPSR*GPQAGG
Trigger: ACCGCCAGCCTGGGGGCCTCAGCGACTGGGACGGGA...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp GGAGCAGGGCCTAGATGGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCCGATGAAGGCCTGGCCTaGGCCCATGTGGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GAGPRWWRSGASWWALLADEGLA*AHVALG
Trigger: CCCTAAGGCCACATGGGCTCAGGCCAGGCCTTCATC...GGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGGGGCACTCCTGGCCTTaGCTCACTGTCCAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGGHSWP*LTVQLE
Trigger: CTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCC...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GGAGCAGGGCCTAGATGGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCCGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GAGPRWWRSGASWWALLAAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...GGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp ACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGTCCCCCTGAGGTGGTaGGGTGAGGGGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: TAGHTTFPQAGRVHCPAPVPLRW*GEGQPP
Trigger: AGGTGGCTGCCCCTCACCCCACCACCTCAGGGGGAC...TGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CCTCCGTCTCGTACTCCCACACCCACACCTGCTCCGCTTCGTCGAACTTGGCTGCCCACGGCCAGGGCTTaGCATGACCGAGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PPSRTPTPTPAPLRRTWLPTARA*HDRGRA
Trigger: GGCCCGGCCTCGGTCATGCCAAGCCCTGGCCGTGGG...CAGCCAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGAGTACGAGACGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR TCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCCCCCAGGCTGGCGGTaGGGTTGCACGGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVPPGWR*GCTGRS
Trigger: AGACCGCCCCGTGCAACCTCACCGCCAGCCTGGGGG...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CCACAAGCGTGTACGGAGCCTCCTTCTTTGGCAGCTCCTCACTGGAAGTGGTGGGGCCAGGGCTTGGCATaGCCGAGGCCGGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PQACTEPPSLAAPHWKWWGQGLA*PRPGLR
Trigger: CCGCAGGCCCGGCCTCGGTCATGCCAAGCCCTGGCC...CCACCACTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGTACACGCTTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR GCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACCGCACCCGCGCCACGTaGCGCCGCTCGTATCACGCA +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHRTRAT*RRSYHA
Trigger: TGCGTGATACGAGCGGCGGCACGTGGCGCGGGTGCG...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCGGGAGCCTCAGGATaGCCAGGCGCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSQPAIPPSRRLVGSTVQPGASG*PGARWV
Trigger: CACCCACCTGGCGCCTGGGCATCCTGAGGCTCCCGG...CTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TGTGGGGGACGTGTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCTCCCACGCCAAGGCCTaGCCGCGAGCCGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CGGRVNKALVHHPEADLLSHAKA*PRAVGP
Trigger: TGGGCCCACGGCTCGCGGGCAGGCCTTGGCGTGGGA...GAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGACACGTCCCCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR CCA 90 bp TTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCATCCCGGCCTGCGCTaGGGGCTCTGGGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: FTAGHTTFPQAGRVHCPAHPGLR*GLWEQE
Trigger: CTCCTGTTCCCAGAGCCCCCAGCGCAGGCCGGGATG...GGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GGAGCAGGGCCTAGATGGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCCCCCAGGGCTAGTTGCTaGTCCACCAGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GAGPRWWRSGASWWALLAPRASC*STRREG
Trigger: GCCTTCTCTCCTGGTGGACCAGCAACTAGCCCTGGG...GGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGCCCAGGGCTAGTTGCTaGTCCACCAGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGPRASC*STRREG
Trigger: GCCTTCTCTCCTGGTGGACCAGCAACTAGCCCTGGG...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp ACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGTGGCTGAGAAGGCATaGGGCCCAGGTCCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TAGHTTFPQAGRVHCPAPVAEKA*GPGPVV
Trigger: TACCACCGGACCTGGGCCTCATGCCTTCTCAGCCAC...TGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCCGGGAGCCTCAGGATaGCCAGGCGCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVPGASG*PGARWV
Trigger: CACCCACCTGGCGCCTGGGCATCCTGAGGCTCCCGG...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CAGAAAATGAAGCTCTCCAGGCTAGTCAGGCCCCCGATGACCGAATGCCGCCTGGGCCCCGGGGCCTGCTaGCTGCCTCTGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QKMKLSRLVRPPMTECRLGPGAC*LPLEGL
Trigger: CAAGCCCTCCAGAGGCAGGCAGCAGGCCCCGGGGCC...CAGGCGGCATTCGGTCATCGGGGGCCTGACTAGCCTGGAGAGCTTCATTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCTGGCATCTGCTGAGCTaGGCCCTGTGGGGGACGTGT +
Preference number: 4 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPWHLLS*ALWGTC
Trigger: ACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCA...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGCTATGGCATCTGCTGAGCTaGGCCCTGTGGGGGACGTGT +
Preference number: 4 (lower is better)
Translates to: GHTTFPQAGRVHCPAPGLWHLLS*ALWGTC
Trigger: ACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCA...TAGCCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: QPAIPPSRRLVGSTVQPQEKAQA*LTDGSH
Trigger: GTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTC...CTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGCCCAGGGCTAGTTGCTaGTCCACCAGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QPAIPPSRRLVGSTVQPQPRASC*STRREG
Trigger: GCCTTCTCTCCTGGTGGACCAGCAACTAGCCCTGGG...CTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGCTCGCGCACAGCGTaGGGCAGAGAGAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHCSRTA*GRERAR
Trigger: CCTCGCCCTCTCTCTGCCCCACGCTGTGCGCGAGCA...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407461.5
CDS-3UTR CCA 90 bp TCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGCATCCCGGCCTGCGCTaGGGGCTCACGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: SAAVVFTAGHTTFPQAGRHPGLR*GLTHHA
Trigger: TGCGTGGTGCGTGAGCCCCCAGCGCAGGCCGGGATG...CCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396504.6
CDS-3UTR CCA 90 bp TGGGGGACGTGTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCGCCCTGCCCGCGAGCCGTaGGCCCAGTACCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: WGTCQQSSRPPPGSGSPRPAREP*AQYLVG
Trigger: GCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGG...GCGAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGACACGTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432789.1
3UTR CAA 72 bp CCAGGAAGGGGGCGCCTTGAGCTTCACAGATGCATCTaGTGTGGGGCCCGGAGGCCGTCCCTGTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: PGRGRLELHRCI*CGARRPSLSHP
Trigger: TGGGTGAGACAGGGACGGCCTCCGGGCCCCACACAAGATGCATCTGTGAAGCTCAAGGCGCCCCCTTCCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGCTACCAGGCCTGGCTCACTaGTGGATCCCACAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GHTTFPQAGRVHCPAPGLPGLAH*WIPQAC
Trigger: ACACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGG...TAGCCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CTCGCAGACCTCAGCACCAGCGCACACTTGCTAGGGGCACCCCTAGTGAAAGGGCTCCCTGCCCGTGGCTaGGTTGGGCCTGGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LADLSTSAHLLGAPLVKGLPARG*VGPGSR
Trigger: CCTAGAACCAGGCCCAACTCAGCCACGGGCAGGGAG...CCCTTTCACTAGGGGTGCCCCTAGCAAGTGTGCGCTGGTGCTGAGGTCTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACCACGGGGCCTCACAGTaGGCAGGCAGAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHHGASQ*AGREGL
Trigger: CAGACCCTCTCTGCCTGCTCACTGTGAGGCCCCGTG...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGTCCCACACCCACACCTaGTCCGCTTCGTCGAACTTG +
Preference number: 4 (lower is better)
Translates to: QPAIPPSRRLVGSTVQPQSHTHT*SASSNL
Trigger: CAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGA...CTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGAGCCCCAGGGCTAGTTaGTGGTCCACCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QPAIPPSRRLVGSTVQPQSPRAS*WSTRRE
Trigger: TTCTCTCCTGGTGGACCAGCAACTAGCCCTGGGGCT...CTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCGGGCACTCCTGGCCTTaGCTCACTGTCCAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: FTAGHTTFPQAGRVHCPAGHSWP*LTVQLE
Trigger: CTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCC...GGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGACGTGTCTGAAGACTTaGCTGCCTCTCACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGTCLKT*LPLTPL
Trigger: CAGAGGGGTGAGAGGCAGGCAAGTCTTCAGACACGT...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TCCAGCCCCAGGGCTAGTTGCTGGTCCACCAGGAGAGAAGGCCCAGGCCTGGCTCTGAGCTGGGCCCTGTaGGGGACGTGTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: SSPRASCWSTRREGPGLALSWAL*GTCQQS
Trigger: GCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAG...AGCCAGGCCTGGGCCTTCTCTCCTGGTGGACCAGCAACTAGCCCTGGGGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGGCAGGGCCTAGATGGTaGAGGAGCGGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSQPAIPPSRRLVGSTVQAGPRW*RSGASW
Trigger: CCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGC...CTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SSQPAIPPSRRLVGSTVQGAGPR*WRSGAS
Trigger: GCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC...CTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCGTCCCCCTGAGGTGGTaGGGTGAGGGGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVVPLRW*GEGQPP
Trigger: AGGTGGCTGCCCCTCACCCCACCACCTCAGGGGGAC...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTGGGTCTCATGAGGCCCAGGTCCGGTaGTACAGCCGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PLQTTTCLCPLGASFGSHEAQVR*YSRVPA
Trigger: TGCAGGGACCCGGCTGTACCACCGGACCTGGGCCTC...ATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CAA 72 bp GGAGCAGACCAGGGCCCCATAGTCACTGCCCGGGCATaGTCCCAGGCAGCAGGATTAGGGGCATCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GADQGPIVTARA*SQAAGLGASPR
Trigger: TCTGGGAGATGCCCCTAATCCTGCTGCCTGGGACAATGCCCGGGCAGTGACTATGGGGCCCTGGTCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp CCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTGGGTCTCATGGTGCCACCTGGGTCTaGCCTGGGCCATCAGGCACA +
Preference number: 4 (lower is better)
Translates to: PLQTTTCLCPLGASFGSHGATWV*PGPSGT
Trigger: TGTGCCTGATGGCCCAGGTCAGACCCAGGTGGCACC...ATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGCCTGAGGTGGTGGGGTaGGGGGCAGCCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQPEVVG*GAATLF
Trigger: AAACAAGGTGGCTGCCCCTCACCCCACCACCTCAGG...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCGTAGGGCCAGACAGGTaGGGACGGTGCCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVVGPDR*GRCPPL
Trigger: CAGAGGAGGGCACCGTCCTCACCTGTCTGGCCCTAC...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp AAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGCAGGCGCCAGGTGGGTaGGGCCAGGCAGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: KGLFSQGQWRPNSHSHRWQAPGG*GQAGRA
Trigger: GGCCCTACCTGCCTGGCCTCACCCACCTGGCGCCTG...CCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp CCTCACACCTCCCCAACCTCCCTTTACTCACCAGGACCTGGCACTCAGGGGACACACGGGGCCTCACAGTaGGCAGGCAGAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PHTSPTSLYSPGPGTQGTHGASQ*AGREGL
Trigger: CAGACCCTCTCTGCCTGCTCACTGTGAGGCCCCGTG...TGTCCCCTGAGTGCCAGGTCCTGGTGAGTAAAGGGAGGTTGGGGAGGTGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp AGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCGCACCCGCGCCACGTaGCGCCGCTCGTATCACGCA +
Preference number: 4 (lower is better)
Translates to: SPGSRKGLFSQGQWRPNSRTRAT*RRSYHA
Trigger: TGCGTGATACGAGCGGCGGCACGTGGCGCGGGTGCG...GCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp AAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGGGCCCCGGGGCCTGCTaGCTGCCTCTGGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KGLFSQGQWRPNSHSHRWGPGAC*LPLEGL
Trigger: CAAGCCCTCCAGAGGCAGGCAGCAGGCCCCGGGGCC...CCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCATGGCATCTGCTGAGCTaGGCCCTGTGGGGGACGTGT +
Preference number: 4 (lower is better)
Translates to: VFTAGHTTFPQAGRVHCPWHLLS*ALWGTC
Trigger: ACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCA...TGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp ACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGCTCCTCACTGGAAGTaGTGGCATCTGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TAGHTTFPQAGRVHCPAPAPHWK*WHLLSW
Trigger: CCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGC...TGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CCTTCTTTGGCAGCTCCTCACTGGAAGTGGTGGCATCTGCTGAGCTGGGCCCTGGCAGGGCCTAGATGGTaGAGGAGCGGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLAAPHWKWWHLLSWALAGPRW*RSGASW
Trigger: CCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGC...CAGGGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAAAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCCTCCGTCTCGTACTCCCACACCCACACCTGCTCCGCTTCGTCGAACTTGGCTGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SSVSYSHTHTCSASSNLAGAGPR*WRSGAS
Trigger: GCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC...AGCCAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGAGTACGAGACGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CAAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTGACTCTGGCACCCCCTaGTGGCTGGGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QAGGHSWPCLTVQLETLSDSGTP*WLGGAE
Trigger: CTCTGCCCCACCCAGCCACCAGGGGGTGCCAGAGTC...AGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGCCTGCTGCCTGCCTCTaGAGGGCTTGTCATCCACCC +
Preference number: 4 (lower is better)
Translates to: QLLLSSQPAIPPSRRLVGPAACL*RACHPP
Trigger: GGGTGGATGACAAGCCCTCCAGAGGCAGGCAGCAGG...CCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp ACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCACGGCAATGGAGTCGTTaGGCTTCCTCTCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: TAGHTTFPQAGRVHCPAPRQWSR*ASSQTA
Trigger: GGCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCG...TGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGCCAGGCCTGGCTCACTaGTGGATCCCACAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QLLLSSQPAIPPSRRLVGPGLAH*WIPQAC
Trigger: ACACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGG...CCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGTGCCAGGATCCACGGTaGGCTGGAGTCTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQCQDPR*AGVCTQ
Trigger: CTGGGTACAGACTCCAGCTCACCGTGGATCCTGGCA...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCCAGGCGCCAGGTGGGTaGGGCCAGGCAGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: FSVKVSGGPTATATDGSIQAPGG*GQAGRA
Trigger: GGCCCTACCTGCCTGGCCTCACCCACCTGGCGCCTG...GATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCCGCACCCGCGCCACGTaGCGCCGCTCGTATCACGCA +
Preference number: 4 (lower is better)
Translates to: VFSVKVSGGPTATATDGSRTRAT*RRSYHA
Trigger: TGCGTGATACGAGCGGCGGCACGTGGCGCGGGTGCG...GGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCTCCCACACCCACACCTaGTCCGCTTCGTCGAACTTG +
Preference number: 4 (lower is better)
Translates to: FTAGHTTFPQAGRVHCPASHTHT*SASSNL
Trigger: CAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGA...GGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGCATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: QPAIPPSRRLVGSTVQPQHVEVV*SFLRLV
Trigger: TACGAGACGGAGGAAGGAGCACACGACCTCTACATG...CTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTGGGTCTCATCTGCAAACAACCACGTaGCTCTGTCCCCTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PLQTTTCLCPLGASFGSHLQTTT*LCPLGA
Trigger: GGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAG...ATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CTCGGGGCCTCGTTTGGGTCTCATTCACGCAGGCTTCACTTGCCCTTAGGCAGCACTCCTGAAGGGGCCTaGAAGGCAGGTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGASFGSHSRRLHLPLGSTPEGA*KAGAGR
Trigger: CCTCCCTGCACCTGCCTTGCAGGCCCCTTCAGGAGT...GCTGCCTAAGGGCAAGTGAAGCCTGCGTGAATGAGACCCAAACGAGGCCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATCTGCGCTGGGGGCTCTaGGAACAGGAGGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: VNKALVHHPEADLLAGVHLRWGL*EQEGQS
Trigger: TGACTGACCCTCCTGTTCCCAGAGCCCCCAGCGCAG...ATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCGCTTCGTCGAACTTaGCTGGCTGCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: FTAGHTTFPQAGRVHCPAPLRRT*LAAAVT
Trigger: AGTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGG...GGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AGCTGGGCCCTGTGGGGGACGTGTCAACAAAGCTCTCGTCCACCACCCGGAAGCCCGCTTCGTCGAACTTaGCTGGCTGCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: SWALWGTCQQSSRPPPGSPLRRT*LAAAVT
Trigger: AGTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGG...GCTTCCGGGTGGTGGACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCTGAGCTGGGCCCTGTaGGGGACGTGTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: AAVVFTAGHTTFPQAGRVLSWAL*GTCQQS
Trigger: GCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAG...GACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCCTGAGCTGGGCCCTGTaGGGGACGTGTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: LLLSSQPAIPPSRRLVGSLSWAL*GTCQQS
Trigger: GCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAG...GGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACCCTCACTGGAAGTGGTaGCATCTGCTGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHPHWKW*HLLSWA
Trigger: GGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGG...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTCCACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATGTAGAGGTCGTGTGCGCTCCTCACTGGAAGTaGTGGCATCTGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VHHPEADLLAGVHVEVVCAPHWK*WHLLSW
Trigger: CCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGC...GCACACGACCTCTACATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCTTGGCAGCTCCTCACTaGAAGTGGTGGCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPLAAPH*KWWHLL
Trigger: CAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAA...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHEKAQA*LTDGSH
Trigger: GTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTC...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CCTCCGTCTCGTACTCCCACACCCACACCTGCTCCGCTTCGTCGAACTTGGCTGGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: PPSRTPTPTPAPLRRTWLEKAQA*LTDGSH
Trigger: GTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTC...CAGCCAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGAGTACGAGACGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTGGCATCTGCTGAGCTGGGCCCTGTGGGGGACGTGTCAACAAAGCTCTCGTCCGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: VASAELGPVGDVSTKLSSEKAQA*LTDGSH
Trigger: GTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTC...GGACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTGGGTCTCATGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PLQTTTCLCPLGASFGSHAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...ATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCGCAGGGCCTAGATGGTaGAGGAGCGGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLAGPRW*RSGASW
Trigger: CCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGC...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CAGAAAATGAAGCTCTCCAGGCTAGTCAGGCCCCCGATGACCGAATGCCGCCTGGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: QKMKLSRLVRPPMTECRLGAGPR*WRSGAS
Trigger: GCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC...CAGGCGGCATTCGGTCATCGGGGGCCTGACTAGCCTGGAGAGCTTCATTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GGAGCAGGGCCTAGATGGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCCAGCGAAAATGGACTTTaGTGTGTGATGCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: GAGPRWWRSGASWWALLASENGL*CVMRHP
Trigger: GGGATGGCGCATCACACACCAAAGTCCATTTTCGCT...GGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCCCCAGTTCTCCAGGTaGCCCCACAGAGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPPQFSR*PHRESK
Trigger: TTTGCTTTCTCTGTGGGGCCACCTGGAGAACTGGGG...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACCCTCGGGGCCTCGTTTaGGTCTCATTCACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHPRGLV*VSFTQA
Trigger: AGCCTGCGTGAATGAGACCCAAACGAGGCCCCGAGG...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCGCACCCCCTGGTGGCTaGGTGGGGCAGAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VVKSRVQEGSFQSRSVEAAPPGG*VGQRVL
Trigger: GAGCACCCTCTGCCCCACCCAGCCACCAGGGGGTGC...GGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCGGGTGAAAGGACTCTaGCACCCCCTGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLRVKGL*HPLVAG
Trigger: CCCAGCCACCAGGGGGTGCCAGAGTCCTTTCACCCG...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CAA 72 bp CAGGAAGGCCTCGCAGACCTCAGCACCAGCGCACACTaGCTAGGGGCACCCCTAGTGAAAGGGAGCAGACCA +
Preference number: 4 (lower is better)
Translates to: QEGLADLSTSAH*LGAPLVKGSRP
Trigger: TGGTCTGCTCCCTTTCACTAGGGGTGCCCCTAGCAAGTGTGCGCTGGTGCTGAGGTCTGCGAGGCCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCTCCCGTCCCAGTCGCTaGGGCCCCCAGGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: DCSVSDWCLCRLLSSPGSSRPSR*GPQAGG
Trigger: ACCGCCAGCCTGGGGGCCTCAGCGACTGGGACGGGA...GGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCCAGGCCTGGCTCACTaGTGGATCCCACAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVPGLAH*WIPQAC
Trigger: ACACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGG...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp TGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGGTGCCACCTGGGTCTaGCCTGGGCCATCAGGCACA +
Preference number: 4 (lower is better)
Translates to: WWALLALPHCPARDTISLGATWV*PGPSGT
Trigger: TGTGCCTGATGGCCCAGGTCAGACCCAGGTGGCACC...TAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGCCAGTGGTCACTCCTaGAGGGGCCTGCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGAASGHS*RGLQGR
Trigger: CCTGCCTTGCAGGCCCCTTCAGGAGTGACCACTGGC...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TCCAGCCCCAGGGCTAGTTGCTGGTCCACCAGGAGAGAAGGCCCAGGCCTGGCTCATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: SSPRASCWSTRREGPGLAHVEVV*SFLRLV
Trigger: TACGAGACGGAGGAAGGAGCACACGACCTCTACATG...AGCCAGGCCTGGGCCTTCTCTCCTGGTGGACCAGCAACTAGCCCTGGGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCAGCCCCAGGGCTAGTTaGTGGTCCACCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: AAVVFTAGHTTFPQAGRVSPRAS*WSTRRE
Trigger: TTCTCTCCTGGTGGACCAGCAACTAGCCCTGGGGCT...GACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATGGACAGCCCACCCACTaGAGGACCCTCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSFQSRSVEAQQPQPQMDGQPTH*RTLWAP
Trigger: TGGGGCCCAGAGGGTCCTGCAGTGGGTGGGCTGTCC...ATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTGGGTCTCATCCTTGTTTCCCCTCCTaGACTGGCCCCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: PLQTTTCLCPLGASFGSHPCFPS*TGPRVA
Trigger: AGCTACCCTGGGGCCAGTGCAGGAGGGGAAACAAGG...ATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCACTTTGGGCGGCCTCTaGCCCATAAGGGAGACTGAG +
Preference number: 4 (lower is better)
Translates to: AAVVFTAGHTTFPQAGRVTLGGL*PIRETE
Trigger: CTCAGTCTCCCTTATGGGGCAGAGGCCGCCCAAAGT...GACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCCTGAGCTGGGCCCTGTaGGGGACGTGTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: SWWALLALPHCPARDTISLSWAL*GTCQQS
Trigger: GCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAG...GGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCTGGCATCTGCTGAGCTaGGCCCTGTGGGGGACGTGT +
Preference number: 4 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLWHLLS*ALWGTC
Trigger: ACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCA...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCTCACTGGAAGTGGTaGCATCTGCTGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCPHWKW*HLLSWA
Trigger: GGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGG...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCGCTCCTCACTGGAAGTaGTGGCATCTGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLSSQPAIPPSRRLVGSAPHWK*WHLLSW
Trigger: CCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGC...GGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: SWWALLALPHCPARDTISEKAQA*LTDGSH
Trigger: GTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTC...GGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGAGAAGGCCCAGGCCTaGCTCACTGATGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: SAAVVFTAGHTTFPQAGREKAQA*LTDGSH
Trigger: GTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTC...CCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TTGCTGGTCCACCAGGAGAGAAGGCCCAGGCCTGGCTCACTGATGGATCCCACACCCAGGGCTAGTTGCTaGTCCACCAGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLVHQERRPRPGSLMDPTPRASC*STRREG
Trigger: GCCTTCTCTCCTGGTGGACCAGCAACTAGCCCTGGG...TGTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTCTCCTGGTGGACCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGTTTCCCCTCCTGCACTaGCCCCAGGGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAAVVFTAGHTTFPQAGRFPLLH*PQGSFS
Trigger: GGAGAAGCTACCCTGGGGCCAGTGCAGGAGGGGAAA...CCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp CTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCCGGCAATGGAGTCGTTaGGCTTCCTCTCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: LLLSSQPAIPPSRRLVGSRQWSR*ASSQTA
Trigger: GGCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCG...GGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGAGAGACTTTGGTGTGTaGTGCGCCATCCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QLLLSSQPAIPPSRRLVGRDFGV*CAIPRE
Trigger: TTCCCTGGGGATGGCGCATCACACACCAAAGTCTCT...CCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337566.9
CDS-3UTR TCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGATGGACTTTGGTGTGTaGTGCGCCATCCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQMDFGV*CAIPRE
Trigger: TTCCCTGGGGATGGCGCATCACACACCAAAGTCCAT...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp GTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCGTAGGGCCAGACAGGTaGGGACGGTGCCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VFSVKVSGGPTATATDGSVGPDR*GRCPPL
Trigger: CAGAGGAGGGCACCGTCCTCACCTGTCTGGCCCTAC...GGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGTGGCTGAGAAGGCATaGGGCCCAGGTCCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: GQWRPNSHSHRWIHHCSEVAEKA*GPGPVV
Trigger: TACCACCGGACCTGGGCCTCATGCCTTCTCAGCCAC...TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp CCTCACACCTCCCCAACCTCCCTTTACTCACCAGGACCTGGCACTCAGGGGACACTGAGGCCTGAAGGGTaGGCGAACATTGACCTGTCC +
Preference number: 4 (lower is better)
Translates to: PHTSPTSLYSPGPGTQGTLRPEG*ANIDLS
Trigger: GGACAGGTCAATGTTCGCTCACCCTTCAGGCCTCAG...TGTCCCCTGAGTGCCAGGTCCTGGTGAGTAAAGGGAGGTTGGGGAGGTGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCTCCCACACCCACACCTaGTCCGCTTCGTCGAACTTG +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVSHTHT*SASSNL
Trigger: CAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGA...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TGGTGGCATCTGCTGAGCTGGGCCCTGTGGGGGACGTGTCAACAAAGCTCTCGTTCCCACACCCACACCTaGTCCGCTTCGTCGAACTTG +
Preference number: 4 (lower is better)
Translates to: WWHLLSWALWGTCQQSSRSHTHT*SASSNL
Trigger: CAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGA...ACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATGAGCCCCAGGGCTAGTTaGTGGTCCACCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: STKLSSTTRKRISSPVSMSPRAS*WSTRRE
Trigger: TTCTCTCCTGGTGGACCAGCAACTAGCCCTGGGGCT...CATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCACTAGGCTGTGTCCACTaGAGCCCACAGGCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: WALLALPHCPARDTISLALGCVH*SPQARQ
Trigger: CTGACGGGCCTGTGGGCTGCAGTGGACACAGCCTAG...TGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCCTTGAGCTTCACAGATaGATCTTGTGTGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LLLSSQPAIPPSRRLVGSLELHR*ILCGAR
Trigger: CCGGGCCCCACACAAGATGCATCTGTGAAGCTCAAG...GGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTACGAACATCCCGGCCTaGGCTGGGGGCTCAATAAGA +
Preference number: 4 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCTNIPA*AGGSIR
Trigger: TCTTATTGAGCCCCCAGCGCAGGCCGGGATGTTCGT...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407461.5
CDS-3UTR GCA 90 bp CAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCTGAGACATTAAGCTaGTTGCCCACGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QLLLSSQPAIPPSRRLVGSETLS*LPTARA
Trigger: AGCCCTGGCCGTGGGCAAGCAGCTTAATGTCTCAGA...CCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR GCA 90 bp ACACCACGCAGCGAAAATGGACAGACAGGGCCACCGGGTCGAATCTTGCCTTCCTTTAGTCGGCCAACATaGCCCCCAGGACGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPRSENGQTGPPGRILPSFSRPT*PPGRQG
Trigger: TCCCTGCCGTCCTGGGGGGCATGTTGGCCGACTAAA...GGAAGGCAAGATTCGACCCGGTGGCCCTGTCTGTCCATTTTCGCTGCGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CCA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCACTGCGCTGGGGGCTCTaGGAACAGGAGGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGALRWGL*EQEGQS
Trigger: TGACTGACCCTCCTGTTCCCAGAGCCCCCAGCGCAG...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCACTGCGCTGGGGGCTCTaGGAACAGGAGGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: WALLALPHCPARDTISLALRWGL*EQEGQS
Trigger: TGACTGACCCTCCTGTTCCCAGAGCCCCCAGCGCAG...TGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CTTAGCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCCCTCACTGGAAGTGGTaGCATCTGCTGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSIGLSCCCLHSRPYHLPPHWKW*HLLSWA
Trigger: GGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGG...GGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACCCCAGGGCTAGTTGCTaGTCCACCAGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PGSRKGLFSQGQWRPNSHPRASC*STRREG
Trigger: GCCTTCTCTCCTGGTGGACCAGCAACTAGCCCTGGG...GTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WWALLALPHCPARDTISLAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...TAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGAGCAGGGCCTAGATGGTaGAGGAGCGGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RVFSVKVSGGPTATATDGAGPRW*RSGASW
Trigger: CCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGC...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAAGGAGCAGGGCCTAGATaGTGGAGGAGCGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: VKSRVQEGSFQSRSVEAQGAGPR*WRSGAS
Trigger: GCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC...TTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CCTCCTCTGCCTTATAACCTTACCCCCGCTTGCCTGACAGAAACATGGCATCAGTCCCCGCCCCGCCGCTaGCGTCAAGTTCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PPLPYNLTPACLTETWHQSPPRR*RQVQLH
Trigger: GTGGAGCTGAACTTGACGCCAGCGGCGGGGCGGGGA...CTGATGCCATGTTTCTGTCAGGCAAGCGGGGGTAAGGTTATAAGGCAGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAACTCAGAGTTGGGGGTTaGAGTCAACCCGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GQWRPNSHSHRWIHHCSELRVGG*SQPGAL
Trigger: GAGGGCCCCGGGTTGACTCCAACCCCCAACTCTGAG...TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCGGATCCACGGTGAGCTaGAGTCTGTACCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVGSTVS*SLYPGH
Trigger: ATGGCCTGGGTACAGACTCCAGCTCACCGTGGATCC...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACCGGGTGAAAGGACTCTaGCACCCCCTGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FSQGQWRPNSHSHRWIHHRVKGL*HPLVAG
Trigger: CCCAGCCACCAGGGGGTGCCAGAGTCCTTTCACCCG...GTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CAGAAAATGAAGCTCTCCAGGCTAGTCAGGCCCCCGATGACCGAATGCCGCCTGGCTGAACCCAAGTCCTaGCCCAGCCGGGTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QKMKLSRLVRPPMTECRLAEPKS*PSRVKG
Trigger: TCCTTTCACCCGGCTGGGCCAGGACTTGGGTTCAGC...CAGGCGGCATTCGGTCATCGGGGGCCTGACTAGCCTGGAGAGCTTCATTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCGCTGAACCCAAGTCCTaGCCCAGCCGGGTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLAEPKS*PSRVKG
Trigger: TCCTTTCACCCGGCTGGGCCAGGACTTGGGTTCAGC...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCATCCCGGCCTGCGCTaGGGGCTCAATAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCHPGLR*GLNKKP
Trigger: AGGTTTCTTATTGAGCCCCCAGCGCAGGCCGGGATG...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407461.5
CDS-3UTR CCA 90 bp CCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTCCACGATGCCGTCAACCACATCCCGGCCTGCGCTaGGGGCTCACGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: PSSDRFNPKHRLPRCRQPHPGLR*GLTHHA
Trigger: TGCGTGGTGCGTGAGCCCCCAGCGCAGGCCGGGATG...TGGTTGACGGCATCGTGGAAGCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR TCA 90 bp AGATCTAGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAACCCCCAGGCTGGCGGTaGGGTTGCACGGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: RSRTCARGFFLIMNVQQEPPGWR*GCTGRS
Trigger: AGACCGCCCCGTGCAACCTCACCGCCAGCCTGGGGG...TTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCTAGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355209.9
CDS-3UTR TCA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGCATCCTCCAGTTTGGTaGTATCAAACAGACAAATGC +
Preference number: 4 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGHPPVW*YQTDKC
Trigger: GCATTTGTCTGTTTGATATCACCAAACTGGAGGATG...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp GGAGCAGGGCCTAGATGGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCCCATCCTCCAGTTTGGTaGTATCAAACAGACAAATGC +
Preference number: 4 (lower is better)
Translates to: GAGPRWWRSGASWWALLAHPPVW*YQTDKC
Trigger: GCATTTGTCTGTTTGATATCACCAAACTGGAGGATG...GGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTATGGACTTTGGTGTGTaGTGCGCCATCCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCMDFGV*CAIPRE
Trigger: TTCCCTGGGGATGGCGCATCACACACCAAAGTCCAT...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp TTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCGCCAGTGGTCACTCCTaGAGGGGCCTGCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSVKVSGGPTATATDGSIASGHS*RGLQGR
Trigger: CCTGCCTTGCAGGCCCCTTCAGGAGTGACCACTGGC...GATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCGATGAAGGCCTGGCCTaGGCCCATGTGGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: VFSVKVSGGPTATATDGSDEGLA*AHVALG
Trigger: CCCTAAGGCCACATGGGCTCAGGCCAGGCCTTCATC...GGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp AGCCTCTTGCCCCTTCTTAGGCTCACACAGTGCACATCCGACGCTCAGCTTCCCCTGAGGCCTGAAGGGTaGGCGAACATTGACCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLLPLLRLTQCTSDAQLPLRPEG*ANIDLS
Trigger: GGACAGGTCAATGTTCGCTCACCCTTCAGGCCTCAG...GGGAAGCTGAGCGTCGGATGTGCACTGTGTGAGCCTAAGAAGGGGCAAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGCATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQHVEVV*SFLRLV
Trigger: TACGAGACGGAGGAAGGAGCACACGACCTCTACATG...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACCATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHHVEVV*SFLRLV
Trigger: TACGAGACGGAGGAAGGAGCACACGACCTCTACATG...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCAGCCCCAGGGCTAGTTaGTGGTCCACCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLSPRAS*WSTRRE
Trigger: TTCTCTCCTGGTGGACCAGCAACTAGCCCTGGGGCT...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGAGATGGATCCATCACTaGAGTGAAGGAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQRWIHH*SEGGAG
Trigger: CCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCT...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp AGAAGGCCCAGGCCTGGCTCACTGATGGATCCCACAAGCGTGTACGGAGCCTCCAGATGGATCCATCACTaGAGTGAAGGAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRPRPGSLMDPTSVYGASRWIHH*SEGGAG
Trigger: CCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCT...GGAGGCTCCGTACACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAAGATGGATCCATCACTaGAGTGAAGGAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VFTAGHTTFPQAGRVHCPRWIHH*SEGGAG
Trigger: CCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCT...TGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGGGACAGCCCACCCACTaGAGGACCCTCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWGQPTH*RTLWAP
Trigger: TGGGGCCCAGAGGGTCCTGCAGTGGGTGGGCTGTCC...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TCCAGGTGGCCCCACAGAGAAAGCAAAGTGGCTTCTCAGAGTTGGGGGTTGGAGCCCCCGATGACCGAATaGCGCCTGCTTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRWPHRESKVASQSWGLEPPMTE*RLLSRD
Trigger: GTCTCTGGAAAGCAGGCGGCATTCGGTCATCGGGGG...CTCCAACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGTGGGGCCACCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCGCTTCCCGCAGGCCCTaGTTCCAGGCTTGTAGATCT +
Preference number: 4 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLASRRP*FQACRS
Trigger: AGATCTACAAGCCTGGAAGCAGGGCCTGCGGGAAGC...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCACTGTTACCGTaGACTCCTTCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGAGPLLP*TPSGLQ
Trigger: CTGCAGCCCAGAAGGAGTGCACGGTAACAGTGGCCC...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS-3UTR CCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACAGCCTAGAGAGACTTTaGTGTGTGATGCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHSLERL*CVMRHP
Trigger: GGGATGGCGCATCACACACCAAAGTCTCTCTAGGCT...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337566.9
CDS-3UTR CCA 90 bp CAAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCGCTTCGTCGAACTTaGCTGGCTGCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: QAGGHSWPCLTVQLETLSPLRRT*LAAAVT
Trigger: AGTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGG...AGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACACTGAGCTGGGCCCTGTaGGGGACGTGTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: QGPGRVFSVKVSGGPTATLSWAL*GTCQQS
Trigger: GCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAG...TGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCTGGCATCTGCTGAGCTaGGCCCTGTGGGGGACGTGT +
Preference number: 4 (lower is better)
Translates to: VVKSRVQEGSFQSRSVEAWHLLS*ALWGTC
Trigger: ACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCA...GGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAATGGCATCTGCTGAGCTaGGCCCTGTGGGGGACGTGT +
Preference number: 4 (lower is better)
Translates to: VKSRVQEGSFQSRSVEAQWHLLS*ALWGTC
Trigger: ACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCA...TTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCCTCACTGGAAGTGGTaGCATCTGCTGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SPGSRKGLFSQGQWRPNSPHWKW*HLLSWA
Trigger: GGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGG...GCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CTCACTGATGGATCCCACAAGCGTGTACGGAGCCTCCTTCTTTGGCAGCTCCTCCCTCACTGGAAGTGGTaGCATCTGCTGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LTDGSHKRVRSLLLWQLLPHWKW*HLLSWA
Trigger: GGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGG...GAGGAGCTGCCAAAGAAGGAGGCTCCGTACACGCTTGTGGGATCCATCAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGCCTCACTGGAAGTGGTaGCATCTGCTGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSGGPTATATDGSITAVKPHWKW*HLLSWA
Trigger: GGCCCAGCTCAGCAGATGCCACCACTTCCAGTGAGG...CTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CAAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTGCTCCTCACTGGAAGTaGTGGCATCTGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QAGGHSWPCLTVQLETLSAPHWK*WHLLSW
Trigger: CCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGC...AGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CCTCACACCTCCCCAACCTCCCTTTACTCACCAGGACCTGGCACTCAGGGGACATTGGCAGCTCCTCACTaGAAGTGGTGGCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: PHTSPTSLYSPGPGTQGTLAAPH*KWWHLL
Trigger: CAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAA...TGTCCCCTGAGTGCCAGGTCCTGGTGAGTAAAGGGAGGTTGGGGAGGTGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTTTGGCAGCTCCTCACTaGAAGTGGTGGCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSSQPAIPPSRRLVGSTLAAPH*KWWHLL
Trigger: CAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAA...AGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCAGCAGGGCCTAGATGGTaGAGGAGCGGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SFQSRSVEAQQPQPQMDPAGPRW*RSGASW
Trigger: CCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGC...TGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCAGCGAAAATGGACTTTaGTGTGTGATGCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: FTAGHTTFPQAGRVHCPASENGL*CVMRHP
Trigger: GGGATGGCGCATCACACACCAAAGTCCATTTTCGCT...GGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGACGTGCACTCCTTCTaGGCTGCAGCCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQDVHSF*AAAFDL
Trigger: AAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTC...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000432789.1
CDS-3UTR CCA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACCCATCAGGCACAGACTaGCCTAGGATTTGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHPSGTD*PRIWFA
Trigger: GGCAAACCAAATCCTAGGCCAGTCTGTGCCTGATGG...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CAAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTTTACTCACCAGGACCTaGCACTCAGGGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: QAGGHSWPCLTVQLETLSLLTRT*HSGDSP
Trigger: TGGGCTGTCCCCTGAGTGCCAGGTCCTGGTGAGTAA...AGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CTTAGCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGTGGCTTCTCAGAGTTaGGGGTTGGAGTCAACCCGG +
Preference number: 4 (lower is better)
Translates to: LSIGLSCCCLHSRPYHLPVASQS*GLESTR
Trigger: CCGGGTTGACTCCAACCCCCAACTCTGAGAAGCCAC...GGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTAGGCTTCATTCCAGCTaGAAAGGCCCCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLSSQPAIPPSRRLVGSTRLHSS*KGPQFS
Trigger: GGAGAACTGGGGGCCTTTCCAGCTGGAATGAAGCCT...AGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACACACTCTCCCTGCCCGTaGCTGAGTTGGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QVQGPGRVFSVKVSGGPTHSPCP*LSWAWF
Trigger: GAACCAGGCCCAACTCAGCCACGGGCAGGGAGAGTG...TGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGACAGATGCATCTTGTGTaGGGCCCGGAGGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: RVFSVKVSGGPTATATDGQMHLV*GPEAVP
Trigger: AGGGACGGCCTCCGGGCCCCACACAAGATGCATCTG...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGGAGGCCCAGGTCCGGTaGTACAGCCGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVPFVVKSRVQEGSFQSREAQVR*YSRVPA
Trigger: TGCAGGGACCCGGCTGTACCACCGGACCTGGGCCTC...CCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp ACACCACGCAGCGAAAATGGACAGACAGGGCCACCGGGTCGAATCTTGCCTTCCCGGCAATGGAGTCGTTaGGCTTCCTCTCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: TPRSENGQTGPPGRILPSRQWSR*ASSQTA
Trigger: GGCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCG...GGAAGGCAAGATTCGACCCGGTGGCCCTGTCTGTCCATTTTCGCTGCGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR TCA 90 bp GTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACCAGGCCTGGCTCACTaGTGGATCCCACAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: VKSRVQEGSFQSRSVEAQPGLAH*WIPQAC
Trigger: ACACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGG...TTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCTCATCTAGGAATGGATaGAACACCACGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPSSRNG*NTTQRK
Trigger: TTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGA...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp TTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACCTGAGGTGGTGGGGTaGGGGGCAGCCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FQSRSVEAQQPQPQMDPSPEVVG*GAATLF
Trigger: AAACAAGGTGGCTGCCCCTCACCCCACCACCTCAGG...TGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCTGCCAGGATCCACGGTaGGCTGGAGTCTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: VVKSRVQEGSFQSRSVEACQDPR*AGVCTQ
Trigger: CTGGGTACAGACTCCAGCTCACCGTGGATCCTGGCA...GGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCACAGAACACGTGTCTaGAGACTTGCCTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVHRTRV*RLACLS
Trigger: TGAGAGGCAGGCAAGTCTTCAGACACGTGTTCTGTG...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTATCCCACACCCACACCTaGTCCGCTTCGTCGAACTTG +
Preference number: 4 (lower is better)
Translates to: WWALLALPHCPARDTISLSHTHT*SASSNL
Trigger: CAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGA...TAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: SRKGLFSQGQWRPNSHSHSIGLS*CCLHSR
Trigger: CCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCT...GTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TCCAGGTGGCCCCACAGAGAAAGCAAAGTGGCTTCTCAGAGTTGGGGGTTGGAGAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: SRWPHRESKVASQSWGLESIGLS*CCLHSR
Trigger: CCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCT...CTCCAACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGTGGGGCCACCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: WWALLALPHCPARDTISLSIGLS*CCLHSR
Trigger: CCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCT...TAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCGGGCACTCCTGGCCTTaGCTCACTGTCCAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: FSVKVSGGPTATATDGSIGHSWP*LTVQLE
Trigger: CTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCC...GATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp AAGAAGCCTAGAGAGACGTGCACTCCTTCTGGGCTGCAGCCTTTGATCTTCCCAGGGCACTCCTGGCCTTaGCTCACTGTCCAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: KKPRETCTPSGLQPLIFPGHSWP*LTVQLE
Trigger: CTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCC...TGGGAAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTCTCTAGGCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR GCA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGACCCCCGATGACCGAATaGCGCCTGCTTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RVFSVKVSGGPTATATDGPPMTE*RLLSRD
Trigger: GTCTCTGGAAAGCAGGCGGCATTCGGTCATCGGGGG...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCACTAGGCTGTGTCCACTaGAGCCCACAGGCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: SFQSRSVEAQQPQPQMDPLGCVH*SPQARQ
Trigger: CTGACGGGCCTGTGGGCTGCAGTGGACACAGCCTAG...TGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TCCAGGTGGCCCCACAGAGAAAGCAAAGTGGCTTCTCAGAGTTGGGGGTTGGAGCCCTCCACACACACCTaGCTCTGCCAAGCACCAATG +
Preference number: 4 (lower is better)
Translates to: SRWPHRESKVASQSWGLEPSTHT*LCQAPM
Trigger: CATTGGTGCTTGGCAGAGGCAGGTGTGTGTGGAGGG...CTCCAACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGTGGGGCCACCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCAACTTTGGGCGGCCTCTaGCCCATAAGGGAGACTGAG +
Preference number: 4 (lower is better)
Translates to: WALLALPHCPARDTISLATLGGL*PIRETE
Trigger: CTCAGTCTCCCTTATGGGGCAGAGGCCGCCCAAAGT...TGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCGCTGGGGGCTCTaGGAACAGGAGGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: FQSRSVEAQQPQPQMDPSLRWGL*EQEGQS
Trigger: TGACTGACCCTCCTGTTCCCAGAGCCCCCAGCGCAG...TGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp ACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTACCGCTTCGTCGAACTTaGCTGGCTGCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: TATATDGSITAVKEEQGLPLRRT*LAAAVT
Trigger: AGTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGG...TAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCTCCTCACTGGAAGTaGTGGCATCTGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WWALLALPHCPARDTISLAPHWK*WHLLSW
Trigger: CCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGC...TAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACGCTCCTCACTGGAAGTaGTGGCATCTGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRKGLFSQGQWRPNSHSHAPHWK*WHLLSW
Trigger: CCAGCTCAGCAGATGCCACCACTTCCAGTGAGGAGC...GTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AAGCCTAGAGAGACGTGCACTCCTTCTGGGCTGCAGCCTTTGATCTTCCCAATGGCTGGTGGGCACTCCTaGCCTTGCCTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KPRETCTPSGLQPLIFPMAGGHS*PCLTVQ
Trigger: CTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGC...CATTGGGAAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTCTCTAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR CCA 90 bp CAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGAGCCACAGCCACAGATaGATCCATCACTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: QLLLSSQPAIPPSRRLVGSHSHR*IHHCSE
Trigger: TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCT...CCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AGGTCGTGTGCTCCTTCCTCCGTCTCGTACTCCCACACCCACACCTGCTCCGCTAGCCACAGCCACAGATaGATCCATCACTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RSCAPSSVSYSHTHTCSASHSHR*IHHCSE
Trigger: TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCT...AGCGGAGCAGGTGTGGGTGTGGGAGTACGAGACGGAGGAAGGAGCACACGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGAGCGAAAATGGACTTTaGTGTGTGATGCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: ASASAAVVFTAGHTTFPQSENGL*CVMRHP
Trigger: GGGATGGCGCATCACACACCAAAGTCCATTTTCGCT...CTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CCGTCTCGTACTCCCACACCCACACCTGCTCCGCTTCGTCGAACTTGGCTGGCTAGCGAAAATGGACTTTaGTGTGTGATGCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: PSRTPTPTPAPLRRTWLASENGL*CVMRHP
Trigger: GGGATGGCGCATCACACACCAAAGTCCATTTTCGCT...AGCCAGCCAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGAGTACGAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTGACGTGCACTCCTTCTaGGCTGCAGCCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCDVHSF*AAAFDL
Trigger: AAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTC...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGACACCTGGGTCTGACCTaGGCCATCAGGCACAGACTG +
Preference number: 4 (lower is better)
Translates to: RVFSVKVSGGPTATATDGHLGLT*AIRHRL
Trigger: CAGTCTGTGCCTGATGGCCCAGGTCAGACCCAGGTG...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCACTGCAGGACCCTCTaGGCCCCAGGAATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTHCRTL*APGIPC
Trigger: ACAGGGGATTCCTGGGGCCCAGAGGGTCCTGCAGTG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCAGTGGCTTCTCAGAGTTaGGGGTTGGAGTCAACCCGG +
Preference number: 4 (lower is better)
Translates to: WALLALPHCPARDTISLAVASQS*GLESTR
Trigger: CCGGGTTGACTCCAACCCCCAACTCTGAGAAGCCAC...TGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCTCCCAGAGCCCCAGATaGGTTCAGAAAATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LLLSSQPAIPPSRRLVGSSQSPR*VQKMKL
Trigger: GAGCTTCATTTTCTGAACCCATCTGGGGCTCTGGGA...GGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CCTCCTCTGCCTTATAACCTTACCCCCGCTTGCCTGACAGAAACATGGCATCAGCACTCTCCCTGCCCGTaGCTGAGTTGGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PPLPYNLTPACLTETWHQHSPCP*LSWAWF
Trigger: GAACCAGGCCCAACTCAGCCACGGGCAGGGAGAGTG...CTGATGCCATGTTTCTGTCAGGCAAGCGGGGGTAAGGTTATAAGGCAGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACCTCGGGGCCTCGTTTaGGTCTCATTCACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VKSRVQEGSFQSRSVEAQPRGLV*VSFTQA
Trigger: AGCCTGCGTGAATGAGACCCAAACGAGGCCCCGAGG...TTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CCTCCTCTGCCTTATAACCTTACCCCCGCTTGCCTGACAGAAACATGGCATCAGCAGATGCATCTTGTGTaGGGCCCGGAGGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: PPLPYNLTPACLTETWHQQMHLV*GPEAVP
Trigger: AGGGACGGCCTCCGGGCCCCACACAAGATGCATCTG...CTGATGCCATGTTTCTGTCAGGCAAGCGGGGGTAAGGTTATAAGGCAGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AGATCTAGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAAGCACCCCCTGGTGGCTaGGTGGGGCAGAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RSRTCARGFFLIMNVQQEAPPGG*VGQRVL
Trigger: GAGCACCCTCTGCCCCACCCAGCCACCAGGGGGTGC...TTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCTAGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCCCGCTACTACAAGGTaGGTCAGAGTTGATAGGGGC +
Preference number: 4 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLPATTR*VRVDRG
Trigger: GCCCCTATCAACTCTGACCCACCTTGTAGTAGCGGG...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCATGTGGCCTTAGGGTaGAAGCACCAGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLHVALG*KHQDHR
Trigger: TCTGTGGTCCTGGTGCTTCCACCCTAAGGCCACATG...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATGACCCAGGCATGTCCTaGGCTCCTGTGTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: GSFQSRSVEAQQPQPQMDDPGMS*APVSSM
Trigger: CATGCTGGACACAGGAGCCCAGGACATGCCTGGGTC...ATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TTGCTGGTCCACCAGGAGAGAAGGCCCAGGCCTGGCTCACTGATGGATCCCACAACCGTGCACTCCTTCTaGGCTGCAGCCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: LLVHQERRPRPGSLMDPTTVHSF*AAAFDL
Trigger: AAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGGT...TGTGGGATCCATCAGTGAGCCAGGCCTGGGCCTTCTCTCCTGGTGGACCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS-3UTR CCA 90 bp TGGGGGACGTGTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCGCGGCCCAGTACCTTGTTaGCCAACTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WGTCQQSSRPPPGSGSPRGPVPC*PTSCSA
Trigger: AGCTGAACAAGAAGTTGGCCAACAAGGTACTGGGCC...GCGAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGACACGTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR CCA 90 bp CCACCGGGTCGAATCTTGCCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTGGACGGCAGGGACCCTaGCATCAGCAGGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: PPGRILPSSDRFNPKHRLGRQGP*HQQGMR
Trigger: CCTCATGCCCTGCTGATGCCAGGGTCCCTGCCGTCC...AAGCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR TCA 90 bp CAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACACGGCAATGGAGTCGTTaGGCTTCCTCTCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: QGPGRVFSVKVSGGPTATRQWSR*ASSQTA
Trigger: GGCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCG...TGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp TCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCACCAGGCCTGGCTCACTaGTGGATCCCACAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: SFQSRSVEAQQPQPQMDPPGLAH*WIPQAC
Trigger: ACACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGG...TGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CAGAAAATGAAGCTCTCCAGGCTAGTCAGGCCCCCGATGACCGAATGCCGCCTGGTAGATCTGAGCCGCTaGGATCTAGGACATGTGCCA +
Preference number: 4 (lower is better)
Translates to: QKMKLSRLVRPPMTECRLVDLSR*DLGHVP
Trigger: TGGCACATGTCCTAGATCTCAGCGGCTCAGATCTAC...CAGGCGGCATTCGGTCATCGGGGGCCTGACTAGCCTGGAGAGCTTCATTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TCCAGGTGGCCCCACAGAGAAAGCAAAGTGGCTTCTCAGAGTTGGGGGTTGGAGTTACCCCCGCTTGCCTaGCAGAAACATGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: SRWPHRESKVASQSWGLELPPLA*QKHGIR
Trigger: CCTGATGCCATGTTTCTGTCAGGCAAGCGGGGGTAA...CTCCAACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGTGGGGCCACCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACAAACAGAACCAGGGCTaGACCCAAGTCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FSQGQWRPNSHSHRWIHHKQNQG*TQVLAQ
Trigger: CTGGGCCAGGACTTGGGTTCAGCCCTGGTTCTGTTT...GTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAAGGGTGAGCGAACATTaGCCTGTCCCAACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GQWRPNSHSHRWIHHCSERVSEH*PVPTLG
Trigger: GCCCAAAGTTGGGACAGGTCAATGTTCGCTCACCCT...TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp CTGATGGATCCCACAAGCGTGTACGGAGCCTCCTTCTTTGGCAGCTCCTCACTGTTCCCAAGTCTTGTCTaGGGCGTCAGGGCCACTGTT +
Preference number: 4 (lower is better)
Translates to: LMDPTSVYGASFFGSSSLFPSLV*GVRATV
Trigger: AACAGTGGCCCTGACGCCTCAGACAAGACTTGGGAA...CAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGTACACGCTTGTGGGATCCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS-3UTR GCA 90 bp GTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCTCCCACACCCACACCTaGTCCGCTTCGTCGAACTTG +
Preference number: 4 (lower is better)
Translates to: VFSVKVSGGPTATATDGSSHTHT*SASSNL
Trigger: CAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGA...GGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CTTAGCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCAGATGGATCCATCACTaGAGTGAAGGAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSIGLSCCCLHSRPYHLPRWIHH*SEGGAG
Trigger: CCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCT...GGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GTCCACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATGTAGAGGTCGTGTGCAGTGATTGGTGTCTGTaGCGTTTGTTGTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VHHPEADLLAGVHVEVVCSDWCL*RLLSSP
Trigger: TGGACTTGACAACAAACGGCACAGACACCAATCACT...GCACACGACCTCTACATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCCTTGTTTCCCCTCCTaGACTGGCCCCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTPCFPS*TGPRVA
Trigger: AGCTACCCTGGGGCCAGTGCAGGAGGGGAAACAAGG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATGCTTCCCGCAGGCCCTaGTTCCAGGCTTGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GSFQSRSVEAQQPQPQMDASRRP*FQACRS
Trigger: AGATCTACAAGCCTGGAAGCAGGGCCTGCGGGAAGC...ATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCACACACACCTGCCTCTaGCAAGCACCAATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFSVKVSGGPTATATDGSTHTCL*QAPMGG
Trigger: GCCACCCATTGGTGCTTGGCAGAGGCAGGTGTGTGT...GGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATAAGCCCAAAGGGGACTaGTGTGGAAGGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GSFQSRSVEAQQPQPQMDKPKGD*CGREER
Trigger: CCTCTCCTCCCTTCCACAGCAGTCCCCTTTGGGCTT...ATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCACTCCTGAAGGGGCCTaGAAGGCAGGTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DCSVSDWCLCRLLSSPGSTPEGA*KAGAGR
Trigger: CCTCCCTGCACCTGCCTTGCAGGCCCCTTCAGGAGT...GGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp ACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTATTGGCAGCTCCTCACTaGAAGTGGTGGCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TATATDGSITAVKEEQGLLAAPH*KWWHLL
Trigger: CAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAA...TAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GGGGCCCTCACACCTCCCCAACCTCCCTTTACTCACCAGGACCTGGCACTCAGGTGTTCTGTGAGTGATTaGTGTCTGTGCCGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GALTPPQPPFTHQDLALRCSVSD*CLCRLL
Trigger: CAACAAACGGCACAGACACCAATCACTCACAGAACA...CCTGAGTGCCAGGTCCTGGTGAGTAAAGGGAGGTTGGGGAGGTGTGAGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCACCTGGGTCTGACCTaGGCCATCAGGCACAGACTG +
Preference number: 4 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTHLGLT*AIRHRL
Trigger: CAGTCTGTGCCTGATGGCCCAGGTCAGACCCAGGTG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGAGGCTTCATTCCAGCTaGAAAGGCCCCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QSRSVEAQQPQPQMDPSLRLHSS*KGPQFS
Trigger: GGAGAACTGGGGGCCTTTCCAGCTGGAATGAAGCCT...CAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAAGCACCAATGGGTaGCTTCTGTCTTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCPSTNG*LLSSLP
Trigger: TGGCAAAGAAGACAGAAGCCACCCATTGGTGCTTGG...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTGACCCAGGCATGTCCTaGGCTCCTGTGTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: VSDWCLCRLLSSPGSRKGDPGMS*APVSSM
Trigger: CATGCTGGACACAGGAGCCCAGGACATGCCTGGGTC...ACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
3UTR CAA 72 bp CCTCTGCCAAGCACCAATGGGTGGCTTCTGTCTTCTTaGCCACTGCAAACAACCACGTGCCTCTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PLPSTNGWLLSS*PLQTTTCLCPL
Trigger: GAGGGGACAGAGGCACGTGGTTGTTTGCAGTGGCAAAGAAGACAGAAGCCACCCATTGGTGCTTGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp CTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCTCATCTAGGAATGGATaGAACACCACGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: LLLSSQPAIPPSRRLVGSSSRNG*NTTQRK
Trigger: TTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGA...GGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACACACAGAACACGTGTCTaGAGACTTGCCTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: QGPGRVFSVKVSGGPTATHRTRV*RLACLS
Trigger: TGAGAGGCAGGCAAGTCTTCAGACACGTGTTCTGTG...TGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGAAGGGTGAGCGAACATTaGCCTGTCCCAACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RVFSVKVSGGPTATATDGRVSEH*PVPTLG
Trigger: GCCCAAAGTTGGGACAGGTCAATGTTCGCTCACCCT...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp AAGAAGCCTAGAGAGACGTGCACTCCTTCTGGGCTGCAGCCTTTGATCTTCCCATCACCCTTTGGTGTGTaGTGCGCCATCCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: KKPRETCTPSGLQPLIFPSPFGV*CAIPRE
Trigger: TTCCCTGGGGATGGCGCATCACACACCAAAGGGTGA...TGGGAAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTCTCTAGGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR GCA 90 bp CAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACACATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: QGPGRVFSVKVSGGPTATHVEVV*SFLRLV
Trigger: TACGAGACGGAGGAAGGAGCACACGACCTCTACATG...TGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TCCAGGTGGCCCCACAGAGAAAGCAAAGTGGCTTCTCAGAGTTGGGGGTTGGAGCATGTAGAGGTCGTGTaGTCCTTCCTCCGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: SRWPHRESKVASQSWGLEHVEVV*SFLRLV
Trigger: TACGAGACGGAGGAAGGAGCACACGACCTCTACATG...CTCCAACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGTGGGGCCACCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTAGCCCCAGGGCTAGTTaGTGGTCCACCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: VSDWCLCRLLSSPGSRKGSPRAS*WSTRRE
Trigger: TTCTCTCCTGGTGGACCAGCAACTAGCCCTGGGGCT...ACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCAAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: FQSRSVEAQQPQPQMDPSSIGLS*CCLHSR
Trigger: CCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCT...TGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp AGGCCCCCGATGACCGAATGCCGCCTGCTTTCCAGAGACCAACCTGAAGAAACACTTAGGCTCACACAGTaGACATCCGACGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RPPMTECRLLSRDQPEETLRLTQ*TSDAQL
Trigger: AAGCTGAGCGTCGGATGTGCACTGTGTGAGCCTAAG...TGTTTCTTCAGGTTGGTCTCTGGAAAGCAGGCGGCATTCGGTCATCGGGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATGACGGTGCCCTCCTCTaGCTTATAACCTTACCCCCG +
Preference number: 4 (lower is better)
Translates to: LFSQGQWRPNSHSHRWIHDGALL*LITLPP
Trigger: CGGGGGTAAGGTTATAAGGCAGAGGAGGGCACCGTC...ATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCTGTCTTCTTTGCCACTaGAAACAACCACGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSSQPAIPPSRRLVGSTVCLLCH*KQPRAS
Trigger: AGAGGCACGTGGTTGTTTGCAGTGGCAAAGAAGACA...GACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCCCTCCACACACACCTaGCTCTGCCAAGCACCAATG +
Preference number: 4 (lower is better)
Translates to: VSDWCLCRLLSSPGSRKGPSTHT*LCQAPM
Trigger: CATTGGTGCTTGGCAGAGGCAGGTGTGTGTGGAGGG...ACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCAAAGCCCAAAGGGGACTaGTGTGGAAGGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FQSRSVEAQQPQPQMDPSKPKGD*CGREER
Trigger: CCTCTCCTCCCTTCCACAGCAGTCCCCTTTGGGCTT...TGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGTGTACACGACCTTGTTaGCCAACTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSQPAIPPSRRLVGSTVQCTRPC*PTSCSA
Trigger: AGCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACA...CTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
CDS-3UTR CCA 90 bp GTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCCGCTTCGTCGAACTTaGCTGGCTGCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: VSDWCLCRLLSSPGSRKGPLRRT*LAAAVT
Trigger: AGTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGG...ACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGCTGAGCTGGGCCCTGTaGGGGACGTGTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWLSWAL*GTCQQS
Trigger: GCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAG...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGACGTGCACTCCTTCTaGGCTGCAGCCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGADVHSF*AAAFDL
Trigger: AAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTC...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000432789.1
CDS-3UTR CCA 90 bp TTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCTTACTCACCAGGACCTaGCACTCAGGGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSVKVSGGPTATATDGSILLTRT*HSGDSP
Trigger: TGGGCTGTCCCCTGAGTGCCAGGTCCTGGTGAGTAA...GATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGCCCCAGTTCTCCAGGTaGCCCCACAGAGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: KGLFSQGQWRPNSHSHRWPQFSR*PHRESK
Trigger: TTTGCTTTCTCTGTGGGGCCACCTGGAGAACTGGGG...CCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAAAGGACATTAGGGGAGTaGAAACTGGGAAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VKSRVQEGSFQSRSVEAQRTLGE*KLGRRP
Trigger: CGGCCTCCTTCCCAGTTTCCACTCCCCTAATGTCCT...TTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGACCCGCTACTACAAGGTaGGTCAGAGTTGATAGGGGC +
Preference number: 4 (lower is better)
Translates to: RVFSVKVSGGPTATATDGPATTR*VRVDRG
Trigger: GCCCCTATCAACTCTGACCCACCTTGTAGTAGCGGG...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AAGAAGCCTAGAGAGACGTGCACTCCTTCTGGGCTGCAGCCTTTGATCTTCCCAGGACCTCTCACCCTTTaGTGTGTGATGCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: KKPRETCTPSGLQPLIFPGPLTL*CVMRHP
Trigger: GGGATGGCGCATCACACACCAAAGGGTGAGAGGTCC...TGGGAAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTCTCTAGGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR TCA 90 bp GTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCGGCAATGGAGTCGTTaGGCTTCCTCTCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: VSDWCLCRLLSSPGSRKGRQWSR*ASSQTA
Trigger: GGCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCG...ACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp ATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCACCAGGCCTGGCTCACTaGTGGATCCCACAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: IGVCAVCCQVQGPGRVFSPGLAH*WIPQAC
Trigger: ACACGCTTGTGGGATCCATCAGTGAGCCAGGCCTGG...TGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CCTCACACCTCCCCAACCTCCCTTTACTCACCAGGACCTGGCACTCAGGGGACATCATCTAGGAATGGATaGAACACCACGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: PHTSPTSLYSPGPGTQGTSSRNG*NTTQRK
Trigger: TTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGA...TGTCCCCTGAGTGCCAGGTCCTGGTGAGTAAAGGGAGGTTGGGGAGGTGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp GCCGGTGTCCATGTAGAGGTCGTGTGCTCCTTCCTCCGTCTCGTACTCCCACACTCATCTAGGAATGGATaGAACACCACGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: AGVHVEVVCSFLRLVLPHSSRNG*NTTQRK
Trigger: TTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGA...GTGTGGGAGTACGAGACGGAGGAAGGAGCACACGACCTCTACATGGACACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCACTCCCTGCCCGTGGCTaGGTTGGGCCTGGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SKTSDCSVSDWCLCRLLSLPARG*VGPGSR
Trigger: CCTAGAACCAGGCCCAACTCAGCCACGGGCAGGGAG...TGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TGCTCCTTCCTCCGTCTCGTACTCCCACACCCACACCTGCTCCGCTTCGTCGAAGGTGAAGAAAAGTTCTaGGACATTAAGCTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: CSFLRLVLPHPHLLRFVEGEEKF*DIKLLA
Trigger: GGCAAGCAGCTTAATGTCTCAGAACTTTTCTTCACC...TTCGACGAAGCGGAGCAGGTGTGGGTGTGGGAGTACGAGACGGAGGAAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR GCA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGCATCGGCCTCAGCTaGTGTTGTCTTCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWSIGLS*CCLHSR
Trigger: CCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCT...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CAGAAAATGAAGCTCTCCAGGCTAGTCAGGCCCCCGATGACCGAATGCCGCCTGGGCTTCTGTCTTCTTTaGCACTGCAAACAACCACGT +
Preference number: 4 (lower is better)
Translates to: QKMKLSRLVRPPMTECRLGFCLL*HCKQPR
Trigger: ACGTGGTTGTTTGCAGTGGCAAAGAAGACAGAAGCC...CAGGCGGCATTCGGTCATCGGGGGCCTGACTAGCCTGGAGAGCTTCATTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATACGTGTCTGAAGACTTaGCTGCCTCTCACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFSQGQWRPNSHSHRWIHTCLKT*LPLTPL
Trigger: CAGAGGGGTGAGAGGCAGGCAAGTCTTCAGACACGT...ATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp AAACACCACGCAGCGAAAATGGACAGACAGGGCCACCGGGTCGAATCTTGCCTTCACAGGCTTCCACGATaGCGTCAACCATTTAGTCGG +
Preference number: 4 (lower is better)
Translates to: KHHAAKMDRQGHRVESCLHRLPR*RQPFSR
Trigger: CCGACTAAATGGTTGACGGCATCGTGGAAGCCTGTG...AAGGCAAGATTCGACCCGGTGGCCCTGTCTGTCCATTTTCGCTGCGTGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CCA 90 bp GTAGAGGTCGTGTGCTCCTTCCTCCGTCTCGTACTCCCACACCCACACCTGCTCTGTACACGACCTTGTTaGCCAACTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VEVVCSFLRLVLPHPHLLCTRPC*PTSCSA
Trigger: AGCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACA...GAGCAGGTGTGGGTGTGGGAGTACGAGACGGAGGAAGGAGCACACGACCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS-3UTR CCA 90 bp TGGATCCCACAAGCGTGTACGGAGCCTCCTTCTTTGGCAGCTCCTCACTGGAAGAGCCACAGCCACAGATaGATCCATCACTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: WIPQACTEPPSLAAPHWKSHSHR*IHHCSE
Trigger: TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCT...CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGTACACGCTTGTGGGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACGACGTGCACTCCTTCTaGGCTGCAGCCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: FSQGQWRPNSHSHRWIHHDVHSF*AAAFDL
Trigger: AAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTC...GTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000432789.1
CDS-3UTR CCA 90 bp AGATCTAGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAACACTGCAGGACCCTCTaGGCCCCAGGAATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RSRTCARGFFLIMNVQQEHCRTL*APGIPC
Trigger: ACAGGGGATTCCTGGGGCCCAGAGGGTCCTGCAGTG...TTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCTAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGGGATCCACGGTGAGCTaGAGTCTGTACCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SVPFVVKSRVQEGSFQSRGSTVS*SLYPGH
Trigger: ATGGCCTGGGTACAGACTCCAGCTCACCGTGGATCC...CCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCACCAAGCACCAATGGGTaGCTTCTGTCTTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: WALLALPHCPARDTISLAPSTNG*LLSSLP
Trigger: TGGCAAAGAAGACAGAAGCCACCCATTGGTGCTTGG...TGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GGAGTTAGTGAGAGATATCTTAGGATATCTGGCCCTAGACAAAGACAAGGAAGGGACTCTGGCACCCCCTaGTGGCTGGGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GVSERYLRISGPRQRQGRDSGTP*WLGGAE
Trigger: CTCTGCCCCACCCAGCCACCAGGGGGTGCCAGAGTC...CCTTCCTTGTCTTTGTCTAGGGCCAGATATCCTAAGATATCTCTCACTAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCAAGGACATTAGGGGAGTaGAAACTGGGAAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: FQSRSVEAQQPQPQMDPSRTLGE*KLGRRP
Trigger: CGGCCTCCTTCCCAGTTTCCACTCCCCTAATGTCCT...TGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCATGTGGCCTTAGGGTaGAAGCACCAGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTHVALG*KHQDHR
Trigger: TCTGTGGTCCTGGTGCTTCCACCCTAAGGCCACATG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGATGGACTTTGGTGTGTaGTGCGCCATCCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWMDFGV*CAIPRE
Trigger: TTCCCTGGGGATGGCGCATCACACACCAAAGTCCAT...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCAGATGGATCCATCACTaGAGTGAAGGAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FSVKVSGGPTATATDGSIRWIHH*SEGGAG
Trigger: CCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCT...GATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CTTAGCATCGGCCTCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCAGTGATTGGTGTCTGTaGCGTTTGTTGTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LSIGLSCCCLHSRPYHLPSDWCL*RLLSSP
Trigger: TGGACTTGACAACAAACGGCACAGACACCAATCACT...GGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCGATGCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp TCTCCTCGCCGGTGTCCATGTAGAGGTCGTGTGCTCCTTCCTCCGTCTCGTACTAGTGATTGGTGTCTGTaGCGTTTGTTGTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPRRCPCRGRVLLPPSRTSDWCL*RLLSSP
Trigger: TGGACTTGACAACAAACGGCACAGACACCAATCACT...AGTACGAGACGGAGGAAGGAGCACACGACCTCTACATGGACACCGGCGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAAACCTTACCCCCGCTTaGCTGACAGAAACATGGCAT +
Preference number: 4 (lower is better)
Translates to: QVQGPGRVFSVKVSGGPTNLTPA*LTETWH
Trigger: ATGCCATGTTTCTGTCAGGCAAGCGGGGGTAAGGTT...TGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGGGCTTCTGTCTTCTTTaGCACTGCAAACAACCACGT +
Preference number: 4 (lower is better)
Translates to: QSRSVEAQQPQPQMDPSLGFCLL*HCKQPR
Trigger: ACGTGGTTGTTTGCAGTGGCAAAGAAGACAGAAGCC...CAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp ATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAACACACACCTGCCTCTaGCAAGCACCAATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: IGVCAVCCQVQGPGRVFSTHTCL*QAPMGG
Trigger: GCCACCCATTGGTGCTTGGCAGAGGCAGGTGTGTGT...TGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGCTTGAGCTTCACAGATaGATCTTGTGTGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWLELHR*ILCGAR
Trigger: CCGGGCCCCACACAAGATGCATCTGTGAAGCTCAAG...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp ATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCACCGCTTCGTCGAACTTaGCTGGCTGCTGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: IGVCAVCCQVQGPGRVFSPLRRT*LAAAVT
Trigger: AGTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGG...TGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTTGGCAGCTCCTCACTaGAAGTGGTGGCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVPFVVKSRVQEGSFQSRLAAPH*KWWHLL
Trigger: CAGCAGATGCCACCACTTCCAGTGAGGAGCTGCCAA...CCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp GTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCAGCCACAGCCACAGATaGATCCATCACTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VVKSRVQEGSFQSRSVEASHSHR*IHHCSE
Trigger: TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCT...GGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp TCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCACCATCAGGCACAGACTaGCCTAGGATTTGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SFQSRSVEAQQPQPQMDPPSGTD*PRIWFA
Trigger: GGCAAACCAAATCCTAGGCCAGTCTGTGCCTGATGG...TGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCACTCAGAGTTGGGGGTTaGAGTCAACCCGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SKTSDCSVSDWCLCRLLSLRVGG*SQPGAL
Trigger: GAGGGCCCCGGGTTGACTCCAACCCCCAACTCTGAG...TGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCATCTGCCAAGCACCAATaGGTGGCTTCTGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: WALLALPHCPARDTISLASAKHQ*VASVFF
Trigger: AAAGAAGACAGAAGCCACCCATTGGTGCTTGGCAGA...TGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GAATCTTGCCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTCCACGATGCCAGGAGAGGCAGCCGATaGACCTCTCACCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: ESCLPQTGLIPNTGFHDARRGSR*TSHPLV
Trigger: CACCAAAGGGTGAGAGGTCCATCGGCTGCCTCTCCT...GGCATCGTGGAAGCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
3UTR CAA 72 bp AGCGAAAATGGACAGACAGGGCCACCGGGTCGAATCTaGCCTTCCTCAGACAGGTTTAATCCCAAACACAGG +
Preference number: 4 (lower is better)
Translates to: SENGQTGPPGRI*PSSDRFNPKHR
Trigger: CCTGTGTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTGGCCCTGTCTGTCCATTTTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR TCA 90 bp ATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCACGGCAATGGAGTCGTTaGGCTTCCTCTCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: IGVCAVCCQVQGPGRVFSRQWSR*ASSQTA
Trigger: GGCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCG...TGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp ATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCATTACCCCCGCTTGCCTaGCAGAAACATGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: IGVCAVCCQVQGPGRVFSLPPLA*QKHGIR
Trigger: CCTGATGCCATGTTTCTGTCAGGCAAGCGGGGGTAA...TGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp AGATCTAGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAAAAACAGAACCAGGGCTaGACCCAAGTCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RSRTCARGFFLIMNVQQEKQNQG*TQVLAQ
Trigger: CTGGGCCAGGACTTGGGTTCAGCCCTGGTTCTGTTT...TTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCTAGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAAGTGATTGGTGTCTGTaGCGTTTGTTGTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: QWRPNSHSHRWIHHCSEGSDWCL*RLLSSP
Trigger: TGGACTTGACAACAAACGGCACAGACACCAATCACT...TCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp AAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGTGTCTTCTTTGCCACTaGAAACAACCACGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KGLFSQGQWRPNSHSHRWCLLCH*KQPRAS
Trigger: AGAGGCACGTGGTTGTTTGCAGTGGCAAAGAAGACA...CCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TCATCGAAGAAGCCTAGAGAGACGTGCACTCCTTCTGGGCTGCAGCCTTTGATCCACCGGGTCGAATCTTaGCTTCCTCAGACAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SSKKPRETCTPSGLQPLIHRVES*LPQTGL
Trigger: TAAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTG...GATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTCTCTAGGCTTCTTCGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CCA 90 bp TCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACTGTACACGACCTTGTTaGCCAACTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SRKGLFSQGQWRPNSHSHCTRPC*PTSCSA
Trigger: AGCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACA...GTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CCA 90 bp CAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACATGTACACGACCTTGTTaGCCAACTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QGPGRVFSVKVSGGPTATCTRPC*PTSCSA
Trigger: AGCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACA...TGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CCA 90 bp GCAGCGAAAATGGACAGACAGGGCCACCGGGTCGAATCTTGCCTTCCTCAGACATGTACACGACCTTGTTaGCCAACTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AAKMDRQGHRVESCLPQTCTRPC*PTSCSA
Trigger: AGCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACA...TGTCTGAGGAAGGCAAGATTCGACCCGGTGGCCCTGTCTGTCCATTTTCGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CCA 90 bp CACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATGGTGTTCTGTGAGTGATTaGTGTCTGTGCCGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: HSHRWIHHCSEGGAGPRWCSVSD*CLCRLL
Trigger: CAACAAACGGCACAGACACCAATCACTCACAGAACA...CCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACATGTTCTGTGAGTGATTaGTGTCTGTGCCGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QGPGRVFSVKVSGGPTATCSVSD*CLCRLL
Trigger: CAACAAACGGCACAGACACCAATCACTCACAGAACA...TGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTCCACGATGCCGTCAACCAGACGTGCACTCCTTCTaGGCTGCAGCCTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: PSSDRFNPKHRLPRCRQPDVHSF*AAAFDL
Trigger: AAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTC...TGGTTGACGGCATCGTGGAAGCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CCA 90 bp GGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATACAGAGAAAGCAAAGTaGCTTCTCAGAGTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GSFQSRSVEAQQPQPQMDTEKAK*LLRVGG
Trigger: ACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGT...ATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGAACAGAGAAAGCAAAGTaGCTTCTCAGAGTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RVFSVKVSGGPTATATDGTEKAK*LLRVGG
Trigger: ACCCCCAACTCTGAGAAGCCACTTTGCTTTCTCTGT...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCATTTCCCCTCCTGCACTaGCCCCAGGGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKTSDCSVSDWCLCRLLSFPLLH*PQGSFS
Trigger: GGAGAAGCTACCCTGGGGCCAGTGCAGGAGGGGAAA...TGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTCTGCCAAGCACCAATaGGTGGCTTCTGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FSQGQWRPNSHSHRWIHHSAKHQ*VASVFF
Trigger: AAAGAAGACAGAAGCCACCCATTGGTGCTTGGCAGA...GTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp GGAGTTAGTGAGAGATATCTTAGGATATCTGGCCCTAGACAAAGACAAGGAAGGCCTGCTGCCTGCCTCTaGAGGGCTTGTCATCCACCC +
Preference number: 4 (lower is better)
Translates to: GVSERYLRISGPRQRQGRPAACL*RACHPP
Trigger: GGGTGGATGACAAGCCCTCCAGAGGCAGGCAGCAGG...CCTTCCTTGTCTTTGTCTAGGGCCAGATATCCTAAGATATCTCTCACTAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTACATCCTCCAGTTTGGTaGTATCAAACAGACAAATGC +
Preference number: 4 (lower is better)
Translates to: WWALLALPHCPARDTISLHPPVW*YQTDKC
Trigger: GCATTTGTCTGTTTGATATCACCAAACTGGAGGATG...TAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATGGCATCCTCCAGTTTGGTaGTATCAAACAGACAAATGC +
Preference number: 4 (lower is better)
Translates to: HSHRWIHHCSEGGAGPRWHPPVW*YQTDKC
Trigger: GCATTTGTCTGTTTGATATCACCAAACTGGAGGATG...CCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp GTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCAGTGATTGGTGTCTGTaGCGTTTGTTGTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VVKSRVQEGSFQSRSVEASDWCL*RLLSSP
Trigger: TGGACTTGACAACAAACGGCACAGACACCAATCACT...GGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR GCA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAACCTTACCCCCGCTTaGCTGACAGAAACATGGCAT +
Preference number: 4 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWNLTPA*LTETWH
Trigger: ATGCCATGTTTCTGTCAGGCAAGCGGGGGTAAGGTT...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAGACGGTGCCCTCCTCTaGCTTATAACCTTACCCCCG +
Preference number: 4 (lower is better)
Translates to: SKTSDCSVSDWCLCRLLSDGALL*LITLPP
Trigger: CGGGGGTAAGGTTATAAGGCAGAGGAGGGCACCGTC...TGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp TTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGAGCCACAGCCACAGATaGATCCATCACTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LVSVPFVVKSRVQEGSFQSHSHR*IHHCSE
Trigger: TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCT...CTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp AAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGTGTTCTGTGAGTGATTaGTGTCTGTGCCGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KGLFSQGQWRPNSHSHRWCSVSD*CLCRLL
Trigger: CAACAAACGGCACAGACACCAATCACTCACAGAACA...CCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CCA 90 bp CATGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTAAGCGAAAATGGACTTTaGTGTGTGATGCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: HALTSVLSTYHPRSKGSVSENGL*CVMRHP
Trigger: GGGATGGCGCATCACACACCAAAGTCCATTTTCGCT...TACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp CATGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTATCCCAGAGCCCCAGATaGGTTCAGAAAATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HALTSVLSTYHPRSKGSVSQSPR*VQKMKL
Trigger: GAGCTTCATTTTCTGAACCCATCTGGGGCTCTGGGA...TACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAATGGACTTTGGTGTGTaGTGCGCCATCCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SKTSDCSVSDWCLCRLLSMDFGV*CAIPRE
Trigger: TTCCCTGGGGATGGCGCATCACACACCAAAGTCCAT...TGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp CTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATTCATCTAGGAATGGATaGAACACCACGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: LFSQGQWRPNSHSHRWIHSSRNG*NTTQRK
Trigger: TTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGA...ATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp AGACAGGGCCACCGGGTCGAATCTTGCCTTCCTCAGACAGGTTTAATCCCAAACTCATCTAGGAATGGATaGAACACCACGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: RQGHRVESCLPQTGLIPNSSRNG*NTTQRK
Trigger: TTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGA...GTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTGGCCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR GCA 90 bp TGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCATATCAAACAGACAAATaGAGAGTCCCACGTTGTACA +
Preference number: 4 (lower is better)
Translates to: WALLALPHCPARDTISLAYQTDK*RVPRCT
Trigger: TGTACAACGTGGGACTCTGCATTTGTCTGTTTGATA...TGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CAA 72 bp GACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTaGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: DCSVSDWCLCRL*SSPGSRKGLFS
Trigger: ACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CAA 72 bp AGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SDCSVSDWCLCR*LSSPGSRKGLF
Trigger: GAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
3UTR CAA 72 bp CCTAGAGAGACGTGCACTCCTTCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATCTCATCTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: PRETCTPSGLQP*IFPMRISSRNG
Trigger: TCCATTCCTAGATGAGATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR TCA 90 bp GTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCATCCTCCAGTTTGGTaGTATCAAACAGACAAATGC +
Preference number: 4 (lower is better)
Translates to: VSDWCLCRLLSSPGSRKGHPPVW*YQTDKC
Trigger: GCATTTGTCTGTTTGATATCACCAAACTGGAGGATG...ACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR TCA 90 bp GGAGTTAGTGAGAGATATCTTAGGATATCTGGCCCTAGACAAAGACAAGGAAGGGTAGATCTGAGCCGCTaGGATCTAGGACATGTGCCA +
Preference number: 4 (lower is better)
Translates to: GVSERYLRISGPRQRQGRVDLSR*DLGHVP
Trigger: TGGCACATGTCCTAGATCTCAGCGGCTCAGATCTAC...CCTTCCTTGTCTTTGTCTAGGGCCAGATATCCTAAGATATCTCTCACTAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp GGAGTTAGTGAGAGATATCTTAGGATATCTGGCCCTAGACAAAGACAAGGAAGGCTTAGGCTCACACAGTaGACATCCGACGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GVSERYLRISGPRQRQGRLRLTQ*TSDAQL
Trigger: AAGCTGAGCGTCGGATGTGCACTGTGTGAGCCTAAG...CCTTCCTTGTCTTTGTCTAGGGCCAGATATCCTAAGATATCTCTCACTAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp CACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATGGGATATTTATTTATGCTaGTTATTAAGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HSHRWIHHCSEGGAGPRWDIYLC*LLRGLQ
Trigger: CTGGAGACCCCTTAATAAGCAGCATAAATAAATATC...CCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR GCA 90 bp AGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGATATTTATTTATGCTaGTTATTAAGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPNSHSHRWIHHCSEGGADIYLC*LLRGLQ
Trigger: CTGGAGACCCCTTAATAAGCAGCATAAATAAATATC...TGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CCA 90 bp AGATCTAGGACATGTGCCAGGGGGTTCTTTCTGATCATGAATGTGCAGCAGGAATGTACACGACCTTGTTaGCCAACTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RSRTCARGFFLIMNVQQECTRPC*PTSCSA
Trigger: AGCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACA...TTCCTGCTGCACATTCATGATCAGAAAGAACCCCCTGGCACATGTCCTAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR TCA 90 bp TTAATCCCAAACACAGGCTTCCACGATGCCGTCAACCATTTAGTCGGCCAACATCATCCTCCAGTTTGGTaGTATCAAACAGACAAATGC +
Preference number: 4 (lower is better)
Translates to: LIPNTGFHDAVNHLVGQHHPPVW*YQTDKC
Trigger: GCATTTGTCTGTTTGATATCACCAAACTGGAGGATG...ATGTTGGCCGACTAAATGGTTGACGGCATCGTGGAAGCCTGTGTTTGGGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS CCA 90 bp CCCACGGCCAGGGCTTGGCATGACCGAGGCCGGGCCTGCGGCCAGTaGGCGGCGCTCGCTCTCCCACGCCAAGGCCTGCCCGCGAGCCGT +
Preference number: 5 (lower is better)
Translates to: PTARAWHDRGRACGQ*AALALPRQGLPASR
Trigger: ACGGCTCGCGGGCAGGCCTTGGCGTGGGAGAGCGAGCGCCGCCCACTGGCCGCAGGCCCGGCCTCGGTCATGCCAAGCCCTGGCCGTGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS GCA 90 bp AGCTGCTTGCCCACGGCCAGGGCTTGGCATGACCGAGGCCGGGCCTaGGGCCAGTGGGCGGCGCTCGCTCTCCCACGCCAAGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SCLPTARAWHDRGRA*GQWAALALPRQGLP
Trigger: GGGCAGGCCTTGGCGTGGGAGAGCGAGCGCCGCCCACTGGCCGCAGGCCCGGCCTCGGTCATGCCAAGCCCTGGCCGTGGGCAAGCAGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR CAA 90 bp GGAGCAGGGCCTAGATGGTGGAGGAGCGGGGCAAGCTGGTGGGCACTCCTGGCCAGGCTGGCGGTGAGGTaGCACGGGGCGGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: GAGPRWWRSGASWWALLARLAVR*HGAVSG
Trigger: CCCCGAGACCGCCCCGTGCAACCTCACCGCCAGCCT...GGCCAGGAGTGCCCACCAGCTTGCCCCGCTCCTCCACCATCTAGGCCCTGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS GCA 90 bp GGGCCTGCGGCCAGTGGGCGGCGCTCGCTCTCCCACGCCAAGGCCTaGCCGCGAGCCGTGGGCCCAGTACCTTGTTGGCCAACTTCTTGT +
Preference number: 5 (lower is better)
Translates to: GPAASGRRSLSHAKA*PRAVGPVPCWPTSC
Trigger: ACAAGAAGTTGGCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGGCCTTGGCGTGGGAGAGCGAGCGCCGCCCACTGGCCGCAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS GCA 90 bp ATCCGGACGGTGTCCACCATTTCCACCAGGACGAACATCCCGGCCTaGGCTGGGGGCTCACGCACCACGCACCGCGCACAGCCGCTCGCG +
Preference number: 5 (lower is better)
Translates to: IRTVSTISTRTNIPA*AGGSRTTHRAQPLA
Trigger: CGCGAGCGGCTGTGCGCGGTGCGTGGTGCGTGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTGGAAATGGTGGACACCGTCCGGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396504.6
ENST00000442616.1
ENST00000483837.1
CDS CCA 90 bp GACGGTGTCCACCATTTCCACCAGGACGAACATCCCGGCCTGCGCTaGGGGCTCACGCACCACGCACCGCGCACAGCCGCTCGCGCTTGC +
Preference number: 5 (lower is better)
Translates to: DGVHHFHQDEHPGLR*GLTHHAPRTAARAC
Trigger: GCAAGCGCGAGCGGCTGTGCGCGGTGCGTGGTGCGTGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTGGAAATGGTGGACACCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396504.6
ENST00000483837.1
CDS CCA 90 bp CACCATTTCCACCAGGACGAACATCCCGGCCTGCGCTGGGGGCTCTaGGAACAGGAGGGTCAGTCACGCACCAGGGCCGGGGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: HHFHQDEHPGLRWGL*EQEGQSRTRAGGRE
Trigger: CTCCCTGCCCCCGGCCCTGGTGCGTGACTGACCCTCCTGTTCCCAGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTGGAAATGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000420561.1
ENST00000431534.5
ENST00000432789.1
CDS CCA 90 bp GTGGGCGGCGCTCGCTCTCCCACGCCAAGGCCTGCCCGCGAGCCGTaGGCCCAGTACCTTGTTGGCCAACTTCTTGTTCAGCTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: VGGARSPTPRPAREP*AQYLVGQLLVQLLG
Trigger: GCCGAGGAGCTGAACAAGAAGTTGGCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGGCCTTGGCGTGGGAGAGCGAGCGCCGCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR CAA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGCCCTCGGGGCCTCGTTaGGGTCTCATTCACGCAGGC +
Preference number: 5 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGPSGPR*GLIHAG
Trigger: GCCTGCGTGAATGAGACCCAAACGAGGCCCCGAGGG...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS CCA 90 bp GACGGTGTCCACCATTTCCACCAGGACGAACATCCCGGCCTGCGCTaGGGGCTCTGGGAACAGGAGGGTCAGTCACGCACCAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: DGVHHFHQDEHPGLR*GLWEQEGQSRTRAG
Trigger: CCCGGCCCTGGTGCGTGACTGACCCTCCTGTTCCCAGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTGGAAATGGTGGACACCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000420561.1
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCAGGCTGGCGGTGAGGTaGCACGGGGCGGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLRLAVR*HGAVSG
Trigger: CCCCGAGACCGCCCCGTGCAACCTCACCGCCAGCCT...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACGAATCCCCGAGCCCCTaGGTCCCGTCCCAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHESPSP*VPSQSL
Trigger: CAGCGACTGGGACGGGACCAAGGGGCTCGGGGATTC...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CTCGGGGCCTCGTTTGGGTCTCATTCACGCAGGCTTCACTTGCCCTTAGGCAGCCACAGCCGCTCGCGCTaGCGCGACTGCGGGCGAGAT +
Preference number: 5 (lower is better)
Translates to: LGASFGSHSRRLHLPLGSHSRSR*RDCGRD
Trigger: ATCTCGCCCGCAGTCGCGCAAGCGCGAGCGGCTGTG...GCTGCCTAAGGGCAAGTGAAGCCTGCGTGAATGAGACCCAAACGAGGCCCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396504.6
CDS-3UTR CAA 90 bp CAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAAGGCTGGCGGTGAGGTaGCACGGGGCGGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: QGPGRVFSVKVSGGPTATRLAVR*HGAVSG
Trigger: CCCCGAGACCGCCCCGTGCAACCTCACCGCCAGCCT...TGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CTCGGGGCCTCGTTTGGGTCTCATTCACGCAGGCTTCACTTGCCCTTAGGCAGCGAATCCCCGAGCCCCTaGGTCCCGTCCCAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: LGASFGSHSRRLHLPLGSESPSP*VPSQSL
Trigger: CAGCGACTGGGACGGGACCAAGGGGCTCGGGGATTC...GCTGCCTAAGGGCAAGTGAAGCCTGCGTGAATGAGACCCAAACGAGGCCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355209.9
CDS-3UTR CAA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGATGCAGAGTCCCACGTaGTACACGACCTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGMQSPT*YTTLLA
Trigger: GGCCAACAAGGTCGTGTACAACGTGGGACTCTGCAT...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
CDS-3UTR CAA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCTCCGCTTCGTCGAACTaGGCTGGCTGCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPSASSN*AGCCSD
Trigger: GTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGA...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCGTCACTGCCCGGGCATaGTCCCAGGCAGCAGGATTA +
Preference number: 5 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPVTARA*SQAAGL
Trigger: TAATCCTGCTGCCTGGGACAATGCCCGGGCAGTGAC...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp TCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCTCGGGGCCTCGTTaGGGTCTCATTCACGCAGGC +
Preference number: 5 (lower is better)
Translates to: SSQPAIPPSRRLVGSTVQPSGPR*GLIHAG
Trigger: GCCTGCGTGAATGAGACCCAAACGAGGCCCCGAGGG...CTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp TTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCTCCGCTTCGTCGAACTaGGCTGGCTGCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FTAGHTTFPQAGRVHCPASASSN*AGCCSD
Trigger: GTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGA...GGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCACGGAGCCTCCTTCTTaGGCAGCTCCTCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: SQPAIPPSRRLVGSTVQPTEPPS*AAPHWK
Trigger: CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGT...GGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp ACTCCCACACCCACACCTGCTCCGCTTCGTCGAACTTGGCTGGCTGCTGCAGTGTGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: TPTPTPAPLRRTWLAAAVWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...CACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGAGCAGGTGTGGGTGTGGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGAGCACCAGCGCACACTaGCTAGGGGCACCCCTAGTG +
Preference number: 5 (lower is better)
Translates to: SSQPAIPPSRRLVGSTVQSTSAH*LGAPLV
Trigger: CACTAGGGGTGCCCCTAGCAAGTGTGCGCTGGTGCT...CTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTCTGCCTCTGGAGGGCTaGTCATCCACCCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LLSSQPAIPPSRRLVGSTLPLEG*SSTPPG
Trigger: CCCTGGAGGGGTGGATGACAAGCCCTCCAGAGGCAG...AGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS CCA 90 bp GAGGCCCAGAGAAGAGAAGTCTGCCGCTGTCACCGGGTCAATTCCTaGCCGATTCAGGATGAGGCCCCACGTCTCCCAGCCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: EAQRREVCRCHRVNS*PIQDEAPRLPASRT
Trigger: AGTCCTGGAGGCTGGGAGACGTGGGGCCTCATCCTGAATCGGCCAGGAATTGACCCGGTGACAGCGGCAGACTTCTCTTCTCTGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS-3UTR CAA 90 bp GCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCTCCGCTTCGTCGAACTaGGCTGGCTGCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: AAVVFTAGHTTFPQAGRVSASSN*AGCCSD
Trigger: GTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGA...GACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTTGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: LLSSQPAIPPSRRLVGSTWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...AGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTTGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCCCAGGGTCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATC +
Preference number: 5 (lower is better)
Translates to: AGHTTFPQAGRVHCPAPGSGLQP*IFPMRI
Trigger: GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...CCCTGGGGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGCTGCCCGTGGCTGAGTaGGGCCTGGTTCTAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SAAVVFTAGHTTFPQAGRLPVAE*GLVLGC
Trigger: ACAGCCTAGAACCAGGCCCAACTCAGCCACGGGCAG...CCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp TCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGCTTCACAGATGCATCTaGTGTGGGGCCCGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: SAAVVFTAGHTTFPQAGRLHRCI*CGARRP
Trigger: CGGCCTCCGGGCCCCACACAAGATGCATCTGTGAAG...CCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CAAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCTGCCTCTGGAGGGCTaGTCATCCACCCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: QAGGHSWPCLTVQLETLSLPLEG*SSTPPG
Trigger: CCCTGGAGGGGTGGATGACAAGCCCTCCAGAGGCAG...AGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp TCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATGTCCGCTTCGTCGAACTaGGCTGGCTGCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: STKLSSTTRKRISSPVSMSASSN*AGCCSD
Trigger: GTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGA...CATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACACGGAGCCTCCTTCTTaGGCAGCTCCTCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHTEPPS*AAPHWK
Trigger: CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGT...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCGGCCTCAGCTGCTGTaGTCTTCACAGCCGGCCATA +
Preference number: 5 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCRPQLL*SSQPAI
Trigger: TATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCG...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CCACAAGCGTGTACGGAGCCTCCTTCTTTGGCAGCTCCTCACTGGAAGTGGTGGTGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: PQACTEPPSLAAPHWKWWWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...CCACCACTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGTACACGCTTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGCCTGTCTGTGCCGTTTGTaGTCAAGTCCAGGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: FTAGHTTFPQAGRVHCPACLCRL*SSPGSR
Trigger: CCTGGACCCTGGACTTGACAACAAACGGCACAGACA...GGCTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GCTGAGCTGGGCCCTGTGGGGGACGTGTCAACAAAGCTCTCGTCCACCACCCGGCAGCGAAAATGGACTTaGGTGTGTGATGCGCCATCC +
Preference number: 5 (lower is better)
Translates to: AELGPVGDVSTKLSSTTRQRKWT*VCDAPS
Trigger: GGATGGCGCATCACACACCAAAGTCCATTTTCGCTG...CCGGGTGGTGGACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CAAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTTCTCAGAGTTGGGGGTaGGAGTCAACCCGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: QAGGHSWPCLTVQLETLSSQSWG*ESTRGP
Trigger: AGGGCCCCGGGTTGACTCCAACCCCCAACTCTGAGA...AGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCACTGCCCGGGCATaGTCCCAGGCAGCAGGATTA +
Preference number: 5 (lower is better)
Translates to: LLSSQPAIPPSRRLVGSTVTARA*SQAAGL
Trigger: TAATCCTGCTGCCTGGGACAATGCCCGGGCAGTGAC...AGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp GTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCACAGTGTTCCCAAGTCTaGTCTGAGGCGTCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: VFTAGHTTFPQAGRVHCPQCSQV*SEASGP
Trigger: TGGCCCTGACGCCTCAGACAAGACTTGGGAACACTG...TGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS TCA 90 bp GAGTGCCCAAGGGATGGCAGGCTTGGCGCCTGCGCTCTGGGAGCCTaGACCGTCTCAATGGGCCTCTCACCATCTCCTATACACTGGTTT +
Preference number: 5 (lower is better)
Translates to: ECPRDGRLGACALGA*TVSMGLSPSPIHWF
Trigger: AAACCAGTGTATAGGAGATGGTGAGAGGCCCATTGAGACGGTTCAGGCTCCCAGAGCGCAGGCGCCAAGCCTGCCATCCCTTGGGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS GCA 90 bp CAGAGATGGGCCAGCCCAGCCCAGGCCCCCAGTAACCAACCAGTCTaGCAACCTTCAGAATGTGAGACCGTCCTAGATTGTCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: QRWASPAQAPSNQPV*QPSECETVLDCPAP
Trigger: TGGGGCTGGACAATCTAGGACGGTCTCACATTCTGAAGGTTGGCAGACTGGTTGGTTACTGGGGGCCTGGGCTGGGCTGGCCCATCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS-3UTR CAA 90 bp CAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGATGCAGAGTCCCACGTaGTACACGACCTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QLLLSSQPAIPPSRRLVGMQSPT*YTTLLA
Trigger: GGCCAACAAGGTCGTGTACAACGTGGGACTCTGCAT...CCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CAA 90 bp AAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCTCCGCTTCGTCGAACTaGGCTGGCTGCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: KLVGTPGLASLSSSRHYLSASSN*AGCCSD
Trigger: GTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGA...GAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGACGGAGCCTCCTTCTTaGGCAGCTCCTCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: SAAVVFTAGHTTFPQAGRTEPPS*AAPHWK
Trigger: CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGT...CCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTGTCTGTGCCGTTTGTaGTCAAGTCCAGGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QLLLSSQPAIPPSRRLVGCLCRL*SSPGSR
Trigger: CCTGGACCCTGGACTTGACAACAAACGGCACAGACA...CCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCATGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VFTAGHTTFPQAGRVHCPWCLCR*LSSPGS
Trigger: GGACCCTGGACTTGACAACAAACGGCACAGACACCA...TGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATGGTCTCAGAGTTGGGGGTaGGAGTCAACCCGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: HSHRWIHHCSEGGAGPRWSQSWG*ESTRGP
Trigger: AGGGCCCCGGGTTGACTCCAACCCCCAACTCTGAGA...CCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp AGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCAGCACCAGCGCACACTaGCTAGGGGCACCCCTAGTG +
Preference number: 5 (lower is better)
Translates to: SPGSRKGLFSQGQWRPNSSTSAH*LGAPLV
Trigger: CACTAGGGGTGCCCCTAGCAAGTGTGCGCTGGTGCT...GCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CAGAAAATGAAGCTCTCCAGGCTAGTCAGGCCCCCGATGACCGAATGCCGCCTGTCACGCAGGCTTCACTaGCCCTTAGGCAGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: QKMKLSRLVRPPMTECRLSRRLH*PLGSRR
Trigger: TCGCCTGCTGCCTAAGGGCAAGTGAAGCCTGCGTGA...CAGGCGGCATTCGGTCATCGGGGGCCTGACTAGCCTGGAGAGCTTCATTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CCCTGTGGGGGACGTGTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCGTGGGCCCAGTACCTaGTTGGCCAACTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PCGGRVNKALVHHPEADLRGPST*LANFLF
Trigger: GAACAAGAAGTTGGCCAACAAGGTACTGGGCCCACG...GAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGACACGTCCCCCACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS TCA 90 bp AAGCCTAGAGAGACTCCTGCCCCCACAGTGTTCCCAAGTCTTGTCTaGGGCGTCAGGGCCACTGTTACCGTGCACTCCTTCTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: KPRETPAPTVFPSLV*GVRATVTVHSFWAA
Trigger: TGCAGCCCAGAAGGAGTGCACGGTAACAGTGGCCCTGACGCCTCAGACAAGACTTGGGAACACTGTGGGGGCAGGAGTCTCTCTAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS-3UTR CAA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTCGGCAATGGAGTCGTaGAGCTTCCTCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHSAMES*SFLSNC
Trigger: GCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCGA...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTATGCAGAGTCCCACGTaGTACACGACCTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCMQSPT*YTTLLA
Trigger: GGCCAACAAGGTCGTGTACAACGTGGGACTCTGCAT...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
CDS-3UTR CAA 90 bp CTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTATGCAGAGTCCCACGTaGTACACGACCTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLSSQPAIPPSRRLVGSTMQSPT*YTTLLA
Trigger: GGCCAACAAGGTCGTGTACAACGTGGGACTCTGCAT...AGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
CDS-3UTR CAA 90 bp GTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGTCCGCTTCGTCGAACTaGGCTGGCTGCTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: VSGGPTATATDGSITAVKSASSN*AGCCSD
Trigger: GTCACTGCAGCAGCCAGCCAAGTTCGACGAAGCGGA...CTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATGGCGGCCTCAGCTGCTGTaGTCTTCACAGCCGGCCATA +
Preference number: 5 (lower is better)
Translates to: HSHRWIHHCSEGGAGPRWRPQLL*SSQPAI
Trigger: TATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCG...CCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTTGTCTGTGCCGTTTGTaGTCAAGTCCAGGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VVFTAGHTTFPQAGRVHCCLCRL*SSPGSR
Trigger: CCTGGACCCTGGACTTGACAACAAACGGCACAGACA...ACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GTCAACAAAGCTCTCGTCCACCACCCGGAAGCGGATCTCCTCGCCGGTGTCCATTGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VNKALVHHPEADLLAGVHWCLCR*LSSPGS
Trigger: GGACCCTGGACTTGACAACAAACGGCACAGACACCA...ATGGACACCGGCGAGGAGATCCGCTTCCGGGTGGTGGACGAGAGCTTTGTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACCAGCGAAAATGGACTTaGGTGTGTGATGCGCCATCC +
Preference number: 5 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHQRKWT*VCDAPS
Trigger: GGATGGCGCATCACACACCAAAGTCCATTTTCGCTG...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GGAAGCGGATCTCCTCGCCGGTGTCCATGTAGAGGTCGTGTGCTCCTTCCTCCGCAGCGAAAATGGACTTaGGTGTGTGATGCGCCATCC +
Preference number: 5 (lower is better)
Translates to: GSGSPRRCPCRGRVLLPPQRKWT*VCDAPS
Trigger: GGATGGCGCATCACACACCAAAGTCCATTTTCGCTG...CGGAGGAAGGAGCACACGACCTCTACATGGACACCGGCGAGGAGATCCGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CAAGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTAGTGGCTTCTCAGAGTaGGGGGTTGGAGTCAACCCG +
Preference number: 5 (lower is better)
Translates to: QAGGHSWPCLTVQLETLSSGFSE*GVGVNP
Trigger: CGGGTTGACTCCAACCCCCAACTCTGAGAAGCCACT...AGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp GAGACTAATCAGTCATCAGCCAGGACCCAGGCATGTCCTGGGCTCCTGTGTCCATCACGCAGGCTTCACTaGCCCTTAGGCAGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: ETNQSSARTQACPGLLCPSRRLH*PLGSRR
Trigger: TCGCCTGCTGCCTAAGGGCAAGTGAAGCCTGCGTGA...TGGACACAGGAGCCCAGGACATGCCTGGGTCCTGGCTGATGACTGATTAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTAGATGGGAGACATTAAGCTGCTaGCCCACGGCCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: HSHRWIHHCSEGGAGPRWETLSC*PTARAW
Trigger: CCAAGCCCTGGCCGTGGGCAAGCAGCTTAATGTCTC...CCATCTAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR CAA 90 bp TCAGCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGTCGGCAATGGAGTCGTaGAGCTTCCTCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: SAAVVFTAGHTTFPQAGRSAMES*SFLSNC
Trigger: GCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCGA...CCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAACGGAGCCTCCTTCTTaGGCAGCTCCTCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: QGPGRVFSVKVSGGPTATTEPPS*AAPHWK
Trigger: CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGT...TGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp AAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGCGGCCTCAGCTGCTGTaGTCTTCACAGCCGGCCATA +
Preference number: 5 (lower is better)
Translates to: KGLFSQGQWRPNSHSHRWRPQLL*SSQPAI
Trigger: TATGGCCGGCTGTGAAGACAACAGCAGCTGAGGCCG...CCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCCCGTGGCTGAGTaGGGCCTGGTTCTAGGCTGT +
Preference number: 5 (lower is better)
Translates to: FQSRSVEAQQPQPQMDPSLPVAE*GLVLGC
Trigger: ACAGCCTAGAACCAGGCCCAACTCAGCCACGGGCAG...TGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp AGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCAGGAAGGGGGCGCCTaGAGCTTCACAGATGCATCT +
Preference number: 5 (lower is better)
Translates to: RVQEGSFQSRSVEAQQPQQEGGA*SFTDAS
Trigger: AGATGCATCTGTGAAGCTCAAGGCGCCCCCTTCCTG...CTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp ACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGGAGGAGCAGGGCCTACACGTGTCTGAAGACTaGCCTGCCTCTCACCCCTCT +
Preference number: 5 (lower is better)
Translates to: TATATDGSITAVKEEQGLHVSED*PASHPS
Trigger: AGAGGGGTGAGAGGCAGGCAAGTCTTCAGACACGTG...TAGGCCCTGCTCCTCCTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp AGCTGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCATGCAGAGTCCCACGTaGTACACGACCTGCAATTGC +
Preference number: 5 (lower is better)
Translates to: SWWALLALPHCPARDTISMQSPT*YTTCNC
Trigger: GCAATTGCAGGTCGTGTACAACGTGGGACTCTGCAT...GGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS TCA 90 bp ACTGAACTTTGGAACCTTAAAACCGCCAAGCCCAGCCTGGCCTACTaGAAGATGAGACCATGTGGGGCAGAGATGGGCCAGCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: TELWNLKTAKPSLAY*KMRPCGAEMGQPSP
Trigger: TGGGCTGGGCTGGCCCATCTCTGCCCCACATGGTCTCATCTTTCAGTAGGCCAGGCTGGGCTTGGCGGTTTTAAGGTTCCAAAGTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS-3UTR CAA 90 bp GCTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCTTGTACACGACCTTGTaGGCCAACTTCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: AAVVFTAGHTTFPQAGRVLYTTL*ANFLFS
Trigger: GCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACAA...GACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CAA 90 bp CTGCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCTTGTACACGACCTTGTaGGCCAACTTCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LLLSSQPAIPPSRRLVGSLYTTL*ANFLFS
Trigger: GCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACAA...GGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
CDS-3UTR CAA 90 bp GCTGTTGTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTTGTACACGACCTTGTaGGCCAACTTCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: AVVFTAGHTTFPQAGRVHLYTTL*ANFLFS
Trigger: GCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACAA...GTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGACAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
CDS-3UTR CAA 90 bp GTCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAACGTTGTACACGACCTaGTTGGCCAACTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VFTAGHTTFPQAGRVHCPTLYTT*LANFLF
Trigger: GAACAAGAAGTTGGCCAACAAGGTCGTGTACAACGT...TGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
CDS-3UTR CAA 90 bp TCTTCACAGCCGGCCATACCACCTTCCCGCAGGCTGGTAGGGTCCACTGTCCAGACGTTGTACACGACCTaGTTGGCCAACTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SSQPAIPPSRRLVGSTVQTLYTT*LANFLF
Trigger: GAACAAGAAGTTGGCCAACAAGGTCGTGTACAACGT...CTGGACAGTGGACCCTACCAGCCTGCGGGAAGGTGGTATGGCCGGCTGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
CDS-3UTR CAA 90 bp AGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGATGCAGAGTCCCACGTaGTACACGACCTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RVQEGSFQSRSVEAQQPQMQSPT*YTTLLA
Trigger: GGCCAACAAGGTCGTGTACAACGTGGGACTCTGCAT...CTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CAA 90 bp GAGACTAATCAGTCATCAGCCAGGACCCAGGCATGTCCTGGGCTCCTGTGTCCATGTCTGTGCCGTTTGTaGTCAAGTCCAGGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ETNQSSARTQACPGLLCPCLCRL*SSPGSR
Trigger: CCTGGACCCTGGACTTGACAACAAACGGCACAGACA...TGGACACAGGAGCCCAGGACATGCCTGGGTCCTGGCTGATGACTGATTAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp GGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAATGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: GQWRPNSHSHRWIHHCSEWCLCR*LSSPGS
Trigger: GGACCCTGGACTTGACAACAAACGGCACAGACACCA...TTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TGGTGGCATCTGCTGAGCTGGGCCCTGTGGGGGACGTGTCAACAAAGCTCTCGTTCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATC +
Preference number: 5 (lower is better)
Translates to: WWHLLSWALWGTCQQSSRSGLQP*IFPMRI
Trigger: GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...ACGAGAGCTTTGTTGACACGTCCCCCACAGGGCCCAGCTCAGCAGATGCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp AAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGAGTGGCTTCTCAGAGTaGGGGGTTGGAGTCAACCCG +
Preference number: 5 (lower is better)
Translates to: KGLFSQGQWRPNSHSHRWSGFSE*GVGVNP
Trigger: CGGGTTGACTCCAACCCCCAACTCTGAGAAGCCACT...CCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CCACTGCAAACAACCACGTGCCTCTGTCCCCTCGGGGCCTCGTTTGGGTCTCATTGGCTTCTGTCTTCTTaGCCACTGCAAACAACCACG +
Preference number: 5 (lower is better)
Translates to: PLQTTTCLCPLGASFGSHWLLSS*PLQTTT
Trigger: CGTGGTTGTTTGCAGTGGCAAAGAAGACAGAAGCCA...ATGAGACCCAAACGAGGCCCCGAGGGGACAGAGGCACGTGGTTGTTTGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGCTTCACAGATGCATCTaGTGTGGGGCCCGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWLHRCI*CGARRP
Trigger: CGGCCTCCGGGCCCCACACAAGATGCATCTGTGAAG...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS TCA 90 bp GGCTCAAGAGATCCTTCCGCCCTCAGCCTTACAGGCACGCACCACTaGACCTGGATTTGGCTTGACCTTTGGCTACAGAAAACTGAGCCC +
Preference number: 5 (lower is better)
Translates to: GSRDPSALSLTGTHH*TWIWLDLWLQKTEP
Trigger: GGGCTCAGTTTTCTGTAGCCAAAGGTCAAGCCAAATCCAGGTTCAGTGGTGCGTGCCTGTAAGGCTGAGGGCGGAAGGATCTCTTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS GCA 90 bp TCAATATCTCCTTTCACGGTGAAGAAAAGTTCTGAGACATTAAGCTaGTTGCCCACGGCCAGGGCTTGGCATGACCGAGGCCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SISPFTVKKSSETLS*LPTARAWHDRGRAC
Trigger: GCAGGCCCGGCCTCGGTCATGCCAAGCCCTGGCCGTGGGCAAGCAGCTTAATGTCTCAGAACTTTTCTTCACCGTGAAAGGAGATATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS-3UTR CAA 90 bp CTCACTGATGGATCCCACAAGCGTGTACGGAGCCTCCTTCTTTGGCAGCTCCTCTCGGCAATGGAGTCGTaGAGCTTCCTCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: LTDGSHKRVRSLLLWQLLSAMES*SFLSNC
Trigger: GCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCGA...GAGGAGCTGCCAAAGAAGGAGGCTCCGTACACGCTTGTGGGATCCATCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCAACGGAGCCTCCTTCTTaGGCAGCTCCTCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: SFQSRSVEAQQPQPQMDPTEPPS*AAPHWK
Trigger: CTTCCAGTGAGGAGCTGCCAAAGAAGGAGGCTCCGT...TGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp ATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCATGGGCACTCCTGGCCTaGCCTCACTGTCCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: IGVCAVCCQVQGPGRVFSWALLA*PHCPAR
Trigger: TCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA...TGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACATGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: QVQGPGRVFSVKVSGGPTWCLCR*LSSPGS
Trigger: GGACCCTGGACTTGACAACAAACGGCACAGACACCA...TGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TGGTGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTACAGCGAAAATGGACTTaGGTGTGTGATGCGCCATCC +
Preference number: 5 (lower is better)
Translates to: WWALLALPHCPARDTISLQRKWT*VCDAPS
Trigger: GGATGGCGCATCACACACCAAAGTCCATTTTCGCTG...TAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TGCCCTGACCTCTGTCCTCTCTACTTACCACCCAAGGTCAAAGGGAAGTGTACCCACGTGTCTGAAGACTaGCCTGCCTCTCACCCCTCT +
Preference number: 5 (lower is better)
Translates to: CPDLCPLYLPPKVKGKCTHVSED*PASHPS
Trigger: AGAGGGGTGAGAGGCAGGCAAGTCTTCAGACACGTG...GGTACACTTCCCTTTGACCTTGGGTGGTAAGTAGAGAGGACAGAGGTCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGAAGGGTGAGCGAACATaGACCTGTCCCAACTTTGGG +
Preference number: 5 (lower is better)
Translates to: QSRSVEAQQPQPQMDPSLKGERT*TCPNFG
Trigger: CCCAAAGTTGGGACAGGTCAATGTTCGCTCACCCTT...CAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp GTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAAGGGCCCAGTACCTTGTaGGCCAACTTCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: VKSRVQEGSFQSRSVEAQGPSTL*ANFLFS
Trigger: GCTGAACAAGAAGTTGGCCAACAAGGTACTGGGCCC...TTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS GCA 90 bp TGGCTTGACCTTTGGCTACAGAAAACTGAGCCCCAAGAAGCCCAATaGCCCAGGGACAGAAGATACCCACCTTTGGTGTGTGATGCGCCA +
Preference number: 5 (lower is better)
Translates to: WLDLWLQKTEPQEAQ*PRDRRYPPLVCDAP
Trigger: TGGCGCATCACACACCAAAGGTGGGTATCTTCTGTCCCTGGGGCATTGGGCTTCTTGGGGCTCAGTTTTCTGTAGCCAAAGGTCAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS-3UTR CAA 90 bp CAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACATCGGCAATGGAGTCGTaGAGCTTCCTCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: QVQGPGRVFSVKVSGGPTSAMES*SFLSNC
Trigger: GCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCGA...TGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCTCGGCAATGGAGTCGTaGAGCTTCCTCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: VVKSRVQEGSFQSRSVEASAMES*SFLSNC
Trigger: GCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCGA...GGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp AAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGTCGGCAATGGAGTCGTaGAGCTTCCTCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: KGLFSQGQWRPNSHSHRWSAMES*SFLSNC
Trigger: GCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCGA...CCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACTCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATC +
Preference number: 5 (lower is better)
Translates to: SRKGLFSQGQWRPNSHSHSGLQP*IFPMRI
Trigger: GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...GTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCTTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GCAGCGAAAATGGACAGACAGGGCCACCGGGTCGAATCTTGCCTTCCTCAGACATCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATC +
Preference number: 5 (lower is better)
Translates to: AAKMDRQGHRVESCLPQTSGLQP*IFPMRI
Trigger: GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...TGTCTGAGGAAGGCAAGATTCGACCCGGTGGCCCTGTCTGTCCATTTTCGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CAA 90 bp GTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCGGCCTAGGATTTGGTTaGCCTGCTGACCTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: VFSVKVSGGPTATATDGSGLGFG*PADLLG
Trigger: ACCTAAGAGGTCAGCAGGCAAACCAAATCCTAGGCC...GGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp GACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCCAGGAAGGGGGCGCCTaGAGCTTCACAGATGCATCT +
Preference number: 5 (lower is better)
Translates to: DCSVSDWCLCRLLSSPGSQEGGA*SFTDAS
Trigger: AGATGCATCTGTGAAGCTCAAGGCGCCCCCTTCCTG...GGACCCTGGACTTGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp AATCCCAAACACAGGCTTCCACGATGCCGTCAACCATTTAGTCGGCCAACATGCTGGACCTCTCACCCTTaGGTGTGTGATGCGCCATCC +
Preference number: 5 (lower is better)
Translates to: NPKHRLPRCRQPFSRPTCWTSHP*VCDAPS
Trigger: GGATGGCGCATCACACACCAAAGGGTGAGAGGTCCA...GCATGTTGGCCGACTAAATGGTTGACGGCATCGTGGAAGCCTGTGTTTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CAA 90 bp GTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCACTGCAGTGAAGTTGTACACGACCTTGTaGGCCAACTTCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: VSGGPTATATDGSITAVKLYTTL*ANFLFS
Trigger: GCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACAA...CTTCACTGCAGTGATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CAA 90 bp GCAGCGAAAATGGACAGACAGGGCCACCGGGTCGAATCTTGCCTTCCTCAGACATTGTACACGACCTTGTaGGCCAACTTCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: AAKMDRQGHRVESCLPQTLYTTL*ANFLFS
Trigger: GCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACAA...TGTCTGAGGAAGGCAAGATTCGACCCGGTGGCCCTGTCTGTCCATTTTCGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CAA 90 bp TGGGCACTCCTGGCCTTGCCTCACTGTCCAGCTCGAGACACTATCTCCTTAGCAACGTTGTACACGACCTaGTTGGCCAACTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: WALLALPHCPARDTISLATLYTT*LANFLF
Trigger: GAACAAGAAGTTGGCCAACAAGGTCGTGTACAACGT...TGCTAAGGAGATAGTGTCTCGAGCTGGACAGTGAGGCAAGGCCAGGAGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CAA 90 bp TCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCAAAGCCTAGAGAGACTTaGGTGTGTGATGCGCCATCC +
Preference number: 5 (lower is better)
Translates to: SFQSRSVEAQQPQPQMDPKPRET*VCDAPS
Trigger: GGATGGCGCATCACACACCAAAGTCTCTCTAGGCTT...TGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337566.9
CDS-3UTR CAA 90 bp TCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCACAGCGAAAATGGACTTaGGTGTGTGATGCGCCATCC +
Preference number: 5 (lower is better)
Translates to: SFQSRSVEAQQPQPQMDPQRKWT*VCDAPS
Trigger: GGATGGCGCATCACACACCAAAGTCCATTTTCGCTG...TGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp GTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCTGGCTTCTGTCTTCTTaGCCACTGCAAACAACCACG +
Preference number: 5 (lower is better)
Translates to: VFSVKVSGGPTATATDGSWLLSS*PLQTTT
Trigger: CGTGGTTGTTTGCAGTGGCAAAGAAGACAGAAGCCA...GGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS-3UTR CAA 90 bp CCACCGGGTCGAATCTTGCCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTCCACCGGGTCGAATCTaGCCTTCCTCAGACAGGTTT +
Preference number: 5 (lower is better)
Translates to: PPGRILPSSDRFNPKHRLPPGRI*PSSDRF
Trigger: AAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTGG...AAGCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTCGACCCGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS TCA 90 bp TGCACACCCTTTTGCAATGTGACTGCAGTTTCTCCCACCCAGAGGTaGAGTCTATTTCTCCATCCCCTCACCCTAGCCAACGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: CTPFCNVTAVSPTQR*SLFLHPLTLANGME
Trigger: TTCCATCCCGTTGGCTAGGGTGAGGGGATGGAGAAATAGACTTCACCTCTGGGTGGGAGAAACTGCAGTCACATTGCAAAAGGGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS-3UTR CAA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGAACGTTGTACACGACCTaGTTGGCCAACTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: RVFSVKVSGGPTATATDGTLYTT*LANFLF
Trigger: GAACAAGAAGTTGGCCAACAAGGTCGTGTACAACGT...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CAA 90 bp GAATCTTGCCTTCCTCAGACAGGTTTAATCCCAAACACAGGCTTCCACGATGCCATGCAGAGTCCCACGTaGTACACGACCTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: ESCLPQTGLIPNTGFHDAMQSPT*YTTLLA
Trigger: GGCCAACAAGGTCGTGTACAACGTGGGACTCTGCAT...GGCATCGTGGAAGCCTGTGTTTGGGATTAAACCTGTCTGAGGAAGGCAAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CAA 90 bp TCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATC +
Preference number: 5 (lower is better)
Translates to: SFQSRSVEAQQPQPQMDPSGLQP*IFPMRI
Trigger: GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...TGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp CTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATTTGTACACGACCTTGTaGGCCAACTTCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LFSQGQWRPNSHSHRWIHLYTTL*ANFLFS
Trigger: GCTGAACAAGAAGTTGGCCAACAAGGTCGTGTACAA...ATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CAA 90 bp CTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGATCCATACGTTGTACACGACCTaGTTGGCCAACTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LFSQGQWRPNSHSHRWIHTLYTT*LANFLF
Trigger: GAACAAGAAGTTGGCCAACAAGGTCGTGTACAACGT...ATGGATCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
CDS-3UTR CAA 90 bp ATTGGTGTCTGTGCCGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGGCCTAGGATTTGGTTaGCCTGCTGACCTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: IGVCAVCCQVQGPGRVFSGLGFG*PADLLG
Trigger: ACCTAAGAGGTCAGCAGGCAAACCAAATCCTAGGCC...TGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACGGCACAGACACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS TCA 90 bp GTGATGCGCCATCCCCAGGGAATACATAGGCATCCTCCAGTTTGGTaGTATCAAACAGACAAATGCAGAGTCCCACGTTGTACACGACCT +
Preference number: 5 (lower is better)
Translates to: VMRHPQGIHRHPPVW*YQTDKCRVPRCTRP
Trigger: AGGTCGTGTACAACGTGGGACTCTGCATTTGTCTGTTTGATATCACCAAACTGGAGGATGCCTATGTATTCCCTGGGGATGGCGCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
ENST00000442616.1
ENST00000483837.1
CDS GCA 90 bp GTGATCACCTTCCATTCCTGGATGCACACCCTTTTGCAATGTGACTaGAGTTTCTCCCACCCAGAGGTGAAGTCTATTTCTCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: VITFHSWMHTLLQCD*SFSHPEVKSISPSP
Trigger: AGGGGATGGAGAAATAGACTTCACCTCTGGGTGGGAGAAACTGCAGTCACATTGCAAAAGGGTGTGCATCCAGGAATGGAAGGTGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS-3UTR CAA 90 bp TTAATCCCAAACACAGGCTTCCACGATGCCGTCAACCATTTAGTCGGCCAACATTCGGCAATGGAGTCGTaGAGCTTCCTCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: LIPNTGFHDAVNHLVGQHSAMES*SFLSNC
Trigger: GCAGTTTGAGAGGAAGCTCAACGACTCCATTGCCGA...ATGTTGGCCGACTAAATGGTTGACGGCATCGTGGAAGCCTGTGTTTGGGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CAA 90 bp GAGACGTGCACTCCTTCTGGGCTGCAGCCTTTGATCTTCCCAATGAGAATCTCAACGTTGTACACGACCTaGTTGGCCAACTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: ETCTPSGLQPLIFPMRISTLYTT*LANFLF
Trigger: GAACAAGAAGTTGGCCAACAAGGTCGTGTACAACGT...TGAGATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442616.1
CDS-3UTR CAA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCATGGTGTCTGTGCCGTTaGTTGTCAAGTCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SKTSDCSVSDWCLCRLLSWCLCR*LSSPGS
Trigger: GGACCCTGGACTTGACAACAAACGGCACAGACACCA...TGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp AGGGTCTTTTCAGTCAAGGTCAGTGGAGGCCCAACAGCCACAGCCACAGATGGACAAGCCCATTTTCTTTaGATCCCCTTCAATATCTCC +
Preference number: 5 (lower is better)
Translates to: RVFSVKVSGGPTATATDGQAHFL*IPFNIS
Trigger: GGAGATATTGAAGGGGATCAAAAGAAAATGGGCTTG...TCCATCTGTGGCTGTGGCTGTTGGGCCTCCACTGACCTTGACTGAAAAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS TCA 90 bp ACTGACCGACAGAATAGGGAGAAACAATCCACGCTGATAAGTCACTaGGTGCTCGTTAGGTGCCAAGGCTCTGTCCTAAGAGCTTTCATG +
Preference number: 5 (lower is better)
Translates to: TDRQNREKQSTLISH*VLVRCQGSVLRAFM
Trigger: CATGAAAGCTCTTAGGACAGAGCCTTGGCACCTAACGAGCACTCAGTGACTTATCAGCGTGGATTGTTTCTCCCTATTCTGTCGGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS-3UTR CAA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCAAAGGGTGAGCGAACATaGACCTGTCCCAACTTTGGG +
Preference number: 5 (lower is better)
Translates to: SKTSDCSVSDWCLCRLLSKGERT*TCPNFG
Trigger: CCCAAAGTTGGGACAGGTCAATGTTCGCTCACCCTT...TGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355209.9
ENST00000396504.6
CDS TCA 90 bp CTGCAGCCTTTGATCTTCCCAATGAGAATCTCATCTAGGAATGGATaGAACACCACGCAGCGAAAATGGACTTTGGTGTGTGATGCGCCA +
Preference number: 5 (lower is better)
Translates to: LQPLIFPMRISSRNG*NTTQRKWTLVCDAP
Trigger: TGGCGCATCACACACCAAAGTCCATTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGAGATTCTCATTGGGAAGATCAAAGGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
CDS-3UTR CAA 90 bp TCCAAAACCAGTGACTGTTCTGTGAGTGATTGGTGTCTGTGCCGTTTGTTGTCATCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATC +
Preference number: 5 (lower is better)
Translates to: SKTSDCSVSDWCLCRLLSSGLQP*IFPMRI
Trigger: GATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGA...TGACAACAAACGGCACAGACACCAATCACTCACAGAACAGTCACTGGTTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355209.9
ENST00000396504.6
ENST00000431534.5
ENST00000432789.1
CDS TCA 90 bp CTGCAGCCTTTGATCTTCCCAATGAGAATCTCATCTAGGAATGGATaGAACACCACGCAGCGAAAATGGACTTGTTGGCCAACTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LQPLIFPMRISSRNG*NTTQRKWTCWPTSC
Trigger: ACAAGAAGTTGGCCAACAAGTCCATTTTCGCTGCGTGGTGTTTCATCCATTCCTAGATGAGATTCTCATTGGGAAGATCAAAGGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420561.1
CDS-3UTR CAA 90 bp CGTTTGTTGTCAAGTCCAGGGTCCAGGAAGGGTCTTTTCAGTCAAGGTCAGTGGGTACACGACCTGCAATaGCAAAGTAATTTAGAATTG +
Preference number: 5 (lower is better)
Translates to: RLLSSPGSRKGLFSQGQWVHDLQ*QSNLEL
Trigger: CAATTCTAAATTACTTTGCAATTGCAGGTCGTGTAC...CCACTGACCTTGACTGAAAAGACCCTTCCTGGACCCTGGACTTGACAACAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CCA 90 bp TCCCACGTTGTACACGACCTGCAATTGCAAAGTAATTTAGAATTGTaGAATCTAACACTTCCAGTTACAACTCCCTTTTTCAAGCCCATT +
Preference number: 5 (lower is better)
Translates to: SHVVHDLQLQSNLEL*NLTLPVTTPFFKPI
Trigger: AATGGGCTTGAAAAAGGGAGTTGTAACTGGAAGTGTTAGATTCCACAATTCTAAATTACTTTGCAATTGCAGGTCGTGTACAACGTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS GCA 72 bp GGCCAGAGGGAGGCACTCTCCGTCCACAGCTCCGGGTaGGCGCCCGCGCCGCGAGACCCCGCCACGCCACGC +
Preference number: 6 (lower is better)
Translates to: GQREALSVHSSG*APAPRDPATPR
Trigger: GCGTGGCGTGGCGGGGTCTCGCGGCGCGGGCGCGCACCCGGAGCTGTGGACGGAGAGTGCCTCCCTCTGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000420561.1
ENST00000431534.5
ENST00000432789.1
CDS GCA 72 bp GCCAGTGGGCGGCGCTCGCTCTCCCACGCCAAGGCCTaGCCGCGAGCCGTGGGCCCAGTACCTTGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: ASGRRSLSHAKA*PRAVGPVPCWP
Trigger: TGGCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGGCCTTGGCGTGGGAGAGCGAGCGCCGCCCACTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CCA 72 bp CACCAGGACGAACATCCCGGCCTGCGCTGGGGGCTCTaGGAACAGGAGGGTCAGTCACGCACCAGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: HQDEHPGLRWGL*EQEGQSRTRAG
Trigger: CCCGGCCCTGGTGCGTGACTGACCCTCCTGTTCCCAGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000420561.1
ENST00000431534.5
ENST00000432789.1
CDS TCA 72 bp CGGAGGGAGGCCTGGGGCAGGCTGAGAATTGCGCTCTaGGTGCCCAAGGGATGGCAGGCTTGGCGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: RREAWGRLRIAL*VPKGWQAWRLR
Trigger: GCGCAGGCGCCAAGCCTGCCATCCCTTGGGCACTCAGAGCGCAATTCTCAGCCTGCCCCAGGCCTCCCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CCA 72 bp CACCATTTCCACCAGGACGAACATCCCGGCCTGCGCTaGGGGCTCACGCACCACGCACCGCGCACAGCCGCT +
Preference number: 6 (lower is better)
Translates to: HHFHQDEHPGLR*GLTHHAPRTAA
Trigger: AGCGGCTGTGCGCGGTGCGTGGTGCGTGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTGGAAATGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396504.6
ENST00000442616.1
ENST00000483837.1
CDS GCA 72 bp GTGTCCACCATTTCCACCAGGACGAACATCCCGGCCTaGGCTGGGGGCTCACGCACCACGCACCGCGCACAG +
Preference number: 6 (lower is better)
Translates to: VSTISTRTNIPA*AGGSRTTHRAQ
Trigger: CTGTGCGCGGTGCGTGGTGCGTGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTGGAAATGGTGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396504.6
ENST00000442616.1
ENST00000483837.1
CDS CCA 72 bp TCTGAGACATTAAGCTGCTTGCCCACGGCCAGGGCTTaGCATGACCGAGGCCGGGCCTGCGGCCAGTGGGCG +
Preference number: 6 (lower is better)
Translates to: SETLSCLPTARA*HDRGRACGQWA
Trigger: CGCCCACTGGCCGCAGGCCCGGCCTCGGTCATGCCAAGCCCTGGCCGTGGGCAAGCAGCTTAATGTCTCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS GCA 72 bp ACTCAGGCGGAGGGAGGCCTGGGGCAGGCTGAGAATTaGGCTCTGAGTGCCCAAGGGATGGCAGGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: TQAEGGLGQAEN*ALSAQGMAGLA
Trigger: CGCCAAGCCTGCCATCCCTTGGGCACTCAGAGCGCAATTCTCAGCCTGCCCCAGGCCTCCCTCCGCCTGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS TCA 72 bp CCGCTGTCACCGGGTCAATTCCTGGCCGATTCAGGATaGGGCCCCACGTCTCCCAGCCTCCAGGACTCCCAC +
Preference number: 6 (lower is better)
Translates to: PLSPGQFLADSG*GPTSPSLQDSH
Trigger: GTGGGAGTCCTGGAGGCTGGGAGACGTGGGGCCTCATCCTGAATCGGCCAGGAATTGACCCGGTGACAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CCA 72 bp CACCATTTCCACCAGGACGAACATCCCGGCCTGCGCTaGGGGCTCTGGGAACAGGAGGGTCAGTCACGCACC +
Preference number: 6 (lower is better)
Translates to: HHFHQDEHPGLR*GLWEQEGQSRT
Trigger: GGTGCGTGACTGACCCTCCTGTTCCCAGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTGGAAATGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000420561.1
ENST00000431534.5
ENST00000432789.1
CDS CCA 72 bp GCTCGCTCTCCCACGCCAAGGCCTGCCCGCGAGCCGTaGGCCCAGTACCTTGTTGGCCAACTTCTTGTTCAG +
Preference number: 6 (lower is better)
Translates to: ARSPTPRPAREP*AQYLVGQLLVQ
Trigger: CTGAACAAGAAGTTGGCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGGCCTTGGCGTGGGAGAGCGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CAA 90 bp GGGCAGGCTGAGAATTGCGCTCTGAGTGCCCAAGGGATGGCAGGCTaGGCGCCTGCGCTCTGGGAGCCTGAACCGTCTCAATGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: GQAENCALSAQGMAG*APALWEPEPSQWAS
Trigger: AGAGGCCCATTGAGACGGTTCAGGCTCCCAGAGCGCAGGCGCCAAGCCTGCCATCCCTTGGGCACTCAGAGCGCAATTCTCAGCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CAA 72 bp CGCCAAGGCCTGCCCGCGAGCCGTGGGCCCAGTACCTaGTTGGCCAACTTCTTGTTCAGCTCCTCGGCAATG +
Preference number: 6 (lower is better)
Translates to: RQGLPASRGPST*LANFLFSSSAM
Trigger: CATTGCCGAGGAGCTGAACAAGAAGTTGGCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGGCCTTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CAA 90 bp CTCCCACGCCAAGGCCTGCCCGCGAGCCGTGGGCCCAGTACCTTGTaGGCCAACTTCTTGTTCAGCTCCTCGGCAATGGAGTCGTTGAGC +
Preference number: 6 (lower is better)
Translates to: LPRQGLPASRGPSTL*ANFLFSSSAMESLS
Trigger: GCTCAACGACTCCATTGCCGAGGAGCTGAACAAGAAGTTGGCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGGCCTTGGCGTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CAA 90 bp GCTCTCCCACGCCAAGGCCTGCCCGCGAGCCGTGGGCCCAGTACCTaGTTGGCCAACTTCTTGTTCAGCTCCTCGGCAATGGAGTCGTTG +
Preference number: 6 (lower is better)
Translates to: ALPRQGLPASRGPST*LANFLFSSSAMESL
Trigger: CAACGACTCCATTGCCGAGGAGCTGAACAAGAAGTTGGCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGGCCTTGGCGTGGGAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CAA 72 bp GAGAATTGCGCTCTGAGTGCCCAAGGGATGGCAGGCTaGGCGCCTGCGCTCTGGGAGCCTGAACCGTCTCAA +
Preference number: 6 (lower is better)
Translates to: ENCALSAQGMAG*APALWEPEPSQ
Trigger: TTGAGACGGTTCAGGCTCCCAGAGCGCAGGCGCCAAGCCTGCCATCCCTTGGGCACTCAGAGCGCAATTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS TCA 72 bp AGGGATGGCAGGCTTGGCGCCTGCGCTCTGGGAGCCTaGACCGTCTCAATGGGCCTCTCACCATCTCCTATA +
Preference number: 6 (lower is better)
Translates to: RDGRLGACALGA*TVSMGLSPSPI
Trigger: TATAGGAGATGGTGAGAGGCCCATTGAGACGGTTCAGGCTCCCAGAGCGCAGGCGCCAAGCCTGCCATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CCA 72 bp AAGGCCTGCCCGCGAGCCGTGGGCCCAGTACCTTGTTaGCCAACTTCTTGTTCAGCTCCTCGGCAATGGAGT +
Preference number: 6 (lower is better)
Translates to: KACPRAVGPVPC*PTSCSAPRQWS
Trigger: ACTCCATTGCCGAGGAGCTGAACAAGAAGTTGGCCAACAAGGTACTGGGCCCACGGCTCGCGGGCAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS TCA 72 bp GAGACTCCTGCCCCCACAGTGTTCCCAAGTCTTGTCTaGGGCGTCAGGGCCACTGTTACCGTGCACTCCTTC +
Preference number: 6 (lower is better)
Translates to: ETPAPTVFPSLV*GVRATVTVHSF
Trigger: GAAGGAGTGCACGGTAACAGTGGCCCTGACGCCTCAGACAAGACTTGGGAACACTGTGGGGGCAGGAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS GCA 72 bp GTGTCCACCATTTCCACCAGGACGAACATCCCGGCCTaGGCTGGGGGCTCAATAAGAAACCTCTGTCCACCC +
Preference number: 6 (lower is better)
Translates to: VSTISTRTNIPA*AGGSIRNLCPP
Trigger: GGGTGGACAGAGGTTTCTTATTGAGCCCCCAGCGCAGGCCGGGATGTTCGTCCTGGTGGAAATGGTGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407461.5
CDS CAA 90 bp CGAAGAAGCCTAGAGAGACTCCTGCCCCCACAGTGTTCCCAAGTCTaGTCTGAGGCGTCAGGGCCACTGTTACCGTGCACTCCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: RRSLERLLPPQCSQV*SEASGPLLPCTPSG
Trigger: CCCAGAAGGAGTGCACGGTAACAGTGGCCCTGACGCCTCAGACAAGACTTGGGAACACTGTGGGGGCAGGAGTCTCTCTAGGCTTCTTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS GCA 72 bp GCCAGCCCAGCCCAGGCCCCCAGTAACCAACCAGTCTaGCAACCTTCAGAATGTGAGACCGTCCTAGATTGT +
Preference number: 6 (lower is better)
Translates to: ASPAQAPSNQPV*QPSECETVLDC
Trigger: ACAATCTAGGACGGTCTCACATTCTGAAGGTTGGCAGACTGGTTGGTTACTGGGGGCCTGGGCTGGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CAA 72 bp CTAGAGAGACTCCTGCCCCCACAGTGTTCCCAAGTCTaGTCTGAGGCGTCAGGGCCACTGTTACCGTGCACT +
Preference number: 6 (lower is better)
Translates to: LERLLPPQCSQV*SEASGPLLPCT
Trigger: AGTGCACGGTAACAGTGGCCCTGACGCCTCAGACAAGACTTGGGAACACTGTGGGGGCAGGAGTCTCTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431534.5
CDS TCA 72 bp ATGCCCCAGGGACAGAAGATACCCACCTTTGGTGTGTaGTGCGCCATCCCCAGGGAATACATAGGCATCCTC +
Preference number: 6 (lower is better)
Translates to: MPQGQKIPTFGV*CAIPREYIGIL
Trigger: GAGGATGCCTATGTATTCCCTGGGGATGGCGCATCACACACCAAAGGTGGGTATCTTCTGTCCCTGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS GCA 72 bp CCTTTCACGGTGAAGAAAAGTTCTGAGACATTAAGCTaGTTGCCCACGGCCAGGGCTTGGCATGACCGAGGC +
Preference number: 6 (lower is better)
Translates to: PFTVKKSSETLS*LPTARAWHDRG
Trigger: GCCTCGGTCATGCCAAGCCCTGGCCGTGGGCAAGCAGCTTAATGTCTCAGAACTTTTCTTCACCGTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CAA 72 bp CTGGTGATCACCTTCCATTCCTGGATGCACACCCTTTaGCAATGTGACTGCAGTTTCTCCCACCCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: LVITFHSWMHTL*QCDCSFSHPEV
Trigger: CACCTCTGGGTGGGAGAAACTGCAGTCACATTGCAAAAGGGTGTGCATCCAGGAATGGAAGGTGATCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CAA 72 bp TCCCCTCACCCTAGCCAACGGGATGGAAGCAGAGGCTaGAGAAGTACTTACGCACTGAACTTTGGAACCTTA +
Preference number: 6 (lower is better)
Translates to: SPHPSQRDGSRG*RSTYALNFGTL
Trigger: TAAGGTTCCAAAGTTCAGTGCGTAAGTACTTCTCAAGCCTCTGCTTCCATCCCGTTGGCTAGGGTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS TCA 72 bp CCCTTCAATATCTCCTTTCACGGTGAAGAAAAGTTCTaGGACATTAAGCTGCTTGCCCACGGCCAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: PFNISFHGEEKF*DIKLLAHGQGL
Trigger: CAAGCCCTGGCCGTGGGCAAGCAGCTTAATGTCTCAGAACTTTTCTTCACCGTGAAAGGAGATATTGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CCA 72 bp CTCAATGGGCCTCTCACCATCTCCTATACACTGGTTTaGTCCAGACATGAGAATGAAGAATGCCCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LNGPLTISYTLV*SRHENEECPSP
Trigger: AGGAGAGGGGCATTCTTCATTCTCATGTCTGGACCAAACCAGTGTATAGGAGATGGTGAGAGGCCCATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CCA 72 bp ACCGTCTCAATGGGCCTCTCACCATCTCCTATACACTaGTTTGGTCCAGACATGAGAATGAAGAATGCCCCT +
Preference number: 6 (lower is better)
Translates to: TVSMGLSPSPIH*FGPDMRMKNAP
Trigger: AGGGGCATTCTTCATTCTCATGTCTGGACCAAACCAGTGTATAGGAGATGGTGAGAGGCCCATTGAGACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CAA 72 bp CCACTGTTACCGTGCACTCCTTCTGGGCTGCAGCCTTaGATCTTCCCAATGAGAATCTCATCTAGGAATGGA +
Preference number: 6 (lower is better)
Translates to: PLLPCTPSGLQP*IFPMRISSRNG
Trigger: TCCATTCCTAGATGAGATTCTCATTGGGAAGATCAAAGGCTGCAGCCCAGAAGGAGTGCACGGTAACAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420561.1
ENST00000431534.5
CDS CAA 90 bp TTCCAGGATCTGGTGATCACCTTCCATTCCTGGATGCACACCCTTTaGCAATGTGACTGCAGTTTCTCCCACCCAGAGGTGAAGTCTATT +
Preference number: 6 (lower is better)
Translates to: FQDLVITFHSWMHTL*QCDCSFSHPEVKSI
Trigger: AATAGACTTCACCTCTGGGTGGGAGAAACTGCAGTCACATTGCAAAAGGGTGTGCATCCAGGAATGGAAGGTGATCACCAGATCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS TCA 72 bp CAGAATAGGGAGAAACAATCCACGCTGATAAGTCACTaGGTGCTCGTTAGGTGCCAAGGCTCTGTCCTAAGA +
Preference number: 6 (lower is better)
Translates to: QNREKQSTLISH*VLVRCQGSVLR
Trigger: TCTTAGGACAGAGCCTTGGCACCTAACGAGCACTCAGTGACTTATCAGCGTGGATTGTTTCTCCCTATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS TCA 72 bp CATCCCCAGGGAATACATAGGCATCCTCCAGTTTGGTaGTATCAAACAGACAAATGCAGAGTCCCACGTTGT +
Preference number: 6 (lower is better)
Translates to: HPQGIHRHPPVW*YQTDKCRVPRC
Trigger: ACAACGTGGGACTCTGCATTTGTCTGTTTGATATCACCAAACTGGAGGATGCCTATGTATTCCCTGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337566.9
ENST00000355209.9
ENST00000396504.6
ENST00000407461.5
ENST00000431534.5
ENST00000432789.1
ENST00000442616.1
ENST00000483837.1
CDS GCA 72 bp TTCCATTCCTGGATGCACACCCTTTTGCAATGTGACTaGAGTTTCTCCCACCCAGAGGTGAAGTCTATTTCT +
Preference number: 6 (lower is better)
Translates to: FHSWMHTLLQCD*SFSHPEVKSIS
Trigger: AGAAATAGACTTCACCTCTGGGTGGGAGAAACTGCAGTCACATTGCAAAAGGGTGTGCATCCAGGAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CAA 72 bp ACACAGCTAGTAAGAAGCAGAGCTCAGCTTTTAATCTaGAGGCCACACTCTTACCTACTGTGTCCTACTATC +
Preference number: 6 (lower is better)
Translates to: TQLVRSRAQLLI*RPHSYLLCPTI
Trigger: GATAGTAGGACACAGTAGGTAAGAGTGTGGCCTCAAGATTAAAAGCTGAGCTCTGCTTCTTACTAGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483837.1
CDS CAA 90 bp GAGTCCCACGTTGTACACGACCTGCAATTGCAAAGTAATTTAGAATaGTGGAATCTAACACTTCCAGTTACAACTCCCTTTTTCAAGCCC +
Preference number: 6 (lower is better)
Translates to: ESHVVHDLQLQSNLE*WNLTLPVTTPFFKP
Trigger: GGGCTTGAAAAAGGGAGTTGTAACTGGAAGTGTTAGATTCCACAATTCTAAATTACTTTGCAATTGCAGGTCGTGTACAACGTGGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CAA 90 bp ATCAAACAGACAAATGCAGAGTCCCACGTTGTACACGACCTGCAATaGCAAAGTAATTTAGAATTGTGGAATCTAACACTTCCAGTTACA +
Preference number: 6 (lower is better)
Translates to: IKQTNAESHVVHDLQ*QSNLELWNLTLPVT
Trigger: TGTAACTGGAAGTGTTAGATTCCACAATTCTAAATTACTTTGCAATTGCAGGTCGTGTACAACGTGGGACTCTGCATTTGTCTGTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1
CDS CAA 72 bp ACAAATGCAGAGTCCCACGTTGTACACGACCTGCAATaGCAAAGTAATTTAGAATTGTGGAATCTAACACTT +
Preference number: 6 (lower is better)
Translates to: TNAESHVVHDLQ*QSNLELWNLTL
Trigger: AAGTGTTAGATTCCACAATTCTAAATTACTTTGCAATTGCAGGTCGTGTACAACGTGGGACTCTGCATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432789.1